locus-tag class description LK685_00010 PF04025 Domain of unknown function (DUF370) LK685_00015 PF02463 RecF/RecN/SMC N terminal domain LK685_00025 PF00712 DNA polymerase III beta subunit, N-terminal domain LK685_00025 PF02767 DNA polymerase III beta subunit, central domain LK685_00025 PF02768 DNA polymerase III beta subunit, C-terminal domain LK685_00030 PF00308 Bacterial dnaA protein LK685_00030 PF08299 Bacterial dnaA protein helix-turn-helix LK685_00030 PF11638 DnaA N-terminal domain LK685_00035 PF00468 Ribosomal protein L34 LK685_00040 PF00825 Ribonuclease P LK685_00045 PF02096 60Kd inner membrane protein LK685_00050 PF14804 Jag N-terminus LK685_00050 PF01424 R3H domain LK685_00055 PF12631 MnmE helical domain LK685_00055 PF10396 GTP-binding protein TrmE N-terminus LK685_00055 PF01926 50S ribosome-binding GTPase LK685_00060 PF01134 Glucose inhibited division protein A LK685_00060 PF13932 GidA associated domain LK685_00065 PF02527 rRNA small subunit methyltransferase G LK685_00070 PF17762 HTH domain found in ParB protein LK685_00070 PF02195 ParB-like nuclease domain LK685_00075 PF06713 Bacterial PH domain LK685_00080 PF13614 AAA domain LK685_00085 PF17762 HTH domain found in ParB protein LK685_00085 PF02195 ParB-like nuclease domain LK685_00090 PF06866 Protein of unknown function (DUF1256) LK685_00100 PF06107 Bacterial protein of unknown function (DUF951) LK685_00105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK685_00105 PF00384 Molybdopterin oxidoreductase LK685_00105 PF01568 Molydopterin dinucleotide binding domain LK685_00110 PF01926 50S ribosome-binding GTPase LK685_00110 PF06071 Protein of unknown function (DUF933) LK685_00115 PF01250 Ribosomal protein S6 LK685_00120 PF00436 Single-strand binding protein family LK685_00125 PF01084 Ribosomal protein S18 LK685_00130 PF03372 Endonuclease/Exonuclease/phosphatase family LK685_00135 PF00356 Bacterial regulatory proteins, lacI family LK685_00135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LK685_00140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_00145 PF14602 Hexapeptide repeat of succinyl-transferase LK685_00145 PF12464 Maltose acetyltransferase LK685_00150 PF00083 Sugar (and other) transporter LK685_00155 PF02517 CPBP intramembrane metalloprotease LK685_00160 PF03190 Protein of unknown function, DUF255 LK685_00170 PF07690 Major Facilitator Superfamily LK685_00180 PF01872 RibD C-terminal domain LK685_00185 PF04237 YjbR LK685_00190 PF00583 Acetyltransferase (GNAT) family LK685_00200 PF13673 Acetyltransferase (GNAT) domain LK685_00205 PF01047 MarR family LK685_00210 PF00753 Metallo-beta-lactamase superfamily LK685_00225 PF13673 Acetyltransferase (GNAT) domain LK685_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_00230 PF03466 LysR substrate binding domain LK685_00235 PF07690 Major Facilitator Superfamily LK685_00240 PF00805 Pentapeptide repeats (8 copies) LK685_00245 PF13474 SnoaL-like domain LK685_00255 PF06445 GyrI-like small molecule binding domain LK685_00255 PF13411 MerR HTH family regulatory protein LK685_00260 PF07690 Major Facilitator Superfamily LK685_00270 PF01368 DHH family LK685_00270 PF02833 DHHA2 domain LK685_00275 PF01638 HxlR-like helix-turn-helix LK685_00280 PF07875 Coat F domain LK685_00290 PF09991 Predicted membrane protein (DUF2232) LK685_00295 PF02272 DHHA1 domain LK685_00295 PF01368 DHH family LK685_00300 PF03948 Ribosomal protein L9, C-terminal domain LK685_00300 PF01281 Ribosomal protein L9, N-terminal domain LK685_00305 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LK685_00310 PF07690 Major Facilitator Superfamily LK685_00315 PF14174 YycC-like protein LK685_00325 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LK685_00330 PF00772 DnaB-like helicase N terminal domain LK685_00330 PF03796 DnaB-like helicase C terminal domain LK685_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_00340 PF00709 Adenylosuccinate synthetase LK685_00365 PF00072 Response regulator receiver domain LK685_00365 PF00486 Transcriptional regulatory protein, C terminal LK685_00370 PF00672 HAMP domain LK685_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_00370 PF00512 His Kinase A (phospho-acceptor) domain LK685_00370 PF13426 PAS domain LK685_00375 PF07435 YycH protein LK685_00380 PF09648 YycH protein LK685_00385 PF00753 Metallo-beta-lactamase superfamily LK685_00390 PF13180 PDZ domain LK685_00410 PF00072 Response regulator receiver domain LK685_00410 PF00486 Transcriptional regulatory protein, C terminal LK685_00415 PF00512 His Kinase A (phospho-acceptor) domain LK685_00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_00415 PF00989 PAS fold LK685_00415 PF16736 Single Cache-like LK685_00420 PF00158 Sigma-54 interaction domain LK685_00420 PF02954 Bacterial regulatory protein, Fis family LK685_00420 PF13426 PAS domain LK685_00425 PF00202 Aminotransferase class-III LK685_00430 PF00324 Amino acid permease LK685_00435 PF00491 Arginase family LK685_00445 PF18801 response regulator aspartate phosphatase H, N terminal LK685_00450 PF00583 Acetyltransferase (GNAT) family LK685_00465 PF10852 Protein of unknown function (DUF2651) LK685_00475 PF08240 Alcohol dehydrogenase GroES-like domain LK685_00475 PF00107 Zinc-binding dehydrogenase LK685_00485 PF14116 YyzF-like protein LK685_00490 PF02590 Predicted SPOUT methyltransferase LK685_00495 PF00149 Calcineurin-like phosphoesterase LK685_00505 PF13476 AAA domain LK685_00505 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) LK685_00510 PF06874 Firmicute fructose-1,6-bisphosphatase LK685_00515 PF00005 ABC transporter LK685_00530 PF07702 UTRA domain LK685_00530 PF00392 Bacterial regulatory proteins, gntR family LK685_00535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LK685_00535 PF00367 phosphotransferase system, EIIB LK685_00535 PF02378 Phosphotransferase system, EIIC LK685_00545 PF00232 Glycosyl hydrolase family 1 LK685_00550 PF13192 Thioredoxin domain LK685_00550 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_00555 PF00578 AhpC/TSA family LK685_00560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LK685_00560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK685_00565 PF02447 GntP family permease LK685_00570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK685_00570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK685_00575 PF07729 FCD domain LK685_00575 PF00392 Bacterial regulatory proteins, gntR family LK685_00580 PF02595 Glycerate kinase family LK685_00585 PF04230 Polysaccharide pyruvyl transferase LK685_00590 PF04172 LrgB-like family LK685_00595 PF03788 LrgA family LK685_00600 PF01047 MarR family LK685_00605 PF00106 short chain dehydrogenase LK685_00610 PF00440 Bacterial regulatory proteins, tetR family LK685_00615 PF07883 Cupin domain LK685_00620 PF04235 Protein of unknown function (DUF418) LK685_00625 PF06271 RDD family LK685_00630 PF17369 Family of unknown function (DUF5391) LK685_00635 PF01011 PQQ enzyme repeat LK685_00635 PF13570 PQQ-like domain LK685_00635 PF13360 PQQ-like domain LK685_00640 PF07690 Major Facilitator Superfamily LK685_00645 PF13537 Glutamine amidotransferase domain LK685_00645 PF00733 Asparagine synthase LK685_00655 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LK685_00660 PF08241 Methyltransferase domain LK685_00665 PF08007 Cupin superfamily protein LK685_00670 PF00583 Acetyltransferase (GNAT) family LK685_00675 PF00171 Aldehyde dehydrogenase family LK685_00680 PF00440 Bacterial regulatory proteins, tetR family LK685_00695 PF00183 Hsp90 protein LK685_00700 PF00083 Sugar (and other) transporter LK685_00705 PF10850 Protein of unknown function (DUF2653) LK685_00715 PF00248 Aldo/keto reductase family LK685_00720 PF00455 DeoR C terminal sensor domain LK685_00720 PF08220 DeoR-like helix-turn-helix domain LK685_00725 PF00171 Aldehyde dehydrogenase family LK685_00730 PF04962 KduI/IolB family LK685_00735 PF00294 pfkB family carbohydrate kinase LK685_00740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK685_00740 PF00205 Thiamine pyrophosphate enzyme, central domain LK685_00740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK685_00745 PF01261 Xylose isomerase-like TIM barrel LK685_00750 PF07690 Major Facilitator Superfamily LK685_00755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_00755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_00760 PF01261 Xylose isomerase-like TIM barrel LK685_00765 PF01261 Xylose isomerase-like TIM barrel LK685_00770 PF01116 Fructose-bisphosphate aldolase class-II LK685_00775 PF00072 Response regulator receiver domain LK685_00775 PF00486 Transcriptional regulatory protein, C terminal LK685_00780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_00785 PF00005 ABC transporter LK685_00790 PF02687 FtsX-like permease family LK685_00795 PF06486 Protein of unknown function (DUF1093) LK685_00800 PF01497 Periplasmic binding protein LK685_00820 PF11631 Protein of unknown function (DUF3255) LK685_00835 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LK685_00845 PF00296 Luciferase-like monooxygenase LK685_00850 PF00583 Acetyltransferase (GNAT) family LK685_00855 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK685_00860 PF00528 Binding-protein-dependent transport system inner membrane component LK685_00865 PF00005 ABC transporter LK685_00870 PF01546 Peptidase family M20/M25/M40 LK685_00870 PF07687 Peptidase dimerisation domain LK685_00875 PF03972 MmgE/PrpD family LK685_00880 PF04346 Ethanolamine utilisation protein, EutH LK685_00885 PF06724 Domain of Unknown Function (DUF1206) LK685_00890 PF04198 Putative sugar-binding domain LK685_00895 PF01791 DeoC/LacD family aldolase LK685_00900 PF01773 Na+ dependent nucleoside transporter N-terminus LK685_00900 PF07662 Na+ dependent nucleoside transporter C-terminus LK685_00905 PF02885 Glycosyl transferase family, helical bundle domain LK685_00905 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LK685_00905 PF00591 Glycosyl transferase family, a/b domain LK685_00910 PF00324 Amino acid permease LK685_00915 PF00491 Arginase family LK685_00920 PF01979 Amidohydrolase family LK685_00925 PF01175 Urocanase Rossmann-like domain LK685_00925 PF17392 Urocanase C-terminal domain LK685_00925 PF17391 Urocanase N-terminal domain LK685_00930 PF00221 Aromatic amino acid lyase LK685_00935 PF09021 HutP LK685_00945 PF04616 Glycosyl hydrolases family 43 LK685_00945 PF16369 C-terminal lipocalin-like domain LK685_00950 PF16888 Domain of unknown function (DUF5082) LK685_00960 PF14449 Pre-toxin TG LK685_00960 PF04740 LXG domain of WXG superfamily LK685_00970 PF18593 CdiI immunity protein LK685_00975 PF02378 Phosphotransferase system, EIIC LK685_00975 PF00367 phosphotransferase system, EIIB LK685_00975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LK685_00980 PF00232 Glycosyl hydrolase family 1 LK685_00985 PF00582 Universal stress protein family LK685_00990 PF00892 EamA-like transporter family LK685_00995 PF05593 RHS Repeat LK685_01030 PF10898 Protein of unknown function (DUF2716) LK685_01035 PF14176 YxiJ-like protein LK685_01050 PF13472 GDSL-like Lipase/Acylhydrolase family LK685_01055 PF03880 DbpA RNA binding domain LK685_01055 PF00270 DEAD/DEAH box helicase LK685_01055 PF00271 Helicase conserved C-terminal domain LK685_01060 PF11700 Vacuole effluxer Atg22 like LK685_01070 PF03123 CAT RNA binding domain LK685_01070 PF00874 PRD domain LK685_01075 PF00722 Glycosyl hydrolases family 16 LK685_01080 PF03600 Citrate transporter LK685_01085 PF06628 Catalase-related immune-responsive LK685_01085 PF18011 C-terminal domain found in long catalases LK685_01085 PF00199 Catalase LK685_01100 PF07662 Na+ dependent nucleoside transporter C-terminus LK685_01100 PF01773 Na+ dependent nucleoside transporter N-terminus LK685_01105 PF08241 Methyltransferase domain LK685_01115 PF01144 Coenzyme A transferase LK685_01120 PF01144 Coenzyme A transferase LK685_01130 PF01717 Cobalamin-independent synthase, Catalytic domain LK685_01135 PF01717 Cobalamin-independent synthase, Catalytic domain LK685_01140 PF04525 LURP-one-related LK685_01150 PF01546 Peptidase family M20/M25/M40 LK685_01150 PF07687 Peptidase dimerisation domain LK685_01155 PF00196 Bacterial regulatory proteins, luxR family LK685_01155 PF00072 Response regulator receiver domain LK685_01160 PF07730 Histidine kinase LK685_01170 PF16363 GDP-mannose 4,6 dehydratase LK685_01175 PF11611 Domain of unknown function (DUF4352) LK685_01180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LK685_01180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LK685_01185 PF00171 Aldehyde dehydrogenase family LK685_01190 PF13556 PucR C-terminal helix-turn-helix domain LK685_01195 PF17912 MalK OB fold domain LK685_01195 PF03459 TOBE domain LK685_01195 PF00005 ABC transporter LK685_01200 PF01522 Polysaccharide deacetylase LK685_01210 PF01435 Peptidase family M48 LK685_01215 PF03390 2-hydroxycarboxylate transporter family LK685_01220 PF01654 Cytochrome bd terminal oxidase subunit I LK685_01225 PF02322 Cytochrome bd terminal oxidase subunit II LK685_01230 PF00005 ABC transporter LK685_01230 PF00664 ABC transporter transmembrane region LK685_01235 PF00664 ABC transporter transmembrane region LK685_01235 PF00005 ABC transporter LK685_01240 PF01256 Carbohydrate kinase LK685_01245 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LK685_01250 PF08281 Sigma-70, region 4 LK685_01250 PF04542 Sigma-70 region 2 LK685_01255 PF17280 Family of unknown function (DUF5345) LK685_01265 PF13396 Phospholipase_D-nuclease N-terminal LK685_01270 PF00005 ABC transporter LK685_01270 PF13732 Domain of unknown function (DUF4162) LK685_01275 PF12679 ABC-2 family transporter protein LK685_01280 PF07690 Major Facilitator Superfamily LK685_01285 PF06628 Catalase-related immune-responsive LK685_01285 PF00199 Catalase LK685_01290 PF02245 Methylpurine-DNA glycosylase (MPG) LK685_01300 PF05043 Mga helix-turn-helix domain LK685_01300 PF00874 PRD domain LK685_01300 PF08279 HTH domain LK685_01300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK685_01305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LK685_01310 PF02378 Phosphotransferase system, EIIC LK685_01315 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LK685_01320 PF11975 Family 4 glycosyl hydrolase C-terminal domain LK685_01320 PF02056 Family 4 glycosyl hydrolase LK685_01325 PF01063 Amino-transferase class IV LK685_01330 PF00106 short chain dehydrogenase LK685_01335 PF04914 DltD protein LK685_01340 PF00550 Phosphopantetheine attachment site LK685_01345 PF03062 MBOAT, membrane-bound O-acyltransferase family LK685_01350 PF00501 AMP-binding enzyme LK685_01350 PF13193 AMP-binding enzyme C-terminal domain LK685_01355 PF12459 D-Ala-teichoic acid biosynthesis protein LK685_01365 PF01040 UbiA prenyltransferase family LK685_01370 PF04607 Region found in RelA / SpoT proteins LK685_01375 PF07690 Major Facilitator Superfamily LK685_01390 PF04389 Peptidase family M28 LK685_01390 PF02225 PA domain LK685_01395 PF00579 tRNA synthetases class I (W and Y) LK685_01395 PF01479 S4 domain LK685_01400 PF01047 MarR family LK685_01405 PF09529 Integral membrane protein (intg_mem_TP0381) LK685_01410 PF01501 Glycosyl transferase family 8 LK685_01415 PF00874 PRD domain LK685_01415 PF03123 CAT RNA binding domain LK685_01420 PF00367 phosphotransferase system, EIIB LK685_01420 PF02378 Phosphotransferase system, EIIC LK685_01425 PF00082 Subtilase family LK685_01430 PF02378 Phosphotransferase system, EIIC LK685_01435 PF10924 Protein of unknown function (DUF2711) LK685_01440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_01445 PF17785 PUA-like domain LK685_01445 PF10672 S-adenosylmethionine-dependent methyltransferase LK685_01450 PF09962 Uncharacterized conserved protein (DUF2196) LK685_01455 PF12832 MFS_1 like family LK685_01460 PF04172 LrgB-like family LK685_01465 PF03788 LrgA family LK685_01470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_01470 PF03466 LysR substrate binding domain LK685_01475 PF02110 Hydroxyethylthiazole kinase family LK685_01480 PF02581 Thiamine monophosphate synthase LK685_01485 PF03239 Iron permease FTR1 family LK685_01490 PF09375 Imelysin LK685_01495 PF04261 Dyp-type peroxidase family LK685_01495 PF10518 TAT (twin-arginine translocation) pathway signal sequence LK685_01500 PF01323 DSBA-like thioredoxin domain LK685_01505 PF00474 Sodium:solute symporter family LK685_01510 PF04341 Protein of unknown function, DUF485 LK685_01515 PF08671 Anti-repressor SinI LK685_01520 PF00440 Bacterial regulatory proteins, tetR family LK685_01525 PF04138 GtrA-like protein LK685_01530 PF10509 Galactokinase galactose-binding signature LK685_01530 PF00288 GHMP kinases N terminal domain LK685_01530 PF08544 GHMP kinases C terminal LK685_01535 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LK685_01535 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LK685_01540 PF04226 Transglycosylase associated protein LK685_01545 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LK685_01545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LK685_01550 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK685_01555 PF00510 Cytochrome c oxidase subunit III LK685_01560 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LK685_01565 PF17368 Spore morphogenesis and germination YwcE LK685_01575 PF01098 Cell cycle protein LK685_01580 PF00881 Nitroreductase family LK685_01585 PF00296 Luciferase-like monooxygenase LK685_01590 PF13860 FlgD Ig-like domain LK685_01590 PF05922 Peptidase inhibitor I9 LK685_01590 PF02225 PA domain LK685_01590 PF00082 Subtilase family LK685_01600 PF00874 PRD domain LK685_01600 PF03123 CAT RNA binding domain LK685_01605 PF01226 Formate/nitrite transporter LK685_01610 PF02378 Phosphotransferase system, EIIC LK685_01610 PF00367 phosphotransferase system, EIIB LK685_01615 PF00251 Glycosyl hydrolases family 32 N-terminal domain LK685_01615 PF08244 Glycosyl hydrolases family 32 C terminal LK685_01625 PF08543 Phosphomethylpyrimidine kinase LK685_01630 PF03551 Transcriptional regulator PadR-like family LK685_01645 PF00535 Glycosyl transferase family 2 LK685_01650 PF03167 Uracil DNA glycosylase superfamily LK685_01660 PF17261 Family of unknown function (DUF5327) LK685_01665 PF00860 Permease family LK685_01670 PF04241 Protein of unknown function (DUF423) LK685_01675 PF09671 Spore coat protein (Spore_GerQ) LK685_01680 PF00535 Glycosyl transferase family 2 LK685_01685 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LK685_01690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LK685_01695 PF00583 Acetyltransferase (GNAT) family LK685_01700 PF08666 SAF domain LK685_01700 PF03102 NeuB family LK685_01705 PF02348 Cytidylyltransferase LK685_01710 PF04101 Glycosyltransferase family 28 C-terminal domain LK685_01715 PF00483 Nucleotidyl transferase LK685_01720 PF16363 GDP-mannose 4,6 dehydratase LK685_01725 PF04321 RmlD substrate binding domain LK685_01730 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LK685_01735 PF17735 Biofilm surface layer A LK685_01740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LK685_01740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LK685_01745 PF00171 Aldehyde dehydrogenase family LK685_01750 PF01546 Peptidase family M20/M25/M40 LK685_01755 PF00324 Amino acid permease LK685_01760 PF07690 Major Facilitator Superfamily LK685_01770 PF07883 Cupin domain LK685_01785 PF07690 Major Facilitator Superfamily LK685_01800 PF06778 Chlorite dismutase LK685_01805 PF01515 Phosphate acetyl/butaryl transferase LK685_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_01810 PF03466 LysR substrate binding domain LK685_01815 PF03099 Biotin/lipoate A/B protein ligase family LK685_01820 PF00892 EamA-like transporter family LK685_01830 PF07293 Protein of unknown function (DUF1450) LK685_01835 PF01966 HD domain LK685_01845 PF02082 Transcriptional regulator LK685_01850 PF07690 Major Facilitator Superfamily LK685_01855 PF02824 TGS domain LK685_01855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK685_01855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK685_01855 PF03129 Anticodon binding domain LK685_01860 PF01047 MarR family LK685_01865 PF01361 Tautomerase enzyme LK685_01870 PF02163 Peptidase family M50 LK685_01875 PF08741 YwhD family LK685_01880 PF00912 Transglycosylase LK685_01880 PF00905 Penicillin binding protein transpeptidase domain LK685_01885 PF17284 Spermidine synthase tetramerisation domain LK685_01890 PF00491 Arginase family LK685_01900 PF11131 Rap-phr extracellular signalling LK685_01905 PF18801 response regulator aspartate phosphatase H, N terminal LK685_01925 PF00675 Insulinase (Peptidase family M16) LK685_01930 PF05193 Peptidase M16 inactive domain LK685_01940 PF00005 ABC transporter LK685_01950 PF13186 Iron-sulfur cluster-binding domain LK685_01950 PF04055 Radical SAM superfamily LK685_01950 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LK685_01960 PF11420 Bacteriocin subtilosin A LK685_01965 PF09148 Domain of unknown function (DUF1934) LK685_01970 PF05746 DALR anticodon binding domain LK685_01970 PF00750 tRNA synthetases class I (R) LK685_01970 PF03485 Arginyl tRNA synthetase N terminal domain LK685_01975 PF07690 Major Facilitator Superfamily LK685_01980 PF00027 Cyclic nucleotide-binding domain LK685_01980 PF00325 Bacterial regulatory proteins, crp family LK685_01985 PF14256 YwiC-like protein LK685_01995 PF00384 Molybdopterin oxidoreductase LK685_01995 PF01568 Molydopterin dinucleotide binding domain LK685_01995 PF14710 Respiratory nitrate reductase alpha N-terminal LK685_02000 PF14711 Respiratory nitrate reductase beta C-terminal LK685_02000 PF13247 4Fe-4S dicluster domain LK685_02005 PF02613 Nitrate reductase delta subunit LK685_02010 PF02665 Nitrate reductase gamma subunit LK685_02020 PF13396 Phospholipase_D-nuclease N-terminal LK685_02020 PF13091 PLD-like domain LK685_02025 PF00005 ABC transporter LK685_02025 PF00664 ABC transporter transmembrane region LK685_02030 PF01872 RibD C-terminal domain LK685_02040 PF03851 UV-endonuclease UvdE LK685_02045 PF13091 PLD-like domain LK685_02050 PF13183 4Fe-4S dicluster domain LK685_02050 PF02754 Cysteine-rich domain LK685_02055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK685_02055 PF02770 Acyl-CoA dehydrogenase, middle domain LK685_02055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK685_02060 PF05066 HB1, ASXL, restriction endonuclease HTH domain LK685_02065 PF00117 Glutamine amidotransferase class-I LK685_02065 PF06418 CTP synthase N-terminus LK685_02070 PF10740 Domain of unknown function (DUF2529) LK685_02075 PF00072 Response regulator receiver domain LK685_02080 PF01116 Fructose-bisphosphate aldolase class-II LK685_02085 PF00923 Transaldolase/Fructose-6-phosphate aldolase LK685_02090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LK685_02095 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LK685_02105 PF07498 Rho termination factor, N-terminal domain LK685_02105 PF07497 Rho termination factor, RNA-binding domain LK685_02105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK685_02110 PF01197 Ribosomal protein L31 LK685_02115 PF00265 Thymidine kinase LK685_02120 PF03949 Malic enzyme, NAD binding domain LK685_02120 PF00390 Malic enzyme, N-terminal domain LK685_02125 PF03547 Membrane transport protein LK685_02130 PF13411 MerR HTH family regulatory protein LK685_02135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_02140 PF00472 RF-1 domain LK685_02140 PF03462 PCRF domain LK685_02145 PF05175 Methyltransferase small domain LK685_02145 PF17827 PrmC N-terminal domain LK685_02150 PF17247 Family of unknown function (DUF5316) LK685_02155 PF17094 Uncharacterised protein family (UPF0715) LK685_02160 PF09551 Stage II sporulation protein R (spore_II_R) LK685_02170 PF03481 Putative GTP-binding controlling metal-binding LK685_02170 PF01300 Telomere recombination LK685_02175 PF02659 Putative manganese efflux pump LK685_02180 PF01451 Low molecular weight phosphotyrosine protein phosphatase LK685_02185 PF02502 Ribose/Galactose Isomerase LK685_02190 PF04260 Protein of unknown function (DUF436) LK685_02195 PF00464 Serine hydroxymethyltransferase LK685_02205 PF03899 ATP synthase I chain LK685_02210 PF00119 ATP synthase A chain LK685_02215 PF00137 ATP synthase subunit C LK685_02220 PF00430 ATP synthase B/B' CF(0) LK685_02225 PF00213 ATP synthase delta (OSCP) subunit LK685_02230 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK685_02230 PF00306 ATP synthase alpha/beta chain, C terminal domain LK685_02230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK685_02235 PF00231 ATP synthase LK685_02240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK685_02240 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK685_02245 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LK685_02245 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LK685_02255 PF06612 Protein of unknown function (DUF1146) LK685_02260 PF08680 TATA-box binding LK685_02265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LK685_02270 PF08486 Stage II sporulation protein LK685_02275 PF00092 von Willebrand factor type A domain LK685_02285 PF00092 von Willebrand factor type A domain LK685_02295 PF02634 FdhD/NarQ family LK685_02300 PF04055 Radical SAM superfamily LK685_02300 PF06463 Molybdenum Cofactor Synthesis C LK685_02305 PF17874 MalT-like TPR region LK685_02305 PF18801 response regulator aspartate phosphatase H, N terminal LK685_02315 PF05532 CsbD-like LK685_02330 PF00547 Urease, gamma subunit LK685_02335 PF00699 Urease beta subunit LK685_02340 PF01979 Amidohydrolase family LK685_02340 PF00449 Urease alpha-subunit, N-terminal domain LK685_02345 PF02082 Transcriptional regulator LK685_02350 PF13460 NAD(P)H-binding LK685_02355 PF17319 Family of unknown function (DUF5362) LK685_02360 PF07739 TipAS antibiotic-recognition domain LK685_02360 PF13411 MerR HTH family regulatory protein LK685_02365 PF13091 PLD-like domain LK685_02365 PF13396 Phospholipase_D-nuclease N-terminal LK685_02370 PF17370 Family of unknown function (DUF5392) LK685_02380 PF17319 Family of unknown function (DUF5362) LK685_02385 PF00583 Acetyltransferase (GNAT) family LK685_02390 PF01551 Peptidase family M23 LK685_02395 PF04892 VanZ like family LK685_02400 PF01569 PAP2 superfamily LK685_02405 PF00543 Nitrogen regulatory protein P-II LK685_02410 PF00909 Ammonium Transporter Family LK685_02420 PF00857 Isochorismatase family LK685_02425 PF07690 Major Facilitator Superfamily LK685_02430 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LK685_02435 PF13229 Right handed beta helix region LK685_02440 PF07690 Major Facilitator Superfamily LK685_02445 PF01047 MarR family LK685_02455 PF12116 Stage III sporulation protein D LK685_02465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK685_02465 PF00460 Flagella basal body rod protein LK685_02470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK685_02470 PF00460 Flagella basal body rod protein LK685_02475 PF18801 response regulator aspartate phosphatase H, N terminal LK685_02480 PF07977 FabA-like domain LK685_02485 PF01741 Large-conductance mechanosensitive channel, MscL LK685_02490 PF06580 Histidine kinase LK685_02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_02505 PF14183 YwpF-like protein LK685_02515 PF00436 Single-strand binding protein family LK685_02520 PF00455 DeoR C terminal sensor domain LK685_02520 PF08220 DeoR-like helix-turn-helix domain LK685_02530 PF00176 SNF2 family N-terminal domain LK685_02530 PF12419 SNF2 Helicase protein LK685_02530 PF00271 Helicase conserved C-terminal domain LK685_02535 PF04434 SWIM zinc finger LK685_02545 PF13807 G-rich domain on putative tyrosine kinase LK685_02545 PF02706 Chain length determinant protein LK685_02550 PF13614 AAA domain LK685_02560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LK685_02560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LK685_02560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LK685_02565 PF09234 Domain of unknown function (DUF1963) LK685_02575 PF16888 Domain of unknown function (DUF5082) LK685_02585 PF04740 LXG domain of WXG superfamily LK685_02585 PF14449 Pre-toxin TG LK685_02585 PF14431 YwqJ-like deaminase LK685_02595 PF04493 Endonuclease V LK685_02600 PF03466 LysR substrate binding domain LK685_02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_02605 PF03358 NADPH-dependent FMN reductase LK685_02615 PF02417 Chromate transporter LK685_02620 PF02417 Chromate transporter LK685_02625 PF01037 Lrp/AsnC ligand binding domain LK685_02625 PF13404 AsnC-type helix-turn-helix domain LK685_02635 PF13789 Domain of unknown function (DUF4181) LK685_02640 PF01613 Flavin reductase like domain LK685_02650 PF08757 CotH kinase protein LK685_02665 PF02040 Arsenical pump membrane protein LK685_02670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_02670 PF03466 LysR substrate binding domain LK685_02675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK685_02675 PF00205 Thiamine pyrophosphate enzyme, central domain LK685_02675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK685_02680 PF03306 Alpha-acetolactate decarboxylase LK685_02685 PF02525 Flavodoxin-like fold LK685_02690 PF13031 Protein of unknown function (DUF3892) LK685_02695 PF08239 Bacterial SH3 domain LK685_02700 PF13407 Periplasmic binding protein domain LK685_02705 PF02653 Branched-chain amino acid transport system / permease component LK685_02710 PF00005 ABC transporter LK685_02715 PF05025 RbsD / FucU transport protein family LK685_02720 PF00294 pfkB family carbohydrate kinase LK685_02725 PF00356 Bacterial regulatory proteins, lacI family LK685_02730 PF08245 Mur ligase middle domain LK685_02735 PF14102 Capsule biosynthesis CapC LK685_02740 PF09587 Bacterial capsule synthesis protein PGA_cap LK685_02750 PF00877 NlpC/P60 family LK685_02760 PF03816 Cell envelope-related transcriptional attenuator domain LK685_02765 PF00083 Sugar (and other) transporter LK685_02770 PF05504 Spore germination B3/ GerAC like, C-terminal LK685_02775 PF03845 Spore germination protein LK685_02780 PF03323 Bacillus/Clostridium GerA spore germination protein LK685_02785 PF01238 Phosphomannose isomerase type I LK685_02790 PF05036 Sporulation related domain LK685_02790 PF08239 Bacterial SH3 domain LK685_02790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LK685_02800 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LK685_02805 PF03808 Glycosyl transferase WecB/TagA/CpsF family LK685_02810 PF01467 Cytidylyltransferase-like LK685_02815 PF00534 Glycosyl transferases group 1 LK685_02815 PF09318 Glycosyl transferase 1 domain A LK685_02820 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LK685_02825 PF01061 ABC-2 type transporter LK685_02830 PF00005 ABC transporter LK685_02835 PF00483 Nucleotidyl transferase LK685_02840 PF02350 UDP-N-acetylglucosamine 2-epimerase LK685_02845 PF03816 Cell envelope-related transcriptional attenuator domain LK685_02855 PF08486 Stage II sporulation protein LK685_02855 PF04122 Putative cell wall binding repeat 2 LK685_02860 PF04122 Putative cell wall binding repeat 2 LK685_02860 PF01520 N-acetylmuramoyl-L-alanine amidase LK685_02865 PF02397 Bacterial sugar transferase LK685_02870 PF14667 Polysaccharide biosynthesis C-terminal domain LK685_02870 PF01943 Polysaccharide biosynthesis protein LK685_02875 PF13439 Glycosyltransferase Family 4 LK685_02875 PF00534 Glycosyl transferases group 1 LK685_02880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LK685_02880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LK685_02880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LK685_02885 PF04932 O-Antigen ligase LK685_02890 PF02706 Chain length determinant protein LK685_02895 PF00535 Glycosyl transferase family 2 LK685_02905 PF00953 Glycosyl transferase family 4 LK685_02910 PF03816 Cell envelope-related transcriptional attenuator domain LK685_02915 PF09186 Domain of unknown function (DUF1949) LK685_02915 PF01205 Uncharacterized protein family UPF0029 LK685_02920 PF05384 Sensor protein DegS LK685_02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_02920 PF07730 Histidine kinase LK685_02925 PF00196 Bacterial regulatory proteins, luxR family LK685_02925 PF00072 Response regulator receiver domain LK685_02930 PF02645 Uncharacterised protein, DegV family COG1307 LK685_02935 PF04851 Type III restriction enzyme, res subunit LK685_02935 PF00271 Helicase conserved C-terminal domain LK685_02940 PF10719 Late competence development protein ComFB LK685_02955 PF04316 Anti-sigma-28 factor, FlgM LK685_02960 PF05130 FlgN protein LK685_02965 PF00460 Flagella basal body rod protein LK685_02965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK685_02970 PF00700 Bacterial flagellin C-terminal helical region LK685_02970 PF00669 Bacterial flagellin N-terminal helical region LK685_02980 PF02623 FliW protein LK685_02985 PF02599 Global regulator protein family LK685_02990 PF00700 Bacterial flagellin C-terminal helical region LK685_02990 PF00669 Bacterial flagellin N-terminal helical region LK685_02995 PF03646 FlaG protein LK685_03000 PF02465 Flagellar hook-associated protein 2 N-terminus LK685_03000 PF07196 Flagellin hook IN motif LK685_03000 PF07195 Flagellar hook-associated protein 2 C-terminus LK685_03005 PF02561 Flagellar protein FliS LK685_03020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LK685_03020 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LK685_03025 PF07516 SecA Wing and Scaffold domain LK685_03025 PF01043 SecA preprotein cross-linking domain LK685_03025 PF02810 SEC-C motif LK685_03025 PF07517 SecA DEAD-like domain LK685_03035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LK685_03035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LK685_03040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK685_03045 PF00005 ABC transporter LK685_03050 PF18075 FtsX extracellular domain LK685_03050 PF02687 FtsX-like permease family LK685_03055 PF17820 PDZ domain LK685_03055 PF03572 Peptidase family S41 LK685_03055 PF01471 Putative peptidoglycan binding domain LK685_03060 PF17423 Swarming motility protein LK685_03065 PF17820 PDZ domain LK685_03070 PF07690 Major Facilitator Superfamily LK685_03075 PF00440 Bacterial regulatory proteins, tetR family LK685_03080 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LK685_03080 PF00391 PEP-utilising enzyme, mobile domain LK685_03085 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) LK685_03090 PF04851 Type III restriction enzyme, res subunit LK685_03090 PF02151 UvrB/uvrC motif LK685_03090 PF12344 Ultra-violet resistance protein B LK685_03090 PF17757 UvrB interaction domain LK685_03090 PF00271 Helicase conserved C-terminal domain LK685_03095 PF17760 UvrA interaction domain LK685_03095 PF17755 UvrA DNA-binding domain LK685_03095 PF00005 ABC transporter LK685_03115 PF13349 Putative adhesin LK685_03120 PF04024 PspC domain LK685_03125 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LK685_03130 PF07690 Major Facilitator Superfamily LK685_03135 PF01047 MarR family LK685_03140 PF16715 Cyclodipeptide synthase LK685_03145 PF00067 Cytochrome P450 LK685_03150 PF01047 MarR family LK685_03155 PF00149 Calcineurin-like phosphoesterase LK685_03160 PF07702 UTRA domain LK685_03160 PF00392 Bacterial regulatory proteins, gntR family LK685_03165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LK685_03170 PF01979 Amidohydrolase family LK685_03175 PF07475 HPr Serine kinase C-terminal domain LK685_03175 PF02603 HPr Serine kinase N terminus LK685_03180 PF01790 Prolipoprotein diacylglyceryl transferase LK685_03185 PF07670 Nucleoside recognition LK685_03190 PF13419 Haloacid dehalogenase-like hydrolase LK685_03195 PF14602 Hexapeptide repeat of succinyl-transferase LK685_03200 PF03211 Pectate lyase LK685_03205 PF13529 Peptidase_C39 like family LK685_03210 PF13393 Histidyl-tRNA synthetase LK685_03215 PF01634 ATP phosphoribosyltransferase LK685_03220 PF00815 Histidinol dehydrogenase LK685_03225 PF00475 Imidazoleglycerol-phosphate dehydratase LK685_03230 PF00117 Glutamine amidotransferase class-I LK685_03235 PF00977 Histidine biosynthesis protein LK685_03240 PF00977 Histidine biosynthesis protein LK685_03245 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LK685_03245 PF01502 Phosphoribosyl-AMP cyclohydrolase LK685_03265 PF00005 ABC transporter LK685_03265 PF00664 ABC transporter transmembrane region LK685_03275 PF00877 NlpC/P60 family LK685_03280 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_03285 PF00293 NUDIX domain LK685_03290 PF03668 P-loop ATPase protein family LK685_03295 PF01933 Uncharacterised protein family UPF0052 LK685_03300 PF02650 WhiA C-terminal HTH domain LK685_03300 PF14527 WhiA LAGLIDADG-like domain LK685_03300 PF10298 WhiA N-terminal LAGLIDADG-like domain LK685_03305 PF00381 PTS HPr component phosphorylation site LK685_03310 PF00797 N-acetyltransferase LK685_03320 PF00072 Response regulator receiver domain LK685_03320 PF00486 Transcriptional regulatory protein, C terminal LK685_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_03330 PF00005 ABC transporter LK685_03335 PF02687 FtsX-like permease family LK685_03340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK685_03340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK685_03345 PF00484 Carbonic anhydrase LK685_03350 PF00916 Sulfate permease family LK685_03350 PF01740 STAS domain LK685_03355 PF03819 MazG nucleotide pyrophosphohydrolase domain LK685_03360 PF03641 Possible lysine decarboxylase LK685_03365 PF00356 Bacterial regulatory proteins, lacI family LK685_03370 PF02903 Alpha amylase, N-terminal ig-like domain LK685_03370 PF00128 Alpha amylase, catalytic domain LK685_03375 PF13416 Bacterial extracellular solute-binding protein LK685_03380 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03385 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03390 PF06691 Protein of unknown function (DUF1189) LK685_03395 PF03633 Glycosyl hydrolase family 65, C-terminal domain LK685_03395 PF03632 Glycosyl hydrolase family 65 central catalytic domain LK685_03395 PF03636 Glycosyl hydrolase family 65, N-terminal domain LK685_03400 PF00128 Alpha amylase, catalytic domain LK685_03400 PF16657 Maltogenic Amylase, C-terminal domain LK685_03405 PF13419 Haloacid dehalogenase-like hydrolase LK685_03410 PF00574 Clp protease LK685_03420 PF01734 Patatin-like phospholipase LK685_03425 PF01565 FAD binding domain LK685_03425 PF08031 Berberine and berberine like LK685_03430 PF11553 Protein of unknown function (DUF3231) LK685_03435 PF00893 Small Multidrug Resistance protein LK685_03440 PF00893 Small Multidrug Resistance protein LK685_03445 PF17934 Tetracyclin repressor-like, C-terminal domain LK685_03445 PF00440 Bacterial regulatory proteins, tetR family LK685_03450 PF13520 Amino acid permease LK685_03455 PF08244 Glycosyl hydrolases family 32 C terminal LK685_03455 PF00251 Glycosyl hydrolases family 32 N-terminal domain LK685_03460 PF02435 Levansucrase/Invertase LK685_03465 PF00144 Beta-lactamase LK685_03465 PF11954 Domain of unknown function (DUF3471) LK685_03470 PF01177 Asp/Glu/Hydantoin racemase LK685_03485 PF05870 Phenolic acid decarboxylase (PAD) LK685_03495 PF00135 Carboxylesterase family LK685_03500 PF08671 Anti-repressor SinI LK685_03500 PF01381 Helix-turn-helix LK685_03505 PF02706 Chain length determinant protein LK685_03510 PF13614 AAA domain LK685_03515 PF02719 Polysaccharide biosynthesis protein LK685_03520 PF00534 Glycosyl transferases group 1 LK685_03520 PF13439 Glycosyltransferase Family 4 LK685_03525 PF00535 Glycosyl transferase family 2 LK685_03530 PF00534 Glycosyl transferases group 1 LK685_03530 PF13439 Glycosyltransferase Family 4 LK685_03540 PF00535 Glycosyl transferase family 2 LK685_03545 PF04230 Polysaccharide pyruvyl transferase LK685_03550 PF00535 Glycosyl transferase family 2 LK685_03555 PF01943 Polysaccharide biosynthesis protein LK685_03555 PF14667 Polysaccharide biosynthesis C-terminal domain LK685_03560 PF02397 Bacterial sugar transferase LK685_03565 PF00132 Bacterial transferase hexapeptide (six repeats) LK685_03565 PF17836 PglD N-terminal domain LK685_03570 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LK685_03575 PF04230 Polysaccharide pyruvyl transferase LK685_03580 PF09628 YvfG protein LK685_03585 PF00309 Sigma-54 factor, Activator interacting domain (AID) LK685_03585 PF04552 Sigma-54, DNA binding domain LK685_03585 PF04963 Sigma-54 factor, core binding domain LK685_03590 PF02652 L-lactate permease LK685_03595 PF00392 Bacterial regulatory proteins, gntR family LK685_03595 PF07729 FCD domain LK685_03600 PF00356 Bacterial regulatory proteins, lacI family LK685_03605 PF13416 Bacterial extracellular solute-binding protein LK685_03610 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03615 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03620 PF02449 Beta-galactosidase LK685_03620 PF08532 Beta-galactosidase trimerisation domain LK685_03620 PF08533 Beta-galactosidase C-terminal domain LK685_03625 PF07745 Glycosyl hydrolase family 53 LK685_03630 PF13426 PAS domain LK685_03630 PF07228 Stage II sporulation protein E (SpoIIE) LK685_03635 PF12697 Alpha/beta hydrolase family LK685_03640 PF00005 ABC transporter LK685_03650 PF07730 Histidine kinase LK685_03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_03655 PF00196 Bacterial regulatory proteins, luxR family LK685_03655 PF00072 Response regulator receiver domain LK685_03660 PF02754 Cysteine-rich domain LK685_03665 PF11870 Domain of unknown function (DUF3390) LK685_03665 PF13183 4Fe-4S dicluster domain LK685_03665 PF02589 LUD domain LK685_03670 PF02589 LUD domain LK685_03675 PF00704 Glycosyl hydrolases family 18 LK685_03680 PF00324 Amino acid permease LK685_03685 PF00892 EamA-like transporter family LK685_03690 PF03466 LysR substrate binding domain LK685_03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_03695 PF00296 Luciferase-like monooxygenase LK685_03700 PF00392 Bacterial regulatory proteins, gntR family LK685_03705 PF00083 Sugar (and other) transporter LK685_03710 PF04198 Putative sugar-binding domain LK685_03715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LK685_03715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LK685_03720 PF00162 Phosphoglycerate kinase LK685_03725 PF00121 Triosephosphate isomerase LK685_03730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LK685_03730 PF01676 Metalloenzyme superfamily LK685_03735 PF00113 Enolase, C-terminal TIM barrel domain LK685_03735 PF03952 Enolase, N-terminal domain LK685_03740 PF00583 Acetyltransferase (GNAT) family LK685_03745 PF13240 zinc-ribbon domain LK685_03755 PF08000 Bacterial PH domain LK685_03755 PF11724 YvbH-like oligomerisation region LK685_03760 PF01914 MarC family integral membrane protein LK685_03765 PF12802 MarR family LK685_03770 PF00571 CBS domain LK685_03770 PF00005 ABC transporter LK685_03775 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LK685_03785 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03790 PF01022 Bacterial regulatory protein, arsR family LK685_03795 PF13630 SdpI/YhfL protein family LK685_03795 PF07853 Protein of unknown function (DUF1648) LK685_03805 PF05090 Vitamin K-dependent gamma-carboxylase LK685_03810 PF17418 Sporulation delaying protein SdpA LK685_03815 PF12802 MarR family LK685_03820 PF00005 ABC transporter LK685_03820 PF00571 CBS domain LK685_03825 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LK685_03835 PF00528 Binding-protein-dependent transport system inner membrane component LK685_03840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_03840 PF00672 HAMP domain LK685_03840 PF12729 Four helix bundle sensory module for signal transduction LK685_03845 PF01638 HxlR-like helix-turn-helix LK685_03860 PF01381 Helix-turn-helix LK685_03865 PF00561 alpha/beta hydrolase fold LK685_03870 PF03840 Preprotein translocase SecG subunit LK685_03875 PF12146 Serine aminopeptidase, S33 LK685_03880 PF00575 S1 RNA binding domain LK685_03880 PF00773 RNB domain LK685_03880 PF08206 Ribonuclease B OB domain LK685_03880 PF17876 Cold shock domain LK685_03885 PF01668 SmpB protein LK685_03895 PF00106 short chain dehydrogenase LK685_03900 PF00440 Bacterial regulatory proteins, tetR family LK685_03905 PF00893 Small Multidrug Resistance protein LK685_03910 PF17314 Family of unknown function (DUF5360) LK685_03920 PF02525 Flavodoxin-like fold LK685_03925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_03925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_03930 PF02583 Metal-sensitive transcriptional repressor LK685_03935 PF00403 Heavy-metal-associated domain LK685_03940 PF00403 Heavy-metal-associated domain LK685_03945 PF00403 Heavy-metal-associated domain LK685_03950 PF13462 Thioredoxin LK685_03955 PF02600 Disulfide bond formation protein DsbB LK685_03960 PF03458 UPF0126 domain LK685_03965 PF13538 UvrD-like helicase C-terminal domain LK685_03970 PF00175 Oxidoreductase NAD-binding domain LK685_03970 PF00258 Flavodoxin LK685_03970 PF00667 FAD binding domain LK685_03975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LK685_03975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LK685_03980 PF00999 Sodium/hydrogen exchanger family LK685_03990 PF00248 Aldo/keto reductase family LK685_03995 PF00528 Binding-protein-dependent transport system inner membrane component LK685_04005 PF12728 Helix-turn-helix domain LK685_04005 PF12727 PBP superfamily domain LK685_04010 PF00884 Sulfatase LK685_04015 PF04307 LexA-binding, inner membrane-associated putative hydrolase LK685_04020 PF09575 Small spore protein J (Spore_SspJ) LK685_04025 PF13520 Amino acid permease LK685_04030 PF01497 Periplasmic binding protein LK685_04035 PF01032 FecCD transport family LK685_04040 PF01032 FecCD transport family LK685_04045 PF00005 ABC transporter LK685_04050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK685_04055 PF00005 ABC transporter LK685_04060 PF02687 FtsX-like permease family LK685_04060 PF12704 MacB-like periplasmic core domain LK685_04065 PF14184 Regulatory protein YrvL LK685_04070 PF00190 Cupin LK685_04075 PF12841 YvrJ protein family LK685_04080 PF04545 Sigma-70, region 4 LK685_04090 PF00486 Transcriptional regulatory protein, C terminal LK685_04090 PF00072 Response regulator receiver domain LK685_04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_04095 PF00512 His Kinase A (phospho-acceptor) domain LK685_04100 PF08450 SMP-30/Gluconolactonase/LRE-like region LK685_04105 PF00106 short chain dehydrogenase LK685_04110 PF01497 Periplasmic binding protein LK685_04115 PF01032 FecCD transport family LK685_04120 PF00005 ABC transporter LK685_04125 PF01923 Cobalamin adenosyltransferase LK685_04130 PF07690 Major Facilitator Superfamily LK685_04140 PF04012 PspA/IM30 family LK685_04145 PF13349 Putative adhesin LK685_04150 PF09922 Cell wall-active antibiotics response 4TMS YvqF LK685_04155 PF07730 Histidine kinase LK685_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_04155 PF00672 HAMP domain LK685_04160 PF00072 Response regulator receiver domain LK685_04160 PF00196 Bacterial regulatory proteins, luxR family LK685_04165 PF05504 Spore germination B3/ GerAC like, C-terminal LK685_04170 PF03845 Spore germination protein LK685_04175 PF03323 Bacillus/Clostridium GerA spore germination protein LK685_04180 PF13113 Protein of unknown function (DUF3970) LK685_04185 PF10415 Fumarase C C-terminus LK685_04185 PF00206 Lyase LK685_04190 PF00440 Bacterial regulatory proteins, tetR family LK685_04200 PF00672 HAMP domain LK685_04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_04200 PF00512 His Kinase A (phospho-acceptor) domain LK685_04205 PF00072 Response regulator receiver domain LK685_04205 PF00486 Transcriptional regulatory protein, C terminal LK685_04210 PF13180 PDZ domain LK685_04215 PF00210 Ferritin-like domain LK685_04225 PF00155 Aminotransferase class I and II LK685_04260 PF00005 ABC transporter LK685_04275 PF14039 YusW-like protein LK685_04280 PF00005 ABC transporter LK685_04285 PF10835 Protein of unknown function (DUF2573) LK685_04290 PF03466 LysR substrate binding domain LK685_04290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_04300 PF14552 Tautomerase enzyme LK685_04305 PF07690 Major Facilitator Superfamily LK685_04310 PF01047 MarR family LK685_04315 PF07875 Coat F domain LK685_04330 PF14115 YuzL-like protein LK685_04335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK685_04335 PF00378 Enoyl-CoA hydratase/isomerase LK685_04335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK685_04340 PF02803 Thiolase, C-terminal domain LK685_04340 PF00108 Thiolase, N-terminal domain LK685_04345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK685_04345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK685_04345 PF02770 Acyl-CoA dehydrogenase, middle domain LK685_04350 PF03960 ArsC family LK685_04355 PF01597 Glycine cleavage H-protein LK685_04360 PF10830 Protein of unknown function (DUF2553) LK685_04365 PF01751 Toprim domain LK685_04370 PF00085 Thioredoxin LK685_04375 PF02036 SCP-2 sterol transfer family LK685_04380 PF00005 ABC transporter LK685_04380 PF09383 NIL domain LK685_04385 PF00528 Binding-protein-dependent transport system inner membrane component LK685_04390 PF03180 NLPA lipoprotein LK685_04395 PF02627 Carboxymuconolactone decarboxylase family LK685_04405 PF00005 ABC transporter LK685_04410 PF01458 Uncharacterized protein family (UPF0051) LK685_04415 PF00266 Aminotransferase class-V LK685_04420 PF01592 NifU-like N terminal domain LK685_04425 PF01458 Uncharacterized protein family (UPF0051) LK685_04440 PF01266 FAD dependent oxidoreductase LK685_04445 PF01541 GIY-YIG catalytic domain LK685_04450 PF01380 SIS domain LK685_04455 PF01547 Bacterial extracellular solute-binding protein LK685_04460 PF00528 Binding-protein-dependent transport system inner membrane component LK685_04465 PF00528 Binding-protein-dependent transport system inner membrane component LK685_04470 PF00294 pfkB family carbohydrate kinase LK685_04475 PF07702 UTRA domain LK685_04475 PF00392 Bacterial regulatory proteins, gntR family LK685_04480 PF03459 TOBE domain LK685_04480 PF17912 MalK OB fold domain LK685_04480 PF00005 ABC transporter LK685_04485 PF04231 Endonuclease I LK685_04495 PF01546 Peptidase family M20/M25/M40 LK685_04500 PF00266 Aminotransferase class-V LK685_04505 PF13478 XdhC Rossmann domain LK685_04505 PF02625 XdhC and CoxI family LK685_04510 PF12804 MobA-like NTP transferase domain LK685_04515 PF00941 FAD binding domain in molybdopterin dehydrogenase LK685_04520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK685_04520 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LK685_04525 PF01799 [2Fe-2S] binding domain LK685_04525 PF00111 2Fe-2S iron-sulfur cluster binding domain LK685_04530 PF09680 Family of unknown function LK685_04535 PF00576 HIUase/Transthyretin family LK685_04540 PF01014 Uricase LK685_04540 PF09349 OHCU decarboxylase LK685_04545 PF00860 Permease family LK685_04550 PF00860 Permease family LK685_04555 PF17853 GGDEF-like domain LK685_04555 PF13556 PucR C-terminal helix-turn-helix domain LK685_04555 PF07905 Purine catabolism regulatory protein-like family LK685_04560 PF01979 Amidohydrolase family LK685_04570 PF01904 Protein of unknown function DUF72 LK685_04575 PF01925 Sulfite exporter TauE/SafE LK685_04580 PF02872 5'-nucleotidase, C-terminal domain LK685_04585 PF08827 Domain of unknown function (DUF1805) LK685_04590 PF09560 Sporulation protein YunB (Spo_YunB) LK685_04595 PF01551 Peptidase family M23 LK685_04600 PF04055 Radical SAM superfamily LK685_04600 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LK685_04605 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LK685_04610 PF06265 Protein of unknown function (DUF1027) LK685_04615 PF01934 Protein of unknown function DUF86 LK685_04620 PF13344 Haloacid dehalogenase-like hydrolase LK685_04625 PF04608 Phosphatidylglycerophosphatase A LK685_04635 PF01842 ACT domain LK685_04635 PF00742 Homoserine dehydrogenase LK685_04635 PF03447 Homoserine dehydrogenase, NAD binding domain LK685_04640 PF00291 Pyridoxal-phosphate dependent enzyme LK685_04645 PF08544 GHMP kinases C terminal LK685_04645 PF00288 GHMP kinases N terminal domain LK685_04650 PF07676 WD40-like Beta Propeller Repeat LK685_04650 PF00326 Prolyl oligopeptidase family LK685_04655 PF01106 NifU-like domain LK685_04660 PF07315 Protein of unknown function (DUF1462) LK685_04665 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_04670 PF07293 Protein of unknown function (DUF1450) LK685_04675 PF01773 Na+ dependent nucleoside transporter N-terminus LK685_04675 PF07662 Na+ dependent nucleoside transporter C-terminus LK685_04680 PF01678 Diaminopimelate epimerase LK685_04685 PF01521 Iron-sulphur cluster biosynthesis LK685_04690 PF00583 Acetyltransferase (GNAT) family LK685_04695 PF04299 Putative FMN-binding domain LK685_04700 PF00478 IMP dehydrogenase / GMP reductase domain LK685_04710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_04715 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_04720 PF17302 Family of unknown function (DUF5351) LK685_04725 PF14068 Putative membrane protein LK685_04730 PF06725 3D domain LK685_04735 PF02681 Divergent PAP2 family LK685_04740 PF02789 Cytosol aminopeptidase family, N-terminal domain LK685_04740 PF00883 Cytosol aminopeptidase family, catalytic domain LK685_04745 PF13726 Na+-H+ antiporter family LK685_04745 PF03553 Na+/H+ antiporter family LK685_04750 PF02632 BioY family LK685_04755 PF00174 Oxidoreductase molybdopterin binding domain LK685_04760 PF00756 Putative esterase LK685_04765 PF00106 short chain dehydrogenase LK685_04770 PF00425 chorismate binding enzyme LK685_04775 PF13193 AMP-binding enzyme C-terminal domain LK685_04775 PF00501 AMP-binding enzyme LK685_04780 PF00550 Phosphopantetheine attachment site LK685_04780 PF00857 Isochorismatase family LK685_04785 PF00550 Phosphopantetheine attachment site LK685_04785 PF00975 Thioesterase domain LK685_04785 PF00668 Condensation domain LK685_04785 PF13193 AMP-binding enzyme C-terminal domain LK685_04785 PF00501 AMP-binding enzyme LK685_04790 PF03621 MbtH-like protein LK685_04795 PF10042 Uncharacterized conserved protein (DUF2278) LK685_04800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LK685_04800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LK685_04805 PF06018 CodY GAF-like domain LK685_04805 PF13556 PucR C-terminal helix-turn-helix domain LK685_04805 PF17853 GGDEF-like domain LK685_04810 PF06013 Proteins of 100 residues with WXG LK685_04815 PF08817 WXG100 protein secretion system (Wss), protein YukD LK685_04820 PF10140 WXG100 protein secretion system (Wss), protein YukC LK685_04825 PF01580 FtsK/SpoIIIE family LK685_04825 PF12538 DNA transporter LK685_04835 PF17355 Family of unknown function (DUF5383) LK685_04840 PF00106 short chain dehydrogenase LK685_04845 PF01966 HD domain LK685_04850 PF10842 Protein of unknown function (DUF2642) LK685_04855 PF10049 Protein of unknown function (DUF2283) LK685_04860 PF01594 AI-2E family transporter LK685_04865 PF10676 Spore germination protein gerPA/gerPF LK685_04870 PF14166 YueH-like protein LK685_04875 PF07997 Protein of unknown function (DUF1694) LK685_04880 PF00857 Isochorismatase family LK685_04885 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LK685_04885 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LK685_04885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LK685_04890 PF08668 HDOD domain LK685_04890 PF00563 EAL domain LK685_04905 PF08181 DegQ (SacQ) family LK685_04910 PF00348 Polyprenyl synthetase LK685_04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_04920 PF07730 Histidine kinase LK685_04925 PF00072 Response regulator receiver domain LK685_04925 PF00196 Bacterial regulatory proteins, luxR family LK685_04930 PF03061 Thioesterase superfamily LK685_04935 PF03334 Na+/H+ antiporter subunit LK685_04940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LK685_04945 PF01899 Na+/H+ ion antiporter subunit LK685_04950 PF00361 Proton-conducting membrane transporter LK685_04955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LK685_04960 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LK685_04965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LK685_04965 PF00361 Proton-conducting membrane transporter LK685_04965 PF13244 Domain of unknown function (DUF4040) LK685_04975 PF03390 2-hydroxycarboxylate transporter family LK685_04980 PF02653 Branched-chain amino acid transport system / permease component LK685_04985 PF02653 Branched-chain amino acid transport system / permease component LK685_04990 PF00005 ABC transporter LK685_04995 PF02608 ABC transporter substrate-binding protein PnrA-like LK685_05000 PF00072 Response regulator receiver domain LK685_05005 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LK685_05005 PF17203 Single cache domain 3 LK685_05005 PF00989 PAS fold LK685_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_05010 PF17328 Family of unknown function (DUF5366) LK685_05015 PF04134 Protein of unknown function, DUF393 LK685_05020 PF00912 Transglycosylase LK685_05020 PF00905 Penicillin binding protein transpeptidase domain LK685_05025 PF07690 Major Facilitator Superfamily LK685_05035 PF00929 Exonuclease LK685_05040 PF08810 Kinase associated protein B LK685_05045 PF00512 His Kinase A (phospho-acceptor) domain LK685_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_05050 PF00155 Aminotransferase class I and II LK685_05055 PF08958 Domain of unknown function (DUF1871) LK685_05060 PF08386 TAP-like protein LK685_05060 PF00561 alpha/beta hydrolase fold LK685_05065 PF01037 Lrp/AsnC ligand binding domain LK685_05070 PF00155 Aminotransferase class I and II LK685_05075 PF00575 S1 RNA binding domain LK685_05080 PF04070 Domain of unknown function (DUF378) LK685_05085 PF00465 Iron-containing alcohol dehydrogenase LK685_05090 PF00465 Iron-containing alcohol dehydrogenase LK685_05095 PF00342 Phosphoglucose isomerase LK685_05105 PF08868 YugN-like family LK685_05110 PF07885 Ion channel LK685_05110 PF02254 TrkA-N domain LK685_05115 PF11458 Membrane-integrating protein Mistic LK685_05125 PF04298 Putative neutral zinc metallopeptidase LK685_05130 PF01595 Cyclin M transmembrane N-terminal domain LK685_05130 PF03471 Transporter associated domain LK685_05130 PF00571 CBS domain LK685_05135 PF00128 Alpha amylase, catalytic domain LK685_05135 PF16657 Maltogenic Amylase, C-terminal domain LK685_05145 PF01894 Uncharacterised protein family UPF0047 LK685_05160 PF02743 Cache domain LK685_05160 PF00672 HAMP domain LK685_05160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_05165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_05165 PF00672 HAMP domain LK685_05165 PF02743 Cache domain LK685_05170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_05170 PF00672 HAMP domain LK685_05170 PF02743 Cache domain LK685_05175 PF02743 Cache domain LK685_05175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_05175 PF00672 HAMP domain LK685_05180 PF00596 Class II Aldolase and Adducin N-terminal domain LK685_05185 PF00455 DeoR C terminal sensor domain LK685_05185 PF08220 DeoR-like helix-turn-helix domain LK685_05190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK685_05190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK685_05195 PF05336 L-rhamnose mutarotase LK685_05200 PF06134 L-rhamnose isomerase (RhaA) LK685_05205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_05205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_05210 PF01594 AI-2E family transporter LK685_05215 PF02673 Bacitracin resistance protein BacA LK685_05225 PF05995 Cysteine dioxygenase type I LK685_05230 PF07690 Major Facilitator Superfamily LK685_05235 PF13457 GW (Gly-Tryp) dipeptide domain LK685_05235 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LK685_05240 PF05360 yiaA/B two helix domain LK685_05245 PF02386 Cation transport protein LK685_05250 PF02254 TrkA-N domain LK685_05250 PF02080 TrkA-C domain LK685_05255 PF17735 Biofilm surface layer A LK685_05265 PF00171 Aldehyde dehydrogenase family LK685_05270 PF00465 Iron-containing alcohol dehydrogenase LK685_05280 PF12867 DinB superfamily LK685_05290 PF15975 Flotillin LK685_05290 PF01145 SPFH domain / Band 7 family LK685_05295 PF00583 Acetyltransferase (GNAT) family LK685_05300 PF09515 Thiamine transporter protein (Thia_YuaJ) LK685_05425 PF02806 Alpha amylase, C-terminal all-beta domain LK685_05425 PF00128 Alpha amylase, catalytic domain LK685_05425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK685_05430 PF00483 Nucleotidyl transferase LK685_05435 PF00483 Nucleotidyl transferase LK685_05440 PF00534 Glycosyl transferases group 1 LK685_05440 PF08323 Starch synthase catalytic domain LK685_05445 PF00343 Carbohydrate phosphorylase LK685_05450 PF03073 TspO/MBR family LK685_05455 PF01636 Phosphotransferase enzyme family LK685_05460 PF13439 Glycosyltransferase Family 4 LK685_05460 PF00534 Glycosyl transferases group 1 LK685_05475 PF13439 Glycosyltransferase Family 4 LK685_05475 PF00534 Glycosyl transferases group 1 LK685_05480 PF01370 NAD dependent epimerase/dehydratase family LK685_05485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LK685_05485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LK685_05485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LK685_05490 PF00483 Nucleotidyl transferase LK685_05495 PF01258 Prokaryotic dksA/traR C4-type zinc finger LK685_05500 PF00425 chorismate binding enzyme LK685_05505 PF16582 Middle domain of thiamine pyrophosphate LK685_05505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK685_05505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK685_05510 PF00561 alpha/beta hydrolase fold LK685_05515 PF00378 Enoyl-CoA hydratase/isomerase LK685_05520 PF00501 AMP-binding enzyme LK685_05520 PF13193 AMP-binding enzyme C-terminal domain LK685_05525 PF13378 Enolase C-terminal domain-like LK685_05525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LK685_05530 PF01297 Zinc-uptake complex component A periplasmic LK685_05535 PF00005 ABC transporter LK685_05540 PF00950 ABC 3 transport family LK685_05545 PF00950 ABC 3 transport family LK685_05550 PF07561 Domain of Unknown Function (DUF1540) LK685_05555 PF02322 Cytochrome bd terminal oxidase subunit II LK685_05560 PF01654 Cytochrome bd terminal oxidase subunit I LK685_05565 PF01197 Ribosomal protein L31 LK685_05570 PF00484 Carbonic anhydrase LK685_05575 PF01809 Putative membrane protein insertion efficiency factor LK685_05580 PF02664 S-Ribosylhomocysteinase (LuxS) LK685_05585 PF13115 YtkA-like LK685_05595 PF00210 Ferritin-like domain LK685_05600 PF05105 Bacteriophage holin family LK685_05605 PF00293 NUDIX domain LK685_05610 PF00528 Binding-protein-dependent transport system inner membrane component LK685_05615 PF00005 ABC transporter LK685_05625 PF00326 Prolyl oligopeptidase family LK685_05630 PF10763 Protein of unknown function (DUF2584) LK685_05635 PF01293 Phosphoenolpyruvate carboxykinase LK685_05640 PF02773 S-adenosylmethionine synthetase, C-terminal domain LK685_05640 PF02772 S-adenosylmethionine synthetase, central domain LK685_05640 PF00438 S-adenosylmethionine synthetase, N-terminal domain LK685_05645 PF00733 Asparagine synthase LK685_05645 PF13537 Glutamine amidotransferase domain LK685_05650 PF00324 Amino acid permease LK685_05655 PF00132 Bacterial transferase hexapeptide (six repeats) LK685_05660 PF12146 Serine aminopeptidase, S33 LK685_05665 PF10776 Protein of unknown function (DUF2600) LK685_05670 PF06962 Putative rRNA methylase LK685_05675 PF16199 Radical_SAM C-terminal domain LK685_05675 PF04055 Radical SAM superfamily LK685_05680 PF10732 Protein of unknown function (DUF2524) LK685_05690 PF00392 Bacterial regulatory proteins, gntR family LK685_05695 PF00005 ABC transporter LK685_05710 PF00005 ABC transporter LK685_05715 PF12704 MacB-like periplasmic core domain LK685_05715 PF02687 FtsX-like permease family LK685_05720 PF00072 Response regulator receiver domain LK685_05720 PF00486 Transcriptional regulatory protein, C terminal LK685_05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_05730 PF00005 ABC transporter LK685_05735 PF02687 FtsX-like permease family LK685_05740 PF04791 LMBR1-like membrane protein LK685_05745 PF07690 Major Facilitator Superfamily LK685_05750 PF13426 PAS domain LK685_05750 PF01740 STAS domain LK685_05755 PF14074 Protein of unknown function (DUF4257) LK685_05760 PF00133 tRNA synthetases class I (I, L, M and V) LK685_05760 PF13603 Leucyl-tRNA synthetase, Domain 2 LK685_05760 PF09334 tRNA synthetases class I (M) LK685_05760 PF08264 Anticodon-binding domain of tRNA LK685_05765 PF00581 Rhodanese-like domain LK685_05770 PF11975 Family 4 glycosyl hydrolase C-terminal domain LK685_05770 PF02056 Family 4 glycosyl hydrolase LK685_05775 PF00528 Binding-protein-dependent transport system inner membrane component LK685_05780 PF00528 Binding-protein-dependent transport system inner membrane component LK685_05785 PF01547 Bacterial extracellular solute-binding protein LK685_05790 PF00356 Bacterial regulatory proteins, lacI family LK685_05795 PF01738 Dienelactone hydrolase family LK685_05800 PF03744 6-carboxyhexanoate--CoA ligase LK685_05805 PF00202 Aminotransferase class-III LK685_05810 PF00155 Aminotransferase class I and II LK685_05820 PF04055 Radical SAM superfamily LK685_05820 PF06968 Biotin and Thiamin Synthesis associated domain LK685_05825 PF00067 Cytochrome P450 LK685_05830 PF01370 NAD dependent epimerase/dehydratase family LK685_05835 PF00528 Binding-protein-dependent transport system inner membrane component LK685_05840 PF13416 Bacterial extracellular solute-binding protein LK685_05845 PF17853 GGDEF-like domain LK685_05845 PF12833 Helix-turn-helix domain LK685_05850 PF00528 Binding-protein-dependent transport system inner membrane component LK685_05855 PF07470 Glycosyl Hydrolase Family 88 LK685_05865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_05865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_05870 PF04854 Protein of unknown function, DUF624 LK685_05875 PF10957 Sporulation protein Cse60 LK685_05880 PF02028 BCCT, betaine/carnitine/choline family transporter LK685_05890 PF14667 Polysaccharide biosynthesis C-terminal domain LK685_05890 PF01943 Polysaccharide biosynthesis protein LK685_05895 PF00849 RNA pseudouridylate synthase LK685_05895 PF01479 S4 domain LK685_05900 PF08220 DeoR-like helix-turn-helix domain LK685_05905 PF00005 ABC transporter LK685_05910 PF05975 Bacterial ABC transporter protein EcsB LK685_05915 PF00860 Permease family LK685_05920 PF01546 Peptidase family M20/M25/M40 LK685_05925 PF00291 Pyridoxal-phosphate dependent enzyme LK685_05940 PF00781 Diacylglycerol kinase catalytic domain LK685_05945 PF17999 Pullulanase N1-terminal domain LK685_05945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK685_05945 PF00128 Alpha amylase, catalytic domain LK685_05950 PF01636 Phosphotransferase enzyme family LK685_05955 PF14165 YtzH-like protein LK685_05960 PF02390 Putative methyltransferase LK685_05965 PF00753 Metallo-beta-lactamase superfamily LK685_05970 PF00390 Malic enzyme, N-terminal domain LK685_05970 PF03949 Malic enzyme, NAD binding domain LK685_05975 PF03413 Peptidase propeptide and YPEB domain LK685_05980 PF05343 M42 glutamyl aminopeptidase LK685_05985 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ LK685_05995 PF00085 Thioredoxin LK685_06000 PF07285 Protein of unknown function (DUF1444) LK685_06005 PF14794 Domain of unknown function (DUF4479) LK685_06005 PF01588 Putative tRNA binding domain LK685_06010 PF09397 Ftsk gamma domain LK685_06010 PF01580 FtsK/SpoIIIE family LK685_06010 PF17854 FtsK alpha domain LK685_06015 PF08245 Mur ligase middle domain LK685_06015 PF02875 Mur ligase family, glutamate ligase domain LK685_06015 PF01225 Mur ligase family, catalytic domain LK685_06020 PF06103 Bacterial protein of unknown function (DUF948) LK685_06025 PF12732 YtxH-like protein LK685_06030 PF11009 Protein of unknown function (DUF2847) LK685_06035 PF00793 DAHP synthetase I family LK685_06035 PF01817 Chorismate mutase type II LK685_06040 PF00356 Bacterial regulatory proteins, lacI family LK685_06045 PF01618 MotA/TolQ/ExbB proton channel family LK685_06050 PF00691 OmpA family LK685_06050 PF13677 Membrane MotB of proton-channel complex MotA/MotB LK685_06055 PF00850 Histone deacetylase domain LK685_06060 PF00571 CBS domain LK685_06065 PF00583 Acetyltransferase (GNAT) family LK685_06070 PF00501 AMP-binding enzyme LK685_06070 PF13193 AMP-binding enzyme C-terminal domain LK685_06075 PF01479 S4 domain LK685_06075 PF00579 tRNA synthetases class I (W and Y) LK685_06080 PF00163 Ribosomal protein S4/S9 N-terminal domain LK685_06080 PF01479 S4 domain LK685_06085 PF00990 Diguanylate cyclase, GGDEF domain LK685_06090 PF13185 GAF domain LK685_06095 PF00440 Bacterial regulatory proteins, tetR family LK685_06100 PF02811 PHP domain LK685_06105 PF06160 Septation ring formation regulator, EzrA LK685_06110 PF05525 Branched-chain amino acid transport protein LK685_06115 PF00266 Aminotransferase class-V LK685_06120 PF02568 Thiamine biosynthesis protein (ThiI) LK685_06120 PF02926 THUMP domain LK685_06125 PF00269 Small, acid-soluble spore proteins, alpha/beta type LK685_06130 PF13193 AMP-binding enzyme C-terminal domain LK685_06130 PF00501 AMP-binding enzyme LK685_06135 PF07969 Amidohydrolase family LK685_06140 PF01513 ATP-NAD kinase LK685_06145 PF01343 Peptidase family S49 LK685_06150 PF06271 RDD family LK685_06155 PF11167 Protein of unknown function (DUF2953) LK685_06160 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LK685_06165 PF08534 Redoxin LK685_06170 PF02384 N-6 DNA Methylase LK685_06180 PF00871 Acetokinase family LK685_06185 PF00994 Probable molybdopterin binding domain LK685_06190 PF00764 Arginosuccinate synthase LK685_06195 PF00206 Lyase LK685_06195 PF14698 Argininosuccinate lyase C-terminal LK685_06210 PF03466 LysR substrate binding domain LK685_06210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_06215 PF00583 Acetyltransferase (GNAT) family LK685_06220 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK685_06225 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK685_06230 PF00528 Binding-protein-dependent transport system inner membrane component LK685_06235 PF00528 Binding-protein-dependent transport system inner membrane component LK685_06240 PF00005 ABC transporter LK685_06245 PF00296 Luciferase-like monooxygenase LK685_06250 PF00462 Glutaredoxin LK685_06255 PF00296 Luciferase-like monooxygenase LK685_06260 PF01687 Riboflavin kinase LK685_06265 PF01546 Peptidase family M20/M25/M40 LK685_06265 PF07687 Peptidase dimerisation domain LK685_06270 PF01925 Sulfite exporter TauE/SafE LK685_06275 PF03061 Thioesterase superfamily LK685_06275 PF07085 DRTGG domain LK685_06275 PF00392 Bacterial regulatory proteins, gntR family LK685_06275 PF00571 CBS domain LK685_06280 PF14007 YtpI-like protein LK685_06285 PF02272 DHHA1 domain LK685_06285 PF01368 DHH family LK685_06300 PF14034 Sporulation protein YtrH LK685_06305 PF01336 OB-fold nucleic acid binding domain LK685_06305 PF02811 PHP domain LK685_06305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LK685_06305 PF07733 Bacterial DNA polymerase III alpha NTPase domain LK685_06305 PF14579 Helix-hairpin-helix motif LK685_06310 PF03949 Malic enzyme, NAD binding domain LK685_06310 PF00390 Malic enzyme, N-terminal domain LK685_06315 PF17848 Acetyl-coA carboxylase zinc finger domain LK685_06315 PF01039 Carboxyl transferase domain LK685_06320 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LK685_06325 PF00365 Phosphofructokinase LK685_06330 PF00391 PEP-utilising enzyme, mobile domain LK685_06330 PF00224 Pyruvate kinase, barrel domain LK685_06330 PF02887 Pyruvate kinase, alpha/beta domain LK685_06335 PF04186 FxsA cytoplasmic membrane protein LK685_06340 PF01594 AI-2E family transporter LK685_06345 PF04284 Protein of unknown function (DUF441) LK685_06350 PF00285 Citrate synthase, C-terminal domain LK685_06355 PF00180 Isocitrate/isopropylmalate dehydrogenase LK685_06360 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LK685_06360 PF00056 lactate/malate dehydrogenase, NAD binding domain LK685_06365 PF00072 Response regulator receiver domain LK685_06365 PF00486 Transcriptional regulatory protein, C terminal LK685_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_06370 PF00512 His Kinase A (phospho-acceptor) domain LK685_06370 PF00989 PAS fold LK685_06370 PF16736 Single Cache-like LK685_06375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LK685_06375 PF00476 DNA polymerase family A LK685_06375 PF01367 5'-3' exonuclease, C-terminal SAM fold LK685_06380 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LK685_06380 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LK685_06380 PF06827 Zinc finger found in FPG and IleRS LK685_06385 PF02659 Putative manganese efflux pump LK685_06390 PF01121 Dephospho-CoA kinase LK685_06395 PF00248 Aldo/keto reductase family LK685_06400 PF07690 Major Facilitator Superfamily LK685_06405 PF01638 HxlR-like helix-turn-helix LK685_06410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LK685_06410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LK685_06415 PF02675 S-adenosylmethionine decarboxylase LK685_06420 PF03477 ATP cone domain LK685_06425 PF07261 Replication initiation and membrane attachment LK685_06430 PF07319 Primosomal protein DnaI N-terminus LK685_06430 PF01695 IstB-like ATP binding protein LK685_06435 PF09335 SNARE associated Golgi protein LK685_06440 PF08812 YtxC-like family LK685_06445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK685_06445 PF03129 Anticodon binding domain LK685_06445 PF02824 TGS domain LK685_06445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK685_06450 PF13419 Haloacid dehalogenase-like hydrolase LK685_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_06455 PF06580 Histidine kinase LK685_06455 PF07694 5TMR of 5TMR-LYT LK685_06460 PF04397 LytTr DNA-binding domain LK685_06460 PF00072 Response regulator receiver domain LK685_06465 PF03788 LrgA family LK685_06470 PF04172 LrgB-like family LK685_06480 PF00707 Translation initiation factor IF-3, C-terminal domain LK685_06480 PF05198 Translation initiation factor IF-3, N-terminal domain LK685_06485 PF01632 Ribosomal protein L35 LK685_06490 PF00453 Ribosomal protein L20 LK685_06495 PF06961 Protein of unknown function (DUF1294) LK685_06505 PF05343 M42 glutamyl aminopeptidase LK685_06510 PF04616 Glycosyl hydrolases family 43 LK685_06515 PF11762 L-arabinose isomerase C-terminal domain LK685_06515 PF02610 L-arabinose isomerase LK685_06520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK685_06520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK685_06525 PF00596 Class II Aldolase and Adducin N-terminal domain LK685_06530 PF13344 Haloacid dehalogenase-like hydrolase LK685_06535 PF13685 Iron-containing alcohol dehydrogenase LK685_06540 PF01547 Bacterial extracellular solute-binding protein LK685_06545 PF00528 Binding-protein-dependent transport system inner membrane component LK685_06550 PF00528 Binding-protein-dependent transport system inner membrane component LK685_06555 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LK685_06560 PF13722 5TM C-terminal transporter carbon starvation CstA LK685_06560 PF02554 Carbon starvation protein CstA LK685_06570 PF12681 Glyoxalase-like domain LK685_06575 PF13183 4Fe-4S dicluster domain LK685_06575 PF02754 Cysteine-rich domain LK685_06580 PF02913 FAD linked oxidases, C-terminal domain LK685_06580 PF01565 FAD binding domain LK685_06585 PF05651 Putative sugar diacid recognition LK685_06585 PF17853 GGDEF-like domain LK685_06585 PF13556 PucR C-terminal helix-turn-helix domain LK685_06590 PF14098 Small, acid-soluble spore protein I LK685_06595 PF00588 SpoU rRNA Methylase family LK685_06595 PF08032 RNA 2'-O ribose methyltransferase substrate binding LK685_06605 PF01409 tRNA synthetases class II core domain (F) LK685_06605 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LK685_06610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LK685_06610 PF01588 Putative tRNA binding domain LK685_06610 PF03484 tRNA synthetase B5 domain LK685_06610 PF03483 B3/4 domain LK685_06610 PF03147 Ferredoxin-fold anticodon binding domain LK685_06615 PF11858 Domain of unknown function (DUF3378) LK685_06615 PF01351 Ribonuclease HII LK685_06620 PF05164 Cell division protein ZapA LK685_06625 PF02674 Colicin V production protein LK685_06630 PF14716 Helix-hairpin-helix domain LK685_06630 PF02811 PHP domain LK685_06630 PF14791 DNA polymerase beta thumb LK685_06635 PF00488 MutS domain V LK685_06635 PF01713 Smr domain LK685_06640 PF03994 Domain of Unknown Function (DUF350) LK685_06645 PF00501 AMP-binding enzyme LK685_06645 PF13193 AMP-binding enzyme C-terminal domain LK685_06650 PF00440 Bacterial regulatory proteins, tetR family LK685_06650 PF08359 YsiA-like protein, C-terminal region LK685_06655 PF00378 Enoyl-CoA hydratase/isomerase LK685_06660 PF01012 Electron transfer flavoprotein domain LK685_06665 PF00766 Electron transfer flavoprotein FAD-binding domain LK685_06665 PF01012 Electron transfer flavoprotein domain LK685_06670 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LK685_06675 PF00085 Thioredoxin LK685_06680 PF08459 UvrC Helix-hairpin-helix N-terminal LK685_06680 PF02151 UvrB/uvrC motif LK685_06680 PF01541 GIY-YIG catalytic domain LK685_06685 PF13840 ACT domain LK685_06685 PF01842 ACT domain LK685_06685 PF00696 Amino acid kinase family LK685_06690 PF10702 Protein of unknown function (DUF2507) LK685_06695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LK685_06700 PF00890 FAD binding domain LK685_06700 PF02910 Fumarate reductase flavoprotein C-term LK685_06705 PF13183 4Fe-4S dicluster domain LK685_06705 PF13085 2Fe-2S iron-sulfur cluster binding domain LK685_06710 PF03061 Thioesterase superfamily LK685_06715 PF00196 Bacterial regulatory proteins, luxR family LK685_06720 PF01047 MarR family LK685_06725 PF01177 Asp/Glu/Hydantoin racemase LK685_06730 PF10646 Sporulation and spore germination LK685_06735 PF01138 3' exoribonuclease family, domain 1 LK685_06735 PF03725 3' exoribonuclease family, domain 2 LK685_06740 PF01725 Ham1 family LK685_06745 PF12850 Calcineurin-like phosphoesterase superfamily domain LK685_06755 PF09557 Domain of unknown function (DUF2382) LK685_06755 PF11181 Heat induced stress protein YflT LK685_06760 PF00583 Acetyltransferase (GNAT) family LK685_06770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK685_06770 PF00205 Thiamine pyrophosphate enzyme, central domain LK685_06770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK685_06775 PF10369 Small subunit of acetolactate synthase LK685_06775 PF01842 ACT domain LK685_06780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LK685_06780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LK685_06785 PF08502 LeuA allosteric (dimerisation) domain LK685_06785 PF00682 HMGL-like LK685_06790 PF00180 Isocitrate/isopropylmalate dehydrogenase LK685_06795 PF00330 Aconitase family (aconitate hydratase) LK685_06800 PF00694 Aconitase C-terminal domain LK685_06810 PF05697 Bacterial trigger factor protein (TF) LK685_06810 PF05698 Bacterial trigger factor protein (TF) C-terminus LK685_06810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK685_06815 PF10431 C-terminal, D2-small domain, of ClpB protein LK685_06815 PF06689 ClpX C4-type zinc finger LK685_06815 PF07724 AAA domain (Cdc48 subfamily) LK685_06820 PF00004 ATPase family associated with various cellular activities (AAA) LK685_06820 PF05362 Lon protease (S16) C-terminal proteolytic domain LK685_06825 PF00004 ATPase family associated with various cellular activities (AAA) LK685_06825 PF05362 Lon protease (S16) C-terminal proteolytic domain LK685_06825 PF02190 ATP-dependent protease La (LON) substrate-binding domain LK685_06830 PF01926 50S ribosome-binding GTPase LK685_06840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LK685_06840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LK685_06840 PF01488 Shikimate / quinate 5-dehydrogenase LK685_06845 PF01578 Cytochrome C assembly protein LK685_06850 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LK685_06850 PF03900 Porphobilinogen deaminase, C-terminal domain LK685_06855 PF02602 Uroporphyrinogen-III synthase HemD LK685_06860 PF00490 Delta-aminolevulinic acid dehydratase LK685_06865 PF00202 Aminotransferase class-III LK685_06870 PF01476 LysM domain LK685_06885 PF00133 tRNA synthetases class I (I, L, M and V) LK685_06885 PF08264 Anticodon-binding domain of tRNA LK685_06885 PF10458 Valyl tRNA synthetase tRNA binding arm LK685_06890 PF02875 Mur ligase family, glutamate ligase domain LK685_06890 PF08245 Mur ligase middle domain LK685_06895 PF06750 Bacterial Peptidase A24 N-terminal domain LK685_06895 PF01478 Type IV leader peptidase family LK685_06900 PF05036 Sporulation related domain LK685_06905 PF02545 Maf-like protein LK685_06910 PF00633 Helix-hairpin-helix motif LK685_06910 PF04002 RadC-like JAB domain LK685_06920 PF04085 rod shape-determining protein MreC LK685_06925 PF04093 rod shape-determining protein MreD LK685_06930 PF03775 Septum formation inhibitor MinC, C-terminal domain LK685_06935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LK685_06940 PF01551 Peptidase family M23 LK685_06945 PF02163 Peptidase family M50 LK685_06950 PF00829 Ribosomal prokaryotic L21 protein LK685_06955 PF04327 Cysteine protease Prp LK685_06960 PF01016 Ribosomal L27 protein LK685_06970 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LK685_06970 PF14682 Sporulation initiation phospho-transferase B, C-terminal LK685_06975 PF09269 Domain of unknown function (DUF1967) LK685_06975 PF01018 GTP1/OBG LK685_06975 PF01926 50S ribosome-binding GTPase LK685_06980 PF01842 ACT domain LK685_06985 PF00800 Prephenate dehydratase LK685_06985 PF01842 ACT domain LK685_06990 PF08279 HTH domain LK685_06990 PF02829 3H domain LK685_06995 PF00266 Aminotransferase class-V LK685_07000 PF00890 FAD binding domain LK685_07000 PF02910 Fumarate reductase flavoprotein C-term LK685_07005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LK685_07005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LK685_07010 PF02445 Quinolinate synthetase A protein LK685_07015 PF01476 LysM domain LK685_07020 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LK685_07025 PF01709 Transcriptional regulator LK685_07030 PF01235 Sodium:alanine symporter family LK685_07055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_07055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_07060 PF07690 Major Facilitator Superfamily LK685_07065 PF08977 Bypass of Forespore C, N terminal LK685_07065 PF08955 BofC C-terminal domain LK685_07070 PF01330 RuvA N terminal domain LK685_07070 PF07499 RuvA, C-terminal domain LK685_07075 PF17864 RuvB AAA lid domain LK685_07075 PF05496 Holliday junction DNA helicase RuvB P-loop domain LK685_07075 PF05491 RuvB C-terminal winged helix domain LK685_07080 PF11146 Protein of unknown function (DUF2905) LK685_07085 PF02547 Queuosine biosynthesis protein LK685_07090 PF01702 Queuine tRNA-ribosyltransferase LK685_07095 PF02699 Preprotein translocase subunit LK685_07100 PF12670 Protein of unknown function (DUF3792) LK685_07105 PF04239 Protein of unknown function (DUF421) LK685_07110 PF14667 Polysaccharide biosynthesis C-terminal domain LK685_07110 PF01943 Polysaccharide biosynthesis protein LK685_07115 PF13797 Post-transcriptional regulator LK685_07120 PF02355 Protein export membrane protein LK685_07120 PF07549 SecD/SecF GG Motif LK685_07125 PF02080 TrkA-C domain LK685_07130 PF06305 Lipopolysaccharide assembly protein A domain LK685_07135 PF01368 DHH family LK685_07135 PF02272 DHHA1 domain LK685_07135 PF17768 RecJ OB domain LK685_07135 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LK685_07140 PF00156 Phosphoribosyl transferase domain LK685_07145 PF04607 Region found in RelA / SpoT proteins LK685_07145 PF02824 TGS domain LK685_07145 PF13291 ACT domain LK685_07150 PF02580 D-Tyr-tRNA(Tyr) deacylase LK685_07155 PF01520 N-acetylmuramoyl-L-alanine amidase LK685_07155 PF08239 Bacterial SH3 domain LK685_07160 PF17449 Uncharacterized YrzK-like LK685_07165 PF13393 Histidyl-tRNA synthetase LK685_07165 PF03129 Anticodon binding domain LK685_07170 PF02938 GAD domain LK685_07170 PF01336 OB-fold nucleic acid binding domain LK685_07170 PF00152 tRNA synthetases class II (D, K and N) LK685_07180 PF00899 ThiF family LK685_07185 PF12002 MgsA AAA+ ATPase C terminal LK685_07185 PF05496 Holliday junction DNA helicase RuvB P-loop domain LK685_07185 PF16193 AAA C-terminal domain LK685_07190 PF02082 Transcriptional regulator LK685_07195 PF00266 Aminotransferase class-V LK685_07205 PF13181 Tetratricopeptide repeat LK685_07205 PF07719 Tetratricopeptide repeat LK685_07210 PF14490 Helix-hairpin-helix containing domain LK685_07210 PF13538 UvrD-like helicase C-terminal domain LK685_07210 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LK685_07215 PF05239 PRC-barrel domain LK685_07225 PF13056 Protein of unknown function (DUF3918) LK685_07230 PF00528 Binding-protein-dependent transport system inner membrane component LK685_07235 PF00528 Binding-protein-dependent transport system inner membrane component LK685_07240 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK685_07245 PF00005 ABC transporter LK685_07250 PF01594 AI-2E family transporter LK685_07255 PF02272 DHHA1 domain LK685_07255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK685_07255 PF01411 tRNA synthetases class II (A) LK685_07260 PF06135 IreB regulatory phosphoprotein LK685_07265 PF03652 Holliday junction resolvase LK685_07270 PF06949 Protein of unknown function (DUF1292) LK685_07275 PF02618 YceG-like family LK685_07280 PF01596 O-methyltransferase LK685_07285 PF01136 Peptidase family U32 LK685_07290 PF16325 Peptidase family U32 C-terminal domain LK685_07290 PF01136 Peptidase family U32 LK685_07295 PF00485 Phosphoribulokinase / Uridine kinase family LK685_07300 PF03449 Transcription elongation factor, N-terminal LK685_07300 PF01272 Transcription elongation factor, GreA/GreB, C-term LK685_07305 PF03717 Penicillin-binding Protein dimerisation domain LK685_07305 PF00905 Penicillin binding protein transpeptidase domain LK685_07310 PF07423 Domain of unknown function (DUF1510) LK685_07315 PF10750 Protein of unknown function (DUF2536) LK685_07320 PF13649 Methyltransferase domain LK685_07325 PF01048 Phosphorylase superfamily LK685_07330 PF00291 Pyridoxal-phosphate dependent enzyme LK685_07335 PF01053 Cys/Met metabolism PLP-dependent enzyme LK685_07340 PF14143 YrhC-like protein LK685_07345 PF07849 Protein of unknown function (DUF1641) LK685_07350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LK685_07350 PF01568 Molydopterin dinucleotide binding domain LK685_07350 PF00384 Molybdopterin oxidoreductase LK685_07350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK685_07350 PF00037 4Fe-4S binding domain LK685_07355 PF10057 Uncharacterized conserved protein (DUF2294) LK685_07360 PF01226 Formate/nitrite transporter LK685_07365 PF09501 Probable sporulation protein (Bac_small_yrzI) LK685_07375 PF08241 Methyltransferase domain LK685_07380 PF16295 Tetracyclin repressor-like, C-terminal domain LK685_07380 PF00440 Bacterial regulatory proteins, tetR family LK685_07385 PF00175 Oxidoreductase NAD-binding domain LK685_07385 PF00667 FAD binding domain LK685_07385 PF00258 Flavodoxin LK685_07385 PF00067 Cytochrome P450 LK685_07390 PF14145 YrhK-like protein LK685_07395 PF01757 Acyltransferase family LK685_07400 PF11738 Protein of unknown function (DUF3298) LK685_07400 PF13739 Deacetylase PdaC LK685_07410 PF11495 Archaeal transcriptional regulator TrmB LK685_07410 PF01978 Sugar-specific transcriptional regulator TrmB LK685_07415 PF01810 LysE type translocator LK685_07420 PF00324 Amino acid permease LK685_07430 PF00874 PRD domain LK685_07430 PF00158 Sigma-54 interaction domain LK685_07430 PF03610 PTS system fructose IIA component LK685_07435 PF03610 PTS system fructose IIA component LK685_07440 PF03830 PTS system sorbose subfamily IIB component LK685_07445 PF03609 PTS system sorbose-specific iic component LK685_07450 PF03613 PTS system mannose/fructose/sorbose family IID component LK685_07460 PF08244 Glycosyl hydrolases family 32 C terminal LK685_07460 PF00251 Glycosyl hydrolases family 32 N-terminal domain LK685_07465 PF01965 DJ-1/PfpI family LK685_07470 PF00107 Zinc-binding dehydrogenase LK685_07470 PF08240 Alcohol dehydrogenase GroES-like domain LK685_07480 PF13411 MerR HTH family regulatory protein LK685_07485 PF07875 Coat F domain LK685_07495 PF00107 Zinc-binding dehydrogenase LK685_07495 PF08240 Alcohol dehydrogenase GroES-like domain LK685_07495 PF13823 Alcohol dehydrogenase GroES-associated LK685_07500 PF07875 Coat F domain LK685_07510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_07530 PF00561 alpha/beta hydrolase fold LK685_07540 PF01374 Glycosyl hydrolase family 46 LK685_07545 PF04303 PrpF protein LK685_07550 PF03466 LysR substrate binding domain LK685_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_07555 PF03600 Citrate transporter LK685_07560 PF00248 Aldo/keto reductase family LK685_07565 PF04542 Sigma-70 region 2 LK685_07565 PF08281 Sigma-70, region 4 LK685_07570 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LK685_07580 PF09680 Family of unknown function LK685_07585 PF15493 Domain of unknown function, YrpD LK685_07590 PF01177 Asp/Glu/Hydantoin racemase LK685_07595 PF03060 Nitronate monooxygenase LK685_07600 PF04439 Streptomycin adenylyltransferase LK685_07605 PF05163 DinB family LK685_07615 PF10823 Protein of unknown function (DUF2568) LK685_07620 PF00857 Isochorismatase family LK685_07630 PF00067 Cytochrome P450 LK685_07635 PF01337 Barstar (barnase inhibitor) LK685_07640 PF01037 Lrp/AsnC ligand binding domain LK685_07645 PF03591 AzlC protein LK685_07650 PF05437 Branched-chain amino acid transport protein (AzlD) LK685_07655 PF05525 Branched-chain amino acid transport protein LK685_07665 PF03466 LysR substrate binding domain LK685_07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_07670 PF14552 Tautomerase enzyme LK685_07675 PF16916 Dimerisation domain of Zinc Transporter LK685_07675 PF01545 Cation efflux family LK685_07685 PF03466 LysR substrate binding domain LK685_07685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_07690 PF00892 EamA-like transporter family LK685_07695 PF14142 YrzO-like protein LK685_07700 PF01595 Cyclin M transmembrane N-terminal domain LK685_07700 PF03471 Transporter associated domain LK685_07700 PF00571 CBS domain LK685_07705 PF00583 Acetyltransferase (GNAT) family LK685_07710 PF07690 Major Facilitator Superfamily LK685_07715 PF13411 MerR HTH family regulatory protein LK685_07715 PF06445 GyrI-like small molecule binding domain LK685_07730 PF07883 Cupin domain LK685_07740 PF02583 Metal-sensitive transcriptional repressor LK685_07745 PF13686 DsrE/DsrF/DrsH-like family LK685_07755 PF01206 Sulfurtransferase TusA LK685_07755 PF00581 Rhodanese-like domain LK685_07770 PF01206 Sulfurtransferase TusA LK685_07775 PF01925 Sulfite exporter TauE/SafE LK685_07780 PF13787 Protein of unknown function with HXXEE motif LK685_07785 PF02525 Flavodoxin-like fold LK685_07790 PF00583 Acetyltransferase (GNAT) family LK685_07800 PF04235 Protein of unknown function (DUF418) LK685_07805 PF00072 Response regulator receiver domain LK685_07805 PF00486 Transcriptional regulatory protein, C terminal LK685_07810 PF00512 His Kinase A (phospho-acceptor) domain LK685_07815 PF06146 Phosphate-starvation-inducible E LK685_07840 PF06114 IrrE N-terminal-like domain LK685_07880 PF17356 Phage-like element PBSX protein XtrA LK685_07885 PF03527 RHS protein LK685_07955 PF01510 N-acetylmuramoyl-L-alanine amidase LK685_07955 PF01471 Putative peptidoglycan binding domain LK685_07965 PF04740 LXG domain of WXG superfamily LK685_07980 PF00248 Aldo/keto reductase family LK685_07990 PF18801 response regulator aspartate phosphatase H, N terminal LK685_07990 PF13176 Tetratricopeptide repeat LK685_08000 PF01022 Bacterial regulatory protein, arsR family LK685_08005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_08010 PF01758 Sodium Bile acid symporter family LK685_08015 PF01451 Low molecular weight phosphotyrosine protein phosphatase LK685_08025 PF00107 Zinc-binding dehydrogenase LK685_08025 PF08240 Alcohol dehydrogenase GroES-like domain LK685_08050 PF04545 Sigma-70, region 4 LK685_08050 PF04542 Sigma-70 region 2 LK685_08055 PF14040 Deoxyribonuclease NucA/NucB LK685_08065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK685_08065 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LK685_08070 PF09335 SNARE associated Golgi protein LK685_08075 PF01510 N-acetylmuramoyl-L-alanine amidase LK685_08075 PF01471 Putative peptidoglycan binding domain LK685_08080 PF00657 GDSL-like Lipase/Acylhydrolase LK685_08085 PF08970 Sporulation inhibitor A LK685_08095 PF01926 50S ribosome-binding GTPase LK685_08100 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LK685_08100 PF01488 Shikimate / quinate 5-dehydrogenase LK685_08100 PF08501 Shikimate dehydrogenase substrate binding domain LK685_08105 PF01985 CRS1 / YhbY (CRM) domain LK685_08110 PF01467 Cytidylyltransferase-like LK685_08115 PF01966 HD domain LK685_08125 PF13649 Methyltransferase domain LK685_08130 PF14748 Pyrroline-5-carboxylate reductase dimerisation LK685_08130 PF03807 NADP oxidoreductase coenzyme F420-dependent LK685_08135 PF10531 SLBB domain LK685_08140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK685_08145 PF00753 Metallo-beta-lactamase superfamily LK685_08145 PF13567 Domain of unknown function (DUF4131) LK685_08145 PF03772 Competence protein LK685_08150 PF14141 YqzM-like protein LK685_08160 PF06144 DNA polymerase III, delta subunit LK685_08165 PF01649 Ribosomal protein S20 LK685_08170 PF03418 Germination protease LK685_08175 PF07454 Stage II sporulation protein P (SpoIIP) LK685_08180 PF12438 Protein of unknown function (DUF3679) LK685_08185 PF00679 Elongation factor G C-terminus LK685_08185 PF00009 Elongation factor Tu GTP binding domain LK685_08185 PF03144 Elongation factor Tu domain 2 LK685_08185 PF06421 GTP-binding protein LepA C-terminus LK685_08190 PF04055 Radical SAM superfamily LK685_08190 PF06969 HemN C-terminal domain LK685_08195 PF01628 HrcA protein C terminal domain LK685_08200 PF01025 GrpE LK685_08205 PF00012 Hsp70 protein LK685_08210 PF00684 DnaJ central domain LK685_08210 PF01556 DnaJ C terminal domain LK685_08210 PF00226 DnaJ domain LK685_08220 PF04452 RNA methyltransferase LK685_08225 PF04055 Radical SAM superfamily LK685_08225 PF00919 Uncharacterized protein family UPF0004 LK685_08225 PF01938 TRAM domain LK685_08230 PF02690 Na+/Pi-cotransporter LK685_08235 PF01165 Ribosomal protein S21 LK685_08240 PF09424 Yqey-like protein LK685_08245 PF01957 NfeD-like C-terminal, partner-binding LK685_08245 PF01972 Serine dehydrogenase proteinase LK685_08250 PF12127 SigmaW regulon antibacterial LK685_08260 PF07873 YabP family LK685_08265 PF06898 Putative stage IV sporulation protein YqfD LK685_08270 PF02562 PhoH-like protein LK685_08275 PF01966 HD domain LK685_08275 PF07697 7TM-HD extracellular LK685_08275 PF07698 7TM receptor with intracellular HD hydrolase LK685_08280 PF02130 Uncharacterized protein family UPF0054 LK685_08285 PF01219 Prokaryotic diacylglycerol kinase LK685_08290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK685_08295 PF01926 50S ribosome-binding GTPase LK685_08295 PF07650 KH domain LK685_08300 PF14006 YqzL-like protein LK685_08305 PF11967 Recombination protein O N terminal LK685_08305 PF02565 Recombination protein O C terminal LK685_08310 PF02091 Glycyl-tRNA synthetase alpha subunit LK685_08315 PF02092 Glycyl-tRNA synthetase beta subunit LK685_08320 PF00571 CBS domain LK685_08320 PF08279 HTH domain LK685_08325 PF03618 Kinase/pyrophosphorylase LK685_08330 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LK685_08335 PF01807 CHC2 zinc finger LK685_08335 PF10410 DnaB-helicase binding domain of primase LK685_08335 PF08275 DNA primase catalytic core, N-terminal domain LK685_08340 PF03979 Sigma-70 factor, region 1.1 LK685_08340 PF00140 Sigma-70 factor, region 1.2 LK685_08340 PF04539 Sigma-70 region 3 LK685_08340 PF04545 Sigma-70, region 4 LK685_08340 PF04542 Sigma-70 region 2 LK685_08345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK685_08350 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LK685_08355 PF01784 NIF3 (NGG1p interacting factor 3) LK685_08360 PF02401 LytB protein LK685_08365 PF14181 YqfQ-like protein LK685_08370 PF00271 Helicase conserved C-terminal domain LK685_08370 PF00270 DEAD/DEAH box helicase LK685_08375 PF01261 Xylose isomerase-like TIM barrel LK685_08380 PF11116 Protein of unknown function (DUF2624) LK685_08385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LK685_08385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LK685_08390 PF01475 Ferric uptake regulator family LK685_08405 PF04551 GcpE protein LK685_08420 PF06691 Protein of unknown function (DUF1189) LK685_08425 PF04306 Protein of unknown function (DUF456) LK685_08430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LK685_08430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LK685_08435 PF07690 Major Facilitator Superfamily LK685_08440 PF03717 Penicillin-binding Protein dimerisation domain LK685_08440 PF00905 Penicillin binding protein transpeptidase domain LK685_08445 PF12849 PBP superfamily domain LK685_08450 PF00528 Binding-protein-dependent transport system inner membrane component LK685_08455 PF00528 Binding-protein-dependent transport system inner membrane component LK685_08460 PF00005 ABC transporter LK685_08465 PF00005 ABC transporter LK685_08485 PF00534 Glycosyl transferases group 1 LK685_08485 PF13439 Glycosyltransferase Family 4 LK685_08490 PF00471 Ribosomal protein L33 LK685_08495 PF01812 5-formyltetrahydrofolate cyclo-ligase family LK685_08505 PF01694 Rhomboid family LK685_08510 PF06014 Bacterial protein of unknown function (DUF910) LK685_08515 PF00480 ROK family LK685_08520 PF00884 Sulfatase LK685_08525 PF00246 Zinc carboxypeptidase LK685_08535 PF01910 Thiamine-binding protein LK685_08540 PF10958 Protein of unknown function (DUF2759) LK685_08545 PF00753 Metallo-beta-lactamase superfamily LK685_08550 PF11117 Protein of unknown function (DUF2626) LK685_08555 PF03960 ArsC family LK685_08565 PF01740 STAS domain LK685_08565 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LK685_08570 PF03471 Transporter associated domain LK685_08570 PF01595 Cyclin M transmembrane N-terminal domain LK685_08570 PF00571 CBS domain LK685_08575 PF01544 CorA-like Mg2+ transporter protein LK685_08580 PF00437 Type II/IV secretion system protein LK685_08585 PF00482 Type II secretion system (T2SS), protein F LK685_08590 PF07963 Prokaryotic N-terminal methylation motif LK685_08595 PF07963 Prokaryotic N-terminal methylation motif LK685_08605 PF15980 Putative Competence protein ComGF LK685_08610 PF14173 ComG operon protein 7 LK685_08615 PF14038 YqzE-like protein LK685_08620 PF13028 Protein of unknown function (DUF3889) LK685_08635 PF12389 Camelysin metallo-endopeptidase LK685_08640 PF08671 Anti-repressor SinI LK685_08640 PF01381 Helix-turn-helix LK685_08645 PF08671 Anti-repressor SinI LK685_08650 PF11079 Bacterial protein YqhG of unknown function LK685_08655 PF00176 SNF2 family N-terminal domain LK685_08655 PF00271 Helicase conserved C-terminal domain LK685_08660 PF01571 Aminomethyltransferase folate-binding domain LK685_08660 PF08669 Glycine cleavage T-protein C-terminal barrel domain LK685_08665 PF02347 Glycine cleavage system P-protein LK685_08670 PF02347 Glycine cleavage system P-protein LK685_08675 PF00581 Rhodanese-like domain LK685_08680 PF03099 Biotin/lipoate A/B protein ligase family LK685_08685 PF01325 Iron dependent repressor, N-terminal DNA binding domain LK685_08685 PF02742 Iron dependent repressor, metal binding and dimerisation domain LK685_08690 PF01734 Patatin-like phospholipase LK685_08700 PF07136 Protein of unknown function (DUF1385) LK685_08705 PF11085 Conserved membrane protein YqhR LK685_08710 PF01220 Dehydroquinase class II LK685_08715 PF00557 Metallopeptidase family M24 LK685_08715 PF01321 Creatinase/Prolidase N-terminal domain LK685_08720 PF01132 Elongation factor P (EF-P) OB domain LK685_08720 PF09285 Elongation factor P, C-terminal LK685_08720 PF08207 Elongation factor P (EF-P) KOW-like domain LK685_08725 PF10942 Protein of unknown function (DUF2619) LK685_08735 PF09548 Stage III sporulation protein AB (spore_III_AB) LK685_08740 PF06686 Stage III sporulation protein AC/AD protein family LK685_08745 PF06686 Stage III sporulation protein AC/AD protein family LK685_08750 PF09546 Stage III sporulation protein AE (spore_III_AE) LK685_08755 PF09581 Stage III sporulation protein AF (Spore_III_AF) LK685_08765 PF12685 SpoIIIAH-like protein LK685_08770 PF00364 Biotin-requiring enzyme LK685_08775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK685_08775 PF02785 Biotin carboxylase C-terminal domain LK685_08775 PF00289 Biotin carboxylase, N-terminal domain LK685_08780 PF03780 Asp23 family, cell envelope-related function LK685_08785 PF01029 NusB family LK685_08790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LK685_08790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LK685_08795 PF13742 OB-fold nucleic acid binding domain LK685_08795 PF02601 Exonuclease VII, large subunit LK685_08800 PF02609 Exonuclease VII small subunit LK685_08805 PF00348 Polyprenyl synthetase LK685_08810 PF02780 Transketolase, C-terminal domain LK685_08810 PF02779 Transketolase, pyrimidine binding domain LK685_08810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LK685_08815 PF01479 S4 domain LK685_08815 PF01728 FtsJ-like methyltransferase LK685_08820 PF01316 Arginine repressor, DNA binding domain LK685_08820 PF02863 Arginine repressor, C-terminal domain LK685_08825 PF13476 AAA domain LK685_08830 PF17820 PDZ domain LK685_08830 PF05580 SpoIVB peptidase S55 LK685_08835 PF00072 Response regulator receiver domain LK685_08835 PF08769 Sporulation initiation factor Spo0A C terminal LK685_08840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK685_08855 PF01520 N-acetylmuramoyl-L-alanine amidase LK685_08860 PF03009 Glycerophosphoryl diester phosphodiesterase family LK685_08865 PF02803 Thiolase, C-terminal domain LK685_08865 PF00108 Thiolase, N-terminal domain LK685_08870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK685_08870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK685_08875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK685_08875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK685_08875 PF02770 Acyl-CoA dehydrogenase, middle domain LK685_08880 PF00285 Citrate synthase, C-terminal domain LK685_08885 PF03972 MmgE/PrpD family LK685_08895 PF11118 Protein of unknown function (DUF2627) LK685_08900 PF00158 Sigma-54 interaction domain LK685_08900 PF02954 Bacterial regulatory protein, Fis family LK685_08900 PF00989 PAS fold LK685_08905 PF01515 Phosphate acetyl/butaryl transferase LK685_08910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LK685_08910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LK685_08915 PF00871 Acetokinase family LK685_08920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK685_08920 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_08925 PF00676 Dehydrogenase E1 component LK685_08930 PF02779 Transketolase, pyrimidine binding domain LK685_08930 PF02780 Transketolase, C-terminal domain LK685_08935 PF00364 Biotin-requiring enzyme LK685_08935 PF02817 e3 binding domain LK685_08935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK685_08940 PF06445 GyrI-like small molecule binding domain LK685_08940 PF13411 MerR HTH family regulatory protein LK685_08945 PF07690 Major Facilitator Superfamily LK685_08950 PF00781 Diacylglycerol kinase catalytic domain LK685_08955 PF06491 Disulphide isomerase LK685_08960 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK685_08965 PF00528 Binding-protein-dependent transport system inner membrane component LK685_08970 PF00005 ABC transporter LK685_08975 PF11728 Putative aromatic acid exporter C-terminal domain LK685_08975 PF06081 Aromatic acid exporter family member 1 LK685_08980 PF03734 L,D-transpeptidase catalytic domain LK685_08995 PF01039 Carboxyl transferase domain LK685_09000 PF07687 Peptidase dimerisation domain LK685_09000 PF01546 Peptidase family M20/M25/M40 LK685_09005 PF09844 Uncharacterized conserved protein (COG2071) LK685_09010 PF02096 60Kd inner membrane protein LK685_09020 PF11798 IMS family HHH motif LK685_09020 PF00817 impB/mucB/samB family LK685_09020 PF11799 impB/mucB/samB family C-terminal domain LK685_09025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK685_09025 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LK685_09030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LK685_09030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LK685_09035 PF12706 Beta-lactamase superfamily domain LK685_09040 PF00471 Ribosomal protein L33 LK685_09045 PF12146 Serine aminopeptidase, S33 LK685_09050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK685_09055 PF01546 Peptidase family M20/M25/M40 LK685_09060 PF03807 NADP oxidoreductase coenzyme F420-dependent LK685_09060 PF14748 Pyrroline-5-carboxylate reductase dimerisation LK685_09065 PF00753 Metallo-beta-lactamase superfamily LK685_09070 PF00106 short chain dehydrogenase LK685_09075 PF00291 Pyridoxal-phosphate dependent enzyme LK685_09080 PF00485 Phosphoribulokinase / Uridine kinase family LK685_09100 PF07690 Major Facilitator Superfamily LK685_09105 PF14164 YqzH-like protein LK685_09110 PF00817 impB/mucB/samB family LK685_09110 PF11799 impB/mucB/samB family C-terminal domain LK685_09115 PF08863 YolD-like protein LK685_09120 PF00583 Acetyltransferase (GNAT) family LK685_09125 PF03992 Antibiotic biosynthesis monooxygenase LK685_09130 PF04229 GrpB protein LK685_09130 PF13673 Acetyltransferase (GNAT) domain LK685_09135 PF01521 Iron-sulphur cluster biosynthesis LK685_09140 PF10827 Protein of unknown function (DUF2552) LK685_09145 PF12146 Serine aminopeptidase, S33 LK685_09150 PF13025 Protein of unknown function (DUF3886) LK685_09155 PF00248 Aldo/keto reductase family LK685_09160 PF13072 Mother cell inhibitor of FtsZ LK685_09165 PF00293 NUDIX domain LK685_09175 PF01381 Helix-turn-helix LK685_09180 PF17763 Glutaminase/Asparaginase C-terminal domain LK685_09180 PF00710 Asparaginase, N-terminal LK685_09185 PF10415 Fumarase C C-terminus LK685_09185 PF00206 Lyase LK685_09190 PF03553 Na+/H+ antiporter family LK685_09195 PF00390 Malic enzyme, N-terminal domain LK685_09195 PF03949 Malic enzyme, NAD binding domain LK685_09195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK685_09205 PF01944 Stage II sporulation protein M LK685_09210 PF01475 Ferric uptake regulator family LK685_09215 PF14004 Protein of unknown function (DUF4227) LK685_09220 PF02899 Phage integrase, N-terminal SAM-like domain LK685_09220 PF00589 Phage integrase family LK685_09225 PF01676 Metalloenzyme superfamily LK685_09230 PF01048 Phosphorylase superfamily LK685_09235 PF07943 Penicillin-binding protein 5, C-terminal domain LK685_09235 PF00768 D-alanyl-D-alanine carboxypeptidase LK685_09240 PF01740 STAS domain LK685_09245 PF13581 Histidine kinase-like ATPase domain LK685_09250 PF04545 Sigma-70, region 4 LK685_09250 PF04539 Sigma-70 region 3 LK685_09250 PF04542 Sigma-70 region 2 LK685_09255 PF12164 Stage V sporulation protein AA LK685_09260 PF13782 Stage V sporulation protein AB LK685_09265 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LK685_09270 PF07451 Stage V sporulation protein AD (SpoVAD) LK685_09275 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LK685_09280 PF14097 Stage V sporulation protein AE1 LK685_09285 PF03323 Bacillus/Clostridium GerA spore germination protein LK685_09290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LK685_09290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LK685_09295 PF06207 Protein of unknown function (DUF1002) LK685_09300 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LK685_09305 PF10676 Spore germination protein gerPA/gerPF LK685_09320 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) LK685_09330 PF10502 Signal peptidase, peptidase S26 LK685_09340 PF01872 RibD C-terminal domain LK685_09340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK685_09345 PF00677 Lumazine binding domain LK685_09350 PF00925 GTP cyclohydrolase II LK685_09350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LK685_09355 PF00885 6,7-dimethyl-8-ribityllumazine synthase LK685_09360 PF00583 Acetyltransferase (GNAT) family LK685_09365 PF03745 Domain of unknown function (DUF309) LK685_09370 PF02616 Segregation and condensation protein ScpA LK685_09375 PF04079 Segregation and condensation complex subunit ScpB LK685_09380 PF13047 Protein of unknown function (DUF3907) LK685_09385 PF00768 D-alanyl-D-alanine carboxypeptidase LK685_09385 PF07943 Penicillin-binding protein 5, C-terminal domain LK685_09390 PF07670 Nucleoside recognition LK685_09395 PF07670 Nucleoside recognition LK685_09400 PF00849 RNA pseudouridylate synthase LK685_09400 PF01479 S4 domain LK685_09405 PF00578 AhpC/TSA family LK685_09410 PF05140 ResB-like family LK685_09415 PF01578 Cytochrome C assembly protein LK685_09420 PF00072 Response regulator receiver domain LK685_09420 PF00486 Transcriptional regulatory protein, C terminal LK685_09425 PF00989 PAS fold LK685_09425 PF00512 His Kinase A (phospho-acceptor) domain LK685_09425 PF18698 Histidine kinase sensor domain LK685_09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_09425 PF00672 HAMP domain LK685_09430 PF08281 Sigma-70, region 4 LK685_09430 PF04542 Sigma-70 region 2 LK685_09440 PF01487 Type I 3-dehydroquinase LK685_09445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK685_09445 PF01842 ACT domain LK685_09445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK685_09450 PF12822 ECF transporter, substrate-specific component LK685_09460 PF14493 Helix-turn-helix domain LK685_09465 PF00271 Helicase conserved C-terminal domain LK685_09465 PF00270 DEAD/DEAH box helicase LK685_09470 PF02517 CPBP intramembrane metalloprotease LK685_09475 PF01476 LysM domain LK685_09480 PF10864 Protein of unknown function (DUF2663) LK685_09485 PF00149 Calcineurin-like phosphoesterase LK685_09490 PF05389 Negative regulator of genetic competence (MecA) LK685_09495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LK685_09495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LK685_09505 PF13367 PrsW family intramembrane metalloprotease LK685_09510 PF07486 Cell Wall Hydrolase LK685_09510 PF01471 Putative peptidoglycan binding domain LK685_09515 PF14620 YpeB sporulation LK685_09515 PF03413 Peptidase propeptide and YPEB domain LK685_09520 PF07238 PilZ domain LK685_09520 PF12945 Flagellar protein YcgR LK685_09525 PF17313 Family of unknown function (DUF5359) LK685_09530 PF02224 Cytidylate kinase LK685_09535 PF00575 S1 RNA binding domain LK685_09540 PF01070 FMN-dependent dehydrogenase LK685_09545 PF14140 YpzI-like protein LK685_09555 PF14045 YIEGIA protein LK685_09565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LK685_09565 PF01926 50S ribosome-binding GTPase LK685_09570 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LK685_09570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LK685_09575 PF10966 Protein of unknown function (DUF2768) LK685_09585 PF09547 Stage IV sporulation protein A (spore_IV_A) LK685_09590 PF00216 Bacterial DNA-binding protein LK685_09595 PF01227 GTP cyclohydrolase I LK685_09600 PF02081 Tryptophan RNA-binding attenuator protein LK685_09605 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LK685_09610 PF01209 ubiE/COQ5 methyltransferase family LK685_09615 PF00348 Polyprenyl synthetase LK685_09620 PF00334 Nucleoside diphosphate kinase LK685_09625 PF01739 CheR methyltransferase, SAM binding domain LK685_09625 PF03705 CheR methyltransferase, all-alpha domain LK685_09630 PF01264 Chorismate synthase LK685_09635 PF01761 3-dehydroquinate synthase LK685_09640 PF07736 Chorismate mutase type I LK685_09645 PF04715 Anthranilate synthase component I, N terminal region LK685_09645 PF00425 chorismate binding enzyme LK685_09650 PF00591 Glycosyl transferase family, a/b domain LK685_09650 PF02885 Glycosyl transferase family, helical bundle domain LK685_09655 PF00218 Indole-3-glycerol phosphate synthase LK685_09660 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LK685_09665 PF00291 Pyridoxal-phosphate dependent enzyme LK685_09670 PF00290 Tryptophan synthase alpha chain LK685_09675 PF00155 Aminotransferase class I and II LK685_09680 PF01842 ACT domain LK685_09680 PF02153 Prephenate dehydrogenase LK685_09685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LK685_09695 PF08858 IDEAL domain LK685_09695 PF08864 UPF0302 domain LK685_09700 PF10673 Protein of unknown function (DUF2487) LK685_09705 PF00355 Rieske [2Fe-2S] domain LK685_09710 PF00033 Cytochrome b/b6/petB LK685_09715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK685_09715 PF00032 Cytochrome b(C-terminal)/b6/petD LK685_09720 PF07187 Protein of unknown function (DUF1405) LK685_09725 PF09577 Sporulation protein YpjB (SpoYpjB) LK685_09730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LK685_09730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LK685_09735 PF03819 MazG nucleotide pyrophosphohydrolase domain LK685_09740 PF01113 Dihydrodipicolinate reductase, N-terminus LK685_09740 PF05173 Dihydrodipicolinate reductase, C-terminus LK685_09745 PF02142 MGS-like domain LK685_09750 PF02585 GlcNAc-PI de-N-acetylase LK685_09755 PF00534 Glycosyl transferases group 1 LK685_09755 PF13439 Glycosyltransferase Family 4 LK685_09760 PF01743 Poly A polymerase head domain LK685_09760 PF12627 Probable RNA and SrmB- binding site of polymerase A LK685_09760 PF13735 tRNA nucleotidyltransferase domain 2 putative LK685_09765 PF03099 Biotin/lipoate A/B protein ligase family LK685_09765 PF08279 HTH domain LK685_09765 PF02237 Biotin protein ligase C terminal domain LK685_09770 PF02548 Ketopantoate hydroxymethyltransferase LK685_09775 PF02569 Pantoate-beta-alanine ligase LK685_09780 PF02261 Aspartate decarboxylase LK685_09785 PF13307 Helicase C-terminal domain LK685_09785 PF00929 Exonuclease LK685_09785 PF04851 Type III restriction enzyme, res subunit LK685_09790 PF14084 Protein of unknown function (DUF4264) LK685_09795 PF03413 Peptidase propeptide and YPEB domain LK685_09795 PF17881 Domain of unknown function (DUF5590) LK685_09800 PF00155 Aminotransferase class I and II LK685_09805 PF00152 tRNA synthetases class II (D, K and N) LK685_09805 PF01336 OB-fold nucleic acid binding domain LK685_09810 PF07261 Replication initiation and membrane attachment LK685_09815 PF10576 Iron-sulfur binding domain of endonuclease III LK685_09815 PF00633 Helix-hairpin-helix motif LK685_09815 PF00730 HhH-GPD superfamily base excision DNA repair protein LK685_09825 PF00912 Transglycosylase LK685_09825 PF00905 Penicillin binding protein transpeptidase domain LK685_09830 PF03838 Recombination protein U LK685_09835 PF10720 Protein of unknown function (DUF2515) LK685_09845 PF17522 Family of unknown function (DUF5446) LK685_09850 PF08807 Bacterial domain of unknown function (DUF1798) LK685_09855 PF14178 YppF-like protein LK685_09860 PF14179 YppG-like protein LK685_09870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LK685_09875 PF00270 DEAD/DEAH box helicase LK685_09875 PF00271 Helicase conserved C-terminal domain LK685_09875 PF09369 Domain of unknown function (DUF1998) LK685_09880 PF13482 RNase_H superfamily LK685_09890 PF11122 Inner spore coat protein D LK685_09895 PF06908 YspA SLOG family LK685_09900 PF05103 DivIVA protein LK685_09910 PF01170 Putative RNA methylase family UPF0020 LK685_09910 PF02926 THUMP domain LK685_09920 PF14139 YpzG-like protein LK685_09930 PF13307 Helicase C-terminal domain LK685_09940 PF04962 KduI/IolB family LK685_09945 PF00356 Bacterial regulatory proteins, lacI family LK685_09950 PF00294 pfkB family carbohydrate kinase LK685_09955 PF01081 KDPG and KHG aldolase LK685_09960 PF03812 2-keto-3-deoxygluconate permease LK685_09965 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LK685_09970 PF00156 Phosphoribosyl transferase domain LK685_09975 PF00860 Permease family LK685_09980 PF02797 Chalcone and stilbene synthases, C-terminal domain LK685_09980 PF00195 Chalcone and stilbene synthases, N-terminal domain LK685_09985 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LK685_09995 PF00350 Dynamin family LK685_10000 PF10752 Protein of unknown function (DUF2533) LK685_10010 PF01367 5'-3' exonuclease, C-terminal SAM fold LK685_10010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LK685_10020 PF13456 Reverse transcriptase-like LK685_10025 PF02592 Putative vitamin uptake transporter LK685_10030 PF13456 Reverse transcriptase-like LK685_10035 PF10782 Zinc-finger LK685_10040 PF10819 Protein of unknown function (DUF2564) LK685_10050 PF00313 'Cold-shock' DNA-binding domain LK685_10060 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LK685_10060 PF00534 Glycosyl transferases group 1 LK685_10065 PF04204 Homoserine O-succinyltransferase LK685_10070 PF00255 Glutathione peroxidase LK685_10080 PF08712 Scaffold protein Nfu/NifU N terminal LK685_10080 PF13769 Virulence factor LK685_10085 PF00920 Dehydratase family LK685_10090 PF06491 Disulphide isomerase LK685_10095 PF04445 Putative SAM-dependent methyltransferase LK685_10100 PF14005 YpjP-like protein LK685_10105 PF04608 Phosphatidylglycerophosphatase A LK685_10110 PF00303 Thymidylate synthase LK685_10115 PF00186 Dihydrofolate reductase LK685_10125 PF03006 Haemolysin-III related LK685_10130 PF00158 Sigma-54 interaction domain LK685_10130 PF08461 Ribonuclease R winged-helix domain LK685_10135 PF00585 C-terminal regulatory domain of Threonine dehydratase LK685_10135 PF00291 Pyridoxal-phosphate dependent enzyme LK685_10140 PF10751 Protein of unknown function (DUF2535) LK685_10145 PF02630 SCO1/SenC LK685_10150 PF13472 GDSL-like Lipase/Acylhydrolase family LK685_10155 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) LK685_10160 PF17431 Uncharacterized YmpT-like LK685_10165 PF01554 MatE LK685_10170 PF01047 MarR family LK685_10175 PF01625 Peptide methionine sulfoxide reductase LK685_10180 PF01641 SelR domain LK685_10185 PF02719 Polysaccharide biosynthesis protein LK685_10190 PF02333 Phytase LK685_10195 PF12996 DUF based on E. rectale Gene description (DUF3880) LK685_10210 PF00535 Glycosyl transferase family 2 LK685_10215 PF00583 Acetyltransferase (GNAT) family LK685_10230 PF00202 Aminotransferase class-III LK685_10235 PF01144 Coenzyme A transferase LK685_10240 PF01144 Coenzyme A transferase LK685_10245 PF07687 Peptidase dimerisation domain LK685_10245 PF01546 Peptidase family M20/M25/M40 LK685_10250 PF00583 Acetyltransferase (GNAT) family LK685_10255 PF12544 Lysine-2,3-aminomutase LK685_10260 PF14122 YokU-like protein, putative antitoxin LK685_10265 PF06855 YozE SAM-like fold LK685_10280 PF14162 YozD-like protein LK685_10285 PF01569 PAP2 superfamily LK685_10290 PF14191 YodL-like LK685_10300 PF01048 Phosphorylase superfamily LK685_10305 PF02557 D-alanyl-D-alanine carboxypeptidase LK685_10315 PF08241 Methyltransferase domain LK685_10320 PF01471 Putative peptidoglycan binding domain LK685_10320 PF03572 Peptidase family S41 LK685_10320 PF17820 PDZ domain LK685_10325 PF00474 Sodium:solute symporter family LK685_10330 PF11755 Protein of unknown function (DUF3311) LK685_10335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_10340 PF01738 Dienelactone hydrolase family LK685_10345 PF00881 Nitroreductase family LK685_10350 PF01638 HxlR-like helix-turn-helix LK685_10355 PF14552 Tautomerase enzyme LK685_10360 PF02447 GntP family permease LK685_10375 PF00892 EamA-like transporter family LK685_10385 PF08830 Protein of unknown function (DUF1806) LK685_10390 PF02585 GlcNAc-PI de-N-acetylase LK685_10395 PF01740 STAS domain LK685_10400 PF01554 MatE LK685_10405 PF10372 Bacterial membrane-spanning protein N-terminus LK685_10405 PF02457 DisA bacterial checkpoint controller nucleotide-binding LK685_10410 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LK685_10415 PF01476 LysM domain LK685_10415 PF00877 NlpC/P60 family LK685_10420 PF00080 Copper/zinc superoxide dismutase (SODC) LK685_10420 PF13627 Prokaryotic lipoprotein-attachment site LK685_10425 PF07728 AAA domain (dynein-related subfamily) LK685_10430 PF00092 von Willebrand factor type A domain LK685_10435 PF00676 Dehydrogenase E1 component LK685_10435 PF16870 2-oxoglutarate dehydrogenase C-terminal LK685_10435 PF02779 Transketolase, pyrimidine binding domain LK685_10440 PF02817 e3 binding domain LK685_10440 PF00364 Biotin-requiring enzyme LK685_10440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK685_10445 PF01758 Sodium Bile acid symporter family LK685_10450 PF00209 Sodium:neurotransmitter symporter family LK685_10455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LK685_10455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LK685_10460 PF13243 Squalene-hopene cyclase C-terminal domain LK685_10460 PF13249 Squalene-hopene cyclase N-terminal domain LK685_10465 PF00171 Aldehyde dehydrogenase family LK685_10475 PF08000 Bacterial PH domain LK685_10490 PF00011 Hsp20/alpha crystallin family LK685_10505 PF01258 Prokaryotic dksA/traR C4-type zinc finger LK685_10510 PF02525 Flavodoxin-like fold LK685_10520 PF09382 RQC domain LK685_10520 PF00570 HRDC domain LK685_10520 PF00270 DEAD/DEAH box helicase LK685_10520 PF16124 RecQ zinc-binding LK685_10520 PF00271 Helicase conserved C-terminal domain LK685_10525 PF01476 LysM domain LK685_10525 PF06725 3D domain LK685_10530 PF00072 Response regulator receiver domain LK685_10530 PF00196 Bacterial regulatory proteins, luxR family LK685_10535 PF07730 Histidine kinase LK685_10540 PF00487 Fatty acid desaturase LK685_10545 PF02016 LD-carboxypeptidase N-terminal domain LK685_10545 PF17676 LD-carboxypeptidase C-terminal domain LK685_10555 PF18846 Bacterial archaeo-eukaryotic release factor family 5 LK685_10560 PF04238 Protein of unknown function (DUF420) LK685_10570 PF01022 Bacterial regulatory protein, arsR family LK685_10580 PF08279 HTH domain LK685_10580 PF13280 WYL domain LK685_10585 PF06445 GyrI-like small molecule binding domain LK685_10590 PF00753 Metallo-beta-lactamase superfamily LK685_10595 PF13305 Tetracyclin repressor-like, C-terminal domain LK685_10595 PF00440 Bacterial regulatory proteins, tetR family LK685_10600 PF00583 Acetyltransferase (GNAT) family LK685_10605 PF12833 Helix-turn-helix domain LK685_10605 PF07883 Cupin domain LK685_10610 PF01588 Putative tRNA binding domain LK685_10615 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LK685_10615 PF12708 Pectate lyase superfamily protein LK685_10620 PF01593 Flavin containing amine oxidoreductase LK685_10625 PF09346 SMI1 / KNR4 family (SUKH-1) LK685_10630 PF04740 LXG domain of WXG superfamily LK685_10630 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LK685_10655 PF07693 KAP family P-loop domain LK685_10665 PF08863 YolD-like protein LK685_10680 PF18801 response regulator aspartate phosphatase H, N terminal LK685_10720 PF02586 SOS response associated peptidase (SRAP) LK685_10740 PF01381 Helix-turn-helix LK685_10745 PF05154 TM2 domain LK685_10750 PF00457 Glycosyl hydrolases family 11 LK685_10755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LK685_10755 PF00391 PEP-utilising enzyme, mobile domain LK685_10765 PF11518 Protein of unknown function (DUF3221) LK685_10775 PF01965 DJ-1/PfpI family LK685_10785 PF00892 EamA-like transporter family LK685_10790 PF03466 LysR substrate binding domain LK685_10790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_10795 PF05675 Protein of unknown function (DUF817) LK685_10800 PF13443 Cro/C1-type HTH DNA-binding domain LK685_10805 PF11188 Protein of unknown function (DUF2975) LK685_10810 PF04294 VanW like protein LK685_10830 PF14268 YoaP-like LK685_10830 PF00583 Acetyltransferase (GNAT) family LK685_10840 PF16302 Domain of unknown function (DUF4944) LK685_10845 PF00190 Cupin LK685_10855 PF02586 SOS response associated peptidase (SRAP) LK685_10860 PF00544 Pectate lyase LK685_10865 PF06912 Protein of unknown function (DUF1275) LK685_10870 PF03330 Lytic transglycolase LK685_10875 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LK685_10875 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LK685_10880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_10880 PF00672 HAMP domain LK685_10880 PF05227 CHASE3 domain LK685_10885 PF13217 Protein of unknown function (DUF4025) LK685_10900 PF17094 Uncharacterised protein family (UPF0715) LK685_10910 PF01568 Molydopterin dinucleotide binding domain LK685_10910 PF00384 Molybdopterin oxidoreductase LK685_10910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK685_10915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK685_10915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK685_10920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK685_10920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK685_10925 PF07690 Major Facilitator Superfamily LK685_10930 PF13302 Acetyltransferase (GNAT) domain LK685_10940 PF06103 Bacterial protein of unknown function (DUF948) LK685_10945 PF00106 short chain dehydrogenase LK685_10950 PF02334 Replication terminator protein LK685_10955 PF14748 Pyrroline-5-carboxylate reductase dimerisation LK685_10955 PF03807 NADP oxidoreductase coenzyme F420-dependent LK685_10960 PF01472 PUA domain LK685_10960 PF00696 Amino acid kinase family LK685_10965 PF03466 LysR substrate binding domain LK685_10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_10970 PF04898 Glutamate synthase central domain LK685_10970 PF01493 GXGXG motif LK685_10970 PF01645 Conserved region in glutamate synthase LK685_10970 PF00310 Glutamine amidotransferases class-II LK685_10975 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_10975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LK685_10980 PF00107 Zinc-binding dehydrogenase LK685_10980 PF08240 Alcohol dehydrogenase GroES-like domain LK685_10985 PF03466 LysR substrate binding domain LK685_10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_10995 PF12728 Helix-turn-helix domain LK685_11000 PF00589 Phage integrase family LK685_11010 PF16800 IseA DL-endopeptidase inhibitor LK685_11015 PF01554 MatE LK685_11020 PF01263 Aldose 1-epimerase LK685_11025 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LK685_11030 PF00550 Phosphopantetheine attachment site LK685_11030 PF13193 AMP-binding enzyme C-terminal domain LK685_11030 PF00501 AMP-binding enzyme LK685_11030 PF00668 Condensation domain LK685_11035 PF00501 AMP-binding enzyme LK685_11035 PF00668 Condensation domain LK685_11035 PF00550 Phosphopantetheine attachment site LK685_11035 PF13193 AMP-binding enzyme C-terminal domain LK685_11040 PF00501 AMP-binding enzyme LK685_11040 PF13193 AMP-binding enzyme C-terminal domain LK685_11040 PF00668 Condensation domain LK685_11040 PF00550 Phosphopantetheine attachment site LK685_11045 PF13193 AMP-binding enzyme C-terminal domain LK685_11045 PF00668 Condensation domain LK685_11045 PF00550 Phosphopantetheine attachment site LK685_11045 PF00501 AMP-binding enzyme LK685_11050 PF00501 AMP-binding enzyme LK685_11050 PF00975 Thioesterase domain LK685_11050 PF00550 Phosphopantetheine attachment site LK685_11050 PF00668 Condensation domain LK685_11050 PF13193 AMP-binding enzyme C-terminal domain LK685_11055 PF07098 Protein of unknown function (DUF1360) LK685_11060 PF02638 Glycosyl hydrolase-like 10 LK685_11070 PF17329 Family of unknown function (DUF5367) LK685_11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK685_11075 PF02770 Acyl-CoA dehydrogenase, middle domain LK685_11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK685_11080 PF00501 AMP-binding enzyme LK685_11080 PF13193 AMP-binding enzyme C-terminal domain LK685_11085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK685_11085 PF00289 Biotin carboxylase, N-terminal domain LK685_11085 PF02785 Biotin carboxylase C-terminal domain LK685_11090 PF00364 Biotin-requiring enzyme LK685_11095 PF00682 HMGL-like LK685_11100 PF00378 Enoyl-CoA hydratase/isomerase LK685_11105 PF01039 Carboxyl transferase domain LK685_11115 PF09335 SNARE associated Golgi protein LK685_11120 PF00483 Nucleotidyl transferase LK685_11125 PF04138 GtrA-like protein LK685_11130 PF03422 Carbohydrate binding module (family 6) LK685_11130 PF04616 Glycosyl hydrolases family 43 LK685_11135 PF17189 Glycosyl hydrolase family 30 beta sandwich domain LK685_11140 PF17452 Uncharacterized YnfE-like LK685_11145 PF00150 Cellulase (glycosyl hydrolase family 5) LK685_11145 PF00942 Cellulose binding domain LK685_11150 PF01235 Sodium:alanine symporter family LK685_11160 PF00521 DNA gyrase/topoisomerase IV, subunit A LK685_11160 PF03989 DNA gyrase C-terminal domain, beta-propeller LK685_11165 PF01751 Toprim domain LK685_11165 PF00986 DNA gyrase B subunit, carboxyl terminus LK685_11165 PF00204 DNA gyrase B LK685_11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_11170 PF13380 CoA binding domain LK685_11175 PF02660 Glycerol-3-phosphate acyltransferase LK685_11180 PF01521 Iron-sulphur cluster biosynthesis LK685_11190 PF03061 Thioesterase superfamily LK685_11200 PF08177 Small acid-soluble spore protein N family LK685_11205 PF13040 Fur-regulated basic protein B LK685_11210 PF00578 AhpC/TSA family LK685_11215 PF00694 Aconitase C-terminal domain LK685_11215 PF00330 Aconitase family (aconitate hydratase) LK685_11225 PF08179 Small acid-soluble spore protein P family LK685_11235 PF11084 Protein of unknown function (DUF2621) LK685_11240 PF07301 Protein of unknown function (DUF1453) LK685_11245 PF00072 Response regulator receiver domain LK685_11250 PF02683 Cytochrome C biogenesis protein transmembrane region LK685_11255 PF09388 Spo0E like sporulation regulatory protein LK685_11260 PF03672 Uncharacterised protein family (UPF0154) LK685_11265 PF10747 Sporulation inhibitor of replication protein SirA LK685_11270 PF00456 Transketolase, thiamine diphosphate binding domain LK685_11270 PF02780 Transketolase, C-terminal domain LK685_11270 PF02779 Transketolase, pyrimidine binding domain LK685_11275 PF05979 Bacterial protein of unknown function (DUF896) LK685_11280 PF00239 Resolvase, N terminal domain LK685_11285 PF01476 LysM domain LK685_11290 PF00717 Peptidase S24-like LK685_11290 PF01726 LexA DNA binding domain LK685_11300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_11305 PF10710 Protein of unknown function (DUF2512) LK685_11310 PF05908 Poly-gamma-glutamate hydrolase LK685_11320 PF14158 YndJ-like protein LK685_11325 PF13761 Domain of unknown function (DUF4166) LK685_11335 PF05504 Spore germination B3/ GerAC like, C-terminal LK685_11340 PF03845 Spore germination protein LK685_11345 PF03323 Bacillus/Clostridium GerA spore germination protein LK685_11370 PF02416 mttA/Hcf106 family LK685_11380 PF14037 YoqO-like protein LK685_11385 PF15493 Domain of unknown function, YrpD LK685_11395 PF00303 Thymidylate synthase LK685_11410 PF00692 dUTPase LK685_11415 PF10903 Protein of unknown function (DUF2691) LK685_11420 PF01168 Alanine racemase, N-terminal domain LK685_11420 PF00842 Alanine racemase, C-terminal domain LK685_11425 PF00083 Sugar (and other) transporter LK685_11430 PF00565 Staphylococcal nuclease homologue LK685_11440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK685_11440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK685_11445 PF01261 Xylose isomerase-like TIM barrel LK685_11450 PF00480 ROK family LK685_11455 PF04616 Glycosyl hydrolases family 43 LK685_11455 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LK685_11485 PF13021 Domain of unknown function (DUF3885) LK685_11490 PF13443 Cro/C1-type HTH DNA-binding domain LK685_11505 PF13302 Acetyltransferase (GNAT) domain LK685_11540 PF03951 Glutamine synthetase, beta-Grasp domain LK685_11540 PF00120 Glutamine synthetase, catalytic domain LK685_11545 PF13411 MerR HTH family regulatory protein LK685_11550 PF06838 Methionine gamma-lyase LK685_11555 PF01926 50S ribosome-binding GTPase LK685_11555 PF16360 GTP-binding GTPase Middle Region LK685_11555 PF13167 GTP-binding GTPase N-terminal LK685_11610 PF00149 Calcineurin-like phosphoesterase LK685_11615 PF00269 Small, acid-soluble spore proteins, alpha/beta type LK685_11650 PF00303 Thymidylate synthase LK685_11675 PF00692 dUTPase LK685_11695 PF00085 Thioredoxin LK685_11700 PF00268 Ribonucleotide reductase, small chain LK685_11720 PF07972 NrdI Flavodoxin like LK685_11775 PF00145 C-5 cytosine-specific DNA methylase LK685_11790 PF02223 Thymidylate kinase LK685_11800 PF09629 YorP protein LK685_11805 PF06725 3D domain LK685_11810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LK685_11810 PF07733 Bacterial DNA polymerase III alpha NTPase domain LK685_11810 PF02811 PHP domain LK685_11810 PF14579 Helix-hairpin-helix motif LK685_11815 PF01368 DHH family LK685_11815 PF17768 RecJ OB domain LK685_11825 PF03796 DnaB-like helicase C terminal domain LK685_11855 PF09636 XkdW protein LK685_11890 PF02586 SOS response associated peptidase (SRAP) LK685_11895 PF01068 ATP dependent DNA ligase domain LK685_11915 PF14037 YoqO-like protein LK685_11950 PF09643 YopX protein LK685_11975 PF13443 Cro/C1-type HTH DNA-binding domain LK685_11985 PF14072 DNA-sulfur modification-associated LK685_12065 PF17094 Uncharacterised protein family (UPF0715) LK685_12080 PF13021 Domain of unknown function (DUF3885) LK685_12095 PF17094 Uncharacterised protein family (UPF0715) LK685_12165 PF00216 Bacterial DNA-binding protein LK685_12175 PF09642 YonK protein LK685_12195 PF03237 Terminase-like family LK685_12285 PF03009 Glycerophosphoryl diester phosphodiesterase family LK685_12300 PF00589 Phage integrase family LK685_12300 PF13495 Phage integrase, N-terminal SAM-like domain LK685_12325 PF10145 Phage-related minor tail protein LK685_12325 PF01551 Peptidase family M23 LK685_12325 PF01464 Transglycosylase SLT domain LK685_12330 PF05709 Phage tail protein LK685_12335 PF06605 Prophage endopeptidase tail LK685_12345 PF12708 Pectate lyase superfamily protein LK685_12345 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain LK685_12350 PF01510 N-acetylmuramoyl-L-alanine amidase LK685_12365 PF18801 response regulator aspartate phosphatase H, N terminal LK685_12375 PF11798 IMS family HHH motif LK685_12375 PF00817 impB/mucB/samB family LK685_12375 PF11799 impB/mucB/samB family C-terminal domain LK685_12380 PF08863 YolD-like protein LK685_12395 PF16219 Domain of unknown function (DUF4879) LK685_12405 PF13302 Acetyltransferase (GNAT) domain LK685_12415 PF09346 SMI1 / KNR4 family (SUKH-1) LK685_12420 PF15652 HNH/Endo VII superfamily toxin with a SHH signature LK685_12420 PF04740 LXG domain of WXG superfamily LK685_12425 PF09346 SMI1 / KNR4 family (SUKH-1) LK685_12435 PF05901 Excalibur calcium-binding domain LK685_12435 PF00565 Staphylococcal nuclease homologue LK685_12455 PF01520 N-acetylmuramoyl-L-alanine amidase LK685_12455 PF05036 Sporulation related domain LK685_12465 PF00268 Ribonucleotide reductase, small chain LK685_12470 PF00317 Ribonucleotide reductase, all-alpha domain LK685_12470 PF08343 Ribonucleotide reductase N-terminal LK685_12470 PF02867 Ribonucleotide reductase, barrel domain LK685_12475 PF07972 NrdI Flavodoxin like LK685_12485 PF14157 YmzC-like protein LK685_12490 PF17209 Hfq protein LK685_12500 PF12788 YmaF family LK685_12510 PF00893 Small Multidrug Resistance protein LK685_12515 PF00893 Small Multidrug Resistance protein LK685_12520 PF02566 OsmC-like protein LK685_12525 PF05908 Poly-gamma-glutamate hydrolase LK685_12535 PF00082 Subtilase family LK685_12550 PF00067 Cytochrome P450 LK685_12555 PF16197 Ketoacyl-synthetase C-terminal extension LK685_12555 PF00975 Thioesterase domain LK685_12555 PF14765 Polyketide synthase dehydratase LK685_12555 PF00550 Phosphopantetheine attachment site LK685_12555 PF08242 Methyltransferase domain LK685_12555 PF00109 Beta-ketoacyl synthase, N-terminal domain LK685_12555 PF02801 Beta-ketoacyl synthase, C-terminal domain LK685_12560 PF13193 AMP-binding enzyme C-terminal domain LK685_12560 PF00501 AMP-binding enzyme LK685_12560 PF00550 Phosphopantetheine attachment site LK685_12560 PF02801 Beta-ketoacyl synthase, C-terminal domain LK685_12560 PF00668 Condensation domain LK685_12560 PF08659 KR domain LK685_12560 PF14765 Polyketide synthase dehydratase LK685_12560 PF00109 Beta-ketoacyl synthase, N-terminal domain LK685_12560 PF16197 Ketoacyl-synthetase C-terminal extension LK685_12565 PF14765 Polyketide synthase dehydratase LK685_12565 PF00550 Phosphopantetheine attachment site LK685_12565 PF08242 Methyltransferase domain LK685_12565 PF08659 KR domain LK685_12565 PF02801 Beta-ketoacyl synthase, C-terminal domain LK685_12565 PF00109 Beta-ketoacyl synthase, N-terminal domain LK685_12565 PF16197 Ketoacyl-synthetase C-terminal extension LK685_12570 PF16197 Ketoacyl-synthetase C-terminal extension LK685_12570 PF14765 Polyketide synthase dehydratase LK685_12570 PF00550 Phosphopantetheine attachment site LK685_12570 PF08659 KR domain LK685_12570 PF02801 Beta-ketoacyl synthase, C-terminal domain LK685_12570 PF00109 Beta-ketoacyl synthase, N-terminal domain LK685_12575 PF00109 Beta-ketoacyl synthase, N-terminal domain LK685_12575 PF16197 Ketoacyl-synthetase C-terminal extension LK685_12575 PF00668 Condensation domain LK685_12575 PF13193 AMP-binding enzyme C-terminal domain LK685_12575 PF02801 Beta-ketoacyl synthase, C-terminal domain LK685_12575 PF00501 AMP-binding enzyme LK685_12575 PF14765 Polyketide synthase dehydratase LK685_12575 PF00550 Phosphopantetheine attachment site LK685_12575 PF08659 KR domain LK685_12580 PF00378 Enoyl-CoA hydratase/isomerase LK685_12585 PF00378 Enoyl-CoA hydratase/isomerase LK685_12590 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LK685_12590 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LK685_12595 PF00109 Beta-ketoacyl synthase, N-terminal domain LK685_12595 PF02801 Beta-ketoacyl synthase, C-terminal domain LK685_12600 PF00550 Phosphopantetheine attachment site LK685_12605 PF03060 Nitronate monooxygenase LK685_12605 PF00698 Acyl transferase domain LK685_12610 PF00698 Acyl transferase domain LK685_12615 PF00698 Acyl transferase domain LK685_12625 PF00753 Metallo-beta-lactamase superfamily LK685_12630 PF13977 BetI-type transcriptional repressor, C-terminal LK685_12630 PF00440 Bacterial regulatory proteins, tetR family LK685_12640 PF14184 Regulatory protein YrvL LK685_12645 PF01119 DNA mismatch repair protein, C-terminal domain LK685_12645 PF08676 MutL C terminal dimerisation domain LK685_12650 PF01624 MutS domain I LK685_12650 PF05192 MutS domain III LK685_12650 PF05190 MutS family domain IV LK685_12650 PF00488 MutS domain V LK685_12650 PF05188 MutS domain II LK685_12655 PF10628 Outer spore coat protein E (CotE) LK685_12660 PF06133 Control of competence regulator ComK, YlbF/YmcA LK685_12665 PF00919 Uncharacterized protein family UPF0004 LK685_12665 PF01938 TRAM domain LK685_12665 PF04055 Radical SAM superfamily LK685_12670 PF00155 Aminotransferase class I and II LK685_12675 PF00107 Zinc-binding dehydrogenase LK685_12675 PF08240 Alcohol dehydrogenase GroES-like domain LK685_12680 PF04232 Stage V sporulation protein S (SpoVS) LK685_12685 PF13277 YmdB-like protein LK685_12690 PF12072 Domain of unknown function (DUF3552) LK685_12690 PF00013 KH domain LK685_12690 PF01966 HD domain LK685_12695 PF00144 Beta-lactamase LK685_12700 PF00154 recA bacterial DNA recombination protein LK685_12705 PF02464 Competence-damaged protein LK685_12705 PF00994 Probable molybdopterin binding domain LK685_12705 PF18146 Damage-inducible protein CinA KH domain LK685_12710 PF01066 CDP-alcohol phosphatidyltransferase LK685_12715 PF13464 Domain of unknown function (DUF4115) LK685_12720 PF11868 Protein of unknown function (DUF3388) LK685_12725 PF11588 Protein of unknown function (DUF3243) LK685_12735 PF00675 Insulinase (Peptidase family M16) LK685_12735 PF05193 Peptidase M16 inactive domain LK685_12740 PF05193 Peptidase M16 inactive domain LK685_12745 PF07690 Major Facilitator Superfamily LK685_12750 PF00392 Bacterial regulatory proteins, gntR family LK685_12750 PF07702 UTRA domain LK685_12755 PF17854 FtsK alpha domain LK685_12755 PF01580 FtsK/SpoIIIE family LK685_12755 PF09397 Ftsk gamma domain LK685_12760 PF14035 YlzJ-like protein LK685_12765 PF00574 Clp protease LK685_12770 PF17770 Ribonuclease J C-terminal domain LK685_12770 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LK685_12770 PF00753 Metallo-beta-lactamase superfamily LK685_12775 PF00701 Dihydrodipicolinate synthetase family LK685_12780 PF13840 ACT domain LK685_12780 PF00696 Amino acid kinase family LK685_12785 PF02774 Semialdehyde dehydrogenase, dimerisation domain LK685_12785 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK685_12790 PF02441 Flavoprotein LK685_12795 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LK685_12795 PF16924 Dipicolinate synthase subunit A N-terminal domain LK685_12800 PF05239 PRC-barrel domain LK685_12805 PF05193 Peptidase M16 inactive domain LK685_12805 PF00675 Insulinase (Peptidase family M16) LK685_12810 PF01522 Polysaccharide deacetylase LK685_12815 PF03725 3' exoribonuclease family, domain 2 LK685_12815 PF01138 3' exoribonuclease family, domain 1 LK685_12815 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LK685_12815 PF00013 KH domain LK685_12815 PF00575 S1 RNA binding domain LK685_12820 PF00312 Ribosomal protein S15 LK685_12825 PF01687 Riboflavin kinase LK685_12825 PF06574 FAD synthetase LK685_12830 PF01509 TruB family pseudouridylate synthase (N terminal domain) LK685_12830 PF16198 tRNA pseudouridylate synthase B C-terminal domain LK685_12835 PF02033 Ribosome-binding factor A LK685_12840 PF04456 Protein of unknown function (DUF503) LK685_12845 PF00009 Elongation factor Tu GTP binding domain LK685_12845 PF11987 Translation-initiation factor 2 LK685_12845 PF04760 Translation initiation factor IF-2, N-terminal region LK685_12850 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LK685_12855 PF04296 Protein of unknown function (DUF448) LK685_12860 PF08529 NusA N-terminal domain LK685_12860 PF00575 S1 RNA binding domain LK685_12860 PF13184 NusA-like KH domain LK685_12865 PF02576 RimP N-terminal domain LK685_12865 PF17384 RimP C-terminal SH3 domain LK685_12870 PF14480 DNA polymerase III polC-type N-terminus I LK685_12870 PF11490 DNA polymerase III polC-type N-terminus II LK685_12870 PF07733 Bacterial DNA polymerase III alpha NTPase domain LK685_12870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LK685_12870 PF02811 PHP domain LK685_12870 PF00929 Exonuclease LK685_12870 PF14579 Helix-hairpin-helix motif LK685_12875 PF03129 Anticodon binding domain LK685_12875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK685_12875 PF04073 Aminoacyl-tRNA editing domain LK685_12880 PF02163 Peptidase family M50 LK685_12880 PF17820 PDZ domain LK685_12885 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LK685_12885 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LK685_12885 PF13288 DXP reductoisomerase C-terminal domain LK685_12895 PF01255 Putative undecaprenyl diphosphate synthase LK685_12900 PF01765 Ribosome recycling factor LK685_12905 PF00696 Amino acid kinase family LK685_12910 PF00889 Elongation factor TS LK685_12915 PF00318 Ribosomal protein S2 LK685_12925 PF04539 Sigma-70 region 3 LK685_12925 PF04545 Sigma-70, region 4 LK685_12925 PF04542 Sigma-70 region 2 LK685_12930 PF03975 CheD chemotactic sensory transduction LK685_12935 PF04509 CheC-like family LK685_12940 PF01584 CheW-like domain LK685_12945 PF07194 P2 response regulator binding domain LK685_12945 PF01627 Hpt domain LK685_12945 PF02895 Signal transducing histidine kinase, homodimeric domain LK685_12945 PF01584 CheW-like domain LK685_12945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_12950 PF00072 Response regulator receiver domain LK685_12950 PF01339 CheB methylesterase LK685_12955 PF10609 NUBPL iron-transfer P-loop NTPase LK685_12960 PF00448 SRP54-type protein, GTPase domain LK685_12965 PF00771 FHIPEP family LK685_12970 PF01312 FlhB HrpN YscU SpaS Family LK685_12975 PF01311 Bacterial export proteins, family 1 LK685_12980 PF01313 Bacterial export proteins, family 3 LK685_12985 PF00813 FliP family LK685_12990 PF04347 Flagellar biosynthesis protein, FliO LK685_12995 PF00072 Response regulator receiver domain LK685_13000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LK685_13000 PF04509 CheC-like family LK685_13005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LK685_13005 PF02154 Flagellar motor switch protein FliM LK685_13010 PF03748 Flagellar basal body-associated protein FliL LK685_13015 PF06289 Flagellar and Swarming motility proteins LK685_13020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK685_13020 PF00460 Flagella basal body rod protein LK685_13025 PF03963 Flagellar hook capping protein - N-terminal region LK685_13030 PF02120 Flagellar hook-length control protein FliK LK685_13035 PF03448 MgtE intracellular N domain LK685_13040 PF02050 Flagellar FliJ protein LK685_13045 PF18269 T3SS EscN ATPase C-terminal domain LK685_13045 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK685_13045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK685_13050 PF02108 Flagellar assembly protein FliH LK685_13055 PF14842 FliG N-terminal domain LK685_13055 PF14841 FliG middle domain LK685_13055 PF01706 FliG C-terminal domain LK685_13060 PF08345 Flagellar M-ring protein C-terminal LK685_13060 PF01514 Secretory protein of YscJ/FliF family LK685_13065 PF02049 Flagellar hook-basal body complex protein FliE LK685_13070 PF00460 Flagella basal body rod protein LK685_13070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK685_13075 PF00460 Flagella basal body rod protein LK685_13080 PF06018 CodY GAF-like domain LK685_13080 PF08222 CodY helix-turn-helix domain LK685_13085 PF00004 ATPase family associated with various cellular activities (AAA) LK685_13085 PF07724 AAA domain (Cdc48 subfamily) LK685_13085 PF10431 C-terminal, D2-small domain, of ClpB protein LK685_13090 PF00227 Proteasome subunit LK685_13095 PF02899 Phage integrase, N-terminal SAM-like domain LK685_13095 PF00589 Phage integrase family LK685_13100 PF01134 Glucose inhibited division protein A LK685_13105 PF01751 Toprim domain LK685_13105 PF01396 Topoisomerase DNA binding C4 zinc finger LK685_13105 PF01131 DNA topoisomerase LK685_13110 PF02481 DNA recombination-mediator protein A LK685_13115 PF00549 CoA-ligase LK685_13115 PF02629 CoA binding domain LK685_13120 PF08442 ATP-grasp domain LK685_13120 PF00549 CoA-ligase LK685_13125 PF01312 FlhB HrpN YscU SpaS Family LK685_13135 PF01351 Ribonuclease HII LK685_13140 PF01926 50S ribosome-binding GTPase LK685_13145 PF01245 Ribosomal protein L19 LK685_13150 PF01746 tRNA (Guanine-1)-methyltransferase LK685_13155 PF01782 RimM N-terminal domain LK685_13155 PF05239 PRC-barrel domain LK685_13160 PF11068 YlqD protein LK685_13170 PF00886 Ribosomal protein S16 LK685_13175 PF00448 SRP54-type protein, GTPase domain LK685_13175 PF02881 SRP54-type protein, helical bundle domain LK685_13175 PF02978 Signal peptide binding domain LK685_13180 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LK685_13185 PF02369 Bacterial Ig-like domain (group 1) LK685_13190 PF02881 SRP54-type protein, helical bundle domain LK685_13190 PF00448 SRP54-type protein, GTPase domain LK685_13195 PF02463 RecF/RecN/SMC N terminal domain LK685_13195 PF06470 SMC proteins Flexible Hinge Domain LK685_13200 PF14622 Ribonuclease-III-like LK685_13200 PF00035 Double-stranded RNA binding motif LK685_13205 PF00550 Phosphopantetheine attachment site LK685_13215 PF00698 Acyl transferase domain LK685_13220 PF02504 Fatty acid synthesis protein LK685_13225 PF03061 Thioesterase superfamily LK685_13230 PF00271 Helicase conserved C-terminal domain LK685_13230 PF17191 RecG wedge domain LK685_13230 PF00270 DEAD/DEAH box helicase LK685_13235 PF03313 Serine dehydratase alpha chain LK685_13240 PF01842 ACT domain LK685_13240 PF03315 Serine dehydratase beta chain LK685_13245 PF02734 DAK2 domain LK685_13245 PF13684 Dihydroxyacetone kinase family LK685_13250 PF03780 Asp23 family, cell envelope-related function LK685_13255 PF00830 Ribosomal L28 family LK685_13260 PF08183 Stage V sporulation protein family LK685_13265 PF04263 Thiamin pyrophosphokinase, catalytic domain LK685_13265 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LK685_13270 PF00834 Ribulose-phosphate 3 epimerase family LK685_13275 PF03193 RsgA GTPase LK685_13275 PF16745 RsgA N-terminal domain LK685_13280 PF00069 Protein kinase domain LK685_13280 PF03793 PASTA domain LK685_13290 PF04055 Radical SAM superfamily LK685_13295 PF01189 16S rRNA methyltransferase RsmB/F LK685_13295 PF01029 NusB family LK685_13300 PF02911 Formyl transferase, C-terminal domain LK685_13300 PF00551 Formyl transferase LK685_13305 PF01327 Polypeptide deformylase LK685_13310 PF04851 Type III restriction enzyme, res subunit LK685_13310 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LK685_13310 PF18074 Primosomal protein N C-terminal domain LK685_13310 PF17764 3′ DNA-binding domain (3′BD) LK685_13310 PF00271 Helicase conserved C-terminal domain LK685_13315 PF02441 Flavoprotein LK685_13315 PF04127 DNA / pantothenate metabolism flavoprotein LK685_13320 PF01192 RNA polymerase Rpb6 LK685_13325 PF00625 Guanylate kinase LK685_13330 PF04025 Domain of unknown function (DUF370) LK685_13335 PF08340 Domain of unknown function (DUF1732) LK685_13335 PF03755 YicC-like family, N-terminal region LK685_13340 PF00690 Cation transporter/ATPase, N-terminus LK685_13340 PF00689 Cation transporting ATPase, C-terminus LK685_13345 PF05670 NFACT protein RNA binding domain LK685_13355 PF01903 CbiX LK685_13360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK685_13370 PF14306 PUA-like domain LK685_13370 PF01747 ATP-sulfurylase LK685_13375 PF01384 Phosphate transporter family LK685_13380 PF01507 Phosphoadenosine phosphosulfate reductase family LK685_13385 PF00156 Phosphoribosyl transferase domain LK685_13390 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LK685_13395 PF01180 Dihydroorotate dehydrogenase LK685_13400 PF00175 Oxidoreductase NAD-binding domain LK685_13400 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LK685_13405 PF02142 MGS-like domain LK685_13405 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LK685_13405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK685_13410 PF00117 Glutamine amidotransferase class-I LK685_13410 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LK685_13415 PF01979 Amidohydrolase family LK685_13420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LK685_13420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LK685_13425 PF00860 Permease family LK685_13430 PF00156 Phosphoribosyl transferase domain LK685_13435 PF01479 S4 domain LK685_13435 PF00849 RNA pseudouridylate synthase LK685_13440 PF01252 Signal peptidase (SPase) II LK685_13445 PF01258 Prokaryotic dksA/traR C4-type zinc finger LK685_13450 PF00133 tRNA synthetases class I (I, L, M and V) LK685_13450 PF08264 Anticodon-binding domain of tRNA LK685_13455 PF05103 DivIVA protein LK685_13460 PF17774 Putative RNA-binding domain in YlmH LK685_13460 PF01479 S4 domain LK685_13465 PF02325 YGGT family LK685_13470 PF04472 Cell division protein SepF LK685_13475 PF01168 Alanine racemase, N-terminal domain LK685_13480 PF02578 Multi-copper polyphenol oxidoreductase laccase LK685_13485 PF05239 PRC-barrel domain LK685_13490 PF01546 Peptidase family M20/M25/M40 LK685_13490 PF07687 Peptidase dimerisation domain LK685_13495 PF00005 ABC transporter LK685_13500 PF04545 Sigma-70, region 4 LK685_13500 PF04539 Sigma-70 region 3 LK685_13500 PF04542 Sigma-70 region 2 LK685_13505 PF04545 Sigma-70, region 4 LK685_13505 PF04542 Sigma-70 region 2 LK685_13510 PF03419 Sporulation factor SpoIIGA LK685_13515 PF00082 Subtilase family LK685_13515 PF05922 Peptidase inhibitor I9 LK685_13520 PF12327 FtsZ family, C-terminal domain LK685_13520 PF00091 Tubulin/FtsZ family, GTPase domain LK685_13525 PF02491 SHS2 domain inserted in FTSA LK685_13530 PF06947 Protein of unknown function (DUF1290) LK685_13535 PF05949 Bacterial protein of unknown function (DUF881) LK685_13540 PF05949 Bacterial protein of unknown function (DUF881) LK685_13545 PF08478 POTRA domain, FtsQ-type LK685_13550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LK685_13550 PF01565 FAD binding domain LK685_13555 PF03033 Glycosyltransferase family 28 N-terminal domain LK685_13555 PF04101 Glycosyltransferase family 28 C-terminal domain LK685_13560 PF01098 Cell cycle protein LK685_13565 PF02875 Mur ligase family, glutamate ligase domain LK685_13565 PF08245 Mur ligase middle domain LK685_13570 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LK685_13570 PF00953 Glycosyl transferase family 4 LK685_13575 PF01225 Mur ligase family, catalytic domain LK685_13575 PF02875 Mur ligase family, glutamate ligase domain LK685_13575 PF08245 Mur ligase middle domain LK685_13580 PF03793 PASTA domain LK685_13580 PF03717 Penicillin-binding Protein dimerisation domain LK685_13580 PF00905 Penicillin binding protein transpeptidase domain LK685_13585 PF03793 PASTA domain LK685_13585 PF03717 Penicillin-binding Protein dimerisation domain LK685_13585 PF00905 Penicillin binding protein transpeptidase domain LK685_13595 PF01795 MraW methylase family LK685_13600 PF02381 MraZ protein, putative antitoxin-like LK685_13605 PF10079 Bacillithiol biosynthesis BshC LK685_13610 PF08546 Ketopantoate reductase PanE/ApbA C terminal LK685_13610 PF02558 Ketopantoate reductase PanE/ApbA LK685_13615 PF00583 Acetyltransferase (GNAT) family LK685_13625 PF01783 Ribosomal L32p protein family LK685_13630 PF02620 Large ribosomal RNA subunit accumulation protein YceD LK685_13640 PF05636 HIGH Nucleotidyl Transferase LK685_13645 PF13180 PDZ domain LK685_13645 PF05362 Lon protease (S16) C-terminal proteolytic domain LK685_13650 PF01734 Patatin-like phospholipase LK685_13655 PF07670 Nucleoside recognition LK685_13660 PF01467 Cytidylyltransferase-like LK685_13670 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LK685_13675 PF06133 Control of competence regulator ComK, YlbF/YmcA LK685_13680 PF14003 YlbE-like protein LK685_13685 PF14071 Putative coat protein LK685_13690 PF14504 CAP-associated N-terminal LK685_13690 PF00188 Cysteine-rich secretory protein family LK685_13695 PF00571 CBS domain LK685_13700 PF08868 YugN-like family LK685_13705 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LK685_13710 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LK685_13715 PF00510 Cytochrome c oxidase subunit III LK685_13720 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK685_13725 PF00034 Cytochrome c LK685_13725 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LK685_13725 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LK685_13730 PF01040 UbiA prenyltransferase family LK685_13735 PF02628 Cytochrome oxidase assembly protein LK685_13740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK685_13740 PF02785 Biotin carboxylase C-terminal domain LK685_13740 PF02436 Conserved carboxylase domain LK685_13740 PF00682 HMGL-like LK685_13740 PF00364 Biotin-requiring enzyme LK685_13740 PF00289 Biotin carboxylase, N-terminal domain LK685_13745 PF01098 Cell cycle protein LK685_13750 PF07408 Protein of unknown function (DUF1507) LK685_13755 PF04960 Glutaminase LK685_13765 PF13638 PIN domain LK685_13765 PF02562 PhoH-like protein LK685_13770 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LK685_13775 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LK685_13780 PF14036 YlaH-like protein LK685_13785 PF14492 Elongation Factor G, domain II LK685_13785 PF00009 Elongation factor Tu GTP binding domain LK685_13785 PF03144 Elongation factor Tu domain 2 LK685_13785 PF00679 Elongation factor G C-terminus LK685_13790 PF17259 Family of unknown function (DUF5325) LK685_13800 PF13490 Putative zinc-finger LK685_13805 PF04542 Sigma-70 region 2 LK685_13805 PF08281 Sigma-70, region 4 LK685_13820 PF07504 Fungalysin/Thermolysin Propeptide Motif LK685_13820 PF03413 Peptidase propeptide and YPEB domain LK685_13820 PF02868 Thermolysin metallopeptidase, alpha-helical domain LK685_13820 PF01447 Thermolysin metallopeptidase, catalytic domain LK685_13825 PF04072 Leucine carboxyl methyltransferase LK685_13830 PF00583 Acetyltransferase (GNAT) family LK685_13835 PF00459 Inositol monophosphatase family LK685_13845 PF06335 Protein of unknown function (DUF1054) LK685_13850 PF05256 Uncharacterised protein family (UPF0223) LK685_13855 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LK685_13855 PF01276 Orn/Lys/Arg decarboxylase, major domain LK685_13860 PF13790 SR1 protein LK685_13870 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_13870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK685_13875 PF00364 Biotin-requiring enzyme LK685_13875 PF02817 e3 binding domain LK685_13875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK685_13880 PF02780 Transketolase, C-terminal domain LK685_13880 PF02779 Transketolase, pyrimidine binding domain LK685_13885 PF00676 Dehydrogenase E1 component LK685_13890 PF10368 Putative cell-wall binding lipoprotein LK685_13900 PF01327 Polypeptide deformylase LK685_13910 PF07288 Protein of unknown function (DUF1447) LK685_13915 PF00753 Metallo-beta-lactamase superfamily LK685_13915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LK685_13915 PF17770 Ribonuclease J C-terminal domain LK685_13920 PF01979 Amidohydrolase family LK685_13920 PF13382 Adenine deaminase C-terminal domain LK685_13925 PF02080 TrkA-C domain LK685_13925 PF02254 TrkA-N domain LK685_13930 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LK685_13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_13935 PF00989 PAS fold LK685_13935 PF00512 His Kinase A (phospho-acceptor) domain LK685_13940 PF18277 AbrB C-terminal domain LK685_13940 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LK685_13950 PF17447 Uncharacterized YkpC-like LK685_13955 PF02073 Thermophilic metalloprotease (M29) LK685_13960 PF02558 Ketopantoate reductase PanE/ApbA LK685_13960 PF08546 Ketopantoate reductase PanE/ApbA C terminal LK685_13965 PF12848 ABC transporter LK685_13965 PF00005 ABC transporter LK685_13975 PF10502 Signal peptidase, peptidase S26 LK685_13980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LK685_13980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK685_13985 PF00294 pfkB family carbohydrate kinase LK685_13990 PF08220 DeoR-like helix-turn-helix domain LK685_13990 PF00455 DeoR C terminal sensor domain LK685_13995 PF12704 MacB-like periplasmic core domain LK685_13995 PF02687 FtsX-like permease family LK685_14000 PF00005 ABC transporter LK685_14005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK685_14010 PF04893 Yip1 domain LK685_14015 PF00005 ABC transporter LK685_14015 PF00664 ABC transporter transmembrane region LK685_14020 PF00005 ABC transporter LK685_14020 PF00664 ABC transporter transmembrane region LK685_14025 PF02597 ThiS family LK685_14030 PF02391 MoaE protein LK685_14035 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LK685_14040 PF03454 MoeA C-terminal region (domain IV) LK685_14040 PF00994 Probable molybdopterin binding domain LK685_14040 PF03453 MoeA N-terminal region (domain I and II) LK685_14045 PF00899 ThiF family LK685_14050 PF12804 MobA-like NTP transferase domain LK685_14065 PF00578 AhpC/TSA family LK685_14070 PF00578 AhpC/TSA family LK685_14070 PF10417 C-terminal domain of 1-Cys peroxiredoxin LK685_14075 PF00924 Mechanosensitive ion channel LK685_14080 PF03698 Uncharacterised protein family (UPF0180) LK685_14085 PF07687 Peptidase dimerisation domain LK685_14085 PF01546 Peptidase family M20/M25/M40 LK685_14090 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LK685_14090 PF00132 Bacterial transferase hexapeptide (six repeats) LK685_14090 PF14602 Hexapeptide repeat of succinyl-transferase LK685_14095 PF00258 Flavodoxin LK685_14105 PF00258 Flavodoxin LK685_14110 PF03466 LysR substrate binding domain LK685_14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_14120 PF14156 Antirepressor AbbA LK685_14125 PF04308 Ribonuclease H-like LK685_14130 PF08796 Protein of unknown function (DUF1797) LK685_14135 PF10388 EAL-domain associated signalling protein domain LK685_14135 PF00563 EAL domain LK685_14160 PF10518 TAT (twin-arginine translocation) pathway signal sequence LK685_14160 PF00149 Calcineurin-like phosphoesterase LK685_14165 PF01476 LysM domain LK685_14165 PF03734 L,D-transpeptidase catalytic domain LK685_14170 PF07690 Major Facilitator Superfamily LK685_14175 PF14177 YkyB-like protein LK685_14180 PF00072 Response regulator receiver domain LK685_14180 PF01584 CheW-like domain LK685_14190 PF00155 Aminotransferase class I and II LK685_14195 PF00989 PAS fold LK685_14195 PF08447 PAS fold LK685_14195 PF00512 His Kinase A (phospho-acceptor) domain LK685_14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_14200 PF03717 Penicillin-binding Protein dimerisation domain LK685_14200 PF00905 Penicillin binding protein transpeptidase domain LK685_14205 PF00188 Cysteine-rich secretory protein family LK685_14210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK685_14210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK685_14215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_14215 PF00672 HAMP domain LK685_14215 PF02743 Cache domain LK685_14220 PF00583 Acetyltransferase (GNAT) family LK685_14230 PF11132 Transcriptional regulator protein (SplA) LK685_14235 PF05524 PEP-utilising enzyme, N-terminal LK685_14235 PF00391 PEP-utilising enzyme, mobile domain LK685_14235 PF02896 PEP-utilising enzyme, TIM barrel domain LK685_14240 PF00381 PTS HPr component phosphorylation site LK685_14245 PF02378 Phosphotransferase system, EIIC LK685_14245 PF00367 phosphotransferase system, EIIB LK685_14245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LK685_14250 PF00874 PRD domain LK685_14250 PF03123 CAT RNA binding domain LK685_14255 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LK685_14255 PF00356 Bacterial regulatory proteins, lacI family LK685_14260 PF01321 Creatinase/Prolidase N-terminal domain LK685_14260 PF00557 Metallopeptidase family M24 LK685_14275 PF00578 AhpC/TSA family LK685_14280 PF01943 Polysaccharide biosynthesis protein LK685_14285 PF07486 Cell Wall Hydrolase LK685_14295 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LK685_14300 PF11514 Protein of unknown function (DUF3219) LK685_14310 PF00704 Glycosyl hydrolases family 18 LK685_14315 PF01476 LysM domain LK685_14320 PF01476 LysM domain LK685_14330 PF01638 HxlR-like helix-turn-helix LK685_14335 PF14489 QueF-like protein LK685_14340 PF04055 Radical SAM superfamily LK685_14345 PF01242 6-pyruvoyl tetrahydropterin synthase LK685_14350 PF06508 Queuosine biosynthesis protein QueC LK685_14360 PF00004 ATPase family associated with various cellular activities (AAA) LK685_14360 PF07724 AAA domain (Cdc48 subfamily) LK685_14360 PF10431 C-terminal, D2-small domain, of ClpB protein LK685_14360 PF17871 AAA lid domain LK685_14365 PF01618 MotA/TolQ/ExbB proton channel family LK685_14370 PF13677 Membrane MotB of proton-channel complex MotA/MotB LK685_14370 PF00691 OmpA family LK685_14375 PF01047 MarR family LK685_14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_14380 PF00512 His Kinase A (phospho-acceptor) domain LK685_14380 PF02743 Cache domain LK685_14390 PF09388 Spo0E like sporulation regulatory protein LK685_14395 PF06803 Protein of unknown function (DUF1232) LK685_14400 PF03079 ARD/ARD' family LK685_14405 PF00596 Class II Aldolase and Adducin N-terminal domain LK685_14415 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LK685_14415 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LK685_14420 PF00155 Aminotransferase class I and II LK685_14425 PF00795 Carbon-nitrogen hydrolase LK685_14430 PF01636 Phosphotransferase enzyme family LK685_14435 PF01008 Initiation factor 2 subunit family LK685_14445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LK685_14445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LK685_14450 PF00989 PAS fold LK685_14450 PF13426 PAS domain LK685_14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_14450 PF00512 His Kinase A (phospho-acceptor) domain LK685_14450 PF13188 PAS domain LK685_14455 PF01757 Acyltransferase family LK685_14470 PF02386 Cation transport protein LK685_14475 PF01435 Peptidase family M48 LK685_14480 PF08876 Domain of unknown function (DUF1836) LK685_14485 PF00269 Small, acid-soluble spore proteins, alpha/beta type LK685_14490 PF12791 Anti-sigma factor N-terminus LK685_14495 PF04542 Sigma-70 region 2 LK685_14500 PF03741 Integral membrane protein TerC family LK685_14505 PF09335 SNARE associated Golgi protein LK685_14510 PF00990 Diguanylate cyclase, GGDEF domain LK685_14510 PF00563 EAL domain LK685_14510 PF03707 Bacterial signalling protein N terminal repeat LK685_14515 PF02735 Ku70/Ku80 beta-barrel domain LK685_14520 PF01068 ATP dependent DNA ligase domain LK685_14525 PF00535 Glycosyl transferase family 2 LK685_14535 PF00149 Calcineurin-like phosphoesterase LK685_14545 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LK685_14550 PF01047 MarR family LK685_14565 PF13411 MerR HTH family regulatory protein LK685_14570 PF01769 Divalent cation transporter LK685_14570 PF00571 CBS domain LK685_14570 PF03448 MgtE intracellular N domain LK685_14575 PF11132 Transcriptional regulator protein (SplA) LK685_14580 PF03413 Peptidase propeptide and YPEB domain LK685_14585 PF03413 Peptidase propeptide and YPEB domain LK685_14590 PF00672 HAMP domain LK685_14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_14590 PF00512 His Kinase A (phospho-acceptor) domain LK685_14595 PF00072 Response regulator receiver domain LK685_14595 PF00486 Transcriptional regulatory protein, C terminal LK685_14600 PF07615 YKOF-related Family LK685_14605 PF09819 ABC-type cobalt transport system, permease component LK685_14610 PF00005 ABC transporter LK685_14615 PF02361 Cobalt transport protein LK685_14620 PF01740 STAS domain LK685_14625 PF00082 Subtilase family LK685_14630 PF01717 Cobalamin-independent synthase, Catalytic domain LK685_14630 PF08267 Cobalamin-independent synthase, N-terminal domain LK685_14635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK685_14645 PF02566 OsmC-like protein LK685_14650 PF01047 MarR family LK685_14655 PF02566 OsmC-like protein LK685_14660 PF00171 Aldehyde dehydrogenase family LK685_14665 PF00696 Amino acid kinase family LK685_14665 PF01472 PUA domain LK685_14670 PF00551 Formyl transferase LK685_14670 PF01842 ACT domain LK685_14675 PF00893 Small Multidrug Resistance protein LK685_14680 PF00893 Small Multidrug Resistance protein LK685_14685 PF13302 Acetyltransferase (GNAT) domain LK685_14690 PF12867 DinB superfamily LK685_14695 PF04239 Protein of unknown function (DUF421) LK685_14705 PF00042 Globin LK685_14705 PF00970 Oxidoreductase FAD-binding domain LK685_14705 PF00175 Oxidoreductase NAD-binding domain LK685_14710 PF03061 Thioesterase superfamily LK685_14720 PF10282 Lactonase, 7-bladed beta-propeller LK685_14725 PF00005 ABC transporter LK685_14725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK685_14730 PF00877 NlpC/P60 family LK685_14735 PF13378 Enolase C-terminal domain-like LK685_14735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LK685_14740 PF02016 LD-carboxypeptidase N-terminal domain LK685_14740 PF17676 LD-carboxypeptidase C-terminal domain LK685_14745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK685_14750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK685_14750 PF00005 ABC transporter LK685_14755 PF00528 Binding-protein-dependent transport system inner membrane component LK685_14755 PF12911 N-terminal TM domain of oligopeptide transport permease C LK685_14760 PF00528 Binding-protein-dependent transport system inner membrane component LK685_14765 PF04951 D-aminopeptidase LK685_14770 PF14748 Pyrroline-5-carboxylate reductase dimerisation LK685_14770 PF03807 NADP oxidoreductase coenzyme F420-dependent LK685_14775 PF13180 PDZ domain LK685_14785 PF00535 Glycosyl transferase family 2 LK685_14790 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LK685_14800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_14805 PF13520 Amino acid permease LK685_14810 PF01865 Protein of unknown function DUF47 LK685_14815 PF01384 Phosphate transporter family LK685_14820 PF14171 Toxin SpoIISA, type II toxin-antitoxin system LK685_14825 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system LK685_14835 PF01471 Putative peptidoglycan binding domain LK685_14835 PF01476 LysM domain LK685_14835 PF01510 N-acetylmuramoyl-L-alanine amidase LK685_14840 PF04688 SPP1 phage holin LK685_14845 PF10779 Haemolysin XhlA LK685_14870 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) LK685_14875 PF04865 Baseplate J-like protein LK685_14880 PF10934 Protein of unknown function (DUF2634) LK685_14885 PF10844 Protein of unknown function (DUF2577) LK685_14895 PF01476 LysM domain LK685_14900 PF01464 Transglycosylase SLT domain LK685_14910 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC LK685_14915 PF09393 Phage tail tube protein LK685_14920 PF17481 Phage tail sheath protein beta-sandwich domain LK685_14920 PF04984 Phage tail sheath protein subtilisin-like domain LK685_14920 PF17482 Phage tail sheath C-terminal domain LK685_14935 PF04883 Bacteriophage HK97-gp10, putative tail-component LK685_14940 PF12206 Domain of unknown function (DUF3599) LK685_14945 PF11436 Protein of unknown function (DUF3199) LK685_14950 PF05065 Phage capsid family LK685_14955 PF14550 Putative phage serine protease XkdF LK685_14960 PF04860 Phage portal protein LK685_14965 PF17288 Terminase RNAseH like domain LK685_14965 PF04466 Phage terminase large subunit LK685_14970 PF03592 Terminase small subunit LK685_14970 PF10668 Phage terminase small subunit LK685_14975 PF08281 Sigma-70, region 4 LK685_14980 PF17356 Phage-like element PBSX protein XtrA LK685_14995 PF01695 IstB-like ATP binding protein LK685_15010 PF01381 Helix-turn-helix LK685_15015 PF06114 IrrE N-terminal-like domain LK685_15020 PF05067 Manganese containing catalase LK685_15025 PF05908 Poly-gamma-glutamate hydrolase LK685_15030 PF08000 Bacterial PH domain LK685_15035 PF01471 Putative peptidoglycan binding domain LK685_15035 PF01476 LysM domain LK685_15035 PF01510 N-acetylmuramoyl-L-alanine amidase LK685_15040 PF03795 YCII-related domain LK685_15050 PF18801 response regulator aspartate phosphatase H, N terminal LK685_15055 PF00004 ATPase family associated with various cellular activities (AAA) LK685_15060 PF05163 DinB family LK685_15065 PF01925 Sulfite exporter TauE/SafE LK685_15070 PF08666 SAF domain LK685_15070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LK685_15075 PF08125 Mannitol dehydrogenase C-terminal domain LK685_15075 PF01232 Mannitol dehydrogenase Rossmann domain LK685_15080 PF00356 Bacterial regulatory proteins, lacI family LK685_15085 PF07690 Major Facilitator Superfamily LK685_15090 PF00106 short chain dehydrogenase LK685_15095 PF03786 D-mannonate dehydratase (UxuA) LK685_15100 PF00107 Zinc-binding dehydrogenase LK685_15100 PF08240 Alcohol dehydrogenase GroES-like domain LK685_15105 PF02615 Malate/L-lactate dehydrogenase LK685_15115 PF02614 Glucuronate isomerase LK685_15120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_15125 PF07849 Protein of unknown function (DUF1641) LK685_15135 PF13536 Putative multidrug resistance efflux transporter LK685_15140 PF00005 ABC transporter LK685_15145 PF03649 Uncharacterised protein family (UPF0014) LK685_15150 PF02602 Uroporphyrinogen-III synthase HemD LK685_15160 PF04101 Glycosyltransferase family 28 C-terminal domain LK685_15165 PF00067 Cytochrome P450 LK685_15175 PF00293 NUDIX domain LK685_15180 PF11611 Domain of unknown function (DUF4352) LK685_15185 PF07849 Protein of unknown function (DUF1641) LK685_15190 PF01568 Molydopterin dinucleotide binding domain LK685_15190 PF00384 Molybdopterin oxidoreductase LK685_15190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK685_15190 PF12838 4Fe-4S dicluster domain LK685_15190 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LK685_15195 PF14172 Domain of unknown function (DUF4309) LK685_15200 PF10990 Protein of unknown function (DUF2809) LK685_15205 PF10026 Predicted Zn-dependent protease (DUF2268) LK685_15210 PF14070 Putative motility protein LK685_15215 PF10901 Protein of unknown function (DUF2690) LK685_15220 PF01522 Polysaccharide deacetylase LK685_15220 PF13739 Deacetylase PdaC LK685_15220 PF11738 Protein of unknown function (DUF3298) LK685_15230 PF01040 UbiA prenyltransferase family LK685_15235 PF14154 Domain of unknown function (DUF4306) LK685_15240 PF13783 Domain of unknown function (DUF4177) LK685_15245 PF04073 Aminoacyl-tRNA editing domain LK685_15255 PF13302 Acetyltransferase (GNAT) domain LK685_15260 PF11208 Protein of unknown function (DUF2992) LK685_15265 PF01238 Phosphomannose isomerase type I LK685_15270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK685_15270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LK685_15270 PF02378 Phosphotransferase system, EIIC LK685_15275 PF08279 HTH domain LK685_15275 PF05043 Mga helix-turn-helix domain LK685_15275 PF00874 PRD domain LK685_15275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK685_15280 PF02368 Bacterial Ig-like domain (group 2) LK685_15290 PF03992 Antibiotic biosynthesis monooxygenase LK685_15295 PF10668 Phage terminase small subunit LK685_15300 PF09639 YjcQ protein LK685_15330 PF12671 Putative amidase domain LK685_15340 PF05684 Protein of unknown function (DUF819) LK685_15345 PF13302 Acetyltransferase (GNAT) domain LK685_15350 PF01053 Cys/Met metabolism PLP-dependent enzyme LK685_15355 PF01053 Cys/Met metabolism PLP-dependent enzyme LK685_15360 PF00756 Putative esterase LK685_15370 PF13673 Acetyltransferase (GNAT) domain LK685_15380 PF13361 UvrD-like helicase C-terminal domain LK685_15380 PF00580 UvrD/REP helicase N-terminal domain LK685_15385 PF14069 Stage VI sporulation protein F LK685_15400 PF07098 Protein of unknown function (DUF1360) LK685_15405 PF07552 Spore Coat Protein X and V domain LK685_15415 PF07552 Spore Coat Protein X and V domain LK685_15420 PF10612 Spore coat protein Z LK685_15425 PF10612 Spore coat protein Z LK685_15430 PF14153 Spore coat protein CotO LK685_15440 PF08543 Phosphomethylpyrimidine kinase LK685_15445 PF00899 ThiF family LK685_15450 PF05690 Thiazole biosynthesis protein ThiG LK685_15455 PF02597 ThiS family LK685_15460 PF01266 FAD dependent oxidoreductase LK685_15465 PF02581 Thiamine monophosphate synthase LK685_15470 PF03070 TENA/THI-4/PQQC family LK685_15475 PF02254 TrkA-N domain LK685_15475 PF02080 TrkA-C domain LK685_15475 PF00999 Sodium/hydrogen exchanger family LK685_15480 PF00149 Calcineurin-like phosphoesterase LK685_15485 PF00849 RNA pseudouridylate synthase LK685_15490 PF01513 ATP-NAD kinase LK685_15495 PF04607 Region found in RelA / SpoT proteins LK685_15505 PF01928 CYTH domain LK685_15510 PF01464 Transglycosylase SLT domain LK685_15515 PF01152 Bacterial-like globin LK685_15530 PF08439 Oligopeptidase F LK685_15530 PF01432 Peptidase family M3 LK685_15535 PF06054 Competence protein CoiA-like family LK685_15545 PF05389 Negative regulator of genetic competence (MecA) LK685_15555 PF03741 Integral membrane protein TerC family LK685_15560 PF03960 ArsC family LK685_15565 PF13508 Acetyltransferase (GNAT) domain LK685_15570 PF07690 Major Facilitator Superfamily LK685_15575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK685_15575 PF00005 ABC transporter LK685_15580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK685_15580 PF00005 ABC transporter LK685_15585 PF12911 N-terminal TM domain of oligopeptide transport permease C LK685_15585 PF00528 Binding-protein-dependent transport system inner membrane component LK685_15590 PF00528 Binding-protein-dependent transport system inner membrane component LK685_15595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK685_15600 PF00579 tRNA synthetases class I (W and Y) LK685_15605 PF12227 Protein of unknown function (DUF3603) LK685_15610 PF00528 Binding-protein-dependent transport system inner membrane component LK685_15610 PF12911 N-terminal TM domain of oligopeptide transport permease C LK685_15615 PF00528 Binding-protein-dependent transport system inner membrane component LK685_15620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK685_15625 PF00005 ABC transporter LK685_15625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK685_15630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK685_15630 PF00005 ABC transporter LK685_15635 PF10026 Predicted Zn-dependent protease (DUF2268) LK685_15640 PF00109 Beta-ketoacyl synthase, N-terminal domain LK685_15640 PF02801 Beta-ketoacyl synthase, C-terminal domain LK685_15645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LK685_15645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LK685_15655 PF10815 ComZ LK685_15660 PF02608 ABC transporter substrate-binding protein PnrA-like LK685_15675 PF11151 Protein of unknown function (DUF2929) LK685_15680 PF14168 YjzC-like protein LK685_15685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LK685_15685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LK685_15690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LK685_15690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK685_15695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LK685_15695 PF00117 Glutamine amidotransferase class-I LK685_15700 PF00202 Aminotransferase class-III LK685_15705 PF00696 Amino acid kinase family LK685_15710 PF01960 ArgJ family LK685_15715 PF02774 Semialdehyde dehydrogenase, dimerisation domain LK685_15715 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK685_15720 PF07690 Major Facilitator Superfamily LK685_15725 PF01565 FAD binding domain LK685_15735 PF01883 Iron-sulfur cluster assembly protein LK685_15740 PF00326 Prolyl oligopeptidase family LK685_15755 PF12758 Protein of unknown function (DUF3813) LK685_15760 PF12690 Intracellular proteinase inhibitor LK685_15765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LK685_15765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LK685_15770 PF02645 Uncharacterised protein, DegV family COG1307 LK685_15775 PF02868 Thermolysin metallopeptidase, alpha-helical domain LK685_15775 PF01447 Thermolysin metallopeptidase, catalytic domain LK685_15775 PF03413 Peptidase propeptide and YPEB domain LK685_15775 PF07504 Fungalysin/Thermolysin Propeptide Motif LK685_15780 PF12650 Domain of unknown function (DUF3784) LK685_15790 PF03551 Transcriptional regulator PadR-like family LK685_15795 PF17418 Sporulation delaying protein SdpA LK685_15815 PF04461 Protein of unknown function (DUF520) LK685_15820 PF02219 Methylenetetrahydrofolate reductase LK685_15820 PF02574 Homocysteine S-methyltransferase LK685_15825 PF13673 Acetyltransferase (GNAT) domain LK685_15830 PF13673 Acetyltransferase (GNAT) domain LK685_15830 PF18014 Acetyltransferase (GNAT) domain LK685_15835 PF07690 Major Facilitator Superfamily LK685_15840 PF13378 Enolase C-terminal domain-like LK685_15840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LK685_15845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LK685_15850 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) LK685_15855 PF04029 2-phosphosulpholactate phosphatase LK685_15860 PF01507 Phosphoadenosine phosphosulfate reductase family LK685_15865 PF01747 ATP-sulfurylase LK685_15865 PF14306 PUA-like domain LK685_15875 PF08386 TAP-like protein LK685_15875 PF00561 alpha/beta hydrolase fold LK685_15880 PF13599 Pentapeptide repeats (9 copies) LK685_15885 PF00392 Bacterial regulatory proteins, gntR family LK685_15885 PF00155 Aminotransferase class I and II LK685_15890 PF01810 LysE type translocator LK685_15895 PF05163 DinB family LK685_15900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_15900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_15905 PF00356 Bacterial regulatory proteins, lacI family LK685_15910 PF02311 AraC-like ligand binding domain LK685_15910 PF12833 Helix-turn-helix domain LK685_15915 PF01554 MatE LK685_15925 PF05163 DinB family LK685_15930 PF13537 Glutamine amidotransferase domain LK685_15930 PF00733 Asparagine synthase LK685_15935 PF10949 Protein of unknown function (DUF2777) LK685_15940 PF00082 Subtilase family LK685_15940 PF17936 Bacterial Ig domain LK685_15945 PF07457 Protein of unknown function (DUF1516) LK685_15950 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK685_15955 PF08757 CotH kinase protein LK685_15960 PF09388 Spo0E like sporulation regulatory protein LK685_15965 PF10676 Spore germination protein gerPA/gerPF LK685_15970 PF10803 Spore germination GerPB LK685_15975 PF10737 Spore germination protein GerPC LK685_15985 PF10970 Spore germination protein GerPE LK685_15990 PF10676 Spore germination protein gerPA/gerPF LK685_16000 PF13476 AAA domain LK685_16005 PF12320 Type 5 capsule protein repressor C-terminal domain LK685_16005 PF00149 Calcineurin-like phosphoesterase LK685_16010 PF13361 UvrD-like helicase C-terminal domain LK685_16010 PF00580 UvrD/REP helicase N-terminal domain LK685_16010 PF12705 PD-(D/E)XK nuclease superfamily LK685_16015 PF13361 UvrD-like helicase C-terminal domain LK685_16015 PF12705 PD-(D/E)XK nuclease superfamily LK685_16020 PF02915 Rubrerythrin LK685_16025 PF03860 Domain of Unknown Function (DUF326) LK685_16030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK685_16030 PF12793 Sugar transport-related sRNA regulator N-term LK685_16035 PF07690 Major Facilitator Superfamily LK685_16040 PF05145 Transition state regulatory protein AbrB LK685_16045 PF00356 Bacterial regulatory proteins, lacI family LK685_16050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LK685_16055 PF05116 Sucrose-6F-phosphate phosphohydrolase LK685_16060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_16060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_16065 PF07690 Major Facilitator Superfamily LK685_16070 PF01047 MarR family LK685_16075 PF01494 FAD binding domain LK685_16080 PF10502 Signal peptidase, peptidase S26 LK685_16085 PF09335 SNARE associated Golgi protein LK685_16095 PF11755 Protein of unknown function (DUF3311) LK685_16100 PF00474 Sodium:solute symporter family LK685_16105 PF05901 Excalibur calcium-binding domain LK685_16115 PF06338 ComK protein LK685_16120 PF08858 IDEAL domain LK685_16130 PF00355 Rieske [2Fe-2S] domain LK685_16130 PF01266 FAD dependent oxidoreductase LK685_16135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_16140 PF02632 BioY family LK685_16145 PF00501 AMP-binding enzyme LK685_16145 PF13193 AMP-binding enzyme C-terminal domain LK685_16150 PF00108 Thiolase, N-terminal domain LK685_16150 PF02803 Thiolase, C-terminal domain LK685_16155 PF00300 Histidine phosphatase superfamily (branch 1) LK685_16160 PF01497 Periplasmic binding protein LK685_16170 PF00583 Acetyltransferase (GNAT) family LK685_16175 PF05922 Peptidase inhibitor I9 LK685_16175 PF00082 Subtilase family LK685_16180 PF01435 Peptidase family M48 LK685_16180 PF16491 CAAX prenyl protease N-terminal, five membrane helices LK685_16190 PF13193 AMP-binding enzyme C-terminal domain LK685_16190 PF00501 AMP-binding enzyme LK685_16195 PF13460 NAD(P)H-binding LK685_16200 PF03099 Biotin/lipoate A/B protein ligase family LK685_16200 PF10437 Bacterial lipoate protein ligase C-terminus LK685_16205 PF12706 Beta-lactamase superfamily domain LK685_16210 PF14149 YhfH-like protein LK685_16215 PF00375 Sodium:dicarboxylate symporter family LK685_16220 PF04266 ASCH domain LK685_16225 PF05343 M42 glutamyl aminopeptidase LK685_16235 PF10086 YhfC intramembrane metalloprotease LK685_16240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LK685_16240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LK685_16250 PF00440 Bacterial regulatory proteins, tetR family LK685_16250 PF17932 Tetracyclin repressor-like, C-terminal domain LK685_16255 PF01593 Flavin containing amine oxidoreductase LK685_16260 PF00762 Ferrochelatase LK685_16265 PF01208 Uroporphyrinogen decarboxylase (URO-D) LK685_16270 PF00905 Penicillin binding protein transpeptidase domain LK685_16270 PF00912 Transglycosylase LK685_16275 PF03992 Antibiotic biosynthesis monooxygenase LK685_16290 PF07687 Peptidase dimerisation domain LK685_16290 PF01546 Peptidase family M20/M25/M40 LK685_16295 PF12787 EcsC protein family LK685_16300 PF05975 Bacterial ABC transporter protein EcsB LK685_16305 PF00005 ABC transporter LK685_16310 PF01230 HIT domain LK685_16315 PF00266 Aminotransferase class-V LK685_16320 PF17099 Tryptophan transporter TrpP LK685_16330 PF12732 YtxH-like protein LK685_16335 PF01047 MarR family LK685_16340 PF08963 Protein of unknown function (DUF1878) LK685_16345 PF11667 Putative zincin peptidase LK685_16355 PF09680 Family of unknown function LK685_16360 PF09680 Family of unknown function LK685_16370 PF14147 Sporulation protein YhaL LK685_16375 PF01966 HD domain LK685_16380 PF13514 AAA domain LK685_16385 PF00149 Calcineurin-like phosphoesterase LK685_16395 PF00005 ABC transporter LK685_16395 PF13732 Domain of unknown function (DUF4162) LK685_16400 PF14120 YhzD-like protein LK685_16405 PF00378 Enoyl-CoA hydratase/isomerase LK685_16415 PF02080 TrkA-C domain LK685_16420 PF00999 Sodium/hydrogen exchanger family LK685_16425 PF04055 Radical SAM superfamily LK685_16435 PF08713 DNA alkylation repair enzyme LK685_16440 PF06133 Control of competence regulator ComK, YlbF/YmcA LK685_16445 PF04286 Protein of unknown function (DUF445) LK685_16450 PF14398 YheC/D like ATP-grasp LK685_16455 PF14398 YheC/D like ATP-grasp LK685_16460 PF17277 Family of unknown function (DUF5342) LK685_16465 PF00269 Small, acid-soluble spore proteins, alpha/beta type LK685_16475 PF13460 NAD(P)H-binding LK685_16480 PF00005 ABC transporter LK685_16480 PF00664 ABC transporter transmembrane region LK685_16485 PF00005 ABC transporter LK685_16485 PF00664 ABC transporter transmembrane region LK685_16495 PF00582 Universal stress protein family LK685_16500 PF03553 Na+/H+ antiporter family LK685_16505 PF01063 Amino-transferase class IV LK685_16510 PF01522 Polysaccharide deacetylase LK685_16515 PF02146 Sir2 family LK685_16520 PF00924 Mechanosensitive ion channel LK685_16525 PF17444 Uncharacterized YhdX-like LK685_16530 PF03009 Glycerophosphoryl diester phosphodiesterase family LK685_16535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LK685_16540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LK685_16545 PF00571 CBS domain LK685_16545 PF01595 Cyclin M transmembrane N-terminal domain LK685_16545 PF03471 Transporter associated domain LK685_16550 PF00155 Aminotransferase class I and II LK685_16555 PF13411 MerR HTH family regulatory protein LK685_16560 PF00571 CBS domain LK685_16560 PF03471 Transporter associated domain LK685_16560 PF01595 Cyclin M transmembrane N-terminal domain LK685_16565 PF01553 Acyltransferase LK685_16570 PF00248 Aldo/keto reductase family LK685_16575 PF04542 Sigma-70 region 2 LK685_16575 PF08281 Sigma-70, region 4 LK685_16580 PF13791 Sigma factor regulator C-terminal LK685_16580 PF13800 Sigma factor regulator N-terminal LK685_16585 PF17453 Sigma-M inhibitor LK685_16590 PF00583 Acetyltransferase (GNAT) family LK685_16595 PF00392 Bacterial regulatory proteins, gntR family LK685_16595 PF00155 Aminotransferase class I and II LK685_16600 PF00209 Sodium:neurotransmitter symporter family LK685_16605 PF13520 Amino acid permease LK685_16615 PF00285 Citrate synthase, C-terminal domain LK685_16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_16620 PF03466 LysR substrate binding domain LK685_16625 PF00877 NlpC/P60 family LK685_16625 PF01476 LysM domain LK685_16630 PF00245 Alkaline phosphatase LK685_16635 PF04293 SpoVR like protein LK685_16640 PF05552 Conserved TM helix LK685_16645 PF02082 Transcriptional regulator LK685_16650 PF00877 NlpC/P60 family LK685_16650 PF01476 LysM domain LK685_16655 PF13028 Protein of unknown function (DUF3889) LK685_16660 PF14148 YhdB-like protein LK685_16665 PF03358 NADPH-dependent FMN reductase LK685_16670 PF00196 Bacterial regulatory proteins, luxR family LK685_16670 PF00072 Response regulator receiver domain LK685_16675 PF13185 GAF domain LK685_16675 PF07730 Histidine kinase LK685_16680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK685_16680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK685_16680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK685_16680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK685_16685 PF01266 FAD dependent oxidoreductase LK685_16685 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LK685_16690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK685_16690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK685_16695 PF00230 Major intrinsic protein LK685_16700 PF04309 Glycerol-3-phosphate responsive antiterminator LK685_16705 PF00202 Aminotransferase class-III LK685_16710 PF00795 Carbon-nitrogen hydrolase LK685_16710 PF00583 Acetyltransferase (GNAT) family LK685_16715 PF13419 Haloacid dehalogenase-like hydrolase LK685_16720 PF00571 CBS domain LK685_16725 PF17326 Family of unknown function (DUF5365) LK685_16730 PF01479 S4 domain LK685_16730 PF00849 RNA pseudouridylate synthase LK685_16735 PF04203 Sortase domain LK685_16740 PF00565 Staphylococcal nuclease homologue LK685_16740 PF00149 Calcineurin-like phosphoesterase LK685_16740 PF02872 5'-nucleotidase, C-terminal domain LK685_16740 PF00746 LPXTG cell wall anchor motif LK685_16745 PF07875 Coat F domain LK685_16755 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LK685_16765 PF00375 Sodium:dicarboxylate symporter family LK685_16770 PF00990 Diguanylate cyclase, GGDEF domain LK685_16770 PF07694 5TMR of 5TMR-LYT LK685_16775 PF03180 NLPA lipoprotein LK685_16780 PF00313 'Cold-shock' DNA-binding domain LK685_16785 PF12679 ABC-2 family transporter protein LK685_16795 PF00005 ABC transporter LK685_16800 PF00392 Bacterial regulatory proteins, gntR family LK685_16820 PF03358 NADPH-dependent FMN reductase LK685_16825 PF07690 Major Facilitator Superfamily LK685_16835 PF01047 MarR family LK685_16840 PF04285 Protein of unknown function (DUF444) LK685_16845 PF08298 PrkA AAA domain LK685_16845 PF06798 PrkA serine protein kinase C-terminal domain LK685_16855 PF04519 Polymer-forming cytoskeletal LK685_16860 PF13171 Protein of unknown function (DUF4004) LK685_16865 PF00588 SpoU rRNA Methylase family LK685_16870 PF12671 Putative amidase domain LK685_16875 PF08331 Domain of unknown function (DUF1730) LK685_16890 PF01381 Helix-turn-helix LK685_16900 PF00253 Ribosomal protein S14p/S29e LK685_16910 PF00296 Luciferase-like monooxygenase LK685_16915 PF00528 Binding-protein-dependent transport system inner membrane component LK685_16920 PF09084 NMT1/THI5 like LK685_16925 PF00005 ABC transporter LK685_16930 PF00199 Catalase LK685_16930 PF06628 Catalase-related immune-responsive LK685_16935 PF13040 Fur-regulated basic protein B LK685_16940 PF08031 Berberine and berberine like LK685_16940 PF01565 FAD binding domain LK685_16945 PF01964 Radical SAM ThiC family LK685_16945 PF13667 ThiC-associated domain LK685_16950 PF03575 Peptidase family S51 LK685_16955 PF07875 Coat F domain LK685_16965 PF07070 SpoOM protein LK685_17065 PF14540 Nucleotidyltransferase-like LK685_17065 PF18576 Helix-turn-helix domain LK685_17070 PF11023 Zinc-ribbon containing domain LK685_17075 PF01475 Ferric uptake regulator family LK685_17080 PF00578 AhpC/TSA family LK685_17085 PF00202 Aminotransferase class-III LK685_17090 PF06081 Aromatic acid exporter family member 1 LK685_17095 PF00664 ABC transporter transmembrane region LK685_17095 PF00005 ABC transporter LK685_17100 PF04167 Protein of unknown function (DUF402) LK685_17105 PF14182 YgaB-like protein LK685_17110 PF04259 Small, acid-soluble spore protein, gamma-type LK685_17125 PF00730 HhH-GPD superfamily base excision DNA repair protein LK685_17125 PF14815 NUDIX domain LK685_17130 PF04307 LexA-binding, inner membrane-associated putative hydrolase LK685_17135 PF09586 Bacterial membrane protein YfhO LK685_17140 PF00535 Glycosyl transferase family 2 LK685_17145 PF00561 alpha/beta hydrolase fold LK685_17150 PF13630 SdpI/YhfL protein family LK685_17155 PF08239 Bacterial SH3 domain LK685_17160 PF14043 WVELL protein LK685_17165 PF08176 Small acid-soluble spore protein K family LK685_17170 PF07690 Major Facilitator Superfamily LK685_17175 PF08838 Protein of unknown function (DUF1811) LK685_17180 PF02631 RecX family LK685_17185 PF08338 Domain of unknown function (DUF1731) LK685_17185 PF01370 NAD dependent epimerase/dehydratase family LK685_17190 PF14152 YfhE-like protein LK685_17195 PF14151 YfhD-like protein LK685_17200 PF00881 Nitroreductase family LK685_17205 PF02567 Phenazine biosynthesis-like protein LK685_17210 PF01032 FecCD transport family LK685_17215 PF01032 FecCD transport family LK685_17220 PF01497 Periplasmic binding protein LK685_17225 PF03706 Lysylphosphatidylglycerol synthase TM region LK685_17225 PF09924 Uncharacterised conserved protein (DUF2156) LK685_17230 PF01047 MarR family LK685_17235 PF07690 Major Facilitator Superfamily LK685_17240 PF12867 DinB superfamily LK685_17245 PF07690 Major Facilitator Superfamily LK685_17250 PF17922 Tetracyclin repressor-like, C-terminal domain LK685_17250 PF00440 Bacterial regulatory proteins, tetR family LK685_17255 PF01757 Acyltransferase family LK685_17260 PF01674 Lipase (class 2) LK685_17265 PF03551 Transcriptional regulator PadR-like family LK685_17265 PF10400 Virulence activator alpha C-term LK685_17280 PF00005 ABC transporter LK685_17285 PF00072 Response regulator receiver domain LK685_17285 PF00196 Bacterial regulatory proteins, luxR family LK685_17290 PF07730 Histidine kinase LK685_17295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK685_17295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK685_17300 PF01261 Xylose isomerase-like TIM barrel LK685_17305 PF00083 Sugar (and other) transporter LK685_17310 PF12833 Helix-turn-helix domain LK685_17310 PF02311 AraC-like ligand binding domain LK685_17315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_17320 PF07681 DoxX LK685_17325 PF00005 ABC transporter LK685_17325 PF00664 ABC transporter transmembrane region LK685_17330 PF00005 ABC transporter LK685_17330 PF00664 ABC transporter transmembrane region LK685_17335 PF00367 phosphotransferase system, EIIB LK685_17335 PF02378 Phosphotransferase system, EIIC LK685_17340 PF01418 Helix-turn-helix domain, rpiR family LK685_17340 PF01380 SIS domain LK685_17345 PF11975 Family 4 glycosyl hydrolase C-terminal domain LK685_17345 PF02056 Family 4 glycosyl hydrolase LK685_17350 PF06013 Proteins of 100 residues with WXG LK685_17365 PF17353 Family of unknown function (DUF5381) LK685_17370 PF17353 Family of unknown function (DUF5381) LK685_17375 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LK685_17380 PF08141 Small acid-soluble spore protein H family LK685_17385 PF02954 Bacterial regulatory protein, Fis family LK685_17385 PF00158 Sigma-54 interaction domain LK685_17385 PF01590 GAF domain LK685_17390 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_17390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK685_17395 PF02817 e3 binding domain LK685_17395 PF00364 Biotin-requiring enzyme LK685_17395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK685_17400 PF02780 Transketolase, C-terminal domain LK685_17400 PF02779 Transketolase, pyrimidine binding domain LK685_17405 PF00676 Dehydrogenase E1 component LK685_17420 PF01207 Dihydrouridine synthase (Dus) LK685_17425 PF14118 YfzA-like protein LK685_17430 PF01938 TRAM domain LK685_17430 PF05958 tRNA (Uracil-5-)-methyltransferase LK685_17435 PF00730 HhH-GPD superfamily base excision DNA repair protein LK685_17440 PF01544 CorA-like Mg2+ transporter protein LK685_17445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK685_17445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK685_17450 PF01522 Polysaccharide deacetylase LK685_17460 PF04055 Radical SAM superfamily LK685_17460 PF08756 YfkB-like domain LK685_17465 PF00924 Mechanosensitive ion channel LK685_17470 PF14167 YfkD-like protein LK685_17475 PF01699 Sodium/calcium exchanger protein LK685_17480 PF07690 Major Facilitator Superfamily LK685_17485 PF03631 Virulence factor BrkB LK685_17495 PF01451 Low molecular weight phosphotyrosine protein phosphatase LK685_17500 PF06569 Protein of unknown function (DUF1128) LK685_17505 PF07690 Major Facilitator Superfamily LK685_17510 PF01965 DJ-1/PfpI family LK685_17515 PF00149 Calcineurin-like phosphoesterase LK685_17515 PF02872 5'-nucleotidase, C-terminal domain LK685_17520 PF00881 Nitroreductase family LK685_17525 PF07702 UTRA domain LK685_17525 PF00392 Bacterial regulatory proteins, gntR family LK685_17530 PF00128 Alpha amylase, catalytic domain LK685_17530 PF16657 Maltogenic Amylase, C-terminal domain LK685_17535 PF00367 phosphotransferase system, EIIB LK685_17535 PF02378 Phosphotransferase system, EIIC LK685_17540 PF03323 Bacillus/Clostridium GerA spore germination protein LK685_17545 PF05504 Spore germination B3/ GerAC like, C-terminal LK685_17555 PF03845 Spore germination protein LK685_17560 PF01235 Sodium:alanine symporter family LK685_17565 PF09350 Domain of unknown function (DUF1992) LK685_17575 PF00884 Sulfatase LK685_17580 PF00367 phosphotransferase system, EIIB LK685_17580 PF02378 Phosphotransferase system, EIIC LK685_17585 PF00557 Metallopeptidase family M24 LK685_17590 PF11588 Protein of unknown function (DUF3243) LK685_17600 PF11121 Protein of unknown function (DUF2639) LK685_17605 PF03475 3-alpha domain LK685_17605 PF03473 MOSC domain LK685_17610 PF00708 Acylphosphatase LK685_17615 PF02898 Nitric oxide synthase, oxygenase domain LK685_17620 PF00753 Metallo-beta-lactamase superfamily LK685_17625 PF03600 Citrate transporter LK685_17630 PF03401 Tripartite tricarboxylate transporter family receptor LK685_17635 PF12431 Transcriptional regulator LK685_17635 PF08279 HTH domain LK685_17635 PF00072 Response regulator receiver domain LK685_17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_17640 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LK685_17645 PF00939 Sodium:sulfate symporter transmembrane region LK685_17650 PF00544 Pectate lyase LK685_17655 PF11181 Heat induced stress protein YflT LK685_17660 PF11486 Protein of unknown function (DUF3212) LK685_17665 PF01497 Periplasmic binding protein LK685_17670 PF01032 FecCD transport family LK685_17675 PF01032 FecCD transport family LK685_17680 PF00005 ABC transporter LK685_17685 PF00107 Zinc-binding dehydrogenase LK685_17685 PF16884 N-terminal domain of oxidoreductase LK685_17690 PF00583 Acetyltransferase (GNAT) family LK685_17695 PF00270 DEAD/DEAH box helicase LK685_17695 PF00271 Helicase conserved C-terminal domain LK685_17700 PF12848 ABC transporter LK685_17700 PF00005 ABC transporter LK685_17710 PF07690 Major Facilitator Superfamily LK685_17715 PF13411 MerR HTH family regulatory protein LK685_17720 PF10787 Uncharacterised protein from bacillus cereus group LK685_17725 PF16326 ABC transporter C-terminal domain LK685_17725 PF00005 ABC transporter LK685_17725 PF12848 ABC transporter LK685_17730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_17735 PF00171 Aldehyde dehydrogenase family LK685_17740 PF13520 Amino acid permease LK685_17745 PF13419 Haloacid dehalogenase-like hydrolase LK685_17750 PF07690 Major Facilitator Superfamily LK685_17755 PF03407 Nucleotide-diphospho-sugar transferase LK685_17760 PF00535 Glycosyl transferase family 2 LK685_17765 PF03407 Nucleotide-diphospho-sugar transferase LK685_17770 PF16363 GDP-mannose 4,6 dehydratase LK685_17775 PF00483 Nucleotidyl transferase LK685_17780 PF00884 Sulfatase LK685_17785 PF00667 FAD binding domain LK685_17785 PF00175 Oxidoreductase NAD-binding domain LK685_17785 PF00067 Cytochrome P450 LK685_17785 PF00258 Flavodoxin LK685_17790 PF13037 Domain of unknown function (DUF3898) LK685_17790 PF13039 Protein of unknown function (DUF3900) LK685_17795 PF01494 FAD binding domain LK685_17800 PF01047 MarR family LK685_17805 PF00892 EamA-like transporter family LK685_17810 PF01027 Inhibitor of apoptosis-promoting Bax1 LK685_17815 PF10055 Uncharacterized small protein (DUF2292) LK685_17820 PF01740 STAS domain LK685_17830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_17835 PF03992 Antibiotic biosynthesis monooxygenase LK685_17840 PF04239 Protein of unknown function (DUF421) LK685_17845 PF02056 Family 4 glycosyl hydrolase LK685_17845 PF11975 Family 4 glycosyl hydrolase C-terminal domain LK685_17850 PF00528 Binding-protein-dependent transport system inner membrane component LK685_17855 PF00528 Binding-protein-dependent transport system inner membrane component LK685_17860 PF01547 Bacterial extracellular solute-binding protein LK685_17870 PF08532 Beta-galactosidase trimerisation domain LK685_17870 PF08533 Beta-galactosidase C-terminal domain LK685_17870 PF02449 Beta-galactosidase LK685_17875 PF00657 GDSL-like Lipase/Acylhydrolase LK685_17880 PF01839 FG-GAP repeat LK685_17880 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LK685_17885 PF18370 Rhamnogalacturonan I lyases beta-sheet domain LK685_17890 PF04854 Protein of unknown function, DUF624 LK685_17895 PF09224 Domain of unknown function (DUF1961) LK685_17900 PF13472 GDSL-like Lipase/Acylhydrolase family LK685_17905 PF12833 Helix-turn-helix domain LK685_17910 PF07470 Glycosyl Hydrolase Family 88 LK685_17915 PF00528 Binding-protein-dependent transport system inner membrane component LK685_17920 PF00528 Binding-protein-dependent transport system inner membrane component LK685_17925 PF13416 Bacterial extracellular solute-binding protein LK685_17930 PF00072 Response regulator receiver domain LK685_17930 PF12833 Helix-turn-helix domain LK685_17935 PF02743 Cache domain LK685_17935 PF00672 HAMP domain LK685_17935 PF06580 Histidine kinase LK685_17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_17940 PF04854 Protein of unknown function, DUF624 LK685_17945 PF14150 YesK-like protein LK685_17950 PF00583 Acetyltransferase (GNAT) family LK685_17955 PF05067 Manganese containing catalase LK685_17960 PF12652 CotJB protein LK685_17965 PF11007 Spore coat associated protein JA (CotJA) LK685_17970 PF01370 NAD dependent epimerase/dehydratase family LK685_17975 PF12680 SnoaL-like domain LK685_17980 PF00440 Bacterial regulatory proteins, tetR family LK685_17990 PF01709 Transcriptional regulator LK685_18000 PF18801 response regulator aspartate phosphatase H, N terminal LK685_18000 PF13176 Tetratricopeptide repeat LK685_18010 PF04740 LXG domain of WXG superfamily LK685_18015 PF04634 Protein of unknown function, DUF600 LK685_18030 PF10544 T5orf172 domain LK685_18045 PF00239 Resolvase, N terminal domain LK685_18045 PF18010 Cry35Ab1 HTH C-terminal domain LK685_18050 PF13408 Recombinase zinc beta ribbon domain LK685_18050 PF07508 Recombinase LK685_18055 PF01938 TRAM domain LK685_18055 PF05958 tRNA (Uracil-5-)-methyltransferase LK685_18060 PF00781 Diacylglycerol kinase catalytic domain LK685_18065 PF00873 AcrB/AcrD/AcrF family LK685_18070 PF00440 Bacterial regulatory proteins, tetR family LK685_18075 PF02637 GatB domain LK685_18075 PF02934 GatB/GatE catalytic domain LK685_18080 PF01425 Amidase LK685_18085 PF02686 Glu-tRNAGln amidotransferase C subunit LK685_18090 PF00474 Sodium:solute symporter family LK685_18095 PF02308 MgtC family LK685_18100 PF01636 Phosphotransferase enzyme family LK685_18105 PF07537 CamS sex pheromone cAM373 precursor LK685_18110 PF12826 Helix-hairpin-helix motif LK685_18110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LK685_18110 PF03120 NAD-dependent DNA ligase OB-fold domain LK685_18110 PF01653 NAD-dependent DNA ligase adenylation domain LK685_18110 PF00533 BRCA1 C Terminus (BRCT) domain LK685_18115 PF13361 UvrD-like helicase C-terminal domain LK685_18115 PF00580 UvrD/REP helicase N-terminal domain LK685_18120 PF01884 PcrB family LK685_18125 PF01645 Conserved region in glutamate synthase LK685_18130 PF01371 Trp repressor protein LK685_18135 PF17479 Protein of unknown function (DUF3048) C-terminal domain LK685_18135 PF11258 Protein of unknown function (DUF3048) N-terminal domain LK685_18140 PF01979 Amidohydrolase family LK685_18140 PF13382 Adenine deaminase C-terminal domain LK685_18145 PF11127 Protein of unknown function (DUF2892) LK685_18150 PF13520 Amino acid permease LK685_18155 PF01037 Lrp/AsnC ligand binding domain LK685_18160 PF02844 Phosphoribosylglycinamide synthetase, N domain LK685_18160 PF02843 Phosphoribosylglycinamide synthetase, C domain LK685_18160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LK685_18165 PF02142 MGS-like domain LK685_18165 PF01808 AICARFT/IMPCHase bienzyme LK685_18170 PF00551 Formyl transferase LK685_18175 PF00586 AIR synthase related protein, N-terminal domain LK685_18175 PF02769 AIR synthase related protein, C-terminal domain LK685_18180 PF00156 Phosphoribosyl transferase domain LK685_18185 PF02769 AIR synthase related protein, C-terminal domain LK685_18185 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LK685_18185 PF00586 AIR synthase related protein, N-terminal domain LK685_18195 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LK685_18200 PF01259 SAICAR synthetase LK685_18205 PF10397 Adenylosuccinate lyase C-terminus LK685_18205 PF00206 Lyase LK685_18210 PF02222 ATP-grasp domain LK685_18210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LK685_18215 PF00731 AIR carboxylase LK685_18220 PF14044 NETI protein LK685_18225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LK685_18230 PF13076 Fur-regulated basic protein A LK685_18240 PF00860 Permease family LK685_18250 PF04542 Sigma-70 region 2 LK685_18250 PF04545 Sigma-70, region 4 LK685_18255 PF02540 NAD synthase LK685_18255 PF00958 GMP synthase C terminal domain LK685_18255 PF00117 Glutamine amidotransferase class-I LK685_18260 PF01841 Transglutaminase-like superfamily LK685_18260 PF13559 Domain of unknown function (DUF4129) LK685_18260 PF11992 Domain of unknown function (DUF3488) LK685_18265 PF01882 Protein of unknown function DUF58 LK685_18270 PF07726 ATPase family associated with various cellular activities (AAA) LK685_18270 PF17863 AAA lid domain LK685_18275 PF01545 Cation efflux family LK685_18275 PF16916 Dimerisation domain of Zinc Transporter LK685_18285 PF00324 Amino acid permease LK685_18290 PF07732 Multicopper oxidase LK685_18290 PF07731 Multicopper oxidase LK685_18290 PF00394 Multicopper oxidase LK685_18295 PF13170 Protein of unknown function (DUF4003) LK685_18300 PF12697 Alpha/beta hydrolase family LK685_18305 PF14169 Cold-inducible protein YdjO LK685_18315 PF07676 WD40-like Beta Propeller Repeat LK685_18320 PF03330 Lytic transglycolase LK685_18325 PF00107 Zinc-binding dehydrogenase LK685_18325 PF08240 Alcohol dehydrogenase GroES-like domain LK685_18330 PF00083 Sugar (and other) transporter LK685_18335 PF07885 Ion channel LK685_18340 PF13421 SPFH domain-Band 7 family LK685_18345 PF04536 TPM domain LK685_18350 PF08271 TFIIB zinc-binding LK685_18355 PF04012 PspA/IM30 family LK685_18360 PF00294 pfkB family carbohydrate kinase LK685_18370 PF08240 Alcohol dehydrogenase GroES-like domain LK685_18370 PF00107 Zinc-binding dehydrogenase LK685_18375 PF00931 NB-ARC domain LK685_18375 PF13176 Tetratricopeptide repeat LK685_18390 PF00118 TCP-1/cpn60 chaperonin family LK685_18395 PF00166 Chaperonin 10 Kd subunit LK685_18400 PF02517 CPBP intramembrane metalloprotease LK685_18405 PF14146 Domain of unknown function (DUF4305) LK685_18410 PF00902 Sec-independent protein translocase protein (TatC) LK685_18415 PF02416 mttA/Hcf106 family LK685_18420 PF06971 Putative DNA-binding protein N-terminus LK685_18420 PF02629 CoA binding domain LK685_18425 PF01967 MoaC family LK685_18430 PF12848 ABC transporter LK685_18430 PF00005 ABC transporter LK685_18430 PF16326 ABC transporter C-terminal domain LK685_18435 PF00814 Glycoprotease family LK685_18440 PF00583 Acetyltransferase (GNAT) family LK685_18445 PF00814 Glycoprotease family LK685_18450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LK685_18455 PF02769 AIR synthase related protein, C-terminal domain LK685_18455 PF00586 AIR synthase related protein, N-terminal domain LK685_18500 PF02156 Glycosyl hydrolase family 26 LK685_18505 PF01238 Phosphomannose isomerase type I LK685_18510 PF00480 ROK family LK685_18515 PF00392 Bacterial regulatory proteins, gntR family LK685_18515 PF07702 UTRA domain LK685_18520 PF00232 Glycosyl hydrolase family 1 LK685_18525 PF02378 Phosphotransferase system, EIIC LK685_18530 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LK685_18535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LK685_18540 PF07690 Major Facilitator Superfamily LK685_18545 PF07563 Protein of unknown function (DUF1541) LK685_18555 PF00583 Acetyltransferase (GNAT) family LK685_18560 PF16302 Domain of unknown function (DUF4944) LK685_18565 PF08818 Domain of unknown function (DU1801) LK685_18570 PF00245 Alkaline phosphatase LK685_18575 PF11611 Domain of unknown function (DUF4352) LK685_18575 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LK685_18580 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LK685_18585 PF00704 Glycosyl hydrolases family 18 LK685_18585 PF01476 LysM domain LK685_18590 PF07729 FCD domain LK685_18590 PF00392 Bacterial regulatory proteins, gntR family LK685_18595 PF01925 Sulfite exporter TauE/SafE LK685_18600 PF07690 Major Facilitator Superfamily LK685_18605 PF01047 MarR family LK685_18610 PF00881 Nitroreductase family LK685_18615 PF03176 MMPL family LK685_18620 PF01047 MarR family LK685_18625 PF05163 DinB family LK685_18630 PF00324 Amino acid permease LK685_18635 PF00005 ABC transporter LK685_18635 PF12848 ABC transporter LK685_18640 PF00583 Acetyltransferase (GNAT) family LK685_18645 PF13564 DoxX-like family LK685_18650 PF00440 Bacterial regulatory proteins, tetR family LK685_18655 PF10676 Spore germination protein gerPA/gerPF LK685_18660 PF10676 Spore germination protein gerPA/gerPF LK685_18665 PF00011 Hsp20/alpha crystallin family LK685_18670 PF04239 Protein of unknown function (DUF421) LK685_18675 PF04239 Protein of unknown function (DUF421) LK685_18680 PF10676 Spore germination protein gerPA/gerPF LK685_18690 PF10676 Spore germination protein gerPA/gerPF LK685_18695 PF00085 Thioredoxin LK685_18700 PF07681 DoxX LK685_18705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK685_18710 PF00881 Nitroreductase family LK685_18715 PF16916 Dimerisation domain of Zinc Transporter LK685_18715 PF01545 Cation efflux family LK685_18720 PF13411 MerR HTH family regulatory protein LK685_18720 PF06445 GyrI-like small molecule binding domain LK685_18725 PF04474 Protein of unknown function (DUF554) LK685_18730 PF12697 Alpha/beta hydrolase family LK685_18735 PF03176 MMPL family LK685_18740 PF00072 Response regulator receiver domain LK685_18740 PF00196 Bacterial regulatory proteins, luxR family LK685_18745 PF07730 Histidine kinase LK685_18745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_18760 PF02627 Carboxymuconolactone decarboxylase family LK685_18770 PF01613 Flavin reductase like domain LK685_18775 PF00392 Bacterial regulatory proteins, gntR family LK685_18775 PF00155 Aminotransferase class I and II LK685_18780 PF00892 EamA-like transporter family LK685_18785 PF12746 GNAT acetyltransferase LK685_18795 PF02040 Arsenical pump membrane protein LK685_18800 PF01022 Bacterial regulatory protein, arsR family LK685_18805 PF16859 Tetracyclin repressor-like, C-terminal domain LK685_18805 PF00440 Bacterial regulatory proteins, tetR family LK685_18810 PF07690 Major Facilitator Superfamily LK685_18815 PF02525 Flavodoxin-like fold LK685_18820 PF01638 HxlR-like helix-turn-helix LK685_18825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LK685_18825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LK685_18830 PF01638 HxlR-like helix-turn-helix LK685_18835 PF06821 Serine hydrolase LK685_18840 PF01575 MaoC like domain LK685_18845 PF00155 Aminotransferase class I and II LK685_18845 PF00392 Bacterial regulatory proteins, gntR family LK685_18850 PF00892 EamA-like transporter family LK685_18855 PF00440 Bacterial regulatory proteins, tetR family LK685_18860 PF00381 PTS HPr component phosphorylation site LK685_18870 PF08818 Domain of unknown function (DU1801) LK685_18880 PF07690 Major Facilitator Superfamily LK685_18885 PF00155 Aminotransferase class I and II LK685_18885 PF00392 Bacterial regulatory proteins, gntR family LK685_18890 PF12833 Helix-turn-helix domain LK685_18890 PF06445 GyrI-like small molecule binding domain LK685_18895 PF00892 EamA-like transporter family LK685_18900 PF12833 Helix-turn-helix domain LK685_18900 PF02311 AraC-like ligand binding domain LK685_18910 PF02559 CarD-like/TRCF domain LK685_18915 PF00313 'Cold-shock' DNA-binding domain LK685_18920 PF01965 DJ-1/PfpI family LK685_18945 PF01381 Helix-turn-helix LK685_18950 PF04740 LXG domain of WXG superfamily LK685_18950 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LK685_18960 PF13302 Acetyltransferase (GNAT) domain LK685_19000 PF17283 SprT-like zinc ribbon domain LK685_19000 PF10263 SprT-like family LK685_19010 PF17674 HHH domain LK685_19010 PF00575 S1 RNA binding domain LK685_19010 PF09371 Tex-like protein N-terminal domain LK685_19010 PF16921 Tex protein YqgF-like domain LK685_19015 PF01047 MarR family LK685_19020 PF01878 EVE domain LK685_19040 PF07228 Stage II sporulation protein E (SpoIIE) LK685_19045 PF04545 Sigma-70, region 4 LK685_19045 PF04539 Sigma-70 region 3 LK685_19045 PF04542 Sigma-70 region 2 LK685_19050 PF13581 Histidine kinase-like ATPase domain LK685_19055 PF01740 STAS domain LK685_19060 PF07228 Stage II sporulation protein E (SpoIIE) LK685_19060 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain LK685_19065 PF13581 Histidine kinase-like ATPase domain LK685_19070 PF01740 STAS domain LK685_19075 PF08678 Rsbr N terminal LK685_19075 PF01740 STAS domain LK685_19080 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LK685_19085 PF01402 Ribbon-helix-helix protein, copG family LK685_19090 PF01168 Alanine racemase, N-terminal domain LK685_19090 PF00842 Alanine racemase, C-terminal domain LK685_19100 PF01648 4'-phosphopantetheinyl transferase superfamily LK685_19105 PF01694 Rhomboid family LK685_19110 PF03703 Bacterial PH domain LK685_19115 PF03703 Bacterial PH domain LK685_19120 PF00270 DEAD/DEAH box helicase LK685_19120 PF00271 Helicase conserved C-terminal domain LK685_19125 PF08245 Mur ligase middle domain LK685_19125 PF02875 Mur ligase family, glutamate ligase domain LK685_19125 PF01225 Mur ligase family, catalytic domain LK685_19130 PF01820 D-ala D-ala ligase N-terminus LK685_19130 PF07478 D-ala D-ala ligase C-terminus LK685_19135 PF00085 Thioredoxin LK685_19140 PF01545 Cation efflux family LK685_19140 PF16916 Dimerisation domain of Zinc Transporter LK685_19150 PF13040 Fur-regulated basic protein B LK685_19155 PF02770 Acyl-CoA dehydrogenase, middle domain LK685_19155 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LK685_19155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK685_19170 PF00005 ABC transporter LK685_19175 PF01594 AI-2E family transporter LK685_19180 PF00375 Sodium:dicarboxylate symporter family LK685_19185 PF00072 Response regulator receiver domain LK685_19185 PF08279 HTH domain LK685_19190 PF17203 Single cache domain 3 LK685_19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_19190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LK685_19195 PF03480 Bacterial extracellular solute-binding protein, family 7 LK685_19200 PF05067 Manganese containing catalase LK685_19205 PF16291 Domain of unknown function (DUF4937 LK685_19210 PF07883 Cupin domain LK685_19215 PF00477 Small hydrophilic plant seed protein LK685_19215 PF10685 Stress-induced bacterial acidophilic repeat motif LK685_19220 PF12787 EcsC protein family LK685_19225 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LK685_19230 PF04226 Transglycosylase associated protein LK685_19235 PF01566 Natural resistance-associated macrophage protein LK685_19250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK685_19250 PF00205 Thiamine pyrophosphate enzyme, central domain LK685_19250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK685_19255 PF00293 NUDIX domain LK685_19260 PF13520 Amino acid permease LK685_19265 PF03170 Bacterial cellulose synthase subunit LK685_19275 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) LK685_19280 PF00990 Diguanylate cyclase, GGDEF domain LK685_19290 PF01131 DNA topoisomerase LK685_19290 PF01751 Toprim domain LK685_19295 PF01037 Lrp/AsnC ligand binding domain LK685_19300 PF12823 Domain of unknown function (DUF3817) LK685_19305 PF10997 Alternate to MurJ LK685_19310 PF16242 Pyridoxamine 5'-phosphate oxidase like LK685_19315 PF13302 Acetyltransferase (GNAT) domain LK685_19330 PF13649 Methyltransferase domain LK685_19335 PF00501 AMP-binding enzyme LK685_19335 PF13193 AMP-binding enzyme C-terminal domain LK685_19340 PF05043 Mga helix-turn-helix domain LK685_19340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LK685_19340 PF08279 HTH domain LK685_19340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK685_19340 PF00874 PRD domain LK685_19345 PF00248 Aldo/keto reductase family LK685_19350 PF03717 Penicillin-binding Protein dimerisation domain LK685_19350 PF00905 Penicillin binding protein transpeptidase domain LK685_19350 PF05223 NTF2-like N-terminal transpeptidase domain LK685_19355 PF03992 Antibiotic biosynthesis monooxygenase LK685_19360 PF13129 Protein of unknown function (DUF3953) LK685_19365 PF13472 GDSL-like Lipase/Acylhydrolase family LK685_19370 PF09339 IclR helix-turn-helix domain LK685_19370 PF01614 Bacterial transcriptional regulator LK685_19375 PF02626 Carboxyltransferase domain, subdomain A and B LK685_19380 PF02682 Carboxyltransferase domain, subdomain C and D LK685_19385 PF07286 Protein of unknown function (DUF1445) LK685_19390 PF01566 Natural resistance-associated macrophage protein LK685_19395 PF03746 LamB/YcsF family LK685_19410 PF07977 FabA-like domain LK685_19415 PF01738 Dienelactone hydrolase family LK685_19420 PF10502 Signal peptidase, peptidase S26 LK685_19425 PF00180 Isocitrate/isopropylmalate dehydrogenase LK685_19430 PF08125 Mannitol dehydrogenase C-terminal domain LK685_19430 PF01232 Mannitol dehydrogenase Rossmann domain LK685_19435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK685_19440 PF02378 Phosphotransferase system, EIIC LK685_19440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LK685_19450 PF05573 NosL LK685_19450 PF08220 DeoR-like helix-turn-helix domain LK685_19455 PF05425 Copper resistance protein D LK685_19455 PF13115 YtkA-like LK685_19455 PF04234 CopC domain LK685_19460 PF07987 Domain of unkown function (DUF1775) LK685_19470 PF06800 Sugar transport protein LK685_19475 PF00171 Aldehyde dehydrogenase family LK685_19480 PF00202 Aminotransferase class-III LK685_19485 PF00392 Bacterial regulatory proteins, gntR family LK685_19485 PF00155 Aminotransferase class I and II LK685_19490 PF01022 Bacterial regulatory protein, arsR family LK685_19495 PF03992 Antibiotic biosynthesis monooxygenase LK685_19500 PF00881 Nitroreductase family LK685_19505 PF00440 Bacterial regulatory proteins, tetR family LK685_19510 PF07690 Major Facilitator Superfamily LK685_19515 PF01497 Periplasmic binding protein LK685_19520 PF00005 ABC transporter LK685_19525 PF01032 FecCD transport family LK685_19530 PF01032 FecCD transport family LK685_19535 PF00696 Amino acid kinase family LK685_19535 PF13840 ACT domain LK685_19540 PF09680 Family of unknown function LK685_19545 PF09680 Family of unknown function LK685_19550 PF11131 Rap-phr extracellular signalling LK685_19555 PF18801 response regulator aspartate phosphatase H, N terminal LK685_19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_19560 PF00672 HAMP domain LK685_19560 PF00512 His Kinase A (phospho-acceptor) domain LK685_19565 PF00072 Response regulator receiver domain LK685_19565 PF00486 Transcriptional regulatory protein, C terminal LK685_19570 PF12704 MacB-like periplasmic core domain LK685_19570 PF02687 FtsX-like permease family LK685_19575 PF00005 ABC transporter LK685_19580 PF03845 Spore germination protein LK685_19585 PF05504 Spore germination B3/ GerAC like, C-terminal LK685_19590 PF03323 Bacillus/Clostridium GerA spore germination protein LK685_19600 PF13229 Right handed beta helix region LK685_19600 PF12708 Pectate lyase superfamily protein LK685_19605 PF00854 POT family LK685_19610 PF00561 alpha/beta hydrolase fold LK685_19625 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LK685_19630 PF02441 Flavoprotein LK685_19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_19635 PF03466 LysR substrate binding domain LK685_19640 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK685_19645 PF00528 Binding-protein-dependent transport system inner membrane component LK685_19650 PF00005 ABC transporter LK685_19660 PF01648 4'-phosphopantetheinyl transferase superfamily LK685_19665 PF00392 Bacterial regulatory proteins, gntR family LK685_19665 PF00155 Aminotransferase class I and II LK685_19670 PF00892 EamA-like transporter family LK685_19675 PF14317 YcxB-like protein LK685_19680 PF07690 Major Facilitator Superfamily LK685_19685 PF00975 Thioesterase domain LK685_19690 PF00501 AMP-binding enzyme LK685_19690 PF13193 AMP-binding enzyme C-terminal domain LK685_19690 PF00668 Condensation domain LK685_19690 PF00550 Phosphopantetheine attachment site LK685_19690 PF00975 Thioesterase domain LK685_19695 PF13193 AMP-binding enzyme C-terminal domain LK685_19695 PF00501 AMP-binding enzyme LK685_19695 PF00668 Condensation domain LK685_19695 PF00550 Phosphopantetheine attachment site LK685_19705 PF17584 Bacillus competence protein S LK685_19715 PF00550 Phosphopantetheine attachment site LK685_19715 PF00668 Condensation domain LK685_19715 PF00501 AMP-binding enzyme LK685_19715 PF13193 AMP-binding enzyme C-terminal domain LK685_19720 PF01638 HxlR-like helix-turn-helix LK685_19725 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LK685_19730 PF01380 SIS domain LK685_19735 PF17202 Single cache domain 3 LK685_19735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK685_19735 PF00672 HAMP domain LK685_19740 PF14040 Deoxyribonuclease NucA/NucB LK685_19745 PF11033 Competence protein J (ComJ) LK685_19750 PF00232 Glycosyl hydrolase family 1 LK685_19755 PF00005 ABC transporter LK685_19765 PF01047 MarR family LK685_19770 PF10925 Protein of unknown function (DUF2680) LK685_19775 PF06271 RDD family LK685_19785 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK685_19790 PF00528 Binding-protein-dependent transport system inner membrane component LK685_19795 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK685_19795 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK685_19810 PF02649 Type I GTP cyclohydrolase folE2 LK685_19815 PF07690 Major Facilitator Superfamily LK685_19820 PF04324 BFD-like [2Fe-2S] binding domain LK685_19820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LK685_19820 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_19820 PF18267 Rubredoxin NAD+ reductase C-terminal domain LK685_19825 PF00384 Molybdopterin oxidoreductase LK685_19825 PF01568 Molydopterin dinucleotide binding domain LK685_19825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK685_19830 PF04324 BFD-like [2Fe-2S] binding domain LK685_19830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LK685_19830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LK685_19830 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_19830 PF18267 Rubredoxin NAD+ reductase C-terminal domain LK685_19835 PF00355 Rieske [2Fe-2S] domain LK685_19840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK685_19845 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK685_19850 PF00561 alpha/beta hydrolase fold LK685_19855 PF03773 Predicted permease LK685_19860 PF09323 Domain of unknown function (DUF1980) LK685_19865 PF17853 GGDEF-like domain LK685_19865 PF13556 PucR C-terminal helix-turn-helix domain LK685_19870 PF00474 Sodium:solute symporter family LK685_19875 PF00171 Aldehyde dehydrogenase family LK685_19880 PF01619 Proline dehydrogenase LK685_19885 PF10127 RNA repair pathway DNA polymerase beta family LK685_19890 PF05448 Acetyl xylan esterase (AXE1) LK685_19895 PF03466 LysR substrate binding domain LK685_19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK685_19900 PF08241 Methyltransferase domain LK685_19905 PF01202 Shikimate kinase LK685_19915 PF02540 NAD synthase LK685_19920 PF09347 Domain of unknown function (DUF1989) LK685_19925 PF00324 Amino acid permease LK685_19930 PF08892 YqcI/YcgG family LK685_19935 PF01810 LysE type translocator LK685_19940 PF01047 MarR family LK685_19945 PF07690 Major Facilitator Superfamily LK685_19950 PF02652 L-lactate permease LK685_19955 PF00056 lactate/malate dehydrogenase, NAD binding domain LK685_19955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LK685_19960 PF00128 Alpha amylase, catalytic domain LK685_19960 PF16738 Starch-binding module 26 LK685_19970 PF03606 C4-dicarboxylate anaerobic carrier LK685_19975 PF07687 Peptidase dimerisation domain LK685_19975 PF01546 Peptidase family M20/M25/M40 LK685_19980 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LK685_19985 PF00528 Binding-protein-dependent transport system inner membrane component LK685_19990 PF00571 CBS domain LK685_19990 PF00005 ABC transporter LK685_20000 PF07690 Major Facilitator Superfamily LK685_20005 PF07690 Major Facilitator Superfamily LK685_20010 PF05816 Toxic anion resistance protein (TelA) LK685_20015 PF14266 Putative component of 'biosynthetic module' LK685_20020 PF03741 Integral membrane protein TerC family LK685_20025 PF02342 TerD domain LK685_20030 PF02342 TerD domain LK685_20035 PF02342 TerD domain LK685_20040 PF00296 Luciferase-like monooxygenase LK685_20045 PF00950 ABC 3 transport family LK685_20050 PF00005 ABC transporter LK685_20055 PF01297 Zinc-uptake complex component A periplasmic LK685_20060 PF00128 Alpha amylase, catalytic domain LK685_20070 PF18801 response regulator aspartate phosphatase H, N terminal LK685_20075 PF13539 D-alanyl-D-alanine carboxypeptidase LK685_20080 PF16244 Domain of unknown function (DUF4901) LK685_20085 PF16244 Domain of unknown function (DUF4901) LK685_20095 PF11611 Domain of unknown function (DUF4352) LK685_20095 PF17118 Domain of unknown function (DUF5105) LK685_20100 PF00248 Aldo/keto reductase family LK685_20105 PF12679 ABC-2 family transporter protein LK685_20110 PF00005 ABC transporter LK685_20115 PF04397 LytTr DNA-binding domain LK685_20115 PF00072 Response regulator receiver domain LK685_20120 PF14501 GHKL domain LK685_20125 PF05225 helix-turn-helix, Psq domain LK685_20125 PF02810 SEC-C motif LK685_20130 PF06271 RDD family LK685_20135 PF01674 Lipase (class 2) LK685_20140 PF17763 Glutaminase/Asparaginase C-terminal domain LK685_20140 PF00710 Asparaginase, N-terminal LK685_20145 PF00440 Bacterial regulatory proteins, tetR family LK685_20150 PF07690 Major Facilitator Superfamily LK685_20155 PF00266 Aminotransferase class-V LK685_20160 PF01470 Pyroglutamyl peptidase LK685_20165 PF00902 Sec-independent protein translocase protein (TatC) LK685_20170 PF02416 mttA/Hcf106 family LK685_20175 PF09423 PhoD-like phosphatase LK685_20175 PF16655 PhoD-like phosphatase, N-terminal domain LK685_20185 PF10138 vWA found in TerF C terminus LK685_20190 PF07486 Cell Wall Hydrolase LK685_20195 PF10710 Protein of unknown function (DUF2512) LK685_20210 PF00005 ABC transporter LK685_20215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_20215 PF00512 His Kinase A (phospho-acceptor) domain LK685_20220 PF00072 Response regulator receiver domain LK685_20220 PF00486 Transcriptional regulatory protein, C terminal LK685_20225 PF00892 EamA-like transporter family LK685_20230 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein LK685_20235 PF01636 Phosphotransferase enzyme family LK685_20240 PF08666 SAF domain LK685_20240 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LK685_20245 PF07729 FCD domain LK685_20245 PF00392 Bacterial regulatory proteins, gntR family LK685_20250 PF13378 Enolase C-terminal domain-like LK685_20255 PF07690 Major Facilitator Superfamily LK685_20260 PF00171 Aldehyde dehydrogenase family LK685_20265 PF00701 Dihydrodipicolinate synthetase family LK685_20270 PF08664 YcbB domain LK685_20270 PF00072 Response regulator receiver domain LK685_20275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK685_20280 PF04960 Glutaminase LK685_20285 PF01235 Sodium:alanine symporter family LK685_20290 PF02574 Homocysteine S-methyltransferase LK685_20295 PF00324 Amino acid permease LK685_20300 PF01063 Amino-transferase class IV LK685_20305 PF07853 Protein of unknown function (DUF1648) LK685_20310 PF07702 UTRA domain LK685_20310 PF00392 Bacterial regulatory proteins, gntR family LK685_20315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LK685_20320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LK685_20320 PF00367 phosphotransferase system, EIIB LK685_20320 PF02378 Phosphotransferase system, EIIC LK685_20325 PF00375 Sodium:dicarboxylate symporter family LK685_20330 PF12368 Rhodanase C-terminal LK685_20330 PF00581 Rhodanese-like domain LK685_20330 PF17773 UPF0176 acylphosphatase like domain LK685_20345 PF02666 Phosphatidylserine decarboxylase LK685_20350 PF09335 SNARE associated Golgi protein LK685_20355 PF01066 CDP-alcohol phosphatidyltransferase LK685_20360 PF12697 Alpha/beta hydrolase family LK685_20365 PF10794 Protein of unknown function (DUF2606) LK685_20370 PF00089 Trypsin LK685_20375 PF02222 ATP-grasp domain LK685_20380 PF02311 AraC-like ligand binding domain LK685_20380 PF12833 Helix-turn-helix domain LK685_20385 PF00892 EamA-like transporter family LK685_20390 PF08924 Domain of unknown function (DUF1906) LK685_20390 PF01471 Putative peptidoglycan binding domain LK685_20400 PF07690 Major Facilitator Superfamily LK685_20405 PF01047 MarR family LK685_20405 PF00583 Acetyltransferase (GNAT) family LK685_20410 PF10852 Protein of unknown function (DUF2651) LK685_20415 PF07690 Major Facilitator Superfamily LK685_20420 PF03009 Glycerophosphoryl diester phosphodiesterase family LK685_20425 PF00535 Glycosyl transferase family 2 LK685_20425 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LK685_20430 PF13520 Amino acid permease LK685_20440 PF00067 Cytochrome P450 LK685_20445 PF00905 Penicillin binding protein transpeptidase domain LK685_20450 PF17340 Family of unknown function (DUF5370) LK685_20455 PF17334 Minor curli fiber component A LK685_20460 PF00324 Amino acid permease LK685_20465 PF16226 Domain of unknown function (DUF4885) LK685_20475 PF00069 Protein kinase domain LK685_20485 PF00512 His Kinase A (phospho-acceptor) domain LK685_20485 PF00672 HAMP domain LK685_20490 PF00486 Transcriptional regulatory protein, C terminal LK685_20490 PF00072 Response regulator receiver domain LK685_20495 PF00561 alpha/beta hydrolase fold LK685_20510 PF07690 Major Facilitator Superfamily LK685_20520 PF10057 Uncharacterized conserved protein (DUF2294) LK685_20535 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LK685_20540 PF00361 Proton-conducting membrane transporter LK685_20540 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LK685_20545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LK685_20545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LK685_20550 PF02805 Metal binding domain of Ada LK685_20550 PF12833 Helix-turn-helix domain LK685_20555 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LK685_20555 PF00730 HhH-GPD superfamily base excision DNA repair protein LK685_20565 PF01380 SIS domain LK685_20570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK685_20570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK685_20570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK685_20570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK685_20575 PF07949 YbbR-like protein LK685_20580 PF02457 DisA bacterial checkpoint controller nucleotide-binding LK685_20585 PF13490 Putative zinc-finger LK685_20590 PF04542 Sigma-70 region 2 LK685_20590 PF08281 Sigma-70, region 4 LK685_20620 PF04463 Protein of unknown function (DUF523) LK685_20630 PF01380 SIS domain LK685_20635 PF01380 SIS domain LK685_20635 PF01418 Helix-turn-helix domain, rpiR family LK685_20640 PF00367 phosphotransferase system, EIIB LK685_20640 PF02378 Phosphotransferase system, EIIC LK685_20645 PF00144 Beta-lactamase LK685_20650 PF00933 Glycosyl hydrolase family 3 N terminal domain LK685_20650 PF01915 Glycosyl hydrolase family 3 C-terminal domain LK685_20655 PF07075 Protein of unknown function (DUF1343) LK685_20660 PF12833 Helix-turn-helix domain LK685_20660 PF01497 Periplasmic binding protein LK685_20665 PF01497 Periplasmic binding protein LK685_20670 PF01032 FecCD transport family LK685_20675 PF01032 FecCD transport family LK685_20680 PF00756 Putative esterase LK685_20685 PF01758 Sodium Bile acid symporter family LK685_20690 PF01740 STAS domain LK685_20690 PF00916 Sulfate permease family LK685_20775 PF01522 Polysaccharide deacetylase LK685_20780 PF14089 KinB-signalling pathway activation in sporulation LK685_20785 PF17898 Spore germination GerD central core domain LK685_20790 PF10609 NUBPL iron-transfer P-loop NTPase LK685_20795 PF01520 N-acetylmuramoyl-L-alanine amidase LK685_20800 PF10730 Protein of unknown function (DUF2521) LK685_20805 PF08241 Methyltransferase domain LK685_20810 PF00380 Ribosomal protein S9/S16 LK685_20815 PF00572 Ribosomal protein L13 LK685_20820 PF01416 tRNA pseudouridine synthase LK685_20825 PF02361 Cobalt transport protein LK685_20830 PF00005 ABC transporter LK685_20835 PF00005 ABC transporter LK685_20840 PF01196 Ribosomal protein L17 LK685_20845 PF01000 RNA polymerase Rpb3/RpoA insert domain LK685_20845 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LK685_20845 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LK685_20850 PF00411 Ribosomal protein S11 LK685_20855 PF00416 Ribosomal protein S13/S18 LK685_20860 PF00444 Ribosomal protein L36 LK685_20865 PF01176 Translation initiation factor 1A / IF-1 LK685_20875 PF00557 Metallopeptidase family M24 LK685_20880 PF05191 Adenylate kinase, active site lid LK685_20885 PF00344 SecY translocase LK685_20890 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LK685_20895 PF00327 Ribosomal protein L30p/L7e LK685_20900 PF00333 Ribosomal protein S5, N-terminal domain LK685_20900 PF03719 Ribosomal protein S5, C-terminal domain LK685_20905 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LK685_20910 PF00347 Ribosomal protein L6 LK685_20915 PF00410 Ribosomal protein S8 LK685_20920 PF00253 Ribosomal protein S14p/S29e LK685_20925 PF00281 Ribosomal protein L5 LK685_20925 PF00673 ribosomal L5P family C-terminus LK685_20930 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LK685_20930 PF00467 KOW motif LK685_20935 PF00238 Ribosomal protein L14p/L23e LK685_20940 PF00366 Ribosomal protein S17 LK685_20945 PF00831 Ribosomal L29 protein LK685_20950 PF00252 Ribosomal protein L16p/L10e LK685_20955 PF07650 KH domain LK685_20955 PF00189 Ribosomal protein S3, C-terminal domain LK685_20960 PF00237 Ribosomal protein L22p/L17e LK685_20965 PF00203 Ribosomal protein S19 LK685_20970 PF00181 Ribosomal Proteins L2, RNA binding domain LK685_20970 PF03947 Ribosomal Proteins L2, C-terminal domain LK685_20975 PF00276 Ribosomal protein L23 LK685_20980 PF00573 Ribosomal protein L4/L1 family LK685_20985 PF00297 Ribosomal protein L3 LK685_20990 PF00338 Ribosomal protein S10p/S20e LK685_20995 PF12146 Serine aminopeptidase, S33 LK685_21000 PF00009 Elongation factor Tu GTP binding domain LK685_21000 PF03144 Elongation factor Tu domain 2 LK685_21000 PF03143 Elongation factor Tu C-terminal domain LK685_21005 PF03144 Elongation factor Tu domain 2 LK685_21005 PF00679 Elongation factor G C-terminus LK685_21005 PF14492 Elongation Factor G, domain II LK685_21005 PF03764 Elongation factor G, domain IV LK685_21005 PF00009 Elongation factor Tu GTP binding domain LK685_21010 PF00177 Ribosomal protein S7p/S5e LK685_21015 PF00164 Ribosomal protein S12/S23 LK685_21020 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LK685_21025 PF04998 RNA polymerase Rpb1, domain 5 LK685_21025 PF05000 RNA polymerase Rpb1, domain 4 LK685_21025 PF04983 RNA polymerase Rpb1, domain 3 LK685_21025 PF04997 RNA polymerase Rpb1, domain 1 LK685_21025 PF00623 RNA polymerase Rpb1, domain 2 LK685_21030 PF04563 RNA polymerase beta subunit LK685_21030 PF04561 RNA polymerase Rpb2, domain 2 LK685_21030 PF04565 RNA polymerase Rpb2, domain 3 LK685_21030 PF10385 RNA polymerase beta subunit external 1 domain LK685_21030 PF00562 RNA polymerase Rpb2, domain 6 LK685_21030 PF04560 RNA polymerase Rpb2, domain 7 LK685_21035 PF05175 Methyltransferase small domain LK685_21040 PF00542 Ribosomal protein L7/L12 C-terminal domain LK685_21040 PF16320 Ribosomal protein L7/L12 dimerisation domain LK685_21045 PF00466 Ribosomal protein L10 LK685_21050 PF00687 Ribosomal protein L1p/L10e family LK685_21055 PF00298 Ribosomal protein L11, RNA binding domain LK685_21055 PF03946 Ribosomal protein L11, N-terminal domain LK685_21060 PF00467 KOW motif LK685_21060 PF02357 Transcription termination factor nusG LK685_21065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LK685_21070 PF00471 Ribosomal protein L33 LK685_21075 PF08281 Sigma-70, region 4 LK685_21075 PF04542 Sigma-70 region 2 LK685_21080 PF05991 YacP-like NYN domain LK685_21085 PF08032 RNA 2'-O ribose methyltransferase substrate binding LK685_21085 PF00588 SpoU rRNA Methylase family LK685_21090 PF00636 Ribonuclease III domain LK685_21095 PF09190 DALR domain LK685_21095 PF01406 tRNA synthetases class I (C) catalytic domain LK685_21100 PF00132 Bacterial transferase hexapeptide (six repeats) LK685_21100 PF06426 Serine acetyltransferase, N-terminal LK685_21105 PF00749 tRNA synthetases class I (E and Q), catalytic domain LK685_21110 PF02542 YgbB family LK685_21115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LK685_21125 PF10635 DisA bacterial checkpoint controller linker region LK685_21125 PF02457 DisA bacterial checkpoint controller nucleotide-binding LK685_21130 PF18073 Rubredoxin metal binding domain LK685_21135 PF10431 C-terminal, D2-small domain, of ClpB protein LK685_21135 PF00004 ATPase family associated with various cellular activities (AAA) LK685_21135 PF07724 AAA domain (Cdc48 subfamily) LK685_21135 PF17871 AAA lid domain LK685_21135 PF02861 Clp amino terminal domain, pathogenicity island component LK685_21140 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LK685_21145 PF02151 UvrB/uvrC motif LK685_21150 PF17727 CtsR C-terminal dimerization domain LK685_21150 PF05848 CtsR N-terminal HTH domain LK685_21230 PF01336 OB-fold nucleic acid binding domain LK685_21230 PF00152 tRNA synthetases class II (D, K and N) LK685_21235 PF01207 Dihydrouridine synthase (Dus) LK685_21240 PF01381 Helix-turn-helix LK685_21245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LK685_21250 PF02152 Dihydroneopterin aldolase LK685_21255 PF00809 Pterin binding enzyme LK685_21260 PF01063 Amino-transferase class IV LK685_21265 PF00117 Glutamine amidotransferase class-I LK685_21270 PF04715 Anthranilate synthase component I, N terminal region LK685_21270 PF00425 chorismate binding enzyme LK685_21275 PF00291 Pyridoxal-phosphate dependent enzyme LK685_21280 PF13145 PPIC-type PPIASE domain LK685_21285 PF01430 Hsp33 protein LK685_21290 PF03309 Type III pantothenate kinase LK685_21295 PF17862 AAA+ lid domain LK685_21295 PF01434 Peptidase family M41 LK685_21295 PF06480 FtsH Extracellular LK685_21295 PF00004 ATPase family associated with various cellular activities (AAA) LK685_21300 PF00156 Phosphoribosyl transferase domain LK685_21305 PF01171 PP-loop family LK685_21305 PF09179 TilS substrate binding domain LK685_21305 PF11734 TilS substrate C-terminal domain LK685_21310 PF00069 Protein kinase domain LK685_21315 PF00092 von Willebrand factor type A domain LK685_21320 PF07228 Stage II sporulation protein E (SpoIIE) LK685_21335 PF00575 S1 RNA binding domain LK685_21340 PF04977 Septum formation initiator LK685_21345 PF09578 Spore cortex protein YabQ (Spore_YabQ) LK685_21350 PF07873 YabP family LK685_21355 PF01479 S4 domain LK685_21360 PF03819 MazG nucleotide pyrophosphohydrolase domain LK685_21360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK685_21365 PF01943 Polysaccharide biosynthesis protein LK685_21365 PF14667 Polysaccharide biosynthesis C-terminal domain LK685_21370 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LK685_21370 PF15714 Stage V sporulation protein T C-terminal, transcription factor LK685_21375 PF00271 Helicase conserved C-terminal domain LK685_21375 PF17757 UvrB interaction domain LK685_21375 PF03461 TRCF domain LK685_21375 PF00270 DEAD/DEAH box helicase LK685_21375 PF02559 CarD-like/TRCF domain LK685_21380 PF10955 Protein of unknown function (DUF2757) LK685_21385 PF01195 Peptidyl-tRNA hydrolase LK685_21390 PF01386 Ribosomal L25p family LK685_21390 PF14693 Ribosomal protein TL5, C-terminal domain LK685_21395 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LK685_21395 PF14572 Phosphoribosyl synthetase-associated domain LK685_21400 PF00483 Nucleotidyl transferase LK685_21400 PF00132 Bacterial transferase hexapeptide (six repeats) LK685_21405 PF04026 SpoVG LK685_21410 PF01042 Endoribonuclease L-PSP LK685_21415 PF09182 Bacterial purine repressor, N-terminal LK685_21415 PF00156 Phosphoribosyl transferase domain LK685_21420 PF00288 GHMP kinases N terminal domain LK685_21420 PF08544 GHMP kinases C terminal LK685_21425 PF00269 Small, acid-soluble spore proteins, alpha/beta type LK685_21430 PF06257 Biofilm formation stimulator VEG LK685_21435 PF05582 YabG peptidase U57 LK685_21440 PF00398 Ribosomal RNA adenine dimethylase LK685_21445 PF13331 Domain of unknown function (DUF4093) LK685_21445 PF13662 Toprim domain LK685_21450 PF07501 G5 domain LK685_21450 PF06725 3D domain LK685_21450 PF03990 G5-linked-Ubiquitin-like domain LK685_21455 PF01026 TatD related DNase LK685_21460 PF08264 Anticodon-binding domain of tRNA LK685_21460 PF09334 tRNA synthetases class I (M) LK685_21460 PF01588 Putative tRNA binding domain LK685_21465 PF18277 AbrB C-terminal domain LK685_21465 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LK685_21470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK685_21475 PF01541 GIY-YIG catalytic domain LK685_21480 PF05175 Methyltransferase small domain LK685_21485 PF06156 Initiation control protein YabA LK685_21490 PF04468 PSP1 C-terminal conserved region LK685_21495 PF09115 DNA polymerase III, delta subunit, C terminal LK685_21500 PF03885 Protein of unknown function (DUF327) LK685_21505 PF06153 Cyclic-di-AMP receptor LK685_21510 PF02223 Thymidylate kinase LK685_21515 PF01276 Orn/Lys/Arg decarboxylase, major domain LK685_21515 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LK685_21520 PF05816 Toxic anion resistance protein (TelA) LK685_21525 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein LK685_21530 PF10764 Inhibitor of sigma-G Gin LK685_21560 PF07441 SigmaK-factor processing regulatory protein BofA LK685_21565 PF10704 Protein of unknown function (DUF2508) LK685_21570 PF02132 RecR protein LK685_21570 PF13662 Toprim domain LK685_21575 PF02575 YbaB/EbfC DNA-binding family LK685_21580 PF12169 DNA polymerase III subunits gamma and tau domain III LK685_21590 PF14437 MafB19-like deaminase LK685_21595 PF00857 Isochorismatase family LK685_21600 PF00704 Glycosyl hydrolases family 18 LK685_21600 PF01476 LysM domain LK685_21605 PF01712 Deoxynucleoside kinase LK685_21610 PF01712 Deoxynucleoside kinase LK685_21620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK685_21620 PF02403 Seryl-tRNA synthetase N-terminal domain LK685_21625 PF01174 SNO glutamine amidotransferase family LK685_21630 PF01680 SOR/SNZ family LK685_21635 PF00768 D-alanyl-D-alanine carboxypeptidase LK685_21635 PF07943 Penicillin-binding protein 5, C-terminal domain LK685_21640 PF00478 IMP dehydrogenase / GMP reductase domain LK685_21640 PF00571 CBS domain LK685_21645 PF14175 YaaC-like Protein LK685_21675 PF00521 DNA gyrase/topoisomerase IV, subunit A LK685_21675 PF03989 DNA gyrase C-terminal domain, beta-propeller LK685_21730 PF00877 NlpC/P60 family LK685_21760 PF18801 response regulator aspartate phosphatase H, N terminal LK685_21790 PF00565 Staphylococcal nuclease homologue