locus-tag	class	description
LIT32_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LIT32_00010	COG0592	DNA-directed DNA polymerase activity
LIT32_00015	COG2501	S4 domain
LIT32_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LIT32_00030	COG0187	DNA topoisomerase II activity
LIT32_00045	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIT32_00050	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
LIT32_00085	COG0516	GMP reductase activity
LIT32_00085	COG0517	IMP dehydrogenase activity
LIT32_00090	COG1686	Belongs to the peptidase S11 family
LIT32_00100	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LIT32_00105	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LIT32_00115	COG1428	Deoxynucleoside kinase
LIT32_00120	COG1428	Deoxynucleoside kinase
LIT32_00125	COG3185	4-Hydroxyphenylpyruvate dioxygenase
LIT32_00130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LIT32_00135	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIT32_00145	COG1388	LysM domain
LIT32_00145	COG3858	chitin binding
LIT32_00150	COG1335	isochorismatase
LIT32_00155	COG0590	tRNA wobble adenosine to inosine editing
LIT32_00165	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LIT32_00170	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LIT32_00175	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LIT32_00220	COG1982	Orn Lys Arg decarboxylase major
LIT32_00225	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LIT32_00230	COG3870	Protein conserved in bacteria
LIT32_00235	COG1728	Protein conserved in bacteria
LIT32_00240	COG0470	DNA polymerase III
LIT32_00245	COG1774	PSP1 C-terminal conserved region
LIT32_00250	COG4467	Involved in initiation control of chromosome replication
LIT32_00255	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LIT32_00260	COG2827	Endonuclease containing a URI domain
LIT32_00265	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LIT32_00270	COG2002	toxin-antitoxin pair type II binding
LIT32_00280	COG0084	hydrolase, TatD family'
LIT32_00285	COG3583	domain protein
LIT32_00285	COG3584	3D domain protein
LIT32_00290	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LIT32_00295	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LIT32_00305	COG4466	Protein conserved in bacteria
LIT32_00315	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LIT32_00320	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LIT32_00325	COG0251	oxidation-reduction process
LIT32_00335	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LIT32_00345	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LIT32_00350	COG0193	aminoacyl-tRNA hydrolase activity
LIT32_00360	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LIT32_00365	COG2002	toxin-antitoxin pair type II binding
LIT32_00370	COG2244	polysaccharide biosynthetic process
LIT32_00375	COG3956	TIGRFAM MazG family protein
LIT32_00380	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LIT32_00395	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LIT32_00400	COG1098	S1 RNA binding domain
LIT32_00415	COG2208	phosphoserine phosphatase activity
LIT32_00420	COG2304	oxidoreductase activity
LIT32_00425	COG0515	serine threonine protein kinase
LIT32_00430	COG0037	tRNA processing
LIT32_00435	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LIT32_00440	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LIT32_00445	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LIT32_00450	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LIT32_00455	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LIT32_00460	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIT32_00465	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LIT32_00470	COG0512	Glutamine amidotransferase of anthranilate synthase
LIT32_00475	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIT32_00480	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LIT32_00485	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LIT32_00490	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LIT32_00495	COG1396	sequence-specific DNA binding
LIT32_00500	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIT32_00590	COG3880	PFAM UvrB UvrC protein
LIT32_00595	COG3869	Catalyzes the specific phosphorylation of arginine residues in
LIT32_00600	COG0542	response to heat
LIT32_00605	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LIT32_00610	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
LIT32_00615	COG4956	integral membrane protein (PIN domain superfamily)
LIT32_00620	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LIT32_00630	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LIT32_00635	COG1045	serine acetyltransferase
LIT32_00640	COG0215	cysteine-tRNA ligase activity
LIT32_00645	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LIT32_00650	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIT32_00655	COG3688	RNA-binding protein containing a PIN domain
LIT32_00665	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LIT32_00670	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LIT32_00675	COG0250	Participates in transcription elongation, termination and antitermination
LIT32_00680	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LIT32_00685	COG0081	regulation of translation
LIT32_00690	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LIT32_00695	COG0222	ribosome binding
LIT32_00700	COG2813	Specifically methylates the guanine in position
LIT32_00705	COG0085	RNA polymerase activity
LIT32_00710	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LIT32_00715	COG1358	cellular component organization or biogenesis
LIT32_00725	COG0049	tRNA binding
LIT32_00735	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LIT32_00740	COG0051	transcription antitermination factor activity, RNA binding
LIT32_00745	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LIT32_00750	COG0088	Forms part of the polypeptide exit tunnel
LIT32_00755	COG0089	rRNA binding
LIT32_00760	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LIT32_00765	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LIT32_00770	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LIT32_00775	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LIT32_00780	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LIT32_00785	COG0255	Belongs to the universal ribosomal protein uL29 family
LIT32_00790	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LIT32_00795	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LIT32_00810	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LIT32_00815	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LIT32_00825	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LIT32_00830	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LIT32_00835	COG1841	ribosomal large subunit assembly
LIT32_00840	COG0200	Binds to the 23S rRNA
LIT32_00845	COG0201	protein transport
LIT32_00850	COG0563	adenylate kinase activity
LIT32_00855	COG0024	Methionine aminopeptidase
LIT32_00860	COG2163	COG2163 Ribosomal protein L14E L6E L27E
LIT32_00865	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LIT32_00870	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LIT32_00875	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LIT32_00880	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LIT32_00885	COG0202	RNA polymerase activity
LIT32_00890	COG0203	ribosomal protein L17
LIT32_00895	COG1122	ATPase activity
LIT32_00900	COG1122	ATPase activity
LIT32_00905	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIT32_00915	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LIT32_00920	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LIT32_00930	COG3103	Sh3 type 3 domain protein
LIT32_00930	COG1388	LysM domain
LIT32_00930	COG0791	NLP P60 protein
LIT32_00945	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT32_00950	COG0489	protein tyrosine kinase activity
LIT32_00960	COG2194	sulfuric ester hydrolase activity
LIT32_00965	COG0726	polysaccharide deacetylase
LIT32_01045	COG1595	DNA-templated transcription, initiation
LIT32_01050	COG5662	AntiSigma factor
LIT32_01055	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LIT32_01060	COG4856	YbbR-like protein
LIT32_01065	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LIT32_01070	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LIT32_01080	COG0596	Alpha beta hydrolase
LIT32_01090	COG2340	Cysteine-rich secretory protein family
LIT32_01095	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LIT32_01100	COG0628	permease
LIT32_01105	COG2113	Glycine betaine
LIT32_01115	COG0517	IMP dehydrogenase activity
LIT32_01115	COG4175	Glycine betaine
LIT32_01120	COG1764	response to oxidative stress
LIT32_01140	COG1695	Transcriptional regulator
LIT32_01145	COG0346	lactoylglutathione lyase activity
LIT32_01150	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LIT32_01155	COG1214	PFAM Peptidase M22, glycoprotease
LIT32_01155	COG0456	acetyltransferase
LIT32_01165	COG3711	transcriptional antiterminator
LIT32_01170	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_01175	COG0246	Mannitol dehydrogenase
LIT32_01190	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LIT32_01195	COG0346	lactoylglutathione lyase activity
LIT32_01200	COG1132	(ABC) transporter
LIT32_01205	COG3403	YqcI/YcgG family
LIT32_01215	COG2226	methyltransferase
LIT32_01225	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_01230	COG1131	(ABC) transporter
LIT32_01235	COG0842	Transport permease protein
LIT32_01235	COG1511	domain protein
LIT32_01250	COG1309	transcriptional regulator
LIT32_01270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_01275	COG1131	(ABC) transporter
LIT32_01285	COG0628	permease
LIT32_01290	COG0586	Pfam SNARE associated Golgi protein
LIT32_01305	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_01310	COG1181	Belongs to the D-alanine--D-alanine ligase family
LIT32_01315	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LIT32_01335	COG4294	response to UV
LIT32_01340	COG3402	PFAM membrane-flanked domain
LIT32_01345	COG3428	Bacterial PH domain
LIT32_01350	COG0705	Rhomboid family
LIT32_01355	COG0736	holo-[acyl-carrier-protein] synthase activity
LIT32_01360	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LIT32_01370	COG0864	Transcriptional regulator
LIT32_01375	COG2337	Toxic component of a toxin-antitoxin (TA) module
LIT32_01380	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_01385	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_01390	COG2172	sigma factor antagonist activity
LIT32_01395	COG2208	phosphoserine phosphatase activity
LIT32_01400	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_01405	COG2172	sigma factor antagonist activity
LIT32_01410	COG1191	sigma factor activity
LIT32_01415	COG2208	phosphoserine phosphatase activity
LIT32_01420	COG2183	response to ionizing radiation
LIT32_01430	COG3091	SprT-like family
LIT32_01520	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LIT32_01525	COG0802	atpase or kinase
LIT32_01530	COG1214	PFAM Peptidase M22, glycoprotease
LIT32_01535	COG0456	acetyltransferase
LIT32_01545	COG0488	(ABC) transporter
LIT32_01550	COG0315	cyclic pyranopterin monophosphate synthase activity
LIT32_01555	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LIT32_01560	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_01565	COG0805	protein transport
LIT32_01575	COG1266	CAAX protease self-immunity
LIT32_01580	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LIT32_01585	COG0459	protein refolding
LIT32_01605	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_01605	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_01605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_01610	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_01610	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_01615	COG0383	alpha-mannosidase activity
LIT32_01625	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_01625	COG3711	transcriptional antiterminator
LIT32_01650	COG0492	ferredoxin-NADP+ reductase activity
LIT32_01660	COG1621	beta-fructofuranosidase activity
LIT32_01665	COG1621	beta-fructofuranosidase activity
LIT32_01685	COG4753	response regulator
LIT32_01685	COG2207	Transcriptional regulator
LIT32_01690	COG2972	Histidine kinase
LIT32_01695	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT32_01700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT32_01705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT32_01710	COG1120	ATPase activity
LIT32_01715	COG0492	ferredoxin-NADP+ reductase activity
LIT32_01725	COG0714	Associated with various cellular activities
LIT32_01730	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
LIT32_01735	COG1305	Transglutaminase-like
LIT32_01740	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LIT32_01740	COG0519	Catalyzes the synthesis of GMP from XMP
LIT32_01745	COG2252	PERMEase
LIT32_01805	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LIT32_01810	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LIT32_01815	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LIT32_01820	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LIT32_01825	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LIT32_01830	COG0047	phosphoribosylformylglycinamidine synthase activity
LIT32_01835	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LIT32_01840	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LIT32_01845	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LIT32_01850	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LIT32_01855	COG0138	bifunctional purine biosynthesis protein purh
LIT32_01860	COG0151	Belongs to the GarS family
LIT32_01870	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LIT32_01875	COG1470	cell adhesion involved in biofilm formation
LIT32_01880	COG4496	protein, YerC YecD
LIT32_01895	COG0210	DNA helicase
LIT32_01905	COG4851	CamS sex pheromone cAM373 precursor
LIT32_01910	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_01915	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIT32_01920	COG0071	Belongs to the small heat shock protein (HSP20) family
LIT32_01925	COG1653	transport
LIT32_01950	COG1874	Beta-galactosidase
LIT32_01955	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LIT32_01960	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LIT32_01965	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
LIT32_01975	COG1609	Transcriptional regulator
LIT32_01985	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_01995	COG0154	amidase activity
LIT32_02005	COG1597	lipid kinase activity
LIT32_02010	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIT32_02015	COG3546	catalase activity
LIT32_02025	COG0662	Cupin 2, conserved barrel domain protein
LIT32_02040	COG1937	Protein conserved in bacteria
LIT32_02050	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT32_02055	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT32_02055	COG0425	Belongs to the sulfur carrier protein TusA family
LIT32_02060	COG2210	Belongs to the sulfur carrier protein TusA family
LIT32_02065	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT32_02065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT32_02070	COG0425	Belongs to the sulfur carrier protein TusA family
LIT32_02075	COG2210	Belongs to the sulfur carrier protein TusA family
LIT32_02080	COG0730	response to heat
LIT32_02085	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIT32_02115	COG3973	AAA domain
LIT32_02130	COG0477	Major facilitator Superfamily
LIT32_02135	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_02140	COG3540	Alkaline phosphatase
LIT32_02145	COG1115	amino acid carrier protein
LIT32_02155	COG4191	Histidine kinase
LIT32_02160	COG0784	Response regulator, receiver
LIT32_02165	COG1396	sequence-specific DNA binding
LIT32_02170	COG0252	asparaginase activity
LIT32_02175	COG1027	Aspartate ammonia-lyase
LIT32_02180	COG1757	Na H antiporter
LIT32_02195	COG1733	regulation of RNA biosynthetic process
LIT32_02200	COG0778	Nitroreductase
LIT32_02205	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_02210	COG2207	Transcriptional regulator
LIT32_02225	COG1607	acyl-coa hydrolase
LIT32_02230	COG0583	DNA-binding transcription factor activity
LIT32_02235	COG4807	Protein conserved in bacteria
LIT32_02245	COG2234	aminopeptidase activity
LIT32_02265	COG1414	Transcriptional regulator
LIT32_02270	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT32_02280	COG4948	Mandelate Racemase Muconate Lactonizing
LIT32_02285	COG2271	Major facilitator Superfamily
LIT32_02300	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_02305	COG1131	(ABC) transporter
LIT32_02315	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_02320	COG0765	amino acid transport
LIT32_02325	COG1126	abc transporter atp-binding protein
LIT32_02330	COG4122	O-methyltransferase activity
LIT32_02350	COG3964	amidohydrolase
LIT32_02370	COG2188	Transcriptional regulator
LIT32_02405	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LIT32_02415	COG1335	isochorismatase
LIT32_02420	COG5646	InterPro IPR014922
LIT32_02430	COG0385	Bile acid
LIT32_02435	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_02440	COG1279	arginine transmembrane transporter activity
LIT32_02445	COG3290	protein histidine kinase activity
LIT32_02450	COG3279	Response regulator of the LytR AlgR family
LIT32_02455	COG4555	ABC transporter
LIT32_02460	COG1668	transmembrane transport
LIT32_02465	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT32_02470	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LIT32_02475	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LIT32_02600	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
LIT32_02605	COG3853	Toxic anion resistance protein (TelA)
LIT32_02615	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LIT32_02630	COG0166	Belongs to the GPI family
LIT32_02645	COG5444	nuclease activity
LIT32_02655	COG5444	nuclease activity
LIT32_02695	COG0494	nUDIX hydrolase
LIT32_02700	COG1335	isochorismatase
LIT32_02705	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LIT32_02715	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LIT32_02720	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LIT32_02740	COG3290	protein histidine kinase activity
LIT32_02745	COG4565	transcriptional regulatory protein
LIT32_02775	COG2966	Psort location CytoplasmicMembrane, score
LIT32_02780	COG3610	response to peptide
LIT32_02790	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_02795	COG1115	amino acid carrier protein
LIT32_02805	COG1132	(ABC) transporter
LIT32_02810	COG1132	(ABC) transporter
LIT32_02815	COG0693	protein deglycase activity
LIT32_02835	COG0411	ABC transporter
LIT32_02845	COG0477	Major facilitator Superfamily
LIT32_02850	COG3162	membrane
LIT32_02855	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIT32_02870	COG1966	Carbon starvation protein
LIT32_02890	COG2356	endonuclease I
LIT32_02905	COG0488	(ABC) transporter
LIT32_02910	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_02915	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIT32_02940	COG4585	Histidine kinase
LIT32_02945	COG2197	response regulator
LIT32_02950	COG0840	transmembrane signaling receptor activity
LIT32_02955	COG2169	Transcriptional regulator
LIT32_02975	COG3275	phosphorelay sensor kinase activity
LIT32_02980	COG4608	Belongs to the ABC transporter superfamily
LIT32_02985	COG0444	Belongs to the ABC transporter superfamily
LIT32_02990	COG0601	transmembrane transport
LIT32_02995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_03000	COG0747	negative chemotaxis
LIT32_03005	COG0402	S-adenosylhomocysteine deaminase activity
LIT32_03010	COG0402	S-adenosylhomocysteine deaminase activity
LIT32_03015	COG0697	spore germination
LIT32_03030	COG3842	ATPase activity
LIT32_03040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LIT32_03045	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LIT32_03055	COG1349	DNA-binding transcription factor activity
LIT32_03075	COG1113	amino acid transport
LIT32_03085	COG1295	ribonuclease BN
LIT32_03095	COG1263	PTS System
LIT32_03095	COG2190	(PTS) system
LIT32_03095	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_03100	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LIT32_03105	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_03120	COG3829	transcription factor binding
LIT32_03125	COG1509	lysine 2,3-aminomutase activity
LIT32_03140	COG1141	Ferredoxin
LIT32_03145	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIT32_03150	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LIT32_03155	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LIT32_03160	COG0183	Belongs to the thiolase family
LIT32_03165	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT32_03170	COG0833	amino acid
LIT32_03180	COG1254	Belongs to the acylphosphatase family
LIT32_03190	COG2258	MOSC domain
LIT32_03215	COG0415	Belongs to the DNA photolyase family
LIT32_03225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_03225	COG1263	PTS System
LIT32_03230	COG0366	Alpha amylase catalytic
LIT32_03235	COG2188	Transcriptional regulator
LIT32_03240	COG1073	alpha beta
LIT32_03245	COG0737	Belongs to the 5'-nucleotidase family
LIT32_03250	COG0693	protein deglycase activity
LIT32_03260	COG4840	Belongs to the UPF0435 family
LIT32_03265	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LIT32_03275	COG1295	ribonuclease BN
LIT32_03290	COG0477	Major facilitator Superfamily
LIT32_03300	COG3871	stress protein (general stress protein 26)
LIT32_03305	COG0387	Pfam Sodium calcium exchanger
LIT32_03310	COG2364	Membrane
LIT32_03320	COG0535	radical SAM domain protein
LIT32_03340	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LIT32_03345	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIT32_03355	COG2214	Heat shock protein DnaJ domain protein
LIT32_03360	COG0443	Heat shock 70 kDa protein
LIT32_03365	COG0513	Belongs to the DEAD box helicase family
LIT32_03370	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LIT32_03375	COG0243	molybdopterin cofactor binding
LIT32_03380	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LIT32_03385	COG2146	nitrite reductase [NAD(P)H] activity
LIT32_03395	COG0697	spore germination
LIT32_03400	COG2223	nitrite transmembrane transporter activity
LIT32_03420	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LIT32_03425	COG1090	epimerase
LIT32_03430	COG2137	regulation of response to DNA damage stimulus
LIT32_03435	COG4221	oxidoreductase activity
LIT32_03460	COG1988	membrane-bound metal-dependent
LIT32_03465	COG1194	a g-specific adenine glycosylase
LIT32_03475	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_03490	COG3557	Belongs to the UPF0374 family
LIT32_03495	COG1132	(ABC) transporter
LIT32_03500	COG0444	Belongs to the ABC transporter superfamily
LIT32_03505	COG4608	Belongs to the ABC transporter superfamily
LIT32_03510	COG0747	negative chemotaxis
LIT32_03515	COG0601	transmembrane transport
LIT32_03520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_03525	COG4129	membrane
LIT32_03530	COG0069	glutamate synthase activity
LIT32_03530	COG0070	glutamate synthase
LIT32_03530	COG0067	glutamate synthase
LIT32_03535	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LIT32_03540	COG0725	ABC transporter, periplasmic molybdate-binding protein
LIT32_03545	COG4149	molybdate abc transporter
LIT32_03555	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LIT32_03560	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIT32_03565	COG0735	belongs to the Fur family
LIT32_03730	COG2972	Histidine kinase
LIT32_03735	COG2207	Transcriptional regulator
LIT32_03735	COG4753	response regulator
LIT32_03745	COG3382	B3 4 domain protein
LIT32_03760	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LIT32_03765	COG2766	serine protein kinase
LIT32_03775	COG2718	Belongs to the UPF0229 family
LIT32_03780	COG0501	Belongs to the peptidase M48B family
LIT32_03790	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIT32_03795	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIT32_03800	COG1486	melibiose metabolic process
LIT32_03815	COG1105	Belongs to the carbohydrate kinase PfkB family
LIT32_03820	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_03820	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_03820	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_03835	COG0561	phosphatase activity
LIT32_03845	COG3933	PFAM sigma-54 factor interaction domain-containing protein
LIT32_03845	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LIT32_03850	COG2205	protein histidine kinase activity
LIT32_03855	COG0745	RESPONSE REGULATOR receiver
LIT32_03860	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
LIT32_03880	COG1653	transport
LIT32_03885	COG1175	transmembrane transport
LIT32_03890	COG0395	ABC-type sugar transport system, permease component
LIT32_03905	COG3290	protein histidine kinase activity
LIT32_03910	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LIT32_03915	COG1301	dicarboxylic acid transport
LIT32_03920	COG1392	Phosphate transport regulator
LIT32_03925	COG0306	phosphate transporter
LIT32_03930	COG0778	Nitroreductase
LIT32_03940	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIT32_03955	COG0583	DNA-binding transcription factor activity
LIT32_03965	COG2259	Doxx family
LIT32_03985	COG4989	oxidoreductase activity
LIT32_03990	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LIT32_03995	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_04005	COG3540	Alkaline phosphatase
LIT32_04010	COG2217	Heavy metal translocating P-type atpase
LIT32_04015	COG0656	L-ascorbic acid biosynthetic process
LIT32_04020	COG3764	Sortase (surface protein transpeptidase)
LIT32_04025	COG0456	acetyltransferase
LIT32_04030	COG0564	pseudouridine synthase activity
LIT32_04050	COG0517	IMP dehydrogenase activity
LIT32_04055	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LIT32_04060	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LIT32_04060	COG3153	acetyltransferase
LIT32_04065	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LIT32_04070	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LIT32_04080	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LIT32_04085	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LIT32_04090	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_04095	COG1609	Transcriptional regulator
LIT32_04100	COG0366	Alpha amylase catalytic
LIT32_04105	COG1653	transport
LIT32_04110	COG1175	transmembrane transport
LIT32_04115	COG0395	ABC-type sugar transport system, permease component
LIT32_04120	COG1063	alcohol dehydrogenase
LIT32_04125	COG1082	Xylose isomerase domain protein TIM barrel
LIT32_04130	COG0673	inositol 2-dehydrogenase activity
LIT32_04135	COG1554	hydrolase, family 65, central catalytic
LIT32_04140	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LIT32_04145	COG2203	Gaf domain
LIT32_04145	COG4585	Histidine kinase
LIT32_04150	COG2197	response regulator
LIT32_04155	COG0431	NADPH-dependent FMN reductase
LIT32_04165	COG2323	membrane
LIT32_04180	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT32_04185	COG4209	transmembrane transport
LIT32_04190	COG0395	ABC-type sugar transport system, permease component
LIT32_04205	COG1609	Transcriptional regulator
LIT32_04210	COG1397	ADP-ribosylglycohydrolase
LIT32_04215	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LIT32_04225	COG1959	2 iron, 2 sulfur cluster binding
LIT32_04235	COG2814	Major facilitator Superfamily
LIT32_04240	COG2719	SpoVR family
LIT32_04250	COG0477	Major facilitator Superfamily
LIT32_04255	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_04265	COG0492	ferredoxin-NADP+ reductase activity
LIT32_04280	COG0640	Transcriptional regulator
LIT32_04285	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LIT32_04300	COG1363	Peptidase, m42
LIT32_04310	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LIT32_04315	COG5002	protein histidine kinase activity
LIT32_04325	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIT32_04330	COG2271	Major facilitator Superfamily
LIT32_04335	COG0506	proline dehydrogenase activity
LIT32_04340	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_04345	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIT32_04350	COG2508	Transcriptional regulator
LIT32_04355	COG1742	UPF0060 membrane protein
LIT32_04360	COG3339	Conserved Protein
LIT32_04365	COG2738	Putative neutral zinc metallopeptidase
LIT32_04370	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIT32_04380	COG3829	transcription factor binding
LIT32_04385	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_04390	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LIT32_04395	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LIT32_04400	COG0671	phosphoesterase, PA-phosphatase related
LIT32_04405	COG1295	ribonuclease BN
LIT32_04410	COG1329	Transcriptional regulator
LIT32_04415	COG0640	Transcriptional regulator
LIT32_04420	COG2233	PERMEase
LIT32_04425	COG0583	DNA-binding transcription factor activity
LIT32_04430	COG2188	Transcriptional regulator
LIT32_04435	COG1840	ABC-type Fe3 transport system, periplasmic component
LIT32_04440	COG3842	ATPase activity
LIT32_04445	COG1176	ABC-type spermidine putrescine transport system, permease component I
LIT32_04450	COG1177	transmembrane transport
LIT32_04485	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LIT32_04505	COG2318	DinB family
LIT32_04520	COG0628	permease
LIT32_04560	COG1764	response to oxidative stress
LIT32_04575	COG0668	transmembrane transport
LIT32_04580	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT32_04585	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_04600	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIT32_04605	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIT32_04615	COG1757	Na H antiporter
LIT32_04635	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
LIT32_04655	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LIT32_04660	COG0726	polysaccharide deacetylase
LIT32_04665	COG1408	metallophosphoesterase
LIT32_04675	COG1073	alpha beta
LIT32_04690	COG2085	NADP oxidoreductase coenzyme F420-dependent
LIT32_04695	COG1733	regulation of RNA biosynthetic process
LIT32_04705	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_04710	COG0384	phenazine biosynthesis protein PhzF
LIT32_04720	COG1660	Displays ATPase and GTPase activities
LIT32_04725	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_04735	COG0589	response to stress
LIT32_04740	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT32_04755	COG0393	Putative heavy-metal-binding
LIT32_04760	COG1132	(ABC) transporter
LIT32_04765	COG1132	(ABC) transporter
LIT32_04770	COG0702	epimerase
LIT32_04775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_04780	COG0765	amino acid transport
LIT32_04785	COG1126	abc transporter atp-binding protein
LIT32_04805	COG3842	ATPase activity
LIT32_04810	COG2508	Transcriptional regulator
LIT32_04830	COG0189	ligase activity
LIT32_04835	COG0189	ligase activity
LIT32_04840	COG3679	Belongs to the UPF0342 family
LIT32_04845	COG0561	phosphatase activity
LIT32_04860	COG0561	phosphatase activity
LIT32_04865	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LIT32_04875	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LIT32_04925	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LIT32_04925	COG1605	Chorismate mutase
LIT32_04960	COG1960	acyl-CoA dehydrogenase activity
LIT32_04965	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT32_04970	COG0183	Belongs to the thiolase family
LIT32_04975	COG1024	Enoyl-CoA hydratase
LIT32_04985	COG4152	abc transporter atp-binding protein
LIT32_04990	COG1668	transmembrane transport
LIT32_04995	COG0420	3'-5' exonuclease activity
LIT32_05000	COG4717	serine-type aminopeptidase activity
LIT32_05010	COG3481	metal-dependent phosphohydrolase, HD sub domain
LIT32_05020	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LIT32_05050	COG1846	Transcriptional regulator
LIT32_05055	COG4980	gas vesicle protein
LIT32_05070	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LIT32_05075	COG0537	adenosine 5'-monophosphoramidase activity
LIT32_05085	COG1131	(ABC) transporter
LIT32_05090	COG4473	ABC transporter
LIT32_05100	COG1473	amidohydrolase
LIT32_05105	COG0671	phosphoesterase, PA-phosphatase related
LIT32_05110	COG3069	C4-dicarboxylate transmembrane transporter activity
LIT32_05115	COG2329	Antibiotic biosynthesis monooxygenase
LIT32_05120	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT32_05125	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LIT32_05130	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LIT32_05135	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LIT32_05140	COG1309	transcriptional regulator
LIT32_05145	COG1511	domain protein
LIT32_05150	COG1609	Transcriptional regulator
LIT32_05160	COG0753	catalase activity
LIT32_05160	COG0693	protein deglycase activity
LIT32_05170	COG1234	tRNA 3'-trailer cleavage
LIT32_05175	COG0095	Lipoate-protein ligase
LIT32_05180	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_05185	COG1024	Enoyl-CoA hydratase
LIT32_05190	COG1396	sequence-specific DNA binding
LIT32_05195	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
LIT32_05205	COG0501	Belongs to the peptidase M48B family
LIT32_05210	COG2224	Isocitrate lyase
LIT32_05220	COG0383	alpha-mannosidase activity
LIT32_05235	COG5578	integral membrane protein
LIT32_05245	COG2972	Histidine kinase
LIT32_05250	COG2207	Transcriptional regulator
LIT32_05250	COG4753	response regulator
LIT32_05255	COG4209	transmembrane transport
LIT32_05260	COG0395	ABC-type sugar transport system, permease component
LIT32_05265	COG1653	transport
LIT32_05270	COG2723	6-phospho-beta-galactosidase activity
LIT32_05275	COG1940	carbohydrate kinase activity
LIT32_05285	COG0673	inositol 2-dehydrogenase activity
LIT32_05290	COG1129	ABC transporter
LIT32_05295	COG1172	Belongs to the binding-protein-dependent transport system permease family
LIT32_05300	COG1879	ABC-type sugar transport system periplasmic component
LIT32_05305	COG1609	Transcriptional regulator
LIT32_05310	COG0673	inositol 2-dehydrogenase activity
LIT32_05325	COG3962	Belongs to the TPP enzyme family
LIT32_05330	COG1082	Xylose isomerase domain protein TIM barrel
LIT32_05335	COG3718	enzyme involved in inositol metabolism
LIT32_05340	COG2814	Major facilitator Superfamily
LIT32_05345	COG4903	ComK protein
LIT32_05355	COG0398	Pfam SNARE associated Golgi protein
LIT32_05360	COG0681	Belongs to the peptidase S26 family
LIT32_05370	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
LIT32_05375	COG1074	ATP-dependent DNA helicase activity
LIT32_05380	COG0420	3'-5' exonuclease activity
LIT32_05385	COG0419	ATPase involved in DNA repair
LIT32_05390	COG1403	HNH endonuclease
LIT32_05425	COG0395	ABC-type sugar transport system, permease component
LIT32_05435	COG1653	transport
LIT32_05445	COG3459	Glycosyltransferase 36 associated
LIT32_05450	COG1609	Transcriptional regulator
LIT32_05465	COG2207	Transcriptional regulator
LIT32_05475	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LIT32_05490	COG0531	amino acid
LIT32_05500	COG1309	transcriptional regulator
LIT32_05535	COG2311	Membrane
LIT32_05545	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIT32_05550	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LIT32_05565	COG0367	asparagine synthase
LIT32_05570	COG1464	Belongs to the NlpA lipoprotein family
LIT32_05575	COG0004	ammonium transporteR
LIT32_05580	COG0534	Mate efflux family protein
LIT32_05585	COG1917	Cupin 2, conserved barrel domain protein
LIT32_05585	COG2207	Transcriptional regulator
LIT32_05595	COG1113	amino acid transport
LIT32_05605	COG2182	Extracellular solute-binding protein
LIT32_05610	COG1175	transmembrane transport
LIT32_05615	COG3833	ABC-type maltose transport systems, permease component
LIT32_05620	COG0366	Alpha amylase catalytic
LIT32_05620	COG1874	Beta-galactosidase
LIT32_05650	COG1227	inorganic diphosphatase activity
LIT32_05665	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_05670	COG0646	methionine synthase
LIT32_05670	COG1410	methionine synthase
LIT32_05675	COG0646	methionine synthase
LIT32_05675	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LIT32_05680	COG1666	GTP binding
LIT32_05685	COG2996	Protein conserved in bacteria
LIT32_05690	COG1744	ABC transporter substrate-binding protein PnrA-like
LIT32_05695	COG0840	transmembrane signaling receptor activity
LIT32_05705	COG1307	EDD domain protein, DegV family
LIT32_05710	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_05730	COG0561	phosphatase activity
LIT32_05735	COG1073	alpha beta
LIT32_05740	COG2151	metal-sulfur cluster biosynthetic enzyme
LIT32_05745	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LIT32_05750	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LIT32_05755	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LIT32_05760	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LIT32_05765	COG0505	Belongs to the CarA family
LIT32_05770	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LIT32_05775	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LIT32_05790	COG2267	carboxylic ester hydrolase activity
LIT32_05800	COG1744	ABC transporter substrate-binding protein PnrA-like
LIT32_05820	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIT32_05825	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LIT32_05830	COG5504	Zn-dependent protease
LIT32_05835	COG0444	Belongs to the ABC transporter superfamily
LIT32_05840	COG4608	Belongs to the ABC transporter superfamily
LIT32_05850	COG0601	transmembrane transport
LIT32_05855	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_05870	COG0180	Tryptophanyl-tRNA synthetase
LIT32_05885	COG0601	transmembrane transport
LIT32_05890	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_05895	COG0444	Belongs to the ABC transporter superfamily
LIT32_05900	COG4608	Belongs to the ABC transporter superfamily
LIT32_05915	COG0456	acetyltransferase
LIT32_05920	COG1393	Belongs to the ArsC family
LIT32_05925	COG0861	Integral membrane protein TerC family
LIT32_05930	COG4862	establishment of competence for transformation
LIT32_05935	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIT32_05940	COG4469	Competence protein
LIT32_05950	COG1164	Oligoendopeptidase f
LIT32_05960	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LIT32_05965	COG2346	COG2346, Truncated hemoglobins
LIT32_05970	COG0741	lytic transglycosylase activity
LIT32_05975	COG4116	CYTH
LIT32_05985	COG2357	RelA SpoT domain protein
LIT32_05990	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LIT32_05995	COG0564	pseudouridine synthase activity
LIT32_06000	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LIT32_06005	COG0772	Belongs to the SEDS family
LIT32_06010	COG2239	Acts as a magnesium transporter
LIT32_06015	COG0475	glutathione-regulated potassium exporter activity
LIT32_06015	COG0569	domain protein
LIT32_06020	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LIT32_06025	COG0352	thiamine-phosphate diphosphorylase activity
LIT32_06040	COG2022	thiamine diphosphate biosynthetic process
LIT32_06045	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LIT32_06050	COG2733	membrane
LIT32_06055	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
LIT32_06075	COG3546	catalase activity
LIT32_06090	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIT32_06095	COG0438	transferase activity, transferring glycosyl groups
LIT32_06100	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIT32_06110	COG0438	transferase activity, transferring glycosyl groups
LIT32_06115	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LIT32_06120	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LIT32_06125	COG0438	transferase activity, transferring glycosyl groups
LIT32_06180	COG0210	DNA helicase
LIT32_06195	COG2323	membrane
LIT32_06200	COG2153	protein acetylation
LIT32_06205	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LIT32_06210	COG2382	esterase
LIT32_06225	COG0626	cystathionine gamma-synthase activity
LIT32_06230	COG0626	cystathionine gamma-synthase activity
LIT32_06270	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LIT32_06275	COG4977	sequence-specific DNA binding
LIT32_06305	COG0588	phosphoglycerate mutase activity
LIT32_06310	COG3708	Transcriptional regulator
LIT32_06310	COG2207	Transcriptional regulator
LIT32_06320	COG3708	Transcriptional regulator
LIT32_06320	COG2207	Transcriptional regulator
LIT32_06325	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_06330	COG0586	Pfam SNARE associated Golgi protein
LIT32_06335	COG0772	Belongs to the SEDS family
LIT32_06340	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_06355	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LIT32_06360	COG0772	Belongs to the SEDS family
LIT32_06365	COG0697	spore germination
LIT32_06385	COG3739	integral membrane protein
LIT32_06390	COG2514	catechol 2,3-dioxygenase activity
LIT32_06400	COG2318	DinB family
LIT32_06405	COG3239	Fatty acid desaturase
LIT32_06410	COG4585	Histidine kinase
LIT32_06415	COG2197	response regulator
LIT32_06435	COG1051	belongs to the nudix hydrolase family
LIT32_06445	COG2271	Major facilitator Superfamily
LIT32_06460	COG2211	Major facilitator Superfamily
LIT32_06475	COG1131	(ABC) transporter
LIT32_06495	COG1607	acyl-coa hydrolase
LIT32_06510	COG0531	amino acid
LIT32_06515	COG1846	Transcriptional regulator
LIT32_06520	COG1033	growth of symbiont in host cell
LIT32_06520	COG2409	Drug exporters of the RND superfamily
LIT32_06535	COG1720	tRNA m6t6A37 methyltransferase activity
LIT32_06540	COG0579	oxidoreductase
LIT32_06555	COG4632	Exopolysaccharide biosynthesis protein
LIT32_06555	COG5434	Belongs to the glycosyl hydrolase 28 family
LIT32_06570	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_06575	COG1349	DNA-binding transcription factor activity
LIT32_06580	COG1879	ABC-type sugar transport system periplasmic component
LIT32_06585	COG1129	ABC transporter
LIT32_06590	COG1172	Belongs to the binding-protein-dependent transport system permease family
LIT32_06595	COG1621	beta-fructofuranosidase activity
LIT32_06600	COG0281	malic enzyme
LIT32_06605	COG1027	Aspartate ammonia-lyase
LIT32_06615	COG4191	Histidine kinase
LIT32_06620	COG0784	Response regulator, receiver
LIT32_06625	COG0697	spore germination
LIT32_06630	COG0531	amino acid
LIT32_06655	COG4842	Belongs to the WXG100 family
LIT32_06670	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LIT32_06675	COG0745	RESPONSE REGULATOR receiver
LIT32_06690	COG4682	membrane
LIT32_06715	COG0861	Integral membrane protein TerC family
LIT32_06750	COG1126	abc transporter atp-binding protein
LIT32_06755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_06760	COG0765	amino acid transport
LIT32_06765	COG0765	amino acid transport
LIT32_06800	COG5577	PFAM Coat F domain
LIT32_06820	COG1063	alcohol dehydrogenase
LIT32_06830	COG3832	glyoxalase III activity
LIT32_06840	COG2358	TRAP transporter, solute receptor (TAXI family
LIT32_06915	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_06920	COG0583	DNA-binding transcription factor activity
LIT32_06925	COG3338	carbonate dehydratase activity
LIT32_06930	COG0165	Argininosuccinate lyase
LIT32_06935	COG0531	amino acid
LIT32_06970	COG2608	mercury ion transmembrane transporter activity
LIT32_06975	COG2217	Heavy metal translocating P-type atpase
LIT32_07030	COG0412	Dienelactone hydrolase
LIT32_07040	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LIT32_07050	COG0805	protein transport
LIT32_07055	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_07065	COG1349	DNA-binding transcription factor activity
LIT32_07080	COG0375	protein maturation
LIT32_07085	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LIT32_07090	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
LIT32_07095	COG0298	carbon dioxide binding
LIT32_07100	COG0409	Hydrogenase expression formation protein
LIT32_07115	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
LIT32_07140	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT32_07150	COG1609	Transcriptional regulator
LIT32_07170	COG1904	glucuronate isomerase
LIT32_07175	COG1312	Catalyzes the dehydration of D-mannonate
LIT32_07180	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_07185	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIT32_07200	COG0438	transferase activity, transferring glycosyl groups
LIT32_07215	COG1587	Uroporphyrinogen-III synthase
LIT32_07220	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LIT32_07225	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LIT32_07240	COG3152	Membrane
LIT32_07245	COG1733	regulation of RNA biosynthetic process
LIT32_07250	COG2814	Major facilitator Superfamily
LIT32_07255	COG0656	L-ascorbic acid biosynthetic process
LIT32_07270	COG2755	lipolytic protein G-D-S-L family
LIT32_07270	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
LIT32_07300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LIT32_07305	COG3813	Protein conserved in bacteria
LIT32_07325	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LIT32_07340	COG1401	restriction endodeoxyribonuclease activity
LIT32_07375	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_07410	COG2814	Major facilitator Superfamily
LIT32_07420	COG1113	amino acid transport
LIT32_07425	COG3546	catalase activity
LIT32_07430	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIT32_07435	COG1834	amidinotransferase
LIT32_07450	COG3403	YqcI/YcgG family
LIT32_07455	COG1280	lysine exporter protein (LysE YggA)
LIT32_07465	COG1733	regulation of RNA biosynthetic process
LIT32_07470	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIT32_07500	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT32_07505	COG2801	Transposase and inactivated derivatives
LIT32_07525	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LIT32_07535	COG2828	Protein conserved in bacteria
LIT32_07540	COG0583	DNA-binding transcription factor activity
LIT32_07545	COG2851	Citrate transporter
LIT32_07555	COG3180	Ammonia monooxygenase
LIT32_07560	COG0583	DNA-binding transcription factor activity
LIT32_07565	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
LIT32_07570	COG1940	carbohydrate kinase activity
LIT32_07590	COG1175	transmembrane transport
LIT32_07595	COG0395	ABC-type sugar transport system, permease component
LIT32_07610	COG0673	inositol 2-dehydrogenase activity
LIT32_07615	COG5578	integral membrane protein
LIT32_07660	COG2188	Transcriptional regulator
LIT32_07670	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LIT32_07675	COG3639	organic phosphonate transmembrane transporter activity
LIT32_07680	COG3639	organic phosphonate transmembrane transporter activity
LIT32_07700	COG3627	carbon phosphorus lyase activity
LIT32_07705	COG4107	phosphonate C-P lyase system protein PhnK
LIT32_07710	COG3454	Phosphonate metabolism
LIT32_07720	COG4778	phosphonate C-P lyase system protein PhnL
LIT32_07725	COG0613	PHP domain protein
LIT32_07740	COG0477	Major facilitator Superfamily
LIT32_07750	COG2318	DinB family
LIT32_07755	COG0024	Methionine aminopeptidase
LIT32_07780	COG1595	DNA-templated transcription, initiation
LIT32_07795	COG1794	racemase activity, acting on amino acids and derivatives
LIT32_07805	COG0431	NADPH-dependent FMN reductase
LIT32_07810	COG5583	Uncharacterized small protein (DUF2292)
LIT32_07815	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT32_07825	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIT32_07830	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT32_07835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIT32_07870	COG1131	(ABC) transporter
LIT32_07875	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LIT32_07880	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_07895	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT32_07900	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LIT32_07915	COG2706	6-phosphogluconolactonase activity
LIT32_07925	COG0765	amino acid transport
LIT32_07930	COG1126	abc transporter atp-binding protein
LIT32_07935	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_07945	COG1960	acyl-CoA dehydrogenase activity
LIT32_07955	COG3290	protein histidine kinase activity
LIT32_07955	COG3829	transcription factor binding
LIT32_07960	COG2322	membrane
LIT32_07975	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LIT32_07980	COG1960	acyl-CoA dehydrogenase activity
LIT32_07985	COG2814	Major facilitator Superfamily
LIT32_07990	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_07995	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT32_08000	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT32_08005	COG1960	acyl-CoA dehydrogenase activity
LIT32_08010	COG0183	Belongs to the thiolase family
LIT32_08020	COG1024	Enoyl-CoA hydratase
LIT32_08030	COG2362	D-Aminopeptidase
LIT32_08035	COG0601	transmembrane transport
LIT32_08040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_08045	COG0444	Belongs to the ABC transporter superfamily
LIT32_08050	COG4166	transmembrane transport
LIT32_08055	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIT32_08060	COG4948	Mandelate Racemase Muconate Lactonizing
LIT32_08065	COG0791	NLP P60 protein
LIT32_08070	COG4608	Belongs to the ABC transporter superfamily
LIT32_08085	COG1388	LysM domain
LIT32_08095	COG4191	Histidine kinase
LIT32_08100	COG1834	amidinotransferase
LIT32_08105	COG1609	Transcriptional regulator
LIT32_08115	COG1363	Peptidase, m42
LIT32_08120	COG1404	Belongs to the peptidase S8 family
LIT32_08130	COG1125	glycine betaine transport
LIT32_08130	COG0517	IMP dehydrogenase activity
LIT32_08135	COG1732	Glycine betaine
LIT32_08140	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_08140	COG3711	transcriptional antiterminator
LIT32_08145	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_08145	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_08145	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_08150	COG1482	cell wall glycoprotein biosynthetic process
LIT32_08160	COG1280	lysine exporter protein (LysE YggA)
LIT32_08180	COG2404	hydrolase activity, acting on ester bonds
LIT32_08200	COG1752	Esterase of the alpha-beta hydrolase superfamily
LIT32_08210	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT32_08220	COG1126	abc transporter atp-binding protein
LIT32_08225	COG0765	amino acid transport
LIT32_08230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_08245	COG3871	stress protein (general stress protein 26)
LIT32_08250	COG0277	FAD linked oxidase domain protein
LIT32_08255	COG2271	Major facilitator Superfamily
LIT32_08270	COG0405	Gamma-glutamyltransferase
LIT32_08275	COG1263	PTS System
LIT32_08275	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_08280	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIT32_08285	COG0363	glucosamine-6-phosphate deaminase activity
LIT32_08290	COG2188	Transcriptional regulator
LIT32_08295	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LIT32_08300	COG0596	Alpha beta hydrolase
LIT32_08305	COG1278	Cold shock
LIT32_08310	COG2824	Alkylphosphonate utilization operon protein PhnA
LIT32_08315	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIT32_08315	COG0723	plastoquinol--plastocyanin reductase activity
LIT32_08320	COG0488	(ABC) transporter
LIT32_08330	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIT32_08335	COG4120	Belongs to the binding-protein-dependent transport system permease family
LIT32_08350	COG2186	Transcriptional regulator
LIT32_08355	COG2084	Dehydrogenase
LIT32_08385	COG1404	Belongs to the peptidase S8 family
LIT32_08395	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LIT32_08405	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_08410	COG2310	stress, protein
LIT32_08415	COG2304	oxidoreductase activity
LIT32_08420	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LIT32_08425	COG1737	Transcriptional regulator
LIT32_08430	COG1263	PTS System
LIT32_08430	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_08440	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT32_08445	COG1472	Belongs to the glycosyl hydrolase 3 family
LIT32_08455	COG1175	transmembrane transport
LIT32_08460	COG0395	ABC-type sugar transport system, permease component
LIT32_08465	COG2972	Histidine kinase
LIT32_08470	COG2207	Transcriptional regulator
LIT32_08485	COG5578	integral membrane protein
LIT32_08495	COG0673	inositol 2-dehydrogenase activity
LIT32_08505	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_08510	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_08515	COG0745	RESPONSE REGULATOR receiver
LIT32_08520	COG5002	protein histidine kinase activity
LIT32_08520	COG3850	Histidine kinase
LIT32_08540	COG2268	Band 7 protein
LIT32_08545	COG1585	Membrane protein implicated in regulation of membrane protease activity
LIT32_08550	COG3835	regulator
LIT32_08555	COG2610	gluconate transmembrane transporter activity
LIT32_08560	COG1929	Belongs to the glycerate kinase type-1 family
LIT32_08565	COG0745	RESPONSE REGULATOR receiver
LIT32_08570	COG2205	protein histidine kinase activity
LIT32_08600	COG0673	inositol 2-dehydrogenase activity
LIT32_08605	COG0673	inositol 2-dehydrogenase activity
LIT32_08610	COG1082	Xylose isomerase domain protein TIM barrel
LIT32_08620	COG1609	Transcriptional regulator
LIT32_08655	COG1846	Transcriptional regulator
LIT32_08660	COG1764	response to oxidative stress
LIT32_08680	COG0840	transmembrane signaling receptor activity
LIT32_08685	COG0789	Transcriptional regulator
LIT32_08705	COG0746	molybdenum cofactor guanylyltransferase activity
LIT32_08710	COG1846	Transcriptional regulator
LIT32_08725	COG1793	dna ligase
LIT32_08725	COG3285	dna ligase
LIT32_08730	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LIT32_08735	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
LIT32_08750	COG0586	Pfam SNARE associated Golgi protein
LIT32_08755	COG1191	sigma factor activity
LIT32_08770	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LIT32_08780	COG0501	Belongs to the peptidase M48B family
LIT32_08785	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIT32_08790	COG0768	penicillin binding
LIT32_08800	COG0737	Belongs to the 5'-nucleotidase family
LIT32_08800	COG1525	nuclease
LIT32_08800	COG4085	toxin activity
LIT32_08830	COG3594	Acyltransferase
LIT32_08835	COG5002	protein histidine kinase activity
LIT32_08840	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LIT32_08865	COG1129	ABC transporter
LIT32_08870	COG1879	ABC-type sugar transport system periplasmic component
LIT32_08875	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
LIT32_08880	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
LIT32_08885	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LIT32_08890	COG0436	Aminotransferase
LIT32_08895	COG1850	ribulose-bisphosphate carboxylase activity
LIT32_08900	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
LIT32_08905	COG0235	Class ii aldolase
LIT32_08910	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
LIT32_08930	COG0667	Aldo Keto reductase
LIT32_08935	COG3852	Histidine kinase
LIT32_08940	COG0737	Belongs to the 5'-nucleotidase family
LIT32_08945	COG1846	Transcriptional regulator
LIT32_08950	COG1360	Flagellar Motor Protein
LIT32_08955	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LIT32_08970	COG0542	response to heat
LIT32_08980	COG3949	Membrane
LIT32_08985	COG1253	flavin adenine dinucleotide binding
LIT32_09000	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LIT32_09005	COG0720	synthase
LIT32_09010	COG0602	queuosine metabolic process
LIT32_09015	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LIT32_09020	COG1278	Cold shock
LIT32_09040	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIT32_09055	COG2323	membrane
LIT32_09060	COG0671	phosphoesterase, PA-phosphatase related
LIT32_09080	COG2135	peptidase activity
LIT32_09085	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LIT32_09090	COG3584	3D domain protein
LIT32_09090	COG3583	domain protein
LIT32_09095	COG1214	PFAM Peptidase M22, glycoprotease
LIT32_09095	COG0456	acetyltransferase
LIT32_09100	COG4873	Protein conserved in bacteria
LIT32_09105	COG4667	esterase of the alpha-beta hydrolase superfamily
LIT32_09125	COG3773	Cell wall hydrolase
LIT32_09145	COG2244	polysaccharide biosynthetic process
LIT32_09150	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT32_09180	COG3209	COG3209 Rhs family protein
LIT32_09190	COG2217	Heavy metal translocating P-type atpase
LIT32_09215	COG0006	proline dipeptidase activity
LIT32_09220	COG1525	nuclease
LIT32_09255	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIT32_09270	COG3300	MHYT domain
LIT32_09270	COG5001	Diguanylate cyclase
LIT32_09275	COG0561	phosphatase activity
LIT32_09290	COG3711	transcriptional antiterminator
LIT32_09295	COG1263	PTS System
LIT32_09295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_09295	COG2190	(PTS) system
LIT32_09300	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_09305	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LIT32_09310	COG4191	Histidine kinase
LIT32_09320	COG1533	DNA photolyase activity
LIT32_09340	COG2084	Dehydrogenase
LIT32_09345	COG0456	acetyltransferase
LIT32_09350	COG2340	Cysteine-rich secretory protein family
LIT32_09355	COG0768	penicillin binding
LIT32_09370	COG4191	Histidine kinase
LIT32_09375	COG0436	Aminotransferase
LIT32_09380	COG0598	Magnesium transport protein CorA
LIT32_09415	COG2205	protein histidine kinase activity
LIT32_09435	COG0835	chemotaxis
LIT32_09435	COG0784	Response regulator, receiver
LIT32_09450	COG3437	response regulator, receiver
LIT32_09450	COG2770	Histidine kinase
LIT32_09455	COG2814	Major facilitator Superfamily
LIT32_09460	COG1376	ErfK ybiS ycfS ynhG family protein
LIT32_09470	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LIT32_09475	COG3300	MHYT domain
LIT32_09475	COG5001	Diguanylate cyclase
LIT32_09480	COG1408	metallophosphoesterase
LIT32_09485	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_09490	COG2200	EAL domain
LIT32_09520	COG4703	Protein of unknown function (DUF1797)
LIT32_09530	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
LIT32_09540	COG0517	IMP dehydrogenase activity
LIT32_09545	COG0477	Major facilitator Superfamily
LIT32_09560	COG0583	DNA-binding transcription factor activity
LIT32_09565	COG0716	FMN binding
LIT32_09575	COG0716	FMN binding
LIT32_09585	COG1473	amidohydrolase
LIT32_09595	COG0668	transmembrane transport
LIT32_09600	COG0450	alkyl hydroperoxide reductase
LIT32_09605	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_09610	COG1278	Cold shock
LIT32_09635	COG0493	'glutamate synthase
LIT32_09660	COG3835	regulator
LIT32_09665	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_09670	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIT32_09675	COG1349	DNA-binding transcription factor activity
LIT32_09680	COG0110	maltose O-acetyltransferase activity
LIT32_09695	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIT32_09700	COG0655	NAD(P)H dehydrogenase (quinone) activity
LIT32_09705	COG1132	(ABC) transporter
LIT32_09710	COG1132	(ABC) transporter
LIT32_09720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LIT32_09725	COG1136	(ABC) transporter
LIT32_09730	COG0577	efflux transmembrane transporter activity
LIT32_09760	COG0488	(ABC) transporter
LIT32_09770	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LIT32_09780	COG1307	EDD domain protein, DegV family
LIT32_09785	COG2309	aminopeptidase activity
LIT32_09790	COG1960	acyl-CoA dehydrogenase activity
LIT32_09800	COG0488	(ABC) transporter
LIT32_09805	COG2720	vancomycin resistance protein
LIT32_09810	COG1077	Cell shape determining protein MreB Mrl
LIT32_09815	COG1607	acyl-coa hydrolase
LIT32_09820	COG4637	Psort location Cytoplasmic, score
LIT32_09825	COG3852	Histidine kinase
LIT32_09830	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
LIT32_09830	COG2105	PFAM AIG2 family protein
LIT32_09835	COG1271	oxidase subunit
LIT32_09840	COG1294	oxidase, subunit
LIT32_09845	COG0569	domain protein
LIT32_09850	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LIT32_09860	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIT32_09870	COG0561	phosphatase activity
LIT32_09875	COG0242	peptide deformylase activity
LIT32_09890	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIT32_09895	COG0022	dehydrogenase e1 component
LIT32_09900	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIT32_09905	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIT32_09910	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_09940	COG1982	Orn Lys Arg decarboxylase major
LIT32_09945	COG1960	acyl-CoA dehydrogenase activity
LIT32_09950	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_09955	COG0183	Belongs to the thiolase family
LIT32_09965	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_09970	COG1309	transcriptional regulator
LIT32_09975	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT32_09980	COG1024	Enoyl-CoA hydratase
LIT32_10000	COG4221	oxidoreductase activity
LIT32_10005	COG1024	Enoyl-CoA hydratase
LIT32_10015	COG0559	Belongs to the binding-protein-dependent transport system permease family
LIT32_10030	COG0410	ABC transporter
LIT32_10040	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_10055	COG4476	Belongs to the UPF0223 family
LIT32_10070	COG0483	inositol monophosphate 1-phosphatase activity
LIT32_10085	COG1217	gtp-binding protein TYPA
LIT32_10105	COG4896	Protein conserved in bacteria
LIT32_10120	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LIT32_10125	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LIT32_10130	COG2066	Belongs to the glutaminase family
LIT32_10135	COG4838	Belongs to the UPF0358 family
LIT32_10140	COG0772	Belongs to the SEDS family
LIT32_10145	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LIT32_10150	COG1612	heme a metabolic process
LIT32_10160	COG2010	Cytochrome c
LIT32_10160	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LIT32_10165	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LIT32_10170	COG1845	cytochrome c oxidase, subunit III
LIT32_10180	COG3336	cytochrome c oxidase
LIT32_10200	COG0628	permease
LIT32_10210	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
LIT32_10215	COG2340	Cysteine-rich secretory protein family
LIT32_10240	COG3679	Belongs to the UPF0342 family
LIT32_10245	COG4471	UPF0298 protein
LIT32_10255	COG0742	ribosomal rna small subunit methyltransferase
LIT32_10260	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LIT32_10265	COG3314	Sporulation integral membrane protein YlbJ
LIT32_10270	COG1752	Esterase of the alpha-beta hydrolase superfamily
LIT32_10275	COG3480	Lon protease (S16) C-terminal proteolytic domain
LIT32_10280	COG1323	Belongs to the UPF0348 family
LIT32_10285	COG1399	metal-binding, possibly nucleic acid-binding protein
LIT32_10290	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LIT32_10295	COG1024	Enoyl-CoA hydratase
LIT32_10305	COG0454	-acetyltransferase
LIT32_10310	COG0439	Biotin carboxylase
LIT32_10315	COG0511	ligase activity, forming carbon-carbon bonds
LIT32_10320	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LIT32_10325	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LIT32_10335	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
LIT32_10340	COG2001	Belongs to the MraZ family
LIT32_10345	COG0275	rRNA processing
LIT32_10350	COG4839	cell division protein FtsL
LIT32_10355	COG0768	penicillin binding
LIT32_10360	COG0768	penicillin binding
LIT32_10365	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LIT32_10370	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LIT32_10375	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LIT32_10380	COG0772	Belongs to the SEDS family
LIT32_10390	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LIT32_10395	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LIT32_10400	COG3879	Bacterial protein of unknown function (DUF881)
LIT32_10405	COG3879	Bacterial protein of unknown function (DUF881)
LIT32_10410	COG3856	small basic protein
LIT32_10415	COG0849	cell division
LIT32_10420	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LIT32_10425	COG1404	Belongs to the peptidase S8 family
LIT32_10425	COG4412	M6 family metalloprotease domain protein
LIT32_10435	COG1191	sigma factor activity
LIT32_10440	COG1191	sigma factor activity
LIT32_10445	COG3689	TIGRFAM TIGR03943 family protein
LIT32_10450	COG0701	Predicted permease
LIT32_10455	COG1873	PFAM PRC-barrel domain
LIT32_10460	COG1496	oxidoreductase activity
LIT32_10465	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LIT32_10470	COG1799	cell septum assembly
LIT32_10475	COG0762	integral membrane protein
LIT32_10480	COG2302	S4 RNA-binding domain
LIT32_10485	COG3599	regulation of cell shape
LIT32_10490	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LIT32_10495	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LIT32_10505	COG0564	pseudouridine synthase activity
LIT32_10510	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LIT32_10525	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LIT32_10530	COG0505	Belongs to the CarA family
LIT32_10535	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LIT32_10540	COG0543	2 iron, 2 sulfur cluster binding
LIT32_10545	COG0167	dihydroorotate dehydrogenase activity
LIT32_10550	COG0284	orotidine-5'-phosphate decarboxylase activity
LIT32_10570	COG0306	phosphate transporter
LIT32_10580	COG0529	Catalyzes the synthesis of activated sulfate
LIT32_10590	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
LIT32_10605	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LIT32_10610	COG1561	YicC-like family, N-terminal region
LIT32_10620	COG0194	GDP metabolic process
LIT32_10630	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIT32_10635	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LIT32_10650	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LIT32_10650	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LIT32_10660	COG0631	protein serine/threonine phosphatase activity
LIT32_10665	COG0515	serine threonine protein kinase
LIT32_10665	COG2815	serine threonine protein kinase
LIT32_10670	COG1162	GTPase activity
LIT32_10675	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LIT32_10680	COG1564	THIamine pyrophosphokinase
LIT32_10695	COG1302	Protein conserved in bacteria
LIT32_10700	COG1461	Dihydroxyacetone kinase
LIT32_10705	COG1760	l-serine dehydratase
LIT32_10710	COG1760	l-serine dehydratase
LIT32_10715	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LIT32_10720	COG1349	DNA-binding transcription factor activity
LIT32_10725	COG0416	fatty acid biosynthetic process
LIT32_10730	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LIT32_10735	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_10740	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIT32_10750	COG1196	nuclear chromosome segregation
LIT32_10755	COG0552	protein localization to endoplasmic reticulum
LIT32_10765	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LIT32_10775	COG1837	Belongs to the UPF0109 family
LIT32_10785	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LIT32_10790	COG0336	Belongs to the RNA methyltransferase TrmD family
LIT32_10795	COG0335	large ribosomal subunit rRNA binding
LIT32_10820	COG2257	FlhB HrpN YscU SpaS Family
LIT32_10830	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LIT32_10835	COG0758	DNA mediated transformation
LIT32_10840	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LIT32_10845	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LIT32_10850	COG4974	Belongs to the 'phage' integrase family
LIT32_10860	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LIT32_10865	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LIT32_10870	COG1815	bacterial-type flagellum-dependent cell motility
LIT32_10875	COG1558	bacterial-type flagellum-dependent cell motility
LIT32_10880	COG1677	Flagellar hook-basal body complex protein FliE
LIT32_10885	COG1766	The M ring may be actively involved in energy transduction
LIT32_10890	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIT32_10900	COG1157	protein secretion by the type III secretion system
LIT32_10905	COG2882	bacterial-type flagellum organization
LIT32_10915	COG3144	bacterial-type flagellum assembly
LIT32_10920	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
LIT32_10930	COG4786	Flagellar basal body rod
LIT32_10935	COG1582	Flagellar protein (FlbD)
LIT32_10940	COG1580	Controls the rotational direction of flagella during chemotaxis
LIT32_10945	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIT32_10950	COG1776	CheC inhibitor of MCP methylation
LIT32_10950	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LIT32_10955	COG2201	protein-glutamate methylesterase activity
LIT32_10960	COG3190	flagellar
LIT32_10965	COG1338	Plays a role in the flagellum-specific transport system
LIT32_10970	COG1987	bacterial-type flagellum assembly
LIT32_10975	COG1684	flagellar biosynthetic protein fliR
LIT32_10980	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LIT32_10985	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LIT32_10990	COG1419	protein localization to endoplasmic reticulum
LIT32_10995	COG0455	bacterial-type flagellum organization
LIT32_11000	COG2201	protein-glutamate methylesterase activity
LIT32_11005	COG2198	Histidine kinase
LIT32_11005	COG0643	Histidine kinase
LIT32_11010	COG0835	chemotaxis
LIT32_11015	COG1776	CheC inhibitor of MCP methylation
LIT32_11020	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
LIT32_11025	COG1191	sigma factor activity
LIT32_11035	COG0052	Belongs to the universal ribosomal protein uS2 family
LIT32_11045	COG0528	UMP kinase activity
LIT32_11050	COG0233	cytoplasmic translational termination
LIT32_11055	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LIT32_11060	COG4589	Belongs to the CDS family
LIT32_11065	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
LIT32_11070	COG0750	zinc metalloprotease
LIT32_11075	COG0442	prolyl-tRNA aminoacylation
LIT32_11080	COG2176	DNA-directed DNA polymerase activity
LIT32_11085	COG0779	Required for maturation of 30S ribosomal subunits
LIT32_11090	COG0195	Participates in both transcription termination and antitermination
LIT32_11095	COG2740	Nucleic-acid-binding protein implicated in transcription termination
LIT32_11100	COG1358	cellular component organization or biogenesis
LIT32_11110	COG1550	Protein conserved in bacteria
LIT32_11115	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LIT32_11120	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LIT32_11125	COG0196	riboflavin kinase activity
LIT32_11135	COG1185	polyribonucleotide nucleotidyltransferase activity
LIT32_11140	COG0726	polysaccharide deacetylase
LIT32_11145	COG0612	Peptidase, M16
LIT32_11150	COG1873	PFAM PRC-barrel domain
LIT32_11155	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIT32_11160	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIT32_11165	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LIT32_11170	COG0527	aspartate kinase activity
LIT32_11180	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIT32_11185	COG0740	serine-type endopeptidase activity
LIT32_11195	COG1674	ftsk spoiiie
LIT32_11195	COG4980	gas vesicle protein
LIT32_11200	COG2188	Transcriptional regulator
LIT32_11205	COG1744	ABC transporter substrate-binding protein PnrA-like
LIT32_11210	COG3845	ABC transporter
LIT32_11215	COG4603	Belongs to the binding-protein-dependent transport system permease family
LIT32_11220	COG1079	Belongs to the binding-protein-dependent transport system permease family
LIT32_11230	COG0612	Peptidase, M16
LIT32_11235	COG0612	Peptidase, M16
LIT32_11240	COG0300	oxidoreductase activity
LIT32_11255	COG1426	Protein conserved in bacteria
LIT32_11260	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LIT32_11265	COG1058	Belongs to the CinA family
LIT32_11265	COG1546	Belongs to the CinA family
LIT32_11270	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LIT32_11275	COG1418	mRNA catabolic process
LIT32_11280	COG1692	metallophosphoesterase
LIT32_11285	COG2359	stage V sporulation protein S
LIT32_11300	COG1013	pyruvate-flavodoxin oxidoreductase activity
LIT32_11305	COG1063	alcohol dehydrogenase
LIT32_11310	COG0156	8-amino-7-oxononanoate synthase activity
LIT32_11315	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LIT32_11320	COG4550	Control of competence regulator ComK, YlbF/YmcA
LIT32_11355	COG1231	oxidoreductase activity
LIT32_11380	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LIT32_11390	COG1609	Transcriptional regulator
LIT32_11435	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LIT32_11445	COG0135	phosphoribosylanthranilate isomerase activity
LIT32_11475	COG1609	Transcriptional regulator
LIT32_11485	COG1653	transport
LIT32_11490	COG1175	transmembrane transport
LIT32_11520	COG1131	(ABC) transporter
LIT32_11540	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LIT32_11540	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LIT32_11550	COG0697	spore germination
LIT32_11560	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LIT32_11565	COG0384	phenazine biosynthesis protein PhzF
LIT32_11570	COG0583	DNA-binding transcription factor activity
LIT32_11580	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LIT32_11585	COG0596	Alpha beta hydrolase
LIT32_11620	COG0745	RESPONSE REGULATOR receiver
LIT32_11625	COG2205	protein histidine kinase activity
LIT32_11630	COG1136	(ABC) transporter
LIT32_11635	COG0577	efflux transmembrane transporter activity
LIT32_11640	COG2112	serine threonine protein kinase
LIT32_11660	COG0702	epimerase
LIT32_11675	COG3655	Transcriptional regulator
LIT32_11680	COG3739	integral membrane protein
LIT32_11735	COG2318	DinB family
LIT32_11740	COG1595	DNA-templated transcription, initiation
LIT32_11760	COG2801	Transposase and inactivated derivatives
LIT32_11780	COG0745	RESPONSE REGULATOR receiver
LIT32_11785	COG5002	protein histidine kinase activity
LIT32_11790	COG1388	LysM domain
LIT32_11815	COG3620	sequence-specific DNA binding
LIT32_11840	COG1349	DNA-binding transcription factor activity
LIT32_11845	COG0673	inositol 2-dehydrogenase activity
LIT32_11855	COG1609	Transcriptional regulator
LIT32_11860	COG0698	ribose 5-phosphate isomerase
LIT32_11865	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT32_11870	COG1653	transport
LIT32_11875	COG1175	transmembrane transport
LIT32_11880	COG0395	ABC-type sugar transport system, permease component
LIT32_11885	COG5578	integral membrane protein
LIT32_11895	COG0697	spore germination
LIT32_11900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_11905	COG1994	Peptidase M50
LIT32_11915	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LIT32_11920	COG1923	regulation of RNA biosynthetic process
LIT32_11925	COG0464	growth
LIT32_11930	COG2860	membrane
LIT32_11935	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LIT32_11940	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
LIT32_11945	COG0789	Transcriptional regulator
LIT32_11950	COG0174	glutamine synthetase
LIT32_11960	COG1802	Transcriptional regulator
LIT32_11965	COG1114	Component of the transport system for branched-chain amino acids
LIT32_11975	COG0861	Integral membrane protein TerC family
LIT32_11985	COG0456	acetyltransferase
LIT32_11995	COG1396	sequence-specific DNA binding
LIT32_12015	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LIT32_12020	COG1388	LysM domain
LIT32_12025	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LIT32_12030	COG4224	UPF0291 protein
LIT32_12035	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LIT32_12045	COG3763	UPF0154 protein
LIT32_12065	COG0785	Cytochrome C biogenesis protein
LIT32_12070	COG2201	protein-glutamate methylesterase activity
LIT32_12075	COG4846	Membrane protein involved in cytochrome C biogenesis
LIT32_12105	COG0071	Belongs to the small heat shock protein (HSP20) family
LIT32_12125	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LIT32_12130	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_12150	COG0824	Thioesterase
LIT32_12160	COG4841	protein insertion into membrane
LIT32_12165	COG2843	Capsule synthesis protein
LIT32_12170	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LIT32_12175	COG1832	CoA-binding protein
LIT32_12190	COG0187	DNA topoisomerase II activity
LIT32_12195	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIT32_12210	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_12215	COG1414	Transcriptional regulator
LIT32_12220	COG1268	BioY protein
LIT32_12225	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_12230	COG0183	Belongs to the thiolase family
LIT32_12245	COG4974	Belongs to the 'phage' integrase family
LIT32_12270	COG1204	response to ionizing radiation
LIT32_12295	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LIT32_12300	COG0583	DNA-binding transcription factor activity
LIT32_12315	COG2264	protein methyltransferase activity
LIT32_12335	COG0457	Tetratricopeptide repeat
LIT32_12335	COG0515	serine threonine protein kinase
LIT32_12425	COG3545	Serine hydrolase
LIT32_12445	COG1131	(ABC) transporter
LIT32_12460	COG0640	Transcriptional regulator
LIT32_12475	COG3541	Predicted nucleotidyltransferase
LIT32_12485	COG0640	Transcriptional regulator
LIT32_12500	COG0406	alpha-ribazole phosphatase activity
LIT32_12505	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
LIT32_12515	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LIT32_12520	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
LIT32_12525	COG1120	ATPase activity
LIT32_12530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT32_12535	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT32_12540	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
LIT32_12545	COG1492	cobalamin metabolic process
LIT32_12550	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
LIT32_12570	COG3383	formate dehydrogenase (NAD+) activity
LIT32_12595	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIT32_12610	COG1695	Transcriptional regulator
LIT32_12615	COG4589	Belongs to the CDS family
LIT32_12620	COG3906	Belongs to the UPF0473 family
LIT32_12630	COG0322	excinuclease ABC activity
LIT32_12640	COG5553	Cysteine dioxygenase type I
LIT32_12665	COG1376	ErfK ybiS ycfS ynhG family protein
LIT32_12720	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LIT32_12740	COG3764	Sortase (surface protein transpeptidase)
LIT32_12770	COG2310	stress, protein
LIT32_12780	COG0463	Glycosyl transferase, family 2
LIT32_12790	COG2223	nitrite transmembrane transporter activity
LIT32_12795	COG2427	Protein of unknown function (DUF1641)
LIT32_12800	COG3383	formate dehydrogenase (NAD+) activity
LIT32_12805	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LIT32_12810	COG0314	molybdopterin synthase activity
LIT32_12815	COG1763	Mo-molybdopterin cofactor biosynthetic process
LIT32_12820	COG0303	'Molybdopterin
LIT32_12830	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LIT32_12835	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LIT32_12865	COG2318	DinB family
LIT32_12875	COG0346	lactoylglutathione lyase activity
LIT32_12890	COG0395	ABC-type sugar transport system, permease component
LIT32_12895	COG1175	transmembrane transport
LIT32_12935	COG2814	Major facilitator Superfamily
LIT32_12940	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIT32_12945	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LIT32_12950	COG1378	Sugar-specific transcriptional regulator TrmB
LIT32_12955	COG1280	lysine exporter protein (LysE YggA)
LIT32_12960	COG1193	negative regulation of DNA recombination
LIT32_12965	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LIT32_12970	COG1984	allophanate hydrolase subunit 2
LIT32_12975	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LIT32_12980	COG1914	H( )-stimulated, divalent metal cation uptake system
LIT32_12985	COG0457	Tetratricopeptide repeat
LIT32_12985	COG0463	Glycosyl transferase, family 2
LIT32_13010	COG0438	transferase activity, transferring glycosyl groups
LIT32_13020	COG0673	inositol 2-dehydrogenase activity
LIT32_13035	COG1556	Lactate utilization protein
LIT32_13040	COG1139	Iron-sulfur cluster binding protein
LIT32_13045	COG0247	lactate metabolic process
LIT32_13065	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LIT32_13070	COG2169	Transcriptional regulator
LIT32_13085	COG1940	carbohydrate kinase activity
LIT32_13090	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LIT32_13110	COG2972	Histidine kinase
LIT32_13115	COG2207	Transcriptional regulator
LIT32_13115	COG4753	response regulator
LIT32_13125	COG0346	lactoylglutathione lyase activity
LIT32_13130	COG1620	l-lactate permease
LIT32_13135	COG1414	Transcriptional regulator
LIT32_13140	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIT32_13145	COG0281	malic enzyme
LIT32_13150	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LIT32_13155	COG0277	FAD linked oxidase domain protein
LIT32_13160	COG0247	lactate metabolic process
LIT32_13165	COG0277	FAD linked oxidase domain protein
LIT32_13175	COG3173	Aminoglycoside phosphotransferase
LIT32_13190	COG0673	inositol 2-dehydrogenase activity
LIT32_13195	COG0667	Aldo Keto reductase
LIT32_13200	COG2391	methyltransferase activity
LIT32_13205	COG3773	Cell wall hydrolase
LIT32_13210	COG0456	acetyltransferase
LIT32_13215	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LIT32_13215	COG3153	acetyltransferase
LIT32_13225	COG4191	Histidine kinase
LIT32_13265	COG2318	DinB family
LIT32_13270	COG3340	Belongs to the peptidase S51 family
LIT32_13305	COG1132	(ABC) transporter
LIT32_13320	COG1132	(ABC) transporter
LIT32_13355	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LIT32_13360	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LIT32_13365	COG0110	maltose O-acetyltransferase activity
LIT32_13370	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LIT32_13380	COG0463	Glycosyl transferase, family 2
LIT32_13380	COG1216	Glycosyl transferase, family 2
LIT32_13390	COG0110	maltose O-acetyltransferase activity
LIT32_13410	COG1216	Glycosyl transferase, family 2
LIT32_13440	COG1215	transferase activity, transferring glycosyl groups
LIT32_13445	COG0438	transferase activity, transferring glycosyl groups
LIT32_13450	COG1216	Glycosyl transferase, family 2
LIT32_13450	COG1442	glycosyl transferase family 8
LIT32_13455	COG0438	transferase activity, transferring glycosyl groups
LIT32_13460	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIT32_13465	COG1086	Polysaccharide biosynthesis protein
LIT32_13475	COG0489	protein tyrosine kinase activity
LIT32_13480	COG3944	biosynthesis protein
LIT32_13500	COG1960	acyl-CoA dehydrogenase activity
LIT32_13510	COG1454	alcohol dehydrogenase
LIT32_13525	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT32_13530	COG0527	aspartate kinase activity
LIT32_13535	COG2223	nitrite transmembrane transporter activity
LIT32_13540	COG1388	LysM domain
LIT32_13540	COG3584	3D domain protein
LIT32_13545	COG1309	transcriptional regulator
LIT32_13550	COG3104	oligopeptide transport
LIT32_13555	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LIT32_13565	COG2205	protein histidine kinase activity
LIT32_13575	COG0561	phosphatase activity
LIT32_13580	COG1349	DNA-binding transcription factor activity
LIT32_13605	COG0076	glutamate decarboxylase activity
LIT32_13615	COG0657	acetylesterase activity
LIT32_13630	COG0351	phosphomethylpyrimidine kinase
LIT32_13635	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LIT32_13640	COG1280	lysine exporter protein (LysE YggA)
LIT32_13645	COG0733	neurotransmitter:sodium symporter activity
LIT32_13670	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT32_13685	COG0778	Nitroreductase
LIT32_13760	COG0310	cobalt ion transport
LIT32_13765	COG1930	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
LIT32_13775	COG1122	ATPase activity
LIT32_13780	COG2318	DinB family
LIT32_13795	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_13805	COG1164	Oligoendopeptidase f
LIT32_13830	COG4191	Histidine kinase
LIT32_13850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LIT32_13870	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_13875	COG4975	Glucose uptake
LIT32_13885	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_13895	COG1657	PFAM Prenyltransferase squalene oxidase
LIT32_13905	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_13915	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_13925	COG1902	pentaerythritol trinitrate reductase activity
LIT32_13940	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIT32_13945	COG0567	Dehydrogenase, E1 component
LIT32_13955	COG4548	von Willebrand factor, type A
LIT32_13960	COG0714	Associated with various cellular activities
LIT32_13965	COG0697	spore germination
LIT32_13985	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT32_13990	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT32_13995	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_14000	COG1733	regulation of RNA biosynthetic process
LIT32_14005	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LIT32_14010	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LIT32_14015	COG0300	oxidoreductase activity
LIT32_14020	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_14025	COG2720	vancomycin resistance protein
LIT32_14030	COG1368	sulfuric ester hydrolase activity
LIT32_14035	COG2032	superoxide dismutase activity
LIT32_14040	COG0018	arginyl-trna synthetase
LIT32_14050	COG0791	NLP P60 protein
LIT32_14050	COG1388	LysM domain
LIT32_14065	COG2252	PERMEase
LIT32_14070	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LIT32_14075	COG0534	Mate efflux family protein
LIT32_14080	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LIT32_14085	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LIT32_14095	COG2962	Rard protein
LIT32_14110	COG4876	unkown
LIT32_14115	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_14120	COG1733	regulation of RNA biosynthetic process
LIT32_14125	COG0778	Nitroreductase
LIT32_14130	COG0400	carboxylic ester hydrolase activity
LIT32_14135	COG0655	NAD(P)H dehydrogenase (quinone) activity
LIT32_14140	COG3409	Peptidoglycan-binding domain 1 protein
LIT32_14140	COG0793	Belongs to the peptidase S41A family
LIT32_14145	COG2226	methyltransferase
LIT32_14155	COG3663	DNA glycosylase
LIT32_14160	COG1876	peptidase activity
LIT32_14165	COG0813	purine-nucleoside phosphorylase activity
LIT32_14180	COG0671	phosphoesterase, PA-phosphatase related
LIT32_14190	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_14195	COG0730	response to heat
LIT32_14225	COG4326	sporulation control protein
LIT32_14230	COG4991	sh3 domain protein
LIT32_14230	COG3064	Membrane
LIT32_14230	COG0515	serine threonine protein kinase
LIT32_14265	COG5522	Integral membrane protein (intg_mem_TP0381)
LIT32_14295	COG1368	sulfuric ester hydrolase activity
LIT32_14300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LIT32_14305	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_14310	COG2814	Major facilitator Superfamily
LIT32_14315	COG1388	LysM domain
LIT32_14315	COG0791	NLP P60 protein
LIT32_14320	COG2602	Beta-lactamase
LIT32_14325	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_14330	COG2031	fatty acid transporter
LIT32_14345	COG2814	Major facilitator Superfamily
LIT32_14355	COG2318	DinB family
LIT32_14360	COG0477	Major facilitator Superfamily
LIT32_14365	COG1846	Transcriptional regulator
LIT32_14370	COG4479	Belongs to the UPF0346 family
LIT32_14380	COG1509	lysine 2,3-aminomutase activity
LIT32_14385	COG3829	transcription factor binding
LIT32_14390	COG0456	acetyltransferase
LIT32_14395	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_14400	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT32_14405	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LIT32_14410	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LIT32_14415	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIT32_14445	COG2357	RelA SpoT domain protein
LIT32_14450	COG1393	Belongs to the ArsC family
LIT32_14470	COG0640	Transcriptional regulator
LIT32_14475	COG3290	protein histidine kinase activity
LIT32_14475	COG3829	transcription factor binding
LIT32_14480	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_14485	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LIT32_14490	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LIT32_14495	COG2610	gluconate transmembrane transporter activity
LIT32_14500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_14510	COG0596	Alpha beta hydrolase
LIT32_14525	COG0346	lactoylglutathione lyase activity
LIT32_14530	COG0765	amino acid transport
LIT32_14535	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_14555	COG1846	Transcriptional regulator
LIT32_14560	COG2153	protein acetylation
LIT32_14570	COG2188	Transcriptional regulator
LIT32_14575	COG2723	6-phospho-beta-galactosidase activity
LIT32_14580	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LIT32_14600	COG4335	DNA alkylation repair
LIT32_14605	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LIT32_14610	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LIT32_14615	COG0583	DNA-binding transcription factor activity
LIT32_14635	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LIT32_14645	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LIT32_14650	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LIT32_14660	COG0598	Magnesium transport protein CorA
LIT32_14670	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LIT32_14680	COG1174	glycine betaine transport
LIT32_14690	COG1174	glycine betaine transport
LIT32_14695	COG0517	IMP dehydrogenase activity
LIT32_14695	COG1125	glycine betaine transport
LIT32_14705	COG1114	Component of the transport system for branched-chain amino acids
LIT32_14715	COG1785	Belongs to the alkaline phosphatase family
LIT32_14750	COG1595	DNA-templated transcription, initiation
LIT32_14790	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT32_14815	COG0697	spore germination
LIT32_14820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_14835	COG0574	Belongs to the PEP-utilizing enzyme family
LIT32_14835	COG3848	Pyruvate phosphate dikinase
LIT32_14845	COG1404	Belongs to the peptidase S8 family
LIT32_14855	COG3850	Histidine kinase
LIT32_14855	COG5002	protein histidine kinase activity
LIT32_14860	COG0745	RESPONSE REGULATOR receiver
LIT32_14865	COG1136	(ABC) transporter
LIT32_14870	COG0577	efflux transmembrane transporter activity
LIT32_14895	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT32_14900	COG3191	aminopeptidase activity
LIT32_14905	COG4684	Psort location CytoplasmicMembrane, score
LIT32_14910	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIT32_14920	COG1122	ATPase activity
LIT32_14930	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_14935	COG0473	3-isopropylmalate dehydrogenase activity
LIT32_14940	COG3290	protein histidine kinase activity
LIT32_14940	COG3829	transcription factor binding
LIT32_14950	COG0583	DNA-binding transcription factor activity
LIT32_14955	COG0372	Belongs to the citrate synthase family
LIT32_14970	COG0010	Belongs to the arginase family
LIT32_14980	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_14985	COG0531	amino acid
LIT32_14990	COG4978	Transcriptional regulator
LIT32_14990	COG0789	Transcriptional regulator
LIT32_14995	COG1404	Belongs to the peptidase S8 family
LIT32_15000	COG2197	response regulator
LIT32_15005	COG4585	Histidine kinase
LIT32_15040	COG1917	Cupin 2, conserved barrel domain protein
LIT32_15040	COG4977	sequence-specific DNA binding
LIT32_15050	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LIT32_15080	COG1595	DNA-templated transcription, initiation
LIT32_15090	COG1940	carbohydrate kinase activity
LIT32_15100	COG3833	ABC-type maltose transport systems, permease component
LIT32_15105	COG1175	transmembrane transport
LIT32_15115	COG3250	beta-galactosidase activity
LIT32_15120	COG1940	carbohydrate kinase activity
LIT32_15125	COG2318	DinB family
LIT32_15135	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIT32_15135	COG0456	acetyltransferase
LIT32_15160	COG2814	Major facilitator Superfamily
LIT32_15175	COG0666	response to abiotic stimulus
LIT32_15180	COG0745	RESPONSE REGULATOR receiver
LIT32_15185	COG5002	protein histidine kinase activity
LIT32_15195	COG2814	Major facilitator Superfamily
LIT32_15205	COG0534	Mate efflux family protein
LIT32_15215	COG0673	inositol 2-dehydrogenase activity
LIT32_15220	COG0673	inositol 2-dehydrogenase activity
LIT32_15225	COG0673	inositol 2-dehydrogenase activity
LIT32_15235	COG0395	ABC-type sugar transport system, permease component
LIT32_15240	COG1175	transmembrane transport
LIT32_15245	COG1653	transport
LIT32_15300	COG1486	melibiose metabolic process
LIT32_15305	COG5578	integral membrane protein
LIT32_15310	COG0395	ABC-type sugar transport system, permease component
LIT32_15315	COG1175	transmembrane transport
LIT32_15330	COG0531	amino acid
LIT32_15355	COG1126	abc transporter atp-binding protein
LIT32_15360	COG0765	amino acid transport
LIT32_15365	COG0765	amino acid transport
LIT32_15370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_15375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_15380	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LIT32_15385	COG0456	acetyltransferase
LIT32_15390	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT32_15395	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LIT32_15405	COG1464	Belongs to the NlpA lipoprotein family
LIT32_15410	COG0383	alpha-mannosidase activity
LIT32_15415	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_15415	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_15415	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_15420	COG1737	Transcriptional regulator
LIT32_15435	COG1309	transcriptional regulator
LIT32_15440	COG1132	(ABC) transporter
LIT32_15455	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIT32_15475	COG1113	amino acid transport
LIT32_15480	COG1404	Belongs to the peptidase S8 family
LIT32_15485	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_15490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LIT32_15500	COG2202	Pas domain
LIT32_15500	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_15505	COG0494	nUDIX hydrolase
LIT32_15510	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LIT32_15530	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LIT32_15540	COG1609	Transcriptional regulator
LIT32_15555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT32_15570	COG0778	Nitroreductase
LIT32_15575	COG1846	Transcriptional regulator
LIT32_15580	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LIT32_15595	COG0697	spore germination
LIT32_15600	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LIT32_15605	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LIT32_15620	COG1357	PFAM Pentapeptide repeats (8 copies)
LIT32_15625	COG0546	phosphoglycolate phosphatase activity
LIT32_15635	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_15640	COG2318	DinB family
LIT32_15650	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_15665	COG1131	(ABC) transporter
LIT32_15670	COG1309	transcriptional regulator
LIT32_15680	COG0697	spore germination
LIT32_15685	COG1917	Cupin 2, conserved barrel domain protein
LIT32_15685	COG2207	Transcriptional regulator
LIT32_15690	COG1619	proteins homologs of microcin C7 resistance protein MccF
LIT32_15700	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_15710	COG0477	Major facilitator Superfamily
LIT32_15715	COG2188	Transcriptional regulator
LIT32_15720	COG4473	ABC transporter
LIT32_15735	COG0456	acetyltransferase
LIT32_15740	COG2814	Major facilitator Superfamily
LIT32_15750	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
LIT32_15760	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIT32_15765	COG1078	dGTPase activity
LIT32_15775	COG2267	carboxylic ester hydrolase activity
LIT32_15795	COG1278	Cold shock
LIT32_15805	COG0456	acetyltransferase
LIT32_15810	COG0346	lactoylglutathione lyase activity
LIT32_15815	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_15815	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_15820	COG1846	Transcriptional regulator
LIT32_15850	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIT32_15860	COG4698	Protein conserved in bacteria
LIT32_15880	COG1999	signal sequence binding
LIT32_15905	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LIT32_15910	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LIT32_15915	COG1272	protein, Hemolysin III
LIT32_15925	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LIT32_15945	COG0861	Integral membrane protein TerC family
LIT32_15950	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LIT32_15965	COG2136	Putative SAM-dependent methyltransferase
LIT32_15965	COG2521	methyltransferase
LIT32_15975	COG0129	dihydroxy-acid dehydratase activity
LIT32_15980	COG0024	Methionine aminopeptidase
LIT32_15985	COG2226	methyltransferase
LIT32_15990	COG1413	lyase activity
LIT32_15995	COG1418	mRNA catabolic process
LIT32_16000	COG1307	EDD domain protein, DegV family
LIT32_16010	COG0386	Belongs to the glutathione peroxidase family
LIT32_16025	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
LIT32_16030	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LIT32_16035	COG1988	membrane-bound metal-dependent
LIT32_16050	COG2226	methyltransferase
LIT32_16080	COG1278	Cold shock
LIT32_16110	COG0328	RNA-DNA hybrid ribonuclease activity
LIT32_16125	COG0702	epimerase
LIT32_16130	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIT32_16150	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIT32_16160	COG0475	glutathione-regulated potassium exporter activity
LIT32_16165	COG0490	domain, Protein
LIT32_16175	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LIT32_16190	COG1755	Isoprenylcysteine carboxyl methyltransferase
LIT32_16195	COG3424	synthase
LIT32_16210	COG1376	ErfK ybiS ycfS ynhG family protein
LIT32_16220	COG2233	PERMEase
LIT32_16235	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LIT32_16240	COG1199	ATP-dependent helicase activity
LIT32_16250	COG0116	Belongs to the methyltransferase superfamily
LIT32_16280	COG3359	exonuclease
LIT32_16285	COG1111	helicase
LIT32_16285	COG1205	dead DEAH box helicase
LIT32_16290	COG2190	(PTS) system
LIT32_16355	COG3331	DNA recombination
LIT32_16360	COG4499	WXG100 protein secretion system (Wss), protein YukC
LIT32_16360	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT32_16370	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LIT32_16375	COG3935	DnaD domain protein
LIT32_16380	COG0017	Asparaginyl-tRNA synthetase
LIT32_16385	COG0436	Aminotransferase
LIT32_16400	COG1199	ATP-dependent helicase activity
LIT32_16400	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LIT32_16405	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LIT32_16410	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LIT32_16415	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LIT32_16420	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
LIT32_16420	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
LIT32_16425	COG0617	tRNA 3'-terminal CCA addition
LIT32_16430	COG0438	transferase activity, transferring glycosyl groups
LIT32_16435	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LIT32_16440	COG1803	Methylglyoxal synthase
LIT32_16445	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LIT32_16450	COG1694	Mazg nucleotide pyrophosphohydrolase
LIT32_16455	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_16465	COG4347	Protein of unknown function (DUF1405)
LIT32_16470	COG2010	Cytochrome c
LIT32_16470	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LIT32_16475	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LIT32_16480	COG0723	plastoquinol--plastocyanin reductase activity
LIT32_16490	COG1874	Beta-galactosidase
LIT32_16490	COG0366	Alpha amylase catalytic
LIT32_16495	COG5582	Belongs to the UPF0302 family
LIT32_16500	COG0457	Tetratricopeptide repeat
LIT32_16520	COG0287	Prephenate dehydrogenase
LIT32_16530	COG0159	tryptophan synthase activity
LIT32_16535	COG0133	tryptophan synthase activity
LIT32_16540	COG0135	phosphoribosylanthranilate isomerase activity
LIT32_16545	COG0134	indole-3-glycerol-phosphate synthase activity
LIT32_16550	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LIT32_16555	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LIT32_16560	COG4401	Chorismate mutase type I
LIT32_16565	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LIT32_16570	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LIT32_16575	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LIT32_16580	COG0105	UTP biosynthetic process
LIT32_16585	COG0142	geranyltranstransferase activity
LIT32_16590	COG2226	methyltransferase
LIT32_16595	COG0142	geranyltranstransferase activity
LIT32_16610	COG0776	regulation of translation
LIT32_16615	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LIT32_16635	COG1160	GTP binding
LIT32_16660	COG1304	FMN binding
LIT32_16665	COG0539	negative regulation of cytoplasmic translation
LIT32_16675	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LIT32_16690	COG2959	enzyme of heme biosynthesis
LIT32_16695	COG3773	Cell wall hydrolase
LIT32_16695	COG3409	Peptidoglycan-binding domain 1 protein
LIT32_16700	COG2339	peptidase activity
LIT32_16710	COG0492	ferredoxin-NADP+ reductase activity
LIT32_16715	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LIT32_16720	COG4862	establishment of competence for transformation
LIT32_16725	COG0789	Transcriptional regulator
LIT32_16745	COG1388	LysM domain
LIT32_16750	COG1266	CAAX protease self-immunity
LIT32_16755	COG0514	ATP-dependent DNA helicase (RecQ)
LIT32_16760	COG4955	Helix-turn-helix domain
LIT32_16765	COG1141	Ferredoxin
LIT32_16770	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LIT32_16775	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LIT32_16780	COG5002	protein histidine kinase activity
LIT32_16785	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIT32_16790	COG1705	Flagellar rod assembly protein muramidase FlgJ
LIT32_16790	COG1388	LysM domain
LIT32_16800	COG1595	DNA-templated transcription, initiation
LIT32_16805	COG2096	Adenosyltransferase
LIT32_16820	COG5002	protein histidine kinase activity
LIT32_16825	COG0745	RESPONSE REGULATOR receiver
LIT32_16830	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LIT32_16835	COG1333	cytochrome c biogenesis protein
LIT32_16840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_16845	COG1187	pseudouridine synthase activity
LIT32_16850	COG0700	Nucleoside recognition
LIT32_16855	COG2715	membrane protein required for spore maturation
LIT32_16860	COG1686	Belongs to the peptidase S11 family
LIT32_16875	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LIT32_16890	COG1547	Domain of unknown function (DUF309)
LIT32_16900	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LIT32_16905	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LIT32_16905	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LIT32_16910	COG0307	riboflavin synthase, alpha
LIT32_16915	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIT32_16915	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIT32_16920	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LIT32_16925	COG4086	secreted protein
LIT32_16930	COG0019	diaminopimelate decarboxylase activity
LIT32_16935	COG0697	spore germination
LIT32_16950	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIT32_16980	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_16985	COG1686	Belongs to the peptidase S11 family
LIT32_17000	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LIT32_17005	COG4974	Belongs to the 'phage' integrase family
LIT32_17015	COG0735	belongs to the Fur family
LIT32_17020	COG1300	Membrane
LIT32_17035	COG1379	DNA repair
LIT32_17040	COG0494	nUDIX hydrolase
LIT32_17050	COG0667	Aldo Keto reductase
LIT32_17065	COG1404	Belongs to the peptidase S8 family
LIT32_17085	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LIT32_17090	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LIT32_17095	COG0183	Belongs to the thiolase family
LIT32_17100	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LIT32_17105	COG1073	alpha beta
LIT32_17130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LIT32_17140	COG0300	oxidoreductase activity
LIT32_17145	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT32_17150	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT32_17165	COG4187	Peptidase family M20/M25/M40
LIT32_17170	COG1902	pentaerythritol trinitrate reductase activity
LIT32_17190	COG1234	tRNA 3'-trailer cleavage
LIT32_17200	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LIT32_17205	COG2814	Major facilitator Superfamily
LIT32_17215	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LIT32_17220	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LIT32_17225	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_17230	COG2195	Cleaves the N-terminal amino acid of tripeptides
LIT32_17235	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LIT32_17240	COG0346	lactoylglutathione lyase activity
LIT32_17250	COG1376	ErfK ybiS ycfS ynhG family protein
LIT32_17255	COG4129	membrane
LIT32_17260	COG1126	abc transporter atp-binding protein
LIT32_17265	COG0765	amino acid transport
LIT32_17270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LIT32_17280	COG1703	isobutyryl-CoA mutase activity
LIT32_17285	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
LIT32_17285	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
LIT32_17290	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
LIT32_17295	COG1597	lipid kinase activity
LIT32_17300	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIT32_17305	COG0022	dehydrogenase e1 component
LIT32_17310	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LIT32_17315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIT32_17320	COG3426	butyrate kinase activity
LIT32_17330	COG0280	phosphate acetyltransferase
LIT32_17335	COG3290	protein histidine kinase activity
LIT32_17335	COG3829	transcription factor binding
LIT32_17345	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_17350	COG3093	addiction module antidote protein HigA
LIT32_17355	COG3773	Cell wall hydrolase
LIT32_17370	COG0745	RESPONSE REGULATOR receiver
LIT32_17375	COG0750	zinc metalloprotease
LIT32_17380	COG0497	DNA recombination
LIT32_17385	COG1438	arginine binding
LIT32_17390	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
LIT32_17395	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LIT32_17400	COG0142	geranyltranstransferase activity
LIT32_17405	COG1722	exodeoxyribonuclease VII activity
LIT32_17410	COG1570	exodeoxyribonuclease VII activity
LIT32_17415	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LIT32_17420	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LIT32_17425	COG1302	Protein conserved in bacteria
LIT32_17430	COG0439	Biotin carboxylase
LIT32_17435	COG0511	ligase activity, forming carbon-carbon bonds
LIT32_17475	COG3854	ATPases associated with a variety of cellular activities
LIT32_17490	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LIT32_17495	COG0006	proline dipeptidase activity
LIT32_17500	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LIT32_17510	COG3872	metal-dependent enzyme
LIT32_17520	COG1752	Esterase of the alpha-beta hydrolase superfamily
LIT32_17530	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIT32_17535	COG0095	Lipoate-protein ligase
LIT32_17540	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT32_17545	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LIT32_17550	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LIT32_17555	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LIT32_17560	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIT32_17620	COG4940	Competence protein ComGF
LIT32_17630	COG4970	Tfp pilus assembly protein FimT
LIT32_17635	COG4537	Required for transformation and DNA binding
LIT32_17640	COG1459	type II secretion system
LIT32_17645	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LIT32_17660	COG1393	Belongs to the ArsC family
LIT32_17675	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT32_17690	COG0011	TIGRFAM Protein of
LIT32_17705	COG1368	sulfuric ester hydrolase activity
LIT32_17710	COG1940	carbohydrate kinase activity
LIT32_17715	COG4483	Protein conserved in bacteria
LIT32_17720	COG0457	Tetratricopeptide repeat
LIT32_17720	COG0705	Rhomboid family
LIT32_17735	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LIT32_17745	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LIT32_17765	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LIT32_17770	COG0704	Plays a role in the regulation of phosphate uptake
LIT32_17780	COG0581	inorganic phosphate transmembrane transporter activity
LIT32_17785	COG0573	inorganic phosphate transmembrane transporter activity
LIT32_17795	COG0768	penicillin binding
LIT32_17800	COG0477	Major facilitator Superfamily
LIT32_17810	COG2839	Protein conserved in bacteria
LIT32_17815	COG0704	Plays a role in the regulation of phosphate uptake
LIT32_17820	COG5521	maltodextrose utilization protein MalA
LIT32_17825	COG0840	transmembrane signaling receptor activity
LIT32_17830	COG1388	LysM domain
LIT32_17840	COG4709	membrane
LIT32_17845	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
LIT32_17850	COG0735	belongs to the Fur family
LIT32_17855	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LIT32_17860	COG1121	(ABC) transporter
LIT32_17865	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_17875	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LIT32_17880	COG0513	Belongs to the DEAD box helicase family
LIT32_17890	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LIT32_17895	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LIT32_17900	COG2384	SAM-dependent methyltransferase
LIT32_17905	COG2010	Cytochrome c
LIT32_17910	COG1960	acyl-CoA dehydrogenase activity
LIT32_17915	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LIT32_17920	COG0358	DNA primase activity
LIT32_17925	COG1671	Belongs to the UPF0178 family
LIT32_17930	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LIT32_17935	COG0517	IMP dehydrogenase activity
LIT32_17940	COG0751	glycine-tRNA ligase activity
LIT32_17945	COG0752	glycyl-tRNA synthetase alpha subunit
LIT32_17950	COG1381	Involved in DNA repair and RecF pathway recombination
LIT32_17960	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LIT32_17965	COG0295	cytidine deaminase activity
LIT32_17970	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LIT32_17980	COG1480	7TM receptor with intracellular HD hydrolase
LIT32_17985	COG1702	phosphate starvation-inducible protein PhoH
LIT32_18055	COG4864	UPF0365 protein
LIT32_18060	COG1030	water channel activity
LIT32_18070	COG1610	YqeY-like protein
LIT32_18075	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LIT32_18080	COG1283	sodium-dependent phosphate transmembrane transporter activity
LIT32_18085	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LIT32_18090	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LIT32_18095	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LIT32_18100	COG2264	protein methyltransferase activity
LIT32_18105	COG0484	heat shock protein binding
LIT32_18110	COG0443	Heat shock 70 kDa protein
LIT32_18115	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LIT32_18125	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LIT32_18130	COG0481	GTPase activity
LIT32_18145	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT32_18155	COG0268	Binds directly to 16S ribosomal RNA
LIT32_18160	COG1466	dna polymerase III delta subunit
LIT32_18170	COG0658	competence protein
LIT32_18170	COG2333	competence protein COMEC
LIT32_18175	COG2131	deaminase
LIT32_18180	COG1555	photosystem II stabilization
LIT32_18180	COG1596	polysaccharide export
LIT32_18185	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LIT32_18190	COG3655	Transcriptional regulator
LIT32_18200	COG2226	methyltransferase
LIT32_18205	COG0799	negative regulation of ribosome biogenesis
LIT32_18210	COG1713	HD superfamily hydrolase involved in NAD metabolism
LIT32_18215	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LIT32_18220	COG1534	Rna-binding protein
LIT32_18230	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LIT32_18235	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
LIT32_18245	COG0688	phosphatidylethanolamine metabolic process
LIT32_18250	COG1183	phosphatidylcholine synthase activity
LIT32_18270	COG2755	lipolytic protein G-D-S-L family
LIT32_18280	COG0626	cystathionine gamma-synthase activity
LIT32_18285	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIT32_18290	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LIT32_18295	COG2226	methyltransferase
LIT32_18310	COG0768	penicillin binding
LIT32_18315	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LIT32_18320	COG0572	uridine kinase
LIT32_18325	COG0826	peptidase U32
LIT32_18330	COG0826	peptidase U32
LIT32_18335	COG4122	O-methyltransferase activity
LIT32_18340	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LIT32_18345	COG3906	Belongs to the UPF0473 family
LIT32_18350	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LIT32_18355	COG4472	Bacterial protein of unknown function (DUF965)
LIT32_18360	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LIT32_18365	COG0628	permease
LIT32_18380	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LIT32_18395	COG1104	cysteine desulfurase activity
LIT32_18400	COG1959	2 iron, 2 sulfur cluster binding
LIT32_18405	COG2364	Membrane
LIT32_18410	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LIT32_18415	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LIT32_18425	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LIT32_18430	COG0124	histidyl-tRNA synthetase
LIT32_18440	COG3103	Sh3 type 3 domain protein
LIT32_18440	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT32_18440	COG4991	sh3 domain protein
LIT32_18445	COG1490	D-aminoacyl-tRNA deacylase activity
LIT32_18450	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LIT32_18460	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LIT32_18460	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LIT32_18465	COG5416	Lipopolysaccharide assembly protein A domain
LIT32_18470	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LIT32_18470	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LIT32_18480	COG2244	polysaccharide biosynthetic process
LIT32_18485	COG2323	membrane
LIT32_18495	COG1862	Preprotein translocase
LIT32_18500	COG0343	queuine tRNA-ribosyltransferase activity
LIT32_18505	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LIT32_18515	COG2255	four-way junction helicase activity
LIT32_18520	COG0632	four-way junction helicase activity
LIT32_18550	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LIT32_18555	COG0157	Belongs to the NadC ModD family
LIT32_18560	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LIT32_18565	COG1104	cysteine desulfurase activity
LIT32_18570	COG1827	regulation of RNA biosynthetic process
LIT32_18575	COG0077	Prephenate dehydratase
LIT32_18580	COG4492	Belongs to the UPF0735 family
LIT32_18590	COG3290	protein histidine kinase activity
LIT32_18600	COG2868	ribosomal protein
LIT32_18605	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LIT32_18615	COG1994	Peptidase M50
LIT32_18620	COG0739	heme binding
LIT32_18625	COG2894	cell division
LIT32_18630	COG0850	regulation of cytokinetic process
LIT32_18635	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LIT32_18645	COG1077	Cell shape determining protein MreB Mrl
LIT32_18650	COG2003	Belongs to the UPF0758 family
LIT32_18665	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LIT32_18680	COG3706	GGDEF domain
LIT32_18685	COG0285	dihydrofolate synthase activity
LIT32_18690	COG0525	valine-tRNA ligase activity
LIT32_18700	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIT32_18705	COG1388	LysM domain
LIT32_18705	COG1388	LysM domain
LIT32_18725	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LIT32_18730	COG0113	porphobilinogen synthase activity
LIT32_18740	COG0181	hydroxymethylbilane synthase activity
LIT32_18745	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LIT32_18765	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LIT32_18770	COG0470	DNA polymerase III
LIT32_18770	COG1067	ATP-dependent peptidase activity
LIT32_18775	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LIT32_18780	COG0544	peptidyl-prolyl cis-trans isomerase activity
LIT32_18785	COG0457	Tetratricopeptide repeat
LIT32_18785	COG1477	protein flavinylation
LIT32_18790	COG0066	3-isopropylmalate dehydratase activity
LIT32_18795	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LIT32_18800	COG0473	3-isopropylmalate dehydrogenase activity
LIT32_18805	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LIT32_18810	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LIT32_18815	COG0440	acetolactate synthase activity
LIT32_18820	COG0028	Belongs to the TPP enzyme family
LIT32_18825	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LIT32_18835	COG0622	Phosphoesterase
LIT32_18840	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LIT32_18845	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LIT32_18850	COG5401	PFAM Sporulation and spore germination
LIT32_18860	COG1846	Transcriptional regulator
LIT32_18865	COG2197	response regulator
LIT32_18870	COG0824	Thioesterase
LIT32_18875	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LIT32_18880	COG1053	succinate dehydrogenase
LIT32_18885	COG2009	succinate dehydrogenase
LIT32_18890	COG1719	4-vinyl reductase, 4VR
LIT32_18895	COG0527	aspartate kinase activity
LIT32_18900	COG0322	excinuclease ABC activity
LIT32_18905	COG3118	belongs to the thioredoxin family
LIT32_18910	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
LIT32_18915	COG2086	electron transfer activity
LIT32_18920	COG1024	Enoyl-CoA hydratase
LIT32_18925	COG1309	transcriptional regulator
LIT32_18930	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_18935	COG3766	membrane
LIT32_18940	COG1193	negative regulation of DNA recombination
LIT32_18945	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIT32_18945	COG1796	DNA polymerase
LIT32_18950	COG1286	toxin biosynthetic process
LIT32_18955	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LIT32_18960	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LIT32_18965	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LIT32_18975	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LIT32_18980	COG0072	phenylalanine-tRNA ligase activity
LIT32_18980	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIT32_18985	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LIT32_18990	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIT32_19000	COG1363	Peptidase, m42
LIT32_19020	COG3326	Membrane
LIT32_19025	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LIT32_19035	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LIT32_19040	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIT32_19050	COG1484	DNA-dependent DNA replication
LIT32_19055	COG3611	Membrane attachment protein
LIT32_19060	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LIT32_19070	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LIT32_19075	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LIT32_19080	COG0237	dephospho-CoA kinase activity
LIT32_19085	COG1971	Probably functions as a manganese efflux pump
LIT32_19090	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LIT32_19095	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIT32_19095	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIT32_19100	COG0330	HflC and HflK could
LIT32_19105	COG0330	HflC and HflK could
LIT32_19110	COG5002	protein histidine kinase activity
LIT32_19115	COG0745	RESPONSE REGULATOR receiver
LIT32_19125	COG0039	L-malate dehydrogenase activity
LIT32_19130	COG0538	isocitrate dehydrogenase activity
LIT32_19135	COG0372	Belongs to the citrate synthase family
LIT32_19145	COG0628	permease
LIT32_19150	COG3030	protein affecting phage T7 exclusion by the F plasmid
LIT32_19165	COG0825	malonyl-CoA metabolic process
LIT32_19170	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LIT32_19175	COG1725	Transcriptional regulator
LIT32_19180	COG0281	malic enzyme
LIT32_19185	COG0587	DNA-directed DNA polymerase activity
LIT32_19205	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LIT32_19215	COG4109	DRTGG domain
LIT32_19225	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LIT32_19235	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LIT32_19275	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_19295	COG0165	Argininosuccinate lyase
LIT32_19300	COG0137	argininosuccinate synthase activity
LIT32_19320	COG1757	Na H antiporter
LIT32_19325	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LIT32_19330	COG0827	DNA restriction-modification system
LIT32_19335	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LIT32_19340	COG3874	Sporulation protein YtfJ
LIT32_19350	COG1714	RDD family
LIT32_19355	COG0616	signal peptide processing
LIT32_19360	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LIT32_19365	COG1574	metal-dependent hydrolase with the TIM-barrel fold
LIT32_19370	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIT32_19385	COG0301	tRNA thio-modification
LIT32_19390	COG1104	cysteine desulfurase activity
LIT32_19395	COG1114	Component of the transport system for branched-chain amino acids
LIT32_19400	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LIT32_19405	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIT32_19410	COG1309	transcriptional regulator
LIT32_19415	COG1956	GAF domain-containing protein
LIT32_19420	COG0626	cystathionine gamma-synthase activity
LIT32_19425	COG2199	diguanylate cyclase activity
LIT32_19425	COG2203	Gaf domain
LIT32_19430	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LIT32_19435	COG2801	Transposase and inactivated derivatives
LIT32_19470	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIT32_19475	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LIT32_19480	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LIT32_19485	COG3457	Alanine racemase
LIT32_19490	COG0626	cystathionine gamma-synthase activity
LIT32_19495	COG1735	metal-dependent hydrolase with the TIM-barrel fold
LIT32_19515	COG2188	Transcriptional regulator
LIT32_19530	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LIT32_19535	COG0454	-acetyltransferase
LIT32_19540	COG0517	IMP dehydrogenase activity
LIT32_19545	COG0123	including yeast histone deacetylase and acetoin utilization protein
LIT32_19550	COG1609	Transcriptional regulator
LIT32_19555	COG1605	Chorismate mutase
LIT32_19555	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LIT32_19560	COG0849	cell division
LIT32_19570	COG3118	belongs to the thioredoxin family
LIT32_19575	COG4980	gas vesicle protein
LIT32_19580	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LIT32_19585	COG2309	aminopeptidase activity
LIT32_19590	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LIT32_19595	COG1674	ftsk spoiiie
LIT32_19600	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIT32_19605	COG4848	Belongs to the UPF0354 family
LIT32_19610	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_19625	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LIT32_19630	COG1363	Peptidase, m42
LIT32_19635	COG5584	Small secreted protein
LIT32_19640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT32_19645	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LIT32_19655	COG0510	thiamine kinase activity
LIT32_19660	COG1523	belongs to the glycosyl hydrolase 13 family
LIT32_19665	COG1597	lipid kinase activity
LIT32_19675	COG1346	cytolysis
LIT32_19680	COG1380	Effector of murein hydrolase LrgA
LIT32_19685	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LIT32_19690	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LIT32_19700	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT32_19705	COG2252	PERMEase
LIT32_19710	COG1349	DNA-binding transcription factor activity
LIT32_19715	COG1187	pseudouridine synthase activity
LIT32_19720	COG2244	polysaccharide biosynthetic process
LIT32_19725	COG2081	HI0933 family
LIT32_19740	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIT32_19745	COG0495	leucyl-tRNA aminoacylation
LIT32_19760	COG2814	Major facilitator Superfamily
LIT32_19770	COG0577	efflux transmembrane transporter activity
LIT32_19775	COG1136	(ABC) transporter
LIT32_19785	COG1131	(ABC) transporter
LIT32_19790	COG1725	Transcriptional regulator
LIT32_19805	COG1242	4 iron, 4 sulfur cluster binding
LIT32_19810	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LIT32_19820	COG2267	carboxylic ester hydrolase activity
LIT32_19825	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LIT32_19830	COG0671	phosphoesterase, PA-phosphatase related
LIT32_19835	COG0438	transferase activity, transferring glycosyl groups
LIT32_19840	COG0367	asparagine synthase
LIT32_19845	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LIT32_19850	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LIT32_19855	COG5566	PFAM Mor transcription activator
LIT32_19875	COG1506	peptidase
LIT32_19880	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIT32_19885	COG1116	anion transmembrane transporter activity
LIT32_19890	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIT32_19895	COG1404	Belongs to the peptidase S8 family
LIT32_19905	COG0494	nUDIX hydrolase
LIT32_19920	COG0783	Belongs to the Dps family
LIT32_19940	COG0701	Predicted permease
LIT32_19945	COG1469	GTP cyclohydrolase I activity
LIT32_19950	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LIT32_19965	COG0788	formyltetrahydrofolate deformylase activity
LIT32_19970	COG0534	Mate efflux family protein
LIT32_19980	COG0444	Belongs to the ABC transporter superfamily
LIT32_19990	COG0601	transmembrane transport
LIT32_19995	COG0747	negative chemotaxis
LIT32_20020	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LIT32_20025	COG0288	reversible hydration of carbon dioxide
LIT32_20030	COG0523	cobalamin synthesis protein
LIT32_20040	COG0523	cobalamin synthesis protein
LIT32_20050	COG1271	oxidase subunit
LIT32_20055	COG1294	oxidase, subunit
LIT32_20065	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LIT32_20070	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LIT32_20070	COG1321	iron dependent repressor
LIT32_20075	COG1121	(ABC) transporter
LIT32_20080	COG0803	Belongs to the bacterial solute-binding protein 9 family
LIT32_20085	COG4948	Mandelate Racemase Muconate Lactonizing
LIT32_20095	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LIT32_20100	COG0596	Alpha beta hydrolase
LIT32_20105	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LIT32_20110	COG1169	isochorismate synthase
LIT32_20115	COG1575	Belongs to the MenA family. Type 1 subfamily
LIT32_20120	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LIT32_20135	COG0058	SHG alpha-glucan phosphorylase activity
LIT32_20140	COG0297	glycogen (starch) synthase activity
LIT32_20145	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LIT32_20150	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LIT32_20280	COG1116	anion transmembrane transporter activity
LIT32_20285	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LIT32_20290	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LIT32_20300	COG3859	Proton-coupled thiamine transporter YuaJ
LIT32_20315	COG1247	-acetyltransferase
LIT32_20330	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_20335	COG2318	DinB family
LIT32_20355	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_20365	COG3243	poly(R)-hydroxyalkanoic acid synthase
LIT32_20375	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIT32_20380	COG1122	ATPase activity
LIT32_20385	COG4721	ABC-type cobalt transport system, permease component
LIT32_20390	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LIT32_20395	COG1737	Transcriptional regulator
LIT32_20400	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_20400	COG1263	PTS System
LIT32_20405	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LIT32_20410	COG0251	oxidation-reduction process
LIT32_20415	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LIT32_20450	COG1288	antiporter activity
LIT32_20455	COG1473	amidohydrolase
LIT32_20460	COG0583	DNA-binding transcription factor activity
LIT32_20485	COG0673	inositol 2-dehydrogenase activity
LIT32_20495	COG0395	ABC-type sugar transport system, permease component
LIT32_20500	COG1175	transmembrane transport
LIT32_20505	COG1653	transport
LIT32_20510	COG0673	inositol 2-dehydrogenase activity
LIT32_20515	COG0673	inositol 2-dehydrogenase activity
LIT32_20520	COG0673	inositol 2-dehydrogenase activity
LIT32_20530	COG1940	carbohydrate kinase activity
LIT32_20550	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT32_20555	COG1621	beta-fructofuranosidase activity
LIT32_20565	COG0395	ABC-type sugar transport system, permease component
LIT32_20570	COG4209	transmembrane transport
LIT32_20585	COG4753	response regulator
LIT32_20585	COG2207	Transcriptional regulator
LIT32_20590	COG3275	phosphorelay sensor kinase activity
LIT32_20610	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LIT32_20635	COG4948	Mandelate Racemase Muconate Lactonizing
LIT32_20645	COG1473	amidohydrolase
LIT32_20650	COG1737	Transcriptional regulator
LIT32_20655	COG1388	LysM domain
LIT32_20655	COG3584	3D domain protein
LIT32_20660	COG1404	Belongs to the peptidase S8 family
LIT32_20670	COG1609	Transcriptional regulator
LIT32_20675	COG1653	transport
LIT32_20680	COG1175	transmembrane transport
LIT32_20685	COG0395	ABC-type sugar transport system, permease component
LIT32_20690	COG1486	melibiose metabolic process
LIT32_20695	COG0730	response to heat
LIT32_20700	COG4129	membrane
LIT32_20705	COG5002	protein histidine kinase activity
LIT32_20715	COG0492	ferredoxin-NADP+ reductase activity
LIT32_20720	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LIT32_20740	COG0402	S-adenosylhomocysteine deaminase activity
LIT32_20750	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIT32_20755	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LIT32_20760	COG1447	Phosphotransferase system cellobiose-specific component IIA
LIT32_20765	COG1486	melibiose metabolic process
LIT32_20780	COG2259	Doxx family
LIT32_20795	COG2176	DNA-directed DNA polymerase activity
LIT32_20800	COG2132	Multicopper oxidase
LIT32_20810	COG2207	Transcriptional regulator
LIT32_20810	COG3708	Transcriptional regulator
LIT32_20815	COG1247	-acetyltransferase
LIT32_20825	COG0833	amino acid
LIT32_20845	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LIT32_20855	COG0697	spore germination
LIT32_20865	COG1113	amino acid transport
LIT32_20870	COG3540	Alkaline phosphatase
LIT32_20890	COG2814	Major facilitator Superfamily
LIT32_20895	COG0583	DNA-binding transcription factor activity
LIT32_20900	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_20910	COG1366	Belongs to the anti-sigma-factor antagonist family
LIT32_20920	COG5002	protein histidine kinase activity
LIT32_20930	COG0805	protein transport
LIT32_20935	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_20970	COG0673	inositol 2-dehydrogenase activity
LIT32_20975	COG1285	pathogenesis
LIT32_20980	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LIT32_20985	COG1309	transcriptional regulator
LIT32_20990	COG2112	serine threonine protein kinase
LIT32_21005	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_21005	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_21005	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LIT32_21010	COG1105	Belongs to the carbohydrate kinase PfkB family
LIT32_21015	COG1349	DNA-binding transcription factor activity
LIT32_21020	COG1132	(ABC) transporter
LIT32_21035	COG1823	symporter activity
LIT32_21050	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
LIT32_21055	COG3844	kynureninase activity
LIT32_21060	COG2070	2-Nitropropane dioxygenase
LIT32_21070	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LIT32_21075	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LIT32_21080	COG0432	Pfam Uncharacterised protein family UPF0047
LIT32_21085	COG0366	Alpha amylase catalytic
LIT32_21095	COG1253	flavin adenine dinucleotide binding
LIT32_21110	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LIT32_21120	COG1683	Conserved Protein
LIT32_21145	COG1979	alcohol dehydrogenase
LIT32_21150	COG2155	Conserved Protein
LIT32_21155	COG1098	S1 RNA binding domain
LIT32_21170	COG0436	Aminotransferase
LIT32_21175	COG1522	sequence-specific DNA binding
LIT32_21180	COG2267	carboxylic ester hydrolase activity
LIT32_21190	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LIT32_21195	COG2205	protein histidine kinase activity
LIT32_21220	COG5018	Exonuclease
LIT32_21225	COG2814	Major facilitator Superfamily
LIT32_21230	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT32_21235	COG3011	Protein conserved in bacteria
LIT32_21250	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LIT32_21250	COG2111	Na H antiporter
LIT32_21255	COG2111	Na H antiporter
LIT32_21260	COG1006	Multisubunit Na H antiporter MnhC subunit
LIT32_21265	COG0651	ATP synthesis coupled electron transport
LIT32_21270	COG1863	multisubunit Na H antiporter MnhE subunit
LIT32_21275	COG2212	antiporter activity
LIT32_21280	COG1320	monovalent cation:proton antiporter activity
LIT32_21290	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_21295	COG2050	protein possibly involved in aromatic compounds catabolism
LIT32_21300	COG2133	pyrroloquinoline quinone binding
LIT32_21310	COG2197	response regulator
LIT32_21315	COG4585	Histidine kinase
LIT32_21325	COG0142	geranyltranstransferase activity
LIT32_21345	COG0840	transmembrane signaling receptor activity
LIT32_21350	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LIT32_21355	COG2910	NAD(P)H-binding
LIT32_21360	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LIT32_21365	COG1959	2 iron, 2 sulfur cluster binding
LIT32_21370	COG4989	oxidoreductase activity
LIT32_21395	COG5506	Protein of unknown function (DUF1694)
LIT32_21405	COG2368	4-hydroxyphenylacetate
LIT32_21410	COG0243	molybdopterin cofactor binding
LIT32_21415	COG1609	Transcriptional regulator
LIT32_21425	COG0628	permease
LIT32_21430	COG1253	flavin adenine dinucleotide binding
LIT32_21435	COG0789	Transcriptional regulator
LIT32_21440	COG1070	Carbohydrate kinase
LIT32_21465	COG1501	Belongs to the glycosyl hydrolase 31 family
LIT32_21475	COG1418	mRNA catabolic process
LIT32_21495	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_21500	COG0737	Belongs to the 5'-nucleotidase family
LIT32_21505	COG2508	Transcriptional regulator
LIT32_21505	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LIT32_21510	COG0686	Belongs to the AlaDH PNT family
LIT32_21515	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LIT32_21520	COG0697	spore germination
LIT32_21525	COG5002	protein histidine kinase activity
LIT32_21530	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LIT32_21535	COG1268	BioY protein
LIT32_21550	COG2056	Na+-H+ antiporter family
LIT32_21555	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LIT32_21565	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
LIT32_21575	COG3584	3D domain protein
LIT32_21595	COG1252	NADH dehydrogenase
LIT32_21600	COG0492	ferredoxin-NADP+ reductase activity
LIT32_21615	COG0316	Belongs to the HesB IscA family
LIT32_21620	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LIT32_21635	COG1252	NADH dehydrogenase
LIT32_21640	COG4837	Protein of unknown function (DUF1462)
LIT32_21645	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LIT32_21650	COG0823	Involved in the tonB-independent uptake of proteins
LIT32_21650	COG1506	peptidase
LIT32_21650	COG4946	Tricorn protease homolog
LIT32_21655	COG0083	homoserine kinase activity
LIT32_21660	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LIT32_21665	COG0460	homoserine dehydrogenase
LIT32_21675	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIT32_21680	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LIT32_21685	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LIT32_21690	COG0647	UMP catabolic process
LIT32_21695	COG2445	Protein of unknown function DUF86
LIT32_21710	COG4470	Protein conserved in bacteria
LIT32_21725	COG0739	heme binding
LIT32_21735	COG3377	Domain of unknown function (DUF1805)
LIT32_21740	COG0737	Belongs to the 5'-nucleotidase family
LIT32_21745	COG0730	response to heat
LIT32_21750	COG1801	Protein of unknown function DUF72
LIT32_21755	COG1404	Belongs to the peptidase S8 family
LIT32_21755	COG4412	M6 family metalloprotease domain protein
LIT32_21765	COG1846	Transcriptional regulator
LIT32_21780	COG1876	peptidase activity
LIT32_21790	COG0719	Fe-S assembly protein
LIT32_21795	COG0822	iron-sulfur transferase activity
LIT32_21800	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LIT32_21805	COG0719	Fe-S assembly protein
LIT32_21810	COG0396	ATPase activity
LIT32_21815	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LIT32_21820	COG1464	Belongs to the NlpA lipoprotein family
LIT32_21825	COG2011	ABC-type metal ion transport system permease component
LIT32_21830	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIT32_21835	COG2873	o-acetylhomoserine
LIT32_21845	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_21850	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LIT32_21860	COG0509	glycine decarboxylation via glycine cleavage system
LIT32_21865	COG1393	Belongs to the ArsC family
LIT32_21870	COG1960	acyl-CoA dehydrogenase activity
LIT32_21875	COG0183	Belongs to the thiolase family
LIT32_21880	COG1024	Enoyl-CoA hydratase
LIT32_21880	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT32_21900	COG5577	PFAM Coat F domain
LIT32_21905	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
LIT32_21930	COG1120	ATPase activity
LIT32_21935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT32_21940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT32_21945	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LIT32_21950	COG1960	acyl-CoA dehydrogenase activity
LIT32_21960	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LIT32_21965	COG0569	domain protein
LIT32_21970	COG1301	dicarboxylic acid transport
LIT32_21985	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_21990	COG0531	amino acid
LIT32_22000	COG2205	protein histidine kinase activity
LIT32_22010	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LIT32_22030	COG0531	amino acid
LIT32_22035	COG1686	Belongs to the peptidase S11 family
LIT32_22045	COG2076	Multidrug Resistance protein
LIT32_22050	COG2076	Multidrug Resistance protein
LIT32_22065	COG1595	DNA-templated transcription, initiation
LIT32_22070	COG1609	Transcriptional regulator
LIT32_22080	COG4209	transmembrane transport
LIT32_22085	COG0395	ABC-type sugar transport system, permease component
LIT32_22090	COG1653	transport
LIT32_22095	COG5578	integral membrane protein
LIT32_22105	COG2222	sugar isomerase
LIT32_22115	COG1105	Belongs to the carbohydrate kinase PfkB family
LIT32_22120	COG1940	carbohydrate kinase activity
LIT32_22125	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_22135	COG1464	Belongs to the NlpA lipoprotein family
LIT32_22140	COG2011	ABC-type metal ion transport system permease component
LIT32_22145	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIT32_22170	COG0561	phosphatase activity
LIT32_22180	COG3842	ATPase activity
LIT32_22205	COG3290	protein histidine kinase activity
LIT32_22210	COG4565	transcriptional regulatory protein
LIT32_22215	COG0534	Mate efflux family protein
LIT32_22220	COG4608	Belongs to the ABC transporter superfamily
LIT32_22225	COG0444	Belongs to the ABC transporter superfamily
LIT32_22230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_22235	COG0601	transmembrane transport
LIT32_22240	COG0747	negative chemotaxis
LIT32_22245	COG2851	Citrate transporter
LIT32_22250	COG0010	Belongs to the arginase family
LIT32_22255	COG1228	amidohydrolase
LIT32_22260	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LIT32_22265	COG2986	histidine ammonia-lyase
LIT32_22275	COG1966	Carbon starvation protein
LIT32_22285	COG3275	phosphorelay sensor kinase activity
LIT32_22290	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LIT32_22295	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIT32_22300	COG0745	RESPONSE REGULATOR receiver
LIT32_22305	COG2205	protein histidine kinase activity
LIT32_22305	COG2770	Histidine kinase
LIT32_22315	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LIT32_22320	COG0318	PFAM AMP-dependent synthetase and ligase
LIT32_22325	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_22340	COG0114	fumarate hydratase activity
LIT32_22360	COG5002	protein histidine kinase activity
LIT32_22370	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LIT32_22375	COG0446	pyridine nucleotide-disulphide oxidoreductase
LIT32_22385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_22390	COG0598	Magnesium transport protein CorA
LIT32_22395	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LIT32_22400	COG1131	(ABC) transporter
LIT32_22405	COG0741	lytic transglycosylase activity
LIT32_22415	COG0205	6-phosphofructokinase activity
LIT32_22420	COG1070	Carbohydrate kinase
LIT32_22425	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LIT32_22445	COG1846	Transcriptional regulator
LIT32_22450	COG2814	Major facilitator Superfamily
LIT32_22460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_22480	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIT32_22485	COG1733	regulation of RNA biosynthetic process
LIT32_22515	COG1476	TRANSCRIPTIONal
LIT32_22540	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_22555	COG3338	carbonate dehydratase activity
LIT32_22575	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_22600	COG0395	ABC-type sugar transport system, permease component
LIT32_22610	COG1653	transport
LIT32_22620	COG1609	Transcriptional regulator
LIT32_22630	COG1597	lipid kinase activity
LIT32_22635	COG2176	DNA-directed DNA polymerase activity
LIT32_22645	COG0004	ammonium transporteR
LIT32_22650	COG0039	L-malate dehydrogenase activity
LIT32_22665	COG0640	Transcriptional regulator
LIT32_22685	COG0753	catalase activity
LIT32_22695	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LIT32_22700	COG1131	(ABC) transporter
LIT32_22725	COG1349	DNA-binding transcription factor activity
LIT32_22740	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_22790	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LIT32_22795	COG0557	exoribonuclease II activity
LIT32_22800	COG1647	Serine aminopeptidase, S33
LIT32_22805	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LIT32_22810	COG0697	spore germination
LIT32_22830	COG0148	phosphopyruvate hydratase activity
LIT32_22850	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LIT32_22855	COG2390	Transcriptional regulator
LIT32_22865	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LIT32_22890	COG0740	serine-type endopeptidase activity
LIT32_22895	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LIT32_22900	COG1481	regulation of sporulation
LIT32_22905	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LIT32_22910	COG1660	Displays ATPase and GTPase activities
LIT32_22915	COG1051	belongs to the nudix hydrolase family
LIT32_22920	COG0492	ferredoxin-NADP+ reductase activity
LIT32_22925	COG0457	Tetratricopeptide repeat
LIT32_22930	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LIT32_22930	COG0140	phosphoribosyl-ATP diphosphatase activity
LIT32_22935	COG0107	imidazoleglycerol-phosphate synthase activity
LIT32_22940	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LIT32_22945	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LIT32_22950	COG0131	Imidazoleglycerol-phosphate dehydratase
LIT32_22955	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LIT32_22960	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LIT32_22965	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LIT32_22970	COG0110	maltose O-acetyltransferase activity
LIT32_22975	COG0546	phosphoglycolate phosphatase activity
LIT32_22980	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LIT32_22985	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LIT32_23000	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LIT32_23005	COG1970	mechanosensitive ion channel activity
LIT32_23010	COG1950	PFAM Membrane protein of
LIT32_23020	COG3595	metallopeptidase activity
LIT32_23030	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LIT32_23035	COG0556	nucleotide-excision repair
LIT32_23040	COG4897	Protein conserved in bacteria
LIT32_23045	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LIT32_23050	COG5002	protein histidine kinase activity
LIT32_23050	COG3850	Histidine kinase
LIT32_23055	COG0745	RESPONSE REGULATOR receiver
LIT32_23060	COG0577	efflux transmembrane transporter activity
LIT32_23065	COG1136	(ABC) transporter
LIT32_23070	COG1473	amidohydrolase
LIT32_23075	COG1473	amidohydrolase
LIT32_23085	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_23090	COG0601	transmembrane transport
LIT32_23095	COG4608	Belongs to the ABC transporter superfamily
LIT32_23100	COG0444	Belongs to the ABC transporter superfamily
LIT32_23105	COG1473	amidohydrolase
LIT32_23110	COG4607	ABC-type enterochelin transport system periplasmic component
LIT32_23115	COG4604	ABC transporter, ATP-binding protein
LIT32_23120	COG4605	iron ion homeostasis
LIT32_23125	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIT32_23130	COG1846	Transcriptional regulator
LIT32_23140	COG0109	protoheme IX farnesyltransferase activity
LIT32_23155	COG0789	Transcriptional regulator
LIT32_23160	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIT32_23170	COG0793	Belongs to the peptidase S41A family
LIT32_23170	COG3409	Peptidoglycan-binding domain 1 protein
LIT32_23175	COG0739	heme binding
LIT32_23180	COG2177	Part of the ABC transporter FtsEX involved in
LIT32_23185	COG2884	Cell division ATP-binding protein ftsE
LIT32_23190	COG2010	Cytochrome c
LIT32_23190	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LIT32_23195	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_23205	COG0653	protein targeting
LIT32_23215	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LIT32_23230	COG1516	flagellar protein fliS
LIT32_23235	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LIT32_23240	COG1334	flagellar protein FlaG
LIT32_23245	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIT32_23250	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LIT32_23255	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
LIT32_23265	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LIT32_23270	COG1256	bacterial-type flagellum assembly
LIT32_23270	COG4786	Flagellar basal body rod
LIT32_23275	COG3418	PFAM FlgN family protein
LIT32_23280	COG2747	anti-sigma28 factor FlgM
LIT32_23290	COG1040	competence protein
LIT32_23300	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LIT32_23310	COG1307	EDD domain protein, DegV family
LIT32_23315	COG2197	response regulator
LIT32_23320	COG4585	Histidine kinase
LIT32_23325	COG1739	Uncharacterized protein family UPF0029
LIT32_23330	COG1316	TRANSCRIPTIONal
LIT32_23335	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LIT32_23350	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LIT32_23355	COG0438	transferase activity, transferring glycosyl groups
LIT32_23360	COG1388	LysM domain
LIT32_23360	COG1134	teichoic acid transport
LIT32_23365	COG1682	transport, permease protein
LIT32_23370	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LIT32_23385	COG1216	Glycosyl transferase, family 2
LIT32_23395	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT32_23400	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LIT32_23405	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIT32_23410	COG2385	sporulation resulting in formation of a cellular spore
LIT32_23410	COG2247	cell wall binding repeat
LIT32_23420	COG4991	sh3 domain protein
LIT32_23420	COG3103	Sh3 type 3 domain protein
LIT32_23420	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT32_23430	COG2385	sporulation resulting in formation of a cellular spore
LIT32_23430	COG2247	cell wall binding repeat
LIT32_23440	COG0791	NLP P60 protein
LIT32_23440	COG1388	LysM domain
LIT32_23450	COG1316	TRANSCRIPTIONal
LIT32_23455	COG0653	protein targeting
LIT32_23480	COG3618	amidohydrolase
LIT32_23485	COG4154	Belongs to the RbsD FucU family
LIT32_23490	COG0179	Fumarylacetoacetate (FAA) hydrolase
LIT32_23495	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_23500	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_23510	COG2721	sulfolactate sulfo-lyase activity
LIT32_23525	COG0673	inositol 2-dehydrogenase activity
LIT32_23540	COG0395	ABC-type sugar transport system, permease component
LIT32_23545	COG4209	transmembrane transport
LIT32_23550	COG5578	integral membrane protein
LIT32_23555	COG1917	Cupin 2, conserved barrel domain protein
LIT32_23555	COG2207	Transcriptional regulator
LIT32_23560	COG1874	Beta-galactosidase
LIT32_23600	COG0584	glycerophosphoryl diester phosphodiesterase
LIT32_23605	COG1796	DNA polymerase
LIT32_23605	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LIT32_23610	COG0395	ABC-type sugar transport system, permease component
LIT32_23615	COG1175	transmembrane transport
LIT32_23625	COG1609	Transcriptional regulator
LIT32_23665	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LIT32_23670	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIT32_23675	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LIT32_23680	COG4464	protein tyrosine phosphatase activity
LIT32_23685	COG0489	protein tyrosine kinase activity
LIT32_23690	COG3944	biosynthesis protein
LIT32_23700	COG4715	Zinc finger, swim domain protein
LIT32_23705	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LIT32_23715	COG0629	single-stranded DNA binding
LIT32_23750	COG4786	Flagellar basal body rod
LIT32_23755	COG4786	Flagellar basal body rod
LIT32_23760	COG1077	Cell shape determining protein MreB Mrl
LIT32_23765	COG1609	Transcriptional regulator
LIT32_23770	COG0739	heme binding
LIT32_23780	COG1247	-acetyltransferase
LIT32_23785	COG2385	sporulation resulting in formation of a cellular spore
LIT32_23795	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LIT32_23805	COG4836	Membrane
LIT32_23810	COG1007	ATP synthesis coupled electron transport
LIT32_23815	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LIT32_23820	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LIT32_23825	COG0713	ATP synthesis coupled electron transport
LIT32_23840	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LIT32_23845	COG0649	NAD binding
LIT32_23850	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LIT32_23855	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LIT32_23870	COG0673	inositol 2-dehydrogenase activity
LIT32_23875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LIT32_23895	COG0477	Major facilitator Superfamily
LIT32_23900	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LIT32_23905	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LIT32_23910	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LIT32_23915	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LIT32_23920	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LIT32_23925	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LIT32_23935	COG0356	it plays a direct role in the translocation of protons across the membrane
LIT32_23950	COG1404	Belongs to the peptidase S8 family
LIT32_23955	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LIT32_23965	COG1968	undecaprenyl-diphosphatase activity
LIT32_23970	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LIT32_23980	COG0698	ribose 5-phosphate isomerase
LIT32_23990	COG1971	Probably functions as a manganese efflux pump
LIT32_23995	COG0009	L-threonylcarbamoyladenylate synthase
LIT32_24020	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LIT32_24025	COG0346	lactoylglutathione lyase activity
LIT32_24030	COG0789	Transcriptional regulator
LIT32_24040	COG1435	thymidine kinase activity
LIT32_24045	COG0254	rRNA binding
LIT32_24050	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LIT32_24055	COG1494	fructose-1,6-bisphosphatase
LIT32_24060	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LIT32_24065	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LIT32_24070	COG0191	fructose-bisphosphate aldolase activity
LIT32_24075	COG2204	response regulator
LIT32_24080	COG4821	SIS domain
LIT32_24085	COG0504	CTP synthase activity
LIT32_24095	COG3853	Toxic anion resistance protein (TelA)
LIT32_24130	COG2310	stress, protein
LIT32_24135	COG2310	stress, protein
LIT32_24145	COG1703	isobutyryl-CoA mutase activity
LIT32_24145	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
LIT32_24145	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
LIT32_24155	COG1960	acyl-CoA dehydrogenase activity
LIT32_24160	COG1960	acyl-CoA dehydrogenase activity
LIT32_24165	COG1250	3-hydroxyacyl-CoA dehydrogenase
LIT32_24170	COG0183	Belongs to the thiolase family
LIT32_24175	COG2181	nitrate reductase activity
LIT32_24175	COG0247	lactate metabolic process
LIT32_24180	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIT32_24185	COG4294	response to UV
LIT32_24190	COG0018	arginyl-trna synthetase
LIT32_24195	COG4506	Protein conserved in bacteria
LIT32_24200	COG0010	Belongs to the arginase family
LIT32_24205	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LIT32_24210	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LIT32_24220	COG1994	Peptidase M50
LIT32_24230	COG3465	dGTPase activity
LIT32_24235	COG1078	dGTPase activity
LIT32_24240	COG4844	belongs to the
LIT32_24255	COG0280	phosphate acetyltransferase
LIT32_24260	COG3253	May function as heme-dependent peroxidase
LIT32_24280	COG2363	Small membrane protein
LIT32_24315	COG0300	oxidoreductase activity
LIT32_24320	COG1216	Glycosyl transferase, family 2
LIT32_24360	COG0351	phosphomethylpyrimidine kinase
LIT32_24365	COG1621	beta-fructofuranosidase activity
LIT32_24370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT32_24375	COG1263	PTS System
LIT32_24375	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_24380	COG3711	transcriptional antiterminator
LIT32_24385	COG2059	Chromate
LIT32_24390	COG2059	Chromate
LIT32_24395	COG0405	Gamma-glutamyltransferase
LIT32_24400	COG1522	sequence-specific DNA binding
LIT32_24410	COG0778	Nitroreductase
LIT32_24415	COG3314	Sporulation integral membrane protein YlbJ
LIT32_24430	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LIT32_24435	COG1845	cytochrome c oxidase, subunit III
LIT32_24440	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LIT32_24450	COG0551	DNA topoisomerase type I activity
LIT32_24450	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LIT32_24460	COG0488	(ABC) transporter
LIT32_24470	COG0656	L-ascorbic acid biosynthetic process
LIT32_24475	COG1414	Transcriptional regulator
LIT32_24485	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_24490	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
LIT32_24505	COG2124	cytochrome p450
LIT32_24515	COG4895	conserved protein (DUF2196)
LIT32_24530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LIT32_24540	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LIT32_24575	COG1511	domain protein
LIT32_24580	COG0433	COG0433 Predicted ATPase
LIT32_24580	COG1674	ftsk spoiiie
LIT32_24585	COG4499	WXG100 protein secretion system (Wss), protein YukC
LIT32_24590	COG5417	Belongs to the EsaB family
LIT32_24595	COG4842	Belongs to the WXG100 family
LIT32_24640	COG2094	Belongs to the DNA glycosylase MPG family
LIT32_24650	COG2195	Cleaves the N-terminal amino acid of tripeptides
LIT32_24665	COG3842	ATPase activity
LIT32_24670	COG1176	ABC-type spermidine putrescine transport system, permease component I
LIT32_24680	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LIT32_24685	COG0326	Molecular chaperone. Has ATPase activity
LIT32_24690	COG1846	Transcriptional regulator
LIT32_24695	COG2814	Major facilitator Superfamily
LIT32_24700	COG2040	homocysteine
LIT32_24705	COG0833	amino acid
LIT32_24710	COG0745	RESPONSE REGULATOR receiver
LIT32_24715	COG2205	protein histidine kinase activity
LIT32_24720	COG1136	(ABC) transporter
LIT32_24725	COG0577	efflux transmembrane transporter activity
LIT32_24740	COG0579	oxidoreductase
LIT32_24750	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LIT32_24755	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LIT32_24765	COG1136	(ABC) transporter
LIT32_24770	COG0577	efflux transmembrane transporter activity
LIT32_24775	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LIT32_24805	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LIT32_24810	COG2814	Major facilitator Superfamily
LIT32_24840	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LIT32_24845	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LIT32_24850	COG4853	Protein conserved in bacteria
LIT32_24855	COG4863	YycH protein
LIT32_24860	COG5002	protein histidine kinase activity
LIT32_24865	COG0745	RESPONSE REGULATOR receiver
LIT32_24870	COG0739	heme binding
LIT32_24880	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LIT32_24885	COG0305	Participates in initiation and elongation during chromosome replication
LIT32_24890	COG0359	binds to the 23S rRNA
LIT32_24895	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
LIT32_24900	COG4241	membrane
LIT32_24905	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LIT32_24910	COG0629	single-stranded DNA binding
LIT32_24915	COG0360	Binds together with S18 to 16S ribosomal RNA
LIT32_24920	COG0012	GTP binding
LIT32_24925	COG4481	Protein conserved in bacteria
LIT32_24930	COG0668	transmembrane transport
LIT32_24945	COG1475	DNA binding
LIT32_24950	COG1192	Involved in chromosome partitioning
LIT32_24965	COG0445	tRNA wobble uridine modification
LIT32_24970	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LIT32_24975	COG1847	R3H domain protein
LIT32_24980	COG0706	membrane insertase activity
LIT32_24985	COG0594	ribonuclease P activity
LIT32_24995	COG0697	spore germination
LIT32_25015	COG2207	Transcriptional regulator
LIT32_25020	COG2249	NAD(P)H dehydrogenase (quinone) activity
LIT32_25025	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_25030	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LIT32_25040	COG2146	nitrite reductase [NAD(P)H] activity
LIT32_25050	COG1309	transcriptional regulator
LIT32_25060	COG2814	Major facilitator Superfamily
LIT32_25120	COG0640	Transcriptional regulator
LIT32_25125	COG0346	lactoylglutathione lyase activity
LIT32_25130	COG0697	spore germination
LIT32_25135	COG1247	-acetyltransferase
LIT32_25185	COG5577	PFAM Coat F domain
LIT32_25190	COG1063	alcohol dehydrogenase
LIT32_25200	COG0523	cobalamin synthesis protein
LIT32_25210	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LIT32_25220	COG0860	N-Acetylmuramoyl-L-alanine amidase
LIT32_25300	COG0392	lysyltransferase activity
LIT32_25300	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LIT32_25305	COG1733	regulation of RNA biosynthetic process
LIT32_25310	COG0778	Nitroreductase
LIT32_25335	COG1335	isochorismatase
LIT32_25350	COG0346	lactoylglutathione lyase activity
LIT32_25355	COG0346	lactoylglutathione lyase activity
LIT32_25360	COG0400	carboxylic ester hydrolase activity
LIT32_25365	COG2267	carboxylic ester hydrolase activity
LIT32_25380	COG3655	Transcriptional regulator
LIT32_25385	COG2364	Membrane
LIT32_25390	COG1846	Transcriptional regulator
LIT32_25395	COG0456	acetyltransferase
LIT32_25400	COG2808	Putative FMN-binding domain
LIT32_25405	COG0494	nUDIX hydrolase
LIT32_25430	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LIT32_25435	COG3119	arylsulfatase activity
LIT32_25445	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIT32_25450	COG1309	transcriptional regulator
LIT32_25455	COG0596	Alpha beta hydrolase
LIT32_25470	COG0583	DNA-binding transcription factor activity
LIT32_25485	COG1404	Belongs to the peptidase S8 family
LIT32_25510	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
LIT32_25540	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LIT32_25555	COG0367	asparagine synthase
LIT32_25580	COG1959	2 iron, 2 sulfur cluster binding
LIT32_25590	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LIT32_25600	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_25600	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_25605	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_25615	COG0398	Pfam SNARE associated Golgi protein
LIT32_25620	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LIT32_25625	COG4134	Bacterial extracellular solute-binding protein
LIT32_25640	COG3842	ATPase activity
LIT32_25660	COG2972	Histidine kinase
LIT32_25665	COG2207	Transcriptional regulator
LIT32_25665	COG4753	response regulator
LIT32_25675	COG1175	transmembrane transport
LIT32_25700	COG4412	M6 family metalloprotease domain protein
LIT32_25700	COG1404	Belongs to the peptidase S8 family
LIT32_25715	COG1764	response to oxidative stress
LIT32_25720	COG1764	response to oxidative stress
LIT32_25725	COG1764	response to oxidative stress
LIT32_25730	COG1764	response to oxidative stress
LIT32_25735	COG1764	response to oxidative stress
LIT32_25740	COG0589	response to stress
LIT32_25745	COG2814	Major facilitator Superfamily
LIT32_25770	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_25775	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LIT32_25780	COG2610	gluconate transmembrane transporter activity
LIT32_25785	COG0589	response to stress
LIT32_25790	COG0791	NLP P60 protein
LIT32_25790	COG1388	LysM domain
LIT32_25795	COG3237	CsbD-like
LIT32_25825	COG0693	protein deglycase activity
LIT32_25910	COG0791	NLP P60 protein
LIT32_25910	COG3883	PFAM NLP P60 protein
LIT32_25920	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LIT32_25925	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
LIT32_25990	COG1175	transmembrane transport
LIT32_25995	COG0395	ABC-type sugar transport system, permease component
LIT32_26000	COG2972	Histidine kinase
LIT32_26005	COG4753	response regulator
LIT32_26005	COG2207	Transcriptional regulator
LIT32_26025	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LIT32_26050	COG2003	Belongs to the UPF0758 family
LIT32_26060	COG1802	Transcriptional regulator
LIT32_26065	COG0697	spore germination
LIT32_26070	COG0028	Belongs to the TPP enzyme family
LIT32_26075	COG2188	Transcriptional regulator
LIT32_26080	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LIT32_26080	COG2190	(PTS) system
LIT32_26080	COG1263	PTS System
LIT32_26085	COG2723	6-phospho-beta-galactosidase activity
LIT32_26090	COG0154	amidase activity
LIT32_26125	COG1609	Transcriptional regulator
LIT32_26130	COG1653	transport
LIT32_26135	COG1175	transmembrane transport
LIT32_26140	COG0395	ABC-type sugar transport system, permease component
LIT32_26145	COG0366	Alpha amylase catalytic
LIT32_26155	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
LIT32_26165	COG1063	alcohol dehydrogenase
LIT32_26175	COG1940	carbohydrate kinase activity
LIT32_26180	COG1482	cell wall glycoprotein biosynthetic process
LIT32_26185	COG0247	lactate metabolic process
LIT32_26190	COG0277	FAD linked oxidase domain protein
LIT32_26195	COG3835	regulator
LIT32_26220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIT32_26270	COG1785	Belongs to the alkaline phosphatase family
LIT32_26280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
LIT32_26300	COG3290	protein histidine kinase activity
LIT32_26305	COG4565	transcriptional regulatory protein
LIT32_26310	COG3493	citrate carrier protein
LIT32_26315	COG0281	malic enzyme
LIT32_26325	COG2186	Transcriptional regulator
LIT32_26330	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LIT32_26335	COG1012	belongs to the aldehyde dehydrogenase family
LIT32_26340	COG1312	Catalyzes the dehydration of D-mannonate
LIT32_26365	COG0697	spore germination
LIT32_26415	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LIT32_26420	COG0805	protein transport
LIT32_26425	COG1051	belongs to the nudix hydrolase family
LIT32_26430	COG0702	epimerase
LIT32_26450	COG0667	Aldo Keto reductase
LIT32_26470	COG0697	spore germination
LIT32_26480	COG0640	Transcriptional regulator
LIT32_26495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIT32_26500	COG0601	transmembrane transport
LIT32_26505	COG4172	Belongs to the ABC transporter superfamily
LIT32_26520	COG1113	amino acid transport
LIT32_26525	COG0531	amino acid
LIT32_26535	COG0456	acetyltransferase
LIT32_26540	COG1268	BioY protein
LIT32_26545	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
LIT32_26560	COG0671	phosphoesterase, PA-phosphatase related
LIT32_26610	COG1694	Mazg nucleotide pyrophosphohydrolase
LIT32_26615	COG3545	Serine hydrolase
LIT32_26625	COG1940	carbohydrate kinase activity
LIT32_26640	COG2264	protein methyltransferase activity
LIT32_26675	COG0824	Thioesterase
LIT32_26785	COG3118	belongs to the thioredoxin family
LIT32_26805	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_26815	COG1028	Short-chain dehydrogenase reductase Sdr
LIT32_26825	COG0778	Nitroreductase
LIT32_26870	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LIT32_26895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LIT32_26905	COG0492	ferredoxin-NADP+ reductase activity
LIT32_26920	COG0673	inositol 2-dehydrogenase activity
LIT32_26925	COG0508	dehydrogenase complex catalyzes the overall conversion of
LIT32_26940	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LIT32_26960	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_26960	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_26965	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LIT32_26990	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LIT32_26995	COG0492	ferredoxin-NADP+ reductase activity
LIT32_27010	COG3118	belongs to the thioredoxin family
LIT32_27020	COG3059	membrane
LIT32_27040	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIT32_27060	COG2315	Protein conserved in bacteria
LIT32_27070	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LIT32_27075	COG2807	transmembrane transport
LIT32_27105	COG0778	Nitroreductase
LIT32_27150	COG1959	2 iron, 2 sulfur cluster binding
LIT32_27170	COG4221	oxidoreductase activity
LIT32_27240	COG3336	cytochrome c oxidase
LIT32_27245	COG0745	RESPONSE REGULATOR receiver
LIT32_27250	COG5002	protein histidine kinase activity
LIT32_27335	COG3059	membrane
LIT32_27400	COG2508	Transcriptional regulator
LIT32_27405	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LIT32_27410	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LIT32_27415	COG2233	PERMEase
LIT32_27430	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides