locus-tag class description LIT32_00005 PF00308 Bacterial dnaA protein LIT32_00005 PF08299 Bacterial dnaA protein helix-turn-helix LIT32_00005 PF11638 DnaA N-terminal domain LIT32_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LIT32_00010 PF02767 DNA polymerase III beta subunit, central domain LIT32_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LIT32_00020 PF02463 RecF/RecN/SMC N terminal domain LIT32_00025 PF04025 Domain of unknown function (DUF370) LIT32_00030 PF01751 Toprim domain LIT32_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_00030 PF00204 DNA gyrase B LIT32_00030 PF00986 DNA gyrase B subunit, carboxyl terminus LIT32_00045 PF03989 DNA gyrase C-terminal domain, beta-propeller LIT32_00045 PF00521 DNA gyrase/topoisomerase IV, subunit A LIT32_00050 PF01966 HD domain LIT32_00080 PF14175 YaaC-like Protein LIT32_00085 PF00571 CBS domain LIT32_00085 PF00478 IMP dehydrogenase / GMP reductase domain LIT32_00090 PF00768 D-alanyl-D-alanine carboxypeptidase LIT32_00090 PF07943 Penicillin-binding protein 5, C-terminal domain LIT32_00095 PF01680 SOR/SNZ family LIT32_00100 PF01174 SNO glutamine amidotransferase family LIT32_00105 PF02403 Seryl-tRNA synthetase N-terminal domain LIT32_00105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT32_00115 PF01712 Deoxynucleoside kinase LIT32_00120 PF01712 Deoxynucleoside kinase LIT32_00125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_00130 PF01613 Flavin reductase like domain LIT32_00135 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT32_00145 PF00704 Glycosyl hydrolases family 18 LIT32_00145 PF01476 LysM domain LIT32_00150 PF00857 Isochorismatase family LIT32_00155 PF14437 MafB19-like deaminase LIT32_00165 PF12169 DNA polymerase III subunits gamma and tau domain III LIT32_00170 PF02575 YbaB/EbfC DNA-binding family LIT32_00175 PF02132 RecR protein LIT32_00175 PF13662 Toprim domain LIT32_00180 PF10704 Protein of unknown function (DUF2508) LIT32_00185 PF07441 SigmaK-factor processing regulatory protein BofA LIT32_00215 PF10764 Inhibitor of sigma-G Gin LIT32_00220 PF01276 Orn/Lys/Arg decarboxylase, major domain LIT32_00220 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LIT32_00225 PF02223 Thymidylate kinase LIT32_00230 PF06153 Cyclic-di-AMP receptor LIT32_00235 PF03885 Protein of unknown function (DUF327) LIT32_00240 PF09115 DNA polymerase III, delta subunit, C terminal LIT32_00245 PF04468 PSP1 C-terminal conserved region LIT32_00250 PF06156 Initiation control protein YabA LIT32_00255 PF05175 Methyltransferase small domain LIT32_00260 PF01541 GIY-YIG catalytic domain LIT32_00265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_00270 PF18277 AbrB C-terminal domain LIT32_00270 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIT32_00275 PF09334 tRNA synthetases class I (M) LIT32_00275 PF08264 Anticodon-binding domain of tRNA LIT32_00275 PF01588 Putative tRNA binding domain LIT32_00280 PF01026 TatD related DNase LIT32_00285 PF03990 G5-linked-Ubiquitin-like domain LIT32_00285 PF06725 3D domain LIT32_00285 PF07501 G5 domain LIT32_00290 PF13331 Domain of unknown function (DUF4093) LIT32_00290 PF13662 Toprim domain LIT32_00295 PF00398 Ribosomal RNA adenine dimethylase LIT32_00300 PF05582 YabG peptidase U57 LIT32_00305 PF06257 Biofilm formation stimulator VEG LIT32_00310 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT32_00315 PF08544 GHMP kinases C terminal LIT32_00315 PF00288 GHMP kinases N terminal domain LIT32_00320 PF00156 Phosphoribosyl transferase domain LIT32_00320 PF09182 Bacterial purine repressor, N-terminal LIT32_00325 PF01042 Endoribonuclease L-PSP LIT32_00330 PF04026 SpoVG LIT32_00335 PF00483 Nucleotidyl transferase LIT32_00335 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_00340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LIT32_00340 PF14572 Phosphoribosyl synthetase-associated domain LIT32_00345 PF14693 Ribosomal protein TL5, C-terminal domain LIT32_00345 PF01386 Ribosomal L25p family LIT32_00350 PF01195 Peptidyl-tRNA hydrolase LIT32_00355 PF10955 Protein of unknown function (DUF2757) LIT32_00360 PF02559 CarD-like/TRCF domain LIT32_00360 PF00270 DEAD/DEAH box helicase LIT32_00360 PF00271 Helicase conserved C-terminal domain LIT32_00360 PF17757 UvrB interaction domain LIT32_00360 PF03461 TRCF domain LIT32_00365 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIT32_00365 PF15714 Stage V sporulation protein T C-terminal, transcription factor LIT32_00370 PF01943 Polysaccharide biosynthesis protein LIT32_00370 PF14667 Polysaccharide biosynthesis C-terminal domain LIT32_00375 PF03819 MazG nucleotide pyrophosphohydrolase domain LIT32_00375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_00380 PF01479 S4 domain LIT32_00385 PF07873 YabP family LIT32_00390 PF09578 Spore cortex protein YabQ (Spore_YabQ) LIT32_00395 PF04977 Septum formation initiator LIT32_00400 PF00575 S1 RNA binding domain LIT32_00415 PF07228 Stage II sporulation protein E (SpoIIE) LIT32_00420 PF00092 von Willebrand factor type A domain LIT32_00425 PF00069 Protein kinase domain LIT32_00430 PF09179 TilS substrate binding domain LIT32_00430 PF01171 PP-loop family LIT32_00430 PF11734 TilS substrate C-terminal domain LIT32_00435 PF00156 Phosphoribosyl transferase domain LIT32_00440 PF06480 FtsH Extracellular LIT32_00440 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_00440 PF17862 AAA+ lid domain LIT32_00440 PF01434 Peptidase family M41 LIT32_00445 PF03309 Type III pantothenate kinase LIT32_00450 PF01430 Hsp33 protein LIT32_00455 PF13145 PPIC-type PPIASE domain LIT32_00460 PF00291 Pyridoxal-phosphate dependent enzyme LIT32_00465 PF00425 chorismate binding enzyme LIT32_00465 PF04715 Anthranilate synthase component I, N terminal region LIT32_00470 PF00117 Glutamine amidotransferase class-I LIT32_00475 PF01063 Amino-transferase class IV LIT32_00480 PF00809 Pterin binding enzyme LIT32_00485 PF02152 Dihydroneopterin aldolase LIT32_00490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LIT32_00495 PF01381 Helix-turn-helix LIT32_00500 PF01207 Dihydrouridine synthase (Dus) LIT32_00505 PF00152 tRNA synthetases class II (D, K and N) LIT32_00505 PF01336 OB-fold nucleic acid binding domain LIT32_00585 PF05848 CtsR N-terminal HTH domain LIT32_00585 PF17727 CtsR C-terminal dimerization domain LIT32_00590 PF02151 UvrB/uvrC motif LIT32_00595 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LIT32_00600 PF07724 AAA domain (Cdc48 subfamily) LIT32_00600 PF17871 AAA lid domain LIT32_00600 PF02861 Clp amino terminal domain, pathogenicity island component LIT32_00600 PF10431 C-terminal, D2-small domain, of ClpB protein LIT32_00600 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_00605 PF18073 Rubredoxin metal binding domain LIT32_00610 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIT32_00610 PF10635 DisA bacterial checkpoint controller linker region LIT32_00620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LIT32_00625 PF02542 YgbB family LIT32_00630 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIT32_00635 PF06426 Serine acetyltransferase, N-terminal LIT32_00635 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_00640 PF09190 DALR domain LIT32_00640 PF01406 tRNA synthetases class I (C) catalytic domain LIT32_00645 PF00636 Ribonuclease III domain LIT32_00650 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIT32_00650 PF00588 SpoU rRNA Methylase family LIT32_00655 PF05991 YacP-like NYN domain LIT32_00660 PF04542 Sigma-70 region 2 LIT32_00660 PF08281 Sigma-70, region 4 LIT32_00665 PF00471 Ribosomal protein L33 LIT32_00670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LIT32_00675 PF00467 KOW motif LIT32_00675 PF02357 Transcription termination factor nusG LIT32_00680 PF00298 Ribosomal protein L11, RNA binding domain LIT32_00680 PF03946 Ribosomal protein L11, N-terminal domain LIT32_00685 PF00687 Ribosomal protein L1p/L10e family LIT32_00690 PF00466 Ribosomal protein L10 LIT32_00695 PF00542 Ribosomal protein L7/L12 C-terminal domain LIT32_00695 PF16320 Ribosomal protein L7/L12 dimerisation domain LIT32_00700 PF05175 Methyltransferase small domain LIT32_00705 PF04563 RNA polymerase beta subunit LIT32_00705 PF04561 RNA polymerase Rpb2, domain 2 LIT32_00705 PF04565 RNA polymerase Rpb2, domain 3 LIT32_00705 PF00562 RNA polymerase Rpb2, domain 6 LIT32_00705 PF10385 RNA polymerase beta subunit external 1 domain LIT32_00705 PF04560 RNA polymerase Rpb2, domain 7 LIT32_00710 PF04997 RNA polymerase Rpb1, domain 1 LIT32_00710 PF04998 RNA polymerase Rpb1, domain 5 LIT32_00710 PF05000 RNA polymerase Rpb1, domain 4 LIT32_00710 PF00623 RNA polymerase Rpb1, domain 2 LIT32_00710 PF04983 RNA polymerase Rpb1, domain 3 LIT32_00715 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LIT32_00720 PF00164 Ribosomal protein S12/S23 LIT32_00725 PF00177 Ribosomal protein S7p/S5e LIT32_00730 PF14492 Elongation Factor G, domain II LIT32_00730 PF03764 Elongation factor G, domain IV LIT32_00730 PF03144 Elongation factor Tu domain 2 LIT32_00730 PF00679 Elongation factor G C-terminus LIT32_00730 PF00009 Elongation factor Tu GTP binding domain LIT32_00735 PF03143 Elongation factor Tu C-terminal domain LIT32_00735 PF03144 Elongation factor Tu domain 2 LIT32_00735 PF00009 Elongation factor Tu GTP binding domain LIT32_00740 PF00338 Ribosomal protein S10p/S20e LIT32_00745 PF00297 Ribosomal protein L3 LIT32_00750 PF00573 Ribosomal protein L4/L1 family LIT32_00755 PF00276 Ribosomal protein L23 LIT32_00760 PF03947 Ribosomal Proteins L2, C-terminal domain LIT32_00760 PF00181 Ribosomal Proteins L2, RNA binding domain LIT32_00765 PF00203 Ribosomal protein S19 LIT32_00770 PF00237 Ribosomal protein L22p/L17e LIT32_00775 PF07650 KH domain LIT32_00775 PF00189 Ribosomal protein S3, C-terminal domain LIT32_00780 PF00252 Ribosomal protein L16p/L10e LIT32_00785 PF00831 Ribosomal L29 protein LIT32_00790 PF00366 Ribosomal protein S17 LIT32_00795 PF00238 Ribosomal protein L14p/L23e LIT32_00800 PF00467 KOW motif LIT32_00800 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LIT32_00805 PF00281 Ribosomal protein L5 LIT32_00805 PF00673 ribosomal L5P family C-terminus LIT32_00810 PF00253 Ribosomal protein S14p/S29e LIT32_00815 PF00410 Ribosomal protein S8 LIT32_00820 PF00347 Ribosomal protein L6 LIT32_00825 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LIT32_00830 PF00333 Ribosomal protein S5, N-terminal domain LIT32_00830 PF03719 Ribosomal protein S5, C-terminal domain LIT32_00835 PF00327 Ribosomal protein L30p/L7e LIT32_00840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LIT32_00845 PF00344 SecY translocase LIT32_00850 PF05191 Adenylate kinase, active site lid LIT32_00855 PF00557 Metallopeptidase family M24 LIT32_00865 PF01176 Translation initiation factor 1A / IF-1 LIT32_00870 PF00444 Ribosomal protein L36 LIT32_00875 PF00416 Ribosomal protein S13/S18 LIT32_00880 PF00411 Ribosomal protein S11 LIT32_00885 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LIT32_00885 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LIT32_00885 PF01000 RNA polymerase Rpb3/RpoA insert domain LIT32_00890 PF01196 Ribosomal protein L17 LIT32_00895 PF00005 ABC transporter LIT32_00900 PF00005 ABC transporter LIT32_00905 PF02361 Cobalt transport protein LIT32_00910 PF01416 tRNA pseudouridine synthase LIT32_00915 PF00572 Ribosomal protein L13 LIT32_00920 PF00380 Ribosomal protein S9/S16 LIT32_00930 PF01476 LysM domain LIT32_00930 PF00877 NlpC/P60 family LIT32_00930 PF08239 Bacterial SH3 domain LIT32_00940 PF10730 Protein of unknown function (DUF2521) LIT32_00945 PF01520 N-acetylmuramoyl-L-alanine amidase LIT32_00950 PF10609 NUBPL iron-transfer P-loop NTPase LIT32_00955 PF17898 Spore germination GerD central core domain LIT32_00960 PF14089 KinB-signalling pathway activation in sporulation LIT32_00965 PF01522 Polysaccharide deacetylase LIT32_01040 PF00491 Arginase family LIT32_01045 PF04542 Sigma-70 region 2 LIT32_01045 PF08281 Sigma-70, region 4 LIT32_01050 PF13490 Putative zinc-finger LIT32_01055 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIT32_01060 PF07949 YbbR-like protein LIT32_01065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIT32_01065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIT32_01065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIT32_01065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIT32_01070 PF01380 SIS domain LIT32_01080 PF06441 Epoxide hydrolase N terminus LIT32_01085 PF00478 IMP dehydrogenase / GMP reductase domain LIT32_01090 PF00188 Cysteine-rich secretory protein family LIT32_01095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIT32_01095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIT32_01100 PF01594 AI-2E family transporter LIT32_01105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LIT32_01115 PF00571 CBS domain LIT32_01115 PF00005 ABC transporter LIT32_01120 PF02566 OsmC-like protein LIT32_01140 PF03551 Transcriptional regulator PadR-like family LIT32_01145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_01150 PF01613 Flavin reductase like domain LIT32_01155 PF00583 Acetyltransferase (GNAT) family LIT32_01155 PF00814 Glycoprotease family LIT32_01160 PF02378 Phosphotransferase system, EIIC LIT32_01160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_01165 PF08279 HTH domain LIT32_01165 PF00874 PRD domain LIT32_01165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_01165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_01165 PF05043 Mga helix-turn-helix domain LIT32_01170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_01175 PF08125 Mannitol dehydrogenase C-terminal domain LIT32_01175 PF01232 Mannitol dehydrogenase Rossmann domain LIT32_01190 PF01434 Peptidase family M41 LIT32_01190 PF17862 AAA+ lid domain LIT32_01190 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_01190 PF06480 FtsH Extracellular LIT32_01195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_01200 PF00664 ABC transporter transmembrane region LIT32_01200 PF00005 ABC transporter LIT32_01205 PF08892 YqcI/YcgG family LIT32_01215 PF13649 Methyltransferase domain LIT32_01225 PF00171 Aldehyde dehydrogenase family LIT32_01230 PF00005 ABC transporter LIT32_01240 PF00440 Bacterial regulatory proteins, tetR family LIT32_01250 PF00440 Bacterial regulatory proteins, tetR family LIT32_01250 PF17922 Tetracyclin repressor-like, C-terminal domain LIT32_01270 PF00392 Bacterial regulatory proteins, gntR family LIT32_01270 PF00155 Aminotransferase class I and II LIT32_01275 PF00005 ABC transporter LIT32_01285 PF01594 AI-2E family transporter LIT32_01290 PF09335 SNARE associated Golgi protein LIT32_01300 PF00296 Luciferase-like monooxygenase LIT32_01305 PF00085 Thioredoxin LIT32_01310 PF07478 D-ala D-ala ligase C-terminus LIT32_01310 PF01820 D-ala D-ala ligase N-terminus LIT32_01315 PF08245 Mur ligase middle domain LIT32_01315 PF02875 Mur ligase family, glutamate ligase domain LIT32_01315 PF01225 Mur ligase family, catalytic domain LIT32_01325 PF00561 alpha/beta hydrolase fold LIT32_01335 PF03851 UV-endonuclease UvdE LIT32_01340 PF03703 Bacterial PH domain LIT32_01345 PF03703 Bacterial PH domain LIT32_01350 PF01694 Rhomboid family LIT32_01355 PF01648 4'-phosphopantetheinyl transferase superfamily LIT32_01365 PF00842 Alanine racemase, C-terminal domain LIT32_01365 PF01168 Alanine racemase, N-terminal domain LIT32_01370 PF01402 Ribbon-helix-helix protein, copG family LIT32_01375 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LIT32_01380 PF08678 Rsbr N terminal LIT32_01380 PF01740 STAS domain LIT32_01385 PF01740 STAS domain LIT32_01390 PF13581 Histidine kinase-like ATPase domain LIT32_01395 PF07228 Stage II sporulation protein E (SpoIIE) LIT32_01395 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain LIT32_01400 PF01740 STAS domain LIT32_01405 PF13581 Histidine kinase-like ATPase domain LIT32_01410 PF04542 Sigma-70 region 2 LIT32_01410 PF04539 Sigma-70 region 3 LIT32_01410 PF04545 Sigma-70, region 4 LIT32_01415 PF07228 Stage II sporulation protein E (SpoIIE) LIT32_01420 PF17674 HHH domain LIT32_01420 PF00575 S1 RNA binding domain LIT32_01420 PF09371 Tex-like protein N-terminal domain LIT32_01420 PF16921 Tex protein YqgF-like domain LIT32_01430 PF10263 SprT-like family LIT32_01520 PF00586 AIR synthase related protein, N-terminal domain LIT32_01520 PF02769 AIR synthase related protein, C-terminal domain LIT32_01525 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LIT32_01530 PF00814 Glycoprotease family LIT32_01535 PF00583 Acetyltransferase (GNAT) family LIT32_01540 PF00814 Glycoprotease family LIT32_01545 PF00005 ABC transporter LIT32_01545 PF16326 ABC transporter C-terminal domain LIT32_01545 PF12848 ABC transporter LIT32_01550 PF01967 MoaC family LIT32_01555 PF06971 Putative DNA-binding protein N-terminus LIT32_01555 PF02629 CoA binding domain LIT32_01560 PF02416 mttA/Hcf106 family LIT32_01565 PF00902 Sec-independent protein translocase protein (TatC) LIT32_01575 PF02517 CPBP intramembrane metalloprotease LIT32_01580 PF00166 Chaperonin 10 Kd subunit LIT32_01585 PF00118 TCP-1/cpn60 chaperonin family LIT32_01605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_01605 PF02378 Phosphotransferase system, EIIC LIT32_01605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_01610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_01615 PF07748 Glycosyl hydrolases family 38 C-terminal domain LIT32_01615 PF01074 Glycosyl hydrolases family 38 N-terminal domain LIT32_01615 PF09261 Alpha mannosidase middle domain LIT32_01625 PF00874 PRD domain LIT32_01625 PF08279 HTH domain LIT32_01625 PF05043 Mga helix-turn-helix domain LIT32_01625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_01655 PF13152 Protein of unknown function (DUF3967) LIT32_01655 PF13411 MerR HTH family regulatory protein LIT32_01660 PF08244 Glycosyl hydrolases family 32 C terminal LIT32_01660 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIT32_01665 PF02435 Levansucrase/Invertase LIT32_01680 PF01547 Bacterial extracellular solute-binding protein LIT32_01685 PF00072 Response regulator receiver domain LIT32_01685 PF12833 Helix-turn-helix domain LIT32_01690 PF02743 Cache domain LIT32_01690 PF00672 HAMP domain LIT32_01690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_01690 PF06580 Histidine kinase LIT32_01695 PF01032 FecCD transport family LIT32_01700 PF01032 FecCD transport family LIT32_01705 PF01497 Periplasmic binding protein LIT32_01710 PF00005 ABC transporter LIT32_01715 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_01725 PF07726 ATPase family associated with various cellular activities (AAA) LIT32_01725 PF17863 AAA lid domain LIT32_01730 PF01882 Protein of unknown function DUF58 LIT32_01735 PF01841 Transglutaminase-like superfamily LIT32_01735 PF13559 Domain of unknown function (DUF4129) LIT32_01735 PF11992 Domain of unknown function (DUF3488) LIT32_01740 PF02540 NAD synthase LIT32_01740 PF00958 GMP synthase C terminal domain LIT32_01740 PF00117 Glutamine amidotransferase class-I LIT32_01745 PF00860 Permease family LIT32_01795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_01800 PF14044 NETI protein LIT32_01805 PF00731 AIR carboxylase LIT32_01810 PF02222 ATP-grasp domain LIT32_01810 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LIT32_01815 PF10397 Adenylosuccinate lyase C-terminus LIT32_01815 PF00206 Lyase LIT32_01820 PF01259 SAICAR synthetase LIT32_01825 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LIT32_01835 PF00586 AIR synthase related protein, N-terminal domain LIT32_01835 PF02769 AIR synthase related protein, C-terminal domain LIT32_01835 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LIT32_01840 PF00156 Phosphoribosyl transferase domain LIT32_01845 PF00586 AIR synthase related protein, N-terminal domain LIT32_01845 PF02769 AIR synthase related protein, C-terminal domain LIT32_01850 PF00551 Formyl transferase LIT32_01855 PF02142 MGS-like domain LIT32_01855 PF01808 AICARFT/IMPCHase bienzyme LIT32_01860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LIT32_01860 PF02843 Phosphoribosylglycinamide synthetase, C domain LIT32_01860 PF02844 Phosphoribosylglycinamide synthetase, N domain LIT32_01865 PF11127 Protein of unknown function (DUF2892) LIT32_01870 PF13382 Adenine deaminase C-terminal domain LIT32_01870 PF01979 Amidohydrolase family LIT32_01875 PF11258 Protein of unknown function (DUF3048) N-terminal domain LIT32_01875 PF17479 Protein of unknown function (DUF3048) C-terminal domain LIT32_01880 PF01371 Trp repressor protein LIT32_01890 PF01884 PcrB family LIT32_01895 PF00580 UvrD/REP helicase N-terminal domain LIT32_01895 PF13361 UvrD-like helicase C-terminal domain LIT32_01900 PF00533 BRCA1 C Terminus (BRCT) domain LIT32_01900 PF01653 NAD-dependent DNA ligase adenylation domain LIT32_01900 PF03120 NAD-dependent DNA ligase OB-fold domain LIT32_01900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LIT32_01900 PF12826 Helix-hairpin-helix motif LIT32_01905 PF07537 CamS sex pheromone cAM373 precursor LIT32_01910 PF00171 Aldehyde dehydrogenase family LIT32_01915 PF00474 Sodium:solute symporter family LIT32_01920 PF00011 Hsp20/alpha crystallin family LIT32_01925 PF13416 Bacterial extracellular solute-binding protein LIT32_01930 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_01935 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_01940 PF01301 Glycosyl hydrolases family 35 LIT32_01945 PF16874 Glycosyl hydrolase family 36 C-terminal domain LIT32_01945 PF16875 Glycosyl hydrolase family 36 N-terminal domain LIT32_01950 PF08533 Beta-galactosidase C-terminal domain LIT32_01950 PF08532 Beta-galactosidase trimerisation domain LIT32_01950 PF02449 Beta-galactosidase LIT32_01955 PF10509 Galactokinase galactose-binding signature LIT32_01955 PF08544 GHMP kinases C terminal LIT32_01955 PF00288 GHMP kinases N terminal domain LIT32_01960 PF16363 GDP-mannose 4,6 dehydratase LIT32_01965 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LIT32_01965 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LIT32_01970 PF01263 Aldose 1-epimerase LIT32_01975 PF00356 Bacterial regulatory proteins, lacI family LIT32_01985 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_01990 PF02686 Glu-tRNAGln amidotransferase C subunit LIT32_01995 PF01425 Amidase LIT32_02000 PF02934 GatB/GatE catalytic domain LIT32_02000 PF02637 GatB domain LIT32_02005 PF00781 Diacylglycerol kinase catalytic domain LIT32_02010 PF01938 TRAM domain LIT32_02010 PF05958 tRNA (Uracil-5-)-methyltransferase LIT32_02015 PF05067 Manganese containing catalase LIT32_02025 PF07883 Cupin domain LIT32_02040 PF02583 Metal-sensitive transcriptional repressor LIT32_02050 PF00581 Rhodanese-like domain LIT32_02055 PF01206 Sulfurtransferase TusA LIT32_02055 PF00581 Rhodanese-like domain LIT32_02060 PF13686 DsrE/DsrF/DrsH-like family LIT32_02065 PF00581 Rhodanese-like domain LIT32_02065 PF00753 Metallo-beta-lactamase superfamily LIT32_02070 PF01206 Sulfurtransferase TusA LIT32_02075 PF13686 DsrE/DsrF/DrsH-like family LIT32_02080 PF01925 Sulfite exporter TauE/SafE LIT32_02085 PF01207 Dihydrouridine synthase (Dus) LIT32_02115 PF13538 UvrD-like helicase C-terminal domain LIT32_02125 PF06146 Phosphate-starvation-inducible E LIT32_02130 PF07690 Major Facilitator Superfamily LIT32_02135 PF02416 mttA/Hcf106 family LIT32_02140 PF09423 PhoD-like phosphatase LIT32_02140 PF16655 PhoD-like phosphatase, N-terminal domain LIT32_02145 PF01235 Sodium:alanine symporter family LIT32_02150 PF04960 Glutaminase LIT32_02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_02160 PF08664 YcbB domain LIT32_02160 PF00072 Response regulator receiver domain LIT32_02165 PF01381 Helix-turn-helix LIT32_02170 PF00710 Asparaginase, N-terminal LIT32_02170 PF17763 Glutaminase/Asparaginase C-terminal domain LIT32_02175 PF10415 Fumarase C C-terminus LIT32_02175 PF00206 Lyase LIT32_02180 PF03553 Na+/H+ antiporter family LIT32_02195 PF01638 HxlR-like helix-turn-helix LIT32_02200 PF00881 Nitroreductase family LIT32_02205 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_02210 PF06719 AraC-type transcriptional regulator N-terminus LIT32_02210 PF12833 Helix-turn-helix domain LIT32_02225 PF03061 Thioesterase superfamily LIT32_02230 PF03466 LysR substrate binding domain LIT32_02230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_02235 PF07308 Protein of unknown function (DUF1456) LIT32_02245 PF02225 PA domain LIT32_02245 PF04389 Peptidase family M28 LIT32_02265 PF01614 Bacterial transcriptional regulator LIT32_02265 PF09339 IclR helix-turn-helix domain LIT32_02270 PF00294 pfkB family carbohydrate kinase LIT32_02280 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT32_02280 PF13378 Enolase C-terminal domain-like LIT32_02285 PF07690 Major Facilitator Superfamily LIT32_02290 PF03611 PTS system sugar-specific permease component LIT32_02300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_02305 PF00005 ABC transporter LIT32_02315 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_02320 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_02325 PF00005 ABC transporter LIT32_02330 PF01596 O-methyltransferase LIT32_02350 PF01979 Amidohydrolase family LIT32_02355 PF03841 L-seryl-tRNA selenium transferase LIT32_02360 PF07071 KDGP aldolase LIT32_02370 PF00392 Bacterial regulatory proteins, gntR family LIT32_02370 PF07702 UTRA domain LIT32_02375 PF02447 GntP family permease LIT32_02385 PF10502 Signal peptidase, peptidase S26 LIT32_02405 PF01256 Carbohydrate kinase LIT32_02415 PF00857 Isochorismatase family LIT32_02420 PF08818 Domain of unknown function (DU1801) LIT32_02430 PF01758 Sodium Bile acid symporter family LIT32_02435 PF00392 Bacterial regulatory proteins, gntR family LIT32_02435 PF00155 Aminotransferase class I and II LIT32_02440 PF01810 LysE type translocator LIT32_02445 PF14501 GHKL domain LIT32_02450 PF04397 LytTr DNA-binding domain LIT32_02450 PF00072 Response regulator receiver domain LIT32_02455 PF00005 ABC transporter LIT32_02460 PF12679 ABC-2 family transporter protein LIT32_02465 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT32_02465 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT32_02470 PF00696 Amino acid kinase family LIT32_02470 PF01472 PUA domain LIT32_02475 PF00171 Aldehyde dehydrogenase family LIT32_02525 PF17353 Family of unknown function (DUF5381) LIT32_02530 PF00741 Gas vesicle protein LIT32_02545 PF00741 Gas vesicle protein LIT32_02555 PF07728 AAA domain (dynein-related subfamily) LIT32_02575 PF00741 Gas vesicle protein LIT32_02580 PF00741 Gas vesicle protein LIT32_02580 PF05121 Gas vesicle protein K LIT32_02585 PF00741 Gas vesicle protein LIT32_02600 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein LIT32_02605 PF05816 Toxic anion resistance protein (TelA) LIT32_02615 PF02875 Mur ligase family, glutamate ligase domain LIT32_02615 PF08245 Mur ligase middle domain LIT32_02615 PF01225 Mur ligase family, catalytic domain LIT32_02620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT32_02620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT32_02630 PF12728 Helix-turn-helix domain LIT32_02635 PF16888 Domain of unknown function (DUF5082) LIT32_02645 PF14431 YwqJ-like deaminase LIT32_02645 PF14449 Pre-toxin TG LIT32_02645 PF04740 LXG domain of WXG superfamily LIT32_02655 PF14431 YwqJ-like deaminase LIT32_02655 PF04740 LXG domain of WXG superfamily LIT32_02655 PF14449 Pre-toxin TG LIT32_02695 PF00293 NUDIX domain LIT32_02700 PF00857 Isochorismatase family LIT32_02705 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LIT32_02705 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LIT32_02705 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LIT32_02710 PF01467 Cytidylyltransferase-like LIT32_02715 PF02540 NAD synthase LIT32_02720 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIT32_02720 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LIT32_02725 PF03401 Tripartite tricarboxylate transporter family receptor LIT32_02735 PF01970 Tripartite tricarboxylate transporter TctA family LIT32_02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_02740 PF17203 Single cache domain 3 LIT32_02740 PF00989 PAS fold LIT32_02740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIT32_02745 PF00072 Response regulator receiver domain LIT32_02745 PF12431 Transcriptional regulator LIT32_02755 PF04740 LXG domain of WXG superfamily LIT32_02755 PF14436 Bacterial EndoU nuclease LIT32_02775 PF06738 Putative threonine/serine exporter LIT32_02780 PF12821 Threonine/Serine exporter, ThrE LIT32_02780 PF06738 Putative threonine/serine exporter LIT32_02790 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_02795 PF01235 Sodium:alanine symporter family LIT32_02805 PF00664 ABC transporter transmembrane region LIT32_02805 PF00005 ABC transporter LIT32_02810 PF00664 ABC transporter transmembrane region LIT32_02810 PF00005 ABC transporter LIT32_02815 PF01965 DJ-1/PfpI family LIT32_02820 PF13458 Periplasmic binding protein LIT32_02825 PF02653 Branched-chain amino acid transport system / permease component LIT32_02830 PF02653 Branched-chain amino acid transport system / permease component LIT32_02830 PF11862 Domain of unknown function (DUF3382) LIT32_02835 PF00005 ABC transporter LIT32_02835 PF12399 Branched-chain amino acid ATP-binding cassette transporter LIT32_02840 PF00005 ABC transporter LIT32_02845 PF07690 Major Facilitator Superfamily LIT32_02850 PF04341 Protein of unknown function, DUF485 LIT32_02855 PF00474 Sodium:solute symporter family LIT32_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_02865 PF00512 His Kinase A (phospho-acceptor) domain LIT32_02870 PF13722 5TM C-terminal transporter carbon starvation CstA LIT32_02870 PF02554 Carbon starvation protein CstA LIT32_02890 PF04231 Endonuclease I LIT32_02895 PF03358 NADPH-dependent FMN reductase LIT32_02895 PF01566 Natural resistance-associated macrophage protein LIT32_02905 PF00005 ABC transporter LIT32_02905 PF16326 ABC transporter C-terminal domain LIT32_02905 PF12848 ABC transporter LIT32_02910 PF00106 short chain dehydrogenase LIT32_02915 PF00474 Sodium:solute symporter family LIT32_02920 PF11755 Protein of unknown function (DUF3311) LIT32_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_02940 PF00672 HAMP domain LIT32_02940 PF07730 Histidine kinase LIT32_02945 PF00196 Bacterial regulatory proteins, luxR family LIT32_02945 PF00072 Response regulator receiver domain LIT32_02950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT32_02955 PF02805 Metal binding domain of Ada LIT32_02955 PF12833 Helix-turn-helix domain LIT32_02970 PF02311 AraC-like ligand binding domain LIT32_02970 PF12833 Helix-turn-helix domain LIT32_02975 PF13492 GAF domain LIT32_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_02975 PF06580 Histidine kinase LIT32_02975 PF07694 5TMR of 5TMR-LYT LIT32_02980 PF00005 ABC transporter LIT32_02980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_02985 PF00005 ABC transporter LIT32_02985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_02990 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_02995 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_02995 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_03005 PF07969 Amidohydrolase family LIT32_03010 PF07969 Amidohydrolase family LIT32_03015 PF00892 EamA-like transporter family LIT32_03030 PF08402 TOBE domain LIT32_03030 PF00005 ABC transporter LIT32_03035 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03040 PF13419 Haloacid dehalogenase-like hydrolase LIT32_03045 PF00266 Aminotransferase class-V LIT32_03055 PF00455 DeoR C terminal sensor domain LIT32_03055 PF08220 DeoR-like helix-turn-helix domain LIT32_03075 PF00324 Amino acid permease LIT32_03085 PF03631 Virulence factor BrkB LIT32_03090 PF03372 Endonuclease/Exonuclease/phosphatase family LIT32_03095 PF02378 Phosphotransferase system, EIIC LIT32_03095 PF00367 phosphotransferase system, EIIB LIT32_03095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT32_03100 PF02898 Nitric oxide synthase, oxygenase domain LIT32_03105 PF00171 Aldehyde dehydrogenase family LIT32_03110 PF00202 Aminotransferase class-III LIT32_03115 PF00158 Sigma-54 interaction domain LIT32_03120 PF00158 Sigma-54 interaction domain LIT32_03120 PF13426 PAS domain LIT32_03120 PF02954 Bacterial regulatory protein, Fis family LIT32_03125 PF12544 Lysine-2,3-aminomutase LIT32_03145 PF00202 Aminotransferase class-III LIT32_03150 PF01144 Coenzyme A transferase LIT32_03155 PF01144 Coenzyme A transferase LIT32_03160 PF00108 Thiolase, N-terminal domain LIT32_03160 PF02803 Thiolase, C-terminal domain LIT32_03165 PF01546 Peptidase family M20/M25/M40 LIT32_03165 PF07687 Peptidase dimerisation domain LIT32_03170 PF00324 Amino acid permease LIT32_03180 PF00708 Acylphosphatase LIT32_03190 PF03475 3-alpha domain LIT32_03190 PF03473 MOSC domain LIT32_03195 PF07690 Major Facilitator Superfamily LIT32_03210 PF09350 Domain of unknown function (DUF1992) LIT32_03215 PF00875 DNA photolyase LIT32_03215 PF03441 FAD binding domain of DNA photolyase LIT32_03225 PF00367 phosphotransferase system, EIIB LIT32_03225 PF02378 Phosphotransferase system, EIIC LIT32_03230 PF00128 Alpha amylase, catalytic domain LIT32_03230 PF16657 Maltogenic Amylase, C-terminal domain LIT32_03235 PF00392 Bacterial regulatory proteins, gntR family LIT32_03235 PF07702 UTRA domain LIT32_03240 PF12146 Serine aminopeptidase, S33 LIT32_03245 PF00149 Calcineurin-like phosphoesterase LIT32_03245 PF02872 5'-nucleotidase, C-terminal domain LIT32_03250 PF01965 DJ-1/PfpI family LIT32_03260 PF06569 Protein of unknown function (DUF1128) LIT32_03265 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT32_03275 PF03631 Virulence factor BrkB LIT32_03290 PF07690 Major Facilitator Superfamily LIT32_03300 PF16242 Pyridoxamine 5'-phosphate oxidase like LIT32_03305 PF01699 Sodium/calcium exchanger protein LIT32_03315 PF14167 YfkD-like protein LIT32_03320 PF08756 YfkB-like domain LIT32_03320 PF04055 Radical SAM superfamily LIT32_03330 PF05683 Fumarase C-terminus LIT32_03330 PF05681 Fumarate hydratase (Fumerase) LIT32_03335 PF01522 Polysaccharide deacetylase LIT32_03340 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT32_03345 PF01938 TRAM domain LIT32_03345 PF05958 tRNA (Uracil-5-)-methyltransferase LIT32_03360 PF00012 Hsp70 protein LIT32_03365 PF00270 DEAD/DEAH box helicase LIT32_03365 PF00271 Helicase conserved C-terminal domain LIT32_03370 PF18267 Rubredoxin NAD+ reductase C-terminal domain LIT32_03370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_03370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIT32_03370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIT32_03370 PF04324 BFD-like [2Fe-2S] binding domain LIT32_03375 PF01568 Molydopterin dinucleotide binding domain LIT32_03375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIT32_03375 PF00384 Molybdopterin oxidoreductase LIT32_03380 PF18267 Rubredoxin NAD+ reductase C-terminal domain LIT32_03380 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_03380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIT32_03380 PF04324 BFD-like [2Fe-2S] binding domain LIT32_03380 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIT32_03385 PF00355 Rieske [2Fe-2S] domain LIT32_03390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_03395 PF00892 EamA-like transporter family LIT32_03400 PF07690 Major Facilitator Superfamily LIT32_03405 PF14151 YfhD-like protein LIT32_03420 PF01979 Amidohydrolase family LIT32_03425 PF08338 Domain of unknown function (DUF1731) LIT32_03425 PF01370 NAD dependent epimerase/dehydratase family LIT32_03430 PF02631 RecX family LIT32_03435 PF00106 short chain dehydrogenase LIT32_03440 PF08838 Protein of unknown function (DUF1811) LIT32_03450 PF08176 Small acid-soluble spore protein K family LIT32_03455 PF14043 WVELL protein LIT32_03460 PF04307 LexA-binding, inner membrane-associated putative hydrolase LIT32_03465 PF14815 NUDIX domain LIT32_03465 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT32_03485 PF14182 YgaB-like protein LIT32_03490 PF04167 Protein of unknown function (DUF402) LIT32_03495 PF00005 ABC transporter LIT32_03495 PF00664 ABC transporter transmembrane region LIT32_03500 PF00005 ABC transporter LIT32_03500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_03505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_03505 PF00005 ABC transporter LIT32_03510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_03515 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03520 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03520 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_03525 PF06081 Aromatic acid exporter family member 1 LIT32_03530 PF01493 GXGXG motif LIT32_03530 PF04898 Glutamate synthase central domain LIT32_03530 PF00310 Glutamine amidotransferases class-II LIT32_03530 PF01645 Conserved region in glutamate synthase LIT32_03535 PF00202 Aminotransferase class-III LIT32_03545 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03550 PF07885 Ion channel LIT32_03555 PF00578 AhpC/TSA family LIT32_03560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT32_03560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT32_03565 PF01475 Ferric uptake regulator family LIT32_03570 PF11023 Zinc-ribbon containing domain LIT32_03575 PF18576 Helix-turn-helix domain LIT32_03575 PF14540 Nucleotidyltransferase-like LIT32_03700 PF08244 Glycosyl hydrolases family 32 C terminal LIT32_03700 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIT32_03715 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03720 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03725 PF01547 Bacterial extracellular solute-binding protein LIT32_03730 PF02743 Cache domain LIT32_03730 PF00672 HAMP domain LIT32_03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_03730 PF06580 Histidine kinase LIT32_03735 PF12833 Helix-turn-helix domain LIT32_03735 PF00072 Response regulator receiver domain LIT32_03750 PF08331 Domain of unknown function (DUF1730) LIT32_03755 PF12671 Putative amidase domain LIT32_03760 PF00588 SpoU rRNA Methylase family LIT32_03765 PF08298 PrkA AAA domain LIT32_03765 PF06798 PrkA serine protein kinase C-terminal domain LIT32_03775 PF04285 Protein of unknown function (DUF444) LIT32_03780 PF01435 Peptidase family M48 LIT32_03785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_03790 PF02378 Phosphotransferase system, EIIC LIT32_03795 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIT32_03800 PF02056 Family 4 glycosyl hydrolase LIT32_03800 PF11975 Family 4 glycosyl hydrolase C-terminal domain LIT32_03805 PF04794 YdjC-like protein LIT32_03810 PF01418 Helix-turn-helix domain, rpiR family LIT32_03810 PF01380 SIS domain LIT32_03815 PF00294 pfkB family carbohydrate kinase LIT32_03820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_03820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_03825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_03825 PF02378 Phosphotransferase system, EIIC LIT32_03825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_03830 PF01116 Fructose-bisphosphate aldolase class-II LIT32_03845 PF03610 PTS system fructose IIA component LIT32_03845 PF00874 PRD domain LIT32_03845 PF00158 Sigma-54 interaction domain LIT32_03850 PF00512 His Kinase A (phospho-acceptor) domain LIT32_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_03855 PF00486 Transcriptional regulatory protein, C terminal LIT32_03855 PF00072 Response regulator receiver domain LIT32_03860 PF02915 Rubrerythrin LIT32_03875 PF00356 Bacterial regulatory proteins, lacI family LIT32_03880 PF01547 Bacterial extracellular solute-binding protein LIT32_03885 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03890 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_03900 PF04703 FaeA-like protein LIT32_03900 PF00072 Response regulator receiver domain LIT32_03905 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIT32_03905 PF17203 Single cache domain 3 LIT32_03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_03910 PF03480 Bacterial extracellular solute-binding protein, family 7 LIT32_03915 PF00375 Sodium:dicarboxylate symporter family LIT32_03920 PF01865 Protein of unknown function DUF47 LIT32_03925 PF01384 Phosphate transporter family LIT32_03930 PF00881 Nitroreductase family LIT32_03935 PF01476 LysM domain LIT32_03935 PF00756 Putative esterase LIT32_03940 PF02525 Flavodoxin-like fold LIT32_03950 PF01209 ubiE/COQ5 methyltransferase family LIT32_03955 PF03466 LysR substrate binding domain LIT32_03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_03960 PF00082 Subtilase family LIT32_03965 PF07681 DoxX LIT32_03975 PF00440 Bacterial regulatory proteins, tetR family LIT32_03975 PF16295 Tetracyclin repressor-like, C-terminal domain LIT32_03980 PF01494 FAD binding domain LIT32_03985 PF00248 Aldo/keto reductase family LIT32_03990 PF04309 Glycerol-3-phosphate responsive antiterminator LIT32_03995 PF02416 mttA/Hcf106 family LIT32_04005 PF09423 PhoD-like phosphatase LIT32_04005 PF16655 PhoD-like phosphatase, N-terminal domain LIT32_04010 PF12787 EcsC protein family LIT32_04015 PF00248 Aldo/keto reductase family LIT32_04020 PF04203 Sortase domain LIT32_04025 PF00583 Acetyltransferase (GNAT) family LIT32_04030 PF01479 S4 domain LIT32_04030 PF00849 RNA pseudouridylate synthase LIT32_04035 PF17326 Family of unknown function (DUF5365) LIT32_04045 PF02600 Disulfide bond formation protein DsbB LIT32_04050 PF00571 CBS domain LIT32_04055 PF13419 Haloacid dehalogenase-like hydrolase LIT32_04060 PF00583 Acetyltransferase (GNAT) family LIT32_04060 PF00795 Carbon-nitrogen hydrolase LIT32_04065 PF04309 Glycerol-3-phosphate responsive antiterminator LIT32_04070 PF00230 Major intrinsic protein LIT32_04075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIT32_04075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIT32_04080 PF01266 FAD dependent oxidoreductase LIT32_04080 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LIT32_04085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIT32_04085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIT32_04085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIT32_04085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIT32_04095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIT32_04095 PF00356 Bacterial regulatory proteins, lacI family LIT32_04100 PF00128 Alpha amylase, catalytic domain LIT32_04105 PF01547 Bacterial extracellular solute-binding protein LIT32_04110 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_04115 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_04120 PF00107 Zinc-binding dehydrogenase LIT32_04125 PF01261 Xylose isomerase-like TIM barrel LIT32_04130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_04130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_04135 PF03636 Glycosyl hydrolase family 65, N-terminal domain LIT32_04135 PF03632 Glycosyl hydrolase family 65 central catalytic domain LIT32_04135 PF03633 Glycosyl hydrolase family 65, C-terminal domain LIT32_04140 PF13419 Haloacid dehalogenase-like hydrolase LIT32_04145 PF13185 GAF domain LIT32_04145 PF07730 Histidine kinase LIT32_04150 PF00196 Bacterial regulatory proteins, luxR family LIT32_04150 PF00072 Response regulator receiver domain LIT32_04155 PF03358 NADPH-dependent FMN reductase LIT32_04160 PF14148 YhdB-like protein LIT32_04165 PF04239 Protein of unknown function (DUF421) LIT32_04180 PF00294 pfkB family carbohydrate kinase LIT32_04185 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_04190 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_04205 PF00356 Bacterial regulatory proteins, lacI family LIT32_04210 PF03747 ADP-ribosylglycohydrolase LIT32_04215 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT32_04220 PF00756 Putative esterase LIT32_04220 PF01476 LysM domain LIT32_04225 PF02082 Transcriptional regulator LIT32_04230 PF00970 Oxidoreductase FAD-binding domain LIT32_04230 PF00175 Oxidoreductase NAD-binding domain LIT32_04230 PF00042 Globin LIT32_04235 PF07690 Major Facilitator Superfamily LIT32_04240 PF04293 SpoVR like protein LIT32_04250 PF07690 Major Facilitator Superfamily LIT32_04255 PF02416 mttA/Hcf106 family LIT32_04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_04280 PF01022 Bacterial regulatory protein, arsR family LIT32_04285 PF02040 Arsenical pump membrane protein LIT32_04290 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT32_04300 PF05343 M42 glutamyl aminopeptidase LIT32_04305 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LIT32_04310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LIT32_04315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_04315 PF00512 His Kinase A (phospho-acceptor) domain LIT32_04315 PF00989 PAS fold LIT32_04315 PF16736 Single Cache-like LIT32_04325 PF17770 Ribonuclease J C-terminal domain LIT32_04325 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT32_04325 PF00753 Metallo-beta-lactamase superfamily LIT32_04330 PF07690 Major Facilitator Superfamily LIT32_04335 PF01619 Proline dehydrogenase LIT32_04340 PF00171 Aldehyde dehydrogenase family LIT32_04345 PF00474 Sodium:solute symporter family LIT32_04350 PF13556 PucR C-terminal helix-turn-helix domain LIT32_04350 PF17853 GGDEF-like domain LIT32_04355 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LIT32_04360 PF06803 Protein of unknown function (DUF1232) LIT32_04365 PF04298 Putative neutral zinc metallopeptidase LIT32_04370 PF01979 Amidohydrolase family LIT32_04380 PF13426 PAS domain LIT32_04380 PF02954 Bacterial regulatory protein, Fis family LIT32_04380 PF00158 Sigma-54 interaction domain LIT32_04385 PF00171 Aldehyde dehydrogenase family LIT32_04390 PF00202 Aminotransferase class-III LIT32_04395 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIT32_04395 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIT32_04400 PF01569 PAP2 superfamily LIT32_04405 PF03631 Virulence factor BrkB LIT32_04410 PF02559 CarD-like/TRCF domain LIT32_04415 PF01022 Bacterial regulatory protein, arsR family LIT32_04420 PF00860 Permease family LIT32_04425 PF03466 LysR substrate binding domain LIT32_04425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_04430 PF07702 UTRA domain LIT32_04430 PF00392 Bacterial regulatory proteins, gntR family LIT32_04435 PF13416 Bacterial extracellular solute-binding protein LIT32_04440 PF00005 ABC transporter LIT32_04440 PF08402 TOBE domain LIT32_04445 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_04450 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_04460 PF04324 BFD-like [2Fe-2S] binding domain LIT32_04460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_04465 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_04465 PF17806 Sarcosine oxidase A3 domain LIT32_04470 PF01266 FAD dependent oxidoreductase LIT32_04480 PF01266 FAD dependent oxidoreductase LIT32_04485 PF00149 Calcineurin-like phosphoesterase LIT32_04490 PF13115 YtkA-like LIT32_04505 PF12867 DinB superfamily LIT32_04520 PF01594 AI-2E family transporter LIT32_04530 PF00999 Sodium/hydrogen exchanger family LIT32_04530 PF02080 TrkA-C domain LIT32_04530 PF03471 Transporter associated domain LIT32_04540 PF11871 Domain of unknown function (DUF3391) LIT32_04540 PF01966 HD domain LIT32_04560 PF02566 OsmC-like protein LIT32_04575 PF00924 Mechanosensitive ion channel LIT32_04580 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT32_04580 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT32_04585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_04585 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_04590 PF17444 Uncharacterized YhdX-like LIT32_04600 PF00268 Ribonucleotide reductase, small chain LIT32_04605 PF03477 ATP cone domain LIT32_04605 PF00317 Ribonucleotide reductase, all-alpha domain LIT32_04605 PF02867 Ribonucleotide reductase, barrel domain LIT32_04610 PF01063 Amino-transferase class IV LIT32_04615 PF03553 Na+/H+ antiporter family LIT32_04635 PF09557 Domain of unknown function (DUF2382) LIT32_04635 PF05239 PRC-barrel domain LIT32_04655 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT32_04665 PF00149 Calcineurin-like phosphoesterase LIT32_04675 PF12146 Serine aminopeptidase, S33 LIT32_04695 PF01638 HxlR-like helix-turn-helix LIT32_04705 PF00155 Aminotransferase class I and II LIT32_04710 PF02567 Phenazine biosynthesis-like protein LIT32_04725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_04735 PF00582 Universal stress protein family LIT32_04740 PF00912 Transglycosylase LIT32_04740 PF00905 Penicillin binding protein transpeptidase domain LIT32_04755 PF01906 Putative heavy-metal-binding LIT32_04760 PF00005 ABC transporter LIT32_04760 PF00664 ABC transporter transmembrane region LIT32_04765 PF00664 ABC transporter transmembrane region LIT32_04765 PF00005 ABC transporter LIT32_04770 PF13460 NAD(P)H-binding LIT32_04775 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_04780 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_04785 PF00005 ABC transporter LIT32_04795 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT32_04805 PF00005 ABC transporter LIT32_04805 PF17912 MalK OB fold domain LIT32_04805 PF03459 TOBE domain LIT32_04810 PF13556 PucR C-terminal helix-turn-helix domain LIT32_04820 PF17277 Family of unknown function (DUF5342) LIT32_04830 PF14398 YheC/D like ATP-grasp LIT32_04835 PF14398 YheC/D like ATP-grasp LIT32_04840 PF06133 Control of competence regulator ComK, YlbF/YmcA LIT32_04865 PF04055 Radical SAM superfamily LIT32_04875 PF01264 Chorismate synthase LIT32_04915 PF00501 AMP-binding enzyme LIT32_04915 PF14535 AMP-binding enzyme C-terminal domain LIT32_04925 PF01817 Chorismate mutase type II LIT32_04925 PF00793 DAHP synthetase I family LIT32_04955 PF13193 AMP-binding enzyme C-terminal domain LIT32_04955 PF00501 AMP-binding enzyme LIT32_04960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_04960 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_04960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_04965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT32_04965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT32_04970 PF00108 Thiolase, N-terminal domain LIT32_04970 PF02803 Thiolase, C-terminal domain LIT32_04975 PF00378 Enoyl-CoA hydratase/isomerase LIT32_04985 PF13732 Domain of unknown function (DUF4162) LIT32_04985 PF00005 ABC transporter LIT32_04995 PF00149 Calcineurin-like phosphoesterase LIT32_05000 PF13514 AAA domain LIT32_05005 PF07690 Major Facilitator Superfamily LIT32_05010 PF01966 HD domain LIT32_05015 PF14147 Sporulation protein YhaL LIT32_05020 PF05698 Bacterial trigger factor protein (TF) C-terminus LIT32_05025 PF09680 Family of unknown function LIT32_05030 PF09680 Family of unknown function LIT32_05040 PF11667 Putative zincin peptidase LIT32_05045 PF08963 Protein of unknown function (DUF1878) LIT32_05050 PF01047 MarR family LIT32_05055 PF12732 YtxH-like protein LIT32_05065 PF17099 Tryptophan transporter TrpP LIT32_05070 PF00266 Aminotransferase class-V LIT32_05075 PF01230 HIT domain LIT32_05085 PF00005 ABC transporter LIT32_05090 PF05975 Bacterial ABC transporter protein EcsB LIT32_05095 PF12787 EcsC protein family LIT32_05100 PF01546 Peptidase family M20/M25/M40 LIT32_05100 PF07687 Peptidase dimerisation domain LIT32_05105 PF01569 PAP2 superfamily LIT32_05115 PF03992 Antibiotic biosynthesis monooxygenase LIT32_05120 PF00912 Transglycosylase LIT32_05120 PF00905 Penicillin binding protein transpeptidase domain LIT32_05125 PF01208 Uroporphyrinogen decarboxylase (URO-D) LIT32_05130 PF00762 Ferrochelatase LIT32_05135 PF01593 Flavin containing amine oxidoreductase LIT32_05140 PF17932 Tetracyclin repressor-like, C-terminal domain LIT32_05140 PF00440 Bacterial regulatory proteins, tetR family LIT32_05150 PF00356 Bacterial regulatory proteins, lacI family LIT32_05160 PF06628 Catalase-related immune-responsive LIT32_05160 PF00199 Catalase LIT32_05160 PF18011 C-terminal domain found in long catalases LIT32_05165 PF14149 YhfH-like protein LIT32_05170 PF12706 Beta-lactamase superfamily domain LIT32_05175 PF10437 Bacterial lipoate protein ligase C-terminus LIT32_05175 PF03099 Biotin/lipoate A/B protein ligase family LIT32_05180 PF13193 AMP-binding enzyme C-terminal domain LIT32_05180 PF00501 AMP-binding enzyme LIT32_05185 PF00378 Enoyl-CoA hydratase/isomerase LIT32_05190 PF07883 Cupin domain LIT32_05190 PF01381 Helix-turn-helix LIT32_05195 PF03591 AzlC protein LIT32_05205 PF16491 CAAX prenyl protease N-terminal, five membrane helices LIT32_05205 PF01435 Peptidase family M48 LIT32_05210 PF00463 Isocitrate lyase family LIT32_05215 PF08858 IDEAL domain LIT32_05220 PF01074 Glycosyl hydrolases family 38 N-terminal domain LIT32_05220 PF07748 Glycosyl hydrolases family 38 C-terminal domain LIT32_05220 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 LIT32_05220 PF09261 Alpha mannosidase middle domain LIT32_05220 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain LIT32_05235 PF04854 Protein of unknown function, DUF624 LIT32_05245 PF02743 Cache domain LIT32_05245 PF00672 HAMP domain LIT32_05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_05245 PF06580 Histidine kinase LIT32_05250 PF00072 Response regulator receiver domain LIT32_05250 PF12833 Helix-turn-helix domain LIT32_05255 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05260 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05265 PF12010 Domain of unknown function (DUF3502) LIT32_05270 PF00232 Glycosyl hydrolase family 1 LIT32_05275 PF00480 ROK family LIT32_05280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_05285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_05285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_05290 PF00005 ABC transporter LIT32_05295 PF02653 Branched-chain amino acid transport system / permease component LIT32_05300 PF13407 Periplasmic binding protein domain LIT32_05305 PF00356 Bacterial regulatory proteins, lacI family LIT32_05310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_05310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_05315 PF00294 pfkB family carbohydrate kinase LIT32_05320 PF00171 Aldehyde dehydrogenase family LIT32_05325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT32_05325 PF00205 Thiamine pyrophosphate enzyme, central domain LIT32_05325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT32_05330 PF01261 Xylose isomerase-like TIM barrel LIT32_05335 PF04962 KduI/IolB family LIT32_05340 PF07690 Major Facilitator Superfamily LIT32_05345 PF06338 ComK protein LIT32_05355 PF09335 SNARE associated Golgi protein LIT32_05360 PF10502 Signal peptidase, peptidase S26 LIT32_05370 PF12705 PD-(D/E)XK nuclease superfamily LIT32_05375 PF12705 PD-(D/E)XK nuclease superfamily LIT32_05375 PF00580 UvrD/REP helicase N-terminal domain LIT32_05375 PF13361 UvrD-like helicase C-terminal domain LIT32_05380 PF00149 Calcineurin-like phosphoesterase LIT32_05380 PF12320 Type 5 capsule protein repressor C-terminal domain LIT32_05385 PF13476 AAA domain LIT32_05395 PF10676 Spore germination protein gerPA/gerPF LIT32_05400 PF10970 Spore germination protein GerPE LIT32_05410 PF10737 Spore germination protein GerPC LIT32_05415 PF10803 Spore germination GerPB LIT32_05420 PF10676 Spore germination protein gerPA/gerPF LIT32_05425 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05430 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05435 PF01547 Bacterial extracellular solute-binding protein LIT32_05440 PF00933 Glycosyl hydrolase family 3 N terminal domain LIT32_05440 PF01915 Glycosyl hydrolase family 3 C-terminal domain LIT32_05440 PF14310 Fibronectin type III-like domain LIT32_05445 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LIT32_05450 PF00356 Bacterial regulatory proteins, lacI family LIT32_05465 PF06719 AraC-type transcriptional regulator N-terminus LIT32_05465 PF12833 Helix-turn-helix domain LIT32_05475 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT32_05475 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT32_05485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIT32_05485 PF01348 Type II intron maturase LIT32_05490 PF03845 Spore germination protein LIT32_05500 PF00440 Bacterial regulatory proteins, tetR family LIT32_05525 PF01131 DNA topoisomerase LIT32_05525 PF01751 Toprim domain LIT32_05535 PF04235 Protein of unknown function (DUF418) LIT32_05540 PF09388 Spo0E like sporulation regulatory protein LIT32_05545 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT32_05550 PF00202 Aminotransferase class-III LIT32_05555 PF07457 Protein of unknown function (DUF1516) LIT32_05565 PF00733 Asparagine synthase LIT32_05565 PF13537 Glutamine amidotransferase domain LIT32_05570 PF03180 NLPA lipoprotein LIT32_05575 PF00909 Ammonium Transporter Family LIT32_05580 PF01554 MatE LIT32_05585 PF12833 Helix-turn-helix domain LIT32_05585 PF02311 AraC-like ligand binding domain LIT32_05595 PF00324 Amino acid permease LIT32_05600 PF00128 Alpha amylase, catalytic domain LIT32_05600 PF16657 Maltogenic Amylase, C-terminal domain LIT32_05600 PF02903 Alpha amylase, N-terminal ig-like domain LIT32_05605 PF13416 Bacterial extracellular solute-binding protein LIT32_05610 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05615 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05620 PF03423 Carbohydrate binding domain (family 25) LIT32_05620 PF00128 Alpha amylase, catalytic domain LIT32_05620 PF01373 Glycosyl hydrolase family 14 LIT32_05625 PF00356 Bacterial regulatory proteins, lacI family LIT32_05630 PF01804 Penicillin amidase LIT32_05650 PF02833 DHHA2 domain LIT32_05650 PF01368 DHH family LIT32_05670 PF02310 B12 binding domain LIT32_05670 PF02607 B12 binding domain LIT32_05670 PF02574 Homocysteine S-methyltransferase LIT32_05670 PF02965 Vitamin B12 dependent methionine synthase, activation domain LIT32_05670 PF00809 Pterin binding enzyme LIT32_05675 PF02219 Methylenetetrahydrofolate reductase LIT32_05675 PF02574 Homocysteine S-methyltransferase LIT32_05680 PF04461 Protein of unknown function (DUF520) LIT32_05685 PF17783 CvfB-like winged helix domain LIT32_05685 PF13509 S1 domain LIT32_05690 PF02608 ABC transporter substrate-binding protein PnrA-like LIT32_05695 PF12729 Four helix bundle sensory module for signal transduction LIT32_05695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT32_05695 PF00672 HAMP domain LIT32_05705 PF02645 Uncharacterised protein, DegV family COG1307 LIT32_05710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_05710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_05715 PF12690 Intracellular proteinase inhibitor LIT32_05735 PF00326 Prolyl oligopeptidase family LIT32_05740 PF01883 Iron-sulfur cluster assembly protein LIT32_05745 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIT32_05745 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIT32_05750 PF01960 ArgJ family LIT32_05755 PF00696 Amino acid kinase family LIT32_05760 PF00202 Aminotransferase class-III LIT32_05765 PF00117 Glutamine amidotransferase class-I LIT32_05765 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LIT32_05770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LIT32_05770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT32_05775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIT32_05775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIT32_05780 PF14168 YjzC-like protein LIT32_05800 PF02608 ABC transporter substrate-binding protein PnrA-like LIT32_05805 PF10815 ComZ LIT32_05810 PF03193 RsgA GTPase LIT32_05820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIT32_05820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIT32_05825 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT32_05825 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT32_05830 PF10026 Predicted Zn-dependent protease (DUF2268) LIT32_05835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_05835 PF00005 ABC transporter LIT32_05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_05840 PF00005 ABC transporter LIT32_05845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_05850 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05855 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05855 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_05860 PF12227 Protein of unknown function (DUF3603) LIT32_05870 PF00579 tRNA synthetases class I (W and Y) LIT32_05880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_05885 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05890 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_05890 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_05895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_05895 PF00005 ABC transporter LIT32_05900 PF00005 ABC transporter LIT32_05900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_05915 PF13508 Acetyltransferase (GNAT) domain LIT32_05920 PF03960 ArsC family LIT32_05925 PF03741 Integral membrane protein TerC family LIT32_05930 PF05389 Negative regulator of genetic competence (MecA) LIT32_05935 PF13091 PLD-like domain LIT32_05935 PF13396 Phospholipase_D-nuclease N-terminal LIT32_05940 PF06054 Competence protein CoiA-like family LIT32_05950 PF01432 Peptidase family M3 LIT32_05950 PF08439 Oligopeptidase F LIT32_05965 PF01152 Bacterial-like globin LIT32_05970 PF01464 Transglycosylase SLT domain LIT32_05975 PF01928 CYTH domain LIT32_05985 PF04607 Region found in RelA / SpoT proteins LIT32_05990 PF01513 ATP-NAD kinase LIT32_05995 PF00849 RNA pseudouridylate synthase LIT32_06000 PF00149 Calcineurin-like phosphoesterase LIT32_06005 PF01098 Cell cycle protein LIT32_06010 PF01769 Divalent cation transporter LIT32_06010 PF03448 MgtE intracellular N domain LIT32_06010 PF00571 CBS domain LIT32_06015 PF00999 Sodium/hydrogen exchanger family LIT32_06015 PF02080 TrkA-C domain LIT32_06015 PF02254 TrkA-N domain LIT32_06020 PF03070 TENA/THI-4/PQQC family LIT32_06025 PF02581 Thiamine monophosphate synthase LIT32_06030 PF01266 FAD dependent oxidoreductase LIT32_06040 PF05690 Thiazole biosynthesis protein ThiG LIT32_06045 PF00899 ThiF family LIT32_06050 PF04286 Protein of unknown function (DUF445) LIT32_06075 PF05067 Manganese containing catalase LIT32_06080 PF12652 CotJB protein LIT32_06085 PF11007 Spore coat associated protein JA (CotJA) LIT32_06090 PF01636 Phosphotransferase enzyme family LIT32_06095 PF13439 Glycosyltransferase Family 4 LIT32_06095 PF00534 Glycosyl transferases group 1 LIT32_06110 PF13439 Glycosyltransferase Family 4 LIT32_06110 PF00534 Glycosyl transferases group 1 LIT32_06115 PF01370 NAD dependent epimerase/dehydratase family LIT32_06120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT32_06120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT32_06120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT32_06125 PF13439 Glycosyltransferase Family 4 LIT32_06125 PF00534 Glycosyl transferases group 1 LIT32_06140 PF07098 Protein of unknown function (DUF1360) LIT32_06175 PF14069 Stage VI sporulation protein F LIT32_06180 PF00580 UvrD/REP helicase N-terminal domain LIT32_06180 PF13361 UvrD-like helicase C-terminal domain LIT32_06195 PF04239 Protein of unknown function (DUF421) LIT32_06200 PF13673 Acetyltransferase (GNAT) domain LIT32_06210 PF00756 Putative esterase LIT32_06220 PF00892 EamA-like transporter family LIT32_06225 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT32_06230 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT32_06240 PF10787 Uncharacterised protein from bacillus cereus group LIT32_06270 PF01872 RibD C-terminal domain LIT32_06275 PF12833 Helix-turn-helix domain LIT32_06275 PF02311 AraC-like ligand binding domain LIT32_06285 PF00474 Sodium:solute symporter family LIT32_06290 PF14158 YndJ-like protein LIT32_06295 PF13761 Domain of unknown function (DUF4166) LIT32_06305 PF00300 Histidine phosphatase superfamily (branch 1) LIT32_06310 PF12833 Helix-turn-helix domain LIT32_06310 PF06445 GyrI-like small molecule binding domain LIT32_06320 PF06445 GyrI-like small molecule binding domain LIT32_06320 PF12833 Helix-turn-helix domain LIT32_06325 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LIT32_06325 PF01740 STAS domain LIT32_06330 PF09335 SNARE associated Golgi protein LIT32_06335 PF01098 Cell cycle protein LIT32_06340 PF00501 AMP-binding enzyme LIT32_06340 PF13193 AMP-binding enzyme C-terminal domain LIT32_06355 PF00293 NUDIX domain LIT32_06360 PF01098 Cell cycle protein LIT32_06365 PF00892 EamA-like transporter family LIT32_06375 PF08281 Sigma-70, region 4 LIT32_06375 PF04542 Sigma-70 region 2 LIT32_06385 PF05675 Protein of unknown function (DUF817) LIT32_06390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_06400 PF05163 DinB family LIT32_06405 PF00487 Fatty acid desaturase LIT32_06410 PF07730 Histidine kinase LIT32_06415 PF00196 Bacterial regulatory proteins, luxR family LIT32_06415 PF00072 Response regulator receiver domain LIT32_06435 PF00293 NUDIX domain LIT32_06445 PF07690 Major Facilitator Superfamily LIT32_06455 PF12146 Serine aminopeptidase, S33 LIT32_06460 PF07690 Major Facilitator Superfamily LIT32_06475 PF00005 ABC transporter LIT32_06485 PF13145 PPIC-type PPIASE domain LIT32_06495 PF03061 Thioesterase superfamily LIT32_06510 PF13520 Amino acid permease LIT32_06515 PF01047 MarR family LIT32_06520 PF03176 MMPL family LIT32_06530 PF12697 Alpha/beta hydrolase family LIT32_06535 PF01980 tRNA-methyltransferase O LIT32_06535 PF18389 TrmO C-terminal domain LIT32_06540 PF06039 Malate:quinone oxidoreductase (Mqo) LIT32_06555 PF09992 Phosphodiester glycosidase LIT32_06555 PF12708 Pectate lyase superfamily protein LIT32_06565 PF01709 Transcriptional regulator LIT32_06570 PF13302 Acetyltransferase (GNAT) domain LIT32_06575 PF00455 DeoR C terminal sensor domain LIT32_06575 PF08220 DeoR-like helix-turn-helix domain LIT32_06580 PF13407 Periplasmic binding protein domain LIT32_06585 PF00005 ABC transporter LIT32_06590 PF02653 Branched-chain amino acid transport system / permease component LIT32_06595 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIT32_06595 PF08244 Glycosyl hydrolases family 32 C terminal LIT32_06600 PF03949 Malic enzyme, NAD binding domain LIT32_06600 PF00390 Malic enzyme, N-terminal domain LIT32_06605 PF00206 Lyase LIT32_06605 PF10415 Fumarase C C-terminus LIT32_06610 PF00375 Sodium:dicarboxylate symporter family LIT32_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_06620 PF00072 Response regulator receiver domain LIT32_06620 PF08664 YcbB domain LIT32_06625 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_06630 PF03845 Spore germination protein LIT32_06635 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_06655 PF06013 Proteins of 100 residues with WXG LIT32_06670 PF01842 ACT domain LIT32_06670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT32_06670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT32_06675 PF00072 Response regulator receiver domain LIT32_06675 PF00486 Transcriptional regulatory protein, C terminal LIT32_06690 PF05360 yiaA/B two helix domain LIT32_06715 PF03741 Integral membrane protein TerC family LIT32_06750 PF00005 ABC transporter LIT32_06755 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_06760 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_06765 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_06770 PF06724 Domain of Unknown Function (DUF1206) LIT32_06785 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_06790 PF03845 Spore germination protein LIT32_06795 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_06800 PF07875 Coat F domain LIT32_06810 PF11553 Protein of unknown function (DUF3231) LIT32_06820 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_06820 PF13823 Alcohol dehydrogenase GroES-associated LIT32_06820 PF00107 Zinc-binding dehydrogenase LIT32_06830 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LIT32_06840 PF16868 NMT1-like family LIT32_06900 PF00893 Small Multidrug Resistance protein LIT32_06920 PF03466 LysR substrate binding domain LIT32_06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_06925 PF00194 Eukaryotic-type carbonic anhydrase LIT32_06930 PF00206 Lyase LIT32_06930 PF14698 Argininosuccinate lyase C-terminal LIT32_06935 PF13520 Amino acid permease LIT32_06970 PF00403 Heavy-metal-associated domain LIT32_06975 PF00403 Heavy-metal-associated domain LIT32_07030 PF01738 Dienelactone hydrolase family LIT32_07040 PF00155 Aminotransferase class I and II LIT32_07045 PF03932 CutC family LIT32_07050 PF00902 Sec-independent protein translocase protein (TatC) LIT32_07055 PF02416 mttA/Hcf106 family LIT32_07065 PF08220 DeoR-like helix-turn-helix domain LIT32_07065 PF00455 DeoR C terminal sensor domain LIT32_07075 PF03932 CutC family LIT32_07080 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LIT32_07085 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT32_07090 PF07503 HypF finger LIT32_07090 PF01300 Telomere recombination LIT32_07090 PF17788 HypF Kae1-like domain LIT32_07090 PF00708 Acylphosphatase LIT32_07095 PF01455 HupF/HypC family LIT32_07100 PF01924 Hydrogenase formation hypA family LIT32_07105 PF02769 AIR synthase related protein, C-terminal domain LIT32_07105 PF00586 AIR synthase related protein, N-terminal domain LIT32_07115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LIT32_07115 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LIT32_07120 PF00374 Nickel-dependent hydrogenase LIT32_07130 PF03932 CutC family LIT32_07140 PF01546 Peptidase family M20/M25/M40 LIT32_07150 PF00356 Bacterial regulatory proteins, lacI family LIT32_07170 PF02614 Glucuronate isomerase LIT32_07175 PF03786 D-mannonate dehydratase (UxuA) LIT32_07180 PF00106 short chain dehydrogenase LIT32_07185 PF17676 LD-carboxypeptidase C-terminal domain LIT32_07185 PF02016 LD-carboxypeptidase N-terminal domain LIT32_07190 PF13344 Haloacid dehalogenase-like hydrolase LIT32_07190 PF00293 NUDIX domain LIT32_07200 PF13439 Glycosyltransferase Family 4 LIT32_07200 PF00534 Glycosyl transferases group 1 LIT32_07215 PF02602 Uroporphyrinogen-III synthase HemD LIT32_07220 PF00696 Amino acid kinase family LIT32_07220 PF01472 PUA domain LIT32_07225 PF00171 Aldehyde dehydrogenase family LIT32_07240 PF05656 Protein of unknown function (DUF805) LIT32_07245 PF01638 HxlR-like helix-turn-helix LIT32_07250 PF07690 Major Facilitator Superfamily LIT32_07255 PF00248 Aldo/keto reductase family LIT32_07260 PF00196 Bacterial regulatory proteins, luxR family LIT32_07260 PF17874 MalT-like TPR region LIT32_07270 PF01757 Acyltransferase family LIT32_07300 PF00873 AcrB/AcrD/AcrF family LIT32_07305 PF06906 Protein of unknown function (DUF1272) LIT32_07325 PF01368 DHH family LIT32_07325 PF02272 DHHA1 domain LIT32_07330 PF00145 C-5 cytosine-specific DNA methylase LIT32_07330 PF01381 Helix-turn-helix LIT32_07340 PF07728 AAA domain (dynein-related subfamily) LIT32_07345 PF09563 LlaJI restriction endonuclease LIT32_07375 PF13302 Acetyltransferase (GNAT) domain LIT32_07380 PF00583 Acetyltransferase (GNAT) family LIT32_07410 PF07690 Major Facilitator Superfamily LIT32_07420 PF00324 Amino acid permease LIT32_07425 PF05067 Manganese containing catalase LIT32_07430 PF17770 Ribonuclease J C-terminal domain LIT32_07430 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT32_07430 PF00753 Metallo-beta-lactamase superfamily LIT32_07450 PF08892 YqcI/YcgG family LIT32_07455 PF01810 LysE type translocator LIT32_07460 PF00892 EamA-like transporter family LIT32_07465 PF01638 HxlR-like helix-turn-helix LIT32_07470 PF02525 Flavodoxin-like fold LIT32_07480 PF04892 VanZ like family LIT32_07500 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIT32_07500 PF00753 Metallo-beta-lactamase superfamily LIT32_07505 PF13333 Integrase core domain LIT32_07505 PF13276 HTH-like domain LIT32_07505 PF00665 Integrase core domain LIT32_07535 PF04303 PrpF protein LIT32_07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_07540 PF03466 LysR substrate binding domain LIT32_07545 PF03600 Citrate transporter LIT32_07555 PF05145 Transition state regulatory protein AbrB LIT32_07560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_07560 PF03466 LysR substrate binding domain LIT32_07565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_07570 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT32_07570 PF00480 ROK family LIT32_07590 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07595 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_07610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_07615 PF04854 Protein of unknown function, DUF624 LIT32_07620 PF12832 MFS_1 like family LIT32_07640 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07645 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07660 PF07702 UTRA domain LIT32_07660 PF00392 Bacterial regulatory proteins, gntR family LIT32_07670 PF00005 ABC transporter LIT32_07675 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07680 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07695 PF05861 Bacterial phosphonate metabolism protein (PhnI) LIT32_07700 PF06007 Phosphonate metabolism protein PhnJ LIT32_07705 PF00005 ABC transporter LIT32_07710 PF07969 Amidohydrolase family LIT32_07715 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_07720 PF00005 ABC transporter LIT32_07725 PF02811 PHP domain LIT32_07730 PF00440 Bacterial regulatory proteins, tetR family LIT32_07735 PF13193 AMP-binding enzyme C-terminal domain LIT32_07735 PF00501 AMP-binding enzyme LIT32_07740 PF07690 Major Facilitator Superfamily LIT32_07740 PF00083 Sugar (and other) transporter LIT32_07750 PF05163 DinB family LIT32_07755 PF00557 Metallopeptidase family M24 LIT32_07765 PF00574 Clp protease LIT32_07780 PF04542 Sigma-70 region 2 LIT32_07780 PF08281 Sigma-70, region 4 LIT32_07795 PF01177 Asp/Glu/Hydantoin racemase LIT32_07805 PF03358 NADPH-dependent FMN reductase LIT32_07810 PF10055 Uncharacterized small protein (DUF2292) LIT32_07815 PF00296 Luciferase-like monooxygenase LIT32_07820 PF00005 ABC transporter LIT32_07825 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07830 PF00296 Luciferase-like monooxygenase LIT32_07835 PF09084 NMT1/THI5 like LIT32_07870 PF00005 ABC transporter LIT32_07875 PF12679 ABC-2 family transporter protein LIT32_07880 PF01740 STAS domain LIT32_07895 PF00296 Luciferase-like monooxygenase LIT32_07900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIT32_07915 PF10282 Lactonase, 7-bladed beta-propeller LIT32_07920 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_07925 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_07930 PF00005 ABC transporter LIT32_07935 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LIT32_07935 PF01740 STAS domain LIT32_07940 PF13039 Protein of unknown function (DUF3900) LIT32_07940 PF13037 Domain of unknown function (DUF3898) LIT32_07945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_07945 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_07945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_07955 PF02954 Bacterial regulatory protein, Fis family LIT32_07955 PF00158 Sigma-54 interaction domain LIT32_07955 PF00989 PAS fold LIT32_07960 PF04238 Protein of unknown function (DUF420) LIT32_07975 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LIT32_07975 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT32_07980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_07980 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_07980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_07985 PF07690 Major Facilitator Superfamily LIT32_07990 PF13193 AMP-binding enzyme C-terminal domain LIT32_07990 PF00501 AMP-binding enzyme LIT32_07995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT32_07995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT32_08000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT32_08000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT32_08005 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_08010 PF02803 Thiolase, C-terminal domain LIT32_08010 PF00108 Thiolase, N-terminal domain LIT32_08020 PF00378 Enoyl-CoA hydratase/isomerase LIT32_08030 PF04951 D-aminopeptidase LIT32_08035 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_08040 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_08040 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_08045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_08045 PF00005 ABC transporter LIT32_08050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_08055 PF02016 LD-carboxypeptidase N-terminal domain LIT32_08055 PF17676 LD-carboxypeptidase C-terminal domain LIT32_08060 PF13378 Enolase C-terminal domain-like LIT32_08060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT32_08065 PF00877 NlpC/P60 family LIT32_08070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_08070 PF00005 ABC transporter LIT32_08090 PF07690 Major Facilitator Superfamily LIT32_08095 PF00512 His Kinase A (phospho-acceptor) domain LIT32_08095 PF00989 PAS fold LIT32_08095 PF08447 PAS fold LIT32_08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_08105 PF00356 Bacterial regulatory proteins, lacI family LIT32_08110 PF16657 Maltogenic Amylase, C-terminal domain LIT32_08110 PF02903 Alpha amylase, N-terminal ig-like domain LIT32_08110 PF00128 Alpha amylase, catalytic domain LIT32_08115 PF05343 M42 glutamyl aminopeptidase LIT32_08120 PF17936 Bacterial Ig domain LIT32_08120 PF00082 Subtilase family LIT32_08130 PF00571 CBS domain LIT32_08130 PF00005 ABC transporter LIT32_08135 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LIT32_08140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_08140 PF00874 PRD domain LIT32_08140 PF05043 Mga helix-turn-helix domain LIT32_08140 PF08279 HTH domain LIT32_08145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_08145 PF02378 Phosphotransferase system, EIIC LIT32_08145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_08150 PF01238 Phosphomannose isomerase type I LIT32_08160 PF01810 LysE type translocator LIT32_08165 PF08141 Small acid-soluble spore protein H family LIT32_08200 PF01734 Patatin-like phospholipase LIT32_08210 PF07662 Na+ dependent nucleoside transporter C-terminus LIT32_08210 PF01773 Na+ dependent nucleoside transporter N-terminus LIT32_08220 PF00005 ABC transporter LIT32_08225 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_08230 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_08245 PF16242 Pyridoxamine 5'-phosphate oxidase like LIT32_08250 PF01565 FAD binding domain LIT32_08255 PF07690 Major Facilitator Superfamily LIT32_08275 PF00367 phosphotransferase system, EIIB LIT32_08275 PF02378 Phosphotransferase system, EIIC LIT32_08280 PF01979 Amidohydrolase family LIT32_08285 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LIT32_08290 PF00392 Bacterial regulatory proteins, gntR family LIT32_08290 PF07702 UTRA domain LIT32_08295 PF01380 SIS domain LIT32_08300 PF00561 alpha/beta hydrolase fold LIT32_08305 PF00313 'Cold-shock' DNA-binding domain LIT32_08310 PF08274 PhnA Zinc-Ribbon LIT32_08310 PF03831 PhnA domain LIT32_08315 PF01266 FAD dependent oxidoreductase LIT32_08315 PF00355 Rieske [2Fe-2S] domain LIT32_08320 PF00005 ABC transporter LIT32_08320 PF16326 ABC transporter C-terminal domain LIT32_08320 PF12848 ABC transporter LIT32_08330 PF00005 ABC transporter LIT32_08330 PF09383 NIL domain LIT32_08335 PF02653 Branched-chain amino acid transport system / permease component LIT32_08350 PF00392 Bacterial regulatory proteins, gntR family LIT32_08350 PF07729 FCD domain LIT32_08355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LIT32_08355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIT32_08365 PF02447 GntP family permease LIT32_08385 PF00082 Subtilase family LIT32_08395 PF00953 Glycosyl transferase family 4 LIT32_08395 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LIT32_08405 PF00171 Aldehyde dehydrogenase family LIT32_08410 PF02342 TerD domain LIT32_08415 PF10138 vWA found in TerF C terminus LIT32_08420 PF01380 SIS domain LIT32_08425 PF01380 SIS domain LIT32_08425 PF01418 Helix-turn-helix domain, rpiR family LIT32_08430 PF00367 phosphotransferase system, EIIB LIT32_08430 PF02378 Phosphotransferase system, EIIC LIT32_08440 PF00144 Beta-lactamase LIT32_08445 PF01915 Glycosyl hydrolase family 3 C-terminal domain LIT32_08445 PF00933 Glycosyl hydrolase family 3 N terminal domain LIT32_08455 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_08460 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_08465 PF00672 HAMP domain LIT32_08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_08465 PF06580 Histidine kinase LIT32_08465 PF02743 Cache domain LIT32_08470 PF12833 Helix-turn-helix domain LIT32_08485 PF04854 Protein of unknown function, DUF624 LIT32_08495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_08495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_08505 PF01740 STAS domain LIT32_08505 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LIT32_08510 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_08515 PF00486 Transcriptional regulatory protein, C terminal LIT32_08515 PF00072 Response regulator receiver domain LIT32_08520 PF00512 His Kinase A (phospho-acceptor) domain LIT32_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_08520 PF00672 HAMP domain LIT32_08540 PF15975 Flotillin LIT32_08540 PF01145 SPFH domain / Band 7 family LIT32_08550 PF05651 Putative sugar diacid recognition LIT32_08550 PF17853 GGDEF-like domain LIT32_08550 PF13556 PucR C-terminal helix-turn-helix domain LIT32_08555 PF02447 GntP family permease LIT32_08560 PF02595 Glycerate kinase family LIT32_08565 PF00486 Transcriptional regulatory protein, C terminal LIT32_08565 PF00072 Response regulator receiver domain LIT32_08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_08570 PF00512 His Kinase A (phospho-acceptor) domain LIT32_08570 PF00672 HAMP domain LIT32_08575 PF00005 ABC transporter LIT32_08600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_08600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_08605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_08605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_08610 PF01261 Xylose isomerase-like TIM barrel LIT32_08620 PF00356 Bacterial regulatory proteins, lacI family LIT32_08655 PF01047 MarR family LIT32_08660 PF02566 OsmC-like protein LIT32_08665 PF05922 Peptidase inhibitor I9 LIT32_08665 PF00082 Subtilase family LIT32_08670 PF18801 response regulator aspartate phosphatase H, N terminal LIT32_08680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT32_08680 PF00672 HAMP domain LIT32_08680 PF02743 Cache domain LIT32_08685 PF13411 MerR HTH family regulatory protein LIT32_08705 PF12804 MobA-like NTP transferase domain LIT32_08710 PF01047 MarR family LIT32_08725 PF01068 ATP dependent DNA ligase domain LIT32_08730 PF08645 Polynucleotide kinase 3 phosphatase LIT32_08735 PF02735 Ku70/Ku80 beta-barrel domain LIT32_08740 PF00171 Aldehyde dehydrogenase family LIT32_08745 PF02673 Bacitracin resistance protein BacA LIT32_08750 PF09335 SNARE associated Golgi protein LIT32_08755 PF04542 Sigma-70 region 2 LIT32_08760 PF12791 Anti-sigma factor N-terminus LIT32_08765 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT32_08770 PF01266 FAD dependent oxidoreductase LIT32_08770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LIT32_08775 PF08876 Domain of unknown function (DUF1836) LIT32_08780 PF01435 Peptidase family M48 LIT32_08785 PF02386 Cation transport protein LIT32_08790 PF00905 Penicillin binding protein transpeptidase domain LIT32_08790 PF03717 Penicillin-binding Protein dimerisation domain LIT32_08790 PF05223 NTF2-like N-terminal transpeptidase domain LIT32_08795 PF03816 Cell envelope-related transcriptional attenuator domain LIT32_08800 PF00746 LPXTG cell wall anchor motif LIT32_08800 PF02872 5'-nucleotidase, C-terminal domain LIT32_08800 PF00565 Staphylococcal nuclease homologue LIT32_08800 PF00149 Calcineurin-like phosphoesterase LIT32_08830 PF01757 Acyltransferase family LIT32_08835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_08835 PF00989 PAS fold LIT32_08835 PF13188 PAS domain LIT32_08835 PF13426 PAS domain LIT32_08835 PF00512 His Kinase A (phospho-acceptor) domain LIT32_08840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIT32_08840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIT32_08845 PF03301 Tryptophan 2,3-dioxygenase LIT32_08860 PF02653 Branched-chain amino acid transport system / permease component LIT32_08865 PF00005 ABC transporter LIT32_08870 PF13407 Periplasmic binding protein domain LIT32_08875 PF01008 Initiation factor 2 subunit family LIT32_08880 PF01636 Phosphotransferase enzyme family LIT32_08885 PF00795 Carbon-nitrogen hydrolase LIT32_08890 PF00155 Aminotransferase class I and II LIT32_08895 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LIT32_08895 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LIT32_08905 PF00596 Class II Aldolase and Adducin N-terminal domain LIT32_08910 PF03079 ARD/ARD' family LIT32_08925 PF02535 ZIP Zinc transporter LIT32_08930 PF00248 Aldo/keto reductase family LIT32_08935 PF00512 His Kinase A (phospho-acceptor) domain LIT32_08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_08935 PF02743 Cache domain LIT32_08940 PF00149 Calcineurin-like phosphoesterase LIT32_08940 PF02872 5'-nucleotidase, C-terminal domain LIT32_08945 PF01047 MarR family LIT32_08950 PF00691 OmpA family LIT32_08950 PF13677 Membrane MotB of proton-channel complex MotA/MotB LIT32_08955 PF01618 MotA/TolQ/ExbB proton channel family LIT32_08970 PF07724 AAA domain (Cdc48 subfamily) LIT32_08970 PF10431 C-terminal, D2-small domain, of ClpB protein LIT32_08970 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_08970 PF17871 AAA lid domain LIT32_08985 PF03471 Transporter associated domain LIT32_08985 PF01595 Cyclin M transmembrane N-terminal domain LIT32_08985 PF00571 CBS domain LIT32_09000 PF06508 Queuosine biosynthesis protein QueC LIT32_09005 PF01242 6-pyruvoyl tetrahydropterin synthase LIT32_09010 PF04055 Radical SAM superfamily LIT32_09015 PF14489 QueF-like protein LIT32_09020 PF00313 'Cold-shock' DNA-binding domain LIT32_09035 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT32_09040 PF07451 Stage V sporulation protein AD (SpoVAD) LIT32_09045 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT32_09055 PF04239 Protein of unknown function (DUF421) LIT32_09060 PF01569 PAP2 superfamily LIT32_09080 PF02586 SOS response associated peptidase (SRAP) LIT32_09085 PF02463 RecF/RecN/SMC N terminal domain LIT32_09090 PF06725 3D domain LIT32_09090 PF03990 G5-linked-Ubiquitin-like domain LIT32_09090 PF07501 G5 domain LIT32_09095 PF00814 Glycoprotease family LIT32_09095 PF00583 Acetyltransferase (GNAT) family LIT32_09100 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LIT32_09105 PF01734 Patatin-like phospholipase LIT32_09125 PF07486 Cell Wall Hydrolase LIT32_09130 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_09135 PF03845 Spore germination protein LIT32_09140 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_09145 PF01943 Polysaccharide biosynthesis protein LIT32_09150 PF01773 Na+ dependent nucleoside transporter N-terminus LIT32_09150 PF07662 Na+ dependent nucleoside transporter C-terminus LIT32_09150 PF07670 Nucleoside recognition LIT32_09155 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_09180 PF14040 Deoxyribonuclease NucA/NucB LIT32_09185 PF11033 Competence protein J (ComJ) LIT32_09215 PF01321 Creatinase/Prolidase N-terminal domain LIT32_09215 PF00557 Metallopeptidase family M24 LIT32_09220 PF05901 Excalibur calcium-binding domain LIT32_09220 PF00565 Staphylococcal nuclease homologue LIT32_09255 PF16916 Dimerisation domain of Zinc Transporter LIT32_09255 PF01545 Cation efflux family LIT32_09270 PF03707 Bacterial signalling protein N terminal repeat LIT32_09270 PF00990 Diguanylate cyclase, GGDEF domain LIT32_09270 PF00563 EAL domain LIT32_09290 PF03123 CAT RNA binding domain LIT32_09290 PF00874 PRD domain LIT32_09295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT32_09295 PF00367 phosphotransferase system, EIIB LIT32_09295 PF02378 Phosphotransferase system, EIIC LIT32_09300 PF00381 PTS HPr component phosphorylation site LIT32_09305 PF02896 PEP-utilising enzyme, TIM barrel domain LIT32_09305 PF05524 PEP-utilising enzyme, N-terminal LIT32_09305 PF00391 PEP-utilising enzyme, mobile domain LIT32_09310 PF08447 PAS fold LIT32_09310 PF00989 PAS fold LIT32_09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_09310 PF00512 His Kinase A (phospho-acceptor) domain LIT32_09315 PF11132 Transcriptional regulator protein (SplA) LIT32_09325 PF00106 short chain dehydrogenase LIT32_09340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIT32_09340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LIT32_09345 PF00583 Acetyltransferase (GNAT) family LIT32_09350 PF00188 Cysteine-rich secretory protein family LIT32_09355 PF03717 Penicillin-binding Protein dimerisation domain LIT32_09355 PF00905 Penicillin binding protein transpeptidase domain LIT32_09360 PF02627 Carboxymuconolactone decarboxylase family LIT32_09370 PF08447 PAS fold LIT32_09370 PF00989 PAS fold LIT32_09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_09370 PF00512 His Kinase A (phospho-acceptor) domain LIT32_09375 PF00155 Aminotransferase class I and II LIT32_09380 PF01544 CorA-like Mg2+ transporter protein LIT32_09415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_09415 PF00512 His Kinase A (phospho-acceptor) domain LIT32_09425 PF00860 Permease family LIT32_09435 PF01584 CheW-like domain LIT32_09435 PF00072 Response regulator receiver domain LIT32_09440 PF04607 Region found in RelA / SpoT proteins LIT32_09445 PF14177 YkyB-like protein LIT32_09450 PF01966 HD domain LIT32_09450 PF00672 HAMP domain LIT32_09455 PF07690 Major Facilitator Superfamily LIT32_09460 PF01476 LysM domain LIT32_09460 PF03734 L,D-transpeptidase catalytic domain LIT32_09470 PF13089 Polyphosphate kinase N-terminal domain LIT32_09470 PF13090 Polyphosphate kinase C-terminal domain 2 LIT32_09470 PF02503 Polyphosphate kinase middle domain LIT32_09470 PF17941 Polyphosphate kinase C-terminal domain 1 LIT32_09475 PF00563 EAL domain LIT32_09475 PF00990 Diguanylate cyclase, GGDEF domain LIT32_09475 PF03707 Bacterial signalling protein N terminal repeat LIT32_09480 PF00149 Calcineurin-like phosphoesterase LIT32_09480 PF10518 TAT (twin-arginine translocation) pathway signal sequence LIT32_09490 PF00563 EAL domain LIT32_09490 PF10388 EAL-domain associated signalling protein domain LIT32_09520 PF08796 Protein of unknown function (DUF1797) LIT32_09530 PF04308 Ribonuclease H-like LIT32_09535 PF14156 Antirepressor AbbA LIT32_09545 PF07690 Major Facilitator Superfamily LIT32_09555 PF01925 Sulfite exporter TauE/SafE LIT32_09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_09560 PF03466 LysR substrate binding domain LIT32_09565 PF00258 Flavodoxin LIT32_09575 PF00258 Flavodoxin LIT32_09580 PF14602 Hexapeptide repeat of succinyl-transferase LIT32_09580 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_09580 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LIT32_09585 PF01546 Peptidase family M20/M25/M40 LIT32_09585 PF07687 Peptidase dimerisation domain LIT32_09590 PF03698 Uncharacterised protein family (UPF0180) LIT32_09595 PF00924 Mechanosensitive ion channel LIT32_09600 PF10417 C-terminal domain of 1-Cys peroxiredoxin LIT32_09600 PF00578 AhpC/TSA family LIT32_09605 PF00578 AhpC/TSA family LIT32_09610 PF00313 'Cold-shock' DNA-binding domain LIT32_09630 PF00795 Carbon-nitrogen hydrolase LIT32_09635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_09635 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LIT32_09640 PF01180 Dihydroorotate dehydrogenase LIT32_09645 PF01979 Amidohydrolase family LIT32_09650 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LIT32_09660 PF17853 GGDEF-like domain LIT32_09660 PF13556 PucR C-terminal helix-turn-helix domain LIT32_09660 PF05651 Putative sugar diacid recognition LIT32_09665 PF00171 Aldehyde dehydrogenase family LIT32_09670 PF00202 Aminotransferase class-III LIT32_09675 PF00455 DeoR C terminal sensor domain LIT32_09675 PF08220 DeoR-like helix-turn-helix domain LIT32_09680 PF12464 Maltose acetyltransferase LIT32_09680 PF14602 Hexapeptide repeat of succinyl-transferase LIT32_09695 PF04229 GrpB protein LIT32_09700 PF03358 NADPH-dependent FMN reductase LIT32_09705 PF00664 ABC transporter transmembrane region LIT32_09705 PF00005 ABC transporter LIT32_09710 PF00005 ABC transporter LIT32_09710 PF00664 ABC transporter transmembrane region LIT32_09715 PF04893 Yip1 domain LIT32_09720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIT32_09725 PF00005 ABC transporter LIT32_09730 PF02687 FtsX-like permease family LIT32_09730 PF12704 MacB-like periplasmic core domain LIT32_09745 PF10502 Signal peptidase, peptidase S26 LIT32_09760 PF00005 ABC transporter LIT32_09760 PF12848 ABC transporter LIT32_09770 PF02558 Ketopantoate reductase PanE/ApbA LIT32_09770 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIT32_09775 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT32_09775 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT32_09780 PF02645 Uncharacterised protein, DegV family COG1307 LIT32_09785 PF02073 Thermophilic metalloprotease (M29) LIT32_09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_09790 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LIT32_09790 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_09800 PF00005 ABC transporter LIT32_09800 PF12848 ABC transporter LIT32_09805 PF04294 VanW like protein LIT32_09815 PF03061 Thioesterase superfamily LIT32_09825 PF00989 PAS fold LIT32_09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_09825 PF00512 His Kinase A (phospho-acceptor) domain LIT32_09830 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LIT32_09835 PF01654 Cytochrome bd terminal oxidase subunit I LIT32_09840 PF02322 Cytochrome bd terminal oxidase subunit II LIT32_09845 PF02254 TrkA-N domain LIT32_09845 PF02080 TrkA-C domain LIT32_09850 PF13382 Adenine deaminase C-terminal domain LIT32_09850 PF01979 Amidohydrolase family LIT32_09860 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT32_09860 PF17770 Ribonuclease J C-terminal domain LIT32_09860 PF00753 Metallo-beta-lactamase superfamily LIT32_09865 PF07288 Protein of unknown function (DUF1447) LIT32_09875 PF01327 Polypeptide deformylase LIT32_09880 PF09680 Family of unknown function LIT32_09890 PF00676 Dehydrogenase E1 component LIT32_09895 PF02780 Transketolase, C-terminal domain LIT32_09895 PF02779 Transketolase, pyrimidine binding domain LIT32_09900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIT32_09900 PF00364 Biotin-requiring enzyme LIT32_09900 PF02817 e3 binding domain LIT32_09905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT32_09905 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_09940 PF01276 Orn/Lys/Arg decarboxylase, major domain LIT32_09940 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LIT32_09945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_09945 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_09945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_09955 PF02803 Thiolase, C-terminal domain LIT32_09955 PF00108 Thiolase, N-terminal domain LIT32_09965 PF13193 AMP-binding enzyme C-terminal domain LIT32_09965 PF00501 AMP-binding enzyme LIT32_09970 PF00440 Bacterial regulatory proteins, tetR family LIT32_09970 PF18665 Tetracyclin repressor-like, C-terminal domain LIT32_09975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT32_09975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT32_09980 PF00378 Enoyl-CoA hydratase/isomerase LIT32_09995 PF04029 2-phosphosulpholactate phosphatase LIT32_10000 PF00106 short chain dehydrogenase LIT32_10005 PF00378 Enoyl-CoA hydratase/isomerase LIT32_10010 PF00107 Zinc-binding dehydrogenase LIT32_10010 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_10015 PF02653 Branched-chain amino acid transport system / permease component LIT32_10020 PF02653 Branched-chain amino acid transport system / permease component LIT32_10020 PF11862 Domain of unknown function (DUF3382) LIT32_10025 PF12399 Branched-chain amino acid ATP-binding cassette transporter LIT32_10025 PF00005 ABC transporter LIT32_10030 PF00005 ABC transporter LIT32_10040 PF00501 AMP-binding enzyme LIT32_10040 PF13193 AMP-binding enzyme C-terminal domain LIT32_10045 PF02126 Phosphotriesterase family LIT32_10050 PF03060 Nitronate monooxygenase LIT32_10055 PF05256 Uncharacterised protein family (UPF0223) LIT32_10060 PF06335 Protein of unknown function (DUF1054) LIT32_10070 PF00459 Inositol monophosphatase family LIT32_10075 PF00583 Acetyltransferase (GNAT) family LIT32_10085 PF00679 Elongation factor G C-terminus LIT32_10085 PF14492 Elongation Factor G, domain II LIT32_10085 PF00009 Elongation factor Tu GTP binding domain LIT32_10085 PF03144 Elongation factor Tu domain 2 LIT32_10090 PF14036 YlaH-like protein LIT32_10105 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LIT32_10115 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT32_10120 PF13638 PIN domain LIT32_10120 PF02562 PhoH-like protein LIT32_10130 PF04960 Glutaminase LIT32_10135 PF07408 Protein of unknown function (DUF1507) LIT32_10140 PF01098 Cell cycle protein LIT32_10145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT32_10145 PF02436 Conserved carboxylase domain LIT32_10145 PF00289 Biotin carboxylase, N-terminal domain LIT32_10145 PF02785 Biotin carboxylase C-terminal domain LIT32_10145 PF00682 HMGL-like LIT32_10145 PF00364 Biotin-requiring enzyme LIT32_10150 PF02628 Cytochrome oxidase assembly protein LIT32_10155 PF01040 UbiA prenyltransferase family LIT32_10160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LIT32_10160 PF00034 Cytochrome c LIT32_10160 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LIT32_10165 PF00115 Cytochrome C and Quinol oxidase polypeptide I LIT32_10170 PF00510 Cytochrome c oxidase subunit III LIT32_10175 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LIT32_10180 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LIT32_10200 PF01594 AI-2E family transporter LIT32_10205 PF08868 YugN-like family LIT32_10210 PF00571 CBS domain LIT32_10215 PF14504 CAP-associated N-terminal LIT32_10215 PF00188 Cysteine-rich secretory protein family LIT32_10225 PF14071 Putative coat protein LIT32_10230 PF14003 YlbE-like protein LIT32_10240 PF06133 Control of competence regulator ComK, YlbF/YmcA LIT32_10245 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LIT32_10260 PF01467 Cytidylyltransferase-like LIT32_10265 PF07670 Nucleoside recognition LIT32_10270 PF01734 Patatin-like phospholipase LIT32_10275 PF05362 Lon protease (S16) C-terminal proteolytic domain LIT32_10275 PF13180 PDZ domain LIT32_10280 PF05636 HIGH Nucleotidyl Transferase LIT32_10285 PF02620 Large ribosomal RNA subunit accumulation protein YceD LIT32_10290 PF01783 Ribosomal L32p protein family LIT32_10295 PF00378 Enoyl-CoA hydratase/isomerase LIT32_10305 PF00583 Acetyltransferase (GNAT) family LIT32_10310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT32_10310 PF02785 Biotin carboxylase C-terminal domain LIT32_10310 PF00289 Biotin carboxylase, N-terminal domain LIT32_10315 PF00364 Biotin-requiring enzyme LIT32_10320 PF01039 Carboxyl transferase domain LIT32_10325 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIT32_10325 PF02558 Ketopantoate reductase PanE/ApbA LIT32_10335 PF10079 Bacillithiol biosynthesis BshC LIT32_10340 PF02381 MraZ protein, putative antitoxin-like LIT32_10345 PF01795 MraW methylase family LIT32_10350 PF04977 Septum formation initiator LIT32_10355 PF03793 PASTA domain LIT32_10355 PF00905 Penicillin binding protein transpeptidase domain LIT32_10355 PF03717 Penicillin-binding Protein dimerisation domain LIT32_10360 PF00905 Penicillin binding protein transpeptidase domain LIT32_10360 PF03717 Penicillin-binding Protein dimerisation domain LIT32_10360 PF03793 PASTA domain LIT32_10365 PF01225 Mur ligase family, catalytic domain LIT32_10365 PF02875 Mur ligase family, glutamate ligase domain LIT32_10365 PF08245 Mur ligase middle domain LIT32_10370 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LIT32_10370 PF00953 Glycosyl transferase family 4 LIT32_10375 PF02875 Mur ligase family, glutamate ligase domain LIT32_10375 PF08245 Mur ligase middle domain LIT32_10380 PF01098 Cell cycle protein LIT32_10385 PF04101 Glycosyltransferase family 28 C-terminal domain LIT32_10385 PF03033 Glycosyltransferase family 28 N-terminal domain LIT32_10390 PF01565 FAD binding domain LIT32_10390 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LIT32_10395 PF08478 POTRA domain, FtsQ-type LIT32_10400 PF05949 Bacterial protein of unknown function (DUF881) LIT32_10405 PF05949 Bacterial protein of unknown function (DUF881) LIT32_10410 PF06947 Protein of unknown function (DUF1290) LIT32_10415 PF02491 SHS2 domain inserted in FTSA LIT32_10420 PF00091 Tubulin/FtsZ family, GTPase domain LIT32_10420 PF12327 FtsZ family, C-terminal domain LIT32_10425 PF05922 Peptidase inhibitor I9 LIT32_10425 PF00082 Subtilase family LIT32_10430 PF03419 Sporulation factor SpoIIGA LIT32_10435 PF04545 Sigma-70, region 4 LIT32_10435 PF04542 Sigma-70 region 2 LIT32_10440 PF04545 Sigma-70, region 4 LIT32_10440 PF04539 Sigma-70 region 3 LIT32_10440 PF04542 Sigma-70 region 2 LIT32_10445 PF09323 Domain of unknown function (DUF1980) LIT32_10450 PF03773 Predicted permease LIT32_10455 PF05239 PRC-barrel domain LIT32_10460 PF02578 Multi-copper polyphenol oxidoreductase laccase LIT32_10465 PF01168 Alanine racemase, N-terminal domain LIT32_10470 PF04472 Cell division protein SepF LIT32_10475 PF02325 YGGT family LIT32_10480 PF01479 S4 domain LIT32_10480 PF17774 Putative RNA-binding domain in YlmH LIT32_10485 PF05103 DivIVA protein LIT32_10490 PF08264 Anticodon-binding domain of tRNA LIT32_10490 PF06827 Zinc finger found in FPG and IleRS LIT32_10490 PF00133 tRNA synthetases class I (I, L, M and V) LIT32_10495 PF01258 Prokaryotic dksA/traR C4-type zinc finger LIT32_10500 PF01252 Signal peptidase (SPase) II LIT32_10505 PF00849 RNA pseudouridylate synthase LIT32_10505 PF01479 S4 domain LIT32_10510 PF00156 Phosphoribosyl transferase domain LIT32_10515 PF00860 Permease family LIT32_10520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIT32_10520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIT32_10525 PF01979 Amidohydrolase family LIT32_10530 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LIT32_10530 PF00117 Glutamine amidotransferase class-I LIT32_10535 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LIT32_10535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT32_10535 PF02142 MGS-like domain LIT32_10540 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LIT32_10545 PF01180 Dihydroorotate dehydrogenase LIT32_10550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIT32_10555 PF00156 Phosphoribosyl transferase domain LIT32_10565 PF01507 Phosphoadenosine phosphosulfate reductase family LIT32_10570 PF01384 Phosphate transporter family LIT32_10575 PF01747 ATP-sulfurylase LIT32_10575 PF14306 PUA-like domain LIT32_10585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_10590 PF01903 CbiX LIT32_10595 PF14824 Sirohaem biosynthesis protein central LIT32_10600 PF05670 NFACT protein RNA binding domain LIT32_10605 PF00689 Cation transporting ATPase, C-terminus LIT32_10605 PF00690 Cation transporter/ATPase, N-terminus LIT32_10610 PF08340 Domain of unknown function (DUF1732) LIT32_10610 PF03755 YicC-like family, N-terminal region LIT32_10615 PF04025 Domain of unknown function (DUF370) LIT32_10620 PF00625 Guanylate kinase LIT32_10625 PF01192 RNA polymerase Rpb6 LIT32_10630 PF02441 Flavoprotein LIT32_10630 PF04127 DNA / pantothenate metabolism flavoprotein LIT32_10635 PF00271 Helicase conserved C-terminal domain LIT32_10635 PF17764 3′ DNA-binding domain (3′BD) LIT32_10635 PF18074 Primosomal protein N C-terminal domain LIT32_10635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LIT32_10635 PF04851 Type III restriction enzyme, res subunit LIT32_10640 PF01327 Polypeptide deformylase LIT32_10645 PF02911 Formyl transferase, C-terminal domain LIT32_10645 PF00551 Formyl transferase LIT32_10650 PF01189 16S rRNA methyltransferase RsmB/F LIT32_10650 PF01029 NusB family LIT32_10655 PF04055 Radical SAM superfamily LIT32_10665 PF00069 Protein kinase domain LIT32_10665 PF03793 PASTA domain LIT32_10670 PF16745 RsgA N-terminal domain LIT32_10670 PF03193 RsgA GTPase LIT32_10675 PF00834 Ribulose-phosphate 3 epimerase family LIT32_10680 PF04263 Thiamin pyrophosphokinase, catalytic domain LIT32_10680 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LIT32_10685 PF08183 Stage V sporulation protein family LIT32_10690 PF00830 Ribosomal L28 family LIT32_10695 PF03780 Asp23 family, cell envelope-related function LIT32_10700 PF13684 Dihydroxyacetone kinase family LIT32_10700 PF02734 DAK2 domain LIT32_10705 PF01842 ACT domain LIT32_10705 PF03315 Serine dehydratase beta chain LIT32_10710 PF03313 Serine dehydratase alpha chain LIT32_10715 PF17191 RecG wedge domain LIT32_10715 PF00270 DEAD/DEAH box helicase LIT32_10715 PF00271 Helicase conserved C-terminal domain LIT32_10720 PF08279 HTH domain LIT32_10720 PF01575 MaoC like domain LIT32_10725 PF02504 Fatty acid synthesis protein LIT32_10730 PF00698 Acyl transferase domain LIT32_10740 PF00550 Phosphopantetheine attachment site LIT32_10745 PF14622 Ribonuclease-III-like LIT32_10745 PF00035 Double-stranded RNA binding motif LIT32_10750 PF02463 RecF/RecN/SMC N terminal domain LIT32_10750 PF06470 SMC proteins Flexible Hinge Domain LIT32_10755 PF00448 SRP54-type protein, GTPase domain LIT32_10755 PF02881 SRP54-type protein, helical bundle domain LIT32_10760 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LIT32_10765 PF02978 Signal peptide binding domain LIT32_10765 PF02881 SRP54-type protein, helical bundle domain LIT32_10765 PF00448 SRP54-type protein, GTPase domain LIT32_10770 PF00886 Ribosomal protein S16 LIT32_10780 PF11068 YlqD protein LIT32_10785 PF05239 PRC-barrel domain LIT32_10785 PF01782 RimM N-terminal domain LIT32_10790 PF01746 tRNA (Guanine-1)-methyltransferase LIT32_10795 PF01245 Ribosomal protein L19 LIT32_10800 PF10502 Signal peptidase, peptidase S26 LIT32_10805 PF01926 50S ribosome-binding GTPase LIT32_10810 PF01351 Ribonuclease HII LIT32_10820 PF01312 FlhB HrpN YscU SpaS Family LIT32_10825 PF00549 CoA-ligase LIT32_10825 PF08442 ATP-grasp domain LIT32_10830 PF02629 CoA binding domain LIT32_10830 PF00549 CoA-ligase LIT32_10835 PF02481 DNA recombination-mediator protein A LIT32_10840 PF01396 Topoisomerase DNA binding C4 zinc finger LIT32_10840 PF01751 Toprim domain LIT32_10840 PF01131 DNA topoisomerase LIT32_10845 PF01134 Glucose inhibited division protein A LIT32_10850 PF02899 Phage integrase, N-terminal SAM-like domain LIT32_10850 PF00589 Phage integrase family LIT32_10855 PF00227 Proteasome subunit LIT32_10860 PF10431 C-terminal, D2-small domain, of ClpB protein LIT32_10860 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_10860 PF07724 AAA domain (Cdc48 subfamily) LIT32_10865 PF08222 CodY helix-turn-helix domain LIT32_10865 PF06018 CodY GAF-like domain LIT32_10870 PF00460 Flagella basal body rod protein LIT32_10875 PF00460 Flagella basal body rod protein LIT32_10875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT32_10880 PF02049 Flagellar hook-basal body complex protein FliE LIT32_10885 PF01514 Secretory protein of YscJ/FliF family LIT32_10885 PF08345 Flagellar M-ring protein C-terminal LIT32_10890 PF01706 FliG C-terminal domain LIT32_10890 PF14841 FliG middle domain LIT32_10890 PF14842 FliG N-terminal domain LIT32_10900 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIT32_10900 PF18269 T3SS EscN ATPase C-terminal domain LIT32_10900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT32_10905 PF02050 Flagellar FliJ protein LIT32_10915 PF02120 Flagellar hook-length control protein FliK LIT32_10920 PF03963 Flagellar hook capping protein - N-terminal region LIT32_10930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT32_10930 PF00460 Flagella basal body rod protein LIT32_10935 PF06289 Flagellar and Swarming motility proteins LIT32_10940 PF03748 Flagellar basal body-associated protein FliL LIT32_10945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LIT32_10945 PF02154 Flagellar motor switch protein FliM LIT32_10950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LIT32_10950 PF04509 CheC-like family LIT32_10955 PF00072 Response regulator receiver domain LIT32_10960 PF04347 Flagellar biosynthesis protein, FliO LIT32_10965 PF00813 FliP family LIT32_10970 PF01313 Bacterial export proteins, family 3 LIT32_10975 PF01311 Bacterial export proteins, family 1 LIT32_10980 PF01312 FlhB HrpN YscU SpaS Family LIT32_10985 PF00771 FHIPEP family LIT32_10990 PF00448 SRP54-type protein, GTPase domain LIT32_10995 PF10609 NUBPL iron-transfer P-loop NTPase LIT32_11000 PF00072 Response regulator receiver domain LIT32_11000 PF01339 CheB methylesterase LIT32_11005 PF01584 CheW-like domain LIT32_11005 PF07194 P2 response regulator binding domain LIT32_11005 PF01627 Hpt domain LIT32_11005 PF02895 Signal transducing histidine kinase, homodimeric domain LIT32_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_11010 PF01584 CheW-like domain LIT32_11015 PF04509 CheC-like family LIT32_11020 PF03975 CheD chemotactic sensory transduction LIT32_11025 PF04545 Sigma-70, region 4 LIT32_11025 PF04542 Sigma-70 region 2 LIT32_11025 PF04539 Sigma-70 region 3 LIT32_11035 PF00318 Ribosomal protein S2 LIT32_11040 PF00889 Elongation factor TS LIT32_11045 PF00696 Amino acid kinase family LIT32_11050 PF01765 Ribosome recycling factor LIT32_11055 PF01255 Putative undecaprenyl diphosphate synthase LIT32_11065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LIT32_11065 PF13288 DXP reductoisomerase C-terminal domain LIT32_11065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LIT32_11070 PF17820 PDZ domain LIT32_11070 PF02163 Peptidase family M50 LIT32_11075 PF04073 Aminoacyl-tRNA editing domain LIT32_11075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT32_11075 PF03129 Anticodon binding domain LIT32_11080 PF14480 DNA polymerase III polC-type N-terminus I LIT32_11080 PF11490 DNA polymerase III polC-type N-terminus II LIT32_11080 PF00929 Exonuclease LIT32_11080 PF02811 PHP domain LIT32_11080 PF14579 Helix-hairpin-helix motif LIT32_11080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT32_11080 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT32_11085 PF17384 RimP C-terminal SH3 domain LIT32_11085 PF02576 RimP N-terminal domain LIT32_11090 PF00575 S1 RNA binding domain LIT32_11090 PF13184 NusA-like KH domain LIT32_11090 PF08529 NusA N-terminal domain LIT32_11095 PF04296 Protein of unknown function (DUF448) LIT32_11100 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LIT32_11105 PF04760 Translation initiation factor IF-2, N-terminal region LIT32_11105 PF11987 Translation-initiation factor 2 LIT32_11105 PF00009 Elongation factor Tu GTP binding domain LIT32_11110 PF04456 Protein of unknown function (DUF503) LIT32_11115 PF02033 Ribosome-binding factor A LIT32_11120 PF16198 tRNA pseudouridylate synthase B C-terminal domain LIT32_11120 PF01509 TruB family pseudouridylate synthase (N terminal domain) LIT32_11125 PF06574 FAD synthetase LIT32_11125 PF01687 Riboflavin kinase LIT32_11130 PF00312 Ribosomal protein S15 LIT32_11135 PF00013 KH domain LIT32_11135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LIT32_11135 PF01138 3' exoribonuclease family, domain 1 LIT32_11135 PF03725 3' exoribonuclease family, domain 2 LIT32_11135 PF00575 S1 RNA binding domain LIT32_11140 PF01522 Polysaccharide deacetylase LIT32_11145 PF00675 Insulinase (Peptidase family M16) LIT32_11145 PF05193 Peptidase M16 inactive domain LIT32_11150 PF05239 PRC-barrel domain LIT32_11155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIT32_11155 PF16924 Dipicolinate synthase subunit A N-terminal domain LIT32_11160 PF02441 Flavoprotein LIT32_11165 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIT32_11165 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIT32_11170 PF00696 Amino acid kinase family LIT32_11170 PF13840 ACT domain LIT32_11175 PF00701 Dihydrodipicolinate synthetase family LIT32_11180 PF00753 Metallo-beta-lactamase superfamily LIT32_11180 PF17770 Ribonuclease J C-terminal domain LIT32_11180 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT32_11185 PF00574 Clp protease LIT32_11190 PF14035 YlzJ-like protein LIT32_11195 PF09397 Ftsk gamma domain LIT32_11195 PF17854 FtsK alpha domain LIT32_11195 PF01580 FtsK/SpoIIIE family LIT32_11200 PF07702 UTRA domain LIT32_11200 PF00392 Bacterial regulatory proteins, gntR family LIT32_11205 PF02608 ABC transporter substrate-binding protein PnrA-like LIT32_11210 PF00005 ABC transporter LIT32_11215 PF02653 Branched-chain amino acid transport system / permease component LIT32_11220 PF02653 Branched-chain amino acid transport system / permease component LIT32_11230 PF05193 Peptidase M16 inactive domain LIT32_11235 PF00675 Insulinase (Peptidase family M16) LIT32_11235 PF05193 Peptidase M16 inactive domain LIT32_11245 PF11588 Protein of unknown function (DUF3243) LIT32_11250 PF11868 Protein of unknown function (DUF3388) LIT32_11255 PF13464 Domain of unknown function (DUF4115) LIT32_11260 PF01066 CDP-alcohol phosphatidyltransferase LIT32_11265 PF18146 Damage-inducible protein CinA KH domain LIT32_11265 PF00994 Probable molybdopterin binding domain LIT32_11265 PF02464 Competence-damaged protein LIT32_11270 PF00154 recA bacterial DNA recombination protein LIT32_11275 PF01966 HD domain LIT32_11275 PF00013 KH domain LIT32_11275 PF12072 Domain of unknown function (DUF3552) LIT32_11280 PF13277 YmdB-like protein LIT32_11285 PF04232 Stage V sporulation protein S (SpoVS) LIT32_11290 PF01244 Membrane dipeptidase (Peptidase family M19) LIT32_11300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT32_11305 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_11305 PF00107 Zinc-binding dehydrogenase LIT32_11310 PF00155 Aminotransferase class I and II LIT32_11315 PF00919 Uncharacterized protein family UPF0004 LIT32_11315 PF04055 Radical SAM superfamily LIT32_11315 PF01938 TRAM domain LIT32_11320 PF06133 Control of competence regulator ComK, YlbF/YmcA LIT32_11330 PF10628 Outer spore coat protein E (CotE) LIT32_11335 PF05190 MutS family domain IV LIT32_11335 PF05192 MutS domain III LIT32_11335 PF05188 MutS domain II LIT32_11335 PF00488 MutS domain V LIT32_11335 PF01624 MutS domain I LIT32_11340 PF01119 DNA mismatch repair protein, C-terminal domain LIT32_11340 PF08676 MutL C terminal dimerisation domain LIT32_11355 PF01593 Flavin containing amine oxidoreductase LIT32_11360 PF00175 Oxidoreductase NAD-binding domain LIT32_11360 PF00970 Oxidoreductase FAD-binding domain LIT32_11360 PF00042 Globin LIT32_11380 PF00398 Ribosomal RNA adenine dimethylase LIT32_11390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIT32_11390 PF00356 Bacterial regulatory proteins, lacI family LIT32_11475 PF00356 Bacterial regulatory proteins, lacI family LIT32_11485 PF01547 Bacterial extracellular solute-binding protein LIT32_11490 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_11495 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_11520 PF00005 ABC transporter LIT32_11540 PF06965 Na+/H+ antiporter 1 LIT32_11540 PF13462 Thioredoxin LIT32_11550 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_11555 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_11560 PF03845 Spore germination protein LIT32_11565 PF02567 Phenazine biosynthesis-like protein LIT32_11570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_11570 PF03466 LysR substrate binding domain LIT32_11575 PF01230 HIT domain LIT32_11580 PF00682 HMGL-like LIT32_11580 PF08502 LeuA allosteric (dimerisation) domain LIT32_11585 PF00561 alpha/beta hydrolase fold LIT32_11600 PF00072 Response regulator receiver domain LIT32_11600 PF00486 Transcriptional regulatory protein, C terminal LIT32_11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_11605 PF00512 His Kinase A (phospho-acceptor) domain LIT32_11610 PF02557 D-alanyl-D-alanine carboxypeptidase LIT32_11615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_11620 PF00072 Response regulator receiver domain LIT32_11620 PF00486 Transcriptional regulatory protein, C terminal LIT32_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_11630 PF00005 ABC transporter LIT32_11635 PF02687 FtsX-like permease family LIT32_11660 PF13460 NAD(P)H-binding LIT32_11670 PF11188 Protein of unknown function (DUF2975) LIT32_11675 PF13443 Cro/C1-type HTH DNA-binding domain LIT32_11680 PF05675 Protein of unknown function (DUF817) LIT32_11705 PF00583 Acetyltransferase (GNAT) family LIT32_11735 PF05163 DinB family LIT32_11740 PF04542 Sigma-70 region 2 LIT32_11740 PF08281 Sigma-70, region 4 LIT32_11755 PF13276 HTH-like domain LIT32_11755 PF00665 Integrase core domain LIT32_11755 PF13333 Integrase core domain LIT32_11760 PF13333 Integrase core domain LIT32_11760 PF00665 Integrase core domain LIT32_11760 PF13276 HTH-like domain LIT32_11780 PF00072 Response regulator receiver domain LIT32_11780 PF00486 Transcriptional regulatory protein, C terminal LIT32_11785 PF00672 HAMP domain LIT32_11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_11785 PF18698 Histidine kinase sensor domain LIT32_11785 PF00512 His Kinase A (phospho-acceptor) domain LIT32_11785 PF00989 PAS fold LIT32_11790 PF07563 Protein of unknown function (DUF1541) LIT32_11800 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT32_11815 PF01381 Helix-turn-helix LIT32_11840 PF08220 DeoR-like helix-turn-helix domain LIT32_11840 PF00455 DeoR C terminal sensor domain LIT32_11845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_11845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_11850 PF03928 Haem-degrading LIT32_11855 PF00356 Bacterial regulatory proteins, lacI family LIT32_11860 PF02502 Ribose/Galactose Isomerase LIT32_11865 PF00294 pfkB family carbohydrate kinase LIT32_11870 PF13416 Bacterial extracellular solute-binding protein LIT32_11875 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_11880 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_11885 PF04854 Protein of unknown function, DUF624 LIT32_11895 PF00892 EamA-like transporter family LIT32_11900 PF00155 Aminotransferase class I and II LIT32_11900 PF00392 Bacterial regulatory proteins, gntR family LIT32_11920 PF17209 Hfq protein LIT32_11925 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_11925 PF17866 AAA lid domain LIT32_11930 PF03458 UPF0126 domain LIT32_11935 PF16360 GTP-binding GTPase Middle Region LIT32_11935 PF13167 GTP-binding GTPase N-terminal LIT32_11935 PF01926 50S ribosome-binding GTPase LIT32_11940 PF06838 Methionine gamma-lyase LIT32_11945 PF13411 MerR HTH family regulatory protein LIT32_11950 PF00120 Glutamine synthetase, catalytic domain LIT32_11950 PF03951 Glutamine synthetase, beta-Grasp domain LIT32_11955 PF01047 MarR family LIT32_11960 PF00392 Bacterial regulatory proteins, gntR family LIT32_11960 PF07729 FCD domain LIT32_11965 PF05525 Branched-chain amino acid transport protein LIT32_11975 PF03741 Integral membrane protein TerC family LIT32_11985 PF00583 Acetyltransferase (GNAT) family LIT32_11995 PF07883 Cupin domain LIT32_11995 PF01381 Helix-turn-helix LIT32_12000 PF01810 LysE type translocator LIT32_12015 PF01726 LexA DNA binding domain LIT32_12015 PF00717 Peptidase S24-like LIT32_12020 PF01476 LysM domain LIT32_12025 PF00239 Resolvase, N terminal domain LIT32_12030 PF05979 Bacterial protein of unknown function (DUF896) LIT32_12035 PF02779 Transketolase, pyrimidine binding domain LIT32_12035 PF02780 Transketolase, C-terminal domain LIT32_12035 PF00456 Transketolase, thiamine diphosphate binding domain LIT32_12040 PF10747 Sporulation inhibitor of replication protein SirA LIT32_12045 PF03672 Uncharacterised protein family (UPF0154) LIT32_12055 PF11122 Inner spore coat protein D LIT32_12060 PF09388 Spo0E like sporulation regulatory protein LIT32_12065 PF02683 Cytochrome C biogenesis protein transmembrane region LIT32_12070 PF00072 Response regulator receiver domain LIT32_12075 PF07301 Protein of unknown function (DUF1453) LIT32_12080 PF11084 Protein of unknown function (DUF2621) LIT32_12110 PF08179 Small acid-soluble spore protein P family LIT32_12125 PF00694 Aconitase C-terminal domain LIT32_12125 PF00330 Aconitase family (aconitate hydratase) LIT32_12130 PF00578 AhpC/TSA family LIT32_12135 PF13040 Fur-regulated basic protein B LIT32_12140 PF08177 Small acid-soluble spore protein N family LIT32_12150 PF03061 Thioesterase superfamily LIT32_12160 PF01521 Iron-sulphur cluster biosynthesis LIT32_12165 PF09587 Bacterial capsule synthesis protein PGA_cap LIT32_12170 PF02660 Glycerol-3-phosphate acyltransferase LIT32_12175 PF13380 CoA binding domain LIT32_12190 PF00204 DNA gyrase B LIT32_12190 PF00986 DNA gyrase B subunit, carboxyl terminus LIT32_12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_12190 PF01751 Toprim domain LIT32_12195 PF00521 DNA gyrase/topoisomerase IV, subunit A LIT32_12195 PF03989 DNA gyrase C-terminal domain, beta-propeller LIT32_12210 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_12215 PF09339 IclR helix-turn-helix domain LIT32_12215 PF01614 Bacterial transcriptional regulator LIT32_12220 PF02632 BioY family LIT32_12225 PF00501 AMP-binding enzyme LIT32_12225 PF13193 AMP-binding enzyme C-terminal domain LIT32_12230 PF02803 Thiolase, C-terminal domain LIT32_12230 PF00108 Thiolase, N-terminal domain LIT32_12245 PF02899 Phage integrase, N-terminal SAM-like domain LIT32_12245 PF00589 Phage integrase family LIT32_12250 PF00589 Phage integrase family LIT32_12270 PF00271 Helicase conserved C-terminal domain LIT32_12295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIT32_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_12300 PF03466 LysR substrate binding domain LIT32_12325 PF13361 UvrD-like helicase C-terminal domain LIT32_12325 PF00580 UvrD/REP helicase N-terminal domain LIT32_12335 PF00069 Protein kinase domain LIT32_12405 PF00145 C-5 cytosine-specific DNA methylase LIT32_12410 PF08241 Methyltransferase domain LIT32_12425 PF06821 Serine hydrolase LIT32_12445 PF13732 Domain of unknown function (DUF4162) LIT32_12445 PF00005 ABC transporter LIT32_12465 PF07690 Major Facilitator Superfamily LIT32_12475 PF10127 RNA repair pathway DNA polymerase beta family LIT32_12485 PF01022 Bacterial regulatory protein, arsR family LIT32_12500 PF00300 Histidine phosphatase superfamily (branch 1) LIT32_12505 PF02654 Cobalamin-5-phosphate synthase LIT32_12510 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LIT32_12515 PF00155 Aminotransferase class I and II LIT32_12520 PF03186 CobD/Cbib protein LIT32_12525 PF00005 ABC transporter LIT32_12530 PF01032 FecCD transport family LIT32_12535 PF01497 Periplasmic binding protein LIT32_12540 PF02277 Phosphoribosyltransferase LIT32_12545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LIT32_12545 PF07685 CobB/CobQ-like glutamine amidotransferase domain LIT32_12550 PF12557 Cob(I)alamin adenosyltransferase N terminal LIT32_12550 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LIT32_12560 PF07687 Peptidase dimerisation domain LIT32_12560 PF01546 Peptidase family M20/M25/M40 LIT32_12570 PF00384 Molybdopterin oxidoreductase LIT32_12570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LIT32_12570 PF01568 Molydopterin dinucleotide binding domain LIT32_12570 PF12838 4Fe-4S dicluster domain LIT32_12570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIT32_12575 PF00107 Zinc-binding dehydrogenase LIT32_12575 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_12595 PF01266 FAD dependent oxidoreductase LIT32_12610 PF03551 Transcriptional regulator PadR-like family LIT32_12620 PF06949 Protein of unknown function (DUF1292) LIT32_12630 PF01541 GIY-YIG catalytic domain LIT32_12640 PF05995 Cysteine dioxygenase type I LIT32_12665 PF03734 L,D-transpeptidase catalytic domain LIT32_12720 PF04309 Glycerol-3-phosphate responsive antiterminator LIT32_12740 PF04203 Sortase domain LIT32_12765 PF02334 Replication terminator protein LIT32_12770 PF02342 TerD domain LIT32_12780 PF00535 Glycosyl transferase family 2 LIT32_12790 PF07690 Major Facilitator Superfamily LIT32_12795 PF07849 Protein of unknown function (DUF1641) LIT32_12800 PF01568 Molydopterin dinucleotide binding domain LIT32_12800 PF00384 Molybdopterin oxidoreductase LIT32_12800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIT32_12800 PF12838 4Fe-4S dicluster domain LIT32_12800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LIT32_12805 PF02597 ThiS family LIT32_12810 PF02391 MoaE protein LIT32_12815 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LIT32_12820 PF03454 MoeA C-terminal region (domain IV) LIT32_12820 PF03453 MoeA N-terminal region (domain I and II) LIT32_12820 PF00994 Probable molybdopterin binding domain LIT32_12825 PF04055 Radical SAM superfamily LIT32_12825 PF06463 Molybdenum Cofactor Synthesis C LIT32_12830 PF02634 FdhD/NarQ family LIT32_12835 PF02675 S-adenosylmethionine decarboxylase LIT32_12865 PF12867 DinB superfamily LIT32_12875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_12885 PF00392 Bacterial regulatory proteins, gntR family LIT32_12890 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_12895 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_12935 PF07690 Major Facilitator Superfamily LIT32_12940 PF02525 Flavodoxin-like fold LIT32_12945 PF01872 RibD C-terminal domain LIT32_12950 PF01978 Sugar-specific transcriptional regulator TrmB LIT32_12950 PF11495 Archaeal transcriptional regulator TrmB LIT32_12955 PF01810 LysE type translocator LIT32_12960 PF01713 Smr domain LIT32_12960 PF00488 MutS domain V LIT32_12965 PF02682 Carboxyltransferase domain, subdomain C and D LIT32_12970 PF02626 Carboxyltransferase domain, subdomain A and B LIT32_12975 PF03746 LamB/YcsF family LIT32_12980 PF01566 Natural resistance-associated macrophage protein LIT32_12985 PF00535 Glycosyl transferase family 2 LIT32_12985 PF13181 Tetratricopeptide repeat LIT32_12990 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_12990 PF14602 Hexapeptide repeat of succinyl-transferase LIT32_12990 PF12464 Maltose acetyltransferase LIT32_13010 PF00534 Glycosyl transferases group 1 LIT32_13010 PF13439 Glycosyltransferase Family 4 LIT32_13015 PF01370 NAD dependent epimerase/dehydratase family LIT32_13020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_13020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_13025 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LIT32_13030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT32_13030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT32_13030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT32_13035 PF02589 LUD domain LIT32_13040 PF02589 LUD domain LIT32_13040 PF11870 Domain of unknown function (DUF3390) LIT32_13040 PF13183 4Fe-4S dicluster domain LIT32_13045 PF02754 Cysteine-rich domain LIT32_13050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LIT32_13060 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LIT32_13065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIT32_13065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIT32_13070 PF02805 Metal binding domain of Ada LIT32_13070 PF12833 Helix-turn-helix domain LIT32_13080 PF17801 Alpha galactosidase C-terminal beta sandwich domain LIT32_13085 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT32_13085 PF00480 ROK family LIT32_13090 PF05698 Bacterial trigger factor protein (TF) C-terminus LIT32_13095 PF16990 Carbohydrate binding module (family 35) LIT32_13095 PF03422 Carbohydrate binding module (family 6) LIT32_13095 PF13199 Glycosyl hydrolase family 66 LIT32_13105 PF16338 Domain of unknown function (DUF4968) LIT32_13105 PF13802 Galactose mutarotase-like LIT32_13105 PF17137 Domain of unknown function (DUF5110) LIT32_13105 PF01055 Glycosyl hydrolases family 31 LIT32_13110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_13110 PF06580 Histidine kinase LIT32_13115 PF00072 Response regulator receiver domain LIT32_13115 PF12833 Helix-turn-helix domain LIT32_13125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_13130 PF02652 L-lactate permease LIT32_13135 PF09339 IclR helix-turn-helix domain LIT32_13135 PF01614 Bacterial transcriptional regulator LIT32_13140 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT32_13145 PF03949 Malic enzyme, NAD binding domain LIT32_13145 PF00390 Malic enzyme, N-terminal domain LIT32_13150 PF01274 Malate synthase LIT32_13155 PF02913 FAD linked oxidases, C-terminal domain LIT32_13155 PF01565 FAD binding domain LIT32_13160 PF02754 Cysteine-rich domain LIT32_13160 PF13183 4Fe-4S dicluster domain LIT32_13165 PF01565 FAD binding domain LIT32_13165 PF02913 FAD linked oxidases, C-terminal domain LIT32_13170 PF07729 FCD domain LIT32_13170 PF00392 Bacterial regulatory proteins, gntR family LIT32_13175 PF01636 Phosphotransferase enzyme family LIT32_13180 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_13180 PF00107 Zinc-binding dehydrogenase LIT32_13185 PF00392 Bacterial regulatory proteins, gntR family LIT32_13190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_13190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_13195 PF00248 Aldo/keto reductase family LIT32_13200 PF04143 Sulphur transport LIT32_13205 PF07486 Cell Wall Hydrolase LIT32_13210 PF00583 Acetyltransferase (GNAT) family LIT32_13215 PF00795 Carbon-nitrogen hydrolase LIT32_13215 PF00583 Acetyltransferase (GNAT) family LIT32_13225 PF00512 His Kinase A (phospho-acceptor) domain LIT32_13225 PF00989 PAS fold LIT32_13225 PF08447 PAS fold LIT32_13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_13230 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_13265 PF05163 DinB family LIT32_13270 PF03575 Peptidase family S51 LIT32_13305 PF00664 ABC transporter transmembrane region LIT32_13305 PF00005 ABC transporter LIT32_13320 PF00664 ABC transporter transmembrane region LIT32_13320 PF00005 ABC transporter LIT32_13340 PF07475 HPr Serine kinase C-terminal domain LIT32_13340 PF02603 HPr Serine kinase N terminus LIT32_13355 PF16363 GDP-mannose 4,6 dehydratase LIT32_13360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LIT32_13365 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_13365 PF17836 PglD N-terminal domain LIT32_13370 PF02397 Bacterial sugar transferase LIT32_13380 PF00535 Glycosyl transferase family 2 LIT32_13390 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_13390 PF12464 Maltose acetyltransferase LIT32_13410 PF00535 Glycosyl transferase family 2 LIT32_13430 PF01757 Acyltransferase family LIT32_13440 PF00535 Glycosyl transferase family 2 LIT32_13445 PF00534 Glycosyl transferases group 1 LIT32_13445 PF13439 Glycosyltransferase Family 4 LIT32_13450 PF00535 Glycosyl transferase family 2 LIT32_13450 PF01501 Glycosyl transferase family 8 LIT32_13455 PF00534 Glycosyl transferases group 1 LIT32_13455 PF13439 Glycosyltransferase Family 4 LIT32_13460 PF00483 Nucleotidyl transferase LIT32_13465 PF02719 Polysaccharide biosynthesis protein LIT32_13475 PF13614 AAA domain LIT32_13480 PF02706 Chain length determinant protein LIT32_13480 PF13807 G-rich domain on putative tyrosine kinase LIT32_13485 PF01381 Helix-turn-helix LIT32_13485 PF08671 Anti-repressor SinI LIT32_13500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_13500 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_13500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_13510 PF00465 Iron-containing alcohol dehydrogenase LIT32_13525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT32_13525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT32_13530 PF00696 Amino acid kinase family LIT32_13530 PF13840 ACT domain LIT32_13535 PF07690 Major Facilitator Superfamily LIT32_13540 PF01476 LysM domain LIT32_13540 PF06725 3D domain LIT32_13545 PF00440 Bacterial regulatory proteins, tetR family LIT32_13545 PF17922 Tetracyclin repressor-like, C-terminal domain LIT32_13550 PF00854 POT family LIT32_13555 PF08267 Cobalamin-independent synthase, N-terminal domain LIT32_13555 PF01717 Cobalamin-independent synthase, Catalytic domain LIT32_13565 PF00512 His Kinase A (phospho-acceptor) domain LIT32_13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_13570 PF13302 Acetyltransferase (GNAT) domain LIT32_13580 PF08220 DeoR-like helix-turn-helix domain LIT32_13580 PF00455 DeoR C terminal sensor domain LIT32_13585 PF06276 Ferric iron reductase FhuF-like transporter LIT32_13585 PF04183 IucA / IucC family LIT32_13590 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LIT32_13600 PF04183 IucA / IucC family LIT32_13600 PF06276 Ferric iron reductase FhuF-like transporter LIT32_13605 PF00282 Pyridoxal-dependent decarboxylase conserved domain LIT32_13610 PF00202 Aminotransferase class-III LIT32_13615 PF07859 alpha/beta hydrolase fold LIT32_13625 PF02581 Thiamine monophosphate synthase LIT32_13630 PF08543 Phosphomethylpyrimidine kinase LIT32_13635 PF02110 Hydroxyethylthiazole kinase family LIT32_13640 PF01810 LysE type translocator LIT32_13645 PF00209 Sodium:neurotransmitter symporter family LIT32_13655 PF10503 Esterase PHB depolymerase LIT32_13660 PF02096 60Kd inner membrane protein LIT32_13670 PF01497 Periplasmic binding protein LIT32_13675 PF00005 ABC transporter LIT32_13680 PF01032 FecCD transport family LIT32_13685 PF00881 Nitroreductase family LIT32_13700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_13705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LIT32_13705 PF07685 CobB/CobQ-like glutamine amidotransferase domain LIT32_13710 PF01890 Cobalamin synthesis G C-terminus LIT32_13710 PF11760 Cobalamin synthesis G N-terminal LIT32_13710 PF11761 Cobalamin biosynthesis central region LIT32_13715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_13720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_13725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_13730 PF01888 CbiD LIT32_13735 PF02570 Precorrin-8X methylmutase LIT32_13740 PF02571 Precorrin-6x reductase CbiJ/CobK LIT32_13745 PF01903 CbiX LIT32_13750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIT32_13750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT32_13760 PF01891 Cobalt uptake substrate-specific transmembrane region LIT32_13765 PF02553 Cobalt transport protein component CbiN LIT32_13775 PF00005 ABC transporter LIT32_13780 PF05163 DinB family LIT32_13805 PF08439 Oligopeptidase F LIT32_13805 PF01432 Peptidase family M3 LIT32_13815 PF14169 Cold-inducible protein YdjO LIT32_13830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_13830 PF08447 PAS fold LIT32_13830 PF00989 PAS fold LIT32_13830 PF00512 His Kinase A (phospho-acceptor) domain LIT32_13840 PF02272 DHHA1 domain LIT32_13840 PF01411 tRNA synthetases class II (A) LIT32_13840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT32_13850 PF01494 FAD binding domain LIT32_13865 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT32_13875 PF06800 Sugar transport protein LIT32_13885 PF00171 Aldehyde dehydrogenase family LIT32_13895 PF13243 Squalene-hopene cyclase C-terminal domain LIT32_13895 PF13249 Squalene-hopene cyclase N-terminal domain LIT32_13910 PF00326 Prolyl oligopeptidase family LIT32_13915 PF08678 Rsbr N terminal LIT32_13915 PF01740 STAS domain LIT32_13925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LIT32_13940 PF02817 e3 binding domain LIT32_13940 PF00364 Biotin-requiring enzyme LIT32_13940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIT32_13945 PF00676 Dehydrogenase E1 component LIT32_13945 PF16870 2-oxoglutarate dehydrogenase C-terminal LIT32_13945 PF02779 Transketolase, pyrimidine binding domain LIT32_13955 PF00092 von Willebrand factor type A domain LIT32_13960 PF07728 AAA domain (dynein-related subfamily) LIT32_13965 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_13985 PF00296 Luciferase-like monooxygenase LIT32_13990 PF00296 Luciferase-like monooxygenase LIT32_13995 PF00392 Bacterial regulatory proteins, gntR family LIT32_13995 PF00155 Aminotransferase class I and II LIT32_14000 PF01638 HxlR-like helix-turn-helix LIT32_14005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIT32_14010 PF01380 SIS domain LIT32_14015 PF00106 short chain dehydrogenase LIT32_14020 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_14020 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_14025 PF04294 VanW like protein LIT32_14030 PF00884 Sulfatase LIT32_14035 PF00080 Copper/zinc superoxide dismutase (SODC) LIT32_14035 PF13627 Prokaryotic lipoprotein-attachment site LIT32_14040 PF00750 tRNA synthetases class I (R) LIT32_14040 PF05746 DALR anticodon binding domain LIT32_14040 PF03485 Arginyl tRNA synthetase N terminal domain LIT32_14045 PF11738 Protein of unknown function (DUF3298) LIT32_14045 PF13739 Deacetylase PdaC LIT32_14050 PF01476 LysM domain LIT32_14050 PF00877 NlpC/P60 family LIT32_14065 PF00860 Permease family LIT32_14070 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIT32_14070 PF10372 Bacterial membrane-spanning protein N-terminus LIT32_14075 PF01554 MatE LIT32_14080 PF02585 GlcNAc-PI de-N-acetylase LIT32_14085 PF08830 Protein of unknown function (DUF1806) LIT32_14095 PF00892 EamA-like transporter family LIT32_14110 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LIT32_14120 PF01638 HxlR-like helix-turn-helix LIT32_14125 PF00881 Nitroreductase family LIT32_14130 PF01738 Dienelactone hydrolase family LIT32_14135 PF03358 NADPH-dependent FMN reductase LIT32_14140 PF01471 Putative peptidoglycan binding domain LIT32_14140 PF03572 Peptidase family S41 LIT32_14140 PF17820 PDZ domain LIT32_14145 PF08241 Methyltransferase domain LIT32_14155 PF03167 Uracil DNA glycosylase superfamily LIT32_14160 PF02557 D-alanyl-D-alanine carboxypeptidase LIT32_14165 PF01048 Phosphorylase superfamily LIT32_14175 PF14191 YodL-like LIT32_14180 PF01569 PAP2 superfamily LIT32_14190 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_14195 PF01925 Sulfite exporter TauE/SafE LIT32_14225 PF07070 SpoOM protein LIT32_14230 PF08239 Bacterial SH3 domain LIT32_14230 PF00069 Protein kinase domain LIT32_14240 PF10720 Protein of unknown function (DUF2515) LIT32_14245 PF14162 YozD-like protein LIT32_14265 PF09529 Integral membrane protein (intg_mem_TP0381) LIT32_14270 PF17885 Styrene monooxygenase A putative substrate binding domain LIT32_14280 PF04439 Streptomycin adenylyltransferase LIT32_14295 PF00884 Sulfatase LIT32_14300 PF00873 AcrB/AcrD/AcrF family LIT32_14305 PF13302 Acetyltransferase (GNAT) domain LIT32_14310 PF07690 Major Facilitator Superfamily LIT32_14315 PF00877 NlpC/P60 family LIT32_14315 PF01476 LysM domain LIT32_14320 PF00905 Penicillin binding protein transpeptidase domain LIT32_14325 PF00155 Aminotransferase class I and II LIT32_14325 PF00392 Bacterial regulatory proteins, gntR family LIT32_14330 PF02667 Short chain fatty acid transporter LIT32_14345 PF12823 Domain of unknown function (DUF3817) LIT32_14355 PF05163 DinB family LIT32_14360 PF07690 Major Facilitator Superfamily LIT32_14365 PF01047 MarR family LIT32_14370 PF06855 YozE SAM-like fold LIT32_14375 PF14122 YokU-like protein, putative antitoxin LIT32_14380 PF12544 Lysine-2,3-aminomutase LIT32_14385 PF02954 Bacterial regulatory protein, Fis family LIT32_14385 PF13426 PAS domain LIT32_14385 PF00158 Sigma-54 interaction domain LIT32_14390 PF00583 Acetyltransferase (GNAT) family LIT32_14395 PF00171 Aldehyde dehydrogenase family LIT32_14400 PF01546 Peptidase family M20/M25/M40 LIT32_14400 PF07687 Peptidase dimerisation domain LIT32_14405 PF01144 Coenzyme A transferase LIT32_14410 PF01144 Coenzyme A transferase LIT32_14415 PF00202 Aminotransferase class-III LIT32_14445 PF04607 Region found in RelA / SpoT proteins LIT32_14450 PF03960 ArsC family LIT32_14460 PF01425 Amidase LIT32_14475 PF00158 Sigma-54 interaction domain LIT32_14475 PF00989 PAS fold LIT32_14475 PF02954 Bacterial regulatory protein, Fis family LIT32_14485 PF01144 Coenzyme A transferase LIT32_14490 PF01144 Coenzyme A transferase LIT32_14505 PF13419 Haloacid dehalogenase-like hydrolase LIT32_14510 PF00561 alpha/beta hydrolase fold LIT32_14520 PF01522 Polysaccharide deacetylase LIT32_14525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_14530 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_14535 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_14555 PF01047 MarR family LIT32_14560 PF13673 Acetyltransferase (GNAT) domain LIT32_14570 PF00392 Bacterial regulatory proteins, gntR family LIT32_14570 PF07702 UTRA domain LIT32_14575 PF00232 Glycosyl hydrolase family 1 LIT32_14580 PF07662 Na+ dependent nucleoside transporter C-terminus LIT32_14580 PF01773 Na+ dependent nucleoside transporter N-terminus LIT32_14600 PF08713 DNA alkylation repair enzyme LIT32_14605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIT32_14605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIT32_14610 PF00667 FAD binding domain LIT32_14610 PF00258 Flavodoxin LIT32_14610 PF00175 Oxidoreductase NAD-binding domain LIT32_14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_14615 PF03466 LysR substrate binding domain LIT32_14635 PF01545 Cation efflux family LIT32_14635 PF16916 Dimerisation domain of Zinc Transporter LIT32_14645 PF04055 Radical SAM superfamily LIT32_14645 PF06968 Biotin and Thiamin Synthesis associated domain LIT32_14650 PF05698 Bacterial trigger factor protein (TF) C-terminus LIT32_14660 PF01544 CorA-like Mg2+ transporter protein LIT32_14665 PF00158 Sigma-54 interaction domain LIT32_14670 PF00202 Aminotransferase class-III LIT32_14675 PF00474 Sodium:solute symporter family LIT32_14680 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_14685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LIT32_14690 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_14695 PF00005 ABC transporter LIT32_14695 PF00571 CBS domain LIT32_14705 PF05525 Branched-chain amino acid transport protein LIT32_14710 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LIT32_14710 PF11611 Domain of unknown function (DUF4352) LIT32_14715 PF00245 Alkaline phosphatase LIT32_14740 PF08241 Methyltransferase domain LIT32_14750 PF16244 Domain of unknown function (DUF4901) LIT32_14755 PF00668 Condensation domain LIT32_14755 PF00550 Phosphopantetheine attachment site LIT32_14755 PF00501 AMP-binding enzyme LIT32_14755 PF13193 AMP-binding enzyme C-terminal domain LIT32_14760 PF00005 ABC transporter LIT32_14760 PF00664 ABC transporter transmembrane region LIT32_14765 PF00501 AMP-binding enzyme LIT32_14765 PF13193 AMP-binding enzyme C-terminal domain LIT32_14765 PF00668 Condensation domain LIT32_14765 PF00550 Phosphopantetheine attachment site LIT32_14765 PF00975 Thioesterase domain LIT32_14770 PF00550 Phosphopantetheine attachment site LIT32_14770 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT32_14770 PF16197 Ketoacyl-synthetase C-terminal extension LIT32_14770 PF00668 Condensation domain LIT32_14770 PF00698 Acyl transferase domain LIT32_14770 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT32_14775 PF00501 AMP-binding enzyme LIT32_14775 PF00975 Thioesterase domain LIT32_14775 PF00550 Phosphopantetheine attachment site LIT32_14775 PF00668 Condensation domain LIT32_14775 PF13193 AMP-binding enzyme C-terminal domain LIT32_14780 PF00975 Thioesterase domain LIT32_14790 PF11954 Domain of unknown function (DUF3471) LIT32_14790 PF00144 Beta-lactamase LIT32_14815 PF00892 EamA-like transporter family LIT32_14820 PF00155 Aminotransferase class I and II LIT32_14820 PF00392 Bacterial regulatory proteins, gntR family LIT32_14830 PF07561 Domain of Unknown Function (DUF1540) LIT32_14835 PF00391 PEP-utilising enzyme, mobile domain LIT32_14835 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LIT32_14845 PF00082 Subtilase family LIT32_14855 PF00512 His Kinase A (phospho-acceptor) domain LIT32_14855 PF00672 HAMP domain LIT32_14855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_14860 PF00486 Transcriptional regulatory protein, C terminal LIT32_14860 PF00072 Response regulator receiver domain LIT32_14865 PF00005 ABC transporter LIT32_14870 PF02687 FtsX-like permease family LIT32_14880 PF03845 Spore germination protein LIT32_14885 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_14890 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_14895 PF01546 Peptidase family M20/M25/M40 LIT32_14895 PF07687 Peptidase dimerisation domain LIT32_14900 PF03576 Peptidase family S58 LIT32_14905 PF12822 ECF transporter, substrate-specific component LIT32_14910 PF02361 Cobalt transport protein LIT32_14915 PF00005 ABC transporter LIT32_14920 PF00005 ABC transporter LIT32_14930 PF00171 Aldehyde dehydrogenase family LIT32_14935 PF00180 Isocitrate/isopropylmalate dehydrogenase LIT32_14940 PF02954 Bacterial regulatory protein, Fis family LIT32_14940 PF00989 PAS fold LIT32_14940 PF00158 Sigma-54 interaction domain LIT32_14945 PF03033 Glycosyltransferase family 28 N-terminal domain LIT32_14945 PF04101 Glycosyltransferase family 28 C-terminal domain LIT32_14950 PF03466 LysR substrate binding domain LIT32_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_14955 PF00285 Citrate synthase, C-terminal domain LIT32_14970 PF00491 Arginase family LIT32_14975 PF00465 Iron-containing alcohol dehydrogenase LIT32_14980 PF00171 Aldehyde dehydrogenase family LIT32_14985 PF00324 Amino acid permease LIT32_14990 PF13411 MerR HTH family regulatory protein LIT32_14990 PF06445 GyrI-like small molecule binding domain LIT32_14995 PF02225 PA domain LIT32_14995 PF00082 Subtilase family LIT32_14995 PF13860 FlgD Ig-like domain LIT32_14995 PF05922 Peptidase inhibitor I9 LIT32_15000 PF00196 Bacterial regulatory proteins, luxR family LIT32_15000 PF00072 Response regulator receiver domain LIT32_15005 PF13492 GAF domain LIT32_15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_15005 PF07730 Histidine kinase LIT32_15030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_15030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_15040 PF02311 AraC-like ligand binding domain LIT32_15040 PF12833 Helix-turn-helix domain LIT32_15045 PF05721 Phytanoyl-CoA dioxygenase (PhyH) LIT32_15050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LIT32_15080 PF04542 Sigma-70 region 2 LIT32_15080 PF08281 Sigma-70, region 4 LIT32_15090 PF00480 ROK family LIT32_15100 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15105 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LIT32_15115 PF02837 Glycosyl hydrolases family 2, sugar binding domain LIT32_15115 PF16355 Domain of unknown function (DUF4982) LIT32_15115 PF00703 Glycosyl hydrolases family 2 LIT32_15120 PF00480 ROK family LIT32_15120 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT32_15125 PF05163 DinB family LIT32_15135 PF04229 GrpB protein LIT32_15135 PF13673 Acetyltransferase (GNAT) domain LIT32_15160 PF07690 Major Facilitator Superfamily LIT32_15175 PF12796 Ankyrin repeats (3 copies) LIT32_15180 PF00072 Response regulator receiver domain LIT32_15180 PF00486 Transcriptional regulatory protein, C terminal LIT32_15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_15185 PF00512 His Kinase A (phospho-acceptor) domain LIT32_15185 PF00989 PAS fold LIT32_15185 PF16736 Single Cache-like LIT32_15195 PF07690 Major Facilitator Superfamily LIT32_15205 PF01554 MatE LIT32_15215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_15215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_15220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_15220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_15225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_15225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_15235 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15240 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15245 PF13416 Bacterial extracellular solute-binding protein LIT32_15250 PF00392 Bacterial regulatory proteins, gntR family LIT32_15255 PF01636 Phosphotransferase enzyme family LIT32_15280 PF02311 AraC-like ligand binding domain LIT32_15280 PF12833 Helix-turn-helix domain LIT32_15300 PF11975 Family 4 glycosyl hydrolase C-terminal domain LIT32_15300 PF02056 Family 4 glycosyl hydrolase LIT32_15305 PF04854 Protein of unknown function, DUF624 LIT32_15310 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15315 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15330 PF13520 Amino acid permease LIT32_15335 PF02796 Helix-turn-helix domain of resolvase LIT32_15335 PF00239 Resolvase, N terminal domain LIT32_15355 PF00005 ABC transporter LIT32_15360 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15365 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_15370 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_15375 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_15380 PF00462 Glutaredoxin LIT32_15385 PF00583 Acetyltransferase (GNAT) family LIT32_15390 PF00296 Luciferase-like monooxygenase LIT32_15395 PF00296 Luciferase-like monooxygenase LIT32_15405 PF03180 NLPA lipoprotein LIT32_15410 PF01074 Glycosyl hydrolases family 38 N-terminal domain LIT32_15410 PF09261 Alpha mannosidase middle domain LIT32_15410 PF07748 Glycosyl hydrolases family 38 C-terminal domain LIT32_15415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_15415 PF02378 Phosphotransferase system, EIIC LIT32_15415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_15420 PF01380 SIS domain LIT32_15420 PF01418 Helix-turn-helix domain, rpiR family LIT32_15435 PF00440 Bacterial regulatory proteins, tetR family LIT32_15440 PF00664 ABC transporter transmembrane region LIT32_15440 PF00005 ABC transporter LIT32_15455 PF00271 Helicase conserved C-terminal domain LIT32_15455 PF00176 SNF2 family N-terminal domain LIT32_15455 PF04434 SWIM zinc finger LIT32_15460 PF08241 Methyltransferase domain LIT32_15465 PF10901 Protein of unknown function (DUF2690) LIT32_15475 PF00324 Amino acid permease LIT32_15480 PF00082 Subtilase family LIT32_15480 PF05922 Peptidase inhibitor I9 LIT32_15485 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_15490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIT32_15500 PF01740 STAS domain LIT32_15500 PF13426 PAS domain LIT32_15505 PF00293 NUDIX domain LIT32_15510 PF00311 Phosphoenolpyruvate carboxylase LIT32_15530 PF01380 SIS domain LIT32_15535 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIT32_15540 PF00356 Bacterial regulatory proteins, lacI family LIT32_15550 PF07690 Major Facilitator Superfamily LIT32_15555 PF00294 pfkB family carbohydrate kinase LIT32_15570 PF00881 Nitroreductase family LIT32_15575 PF01047 MarR family LIT32_15580 PF03845 Spore germination protein LIT32_15585 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_15595 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_15600 PF03845 Spore germination protein LIT32_15605 PF00149 Calcineurin-like phosphoesterase LIT32_15620 PF00805 Pentapeptide repeats (8 copies) LIT32_15625 PF13419 Haloacid dehalogenase-like hydrolase LIT32_15635 PF00155 Aminotransferase class I and II LIT32_15635 PF00392 Bacterial regulatory proteins, gntR family LIT32_15640 PF05163 DinB family LIT32_15645 PF00107 Zinc-binding dehydrogenase LIT32_15645 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_15650 PF00381 PTS HPr component phosphorylation site LIT32_15665 PF13732 Domain of unknown function (DUF4162) LIT32_15665 PF00005 ABC transporter LIT32_15670 PF00440 Bacterial regulatory proteins, tetR family LIT32_15680 PF00892 EamA-like transporter family LIT32_15685 PF02311 AraC-like ligand binding domain LIT32_15685 PF12833 Helix-turn-helix domain LIT32_15690 PF17676 LD-carboxypeptidase C-terminal domain LIT32_15690 PF02016 LD-carboxypeptidase N-terminal domain LIT32_15705 PF02423 Ornithine cyclodeaminase/mu-crystallin family LIT32_15710 PF07690 Major Facilitator Superfamily LIT32_15710 PF00083 Sugar (and other) transporter LIT32_15715 PF07702 UTRA domain LIT32_15715 PF00392 Bacterial regulatory proteins, gntR family LIT32_15720 PF05975 Bacterial ABC transporter protein EcsB LIT32_15735 PF00583 Acetyltransferase (GNAT) family LIT32_15740 PF07690 Major Facilitator Superfamily LIT32_15750 PF02681 Divergent PAP2 family LIT32_15760 PF02824 TGS domain LIT32_15760 PF03129 Anticodon binding domain LIT32_15760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT32_15760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT32_15765 PF01966 HD domain LIT32_15775 PF08386 TAP-like protein LIT32_15775 PF00561 alpha/beta hydrolase fold LIT32_15785 PF13676 TIR domain LIT32_15795 PF00313 'Cold-shock' DNA-binding domain LIT32_15800 PF09680 Family of unknown function LIT32_15805 PF00583 Acetyltransferase (GNAT) family LIT32_15810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_15815 PF01641 SelR domain LIT32_15815 PF01625 Peptide methionine sulfoxide reductase LIT32_15820 PF01047 MarR family LIT32_15830 PF12697 Alpha/beta hydrolase family LIT32_15845 PF17431 Uncharacterized YmpT-like LIT32_15850 PF13180 PDZ domain LIT32_15860 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) LIT32_15880 PF02630 SCO1/SenC LIT32_15895 PF02645 Uncharacterised protein, DegV family COG1307 LIT32_15900 PF10751 Protein of unknown function (DUF2535) LIT32_15905 PF00585 C-terminal regulatory domain of Threonine dehydratase LIT32_15905 PF00291 Pyridoxal-phosphate dependent enzyme LIT32_15910 PF00158 Sigma-54 interaction domain LIT32_15910 PF08461 Ribonuclease R winged-helix domain LIT32_15915 PF03006 Haemolysin-III related LIT32_15925 PF00186 Dihydrofolate reductase LIT32_15930 PF00303 Thymidylate synthase LIT32_15935 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain LIT32_15945 PF03741 Integral membrane protein TerC family LIT32_15950 PF04608 Phosphatidylglycerophosphatase A LIT32_15955 PF14005 YpjP-like protein LIT32_15965 PF04445 Putative SAM-dependent methyltransferase LIT32_15970 PF06491 Disulphide isomerase LIT32_15975 PF00920 Dehydratase family LIT32_15980 PF00557 Metallopeptidase family M24 LIT32_15985 PF08241 Methyltransferase domain LIT32_15990 PF08712 Scaffold protein Nfu/NifU N terminal LIT32_15990 PF13769 Virulence factor LIT32_15995 PF01966 HD domain LIT32_16000 PF02645 Uncharacterised protein, DegV family COG1307 LIT32_16010 PF00255 Glutathione peroxidase LIT32_16020 PF01268 Formate--tetrahydrofolate ligase LIT32_16025 PF04204 Homoserine O-succinyltransferase LIT32_16030 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT32_16030 PF00534 Glycosyl transferases group 1 LIT32_16035 PF04307 LexA-binding, inner membrane-associated putative hydrolase LIT32_16050 PF01209 ubiE/COQ5 methyltransferase family LIT32_16070 PF00381 PTS HPr component phosphorylation site LIT32_16080 PF00313 'Cold-shock' DNA-binding domain LIT32_16090 PF10819 Protein of unknown function (DUF2564) LIT32_16095 PF10782 Zinc-finger LIT32_16110 PF13456 Reverse transcriptase-like LIT32_16125 PF13460 NAD(P)H-binding LIT32_16130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIT32_16130 PF01367 5'-3' exonuclease, C-terminal SAM fold LIT32_16140 PF10752 Protein of unknown function (DUF2533) LIT32_16150 PF00350 Dynamin family LIT32_16160 PF00999 Sodium/hydrogen exchanger family LIT32_16165 PF02080 TrkA-C domain LIT32_16175 PF02525 Flavodoxin-like fold LIT32_16190 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LIT32_16195 PF02797 Chalcone and stilbene synthases, C-terminal domain LIT32_16195 PF00195 Chalcone and stilbene synthases, N-terminal domain LIT32_16200 PF13302 Acetyltransferase (GNAT) domain LIT32_16210 PF03734 L,D-transpeptidase catalytic domain LIT32_16215 PF11514 Protein of unknown function (DUF3219) LIT32_16220 PF00860 Permease family LIT32_16225 PF00156 Phosphoribosyl transferase domain LIT32_16235 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LIT32_16240 PF13307 Helicase C-terminal domain LIT32_16250 PF02926 THUMP domain LIT32_16250 PF01170 Putative RNA methylase family UPF0020 LIT32_16260 PF05103 DivIVA protein LIT32_16265 PF06908 YspA SLOG family LIT32_16270 PF11122 Inner spore coat protein D LIT32_16280 PF13482 RNase_H superfamily LIT32_16285 PF00271 Helicase conserved C-terminal domain LIT32_16285 PF09369 Domain of unknown function (DUF1998) LIT32_16285 PF00270 DEAD/DEAH box helicase LIT32_16290 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT32_16305 PF17334 Minor curli fiber component A LIT32_16320 PF14179 YppG-like protein LIT32_16325 PF14178 YppF-like protein LIT32_16350 PF10720 Protein of unknown function (DUF2515) LIT32_16355 PF03838 Recombination protein U LIT32_16360 PF00912 Transglycosylase LIT32_16360 PF00905 Penicillin binding protein transpeptidase domain LIT32_16370 PF00633 Helix-hairpin-helix motif LIT32_16370 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT32_16370 PF10576 Iron-sulfur binding domain of endonuclease III LIT32_16375 PF07261 Replication initiation and membrane attachment LIT32_16380 PF01336 OB-fold nucleic acid binding domain LIT32_16380 PF00152 tRNA synthetases class II (D, K and N) LIT32_16385 PF00155 Aminotransferase class I and II LIT32_16395 PF14084 Protein of unknown function (DUF4264) LIT32_16400 PF00929 Exonuclease LIT32_16400 PF04851 Type III restriction enzyme, res subunit LIT32_16400 PF13307 Helicase C-terminal domain LIT32_16405 PF02261 Aspartate decarboxylase LIT32_16410 PF02569 Pantoate-beta-alanine ligase LIT32_16415 PF02548 Ketopantoate hydroxymethyltransferase LIT32_16420 PF02237 Biotin protein ligase C terminal domain LIT32_16420 PF08279 HTH domain LIT32_16420 PF03099 Biotin/lipoate A/B protein ligase family LIT32_16425 PF12627 Probable RNA and SrmB- binding site of polymerase A LIT32_16425 PF01743 Poly A polymerase head domain LIT32_16425 PF13735 tRNA nucleotidyltransferase domain 2 putative LIT32_16430 PF13439 Glycosyltransferase Family 4 LIT32_16430 PF00534 Glycosyl transferases group 1 LIT32_16435 PF02585 GlcNAc-PI de-N-acetylase LIT32_16440 PF02142 MGS-like domain LIT32_16445 PF01113 Dihydrodipicolinate reductase, N-terminus LIT32_16445 PF05173 Dihydrodipicolinate reductase, C-terminus LIT32_16450 PF03819 MazG nucleotide pyrophosphohydrolase domain LIT32_16455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_16455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_16460 PF09577 Sporulation protein YpjB (SpoYpjB) LIT32_16465 PF07187 Protein of unknown function (DUF1405) LIT32_16470 PF00032 Cytochrome b(C-terminal)/b6/petD LIT32_16470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIT32_16475 PF00033 Cytochrome b/b6/petB LIT32_16480 PF00355 Rieske [2Fe-2S] domain LIT32_16485 PF10673 Protein of unknown function (DUF2487) LIT32_16490 PF01373 Glycosyl hydrolase family 14 LIT32_16490 PF00128 Alpha amylase, catalytic domain LIT32_16490 PF03423 Carbohydrate binding domain (family 25) LIT32_16495 PF08858 IDEAL domain LIT32_16495 PF08864 UPF0302 domain LIT32_16515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIT32_16520 PF02153 Prephenate dehydrogenase LIT32_16520 PF01842 ACT domain LIT32_16525 PF00155 Aminotransferase class I and II LIT32_16530 PF00290 Tryptophan synthase alpha chain LIT32_16535 PF00291 Pyridoxal-phosphate dependent enzyme LIT32_16540 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LIT32_16545 PF00218 Indole-3-glycerol phosphate synthase LIT32_16550 PF02885 Glycosyl transferase family, helical bundle domain LIT32_16550 PF00591 Glycosyl transferase family, a/b domain LIT32_16555 PF04715 Anthranilate synthase component I, N terminal region LIT32_16555 PF00425 chorismate binding enzyme LIT32_16560 PF07736 Chorismate mutase type I LIT32_16565 PF01761 3-dehydroquinate synthase LIT32_16570 PF01264 Chorismate synthase LIT32_16575 PF03705 CheR methyltransferase, all-alpha domain LIT32_16575 PF01739 CheR methyltransferase, SAM binding domain LIT32_16580 PF00334 Nucleoside diphosphate kinase LIT32_16585 PF00348 Polyprenyl synthetase LIT32_16590 PF01209 ubiE/COQ5 methyltransferase family LIT32_16595 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LIT32_16600 PF02081 Tryptophan RNA-binding attenuator protein LIT32_16605 PF01227 GTP cyclohydrolase I LIT32_16610 PF00216 Bacterial DNA-binding protein LIT32_16615 PF09547 Stage IV sporulation protein A (spore_IV_A) LIT32_16625 PF10966 Protein of unknown function (DUF2768) LIT32_16630 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LIT32_16630 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LIT32_16635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LIT32_16635 PF01926 50S ribosome-binding GTPase LIT32_16645 PF14045 YIEGIA protein LIT32_16655 PF14140 YpzI-like protein LIT32_16660 PF01070 FMN-dependent dehydrogenase LIT32_16665 PF00575 S1 RNA binding domain LIT32_16675 PF02224 Cytidylate kinase LIT32_16680 PF17313 Family of unknown function (DUF5359) LIT32_16690 PF14620 YpeB sporulation LIT32_16690 PF03413 Peptidase propeptide and YPEB domain LIT32_16695 PF07486 Cell Wall Hydrolase LIT32_16695 PF01471 Putative peptidoglycan binding domain LIT32_16700 PF13367 PrsW family intramembrane metalloprotease LIT32_16705 PF17763 Glutaminase/Asparaginase C-terminal domain LIT32_16705 PF00710 Asparaginase, N-terminal LIT32_16715 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIT32_16715 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIT32_16720 PF05389 Negative regulator of genetic competence (MecA) LIT32_16725 PF13411 MerR HTH family regulatory protein LIT32_16745 PF01476 LysM domain LIT32_16750 PF02517 CPBP intramembrane metalloprotease LIT32_16755 PF00270 DEAD/DEAH box helicase LIT32_16755 PF00271 Helicase conserved C-terminal domain LIT32_16760 PF14493 Helix-turn-helix domain LIT32_16770 PF12822 ECF transporter, substrate-specific component LIT32_16775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT32_16775 PF01842 ACT domain LIT32_16775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT32_16780 PF13426 PAS domain LIT32_16780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_16780 PF00512 His Kinase A (phospho-acceptor) domain LIT32_16780 PF00989 PAS fold LIT32_16780 PF13188 PAS domain LIT32_16785 PF02811 PHP domain LIT32_16790 PF01476 LysM domain LIT32_16790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LIT32_16800 PF08281 Sigma-70, region 4 LIT32_16800 PF04542 Sigma-70 region 2 LIT32_16805 PF01923 Cobalamin adenosyltransferase LIT32_16820 PF00512 His Kinase A (phospho-acceptor) domain LIT32_16820 PF00672 HAMP domain LIT32_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_16820 PF18698 Histidine kinase sensor domain LIT32_16820 PF00989 PAS fold LIT32_16825 PF00072 Response regulator receiver domain LIT32_16825 PF00486 Transcriptional regulatory protein, C terminal LIT32_16830 PF01578 Cytochrome C assembly protein LIT32_16835 PF05140 ResB-like family LIT32_16840 PF00578 AhpC/TSA family LIT32_16845 PF00849 RNA pseudouridylate synthase LIT32_16845 PF01479 S4 domain LIT32_16850 PF07670 Nucleoside recognition LIT32_16855 PF07670 Nucleoside recognition LIT32_16860 PF07943 Penicillin-binding protein 5, C-terminal domain LIT32_16860 PF00768 D-alanyl-D-alanine carboxypeptidase LIT32_16865 PF13047 Protein of unknown function (DUF3907) LIT32_16875 PF04079 Segregation and condensation complex subunit ScpB LIT32_16880 PF02616 Segregation and condensation protein ScpA LIT32_16885 PF09680 Family of unknown function LIT32_16890 PF03745 Domain of unknown function (DUF309) LIT32_16895 PF00583 Acetyltransferase (GNAT) family LIT32_16900 PF00885 6,7-dimethyl-8-ribityllumazine synthase LIT32_16905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LIT32_16905 PF00925 GTP cyclohydrolase II LIT32_16910 PF00677 Lumazine binding domain LIT32_16915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIT32_16915 PF01872 RibD C-terminal domain LIT32_16920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIT32_16925 PF06207 Protein of unknown function (DUF1002) LIT32_16930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LIT32_16930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LIT32_16935 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_16940 PF14097 Stage V sporulation protein AE1 LIT32_16945 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT32_16950 PF07451 Stage V sporulation protein AD (SpoVAD) LIT32_16955 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT32_16960 PF13782 Stage V sporulation protein AB LIT32_16965 PF12164 Stage V sporulation protein AA LIT32_16970 PF04542 Sigma-70 region 2 LIT32_16970 PF04539 Sigma-70 region 3 LIT32_16970 PF04545 Sigma-70, region 4 LIT32_16975 PF13581 Histidine kinase-like ATPase domain LIT32_16980 PF01740 STAS domain LIT32_16985 PF07943 Penicillin-binding protein 5, C-terminal domain LIT32_16985 PF00768 D-alanyl-D-alanine carboxypeptidase LIT32_16990 PF02885 Glycosyl transferase family, helical bundle domain LIT32_16990 PF00591 Glycosyl transferase family, a/b domain LIT32_16990 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LIT32_16995 PF01048 Phosphorylase superfamily LIT32_17000 PF01676 Metalloenzyme superfamily LIT32_17005 PF00589 Phage integrase family LIT32_17005 PF02899 Phage integrase, N-terminal SAM-like domain LIT32_17010 PF14004 Protein of unknown function (DUF4227) LIT32_17015 PF01475 Ferric uptake regulator family LIT32_17020 PF01944 Stage II sporulation protein M LIT32_17040 PF00293 NUDIX domain LIT32_17045 PF13072 Mother cell inhibitor of FtsZ LIT32_17050 PF00248 Aldo/keto reductase family LIT32_17065 PF00082 Subtilase family LIT32_17065 PF02225 PA domain LIT32_17065 PF05922 Peptidase inhibitor I9 LIT32_17065 PF13860 FlgD Ig-like domain LIT32_17085 PF01144 Coenzyme A transferase LIT32_17090 PF01144 Coenzyme A transferase LIT32_17095 PF00108 Thiolase, N-terminal domain LIT32_17095 PF02803 Thiolase, C-terminal domain LIT32_17100 PF00682 HMGL-like LIT32_17105 PF12146 Serine aminopeptidase, S33 LIT32_17110 PF10827 Protein of unknown function (DUF2552) LIT32_17125 PF08863 YolD-like protein LIT32_17130 PF00817 impB/mucB/samB family LIT32_17130 PF11799 impB/mucB/samB family C-terminal domain LIT32_17130 PF11798 IMS family HHH motif LIT32_17140 PF00106 short chain dehydrogenase LIT32_17145 PF00753 Metallo-beta-lactamase superfamily LIT32_17150 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT32_17150 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT32_17165 PF01546 Peptidase family M20/M25/M40 LIT32_17170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LIT32_17180 PF00471 Ribosomal protein L33 LIT32_17190 PF00753 Metallo-beta-lactamase superfamily LIT32_17190 PF12706 Beta-lactamase superfamily domain LIT32_17195 PF13344 Haloacid dehalogenase-like hydrolase LIT32_17195 PF00293 NUDIX domain LIT32_17200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LIT32_17200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LIT32_17205 PF07690 Major Facilitator Superfamily LIT32_17215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIT32_17215 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIT32_17220 PF11799 impB/mucB/samB family C-terminal domain LIT32_17220 PF11798 IMS family HHH motif LIT32_17220 PF00817 impB/mucB/samB family LIT32_17225 PF01625 Peptide methionine sulfoxide reductase LIT32_17230 PF07687 Peptidase dimerisation domain LIT32_17230 PF01546 Peptidase family M20/M25/M40 LIT32_17235 PF01039 Carboxyl transferase domain LIT32_17250 PF03734 L,D-transpeptidase catalytic domain LIT32_17255 PF06081 Aromatic acid exporter family member 1 LIT32_17255 PF11728 Putative aromatic acid exporter C-terminal domain LIT32_17260 PF00005 ABC transporter LIT32_17265 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_17270 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT32_17275 PF06491 Disulphide isomerase LIT32_17285 PF02310 B12 binding domain LIT32_17285 PF01642 Methylmalonyl-CoA mutase LIT32_17290 PF01642 Methylmalonyl-CoA mutase LIT32_17295 PF00781 Diacylglycerol kinase catalytic domain LIT32_17300 PF00364 Biotin-requiring enzyme LIT32_17300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIT32_17300 PF02817 e3 binding domain LIT32_17305 PF02779 Transketolase, pyrimidine binding domain LIT32_17305 PF02780 Transketolase, C-terminal domain LIT32_17310 PF00676 Dehydrogenase E1 component LIT32_17315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT32_17315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_17320 PF00871 Acetokinase family LIT32_17325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIT32_17325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIT32_17330 PF01515 Phosphate acetyl/butaryl transferase LIT32_17335 PF02954 Bacterial regulatory protein, Fis family LIT32_17335 PF00989 PAS fold LIT32_17335 PF00158 Sigma-54 interaction domain LIT32_17340 PF11118 Protein of unknown function (DUF2627) LIT32_17345 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_17350 PF14174 YycC-like protein LIT32_17355 PF07486 Cell Wall Hydrolase LIT32_17370 PF00072 Response regulator receiver domain LIT32_17370 PF08769 Sporulation initiation factor Spo0A C terminal LIT32_17375 PF17820 PDZ domain LIT32_17375 PF05580 SpoIVB peptidase S55 LIT32_17380 PF13476 AAA domain LIT32_17385 PF01316 Arginine repressor, DNA binding domain LIT32_17385 PF02863 Arginine repressor, C-terminal domain LIT32_17390 PF01728 FtsJ-like methyltransferase LIT32_17390 PF01479 S4 domain LIT32_17395 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LIT32_17395 PF02779 Transketolase, pyrimidine binding domain LIT32_17395 PF02780 Transketolase, C-terminal domain LIT32_17400 PF00348 Polyprenyl synthetase LIT32_17405 PF02609 Exonuclease VII small subunit LIT32_17410 PF02601 Exonuclease VII, large subunit LIT32_17410 PF13742 OB-fold nucleic acid binding domain LIT32_17415 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LIT32_17415 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LIT32_17420 PF01029 NusB family LIT32_17425 PF03780 Asp23 family, cell envelope-related function LIT32_17430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT32_17430 PF00289 Biotin carboxylase, N-terminal domain LIT32_17430 PF02785 Biotin carboxylase C-terminal domain LIT32_17435 PF00364 Biotin-requiring enzyme LIT32_17440 PF12685 SpoIIIAH-like protein LIT32_17450 PF09581 Stage III sporulation protein AF (Spore_III_AF) LIT32_17455 PF09546 Stage III sporulation protein AE (spore_III_AE) LIT32_17460 PF06686 Stage III sporulation protein AC/AD protein family LIT32_17465 PF06686 Stage III sporulation protein AC/AD protein family LIT32_17470 PF09548 Stage III sporulation protein AB (spore_III_AB) LIT32_17480 PF10942 Protein of unknown function (DUF2619) LIT32_17490 PF08207 Elongation factor P (EF-P) KOW-like domain LIT32_17490 PF01132 Elongation factor P (EF-P) OB domain LIT32_17490 PF09285 Elongation factor P, C-terminal LIT32_17495 PF00557 Metallopeptidase family M24 LIT32_17495 PF01321 Creatinase/Prolidase N-terminal domain LIT32_17500 PF01220 Dehydroquinase class II LIT32_17505 PF11085 Conserved membrane protein YqhR LIT32_17510 PF07136 Protein of unknown function (DUF1385) LIT32_17520 PF01734 Patatin-like phospholipase LIT32_17525 PF02742 Iron dependent repressor, metal binding and dimerisation domain LIT32_17525 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT32_17530 PF03477 ATP cone domain LIT32_17530 PF00317 Ribonucleotide reductase, all-alpha domain LIT32_17530 PF02867 Ribonucleotide reductase, barrel domain LIT32_17535 PF03099 Biotin/lipoate A/B protein ligase family LIT32_17540 PF00581 Rhodanese-like domain LIT32_17545 PF02347 Glycine cleavage system P-protein LIT32_17550 PF02347 Glycine cleavage system P-protein LIT32_17555 PF01571 Aminomethyltransferase folate-binding domain LIT32_17555 PF08669 Glycine cleavage T-protein C-terminal barrel domain LIT32_17560 PF00271 Helicase conserved C-terminal domain LIT32_17560 PF00176 SNF2 family N-terminal domain LIT32_17565 PF11079 Bacterial protein YqhG of unknown function LIT32_17575 PF01381 Helix-turn-helix LIT32_17575 PF08671 Anti-repressor SinI LIT32_17595 PF13028 Protein of unknown function (DUF3889) LIT32_17605 PF14038 YqzE-like protein LIT32_17610 PF01202 Shikimate kinase LIT32_17620 PF15980 Putative Competence protein ComGF LIT32_17630 PF07963 Prokaryotic N-terminal methylation motif LIT32_17635 PF07963 Prokaryotic N-terminal methylation motif LIT32_17640 PF00482 Type II secretion system (T2SS), protein F LIT32_17645 PF00437 Type II/IV secretion system protein LIT32_17660 PF03960 ArsC family LIT32_17665 PF11117 Protein of unknown function (DUF2626) LIT32_17675 PF00753 Metallo-beta-lactamase superfamily LIT32_17685 PF10958 Protein of unknown function (DUF2759) LIT32_17690 PF01910 Thiamine-binding protein LIT32_17700 PF00246 Zinc carboxypeptidase LIT32_17700 PF01476 LysM domain LIT32_17705 PF00884 Sulfatase LIT32_17710 PF00480 ROK family LIT32_17715 PF06014 Bacterial protein of unknown function (DUF910) LIT32_17720 PF01694 Rhomboid family LIT32_17735 PF01812 5-formyltetrahydrofolate cyclo-ligase family LIT32_17740 PF00471 Ribosomal protein L33 LIT32_17745 PF00483 Nucleotidyl transferase LIT32_17750 PF13439 Glycosyltransferase Family 4 LIT32_17750 PF00534 Glycosyl transferases group 1 LIT32_17770 PF01895 PhoU domain LIT32_17775 PF00005 ABC transporter LIT32_17780 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_17785 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_17790 PF12849 PBP superfamily domain LIT32_17795 PF03717 Penicillin-binding Protein dimerisation domain LIT32_17795 PF00905 Penicillin binding protein transpeptidase domain LIT32_17800 PF07690 Major Facilitator Superfamily LIT32_17805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIT32_17805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIT32_17810 PF04306 Protein of unknown function (DUF456) LIT32_17815 PF01895 PhoU domain LIT32_17820 PF06691 Protein of unknown function (DUF1189) LIT32_17825 PF00672 HAMP domain LIT32_17825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT32_17825 PF02743 Cache domain LIT32_17835 PF04551 GcpE protein LIT32_17850 PF01475 Ferric uptake regulator family LIT32_17855 PF00950 ABC 3 transport family LIT32_17860 PF00005 ABC transporter LIT32_17865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_17865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_17870 PF11116 Protein of unknown function (DUF2624) LIT32_17875 PF01261 Xylose isomerase-like TIM barrel LIT32_17880 PF00270 DEAD/DEAH box helicase LIT32_17880 PF00271 Helicase conserved C-terminal domain LIT32_17890 PF02401 LytB protein LIT32_17895 PF01784 NIF3 (NGG1p interacting factor 3) LIT32_17900 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LIT32_17905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIT32_17910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_17910 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_17910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_17915 PF03979 Sigma-70 factor, region 1.1 LIT32_17915 PF00140 Sigma-70 factor, region 1.2 LIT32_17915 PF04542 Sigma-70 region 2 LIT32_17915 PF04539 Sigma-70 region 3 LIT32_17915 PF04545 Sigma-70, region 4 LIT32_17920 PF01807 CHC2 zinc finger LIT32_17920 PF08275 DNA primase catalytic core, N-terminal domain LIT32_17920 PF10410 DnaB-helicase binding domain of primase LIT32_17925 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LIT32_17930 PF03618 Kinase/pyrophosphorylase LIT32_17935 PF00571 CBS domain LIT32_17935 PF08279 HTH domain LIT32_17940 PF02092 Glycyl-tRNA synthetase beta subunit LIT32_17945 PF02091 Glycyl-tRNA synthetase alpha subunit LIT32_17950 PF02565 Recombination protein O C terminal LIT32_17950 PF11967 Recombination protein O N terminal LIT32_17955 PF14006 YqzL-like protein LIT32_17960 PF01926 50S ribosome-binding GTPase LIT32_17960 PF07650 KH domain LIT32_17965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIT32_17970 PF01219 Prokaryotic diacylglycerol kinase LIT32_17975 PF02130 Uncharacterized protein family UPF0054 LIT32_17980 PF01966 HD domain LIT32_17980 PF07698 7TM receptor with intracellular HD hydrolase LIT32_17980 PF07697 7TM-HD extracellular LIT32_17985 PF02562 PhoH-like protein LIT32_17990 PF06898 Putative stage IV sporulation protein YqfD LIT32_17995 PF07873 YabP family LIT32_18055 PF12127 SigmaW regulon antibacterial LIT32_18060 PF01972 Serine dehydrogenase proteinase LIT32_18060 PF01957 NfeD-like C-terminal, partner-binding LIT32_18070 PF09424 Yqey-like protein LIT32_18075 PF01165 Ribosomal protein S21 LIT32_18080 PF02690 Na+/Pi-cotransporter LIT32_18085 PF01791 DeoC/LacD family aldolase LIT32_18090 PF01938 TRAM domain LIT32_18090 PF00919 Uncharacterized protein family UPF0004 LIT32_18090 PF04055 Radical SAM superfamily LIT32_18095 PF04452 RNA methyltransferase LIT32_18105 PF00684 DnaJ central domain LIT32_18105 PF00226 DnaJ domain LIT32_18105 PF01556 DnaJ C terminal domain LIT32_18110 PF00012 Hsp70 protein LIT32_18115 PF01025 GrpE LIT32_18120 PF01628 HrcA protein C terminal domain LIT32_18125 PF04055 Radical SAM superfamily LIT32_18125 PF06969 HemN C-terminal domain LIT32_18130 PF06421 GTP-binding protein LepA C-terminus LIT32_18130 PF03144 Elongation factor Tu domain 2 LIT32_18130 PF00009 Elongation factor Tu GTP binding domain LIT32_18130 PF00679 Elongation factor G C-terminus LIT32_18140 PF12438 Protein of unknown function (DUF3679) LIT32_18145 PF07454 Stage II sporulation protein P (SpoIIP) LIT32_18150 PF03418 Germination protease LIT32_18155 PF01649 Ribosomal protein S20 LIT32_18160 PF06144 DNA polymerase III, delta subunit LIT32_18165 PF14141 YqzM-like protein LIT32_18170 PF13567 Domain of unknown function (DUF4131) LIT32_18170 PF00753 Metallo-beta-lactamase superfamily LIT32_18170 PF03772 Competence protein LIT32_18175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIT32_18180 PF10531 SLBB domain LIT32_18185 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT32_18185 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT32_18190 PF13443 Cro/C1-type HTH DNA-binding domain LIT32_18195 PF11188 Protein of unknown function (DUF2975) LIT32_18200 PF13649 Methyltransferase domain LIT32_18210 PF01966 HD domain LIT32_18215 PF01467 Cytidylyltransferase-like LIT32_18220 PF01985 CRS1 / YhbY (CRM) domain LIT32_18225 PF01488 Shikimate / quinate 5-dehydrogenase LIT32_18225 PF08501 Shikimate dehydrogenase substrate binding domain LIT32_18225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LIT32_18230 PF01926 50S ribosome-binding GTPase LIT32_18240 PF08970 Sporulation inhibitor A LIT32_18245 PF02666 Phosphatidylserine decarboxylase LIT32_18250 PF01066 CDP-alcohol phosphatidyltransferase LIT32_18260 PF09501 Probable sporulation protein (Bac_small_yrzI) LIT32_18265 PF04545 Sigma-70, region 4 LIT32_18265 PF04542 Sigma-70 region 2 LIT32_18270 PF00657 GDSL-like Lipase/Acylhydrolase LIT32_18275 PF14143 YrhC-like protein LIT32_18280 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT32_18285 PF00291 Pyridoxal-phosphate dependent enzyme LIT32_18290 PF01048 Phosphorylase superfamily LIT32_18295 PF13649 Methyltransferase domain LIT32_18300 PF10750 Protein of unknown function (DUF2536) LIT32_18305 PF07423 Domain of unknown function (DUF1510) LIT32_18310 PF00905 Penicillin binding protein transpeptidase domain LIT32_18310 PF03717 Penicillin-binding Protein dimerisation domain LIT32_18315 PF01272 Transcription elongation factor, GreA/GreB, C-term LIT32_18315 PF03449 Transcription elongation factor, N-terminal LIT32_18320 PF00485 Phosphoribulokinase / Uridine kinase family LIT32_18325 PF01136 Peptidase family U32 LIT32_18325 PF16325 Peptidase family U32 C-terminal domain LIT32_18330 PF01136 Peptidase family U32 LIT32_18335 PF01596 O-methyltransferase LIT32_18340 PF02618 YceG-like family LIT32_18345 PF06949 Protein of unknown function (DUF1292) LIT32_18350 PF03652 Holliday junction resolvase LIT32_18355 PF06135 IreB regulatory phosphoprotein LIT32_18360 PF02272 DHHA1 domain LIT32_18360 PF01411 tRNA synthetases class II (A) LIT32_18360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT32_18365 PF01594 AI-2E family transporter LIT32_18380 PF14490 Helix-hairpin-helix containing domain LIT32_18380 PF13538 UvrD-like helicase C-terminal domain LIT32_18380 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LIT32_18395 PF00266 Aminotransferase class-V LIT32_18400 PF02082 Transcriptional regulator LIT32_18410 PF16193 AAA C-terminal domain LIT32_18410 PF12002 MgsA AAA+ ATPase C terminal LIT32_18410 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIT32_18415 PF00899 ThiF family LIT32_18425 PF02938 GAD domain LIT32_18425 PF01336 OB-fold nucleic acid binding domain LIT32_18425 PF00152 tRNA synthetases class II (D, K and N) LIT32_18430 PF13393 Histidyl-tRNA synthetase LIT32_18430 PF03129 Anticodon binding domain LIT32_18440 PF01520 N-acetylmuramoyl-L-alanine amidase LIT32_18440 PF08239 Bacterial SH3 domain LIT32_18445 PF02580 D-Tyr-tRNA(Tyr) deacylase LIT32_18450 PF02824 TGS domain LIT32_18450 PF13291 ACT domain LIT32_18450 PF04607 Region found in RelA / SpoT proteins LIT32_18455 PF00156 Phosphoribosyl transferase domain LIT32_18460 PF17768 RecJ OB domain LIT32_18460 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LIT32_18460 PF02272 DHHA1 domain LIT32_18460 PF01368 DHH family LIT32_18465 PF06305 Lipopolysaccharide assembly protein A domain LIT32_18470 PF02355 Protein export membrane protein LIT32_18470 PF07549 SecD/SecF GG Motif LIT32_18480 PF14667 Polysaccharide biosynthesis C-terminal domain LIT32_18480 PF01943 Polysaccharide biosynthesis protein LIT32_18485 PF04239 Protein of unknown function (DUF421) LIT32_18490 PF12670 Protein of unknown function (DUF3792) LIT32_18495 PF02699 Preprotein translocase subunit LIT32_18500 PF01702 Queuine tRNA-ribosyltransferase LIT32_18505 PF02547 Queuosine biosynthesis protein LIT32_18510 PF11146 Protein of unknown function (DUF2905) LIT32_18515 PF05491 RuvB C-terminal winged helix domain LIT32_18515 PF17864 RuvB AAA lid domain LIT32_18515 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIT32_18520 PF07499 RuvA, C-terminal domain LIT32_18520 PF01330 RuvA N terminal domain LIT32_18525 PF08955 BofC C-terminal domain LIT32_18525 PF08977 Bypass of Forespore C, N terminal LIT32_18550 PF02445 Quinolinate synthetase A protein LIT32_18555 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LIT32_18555 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LIT32_18560 PF00890 FAD binding domain LIT32_18560 PF02910 Fumarate reductase flavoprotein C-term LIT32_18565 PF00266 Aminotransferase class-V LIT32_18570 PF08279 HTH domain LIT32_18570 PF02829 3H domain LIT32_18575 PF01842 ACT domain LIT32_18575 PF00800 Prephenate dehydratase LIT32_18580 PF01842 ACT domain LIT32_18585 PF09269 Domain of unknown function (DUF1967) LIT32_18585 PF01926 50S ribosome-binding GTPase LIT32_18585 PF01018 GTP1/OBG LIT32_18590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIT32_18590 PF14682 Sporulation initiation phospho-transferase B, C-terminal LIT32_18595 PF01016 Ribosomal L27 protein LIT32_18600 PF04327 Cysteine protease Prp LIT32_18605 PF00829 Ribosomal prokaryotic L21 protein LIT32_18610 PF10150 Ribonuclease E/G family LIT32_18610 PF00575 S1 RNA binding domain LIT32_18615 PF02163 Peptidase family M50 LIT32_18620 PF01551 Peptidase family M23 LIT32_18625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LIT32_18630 PF03775 Septum formation inhibitor MinC, C-terminal domain LIT32_18635 PF04093 rod shape-determining protein MreD LIT32_18640 PF04085 rod shape-determining protein MreC LIT32_18650 PF04002 RadC-like JAB domain LIT32_18655 PF02545 Maf-like protein LIT32_18665 PF01478 Type IV leader peptidase family LIT32_18665 PF06750 Bacterial Peptidase A24 N-terminal domain LIT32_18670 PF00114 Pilin (bacterial filament) LIT32_18670 PF07963 Prokaryotic N-terminal methylation motif LIT32_18680 PF07694 5TMR of 5TMR-LYT LIT32_18680 PF00990 Diguanylate cyclase, GGDEF domain LIT32_18685 PF08245 Mur ligase middle domain LIT32_18685 PF02875 Mur ligase family, glutamate ligase domain LIT32_18690 PF08264 Anticodon-binding domain of tRNA LIT32_18690 PF00133 tRNA synthetases class I (I, L, M and V) LIT32_18690 PF10458 Valyl tRNA synthetase tRNA binding arm LIT32_18705 PF01476 LysM domain LIT32_18705 PF01476 LysM domain LIT32_18725 PF00202 Aminotransferase class-III LIT32_18730 PF00490 Delta-aminolevulinic acid dehydratase LIT32_18740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LIT32_18740 PF03900 Porphobilinogen deaminase, C-terminal domain LIT32_18745 PF01578 Cytochrome C assembly protein LIT32_18750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LIT32_18750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LIT32_18750 PF01488 Shikimate / quinate 5-dehydrogenase LIT32_18760 PF01926 50S ribosome-binding GTPase LIT32_18765 PF02190 ATP-dependent protease La (LON) substrate-binding domain LIT32_18765 PF05362 Lon protease (S16) C-terminal proteolytic domain LIT32_18765 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_18770 PF00004 ATPase family associated with various cellular activities (AAA) LIT32_18770 PF05362 Lon protease (S16) C-terminal proteolytic domain LIT32_18775 PF07724 AAA domain (Cdc48 subfamily) LIT32_18775 PF10431 C-terminal, D2-small domain, of ClpB protein LIT32_18775 PF06689 ClpX C4-type zinc finger LIT32_18780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIT32_18780 PF05698 Bacterial trigger factor protein (TF) C-terminus LIT32_18780 PF05697 Bacterial trigger factor protein (TF) LIT32_18790 PF00694 Aconitase C-terminal domain LIT32_18795 PF00330 Aconitase family (aconitate hydratase) LIT32_18800 PF00180 Isocitrate/isopropylmalate dehydrogenase LIT32_18805 PF00682 HMGL-like LIT32_18805 PF08502 LeuA allosteric (dimerisation) domain LIT32_18810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LIT32_18810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LIT32_18815 PF01842 ACT domain LIT32_18815 PF10369 Small subunit of acetolactate synthase LIT32_18820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT32_18820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT32_18820 PF00205 Thiamine pyrophosphate enzyme, central domain LIT32_18825 PF01063 Amino-transferase class IV LIT32_18835 PF12850 Calcineurin-like phosphoesterase superfamily domain LIT32_18840 PF01725 Ham1 family LIT32_18845 PF01138 3' exoribonuclease family, domain 1 LIT32_18845 PF03725 3' exoribonuclease family, domain 2 LIT32_18850 PF10646 Sporulation and spore germination LIT32_18855 PF01177 Asp/Glu/Hydantoin racemase LIT32_18860 PF01047 MarR family LIT32_18865 PF00196 Bacterial regulatory proteins, luxR family LIT32_18870 PF03061 Thioesterase superfamily LIT32_18875 PF13085 2Fe-2S iron-sulfur cluster binding domain LIT32_18875 PF13183 4Fe-4S dicluster domain LIT32_18880 PF02910 Fumarate reductase flavoprotein C-term LIT32_18880 PF00890 FAD binding domain LIT32_18885 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LIT32_18890 PF10702 Protein of unknown function (DUF2507) LIT32_18895 PF00696 Amino acid kinase family LIT32_18895 PF01842 ACT domain LIT32_18895 PF13840 ACT domain LIT32_18900 PF01541 GIY-YIG catalytic domain LIT32_18900 PF02151 UvrB/uvrC motif LIT32_18900 PF08459 UvrC Helix-hairpin-helix N-terminal LIT32_18905 PF00085 Thioredoxin LIT32_18910 PF00766 Electron transfer flavoprotein FAD-binding domain LIT32_18910 PF01012 Electron transfer flavoprotein domain LIT32_18915 PF01012 Electron transfer flavoprotein domain LIT32_18920 PF00378 Enoyl-CoA hydratase/isomerase LIT32_18925 PF00440 Bacterial regulatory proteins, tetR family LIT32_18925 PF08359 YsiA-like protein, C-terminal region LIT32_18930 PF13193 AMP-binding enzyme C-terminal domain LIT32_18930 PF00501 AMP-binding enzyme LIT32_18935 PF03994 Domain of Unknown Function (DUF350) LIT32_18940 PF00488 MutS domain V LIT32_18940 PF01713 Smr domain LIT32_18945 PF14791 DNA polymerase beta thumb LIT32_18945 PF14716 Helix-hairpin-helix domain LIT32_18945 PF02811 PHP domain LIT32_18950 PF02674 Colicin V production protein LIT32_18955 PF05164 Cell division protein ZapA LIT32_18960 PF11858 Domain of unknown function (DUF3378) LIT32_18960 PF01351 Ribonuclease HII LIT32_18970 PF02632 BioY family LIT32_18975 PF00202 Aminotransferase class-III LIT32_18980 PF03483 B3/4 domain LIT32_18980 PF03484 tRNA synthetase B5 domain LIT32_18980 PF03147 Ferredoxin-fold anticodon binding domain LIT32_18980 PF01588 Putative tRNA binding domain LIT32_18980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LIT32_18985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LIT32_18985 PF01409 tRNA synthetases class II core domain (F) LIT32_18990 PF00588 SpoU rRNA Methylase family LIT32_18990 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIT32_18995 PF14098 Small, acid-soluble spore protein I LIT32_19000 PF05343 M42 glutamyl aminopeptidase LIT32_19020 PF06961 Protein of unknown function (DUF1294) LIT32_19025 PF00453 Ribosomal protein L20 LIT32_19030 PF01632 Ribosomal protein L35 LIT32_19035 PF00707 Translation initiation factor IF-3, C-terminal domain LIT32_19035 PF05198 Translation initiation factor IF-3, N-terminal domain LIT32_19040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT32_19040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT32_19040 PF02824 TGS domain LIT32_19040 PF03129 Anticodon binding domain LIT32_19045 PF08812 YtxC-like family LIT32_19050 PF07319 Primosomal protein DnaI N-terminus LIT32_19050 PF01695 IstB-like ATP binding protein LIT32_19055 PF07261 Replication initiation and membrane attachment LIT32_19060 PF03477 ATP cone domain LIT32_19070 PF02675 S-adenosylmethionine decarboxylase LIT32_19075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIT32_19075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIT32_19080 PF01121 Dephospho-CoA kinase LIT32_19085 PF02659 Putative manganese efflux pump LIT32_19090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LIT32_19090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LIT32_19090 PF06827 Zinc finger found in FPG and IleRS LIT32_19095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIT32_19095 PF00476 DNA polymerase family A LIT32_19095 PF01367 5'-3' exonuclease, C-terminal SAM fold LIT32_19100 PF01145 SPFH domain / Band 7 family LIT32_19105 PF01145 SPFH domain / Band 7 family LIT32_19105 PF12221 Bacterial membrane protein N terminal LIT32_19110 PF16736 Single Cache-like LIT32_19110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_19110 PF00512 His Kinase A (phospho-acceptor) domain LIT32_19110 PF00989 PAS fold LIT32_19115 PF00486 Transcriptional regulatory protein, C terminal LIT32_19115 PF00072 Response regulator receiver domain LIT32_19125 PF00056 lactate/malate dehydrogenase, NAD binding domain LIT32_19125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIT32_19130 PF00180 Isocitrate/isopropylmalate dehydrogenase LIT32_19135 PF00285 Citrate synthase, C-terminal domain LIT32_19140 PF04284 Protein of unknown function (DUF441) LIT32_19145 PF01594 AI-2E family transporter LIT32_19150 PF04186 FxsA cytoplasmic membrane protein LIT32_19155 PF02887 Pyruvate kinase, alpha/beta domain LIT32_19155 PF00224 Pyruvate kinase, barrel domain LIT32_19155 PF00391 PEP-utilising enzyme, mobile domain LIT32_19160 PF00365 Phosphofructokinase LIT32_19165 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LIT32_19170 PF17848 Acetyl-coA carboxylase zinc finger domain LIT32_19170 PF01039 Carboxyl transferase domain LIT32_19175 PF00392 Bacterial regulatory proteins, gntR family LIT32_19180 PF03949 Malic enzyme, NAD binding domain LIT32_19180 PF00390 Malic enzyme, N-terminal domain LIT32_19185 PF01336 OB-fold nucleic acid binding domain LIT32_19185 PF02811 PHP domain LIT32_19185 PF14579 Helix-hairpin-helix motif LIT32_19185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT32_19185 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT32_19190 PF14034 Sporulation protein YtrH LIT32_19205 PF01368 DHH family LIT32_19205 PF02272 DHHA1 domain LIT32_19210 PF14007 YtpI-like protein LIT32_19215 PF00392 Bacterial regulatory proteins, gntR family LIT32_19215 PF03061 Thioesterase superfamily LIT32_19215 PF00571 CBS domain LIT32_19215 PF07085 DRTGG domain LIT32_19235 PF03845 Spore germination protein LIT32_19270 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIT32_19270 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LIT32_19295 PF14698 Argininosuccinate lyase C-terminal LIT32_19295 PF00206 Lyase LIT32_19300 PF00764 Arginosuccinate synthase LIT32_19310 PF00994 Probable molybdopterin binding domain LIT32_19320 PF03553 Na+/H+ antiporter family LIT32_19325 PF00871 Acetokinase family LIT32_19330 PF02384 N-6 DNA Methylase LIT32_19335 PF08534 Redoxin LIT32_19340 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LIT32_19350 PF06271 RDD family LIT32_19355 PF01343 Peptidase family S49 LIT32_19360 PF01513 ATP-NAD kinase LIT32_19365 PF07969 Amidohydrolase family LIT32_19370 PF13193 AMP-binding enzyme C-terminal domain LIT32_19370 PF00501 AMP-binding enzyme LIT32_19380 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT32_19385 PF02926 THUMP domain LIT32_19385 PF02568 Thiamine biosynthesis protein (ThiI) LIT32_19390 PF00266 Aminotransferase class-V LIT32_19395 PF05525 Branched-chain amino acid transport protein LIT32_19400 PF06160 Septation ring formation regulator, EzrA LIT32_19405 PF02811 PHP domain LIT32_19410 PF00440 Bacterial regulatory proteins, tetR family LIT32_19415 PF13185 GAF domain LIT32_19420 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT32_19425 PF00990 Diguanylate cyclase, GGDEF domain LIT32_19430 PF00163 Ribosomal protein S4/S9 N-terminal domain LIT32_19430 PF01479 S4 domain LIT32_19435 PF13333 Integrase core domain LIT32_19435 PF00665 Integrase core domain LIT32_19435 PF13276 HTH-like domain LIT32_19450 PF03358 NADPH-dependent FMN reductase LIT32_19475 PF00144 Beta-lactamase LIT32_19480 PF01676 Metalloenzyme superfamily LIT32_19485 PF01168 Alanine racemase, N-terminal domain LIT32_19490 PF00155 Aminotransferase class I and II LIT32_19495 PF02126 Phosphotriesterase family LIT32_19500 PF10797 Protein of unknown function LIT32_19505 PF10941 Protein of unknown function DUF2620 LIT32_19515 PF14502 Helix-turn-helix domain LIT32_19515 PF14503 YhfZ C-terminal domain LIT32_19520 PF00579 tRNA synthetases class I (W and Y) LIT32_19520 PF01479 S4 domain LIT32_19525 PF00905 Penicillin binding protein transpeptidase domain LIT32_19525 PF00912 Transglycosylase LIT32_19530 PF00501 AMP-binding enzyme LIT32_19530 PF13193 AMP-binding enzyme C-terminal domain LIT32_19535 PF00583 Acetyltransferase (GNAT) family LIT32_19540 PF00571 CBS domain LIT32_19545 PF00850 Histone deacetylase domain LIT32_19550 PF00356 Bacterial regulatory proteins, lacI family LIT32_19555 PF00793 DAHP synthetase I family LIT32_19555 PF01817 Chorismate mutase type II LIT32_19560 PF02491 SHS2 domain inserted in FTSA LIT32_19570 PF11009 Protein of unknown function (DUF2847) LIT32_19575 PF12732 YtxH-like protein LIT32_19580 PF06103 Bacterial protein of unknown function (DUF948) LIT32_19585 PF02073 Thermophilic metalloprotease (M29) LIT32_19590 PF02875 Mur ligase family, glutamate ligase domain LIT32_19590 PF01225 Mur ligase family, catalytic domain LIT32_19590 PF08245 Mur ligase middle domain LIT32_19595 PF01580 FtsK/SpoIIIE family LIT32_19595 PF09397 Ftsk gamma domain LIT32_19595 PF17854 FtsK alpha domain LIT32_19600 PF01588 Putative tRNA binding domain LIT32_19600 PF14794 Domain of unknown function (DUF4479) LIT32_19605 PF07285 Protein of unknown function (DUF1444) LIT32_19610 PF00085 Thioredoxin LIT32_19620 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ LIT32_19625 PF01931 Protein of unknown function DUF84 LIT32_19630 PF05343 M42 glutamyl aminopeptidase LIT32_19635 PF03413 Peptidase propeptide and YPEB domain LIT32_19640 PF00753 Metallo-beta-lactamase superfamily LIT32_19645 PF02390 Putative methyltransferase LIT32_19650 PF14165 YtzH-like protein LIT32_19655 PF01636 Phosphotransferase enzyme family LIT32_19660 PF00128 Alpha amylase, catalytic domain LIT32_19660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIT32_19660 PF17999 Pullulanase N1-terminal domain LIT32_19665 PF00781 Diacylglycerol kinase catalytic domain LIT32_19675 PF04172 LrgB-like family LIT32_19680 PF03788 LrgA family LIT32_19690 PF00291 Pyridoxal-phosphate dependent enzyme LIT32_19695 PF12832 MFS_1 like family LIT32_19700 PF01546 Peptidase family M20/M25/M40 LIT32_19705 PF00860 Permease family LIT32_19710 PF08220 DeoR-like helix-turn-helix domain LIT32_19715 PF00849 RNA pseudouridylate synthase LIT32_19715 PF01479 S4 domain LIT32_19720 PF01943 Polysaccharide biosynthesis protein LIT32_19720 PF14667 Polysaccharide biosynthesis C-terminal domain LIT32_19730 PF10957 Sporulation protein Cse60 LIT32_19740 PF00581 Rhodanese-like domain LIT32_19745 PF09334 tRNA synthetases class I (M) LIT32_19745 PF00133 tRNA synthetases class I (I, L, M and V) LIT32_19745 PF08264 Anticodon-binding domain of tRNA LIT32_19745 PF13603 Leucyl-tRNA synthetase, Domain 2 LIT32_19750 PF14074 Protein of unknown function (DUF4257) LIT32_19760 PF07690 Major Facilitator Superfamily LIT32_19770 PF02687 FtsX-like permease family LIT32_19770 PF12704 MacB-like periplasmic core domain LIT32_19775 PF00005 ABC transporter LIT32_19785 PF00005 ABC transporter LIT32_19790 PF00392 Bacterial regulatory proteins, gntR family LIT32_19800 PF10732 Protein of unknown function (DUF2524) LIT32_19805 PF04055 Radical SAM superfamily LIT32_19805 PF16199 Radical_SAM C-terminal domain LIT32_19810 PF06962 Putative rRNA methylase LIT32_19815 PF10776 Protein of unknown function (DUF2600) LIT32_19820 PF12146 Serine aminopeptidase, S33 LIT32_19825 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_19830 PF01569 PAP2 superfamily LIT32_19835 PF00534 Glycosyl transferases group 1 LIT32_19835 PF13439 Glycosyltransferase Family 4 LIT32_19840 PF13537 Glutamine amidotransferase domain LIT32_19840 PF00733 Asparagine synthase LIT32_19845 PF02772 S-adenosylmethionine synthetase, central domain LIT32_19845 PF02773 S-adenosylmethionine synthetase, C-terminal domain LIT32_19845 PF00438 S-adenosylmethionine synthetase, N-terminal domain LIT32_19850 PF01293 Phosphoenolpyruvate carboxykinase LIT32_19870 PF10763 Protein of unknown function (DUF2584) LIT32_19875 PF00326 Prolyl oligopeptidase family LIT32_19885 PF00005 ABC transporter LIT32_19890 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_19895 PF00082 Subtilase family LIT32_19905 PF00293 NUDIX domain LIT32_19920 PF00210 Ferritin-like domain LIT32_19930 PF00082 Subtilase family LIT32_19930 PF05922 Peptidase inhibitor I9 LIT32_19940 PF03773 Predicted permease LIT32_19945 PF02649 Type I GTP cyclohydrolase folE2 LIT32_19950 PF00253 Ribosomal protein S14p/S29e LIT32_19965 PF01842 ACT domain LIT32_19965 PF00551 Formyl transferase LIT32_19970 PF01554 MatE LIT32_19975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_19975 PF00005 ABC transporter LIT32_19980 PF00005 ABC transporter LIT32_19980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_19985 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_19990 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_19995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_20000 PF00892 EamA-like transporter family LIT32_20005 PF10100 Staphylopine dehydrogenase LIT32_20010 PF03059 Nicotianamine synthase protein LIT32_20015 PF02664 S-Ribosylhomocysteinase (LuxS) LIT32_20020 PF01809 Putative membrane protein insertion efficiency factor LIT32_20025 PF00484 Carbonic anhydrase LIT32_20030 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT32_20030 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT32_20035 PF01297 Zinc-uptake complex component A periplasmic LIT32_20035 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LIT32_20040 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT32_20040 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT32_20045 PF01197 Ribosomal protein L31 LIT32_20050 PF01654 Cytochrome bd terminal oxidase subunit I LIT32_20055 PF02322 Cytochrome bd terminal oxidase subunit II LIT32_20060 PF07561 Domain of Unknown Function (DUF1540) LIT32_20065 PF00950 ABC 3 transport family LIT32_20070 PF00950 ABC 3 transport family LIT32_20075 PF00005 ABC transporter LIT32_20080 PF01297 Zinc-uptake complex component A periplasmic LIT32_20085 PF13378 Enolase C-terminal domain-like LIT32_20085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT32_20090 PF00501 AMP-binding enzyme LIT32_20090 PF13193 AMP-binding enzyme C-terminal domain LIT32_20095 PF00378 Enoyl-CoA hydratase/isomerase LIT32_20100 PF00561 alpha/beta hydrolase fold LIT32_20105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT32_20105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT32_20105 PF16582 Middle domain of thiamine pyrophosphate LIT32_20110 PF00425 chorismate binding enzyme LIT32_20115 PF01040 UbiA prenyltransferase family LIT32_20120 PF01258 Prokaryotic dksA/traR C4-type zinc finger LIT32_20135 PF00343 Carbohydrate phosphorylase LIT32_20140 PF00534 Glycosyl transferases group 1 LIT32_20140 PF08323 Starch synthase catalytic domain LIT32_20145 PF00483 Nucleotidyl transferase LIT32_20150 PF00483 Nucleotidyl transferase LIT32_20155 PF02806 Alpha amylase, C-terminal all-beta domain LIT32_20155 PF00128 Alpha amylase, catalytic domain LIT32_20155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIT32_20280 PF00005 ABC transporter LIT32_20285 PF09084 NMT1/THI5 like LIT32_20290 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_20295 PF01910 Thiamine-binding protein LIT32_20300 PF09515 Thiamine transporter protein (Thia_YuaJ) LIT32_20315 PF00583 Acetyltransferase (GNAT) family LIT32_20330 PF13193 AMP-binding enzyme C-terminal domain LIT32_20330 PF00501 AMP-binding enzyme LIT32_20335 PF12867 DinB superfamily LIT32_20365 PF00561 alpha/beta hydrolase fold LIT32_20375 PF02361 Cobalt transport protein LIT32_20380 PF00005 ABC transporter LIT32_20385 PF09819 ABC-type cobalt transport system, permease component LIT32_20390 PF03070 TENA/THI-4/PQQC family LIT32_20395 PF01380 SIS domain LIT32_20395 PF01418 Helix-turn-helix domain, rpiR family LIT32_20400 PF02378 Phosphotransferase system, EIIC LIT32_20400 PF00367 phosphotransferase system, EIIB LIT32_20405 PF00155 Aminotransferase class I and II LIT32_20410 PF01042 Endoribonuclease L-PSP LIT32_20415 PF04072 Leucine carboxyl methyltransferase LIT32_20450 PF03606 C4-dicarboxylate anaerobic carrier LIT32_20455 PF01546 Peptidase family M20/M25/M40 LIT32_20460 PF03466 LysR substrate binding domain LIT32_20460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_20465 PF00881 Nitroreductase family LIT32_20485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_20485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_20495 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_20500 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_20505 PF01547 Bacterial extracellular solute-binding protein LIT32_20510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_20510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_20515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_20515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_20520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_20530 PF00480 ROK family LIT32_20530 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT32_20535 PF00535 Glycosyl transferase family 2 LIT32_20545 PF08244 Glycosyl hydrolases family 32 C terminal LIT32_20545 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIT32_20550 PF00294 pfkB family carbohydrate kinase LIT32_20555 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIT32_20555 PF08244 Glycosyl hydrolases family 32 C terminal LIT32_20565 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_20570 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_20580 PF01547 Bacterial extracellular solute-binding protein LIT32_20585 PF00072 Response regulator receiver domain LIT32_20585 PF12833 Helix-turn-helix domain LIT32_20590 PF06580 Histidine kinase LIT32_20590 PF07694 5TMR of 5TMR-LYT LIT32_20590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_20595 PF05547 Immune inhibitor A peptidase M6 LIT32_20610 PF00753 Metallo-beta-lactamase superfamily LIT32_20630 PF03880 DbpA RNA binding domain LIT32_20630 PF00270 DEAD/DEAH box helicase LIT32_20630 PF00271 Helicase conserved C-terminal domain LIT32_20635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT32_20635 PF13378 Enolase C-terminal domain-like LIT32_20645 PF01546 Peptidase family M20/M25/M40 LIT32_20645 PF07687 Peptidase dimerisation domain LIT32_20650 PF01418 Helix-turn-helix domain, rpiR family LIT32_20650 PF01380 SIS domain LIT32_20655 PF01476 LysM domain LIT32_20655 PF06725 3D domain LIT32_20660 PF00082 Subtilase family LIT32_20660 PF13860 FlgD Ig-like domain LIT32_20660 PF02225 PA domain LIT32_20660 PF05922 Peptidase inhibitor I9 LIT32_20670 PF00356 Bacterial regulatory proteins, lacI family LIT32_20675 PF01547 Bacterial extracellular solute-binding protein LIT32_20680 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_20685 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_20690 PF02056 Family 4 glycosyl hydrolase LIT32_20690 PF11975 Family 4 glycosyl hydrolase C-terminal domain LIT32_20695 PF01925 Sulfite exporter TauE/SafE LIT32_20700 PF06081 Aromatic acid exporter family member 1 LIT32_20705 PF00989 PAS fold LIT32_20705 PF13188 PAS domain LIT32_20705 PF13426 PAS domain LIT32_20705 PF00512 His Kinase A (phospho-acceptor) domain LIT32_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_20715 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_20720 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT32_20720 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT32_20740 PF01979 Amidohydrolase family LIT32_20750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_20755 PF02378 Phosphotransferase system, EIIC LIT32_20760 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIT32_20765 PF11975 Family 4 glycosyl hydrolase C-terminal domain LIT32_20765 PF02056 Family 4 glycosyl hydrolase LIT32_20780 PF07681 DoxX LIT32_20795 PF14579 Helix-hairpin-helix motif LIT32_20795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT32_20795 PF02811 PHP domain LIT32_20795 PF00929 Exonuclease LIT32_20795 PF11490 DNA polymerase III polC-type N-terminus II LIT32_20795 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT32_20800 PF00394 Multicopper oxidase LIT32_20800 PF07731 Multicopper oxidase LIT32_20800 PF07732 Multicopper oxidase LIT32_20805 PF13419 Haloacid dehalogenase-like hydrolase LIT32_20810 PF06445 GyrI-like small molecule binding domain LIT32_20810 PF12833 Helix-turn-helix domain LIT32_20815 PF00583 Acetyltransferase (GNAT) family LIT32_20825 PF00324 Amino acid permease LIT32_20830 PF00107 Zinc-binding dehydrogenase LIT32_20830 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_20845 PF03845 Spore germination protein LIT32_20850 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_20855 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_20865 PF00324 Amino acid permease LIT32_20870 PF09423 PhoD-like phosphatase LIT32_20870 PF16655 PhoD-like phosphatase, N-terminal domain LIT32_20885 PF08141 Small acid-soluble spore protein H family LIT32_20890 PF07690 Major Facilitator Superfamily LIT32_20895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_20895 PF03466 LysR substrate binding domain LIT32_20900 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LIT32_20900 PF01740 STAS domain LIT32_20905 PF01569 PAP2 superfamily LIT32_20910 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LIT32_20910 PF01740 STAS domain LIT32_20920 PF00989 PAS fold LIT32_20920 PF00512 His Kinase A (phospho-acceptor) domain LIT32_20920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_20920 PF13426 PAS domain LIT32_20920 PF13188 PAS domain LIT32_20930 PF00902 Sec-independent protein translocase protein (TatC) LIT32_20935 PF02416 mttA/Hcf106 family LIT32_20970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_20970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_20975 PF02308 MgtC family LIT32_20980 PF00873 AcrB/AcrD/AcrF family LIT32_20985 PF00440 Bacterial regulatory proteins, tetR family LIT32_21005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT32_21005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT32_21010 PF00294 pfkB family carbohydrate kinase LIT32_21015 PF00455 DeoR C terminal sensor domain LIT32_21015 PF08220 DeoR-like helix-turn-helix domain LIT32_21020 PF00005 ABC transporter LIT32_21020 PF00664 ABC transporter transmembrane region LIT32_21035 PF00375 Sodium:dicarboxylate symporter family LIT32_21050 PF04199 Putative cyclase LIT32_21055 PF00266 Aminotransferase class-V LIT32_21060 PF03060 Nitronate monooxygenase LIT32_21070 PF06103 Bacterial protein of unknown function (DUF948) LIT32_21075 PF12706 Beta-lactamase superfamily domain LIT32_21080 PF01894 Uncharacterised protein family UPF0047 LIT32_21085 PF16657 Maltogenic Amylase, C-terminal domain LIT32_21085 PF00128 Alpha amylase, catalytic domain LIT32_21095 PF01595 Cyclin M transmembrane N-terminal domain LIT32_21095 PF00571 CBS domain LIT32_21095 PF03471 Transporter associated domain LIT32_21100 PF00535 Glycosyl transferase family 2 LIT32_21105 PF11458 Membrane-integrating protein Mistic LIT32_21110 PF07885 Ion channel LIT32_21110 PF02254 TrkA-N domain LIT32_21115 PF08868 YugN-like family LIT32_21120 PF04463 Protein of unknown function (DUF523) LIT32_21140 PF00342 Phosphoglucose isomerase LIT32_21145 PF00465 Iron-containing alcohol dehydrogenase LIT32_21150 PF04070 Domain of unknown function (DUF378) LIT32_21155 PF00575 S1 RNA binding domain LIT32_21170 PF00155 Aminotransferase class I and II LIT32_21175 PF01037 Lrp/AsnC ligand binding domain LIT32_21180 PF00561 alpha/beta hydrolase fold LIT32_21180 PF08386 TAP-like protein LIT32_21190 PF00155 Aminotransferase class I and II LIT32_21195 PF00512 His Kinase A (phospho-acceptor) domain LIT32_21195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_21215 PF08810 Kinase associated protein B LIT32_21220 PF00929 Exonuclease LIT32_21225 PF07690 Major Facilitator Superfamily LIT32_21230 PF00905 Penicillin binding protein transpeptidase domain LIT32_21230 PF00912 Transglycosylase LIT32_21235 PF04134 Protein of unknown function, DUF393 LIT32_21240 PF17328 Family of unknown function (DUF5366) LIT32_21250 PF13244 Domain of unknown function (DUF4040) LIT32_21250 PF00361 Proton-conducting membrane transporter LIT32_21250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIT32_21255 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LIT32_21260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LIT32_21265 PF00361 Proton-conducting membrane transporter LIT32_21270 PF01899 Na+/H+ ion antiporter subunit LIT32_21275 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LIT32_21280 PF03334 Na+/H+ antiporter subunit LIT32_21290 PF13302 Acetyltransferase (GNAT) domain LIT32_21295 PF03061 Thioesterase superfamily LIT32_21300 PF07995 Glucose / Sorbosone dehydrogenase LIT32_21310 PF00196 Bacterial regulatory proteins, luxR family LIT32_21310 PF00072 Response regulator receiver domain LIT32_21315 PF07730 Histidine kinase LIT32_21315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_21320 PF05952 Bacillus competence pheromone ComX LIT32_21325 PF00348 Polyprenyl synthetase LIT32_21330 PF08181 DegQ (SacQ) family LIT32_21345 PF02743 Cache domain LIT32_21345 PF00672 HAMP domain LIT32_21345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LIT32_21350 PF01470 Pyroglutamyl peptidase LIT32_21355 PF13460 NAD(P)H-binding LIT32_21360 PF01323 DSBA-like thioredoxin domain LIT32_21365 PF02082 Transcriptional regulator LIT32_21370 PF00248 Aldo/keto reductase family LIT32_21375 PF18801 response regulator aspartate phosphatase H, N terminal LIT32_21385 PF00082 Subtilase family LIT32_21395 PF07997 Protein of unknown function (DUF1694) LIT32_21405 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LIT32_21405 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LIT32_21410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIT32_21410 PF00384 Molybdopterin oxidoreductase LIT32_21410 PF01568 Molydopterin dinucleotide binding domain LIT32_21415 PF00356 Bacterial regulatory proteins, lacI family LIT32_21425 PF01594 AI-2E family transporter LIT32_21430 PF01595 Cyclin M transmembrane N-terminal domain LIT32_21430 PF03471 Transporter associated domain LIT32_21430 PF00571 CBS domain LIT32_21435 PF13411 MerR HTH family regulatory protein LIT32_21440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIT32_21440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIT32_21445 PF01261 Xylose isomerase-like TIM barrel LIT32_21450 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_21455 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_21465 PF01055 Glycosyl hydrolases family 31 LIT32_21465 PF13802 Galactose mutarotase-like LIT32_21470 PF00480 ROK family LIT32_21475 PF01966 HD domain LIT32_21495 PF00106 short chain dehydrogenase LIT32_21500 PF02872 5'-nucleotidase, C-terminal domain LIT32_21500 PF00149 Calcineurin-like phosphoesterase LIT32_21505 PF17853 GGDEF-like domain LIT32_21505 PF13556 PucR C-terminal helix-turn-helix domain LIT32_21505 PF06018 CodY GAF-like domain LIT32_21510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIT32_21510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LIT32_21515 PF01323 DSBA-like thioredoxin domain LIT32_21520 PF00892 EamA-like transporter family LIT32_21525 PF00989 PAS fold LIT32_21525 PF13188 PAS domain LIT32_21525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_21525 PF00512 His Kinase A (phospho-acceptor) domain LIT32_21525 PF13426 PAS domain LIT32_21530 PF00174 Oxidoreductase molybdopterin binding domain LIT32_21535 PF02632 BioY family LIT32_21550 PF03553 Na+/H+ antiporter family LIT32_21550 PF13726 Na+-H+ antiporter family LIT32_21555 PF00883 Cytosol aminopeptidase family, catalytic domain LIT32_21555 PF02789 Cytosol aminopeptidase family, N-terminal domain LIT32_21565 PF02681 Divergent PAP2 family LIT32_21575 PF06725 3D domain LIT32_21580 PF14068 Putative membrane protein LIT32_21585 PF17302 Family of unknown function (DUF5351) LIT32_21590 PF00293 NUDIX domain LIT32_21590 PF13344 Haloacid dehalogenase-like hydrolase LIT32_21595 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_21600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_21615 PF01521 Iron-sulphur cluster biosynthesis LIT32_21620 PF01678 Diaminopimelate epimerase LIT32_21630 PF07293 Protein of unknown function (DUF1450) LIT32_21635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_21640 PF07315 Protein of unknown function (DUF1462) LIT32_21645 PF01106 NifU-like domain LIT32_21650 PF00326 Prolyl oligopeptidase family LIT32_21650 PF07676 WD40-like Beta Propeller Repeat LIT32_21655 PF00288 GHMP kinases N terminal domain LIT32_21655 PF08544 GHMP kinases C terminal LIT32_21660 PF00291 Pyridoxal-phosphate dependent enzyme LIT32_21665 PF01842 ACT domain LIT32_21665 PF03447 Homoserine dehydrogenase, NAD binding domain LIT32_21665 PF00742 Homoserine dehydrogenase LIT32_21675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT32_21675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT32_21685 PF04608 Phosphatidylglycerophosphatase A LIT32_21690 PF13344 Haloacid dehalogenase-like hydrolase LIT32_21695 PF01934 Protein of unknown function DUF86 LIT32_21710 PF06265 Protein of unknown function (DUF1027) LIT32_21715 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT32_21720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LIT32_21720 PF04055 Radical SAM superfamily LIT32_21725 PF01551 Peptidase family M23 LIT32_21730 PF09560 Sporulation protein YunB (Spo_YunB) LIT32_21735 PF08827 Domain of unknown function (DUF1805) LIT32_21740 PF02872 5'-nucleotidase, C-terminal domain LIT32_21745 PF01925 Sulfite exporter TauE/SafE LIT32_21750 PF01904 Protein of unknown function DUF72 LIT32_21755 PF05922 Peptidase inhibitor I9 LIT32_21755 PF00082 Subtilase family LIT32_21760 PF03358 NADPH-dependent FMN reductase LIT32_21765 PF01047 MarR family LIT32_21780 PF02557 D-alanyl-D-alanine carboxypeptidase LIT32_21790 PF01458 Uncharacterized protein family (UPF0051) LIT32_21795 PF01592 NifU-like N terminal domain LIT32_21800 PF00266 Aminotransferase class-V LIT32_21805 PF01458 Uncharacterized protein family (UPF0051) LIT32_21810 PF00005 ABC transporter LIT32_21815 PF02627 Carboxymuconolactone decarboxylase family LIT32_21820 PF03180 NLPA lipoprotein LIT32_21825 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_21830 PF00005 ABC transporter LIT32_21830 PF09383 NIL domain LIT32_21835 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT32_21845 PF00085 Thioredoxin LIT32_21850 PF01751 Toprim domain LIT32_21860 PF01597 Glycine cleavage H-protein LIT32_21865 PF03960 ArsC family LIT32_21870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_21870 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_21870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_21875 PF02803 Thiolase, C-terminal domain LIT32_21875 PF00108 Thiolase, N-terminal domain LIT32_21880 PF00378 Enoyl-CoA hydratase/isomerase LIT32_21880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT32_21880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT32_21890 PF01619 Proline dehydrogenase LIT32_21900 PF07875 Coat F domain LIT32_21905 PF07722 Peptidase C26 LIT32_21920 PF10835 Protein of unknown function (DUF2573) LIT32_21930 PF00005 ABC transporter LIT32_21935 PF01032 FecCD transport family LIT32_21940 PF01032 FecCD transport family LIT32_21945 PF01497 Periplasmic binding protein LIT32_21950 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_21950 PF18158 Adaptive response protein AidB N-terminal domain LIT32_21950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_21960 PF02386 Cation transport protein LIT32_21965 PF02254 TrkA-N domain LIT32_21965 PF02080 TrkA-C domain LIT32_21970 PF00375 Sodium:dicarboxylate symporter family LIT32_21985 PF02416 mttA/Hcf106 family LIT32_21990 PF13520 Amino acid permease LIT32_22000 PF02702 Osmosensitive K+ channel His kinase sensor domain LIT32_22005 PF02669 K+-transporting ATPase, c chain LIT32_22015 PF03814 Potassium-transporting ATPase A subunit LIT32_22025 PF00375 Sodium:dicarboxylate symporter family LIT32_22030 PF13520 Amino acid permease LIT32_22035 PF00768 D-alanyl-D-alanine carboxypeptidase LIT32_22035 PF07943 Penicillin-binding protein 5, C-terminal domain LIT32_22045 PF00893 Small Multidrug Resistance protein LIT32_22050 PF00893 Small Multidrug Resistance protein LIT32_22065 PF08281 Sigma-70, region 4 LIT32_22065 PF04542 Sigma-70 region 2 LIT32_22070 PF00356 Bacterial regulatory proteins, lacI family LIT32_22075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_22075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_22080 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22085 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22090 PF01547 Bacterial extracellular solute-binding protein LIT32_22095 PF04854 Protein of unknown function, DUF624 LIT32_22105 PF01380 SIS domain LIT32_22110 PF01116 Fructose-bisphosphate aldolase class-II LIT32_22115 PF00294 pfkB family carbohydrate kinase LIT32_22120 PF00480 ROK family LIT32_22125 PF00106 short chain dehydrogenase LIT32_22135 PF03180 NLPA lipoprotein LIT32_22140 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22145 PF09383 NIL domain LIT32_22145 PF00005 ABC transporter LIT32_22155 PF12146 Serine aminopeptidase, S33 LIT32_22165 PF00291 Pyridoxal-phosphate dependent enzyme LIT32_22175 PF08220 DeoR-like helix-turn-helix domain LIT32_22175 PF00455 DeoR C terminal sensor domain LIT32_22180 PF08402 TOBE domain LIT32_22180 PF00005 ABC transporter LIT32_22185 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22205 PF00989 PAS fold LIT32_22205 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIT32_22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_22205 PF17203 Single cache domain 3 LIT32_22210 PF08279 HTH domain LIT32_22210 PF00072 Response regulator receiver domain LIT32_22210 PF12431 Transcriptional regulator LIT32_22215 PF01554 MatE LIT32_22220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_22220 PF00005 ABC transporter LIT32_22225 PF00005 ABC transporter LIT32_22225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_22230 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22235 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_22245 PF03600 Citrate transporter LIT32_22250 PF00491 Arginase family LIT32_22255 PF07969 Amidohydrolase family LIT32_22260 PF17391 Urocanase N-terminal domain LIT32_22260 PF01175 Urocanase Rossmann-like domain LIT32_22260 PF17392 Urocanase C-terminal domain LIT32_22265 PF00221 Aromatic amino acid lyase LIT32_22270 PF09021 HutP LIT32_22275 PF02554 Carbon starvation protein CstA LIT32_22275 PF13722 5TM C-terminal transporter carbon starvation CstA LIT32_22280 PF00072 Response regulator receiver domain LIT32_22280 PF04397 LytTr DNA-binding domain LIT32_22285 PF07694 5TMR of 5TMR-LYT LIT32_22285 PF06580 Histidine kinase LIT32_22285 PF13492 GAF domain LIT32_22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_22290 PF02875 Mur ligase family, glutamate ligase domain LIT32_22290 PF01225 Mur ligase family, catalytic domain LIT32_22290 PF08245 Mur ligase middle domain LIT32_22295 PF13180 PDZ domain LIT32_22300 PF00486 Transcriptional regulatory protein, C terminal LIT32_22300 PF00072 Response regulator receiver domain LIT32_22305 PF00512 His Kinase A (phospho-acceptor) domain LIT32_22305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_22305 PF00672 HAMP domain LIT32_22315 PF01039 Carboxyl transferase domain LIT32_22320 PF00501 AMP-binding enzyme LIT32_22320 PF13193 AMP-binding enzyme C-terminal domain LIT32_22340 PF00206 Lyase LIT32_22340 PF10415 Fumarase C C-terminus LIT32_22360 PF00989 PAS fold LIT32_22360 PF13426 PAS domain LIT32_22360 PF13188 PAS domain LIT32_22360 PF00512 His Kinase A (phospho-acceptor) domain LIT32_22360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_22370 PF13667 ThiC-associated domain LIT32_22370 PF01964 Radical SAM ThiC family LIT32_22375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_22375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT32_22385 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_22385 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22390 PF01544 CorA-like Mg2+ transporter protein LIT32_22395 PF12679 ABC-2 family transporter protein LIT32_22400 PF00005 ABC transporter LIT32_22415 PF00365 Phosphofructokinase LIT32_22420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIT32_22420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIT32_22425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIT32_22425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIT32_22435 PF02447 GntP family permease LIT32_22445 PF01047 MarR family LIT32_22450 PF07690 Major Facilitator Superfamily LIT32_22460 PF13302 Acetyltransferase (GNAT) domain LIT32_22465 PF01494 FAD binding domain LIT32_22475 PF04199 Putative cyclase LIT32_22480 PF02525 Flavodoxin-like fold LIT32_22485 PF01638 HxlR-like helix-turn-helix LIT32_22515 PF01381 Helix-turn-helix LIT32_22535 PF01695 IstB-like ATP binding protein LIT32_22540 PF13302 Acetyltransferase (GNAT) domain LIT32_22550 PF00144 Beta-lactamase LIT32_22555 PF00194 Eukaryotic-type carbonic anhydrase LIT32_22570 PF03601 Conserved hypothetical protein 698 LIT32_22575 PF00578 AhpC/TSA family LIT32_22600 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22605 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_22610 PF01547 Bacterial extracellular solute-binding protein LIT32_22620 PF00356 Bacterial regulatory proteins, lacI family LIT32_22630 PF00781 Diacylglycerol kinase catalytic domain LIT32_22635 PF00929 Exonuclease LIT32_22635 PF14579 Helix-hairpin-helix motif LIT32_22635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT32_22635 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT32_22635 PF02811 PHP domain LIT32_22645 PF00909 Ammonium Transporter Family LIT32_22650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIT32_22650 PF00056 lactate/malate dehydrogenase, NAD binding domain LIT32_22655 PF00403 Heavy-metal-associated domain LIT32_22660 PF01022 Bacterial regulatory protein, arsR family LIT32_22665 PF01022 Bacterial regulatory protein, arsR family LIT32_22670 PF01545 Cation efflux family LIT32_22670 PF16916 Dimerisation domain of Zinc Transporter LIT32_22685 PF06628 Catalase-related immune-responsive LIT32_22685 PF00199 Catalase LIT32_22695 PF12679 ABC-2 family transporter protein LIT32_22700 PF00005 ABC transporter LIT32_22710 PF08000 Bacterial PH domain LIT32_22710 PF11724 YvbH-like oligomerisation region LIT32_22725 PF00455 DeoR C terminal sensor domain LIT32_22725 PF08220 DeoR-like helix-turn-helix domain LIT32_22740 PF02416 mttA/Hcf106 family LIT32_22755 PF00067 Cytochrome P450 LIT32_22765 PF01061 ABC-2 type transporter LIT32_22770 PF00005 ABC transporter LIT32_22770 PF13732 Domain of unknown function (DUF4162) LIT32_22790 PF01668 SmpB protein LIT32_22795 PF17876 Cold shock domain LIT32_22795 PF08206 Ribonuclease B OB domain LIT32_22795 PF00575 S1 RNA binding domain LIT32_22795 PF00773 RNB domain LIT32_22800 PF12146 Serine aminopeptidase, S33 LIT32_22805 PF03840 Preprotein translocase SecG subunit LIT32_22810 PF00892 EamA-like transporter family LIT32_22830 PF00113 Enolase, C-terminal TIM barrel domain LIT32_22830 PF03952 Enolase, N-terminal domain LIT32_22835 PF01676 Metalloenzyme superfamily LIT32_22835 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LIT32_22840 PF00121 Triosephosphate isomerase LIT32_22845 PF00162 Phosphoglycerate kinase LIT32_22850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIT32_22850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIT32_22855 PF04198 Putative sugar-binding domain LIT32_22865 PF00309 Sigma-54 factor, Activator interacting domain (AID) LIT32_22865 PF04963 Sigma-54 factor, core binding domain LIT32_22865 PF04552 Sigma-54, DNA binding domain LIT32_22870 PF09628 YvfG protein LIT32_22890 PF00574 Clp protease LIT32_22895 PF00381 PTS HPr component phosphorylation site LIT32_22900 PF02650 WhiA C-terminal HTH domain LIT32_22900 PF14527 WhiA LAGLIDADG-like domain LIT32_22900 PF10298 WhiA N-terminal LAGLIDADG-like domain LIT32_22905 PF01933 Uncharacterised protein family UPF0052 LIT32_22910 PF03668 P-loop ATPase protein family LIT32_22915 PF00293 NUDIX domain LIT32_22920 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_22930 PF01502 Phosphoribosyl-AMP cyclohydrolase LIT32_22930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LIT32_22935 PF00977 Histidine biosynthesis protein LIT32_22940 PF00977 Histidine biosynthesis protein LIT32_22945 PF00117 Glutamine amidotransferase class-I LIT32_22950 PF00475 Imidazoleglycerol-phosphate dehydratase LIT32_22955 PF00815 Histidinol dehydrogenase LIT32_22960 PF01634 ATP phosphoribosyltransferase LIT32_22965 PF13393 Histidyl-tRNA synthetase LIT32_22970 PF14602 Hexapeptide repeat of succinyl-transferase LIT32_22975 PF13419 Haloacid dehalogenase-like hydrolase LIT32_22980 PF07670 Nucleoside recognition LIT32_22985 PF01790 Prolipoprotein diacylglyceryl transferase LIT32_22990 PF02603 HPr Serine kinase N terminus LIT32_22990 PF07475 HPr Serine kinase C-terminal domain LIT32_22995 PF01520 N-acetylmuramoyl-L-alanine amidase LIT32_22995 PF05036 Sporulation related domain LIT32_23000 PF00149 Calcineurin-like phosphoesterase LIT32_23005 PF01741 Large-conductance mechanosensitive channel, MscL LIT32_23010 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LIT32_23020 PF13349 Putative adhesin LIT32_23030 PF17760 UvrA interaction domain LIT32_23030 PF17755 UvrA DNA-binding domain LIT32_23030 PF00005 ABC transporter LIT32_23035 PF02151 UvrB/uvrC motif LIT32_23035 PF04851 Type III restriction enzyme, res subunit LIT32_23035 PF00271 Helicase conserved C-terminal domain LIT32_23035 PF12344 Ultra-violet resistance protein B LIT32_23035 PF17757 UvrB interaction domain LIT32_23040 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) LIT32_23045 PF16658 Class II release factor RF3, C-terminal domain LIT32_23045 PF03144 Elongation factor Tu domain 2 LIT32_23045 PF00009 Elongation factor Tu GTP binding domain LIT32_23050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_23050 PF00512 His Kinase A (phospho-acceptor) domain LIT32_23050 PF00672 HAMP domain LIT32_23055 PF00072 Response regulator receiver domain LIT32_23055 PF00486 Transcriptional regulatory protein, C terminal LIT32_23060 PF02687 FtsX-like permease family LIT32_23060 PF12704 MacB-like periplasmic core domain LIT32_23065 PF00005 ABC transporter LIT32_23070 PF01546 Peptidase family M20/M25/M40 LIT32_23075 PF01546 Peptidase family M20/M25/M40 LIT32_23080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT32_23085 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_23085 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_23090 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_23095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_23095 PF00005 ABC transporter LIT32_23100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_23100 PF00005 ABC transporter LIT32_23105 PF07687 Peptidase dimerisation domain LIT32_23105 PF01546 Peptidase family M20/M25/M40 LIT32_23110 PF01497 Periplasmic binding protein LIT32_23115 PF00005 ABC transporter LIT32_23120 PF01032 FecCD transport family LIT32_23125 PF01032 FecCD transport family LIT32_23130 PF01047 MarR family LIT32_23140 PF01040 UbiA prenyltransferase family LIT32_23155 PF07739 TipAS antibiotic-recognition domain LIT32_23155 PF13411 MerR HTH family regulatory protein LIT32_23160 PF17820 PDZ domain LIT32_23170 PF03572 Peptidase family S41 LIT32_23170 PF01471 Putative peptidoglycan binding domain LIT32_23170 PF17820 PDZ domain LIT32_23175 PF04225 Opacity-associated protein A LysM-like domain LIT32_23175 PF01551 Peptidase family M23 LIT32_23180 PF02687 FtsX-like permease family LIT32_23180 PF18075 FtsX extracellular domain LIT32_23185 PF00005 ABC transporter LIT32_23190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIT32_23190 PF00032 Cytochrome b(C-terminal)/b6/petD LIT32_23195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_23195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_23205 PF07516 SecA Wing and Scaffold domain LIT32_23205 PF01043 SecA preprotein cross-linking domain LIT32_23205 PF02810 SEC-C motif LIT32_23205 PF07517 SecA DEAD-like domain LIT32_23215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LIT32_23215 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LIT32_23230 PF02561 Flagellar protein FliS LIT32_23235 PF07195 Flagellar hook-associated protein 2 C-terminus LIT32_23235 PF02465 Flagellar hook-associated protein 2 N-terminus LIT32_23240 PF03646 FlaG protein LIT32_23245 PF00669 Bacterial flagellin N-terminal helical region LIT32_23245 PF00700 Bacterial flagellin C-terminal helical region LIT32_23250 PF02599 Global regulator protein family LIT32_23255 PF02623 FliW protein LIT32_23265 PF00700 Bacterial flagellin C-terminal helical region LIT32_23265 PF00669 Bacterial flagellin N-terminal helical region LIT32_23270 PF00460 Flagella basal body rod protein LIT32_23270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT32_23275 PF05130 FlgN protein LIT32_23280 PF04316 Anti-sigma-28 factor, FlgM LIT32_23295 PF10719 Late competence development protein ComFB LIT32_23300 PF00271 Helicase conserved C-terminal domain LIT32_23300 PF04851 Type III restriction enzyme, res subunit LIT32_23310 PF02645 Uncharacterised protein, DegV family COG1307 LIT32_23315 PF00196 Bacterial regulatory proteins, luxR family LIT32_23315 PF00072 Response regulator receiver domain LIT32_23320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_23320 PF05384 Sensor protein DegS LIT32_23320 PF07730 Histidine kinase LIT32_23325 PF09186 Domain of unknown function (DUF1949) LIT32_23325 PF01205 Uncharacterized protein family UPF0029 LIT32_23330 PF03816 Cell envelope-related transcriptional attenuator domain LIT32_23335 PF00953 Glycosyl transferase family 4 LIT32_23350 PF02350 UDP-N-acetylglucosamine 2-epimerase LIT32_23355 PF13439 Glycosyltransferase Family 4 LIT32_23355 PF00534 Glycosyl transferases group 1 LIT32_23360 PF00005 ABC transporter LIT32_23360 PF01476 LysM domain LIT32_23365 PF01061 ABC-2 type transporter LIT32_23370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT32_23370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT32_23370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT32_23385 PF00535 Glycosyl transferase family 2 LIT32_23395 PF01520 N-acetylmuramoyl-L-alanine amidase LIT32_23400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT32_23400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT32_23400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT32_23405 PF00483 Nucleotidyl transferase LIT32_23410 PF08486 Stage II sporulation protein LIT32_23410 PF04122 Putative cell wall binding repeat 2 LIT32_23420 PF01520 N-acetylmuramoyl-L-alanine amidase LIT32_23420 PF08239 Bacterial SH3 domain LIT32_23425 PF06280 Fn3-like domain LIT32_23425 PF00082 Subtilase family LIT32_23425 PF00746 LPXTG cell wall anchor motif LIT32_23425 PF02225 PA domain LIT32_23430 PF04122 Putative cell wall binding repeat 2 LIT32_23430 PF08486 Stage II sporulation protein LIT32_23440 PF00877 NlpC/P60 family LIT32_23440 PF01476 LysM domain LIT32_23450 PF03816 Cell envelope-related transcriptional attenuator domain LIT32_23455 PF02810 SEC-C motif LIT32_23455 PF07516 SecA Wing and Scaffold domain LIT32_23455 PF01043 SecA preprotein cross-linking domain LIT32_23455 PF07517 SecA DEAD-like domain LIT32_23475 PF05901 Excalibur calcium-binding domain LIT32_23480 PF04909 Amidohydrolase LIT32_23485 PF05025 RbsD / FucU transport protein family LIT32_23490 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT32_23505 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LIT32_23510 PF08666 SAF domain LIT32_23510 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LIT32_23525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_23525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_23540 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_23545 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_23550 PF04854 Protein of unknown function, DUF624 LIT32_23555 PF12833 Helix-turn-helix domain LIT32_23555 PF02311 AraC-like ligand binding domain LIT32_23560 PF02449 Beta-galactosidase LIT32_23560 PF08533 Beta-galactosidase C-terminal domain LIT32_23560 PF08532 Beta-galactosidase trimerisation domain LIT32_23580 PF00480 ROK family LIT32_23600 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT32_23605 PF02811 PHP domain LIT32_23605 PF14716 Helix-hairpin-helix domain LIT32_23605 PF14791 DNA polymerase beta thumb LIT32_23610 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_23615 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_23625 PF00356 Bacterial regulatory proteins, lacI family LIT32_23625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIT32_23630 PF01050 Mannose-6-phosphate isomerase LIT32_23630 PF00483 Nucleotidyl transferase LIT32_23655 PF00132 Bacterial transferase hexapeptide (six repeats) LIT32_23665 PF02397 Bacterial sugar transferase LIT32_23670 PF00483 Nucleotidyl transferase LIT32_23675 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT32_23675 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT32_23675 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT32_23685 PF13614 AAA domain LIT32_23690 PF13807 G-rich domain on putative tyrosine kinase LIT32_23690 PF02706 Chain length determinant protein LIT32_23700 PF04434 SWIM zinc finger LIT32_23705 PF00271 Helicase conserved C-terminal domain LIT32_23705 PF00176 SNF2 family N-terminal domain LIT32_23705 PF12419 SNF2 Helicase protein LIT32_23715 PF00436 Single-strand binding protein family LIT32_23725 PF14183 YwpF-like protein LIT32_23740 PF07977 FabA-like domain LIT32_23750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT32_23750 PF00460 Flagella basal body rod protein LIT32_23755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT32_23755 PF00460 Flagella basal body rod protein LIT32_23765 PF12116 Stage III sporulation protein D LIT32_23770 PF01551 Peptidase family M23 LIT32_23780 PF00583 Acetyltransferase (GNAT) family LIT32_23785 PF08486 Stage II sporulation protein LIT32_23795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIT32_23800 PF08680 TATA-box binding LIT32_23805 PF06612 Protein of unknown function (DUF1146) LIT32_23810 PF00361 Proton-conducting membrane transporter LIT32_23815 PF00361 Proton-conducting membrane transporter LIT32_23820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIT32_23820 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LIT32_23820 PF00361 Proton-conducting membrane transporter LIT32_23825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LIT32_23830 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LIT32_23840 PF00146 NADH dehydrogenase LIT32_23845 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LIT32_23850 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LIT32_23855 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LIT32_23860 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LIT32_23870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_23870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_23875 PF01266 FAD dependent oxidoreductase LIT32_23895 PF00083 Sugar (and other) transporter LIT32_23900 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LIT32_23900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LIT32_23905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT32_23905 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIT32_23910 PF00231 ATP synthase LIT32_23915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT32_23915 PF00306 ATP synthase alpha/beta chain, C terminal domain LIT32_23915 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIT32_23920 PF00213 ATP synthase delta (OSCP) subunit LIT32_23925 PF00430 ATP synthase B/B' CF(0) LIT32_23930 PF00137 ATP synthase subunit C LIT32_23935 PF00119 ATP synthase A chain LIT32_23940 PF03899 ATP synthase I chain LIT32_23950 PF05922 Peptidase inhibitor I9 LIT32_23950 PF13860 FlgD Ig-like domain LIT32_23950 PF00082 Subtilase family LIT32_23950 PF02225 PA domain LIT32_23960 PF02806 Alpha amylase, C-terminal all-beta domain LIT32_23960 PF01833 IPT/TIG domain LIT32_23960 PF00128 Alpha amylase, catalytic domain LIT32_23960 PF00686 Starch binding domain LIT32_23965 PF02673 Bacitracin resistance protein BacA LIT32_23970 PF00464 Serine hydroxymethyltransferase LIT32_23975 PF04260 Protein of unknown function (DUF436) LIT32_23980 PF02502 Ribose/Galactose Isomerase LIT32_23985 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT32_23990 PF02659 Putative manganese efflux pump LIT32_23995 PF01300 Telomere recombination LIT32_23995 PF03481 Putative GTP-binding controlling metal-binding LIT32_24005 PF09551 Stage II sporulation protein R (spore_II_R) LIT32_24015 PF13847 Methyltransferase domain LIT32_24015 PF17827 PrmC N-terminal domain LIT32_24020 PF03462 PCRF domain LIT32_24020 PF00472 RF-1 domain LIT32_24025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_24030 PF13411 MerR HTH family regulatory protein LIT32_24040 PF00265 Thymidine kinase LIT32_24045 PF01197 Ribosomal protein L31 LIT32_24050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT32_24050 PF07498 Rho termination factor, N-terminal domain LIT32_24050 PF07497 Rho termination factor, RNA-binding domain LIT32_24055 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LIT32_24060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIT32_24065 PF00923 Transaldolase/Fructose-6-phosphate aldolase LIT32_24070 PF01116 Fructose-bisphosphate aldolase class-II LIT32_24075 PF00072 Response regulator receiver domain LIT32_24080 PF10740 Domain of unknown function (DUF2529) LIT32_24085 PF06418 CTP synthase N-terminus LIT32_24085 PF00117 Glutamine amidotransferase class-I LIT32_24090 PF05066 HB1, ASXL, restriction endonuclease HTH domain LIT32_24095 PF05816 Toxic anion resistance protein (TelA) LIT32_24100 PF14266 Putative component of 'biosynthetic module' LIT32_24130 PF02342 TerD domain LIT32_24135 PF02342 TerD domain LIT32_24145 PF02310 B12 binding domain LIT32_24145 PF01642 Methylmalonyl-CoA mutase LIT32_24155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_24155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_24155 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_24160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT32_24160 PF02770 Acyl-CoA dehydrogenase, middle domain LIT32_24160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT32_24165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT32_24165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT32_24170 PF02803 Thiolase, C-terminal domain LIT32_24170 PF00108 Thiolase, N-terminal domain LIT32_24175 PF02754 Cysteine-rich domain LIT32_24175 PF13183 4Fe-4S dicluster domain LIT32_24180 PF13091 PLD-like domain LIT32_24185 PF03851 UV-endonuclease UvdE LIT32_24190 PF00750 tRNA synthetases class I (R) LIT32_24190 PF03485 Arginyl tRNA synthetase N terminal domain LIT32_24190 PF05746 DALR anticodon binding domain LIT32_24195 PF09148 Domain of unknown function (DUF1934) LIT32_24200 PF00491 Arginase family LIT32_24205 PF17284 Spermidine synthase tetramerisation domain LIT32_24210 PF00912 Transglycosylase LIT32_24210 PF00905 Penicillin binding protein transpeptidase domain LIT32_24215 PF08741 YwhD family LIT32_24220 PF02163 Peptidase family M50 LIT32_24225 PF01361 Tautomerase enzyme LIT32_24235 PF01966 HD domain LIT32_24240 PF07293 Protein of unknown function (DUF1450) LIT32_24250 PF03099 Biotin/lipoate A/B protein ligase family LIT32_24255 PF01515 Phosphate acetyl/butaryl transferase LIT32_24260 PF06778 Chlorite dismutase LIT32_24270 PF09671 Spore coat protein (Spore_GerQ) LIT32_24280 PF04241 Protein of unknown function (DUF423) LIT32_24300 PF11181 Heat induced stress protein YflT LIT32_24305 PF03167 Uracil DNA glycosylase superfamily LIT32_24310 PF01022 Bacterial regulatory protein, arsR family LIT32_24315 PF00106 short chain dehydrogenase LIT32_24320 PF00535 Glycosyl transferase family 2 LIT32_24325 PF11181 Heat induced stress protein YflT LIT32_24355 PF08361 MAATS-type transcriptional repressor, C-terminal region LIT32_24355 PF00440 Bacterial regulatory proteins, tetR family LIT32_24360 PF08543 Phosphomethylpyrimidine kinase LIT32_24365 PF08244 Glycosyl hydrolases family 32 C terminal LIT32_24365 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIT32_24370 PF00294 pfkB family carbohydrate kinase LIT32_24375 PF02378 Phosphotransferase system, EIIC LIT32_24375 PF00367 phosphotransferase system, EIIB LIT32_24380 PF03123 CAT RNA binding domain LIT32_24380 PF00874 PRD domain LIT32_24385 PF02417 Chromate transporter LIT32_24390 PF02417 Chromate transporter LIT32_24400 PF13404 AsnC-type helix-turn-helix domain LIT32_24400 PF01037 Lrp/AsnC ligand binding domain LIT32_24410 PF00881 Nitroreductase family LIT32_24415 PF07670 Nucleoside recognition LIT32_24425 PF17368 Spore morphogenesis and germination YwcE LIT32_24430 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LIT32_24435 PF00510 Cytochrome c oxidase subunit III LIT32_24440 PF00115 Cytochrome C and Quinol oxidase polypeptide I LIT32_24445 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LIT32_24445 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LIT32_24450 PF01131 DNA topoisomerase LIT32_24450 PF01751 Toprim domain LIT32_24460 PF00005 ABC transporter LIT32_24460 PF12848 ABC transporter LIT32_24470 PF00248 Aldo/keto reductase family LIT32_24475 PF09339 IclR helix-turn-helix domain LIT32_24475 PF01614 Bacterial transcriptional regulator LIT32_24480 PF03812 2-keto-3-deoxygluconate permease LIT32_24490 PF04962 KduI/IolB family LIT32_24500 PF00270 DEAD/DEAH box helicase LIT32_24500 PF00271 Helicase conserved C-terminal domain LIT32_24505 PF00067 Cytochrome P450 LIT32_24515 PF09962 Uncharacterized conserved protein (DUF2196) LIT32_24530 PF13302 Acetyltransferase (GNAT) domain LIT32_24540 PF10672 S-adenosylmethionine-dependent methyltransferase LIT32_24540 PF17785 PUA-like domain LIT32_24555 PF00107 Zinc-binding dehydrogenase LIT32_24555 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_24565 PF00849 RNA pseudouridylate synthase LIT32_24565 PF01479 S4 domain LIT32_24570 PF17355 Family of unknown function (DUF5383) LIT32_24580 PF01580 FtsK/SpoIIIE family LIT32_24580 PF12538 DNA transporter LIT32_24585 PF10140 WXG100 protein secretion system (Wss), protein YukC LIT32_24590 PF08817 WXG100 protein secretion system (Wss), protein YukD LIT32_24595 PF06013 Proteins of 100 residues with WXG LIT32_24615 PF01546 Peptidase family M20/M25/M40 LIT32_24615 PF07687 Peptidase dimerisation domain LIT32_24620 PF00128 Alpha amylase, catalytic domain LIT32_24620 PF09154 Domain of unknown function (DUF1939) LIT32_24625 PF13426 PAS domain LIT32_24625 PF00512 His Kinase A (phospho-acceptor) domain LIT32_24625 PF00672 HAMP domain LIT32_24625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_24630 PF00072 Response regulator receiver domain LIT32_24630 PF00486 Transcriptional regulatory protein, C terminal LIT32_24640 PF02245 Methylpurine-DNA glycosylase (MPG) LIT32_24645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_24645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_24650 PF07687 Peptidase dimerisation domain LIT32_24650 PF01546 Peptidase family M20/M25/M40 LIT32_24665 PF00005 ABC transporter LIT32_24665 PF08402 TOBE domain LIT32_24670 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_24675 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_24680 PF13416 Bacterial extracellular solute-binding protein LIT32_24685 PF00183 Hsp90 protein LIT32_24690 PF01047 MarR family LIT32_24695 PF07690 Major Facilitator Superfamily LIT32_24700 PF02574 Homocysteine S-methyltransferase LIT32_24705 PF00324 Amino acid permease LIT32_24710 PF00072 Response regulator receiver domain LIT32_24710 PF00486 Transcriptional regulatory protein, C terminal LIT32_24715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_24720 PF00005 ABC transporter LIT32_24740 PF06039 Malate:quinone oxidoreductase (Mqo) LIT32_24750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT32_24750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT32_24750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT32_24755 PF00483 Nucleotidyl transferase LIT32_24760 PF00535 Glycosyl transferase family 2 LIT32_24765 PF00005 ABC transporter LIT32_24770 PF02687 FtsX-like permease family LIT32_24770 PF12704 MacB-like periplasmic core domain LIT32_24775 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT32_24785 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LIT32_24785 PF13229 Right handed beta helix region LIT32_24785 PF12708 Pectate lyase superfamily protein LIT32_24795 PF17760 UvrA interaction domain LIT32_24795 PF17755 UvrA DNA-binding domain LIT32_24795 PF00005 ABC transporter LIT32_24805 PF00027 Cyclic nucleotide-binding domain LIT32_24810 PF12832 MFS_1 like family LIT32_24830 PF02590 Predicted SPOUT methyltransferase LIT32_24835 PF14116 YyzF-like protein LIT32_24840 PF13180 PDZ domain LIT32_24845 PF00753 Metallo-beta-lactamase superfamily LIT32_24850 PF09648 YycH protein LIT32_24855 PF07435 YycH protein LIT32_24860 PF00672 HAMP domain LIT32_24860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_24860 PF00512 His Kinase A (phospho-acceptor) domain LIT32_24860 PF13426 PAS domain LIT32_24865 PF00072 Response regulator receiver domain LIT32_24865 PF00486 Transcriptional regulatory protein, C terminal LIT32_24870 PF01551 Peptidase family M23 LIT32_24870 PF01476 LysM domain LIT32_24870 PF08525 Opacity-associated protein A N-terminal motif LIT32_24880 PF00709 Adenylosuccinate synthetase LIT32_24885 PF00772 DnaB-like helicase N terminal domain LIT32_24885 PF03796 DnaB-like helicase C terminal domain LIT32_24890 PF01281 Ribosomal protein L9, N-terminal domain LIT32_24890 PF03948 Ribosomal protein L9, C-terminal domain LIT32_24895 PF02272 DHHA1 domain LIT32_24895 PF01368 DHH family LIT32_24900 PF09991 Predicted membrane protein (DUF2232) LIT32_24905 PF01084 Ribosomal protein S18 LIT32_24910 PF00436 Single-strand binding protein family LIT32_24915 PF01250 Ribosomal protein S6 LIT32_24920 PF01926 50S ribosome-binding GTPase LIT32_24920 PF06071 Protein of unknown function (DUF933) LIT32_24925 PF06107 Bacterial protein of unknown function (DUF951) LIT32_24930 PF00924 Mechanosensitive ion channel LIT32_24935 PF06866 Protein of unknown function (DUF1256) LIT32_24945 PF02195 ParB-like nuclease domain LIT32_24945 PF17762 HTH domain found in ParB protein LIT32_24950 PF13614 AAA domain LIT32_24955 PF17762 HTH domain found in ParB protein LIT32_24955 PF02195 ParB-like nuclease domain LIT32_24960 PF02527 rRNA small subunit methyltransferase G LIT32_24965 PF13932 GidA associated domain LIT32_24965 PF01134 Glucose inhibited division protein A LIT32_24970 PF01926 50S ribosome-binding GTPase LIT32_24970 PF12631 MnmE helical domain LIT32_24970 PF10396 GTP-binding protein TrmE N-terminus LIT32_24975 PF01424 R3H domain LIT32_24975 PF14804 Jag N-terminus LIT32_24980 PF02096 60Kd inner membrane protein LIT32_24985 PF00825 Ribonuclease P LIT32_24990 PF00468 Ribosomal protein L34 LIT32_24995 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_25000 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_25015 PF06719 AraC-type transcriptional regulator N-terminus LIT32_25015 PF12833 Helix-turn-helix domain LIT32_25020 PF02525 Flavodoxin-like fold LIT32_25025 PF00106 short chain dehydrogenase LIT32_25030 PF02525 Flavodoxin-like fold LIT32_25040 PF00355 Rieske [2Fe-2S] domain LIT32_25050 PF00440 Bacterial regulatory proteins, tetR family LIT32_25055 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LIT32_25060 PF07690 Major Facilitator Superfamily LIT32_25125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_25130 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_25135 PF00583 Acetyltransferase (GNAT) family LIT32_25145 PF10997 Alternate to MurJ LIT32_25185 PF07875 Coat F domain LIT32_25190 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_25190 PF13823 Alcohol dehydrogenase GroES-associated LIT32_25190 PF00107 Zinc-binding dehydrogenase LIT32_25200 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT32_25200 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT32_25210 PF00253 Ribosomal protein S14p/S29e LIT32_25220 PF07454 Stage II sporulation protein P (SpoIIP) LIT32_25255 PF13302 Acetyltransferase (GNAT) domain LIT32_25265 PF08264 Anticodon-binding domain of tRNA LIT32_25265 PF09334 tRNA synthetases class I (M) LIT32_25300 PF09924 Uncharacterised conserved protein (DUF2156) LIT32_25300 PF03706 Lysylphosphatidylglycerol synthase TM region LIT32_25305 PF01638 HxlR-like helix-turn-helix LIT32_25310 PF00881 Nitroreductase family LIT32_25320 PF01979 Amidohydrolase family LIT32_25335 PF00857 Isochorismatase family LIT32_25350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_25355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT32_25360 PF01738 Dienelactone hydrolase family LIT32_25365 PF00561 alpha/beta hydrolase fold LIT32_25375 PF11188 Protein of unknown function (DUF2975) LIT32_25380 PF13443 Cro/C1-type HTH DNA-binding domain LIT32_25390 PF01047 MarR family LIT32_25395 PF00583 Acetyltransferase (GNAT) family LIT32_25400 PF04299 Putative FMN-binding domain LIT32_25405 PF00293 NUDIX domain LIT32_25410 PF00302 Chloramphenicol acetyltransferase LIT32_25430 PF00701 Dihydrodipicolinate synthetase family LIT32_25435 PF00884 Sulfatase LIT32_25445 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT32_25445 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT32_25450 PF00440 Bacterial regulatory proteins, tetR family LIT32_25455 PF06441 Epoxide hydrolase N terminus LIT32_25470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_25470 PF03466 LysR substrate binding domain LIT32_25485 PF00082 Subtilase family LIT32_25485 PF05922 Peptidase inhibitor I9 LIT32_25510 PF08818 Domain of unknown function (DU1801) LIT32_25525 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_25535 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_25540 PF00842 Alanine racemase, C-terminal domain LIT32_25540 PF01168 Alanine racemase, N-terminal domain LIT32_25555 PF00733 Asparagine synthase LIT32_25555 PF13537 Glutamine amidotransferase domain LIT32_25565 PF03845 Spore germination protein LIT32_25570 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_25575 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_25580 PF02082 Transcriptional regulator LIT32_25590 PF02627 Carboxymuconolactone decarboxylase family LIT32_25600 PF01641 SelR domain LIT32_25600 PF01625 Peptide methionine sulfoxide reductase LIT32_25605 PF01641 SelR domain LIT32_25615 PF09335 SNARE associated Golgi protein LIT32_25620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT32_25620 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_25620 PF00403 Heavy-metal-associated domain LIT32_25625 PF13416 Bacterial extracellular solute-binding protein LIT32_25640 PF00005 ABC transporter LIT32_25640 PF08402 TOBE domain LIT32_25660 PF06580 Histidine kinase LIT32_25660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_25660 PF00672 HAMP domain LIT32_25660 PF02743 Cache domain LIT32_25665 PF00072 Response regulator receiver domain LIT32_25665 PF12833 Helix-turn-helix domain LIT32_25675 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_25680 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_25700 PF05922 Peptidase inhibitor I9 LIT32_25700 PF00082 Subtilase family LIT32_25705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT32_25705 PF03466 LysR substrate binding domain LIT32_25715 PF02566 OsmC-like protein LIT32_25720 PF02566 OsmC-like protein LIT32_25725 PF02566 OsmC-like protein LIT32_25730 PF02566 OsmC-like protein LIT32_25735 PF02566 OsmC-like protein LIT32_25740 PF00582 Universal stress protein family LIT32_25745 PF07690 Major Facilitator Superfamily LIT32_25750 PF04439 Streptomycin adenylyltransferase LIT32_25760 PF00158 Sigma-54 interaction domain LIT32_25760 PF13426 PAS domain LIT32_25760 PF02954 Bacterial regulatory protein, Fis family LIT32_25765 PF00465 Iron-containing alcohol dehydrogenase LIT32_25770 PF00171 Aldehyde dehydrogenase family LIT32_25775 PF00815 Histidinol dehydrogenase LIT32_25785 PF00582 Universal stress protein family LIT32_25790 PF00877 NlpC/P60 family LIT32_25790 PF01476 LysM domain LIT32_25795 PF05532 CsbD-like LIT32_25825 PF01965 DJ-1/PfpI family LIT32_25855 PF08708 Primase C terminal 1 (PriCT-1) LIT32_25910 PF00877 NlpC/P60 family LIT32_25920 PF01926 50S ribosome-binding GTPase LIT32_25925 PF18766 SWI2/SNF2 ATPase LIT32_25925 PF11867 Domain of unknown function (DUF3387) LIT32_25925 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LIT32_25975 PF12833 Helix-turn-helix domain LIT32_25975 PF02311 AraC-like ligand binding domain LIT32_25990 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_25995 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_26000 PF02743 Cache domain LIT32_26000 PF00672 HAMP domain LIT32_26000 PF06580 Histidine kinase LIT32_26000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_26005 PF00072 Response regulator receiver domain LIT32_26005 PF12833 Helix-turn-helix domain LIT32_26010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_26010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_26020 PF01261 Xylose isomerase-like TIM barrel LIT32_26025 PF00795 Carbon-nitrogen hydrolase LIT32_26050 PF04002 RadC-like JAB domain LIT32_26060 PF00392 Bacterial regulatory proteins, gntR family LIT32_26060 PF07729 FCD domain LIT32_26065 PF13536 Putative multidrug resistance efflux transporter LIT32_26070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT32_26070 PF00205 Thiamine pyrophosphate enzyme, central domain LIT32_26070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT32_26075 PF00392 Bacterial regulatory proteins, gntR family LIT32_26075 PF07702 UTRA domain LIT32_26080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT32_26080 PF00367 phosphotransferase system, EIIB LIT32_26080 PF02378 Phosphotransferase system, EIIC LIT32_26085 PF00232 Glycosyl hydrolase family 1 LIT32_26090 PF01425 Amidase LIT32_26095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIT32_26095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIT32_26100 PF07977 FabA-like domain LIT32_26110 PF02567 Phenazine biosynthesis-like protein LIT32_26115 PF00248 Aldo/keto reductase family LIT32_26120 PF01810 LysE type translocator LIT32_26125 PF00356 Bacterial regulatory proteins, lacI family LIT32_26130 PF01547 Bacterial extracellular solute-binding protein LIT32_26135 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_26140 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_26145 PF16657 Maltogenic Amylase, C-terminal domain LIT32_26145 PF00128 Alpha amylase, catalytic domain LIT32_26155 PF04041 beta-1,4-mannooligosaccharide phosphorylase LIT32_26165 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_26165 PF16912 Glucose dehydrogenase C-terminus LIT32_26175 PF00480 ROK family LIT32_26180 PF01238 Phosphomannose isomerase type I LIT32_26185 PF02754 Cysteine-rich domain LIT32_26185 PF13183 4Fe-4S dicluster domain LIT32_26190 PF01565 FAD binding domain LIT32_26190 PF02913 FAD linked oxidases, C-terminal domain LIT32_26195 PF05651 Putative sugar diacid recognition LIT32_26195 PF17853 GGDEF-like domain LIT32_26195 PF13556 PucR C-terminal helix-turn-helix domain LIT32_26205 PF13495 Phage integrase, N-terminal SAM-like domain LIT32_26205 PF00589 Phage integrase family LIT32_26215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT32_26215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT32_26220 PF00294 pfkB family carbohydrate kinase LIT32_26225 PF00356 Bacterial regulatory proteins, lacI family LIT32_26225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIT32_26265 PF13614 AAA domain LIT32_26270 PF00245 Alkaline phosphatase LIT32_26275 PF01648 4'-phosphopantetheinyl transferase superfamily LIT32_26280 PF03845 Spore germination protein LIT32_26300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_26300 PF00989 PAS fold LIT32_26300 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIT32_26300 PF17203 Single cache domain 3 LIT32_26305 PF00072 Response regulator receiver domain LIT32_26310 PF03390 2-hydroxycarboxylate transporter family LIT32_26315 PF00390 Malic enzyme, N-terminal domain LIT32_26315 PF03949 Malic enzyme, NAD binding domain LIT32_26325 PF00392 Bacterial regulatory proteins, gntR family LIT32_26325 PF07729 FCD domain LIT32_26330 PF00701 Dihydrodipicolinate synthetase family LIT32_26335 PF00171 Aldehyde dehydrogenase family LIT32_26340 PF03786 D-mannonate dehydratase (UxuA) LIT32_26355 PF01970 Tripartite tricarboxylate transporter TctA family LIT32_26365 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_26380 PF05569 BlaR1 peptidase M56 LIT32_26380 PF00905 Penicillin binding protein transpeptidase domain LIT32_26385 PF03965 Penicillinase repressor LIT32_26390 PF00753 Metallo-beta-lactamase superfamily LIT32_26405 PF01593 Flavin containing amine oxidoreductase LIT32_26415 PF02416 mttA/Hcf106 family LIT32_26420 PF00902 Sec-independent protein translocase protein (TatC) LIT32_26425 PF00293 NUDIX domain LIT32_26430 PF13460 NAD(P)H-binding LIT32_26450 PF00248 Aldo/keto reductase family LIT32_26460 PF05504 Spore germination B3/ GerAC like, C-terminal LIT32_26465 PF03845 Spore germination protein LIT32_26470 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_26495 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_26495 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT32_26500 PF00528 Binding-protein-dependent transport system inner membrane component LIT32_26505 PF00005 ABC transporter LIT32_26505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT32_26520 PF00324 Amino acid permease LIT32_26525 PF13520 Amino acid permease LIT32_26535 PF00583 Acetyltransferase (GNAT) family LIT32_26540 PF02632 BioY family LIT32_26545 PF06874 Firmicute fructose-1,6-bisphosphatase LIT32_26560 PF01569 PAP2 superfamily LIT32_26600 PF00005 ABC transporter LIT32_26605 PF03641 Possible lysine decarboxylase LIT32_26610 PF03819 MazG nucleotide pyrophosphohydrolase domain LIT32_26615 PF06821 Serine hydrolase LIT32_26625 PF00480 ROK family LIT32_26645 PF00239 Resolvase, N terminal domain LIT32_26645 PF02796 Helix-turn-helix domain of resolvase LIT32_26675 PF03061 Thioesterase superfamily LIT32_26695 PF00239 Resolvase, N terminal domain LIT32_26695 PF02796 Helix-turn-helix domain of resolvase LIT32_26775 PF13610 DDE domain LIT32_26785 PF00085 Thioredoxin LIT32_26825 PF00881 Nitroreductase family LIT32_26870 PF02558 Ketopantoate reductase PanE/ApbA LIT32_26870 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIT32_26895 PF00155 Aminotransferase class I and II LIT32_26895 PF00392 Bacterial regulatory proteins, gntR family LIT32_26905 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_26920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT32_26920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT32_26925 PF00364 Biotin-requiring enzyme LIT32_26925 PF02817 e3 binding domain LIT32_26925 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIT32_26930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT32_26930 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_26935 PF13610 DDE domain LIT32_26940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIT32_26940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIT32_26960 PF01641 SelR domain LIT32_26960 PF01625 Peptide methionine sulfoxide reductase LIT32_26965 PF02627 Carboxymuconolactone decarboxylase family LIT32_26990 PF00085 Thioredoxin LIT32_26995 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT32_27010 PF00085 Thioredoxin LIT32_27015 PF13411 MerR HTH family regulatory protein LIT32_27020 PF04224 Protein of unknown function, DUF417 LIT32_27040 PF01625 Peptide methionine sulfoxide reductase LIT32_27060 PF04237 YjbR LIT32_27070 PF02525 Flavodoxin-like fold LIT32_27075 PF07690 Major Facilitator Superfamily LIT32_27105 PF00881 Nitroreductase family LIT32_27110 PF08240 Alcohol dehydrogenase GroES-like domain LIT32_27110 PF00698 Acyl transferase domain LIT32_27110 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT32_27110 PF08990 Erythronolide synthase docking LIT32_27110 PF08659 KR domain LIT32_27110 PF09277 Erythronolide synthase, docking LIT32_27110 PF00550 Phosphopantetheine attachment site LIT32_27110 PF14765 Polyketide synthase dehydratase LIT32_27110 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT32_27110 PF16197 Ketoacyl-synthetase C-terminal extension LIT32_27150 PF02082 Transcriptional regulator LIT32_27155 PF02525 Flavodoxin-like fold LIT32_27170 PF00106 short chain dehydrogenase LIT32_27180 PF03323 Bacillus/Clostridium GerA spore germination protein LIT32_27190 PF03845 Spore germination protein LIT32_27220 PF08680 TATA-box binding LIT32_27240 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LIT32_27245 PF00486 Transcriptional regulatory protein, C terminal LIT32_27245 PF00072 Response regulator receiver domain LIT32_27250 PF00672 HAMP domain LIT32_27250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT32_27250 PF00989 PAS fold LIT32_27250 PF00512 His Kinase A (phospho-acceptor) domain LIT32_27250 PF18698 Histidine kinase sensor domain LIT32_27270 PF01790 Prolipoprotein diacylglyceryl transferase LIT32_27335 PF04224 Protein of unknown function, DUF417 LIT32_27395 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LIT32_27400 PF17853 GGDEF-like domain LIT32_27400 PF13556 PucR C-terminal helix-turn-helix domain LIT32_27400 PF07905 Purine catabolism regulatory protein-like family LIT32_27405 PF01546 Peptidase family M20/M25/M40 LIT32_27410 PF00266 Aminotransferase class-V LIT32_27415 PF00860 Permease family LIT32_27420 PF01425 Amidase LIT32_27425 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT32_27430 PF01979 Amidohydrolase family