locus-tag	class	description
C3Y97_00005	PF11638	DnaA N-terminal domain
C3Y97_00005	PF08299	Bacterial dnaA protein helix-turn-helix
C3Y97_00005	PF00308	Bacterial dnaA  protein
C3Y97_00010	PF02767	DNA polymerase III beta subunit, central domain
C3Y97_00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
C3Y97_00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
C3Y97_00020	PF02463	RecF/RecN/SMC N terminal domain
C3Y97_00025	PF00204	DNA gyrase B
C3Y97_00025	PF00986	DNA gyrase B subunit, carboxyl terminus
C3Y97_00025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_00025	PF01751	Toprim domain
C3Y97_00030	PF00521	DNA gyrase/topoisomerase IV, subunit A
C3Y97_00030	PF03989	DNA gyrase C-terminal domain, beta-propeller
C3Y97_00060	PF14175	YaaC-like Protein
C3Y97_00065	PF00571	CBS domain
C3Y97_00065	PF00478	IMP dehydrogenase / GMP reductase domain
C3Y97_00070	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_00070	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_00075	PF01680	SOR/SNZ family
C3Y97_00080	PF01174	SNO glutamine amidotransferase family
C3Y97_00085	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3Y97_00085	PF02403	Seryl-tRNA synthetase N-terminal domain
C3Y97_00100	PF01712	Deoxynucleoside kinase
C3Y97_00105	PF01712	Deoxynucleoside kinase
C3Y97_00110	PF00857	Isochorismatase family
C3Y97_00120	PF14437	MafB19-like deaminase
C3Y97_00130	PF12169	DNA polymerase III subunits gamma and tau domain III
C3Y97_00135	PF02575	YbaB/EbfC DNA-binding family
C3Y97_00140	PF13662	Toprim domain
C3Y97_00140	PF02132	RecR protein
C3Y97_00145	PF10704	Protein of unknown function (DUF2508)
C3Y97_00150	PF07441	SigmaK-factor processing regulatory protein BofA
C3Y97_00185	PF01276	Orn/Lys/Arg decarboxylase, major domain
C3Y97_00185	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
C3Y97_00190	PF02223	Thymidylate kinase
C3Y97_00195	PF09115	DNA polymerase III, delta subunit, C terminal
C3Y97_00200	PF04468	PSP1 C-terminal conserved region
C3Y97_00205	PF06156	Initiation control protein YabA
C3Y97_00210	PF05175	Methyltransferase small domain
C3Y97_00215	PF01541	GIY-YIG catalytic domain
C3Y97_00220	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3Y97_00225	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
C3Y97_00225	PF18277	AbrB C-terminal domain
C3Y97_00230	PF08264	Anticodon-binding domain of tRNA
C3Y97_00230	PF01588	Putative tRNA binding domain
C3Y97_00230	PF09334	tRNA synthetases class I (M)
C3Y97_00235	PF01026	TatD related DNase
C3Y97_00240	PF13331	Domain of unknown function (DUF4093)
C3Y97_00240	PF13662	Toprim domain
C3Y97_00245	PF00398	Ribosomal RNA adenine dimethylase
C3Y97_00250	PF05582	YabG peptidase U57
C3Y97_00255	PF06257	Biofilm formation stimulator VEG
C3Y97_00260	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_00265	PF08544	GHMP kinases C terminal 
C3Y97_00265	PF00288	GHMP kinases N terminal domain
C3Y97_00270	PF09182	Bacterial purine repressor, N-terminal
C3Y97_00270	PF00156	Phosphoribosyl transferase domain
C3Y97_00275	PF01042	Endoribonuclease L-PSP
C3Y97_00280	PF04026	SpoVG
C3Y97_00285	PF00483	Nucleotidyl transferase
C3Y97_00285	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_00290	PF14572	Phosphoribosyl synthetase-associated domain
C3Y97_00290	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
C3Y97_00295	PF01195	Peptidyl-tRNA hydrolase
C3Y97_00305	PF02559	CarD-like/TRCF domain
C3Y97_00305	PF00270	DEAD/DEAH box helicase
C3Y97_00305	PF00271	Helicase conserved C-terminal domain
C3Y97_00305	PF03461	TRCF domain
C3Y97_00305	PF17757	UvrB interaction domain
C3Y97_00310	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
C3Y97_00310	PF15714	Stage V sporulation protein T C-terminal, transcription factor
C3Y97_00315	PF14667	Polysaccharide biosynthesis C-terminal domain
C3Y97_00315	PF01943	Polysaccharide biosynthesis protein
C3Y97_00320	PF03819	MazG nucleotide pyrophosphohydrolase domain
C3Y97_00320	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3Y97_00325	PF01479	S4 domain
C3Y97_00330	PF07873	YabP family
C3Y97_00335	PF09578	Spore cortex protein YabQ (Spore_YabQ)
C3Y97_00345	PF00575	S1 RNA binding domain
C3Y97_00360	PF07228	Stage II sporulation protein E (SpoIIE)
C3Y97_00365	PF01171	PP-loop family
C3Y97_00365	PF09179	TilS substrate binding domain
C3Y97_00365	PF11734	TilS substrate C-terminal domain
C3Y97_00375	PF01434	Peptidase family M41
C3Y97_00375	PF06480	FtsH Extracellular
C3Y97_00375	PF17862	AAA+ lid domain
C3Y97_00375	PF00004	ATPase family associated with various cellular activities (AAA)
C3Y97_00380	PF03309	Type III pantothenate kinase
C3Y97_00385	PF01430	Hsp33 protein
C3Y97_00390	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_00395	PF00425	chorismate binding enzyme
C3Y97_00395	PF04715	Anthranilate synthase component I, N terminal region
C3Y97_00400	PF00117	Glutamine amidotransferase class-I
C3Y97_00405	PF01063	Amino-transferase class IV
C3Y97_00410	PF00809	Pterin binding enzyme
C3Y97_00415	PF02152	Dihydroneopterin aldolase
C3Y97_00420	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
C3Y97_00425	PF01381	Helix-turn-helix
C3Y97_00430	PF01207	Dihydrouridine synthase (Dus)
C3Y97_00435	PF01336	OB-fold nucleic acid binding domain
C3Y97_00435	PF00152	tRNA synthetases class II (D, K and N) 
C3Y97_00515	PF05848	CtsR N-terminal HTH domain
C3Y97_00515	PF17727	CtsR C-terminal dimerization domain
C3Y97_00520	PF02151	UvrB/uvrC motif
C3Y97_00525	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
C3Y97_00530	PF00004	ATPase family associated with various cellular activities (AAA)
C3Y97_00530	PF07724	AAA domain (Cdc48 subfamily)
C3Y97_00530	PF02861	Clp amino terminal domain, pathogenicity island component
C3Y97_00530	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3Y97_00530	PF17871	AAA lid domain
C3Y97_00535	PF18073	Rubredoxin metal binding domain
C3Y97_00540	PF10635	DisA bacterial checkpoint controller linker region 
C3Y97_00540	PF02457	DisA bacterial checkpoint controller nucleotide-binding
C3Y97_00550	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
C3Y97_00555	PF02542	YgbB family
C3Y97_00560	PF00749	tRNA synthetases class I (E and Q), catalytic domain
C3Y97_00565	PF06426	Serine acetyltransferase, N-terminal 
C3Y97_00565	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_00570	PF09190	DALR domain
C3Y97_00570	PF01406	tRNA synthetases class I (C) catalytic domain
C3Y97_00575	PF00636	Ribonuclease III domain
C3Y97_00580	PF00588	SpoU rRNA Methylase family
C3Y97_00580	PF08032	RNA 2'-O ribose methyltransferase substrate binding
C3Y97_00585	PF05991	YacP-like NYN domain
C3Y97_00590	PF08281	Sigma-70, region 4
C3Y97_00590	PF04542	Sigma-70 region 2 
C3Y97_00595	PF00471	Ribosomal protein L33
C3Y97_00600	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
C3Y97_00605	PF02357	Transcription termination factor nusG
C3Y97_00605	PF00467	KOW motif
C3Y97_00610	PF03946	Ribosomal protein L11, N-terminal domain
C3Y97_00610	PF00298	Ribosomal protein L11, RNA binding domain
C3Y97_00615	PF00687	Ribosomal protein L1p/L10e family
C3Y97_00620	PF00466	Ribosomal protein L10
C3Y97_00625	PF00542	Ribosomal protein L7/L12 C-terminal domain
C3Y97_00625	PF16320	Ribosomal protein L7/L12 dimerisation domain
C3Y97_00630	PF05175	Methyltransferase small domain
C3Y97_00635	PF04561	RNA polymerase Rpb2, domain 2
C3Y97_00635	PF04565	RNA polymerase Rpb2, domain 3
C3Y97_00635	PF00562	RNA polymerase Rpb2, domain 6
C3Y97_00635	PF10385	RNA polymerase beta subunit external 1 domain
C3Y97_00635	PF04563	RNA polymerase beta subunit
C3Y97_00635	PF04560	RNA polymerase Rpb2, domain 7
C3Y97_00640	PF00623	RNA polymerase Rpb1, domain 2
C3Y97_00640	PF04997	RNA polymerase Rpb1, domain 1
C3Y97_00640	PF04983	RNA polymerase Rpb1, domain 3
C3Y97_00640	PF05000	RNA polymerase Rpb1, domain 4
C3Y97_00640	PF04998	RNA polymerase Rpb1, domain 5
C3Y97_00645	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
C3Y97_00650	PF00164	Ribosomal protein S12/S23
C3Y97_00655	PF00177	Ribosomal protein S7p/S5e
C3Y97_00660	PF03764	Elongation factor G, domain IV
C3Y97_00660	PF00009	Elongation factor Tu GTP binding domain
C3Y97_00660	PF03144	Elongation factor Tu domain 2
C3Y97_00660	PF00679	Elongation factor G C-terminus
C3Y97_00660	PF14492	Elongation Factor G, domain II
C3Y97_00665	PF03143	Elongation factor Tu C-terminal domain
C3Y97_00665	PF03144	Elongation factor Tu domain 2
C3Y97_00665	PF00009	Elongation factor Tu GTP binding domain
C3Y97_00675	PF00338	Ribosomal protein S10p/S20e
C3Y97_00680	PF00297	Ribosomal protein L3
C3Y97_00685	PF00573	Ribosomal protein L4/L1 family
C3Y97_00690	PF00276	Ribosomal protein L23
C3Y97_00695	PF00181	Ribosomal Proteins L2, RNA binding domain
C3Y97_00695	PF03947	Ribosomal Proteins L2, C-terminal domain
C3Y97_00700	PF00203	Ribosomal protein S19
C3Y97_00705	PF00237	Ribosomal protein L22p/L17e
C3Y97_00710	PF00189	Ribosomal protein S3, C-terminal domain
C3Y97_00710	PF07650	KH domain
C3Y97_00715	PF00252	Ribosomal protein L16p/L10e
C3Y97_00720	PF00831	Ribosomal L29 protein
C3Y97_00725	PF00366	Ribosomal protein S17
C3Y97_00730	PF00238	Ribosomal protein L14p/L23e
C3Y97_00735	PF00467	KOW motif
C3Y97_00735	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
C3Y97_00740	PF00281	Ribosomal protein L5
C3Y97_00740	PF00673	ribosomal L5P family C-terminus
C3Y97_00745	PF00253	Ribosomal protein S14p/S29e
C3Y97_00750	PF00410	Ribosomal protein S8
C3Y97_00755	PF00347	Ribosomal protein L6
C3Y97_00760	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
C3Y97_00765	PF03719	Ribosomal protein S5, C-terminal domain
C3Y97_00765	PF00333	Ribosomal protein S5, N-terminal domain
C3Y97_00770	PF00327	Ribosomal protein L30p/L7e
C3Y97_00775	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
C3Y97_00780	PF00344	SecY translocase
C3Y97_00785	PF05191	Adenylate kinase, active site lid
C3Y97_00790	PF00557	Metallopeptidase family M24
C3Y97_00795	PF01176	Translation initiation factor 1A / IF-1
C3Y97_00800	PF00444	Ribosomal protein L36
C3Y97_00805	PF00416	Ribosomal protein S13/S18
C3Y97_00810	PF00411	Ribosomal protein S11
C3Y97_00815	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
C3Y97_00815	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
C3Y97_00815	PF01000	RNA polymerase Rpb3/RpoA insert domain
C3Y97_00820	PF01196	Ribosomal protein L17
C3Y97_00825	PF00005	ABC transporter
C3Y97_00830	PF00005	ABC transporter
C3Y97_00835	PF02361	Cobalt transport protein
C3Y97_00840	PF01416	tRNA pseudouridine synthase
C3Y97_00845	PF00572	Ribosomal protein L13
C3Y97_00850	PF00380	Ribosomal protein S9/S16
C3Y97_00860	PF01520	N-acetylmuramoyl-L-alanine amidase
C3Y97_00865	PF10609	NUBPL iron-transfer P-loop NTPase
C3Y97_00870	PF17898	Spore germination GerD central core domain
C3Y97_00875	PF14089	KinB-signalling pathway activation in sporulation
C3Y97_00880	PF01522	Polysaccharide deacetylase
C3Y97_00950	PF02595	Glycerate kinase family
C3Y97_00955	PF00491	Arginase family
C3Y97_00960	PF02457	DisA bacterial checkpoint controller nucleotide-binding
C3Y97_00965	PF07949	YbbR-like protein
C3Y97_00970	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
C3Y97_00970	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
C3Y97_00970	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
C3Y97_00970	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
C3Y97_00980	PF01380	SIS domain
C3Y97_00990	PF00930	Dipeptidyl peptidase IV (DPP IV) N-terminal region
C3Y97_00990	PF00326	Prolyl oligopeptidase family
C3Y97_01010	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_01015	PF09383	NIL domain
C3Y97_01015	PF00005	ABC transporter
C3Y97_01020	PF03180	NLPA lipoprotein
C3Y97_01035	PF01565	FAD binding domain 
C3Y97_01040	PF07690	Major Facilitator Superfamily
C3Y97_01050	PF07690	Major Facilitator Superfamily
C3Y97_01070	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_01075	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3Y97_01075	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_01080	PF00005	ABC transporter
C3Y97_01080	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_01085	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_01085	PF00005	ABC transporter
C3Y97_01090	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_01100	PF12833	Helix-turn-helix domain
C3Y97_01115	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_01120	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_01125	PF00248	Aldo/keto reductase family
C3Y97_01130	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3Y97_01130	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3Y97_01135	PF06800	Sugar transport protein
C3Y97_01140	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_01150	PF12728	Helix-turn-helix domain
C3Y97_01150	PF12727	PBP superfamily domain
C3Y97_01165	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_01165	PF03466	LysR substrate binding domain
C3Y97_01170	PF00892	EamA-like transporter family
C3Y97_01175	PF14142	YrzO-like protein
C3Y97_01185	PF01553	Acyltransferase
C3Y97_01200	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_01200	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3Y97_01210	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_01210	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_01230	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
C3Y97_01255	PF00005	ABC transporter
C3Y97_01255	PF16326	ABC transporter C-terminal domain
C3Y97_01255	PF12848	ABC transporter
C3Y97_01270	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_01275	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_01285	PF00005	ABC transporter
C3Y97_01285	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_01290	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_01290	PF00005	ABC transporter
C3Y97_01325	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_01330	PF01557	Fumarylacetoacetate (FAA) hydrolase family
C3Y97_01340	PF13520	Amino acid permease
C3Y97_01345	PF07690	Major Facilitator Superfamily
C3Y97_01350	PF01820	D-ala D-ala ligase N-terminus
C3Y97_01350	PF07478	D-ala D-ala ligase C-terminus
C3Y97_01355	PF08245	Mur ligase middle domain
C3Y97_01355	PF01225	Mur ligase family, catalytic domain
C3Y97_01355	PF02875	Mur ligase family, glutamate ligase domain
C3Y97_01360	PF00270	DEAD/DEAH box helicase
C3Y97_01360	PF00271	Helicase conserved C-terminal domain
C3Y97_01365	PF03851	UV-endonuclease UvdE
C3Y97_01370	PF01694	Rhomboid family
C3Y97_01375	PF01648	4'-phosphopantetheinyl transferase superfamily
C3Y97_01385	PF01168	Alanine racemase, N-terminal domain
C3Y97_01385	PF00842	Alanine racemase, C-terminal domain
C3Y97_01390	PF01402	Ribbon-helix-helix protein, copG family
C3Y97_01395	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
C3Y97_01400	PF17674	HHH domain
C3Y97_01400	PF16921	Tex protein YqgF-like domain
C3Y97_01400	PF00575	S1 RNA binding domain
C3Y97_01400	PF09371	Tex-like protein N-terminal domain
C3Y97_01410	PF17283	SprT-like zinc ribbon domain
C3Y97_01410	PF10263	SprT-like family
C3Y97_01500	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
C3Y97_01505	PF00814	Glycoprotease family
C3Y97_01510	PF00583	Acetyltransferase (GNAT) family
C3Y97_01515	PF00814	Glycoprotease family
C3Y97_01520	PF12848	ABC transporter
C3Y97_01520	PF16326	ABC transporter C-terminal domain
C3Y97_01520	PF00005	ABC transporter
C3Y97_01525	PF06971	Putative DNA-binding protein N-terminus
C3Y97_01525	PF02629	CoA binding domain
C3Y97_01535	PF02517	CPBP intramembrane metalloprotease
C3Y97_01540	PF00166	Chaperonin 10 Kd subunit
C3Y97_01545	PF00118	TCP-1/cpn60 chaperonin family
C3Y97_01550	PF02540	NAD synthase
C3Y97_01550	PF00117	Glutamine amidotransferase class-I
C3Y97_01550	PF00958	GMP synthase C terminal domain
C3Y97_01555	PF00860	Permease family
C3Y97_01560	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_01560	PF00072	Response regulator receiver domain
C3Y97_01565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_01565	PF00989	PAS fold
C3Y97_01565	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_01565	PF16736	Single Cache-like 
C3Y97_01595	PF01323	DSBA-like thioredoxin domain
C3Y97_01625	PF02673	Bacitracin resistance protein BacA
C3Y97_01635	PF00005	ABC transporter
C3Y97_01640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_01640	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_01645	PF00072	Response regulator receiver domain
C3Y97_01645	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_01665	PF14307	Glycosyltransferase WbsX
C3Y97_01665	PF05045	Rhamnan synthesis protein F
C3Y97_01675	PF08241	Methyltransferase domain
C3Y97_01685	PF01370	NAD dependent epimerase/dehydratase family
C3Y97_01695	PF00535	Glycosyl transferase family 2
C3Y97_01715	PF00892	EamA-like transporter family
C3Y97_01745	PF00731	AIR carboxylase
C3Y97_01750	PF02222	ATP-grasp domain
C3Y97_01750	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
C3Y97_01755	PF10397	Adenylosuccinate lyase C-terminus
C3Y97_01755	PF00206	Lyase
C3Y97_01760	PF01259	SAICAR synthetase
C3Y97_01765	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
C3Y97_01775	PF00586	AIR synthase related protein, N-terminal domain
C3Y97_01775	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
C3Y97_01775	PF02769	AIR synthase related protein, C-terminal domain
C3Y97_01780	PF00156	Phosphoribosyl transferase domain
C3Y97_01785	PF02769	AIR synthase related protein, C-terminal domain
C3Y97_01785	PF00586	AIR synthase related protein, N-terminal domain
C3Y97_01790	PF00551	Formyl transferase
C3Y97_01795	PF01808	AICARFT/IMPCHase bienzyme
C3Y97_01795	PF02142	MGS-like domain
C3Y97_01800	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
C3Y97_01800	PF02843	Phosphoribosylglycinamide synthetase, C domain
C3Y97_01800	PF02844	Phosphoribosylglycinamide synthetase, N domain
C3Y97_01825	PF01884	PcrB family
C3Y97_01830	PF13361	UvrD-like helicase C-terminal domain
C3Y97_01830	PF00580	UvrD/REP helicase N-terminal domain
C3Y97_01835	PF12826	Helix-hairpin-helix motif
C3Y97_01835	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
C3Y97_01835	PF03120	NAD-dependent DNA ligase OB-fold domain
C3Y97_01835	PF01653	NAD-dependent DNA ligase adenylation domain
C3Y97_01835	PF00533	BRCA1 C Terminus (BRCT) domain
C3Y97_01840	PF07537	CamS sex pheromone cAM373 precursor
C3Y97_01845	PF01925	Sulfite exporter TauE/SafE
C3Y97_01850	PF00171	Aldehyde dehydrogenase family
C3Y97_01855	PF00857	Isochorismatase family
C3Y97_01860	PF09383	NIL domain
C3Y97_01860	PF00005	ABC transporter
C3Y97_01865	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_01870	PF03180	NLPA lipoprotein
C3Y97_01885	PF17886	HSP20-like domain found in ArsA
C3Y97_01885	PF02374	Anion-transporting ATPase
C3Y97_01890	PF01047	MarR family
C3Y97_01895	PF05360	yiaA/B two helix domain
C3Y97_01900	PF02686	Glu-tRNAGln amidotransferase C subunit
C3Y97_01905	PF01425	Amidase
C3Y97_01910	PF02934	GatB/GatE catalytic domain
C3Y97_01910	PF02637	GatB domain
C3Y97_01915	PF00781	Diacylglycerol kinase catalytic domain
C3Y97_01920	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_01925	PF00202	Aminotransferase class-III
C3Y97_01930	PF00158	Sigma-54 interaction domain
C3Y97_01935	PF00171	Aldehyde dehydrogenase family
C3Y97_01940	PF00893	Small Multidrug Resistance protein
C3Y97_01950	PF02073	Thermophilic metalloprotease (M29)
C3Y97_01965	PF01773	Na+ dependent nucleoside transporter N-terminus
C3Y97_01965	PF07670	Nucleoside recognition
C3Y97_01965	PF07662	Na+ dependent nucleoside transporter C-terminus
C3Y97_01970	PF13847	Methyltransferase domain
C3Y97_01970	PF01938	TRAM domain
C3Y97_01970	PF05958	tRNA (Uracil-5-)-methyltransferase
C3Y97_01975	PF01207	Dihydrouridine synthase (Dus)
C3Y97_01980	PF07308	Protein of unknown function (DUF1456)
C3Y97_01995	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
C3Y97_01995	PF13378	Enolase C-terminal domain-like
C3Y97_02010	PF07687	Peptidase dimerisation domain
C3Y97_02010	PF01546	Peptidase family M20/M25/M40
C3Y97_02020	PF13192	Thioredoxin domain
C3Y97_02020	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_02025	PF00578	AhpC/TSA family
C3Y97_02030	PF01636	Phosphotransferase enzyme family
C3Y97_02040	PF00596	Class II Aldolase and Adducin N-terminal domain
C3Y97_02045	PF01032	FecCD transport family
C3Y97_02050	PF01032	FecCD transport family
C3Y97_02055	PF01497	Periplasmic binding protein
C3Y97_02080	PF12728	Helix-turn-helix domain
C3Y97_02105	PF00989	PAS fold
C3Y97_02105	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_02105	PF13188	PAS domain
C3Y97_02105	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_02105	PF13426	PAS domain
C3Y97_02125	PF10127	RNA repair pathway DNA polymerase beta family
C3Y97_02130	PF07690	Major Facilitator Superfamily
C3Y97_02135	PF01266	FAD dependent oxidoreductase
C3Y97_02135	PF00355	Rieske [2Fe-2S] domain
C3Y97_02145	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_02150	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3Y97_02155	PF00005	ABC transporter
C3Y97_02160	PF00672	HAMP domain
C3Y97_02160	PF12729	Four helix bundle sensory module for signal transduction
C3Y97_02160	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_02165	PF02863	Arginine repressor, C-terminal domain
C3Y97_02165	PF01316	Arginine repressor, DNA binding domain
C3Y97_02175	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3Y97_02175	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3Y97_02180	PF13520	Amino acid permease
C3Y97_02185	PF00696	Amino acid kinase family
C3Y97_02190	PF13545	Crp-like helix-turn-helix domain
C3Y97_02190	PF00027	Cyclic nucleotide-binding domain
C3Y97_02200	PF08031	Berberine and berberine like 
C3Y97_02200	PF01565	FAD binding domain 
C3Y97_02205	PF00128	Alpha amylase, catalytic domain
C3Y97_02205	PF16657	Maltogenic Amylase, C-terminal domain
C3Y97_02210	PF02378	Phosphotransferase system, EIIC 
C3Y97_02210	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
C3Y97_02210	PF00367	phosphotransferase system, EIIB
C3Y97_02215	PF03372	Endonuclease/Exonuclease/phosphatase family
C3Y97_02220	PF01061	ABC-2 type transporter
C3Y97_02225	PF01131	DNA topoisomerase
C3Y97_02225	PF01751	Toprim domain
C3Y97_02230	PF02110	Hydroxyethylthiazole kinase family
C3Y97_02235	PF02581	Thiamine monophosphate synthase
C3Y97_02240	PF03605	Anaerobic c4-dicarboxylate membrane transporter
C3Y97_02245	PF00672	HAMP domain
C3Y97_02245	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_02250	PF00501	AMP-binding enzyme
C3Y97_02250	PF00975	Thioesterase domain
C3Y97_02250	PF00550	Phosphopantetheine attachment site
C3Y97_02250	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_02250	PF00668	Condensation domain
C3Y97_02255	PF01910	Thiamine-binding protein
C3Y97_02260	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_02270	PF00005	ABC transporter
C3Y97_02280	PF00041	Fibronectin type III domain
C3Y97_02280	PF00704	Glycosyl hydrolases family 18
C3Y97_02310	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_02310	PF08360	QacR-like protein, C-terminal region
C3Y97_02325	PF11700	Vacuole effluxer Atg22 like
C3Y97_02340	PF09180	Prolyl-tRNA synthetase, C-terminal
C3Y97_02340	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3Y97_02340	PF03129	Anticodon binding domain
C3Y97_02350	PF00480	ROK family
C3Y97_02355	PF02342	TerD domain
C3Y97_02360	PF02342	TerD domain
C3Y97_02365	PF02342	TerD domain
C3Y97_02370	PF03741	Integral membrane protein TerC family
C3Y97_02375	PF14266	Putative component of 'biosynthetic module'
C3Y97_02380	PF05816	Toxic anion resistance protein (TelA)
C3Y97_02385	PF00689	Cation transporting ATPase, C-terminus
C3Y97_02385	PF00690	Cation transporter/ATPase, N-terminus
C3Y97_02390	PF06569	Protein of unknown function (DUF1128)
C3Y97_02395	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3Y97_02405	PF03631	Virulence factor BrkB
C3Y97_02420	PF00892	EamA-like transporter family
C3Y97_02430	PF10502	Signal peptidase, peptidase S26 
C3Y97_02440	PF09335	SNARE associated Golgi protein
C3Y97_02455	PF16242	Pyridoxamine 5'-phosphate oxidase like
C3Y97_02460	PF01699	Sodium/calcium exchanger protein
C3Y97_02465	PF14167	YfkD-like protein
C3Y97_02470	PF04055	Radical SAM superfamily
C3Y97_02470	PF08756	YfkB-like domain
C3Y97_02480	PF05683	Fumarase C-terminus
C3Y97_02480	PF05681	Fumarate hydratase (Fumerase)
C3Y97_02485	PF01522	Polysaccharide deacetylase
C3Y97_02490	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3Y97_02495	PF05958	tRNA (Uracil-5-)-methyltransferase
C3Y97_02495	PF01938	TRAM domain
C3Y97_02510	PF01416	tRNA pseudouridine synthase
C3Y97_02520	PF00158	Sigma-54 interaction domain
C3Y97_02520	PF13426	PAS domain
C3Y97_02520	PF02954	Bacterial regulatory protein, Fis family
C3Y97_02530	PF00324	Amino acid permease
C3Y97_02535	PF07687	Peptidase dimerisation domain
C3Y97_02535	PF01546	Peptidase family M20/M25/M40
C3Y97_02565	PF04960	Glutaminase
C3Y97_02570	PF02378	Phosphotransferase system, EIIC 
C3Y97_02570	PF00367	phosphotransferase system, EIIB
C3Y97_02575	PF00144	Beta-lactamase
C3Y97_02590	PF00535	Glycosyl transferase family 2
C3Y97_02595	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3Y97_02595	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3Y97_02595	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3Y97_02600	PF02911	Formyl transferase, C-terminal domain
C3Y97_02600	PF00551	Formyl transferase
C3Y97_02600	PF01370	NAD dependent epimerase/dehydratase family
C3Y97_02605	PF00535	Glycosyl transferase family 2
C3Y97_02615	PF02901	Pyruvate formate lyase-like
C3Y97_02615	PF01228	Glycine radical
C3Y97_02620	PF04055	Radical SAM superfamily
C3Y97_02625	PF04101	Glycosyltransferase family 28 C-terminal domain
C3Y97_02625	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
C3Y97_02640	PF01979	Amidohydrolase family
C3Y97_02645	PF01370	NAD dependent epimerase/dehydratase family
C3Y97_02645	PF08338	Domain of unknown function (DUF1731)
C3Y97_02650	PF02631	RecX family
C3Y97_02665	PF08176	Small acid-soluble spore protein K family
C3Y97_02670	PF14043	WVELL protein
C3Y97_02675	PF04307	LexA-binding, inner membrane-associated putative hydrolase
C3Y97_02680	PF14815	NUDIX domain
C3Y97_02680	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3Y97_02690	PF04259	Small, acid-soluble spore protein, gamma-type 
C3Y97_02695	PF14182	YgaB-like protein
C3Y97_02700	PF04167	Protein of unknown function (DUF402)
C3Y97_02705	PF00005	ABC transporter
C3Y97_02705	PF00664	ABC transporter transmembrane region
C3Y97_02710	PF06081	Aromatic acid exporter family member 1
C3Y97_02715	PF04898	Glutamate synthase central domain
C3Y97_02715	PF01493	GXGXG motif
C3Y97_02715	PF00310	Glutamine amidotransferases class-II
C3Y97_02715	PF01645	Conserved region in glutamate synthase
C3Y97_02720	PF00202	Aminotransferase class-III
C3Y97_02725	PF00005	ABC transporter
C3Y97_02740	PF07885	Ion channel
C3Y97_02745	PF00578	AhpC/TSA family
C3Y97_02750	PF01475	Ferric uptake regulator family
C3Y97_02760	PF11023	Zinc-ribbon containing domain
C3Y97_02865	PF01709	Transcriptional regulator
C3Y97_02870	PF00293	NUDIX domain
C3Y97_02870	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_02875	PF00912	Transglycosylase
C3Y97_02875	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_02880	PF13462	Thioredoxin
C3Y97_02890	PF08331	Domain of unknown function (DUF1730)
C3Y97_02895	PF12671	Putative amidase domain
C3Y97_02900	PF00588	SpoU rRNA Methylase family
C3Y97_02905	PF00563	EAL domain
C3Y97_02905	PF03707	Bacterial signalling protein N terminal repeat
C3Y97_02905	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_02915	PF08298	PrkA AAA domain
C3Y97_02915	PF06798	PrkA serine protein kinase C-terminal domain
C3Y97_02930	PF04285	Protein of unknown function (DUF444)
C3Y97_02945	PF02028	BCCT, betaine/carnitine/choline family transporter
C3Y97_02950	PF01752	Collagenase
C3Y97_02950	PF18496	Collagenase G catalytic helper subdomain
C3Y97_02950	PF08453	Peptidase family M9 N-terminal
C3Y97_02960	PF15975	Flotillin
C3Y97_02960	PF01145	SPFH domain / Band 7 family
C3Y97_02965	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_02965	PF00672	HAMP domain
C3Y97_02965	PF02743	Cache domain
C3Y97_02970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_02970	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3Y97_02970	PF17203	Single cache domain 3
C3Y97_02970	PF00989	PAS fold
C3Y97_02975	PF12431	Transcriptional regulator 
C3Y97_02975	PF00072	Response regulator receiver domain
C3Y97_02980	PF03600	Citrate transporter
C3Y97_03005	PF04309	Glycerol-3-phosphate responsive antiterminator
C3Y97_03010	PF17912	MalK OB fold domain
C3Y97_03010	PF00005	ABC transporter
C3Y97_03015	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_03020	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_03025	PF13416	Bacterial extracellular solute-binding protein
C3Y97_03030	PF00149	Calcineurin-like phosphoesterase
C3Y97_03035	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_03035	PF00072	Response regulator receiver domain
C3Y97_03040	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_03040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_03050	PF13529	Peptidase_C39 like family
C3Y97_03055	PF00672	HAMP domain
C3Y97_03055	PF02743	Cache domain
C3Y97_03055	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_03060	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_03060	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3Y97_03060	PF17203	Single cache domain 3
C3Y97_03060	PF00989	PAS fold
C3Y97_03065	PF00072	Response regulator receiver domain
C3Y97_03070	PF03390	2-hydroxycarboxylate transporter family
C3Y97_03075	PF00390	Malic enzyme, N-terminal domain
C3Y97_03075	PF03949	Malic enzyme, NAD binding domain
C3Y97_03085	PF00892	EamA-like transporter family
C3Y97_03090	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_03090	PF00155	Aminotransferase class I and II
C3Y97_03100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_03100	PF00672	HAMP domain
C3Y97_03100	PF18698	Histidine kinase sensor domain
C3Y97_03100	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_03100	PF00989	PAS fold
C3Y97_03105	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_03105	PF00072	Response regulator receiver domain
C3Y97_03120	PF02634	FdhD/NarQ family
C3Y97_03125	PF00384	Molybdopterin oxidoreductase
C3Y97_03125	PF01568	Molydopterin dinucleotide binding domain
C3Y97_03125	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
C3Y97_03125	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C3Y97_03125	PF00037	4Fe-4S binding domain
C3Y97_03130	PF07849	Protein of unknown function (DUF1641)
C3Y97_03140	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
C3Y97_03140	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
C3Y97_03145	PF13520	Amino acid permease
C3Y97_03160	PF01022	Bacterial regulatory protein, arsR family
C3Y97_03165	PF00403	Heavy-metal-associated domain
C3Y97_03170	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
C3Y97_03170	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
C3Y97_03170	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
C3Y97_03185	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3Y97_03185	PF01447	Thermolysin metallopeptidase, catalytic domain
C3Y97_03185	PF03413	Peptidase propeptide and YPEB domain
C3Y97_03185	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3Y97_03205	PF04294	VanW like protein
C3Y97_03210	PF03816	Cell envelope-related transcriptional attenuator domain
C3Y97_03215	PF07662	Na+ dependent nucleoside transporter C-terminus
C3Y97_03215	PF01773	Na+ dependent nucleoside transporter N-terminus
C3Y97_03220	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_03225	PF03471	Transporter associated domain
C3Y97_03225	PF00571	CBS domain
C3Y97_03225	PF01595	Cyclin M transmembrane N-terminal domain
C3Y97_03230	PF10415	Fumarase C C-terminus
C3Y97_03230	PF00206	Lyase
C3Y97_03235	PF02652	L-lactate permease
C3Y97_03240	PF01022	Bacterial regulatory protein, arsR family
C3Y97_03245	PF08141	Small acid-soluble spore protein H family
C3Y97_03250	PF00854	POT family
C3Y97_03255	PF01497	Periplasmic binding protein
C3Y97_03260	PF01032	FecCD transport family
C3Y97_03265	PF01032	FecCD transport family
C3Y97_03270	PF00005	ABC transporter
C3Y97_03280	PF00155	Aminotransferase class I and II
C3Y97_03285	PF01370	NAD dependent epimerase/dehydratase family
C3Y97_03290	PF00293	NUDIX domain
C3Y97_03290	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_03295	PF00092	von Willebrand factor type A domain
C3Y97_03300	PF07728	AAA domain (dynein-related subfamily)
C3Y97_03305	PF13396	Phospholipase_D-nuclease N-terminal
C3Y97_03305	PF13091	PLD-like domain
C3Y97_03315	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_03315	PF00563	EAL domain
C3Y97_03315	PF03707	Bacterial signalling protein N terminal repeat
C3Y97_03320	PF13520	Amino acid permease
C3Y97_03325	PF07702	UTRA domain
C3Y97_03325	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_03330	PF02378	Phosphotransferase system, EIIC 
C3Y97_03330	PF00367	phosphotransferase system, EIIB
C3Y97_03335	PF00128	Alpha amylase, catalytic domain
C3Y97_03335	PF16657	Maltogenic Amylase, C-terminal domain
C3Y97_03350	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_03360	PF01636	Phosphotransferase enzyme family
C3Y97_03365	PF01235	Sodium:alanine symporter family
C3Y97_03375	PF00005	ABC transporter
C3Y97_03380	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3Y97_03385	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_03390	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_03395	PF00324	Amino acid permease
C3Y97_03420	PF13280	WYL domain
C3Y97_03420	PF08279	HTH domain
C3Y97_03425	PF01872	RibD C-terminal domain
C3Y97_03430	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_03430	PF00989	PAS fold
C3Y97_03430	PF18698	Histidine kinase sensor domain
C3Y97_03430	PF00672	HAMP domain
C3Y97_03430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_03435	PF00072	Response regulator receiver domain
C3Y97_03435	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_03455	PF01740	STAS domain
C3Y97_03455	PF00916	Sulfate permease family
C3Y97_03460	PF00582	Universal stress protein family
C3Y97_03470	PF07690	Major Facilitator Superfamily
C3Y97_03475	PF01047	MarR family
C3Y97_03480	PF07690	Major Facilitator Superfamily
C3Y97_03485	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_03490	PF00294	pfkB family carbohydrate kinase
C3Y97_03495	PF05025	RbsD / FucU transport protein family
C3Y97_03500	PF00005	ABC transporter
C3Y97_03505	PF02653	Branched-chain amino acid transport system / permease component
C3Y97_03510	PF13407	Periplasmic binding protein domain
C3Y97_03515	PF00923	Transaldolase/Fructose-6-phosphate aldolase
C3Y97_03520	PF05547	Immune inhibitor A peptidase M6
C3Y97_03535	PF00107	Zinc-binding dehydrogenase
C3Y97_03535	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_03545	PF00882	Zinc dependent phospholipase C
C3Y97_03550	PF03372	Endonuclease/Exonuclease/phosphatase family
C3Y97_03580	PF02673	Bacitracin resistance protein BacA
C3Y97_03585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_03585	PF00672	HAMP domain
C3Y97_03585	PF02743	Cache domain
C3Y97_03590	PF06725	3D domain
C3Y97_03590	PF03990	G5-linked-Ubiquitin-like domain
C3Y97_03590	PF07501	G5 domain
C3Y97_03595	PF01381	Helix-turn-helix
C3Y97_03605	PF04203	Sortase domain
C3Y97_03615	PF00854	POT family
C3Y97_03620	PF05525	Branched-chain amino acid transport protein
C3Y97_03635	PF00324	Amino acid permease
C3Y97_03640	PF00860	Permease family
C3Y97_03655	PF13673	Acetyltransferase (GNAT) domain
C3Y97_03665	PF00999	Sodium/hydrogen exchanger family
C3Y97_03665	PF02080	TrkA-C domain
C3Y97_03665	PF02254	TrkA-N domain
C3Y97_03675	PF00510	Cytochrome c oxidase subunit III
C3Y97_03680	PF00115	Cytochrome C and Quinol oxidase polypeptide I
C3Y97_03685	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
C3Y97_03690	PF00324	Amino acid permease
C3Y97_03695	PF13529	Peptidase_C39 like family
C3Y97_03700	PF01546	Peptidase family M20/M25/M40
C3Y97_03700	PF07687	Peptidase dimerisation domain
C3Y97_03705	PF11755	Protein of unknown function (DUF3311)
C3Y97_03710	PF00474	Sodium:solute symporter family
C3Y97_03715	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_03720	PF03845	Spore germination protein
C3Y97_03725	PF05504	Spore germination B3/ GerAC like, C-terminal 
C3Y97_03735	PF07670	Nucleoside recognition
C3Y97_03735	PF02421	Ferrous iron transport protein B
C3Y97_03735	PF17910	FeoB cytosolic helical domain
C3Y97_03735	PF07664	Ferrous iron transport protein B C terminus
C3Y97_03740	PF17910	FeoB cytosolic helical domain
C3Y97_03740	PF07664	Ferrous iron transport protein B C terminus
C3Y97_03740	PF02421	Ferrous iron transport protein B
C3Y97_03740	PF07670	Nucleoside recognition
C3Y97_03745	PF07670	Nucleoside recognition
C3Y97_03745	PF02421	Ferrous iron transport protein B
C3Y97_03745	PF17910	FeoB cytosolic helical domain
C3Y97_03745	PF04023	FeoA domain
C3Y97_03745	PF07664	Ferrous iron transport protein B C terminus
C3Y97_03750	PF12849	PBP superfamily domain
C3Y97_03755	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_03760	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_03770	PF00873	AcrB/AcrD/AcrF family
C3Y97_03890	PF00571	CBS domain
C3Y97_03910	PF08239	Bacterial SH3 domain
C3Y97_03910	PF00246	Zinc carboxypeptidase
C3Y97_03915	PF03070	TENA/THI-4/PQQC family
C3Y97_03920	PF00005	ABC transporter
C3Y97_03925	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_03930	PF09084	NMT1/THI5 like
C3Y97_03935	PF02581	Thiamine monophosphate synthase
C3Y97_03940	PF01266	FAD dependent oxidoreductase
C3Y97_03945	PF02597	ThiS family
C3Y97_03950	PF05690	Thiazole biosynthesis protein ThiG
C3Y97_03955	PF00899	ThiF family
C3Y97_03960	PF08543	Phosphomethylpyrimidine kinase
C3Y97_03985	PF03814	Potassium-transporting ATPase A subunit
C3Y97_03995	PF02669	K+-transporting ATPase, c chain
C3Y97_04000	PF02702	Osmosensitive K+ channel His kinase sensor domain
C3Y97_04005	PF07690	Major Facilitator Superfamily
C3Y97_04010	PF01047	MarR family
C3Y97_04035	PF00005	ABC transporter
C3Y97_04050	PF02653	Branched-chain amino acid transport system / permease component
C3Y97_04055	PF00005	ABC transporter
C3Y97_04065	PF00860	Permease family
C3Y97_04075	PF17969	L,D-transpeptidase C-terminal domain
C3Y97_04075	PF03734	L,D-transpeptidase catalytic domain
C3Y97_04085	PF00294	pfkB family carbohydrate kinase
C3Y97_04090	PF08244	Glycosyl hydrolases family 32 C terminal
C3Y97_04090	PF00251	Glycosyl hydrolases family 32 N-terminal domain
C3Y97_04095	PF02378	Phosphotransferase system, EIIC 
C3Y97_04095	PF00367	phosphotransferase system, EIIB
C3Y97_04100	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_04100	PF13407	Periplasmic binding protein domain
C3Y97_04110	PF00085	Thioredoxin
C3Y97_04115	PF02600	Disulfide bond formation protein DsbB
C3Y97_04120	PF14148	YhdB-like protein
C3Y97_04130	PF03845	Spore germination protein
C3Y97_04140	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_04150	PF00881	Nitroreductase family
C3Y97_04155	PF04293	SpoVR like protein
C3Y97_04165	PF01614	Bacterial transcriptional regulator
C3Y97_04165	PF09339	IclR helix-turn-helix domain
C3Y97_04180	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_04180	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3Y97_04185	PF02583	Metal-sensitive transcriptional repressor
C3Y97_04190	PF01206	Sulfurtransferase TusA
C3Y97_04190	PF00581	Rhodanese-like domain
C3Y97_04195	PF00581	Rhodanese-like domain
C3Y97_04195	PF00753	Metallo-beta-lactamase superfamily
C3Y97_04200	PF01206	Sulfurtransferase TusA
C3Y97_04205	PF00581	Rhodanese-like domain
C3Y97_04205	PF01206	Sulfurtransferase TusA
C3Y97_04210	PF00581	Rhodanese-like domain
C3Y97_04215	PF13686	DsrE/DsrF/DrsH-like family
C3Y97_04220	PF01925	Sulfite exporter TauE/SafE
C3Y97_04230	PF03816	Cell envelope-related transcriptional attenuator domain
C3Y97_04235	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_04235	PF00107	Zinc-binding dehydrogenase
C3Y97_04240	PF02690	Na+/Pi-cotransporter
C3Y97_04245	PF07690	Major Facilitator Superfamily
C3Y97_04260	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
C3Y97_04260	PF05043	Mga helix-turn-helix domain
C3Y97_04260	PF08279	HTH domain
C3Y97_04260	PF00874	PRD domain
C3Y97_04265	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
C3Y97_04270	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3Y97_04275	PF02378	Phosphotransferase system, EIIC 
C3Y97_04295	PF01476	LysM domain
C3Y97_04295	PF06725	3D domain
C3Y97_04300	PF12704	MacB-like periplasmic core domain
C3Y97_04300	PF02687	FtsX-like permease family
C3Y97_04305	PF00005	ABC transporter
C3Y97_04315	PF09529	Integral membrane protein (intg_mem_TP0381)
C3Y97_04330	PF05525	Branched-chain amino acid transport protein
C3Y97_04335	PF05067	Manganese containing catalase
C3Y97_04340	PF12652	CotJB protein
C3Y97_04345	PF11007	Spore coat associated protein JA (CotJA)
C3Y97_04360	PF02735	Ku70/Ku80 beta-barrel domain
C3Y97_04370	PF09335	SNARE associated Golgi protein
C3Y97_04405	PF13520	Amino acid permease
C3Y97_04410	PF00999	Sodium/hydrogen exchanger family
C3Y97_04420	PF01380	SIS domain
C3Y97_04420	PF01418	Helix-turn-helix domain, rpiR family
C3Y97_04425	PF13580	SIS domain
C3Y97_04430	PF00367	phosphotransferase system, EIIB
C3Y97_04430	PF02378	Phosphotransferase system, EIIC 
C3Y97_04440	PF07681	DoxX
C3Y97_04455	PF00892	EamA-like transporter family
C3Y97_04460	PF01037	Lrp/AsnC ligand binding domain
C3Y97_04465	PF14698	Argininosuccinate lyase C-terminal
C3Y97_04465	PF00583	Acetyltransferase (GNAT) family
C3Y97_04465	PF00206	Lyase
C3Y97_04475	PF13411	MerR HTH family regulatory protein
C3Y97_04480	PF00893	Small Multidrug Resistance protein
C3Y97_04490	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_04490	PF17934	Tetracyclin repressor-like, C-terminal domain
C3Y97_04495	PF07690	Major Facilitator Superfamily
C3Y97_04500	PF01638	HxlR-like helix-turn-helix
C3Y97_04510	PF02525	Flavodoxin-like fold
C3Y97_04515	PF00005	ABC transporter
C3Y97_04540	PF01965	DJ-1/PfpI family
C3Y97_04545	PF18011	C-terminal domain found in long catalases
C3Y97_04545	PF06628	Catalase-related immune-responsive
C3Y97_04545	PF00199	Catalase
C3Y97_04555	PF13520	Amino acid permease
C3Y97_04560	PF01177	Asp/Glu/Hydantoin racemase
C3Y97_04570	PF00171	Aldehyde dehydrogenase family
C3Y97_04590	PF00664	ABC transporter transmembrane region
C3Y97_04590	PF00005	ABC transporter
C3Y97_04595	PF00005	ABC transporter
C3Y97_04595	PF00664	ABC transporter transmembrane region
C3Y97_04605	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3Y97_04610	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_04615	PF00005	ABC transporter
C3Y97_04620	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_04630	PF14398	YheC/D like ATP-grasp
C3Y97_04640	PF04286	Protein of unknown function (DUF445)
C3Y97_04645	PF06133	Control of competence regulator ComK, YlbF/YmcA
C3Y97_04660	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3Y97_04660	PF00205	Thiamine pyrophosphate enzyme, central domain
C3Y97_04660	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3Y97_04665	PF03306	Alpha-acetolactate decarboxylase
C3Y97_04670	PF02245	Methylpurine-DNA glycosylase (MPG)
C3Y97_04685	PF01510	N-acetylmuramoyl-L-alanine amidase
C3Y97_04685	PF01471	Putative peptidoglycan binding domain
C3Y97_04690	PF04055	Radical SAM superfamily
C3Y97_04700	PF00501	AMP-binding enzyme
C3Y97_04700	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_04715	PF00916	Sulfate permease family
C3Y97_04715	PF01740	STAS domain
C3Y97_04720	PF01943	Polysaccharide biosynthesis protein
C3Y97_04720	PF14667	Polysaccharide biosynthesis C-terminal domain
C3Y97_04740	PF00378	Enoyl-CoA hydratase/isomerase
C3Y97_04760	PF05343	M42 glutamyl aminopeptidase
C3Y97_04765	PF00395	S-layer homology domain
C3Y97_04765	PF01520	N-acetylmuramoyl-L-alanine amidase
C3Y97_04775	PF11121	Protein of unknown function (DUF2639)
C3Y97_04780	PF05544	Proline racemase
C3Y97_04785	PF02423	Ornithine cyclodeaminase/mu-crystallin family
C3Y97_04795	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_04800	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_04805	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_04805	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3Y97_04810	PF00005	ABC transporter
C3Y97_04810	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_04815	PF00005	ABC transporter
C3Y97_04815	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_04865	PF06013	Proteins of 100 residues with WXG
C3Y97_04880	PF14436	Bacterial EndoU nuclease
C3Y97_04880	PF04740	LXG domain of WXG superfamily
C3Y97_04935	PF00083	Sugar (and other) transporter
C3Y97_04940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_04940	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3Y97_04945	PF12431	Transcriptional regulator 
C3Y97_04945	PF00072	Response regulator receiver domain
C3Y97_04945	PF08279	HTH domain
C3Y97_04950	PF03401	Tripartite tricarboxylate transporter family receptor
C3Y97_05000	PF02384	N-6 DNA Methylase
C3Y97_05010	PF11867	Domain of unknown function (DUF3387)
C3Y97_05010	PF18766	SWI2/SNF2 ATPase
C3Y97_05010	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
C3Y97_05040	PF00772	DnaB-like helicase N terminal domain
C3Y97_05040	PF03796	DnaB-like helicase C terminal domain
C3Y97_05055	PF01925	Sulfite exporter TauE/SafE
C3Y97_05070	PF07690	Major Facilitator Superfamily
C3Y97_05080	PF09680	Family of unknown function
C3Y97_05100	PF13026	Protein of unknown function (DUF3887)
C3Y97_05100	PF12146	Serine aminopeptidase, S33
C3Y97_05150	PF01066	CDP-alcohol phosphatidyltransferase
C3Y97_05165	PF02733	Dak1 domain
C3Y97_05180	PF02733	Dak1 domain
C3Y97_05225	PF00395	S-layer homology domain
C3Y97_05260	PF11181	Heat induced stress protein YflT
C3Y97_05265	PF05532	CsbD-like
C3Y97_05280	PF01740	STAS domain
C3Y97_05285	PF13581	Histidine kinase-like ATPase domain
C3Y97_05290	PF04539	Sigma-70 region 3
C3Y97_05290	PF04542	Sigma-70 region 2 
C3Y97_05290	PF04545	Sigma-70, region 4
C3Y97_05300	PF13426	PAS domain
C3Y97_05300	PF07228	Stage II sporulation protein E (SpoIIE)
C3Y97_05305	PF03705	CheR methyltransferase, all-alpha domain
C3Y97_05305	PF01739	CheR methyltransferase, SAM binding domain
C3Y97_05310	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
C3Y97_05310	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_05310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_05310	PF00672	HAMP domain
C3Y97_05310	PF01627	Hpt domain
C3Y97_05310	PF00072	Response regulator receiver domain
C3Y97_05335	PF01906	Putative heavy-metal-binding
C3Y97_05350	PF00107	Zinc-binding dehydrogenase
C3Y97_05350	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_05355	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
C3Y97_05360	PF11121	Protein of unknown function (DUF2639)
C3Y97_05375	PF00149	Calcineurin-like phosphoesterase
C3Y97_05380	PF13514	AAA domain
C3Y97_05385	PF01966	HD domain
C3Y97_05385	PF01336	OB-fold nucleic acid binding domain
C3Y97_05395	PF01810	LysE type translocator
C3Y97_05400	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_05405	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_05410	PF18801	response regulator aspartate phosphatase H, N terminal
C3Y97_05420	PF00561	alpha/beta hydrolase fold
C3Y97_05420	PF08386	TAP-like protein
C3Y97_05425	PF14147	Sporulation protein YhaL
C3Y97_05440	PF00190	Cupin
C3Y97_05445	PF01381	Helix-turn-helix
C3Y97_05450	PF04309	Glycerol-3-phosphate responsive antiterminator
C3Y97_05455	PF00230	Major intrinsic protein
C3Y97_05460	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3Y97_05460	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3Y97_05465	PF01266	FAD dependent oxidoreductase
C3Y97_05465	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
C3Y97_05470	PF03551	Transcriptional regulator PadR-like family
C3Y97_05490	PF13538	UvrD-like helicase C-terminal domain
C3Y97_05520	PF01047	MarR family
C3Y97_05525	PF12732	YtxH-like protein
C3Y97_05530	PF01230	HIT domain
C3Y97_05540	PF00005	ABC transporter
C3Y97_05545	PF05975	Bacterial ABC transporter protein EcsB
C3Y97_05550	PF12787	EcsC protein family
C3Y97_05570	PF03703	Bacterial PH domain
C3Y97_05575	PF03703	Bacterial PH domain
C3Y97_05600	PF10014	2OG-Fe dioxygenase
C3Y97_05610	PF00892	EamA-like transporter family
C3Y97_05615	PF03703	Bacterial PH domain
C3Y97_05620	PF03703	Bacterial PH domain
C3Y97_05625	PF03992	Antibiotic biosynthesis monooxygenase
C3Y97_05630	PF00912	Transglycosylase
C3Y97_05630	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_05635	PF01208	Uroporphyrinogen decarboxylase (URO-D)
C3Y97_05670	PF03965	Penicillinase repressor
C3Y97_05680	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_05680	PF17932	Tetracyclin repressor-like, C-terminal domain
C3Y97_05715	PF13302	Acetyltransferase (GNAT) domain
C3Y97_05720	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_05725	PF14149	YhfH-like protein
C3Y97_05730	PF12706	Beta-lactamase superfamily domain
C3Y97_05735	PF03099	Biotin/lipoate A/B protein ligase family
C3Y97_05735	PF10437	Bacterial lipoate protein ligase C-terminus
C3Y97_05745	PF00501	AMP-binding enzyme
C3Y97_05745	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_05750	PF01520	N-acetylmuramoyl-L-alanine amidase
C3Y97_05750	PF00395	S-layer homology domain
C3Y97_05760	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_05765	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_05770	PF17850	CysA C-terminal regulatory domain
C3Y97_05770	PF00005	ABC transporter
C3Y97_05770	PF12857	TOBE-like domain
C3Y97_05775	PF07968	Leukocidin/Hemolysin toxin family
C3Y97_05785	PF00149	Calcineurin-like phosphoesterase
C3Y97_05790	PF01966	HD domain
C3Y97_05800	PF04542	Sigma-70 region 2 
C3Y97_05800	PF08281	Sigma-70, region 4
C3Y97_05805	PF12833	Helix-turn-helix domain
C3Y97_05805	PF06445	GyrI-like small molecule binding domain
C3Y97_05815	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_05815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_05820	PF00072	Response regulator receiver domain
C3Y97_05820	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_05840	PF16491	CAAX prenyl protease N-terminal, five membrane helices
C3Y97_05840	PF01435	Peptidase family M48
C3Y97_05845	PF00672	HAMP domain
C3Y97_05845	PF02743	Cache domain
C3Y97_05845	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_05850	PF06452	Carbohydrate family 9 binding domain-like
C3Y97_05850	PF02018	Carbohydrate binding domain
C3Y97_05850	PF00331	Glycosyl hydrolase family 10
C3Y97_05850	PF00395	S-layer homology domain
C3Y97_05860	PF01274	Malate synthase
C3Y97_05865	PF00463	Isocitrate lyase family
C3Y97_05880	PF00313	'Cold-shock' DNA-binding domain
C3Y97_05900	PF09335	SNARE associated Golgi protein
C3Y97_05905	PF10502	Signal peptidase, peptidase S26 
C3Y97_05910	PF12705	PD-(D/E)XK nuclease superfamily
C3Y97_05910	PF13361	UvrD-like helicase C-terminal domain
C3Y97_05915	PF13361	UvrD-like helicase C-terminal domain
C3Y97_05915	PF00580	UvrD/REP helicase N-terminal domain
C3Y97_05915	PF12705	PD-(D/E)XK nuclease superfamily
C3Y97_05925	PF10676	Spore germination protein gerPA/gerPF
C3Y97_05930	PF10970	Spore germination protein GerPE 
C3Y97_05940	PF10737	Spore germination protein GerPC
C3Y97_05945	PF10803	Spore germination GerPB
C3Y97_05950	PF10676	Spore germination protein gerPA/gerPF
C3Y97_05955	PF09388	Spo0E like sporulation regulatory protein
C3Y97_05960	PF01557	Fumarylacetoacetate (FAA) hydrolase family
C3Y97_05970	PF00202	Aminotransferase class-III
C3Y97_05975	PF07457	Protein of unknown function (DUF1516)
C3Y97_05985	PF00733	Asparagine synthase
C3Y97_05985	PF13537	Glutamine amidotransferase domain
C3Y97_05995	PF06628	Catalase-related immune-responsive
C3Y97_05995	PF00199	Catalase
C3Y97_06000	PF00909	Ammonium Transporter Family
C3Y97_06005	PF00128	Alpha amylase, catalytic domain
C3Y97_06020	PF04461	Protein of unknown function (DUF520)
C3Y97_06025	PF13509	S1 domain
C3Y97_06025	PF17783	CvfB-like winged helix domain
C3Y97_06040	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_06040	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_06045	PF12758	Protein of unknown function (DUF3813)
C3Y97_06065	PF14168	YjzC-like protein
C3Y97_06070	PF02861	Clp amino terminal domain, pathogenicity island component
C3Y97_06070	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3Y97_06070	PF00004	ATPase family associated with various cellular activities (AAA)
C3Y97_06070	PF07724	AAA domain (Cdc48 subfamily)
C3Y97_06070	PF17871	AAA lid domain
C3Y97_06090	PF10815	ComZ
C3Y97_06095	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3Y97_06095	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3Y97_06100	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3Y97_06100	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3Y97_06105	PF10026	Predicted Zn-dependent protease (DUF2268)
C3Y97_06110	PF12227	Protein of unknown function (DUF3603)
C3Y97_06115	PF00579	tRNA synthetases class I (W and Y)
C3Y97_06130	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_06135	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_06140	PF12911	N-terminal TM domain of oligopeptide transport permease C
C3Y97_06140	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_06145	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_06145	PF00005	ABC transporter
C3Y97_06150	PF00005	ABC transporter
C3Y97_06150	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
C3Y97_06155	PF01554	MatE
C3Y97_06160	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_06175	PF03960	ArsC family
C3Y97_06180	PF03741	Integral membrane protein TerC family
C3Y97_06185	PF05389	Negative regulator of genetic competence (MecA)
C3Y97_06190	PF13396	Phospholipase_D-nuclease N-terminal
C3Y97_06190	PF13091	PLD-like domain
C3Y97_06200	PF08439	Oligopeptidase F
C3Y97_06200	PF01432	Peptidase family M3
C3Y97_06215	PF01152	Bacterial-like globin
C3Y97_06220	PF01928	CYTH domain
C3Y97_06230	PF04607	Region found in RelA / SpoT proteins
C3Y97_06235	PF01513	ATP-NAD kinase
C3Y97_06240	PF00849	RNA pseudouridylate synthase
C3Y97_06250	PF00149	Calcineurin-like phosphoesterase
C3Y97_06255	PF01098	Cell cycle protein
C3Y97_06260	PF00535	Glycosyl transferase family 2
C3Y97_06265	PF08241	Methyltransferase domain
C3Y97_06270	PF05711	Macrocin-O-methyltransferase (TylF)
C3Y97_06285	PF13181	Tetratricopeptide repeat
C3Y97_06285	PF00535	Glycosyl transferase family 2
C3Y97_06305	PF00483	Nucleotidyl transferase
C3Y97_06310	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
C3Y97_06315	PF16363	GDP-mannose 4,6 dehydratase
C3Y97_06320	PF04321	RmlD substrate binding domain
C3Y97_06340	PF07098	Protein of unknown function (DUF1360)
C3Y97_06360	PF13361	UvrD-like helicase C-terminal domain
C3Y97_06360	PF00580	UvrD/REP helicase N-terminal domain
C3Y97_06365	PF13673	Acetyltransferase (GNAT) domain
C3Y97_06375	PF00756	Putative esterase
C3Y97_06390	PF02368	Bacterial Ig-like domain (group 2)
C3Y97_06395	PF00474	Sodium:solute symporter family
C3Y97_06410	PF00591	Glycosyl transferase family, a/b domain
C3Y97_06410	PF00117	Glutamine amidotransferase class-I
C3Y97_06410	PF02885	Glycosyl transferase family, helical bundle domain
C3Y97_06415	PF00591	Glycosyl transferase family, a/b domain
C3Y97_06415	PF02885	Glycosyl transferase family, helical bundle domain
C3Y97_06420	PF00218	Indole-3-glycerol phosphate synthase
C3Y97_06425	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
C3Y97_06430	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_06435	PF00290	Tryptophan synthase alpha chain
C3Y97_06445	PF02652	L-lactate permease
C3Y97_06450	PF10042	Uncharacterized conserved protein (DUF2278)
C3Y97_06480	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_06480	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3Y97_06490	PF00881	Nitroreductase family
C3Y97_06505	PF02817	e3 binding domain
C3Y97_06505	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3Y97_06505	PF00364	Biotin-requiring enzyme
C3Y97_06510	PF02779	Transketolase, pyrimidine binding domain
C3Y97_06510	PF00676	Dehydrogenase E1 component
C3Y97_06510	PF16870	2-oxoglutarate dehydrogenase C-terminal
C3Y97_06565	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_06565	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_06575	PF12389	Camelysin metallo-endopeptidase
C3Y97_06585	PF12389	Camelysin metallo-endopeptidase
C3Y97_06590	PF08671	Anti-repressor SinI
C3Y97_06590	PF01381	Helix-turn-helix
C3Y97_06600	PF05547	Immune inhibitor A peptidase M6
C3Y97_06605	PF00171	Aldehyde dehydrogenase family
C3Y97_06610	PF08402	TOBE domain
C3Y97_06610	PF00005	ABC transporter
C3Y97_06615	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_06620	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_06625	PF13416	Bacterial extracellular solute-binding protein
C3Y97_06630	PF01569	PAP2 superfamily
C3Y97_06635	PF03176	MMPL family
C3Y97_06645	PF01479	S4 domain
C3Y97_06645	PF00849	RNA pseudouridylate synthase
C3Y97_06655	PF00188	Cysteine-rich secretory protein family
C3Y97_06660	PF02754	Cysteine-rich domain
C3Y97_06660	PF13183	4Fe-4S dicluster domain
C3Y97_06665	PF01565	FAD binding domain 
C3Y97_06665	PF02913	FAD linked oxidases, C-terminal domain
C3Y97_06670	PF17853	GGDEF-like domain
C3Y97_06670	PF05651	Putative sugar diacid recognition
C3Y97_06670	PF13556	PucR C-terminal helix-turn-helix domain
C3Y97_06680	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_06680	PF00072	Response regulator receiver domain
C3Y97_06685	PF00989	PAS fold
C3Y97_06685	PF00672	HAMP domain
C3Y97_06685	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_06685	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_06685	PF18698	Histidine kinase sensor domain
C3Y97_06690	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_06690	PF07729	FCD domain
C3Y97_06695	PF02754	Cysteine-rich domain
C3Y97_06700	PF02589	LUD domain
C3Y97_06700	PF13183	4Fe-4S dicluster domain
C3Y97_06700	PF11870	Domain of unknown function (DUF3390)
C3Y97_06705	PF02589	LUD domain
C3Y97_06710	PF06750	Bacterial Peptidase A24 N-terminal domain
C3Y97_06710	PF01478	Type IV leader peptidase family
C3Y97_06720	PF01226	Formate/nitrite transporter
C3Y97_06725	PF03741	Integral membrane protein TerC family
C3Y97_06730	PF02386	Cation transport protein
C3Y97_06735	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_06740	PF01575	MaoC like domain
C3Y97_06765	PF00561	alpha/beta hydrolase fold
C3Y97_06775	PF02386	Cation transport protein
C3Y97_06800	PF00005	ABC transporter
C3Y97_06800	PF08402	TOBE domain
C3Y97_06805	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_06810	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_06815	PF00266	Aminotransferase class-V
C3Y97_06825	PF00455	DeoR C terminal sensor domain
C3Y97_06825	PF08220	DeoR-like helix-turn-helix domain
C3Y97_06840	PF00596	Class II Aldolase and Adducin N-terminal domain
C3Y97_06850	PF04748	Divergent polysaccharide deacetylase
C3Y97_06855	PF09388	Spo0E like sporulation regulatory protein
C3Y97_06860	PF02743	Cache domain
C3Y97_06860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_06860	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_06865	PF01047	MarR family
C3Y97_06875	PF12867	DinB superfamily
C3Y97_06885	PF00989	PAS fold
C3Y97_06885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_06885	PF13426	PAS domain
C3Y97_06885	PF13188	PAS domain
C3Y97_06885	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_06890	PF06508	Queuosine biosynthesis protein QueC
C3Y97_06895	PF01242	6-pyruvoyl tetrahydropterin synthase
C3Y97_06900	PF04055	Radical SAM superfamily
C3Y97_06905	PF14489	QueF-like protein
C3Y97_06910	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
C3Y97_06945	PF07972	NrdI Flavodoxin like 
C3Y97_06950	PF08343	Ribonucleotide reductase N-terminal
C3Y97_06950	PF00317	Ribonucleotide reductase, all-alpha domain
C3Y97_06950	PF02867	Ribonucleotide reductase, barrel domain
C3Y97_06955	PF00268	Ribonucleotide reductase, small chain
C3Y97_06960	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_06965	PF00005	ABC transporter
C3Y97_06975	PF00005	ABC transporter
C3Y97_06995	PF01037	Lrp/AsnC ligand binding domain
C3Y97_07005	PF00857	Isochorismatase family
C3Y97_07015	PF02016	LD-carboxypeptidase N-terminal domain
C3Y97_07015	PF17676	LD-carboxypeptidase C-terminal domain
C3Y97_07020	PF03060	Nitronate monooxygenase
C3Y97_07025	PF04914	DltD protein
C3Y97_07030	PF00550	Phosphopantetheine attachment site
C3Y97_07035	PF03062	MBOAT, membrane-bound O-acyltransferase family
C3Y97_07040	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_07040	PF00501	AMP-binding enzyme
C3Y97_07050	PF07687	Peptidase dimerisation domain
C3Y97_07050	PF01546	Peptidase family M20/M25/M40
C3Y97_07060	PF00258	Flavodoxin
C3Y97_07075	PF01636	Phosphotransferase enzyme family
C3Y97_07100	PF01554	MatE
C3Y97_07105	PF02673	Bacitracin resistance protein BacA
C3Y97_07120	PF01047	MarR family
C3Y97_07130	PF00375	Sodium:dicarboxylate symporter family
C3Y97_07135	PF02386	Cation transport protein
C3Y97_07145	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
C3Y97_07160	PF03698	Uncharacterised protein family (UPF0180)
C3Y97_07175	PF01063	Amino-transferase class IV
C3Y97_07180	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3Y97_07180	PF00205	Thiamine pyrophosphate enzyme, central domain
C3Y97_07180	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3Y97_07185	PF01842	ACT domain
C3Y97_07185	PF10369	Small subunit of acetolactate synthase
C3Y97_07190	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
C3Y97_07190	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
C3Y97_07195	PF00682	HMGL-like
C3Y97_07195	PF08502	LeuA allosteric (dimerisation) domain
C3Y97_07200	PF00180	Isocitrate/isopropylmalate dehydrogenase
C3Y97_07205	PF00330	Aconitase family (aconitate hydratase)
C3Y97_07210	PF00694	Aconitase C-terminal domain
C3Y97_07215	PF13393	Histidyl-tRNA synthetase
C3Y97_07220	PF01634	ATP phosphoribosyltransferase
C3Y97_07225	PF00815	Histidinol dehydrogenase
C3Y97_07230	PF00475	Imidazoleglycerol-phosphate dehydratase
C3Y97_07235	PF00117	Glutamine amidotransferase class-I
C3Y97_07240	PF00977	Histidine biosynthesis protein
C3Y97_07245	PF00977	Histidine biosynthesis protein
C3Y97_07250	PF01502	Phosphoribosyl-AMP cyclohydrolase
C3Y97_07255	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
C3Y97_07260	PF02811	PHP domain
C3Y97_07270	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3Y97_07270	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3Y97_07275	PF01066	CDP-alcohol phosphatidyltransferase
C3Y97_07280	PF00884	Sulfatase
C3Y97_07290	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
C3Y97_07290	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
C3Y97_07300	PF01507	Phosphoadenosine phosphosulfate reductase family
C3Y97_07305	PF01747	ATP-sulfurylase
C3Y97_07305	PF14306	PUA-like domain
C3Y97_07315	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
C3Y97_07315	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
C3Y97_07325	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3Y97_07330	PF01903	CbiX
C3Y97_07345	PF00209	Sodium:neurotransmitter symporter family
C3Y97_07355	PF00375	Sodium:dicarboxylate symporter family
C3Y97_07365	PF03553	Na+/H+ antiporter family
C3Y97_07380	PF09922	Cell wall-active antibiotics response 4TMS YvqF
C3Y97_07385	PF07730	Histidine kinase
C3Y97_07385	PF00672	HAMP domain
C3Y97_07385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_07390	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_07390	PF00072	Response regulator receiver domain
C3Y97_07400	PF05525	Branched-chain amino acid transport protein
C3Y97_07410	PF01209	ubiE/COQ5 methyltransferase family
C3Y97_07435	PF00175	Oxidoreductase NAD-binding domain 
C3Y97_07435	PF00042	Globin
C3Y97_07435	PF00970	Oxidoreductase FAD-binding domain
C3Y97_07455	PF01925	Sulfite exporter TauE/SafE
C3Y97_07460	PF01384	Phosphate transporter family
C3Y97_07465	PF01865	Protein of unknown function DUF47
C3Y97_07470	PF00912	Transglycosylase
C3Y97_07470	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_07485	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_07485	PF00989	PAS fold
C3Y97_07485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_07490	PF01904	Protein of unknown function DUF72
C3Y97_07500	PF00589	Phage integrase family
C3Y97_07505	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_07505	PF16736	Single Cache-like 
C3Y97_07505	PF00989	PAS fold
C3Y97_07505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_07510	PF01048	Phosphorylase superfamily
C3Y97_07520	PF03706	Lysylphosphatidylglycerol synthase TM region
C3Y97_07520	PF09924	Uncharacterised conserved protein (DUF2156)
C3Y97_07535	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3Y97_07535	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3Y97_07540	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_07540	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_07545	PF07670	Nucleoside recognition
C3Y97_07550	PF07670	Nucleoside recognition
C3Y97_07555	PF01479	S4 domain
C3Y97_07555	PF00849	RNA pseudouridylate synthase
C3Y97_07560	PF00578	AhpC/TSA family
C3Y97_07565	PF05140	ResB-like family 
C3Y97_07570	PF01578	Cytochrome C assembly protein
C3Y97_07575	PF00072	Response regulator receiver domain
C3Y97_07575	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_07580	PF18698	Histidine kinase sensor domain
C3Y97_07580	PF00989	PAS fold
C3Y97_07580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_07580	PF00672	HAMP domain
C3Y97_07580	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_07585	PF01923	Cobalamin adenosyltransferase
C3Y97_07600	PF12822	ECF transporter, substrate-specific component
C3Y97_07615	PF00271	Helicase conserved C-terminal domain
C3Y97_07615	PF00270	DEAD/DEAH box helicase
C3Y97_07620	PF02517	CPBP intramembrane metalloprotease
C3Y97_07630	PF00149	Calcineurin-like phosphoesterase
C3Y97_07635	PF13411	MerR HTH family regulatory protein
C3Y97_07640	PF05389	Negative regulator of genetic competence (MecA)
C3Y97_07645	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C3Y97_07645	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
C3Y97_07670	PF00710	Asparaginase, N-terminal
C3Y97_07670	PF17763	Glutaminase/Asparaginase C-terminal domain
C3Y97_07680	PF02224	Cytidylate kinase
C3Y97_07685	PF00575	S1 RNA binding domain
C3Y97_07690	PF01070	FMN-dependent dehydrogenase
C3Y97_07695	PF14140	YpzI-like protein
C3Y97_07705	PF14045	YIEGIA protein
C3Y97_07715	PF01926	50S ribosome-binding GTPase
C3Y97_07715	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
C3Y97_07720	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
C3Y97_07720	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
C3Y97_07730	PF10966	Protein of unknown function (DUF2768)
C3Y97_07740	PF09547	Stage IV sporulation protein A (spore_IV_A)
C3Y97_07745	PF00216	Bacterial DNA-binding protein
C3Y97_07750	PF01227	GTP cyclohydrolase I
C3Y97_07755	PF07307	Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
C3Y97_07760	PF01209	ubiE/COQ5 methyltransferase family
C3Y97_07765	PF00348	Polyprenyl synthetase
C3Y97_07770	PF00334	Nucleoside diphosphate kinase
C3Y97_07775	PF01264	Chorismate synthase
C3Y97_07780	PF01761	3-dehydroquinate synthase
C3Y97_07785	PF00155	Aminotransferase class I and II
C3Y97_07795	PF08864	UPF0302 domain
C3Y97_07795	PF08858	IDEAL domain
C3Y97_07800	PF10673	Protein of unknown function (DUF2487)
C3Y97_07805	PF00355	Rieske [2Fe-2S] domain
C3Y97_07810	PF00033	Cytochrome b/b6/petB
C3Y97_07815	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3Y97_07815	PF00032	Cytochrome b(C-terminal)/b6/petD
C3Y97_07820	PF07187	Protein of unknown function (DUF1405)
C3Y97_07830	PF09577	Sporulation protein YpjB (SpoYpjB)
C3Y97_07835	PF04298	Putative neutral zinc metallopeptidase
C3Y97_07845	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_07845	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_07855	PF03819	MazG nucleotide pyrophosphohydrolase domain
C3Y97_07860	PF01113	Dihydrodipicolinate reductase, N-terminus
C3Y97_07860	PF05173	Dihydrodipicolinate reductase, C-terminus
C3Y97_07865	PF02142	MGS-like domain
C3Y97_07870	PF02585	GlcNAc-PI de-N-acetylase
C3Y97_07875	PF13439	Glycosyltransferase Family 4
C3Y97_07875	PF00534	Glycosyl transferases group 1
C3Y97_07880	PF01743	Poly A polymerase head domain
C3Y97_07880	PF13735	tRNA nucleotidyltransferase domain 2 putative
C3Y97_07880	PF12627	Probable RNA and SrmB- binding site of polymerase A
C3Y97_07885	PF02237	Biotin protein ligase C terminal domain
C3Y97_07885	PF03099	Biotin/lipoate A/B protein ligase family
C3Y97_07885	PF08279	HTH domain
C3Y97_07900	PF02548	Ketopantoate hydroxymethyltransferase
C3Y97_07905	PF02569	Pantoate-beta-alanine ligase
C3Y97_07910	PF02261	Aspartate decarboxylase
C3Y97_07915	PF00929	Exonuclease
C3Y97_07915	PF04851	Type III restriction enzyme, res subunit
C3Y97_07915	PF13307	Helicase C-terminal domain
C3Y97_07920	PF14084	Protein of unknown function (DUF4264)
C3Y97_07930	PF00155	Aminotransferase class I and II
C3Y97_07935	PF07261	Replication initiation and membrane attachment
C3Y97_07940	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3Y97_07940	PF00633	Helix-hairpin-helix motif
C3Y97_07940	PF10576	Iron-sulfur binding domain of endonuclease III
C3Y97_07950	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_07950	PF00912	Transglycosylase
C3Y97_07955	PF03838	Recombination protein U
C3Y97_07960	PF10720	Protein of unknown function (DUF2515)
C3Y97_07995	PF06908	YspA SLOG family
C3Y97_08000	PF05103	DivIVA protein
C3Y97_08010	PF02926	THUMP domain
C3Y97_08010	PF01170	Putative RNA methylase family UPF0020
C3Y97_08020	PF13307	Helicase C-terminal domain
C3Y97_08025	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
C3Y97_08035	PF00557	Metallopeptidase family M24
C3Y97_08040	PF00156	Phosphoribosyl transferase domain
C3Y97_08045	PF00860	Permease family
C3Y97_08050	PF04235	Protein of unknown function (DUF418)
C3Y97_08060	PF00350	Dynamin family
C3Y97_08070	PF00583	Acetyltransferase (GNAT) family
C3Y97_08075	PF10752	Protein of unknown function (DUF2533) 
C3Y97_08080	PF00581	Rhodanese-like domain
C3Y97_08120	PF00689	Cation transporting ATPase, C-terminus
C3Y97_08120	PF00690	Cation transporter/ATPase, N-terminus
C3Y97_08125	PF01367	5'-3' exonuclease, C-terminal SAM fold
C3Y97_08125	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
C3Y97_08140	PF13807	G-rich domain on putative tyrosine kinase
C3Y97_08140	PF02706	Chain length determinant protein
C3Y97_08150	PF02397	Bacterial sugar transferase
C3Y97_08165	PF00535	Glycosyl transferase family 2
C3Y97_08170	PF13439	Glycosyltransferase Family 4
C3Y97_08170	PF00534	Glycosyl transferases group 1
C3Y97_08185	PF13673	Acetyltransferase (GNAT) domain
C3Y97_08185	PF18014	Acetyltransferase (GNAT) domain
C3Y97_08205	PF13456	Reverse transcriptase-like
C3Y97_08210	PF01263	Aldose 1-epimerase
C3Y97_08235	PF00313	'Cold-shock' DNA-binding domain
C3Y97_08240	PF08892	YqcI/YcgG family
C3Y97_08245	PF01810	LysE type translocator
C3Y97_08265	PF00474	Sodium:solute symporter family
C3Y97_08270	PF00202	Aminotransferase class-III
C3Y97_08280	PF00999	Sodium/hydrogen exchanger family
C3Y97_08285	PF00753	Metallo-beta-lactamase superfamily
C3Y97_08285	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
C3Y97_08285	PF17770	Ribonuclease J C-terminal domain
C3Y97_08290	PF06445	GyrI-like small molecule binding domain
C3Y97_08290	PF13411	MerR HTH family regulatory protein
C3Y97_08300	PF04239	Protein of unknown function (DUF421)
C3Y97_08305	PF02698	DUF218 domain
C3Y97_08315	PF00881	Nitroreductase family
C3Y97_08340	PF17209	Hfq protein
C3Y97_08350	PF01618	MotA/TolQ/ExbB proton channel family
C3Y97_08355	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
C3Y97_08355	PF00691	OmpA family
C3Y97_08360	PF00072	Response regulator receiver domain
C3Y97_08365	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_08365	PF02895	Signal transducing histidine kinase, homodimeric domain
C3Y97_08365	PF07194	P2 response regulator binding domain
C3Y97_08365	PF01627	Hpt domain
C3Y97_08365	PF01584	CheW-like domain
C3Y97_08370	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3Y97_08370	PF04509	CheC-like family
C3Y97_08385	PF01739	CheR methyltransferase, SAM binding domain
C3Y97_08385	PF03705	CheR methyltransferase, all-alpha domain
C3Y97_08405	PF00460	Flagella basal body rod protein
C3Y97_08405	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3Y97_08410	PF00700	Bacterial flagellin C-terminal helical region
C3Y97_08410	PF00669	Bacterial flagellin N-terminal helical region
C3Y97_08430	PF00460	Flagella basal body rod protein
C3Y97_08435	PF00460	Flagella basal body rod protein
C3Y97_08435	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3Y97_08440	PF02049	Flagellar hook-basal body complex protein FliE
C3Y97_08445	PF01514	Secretory protein of YscJ/FliF family
C3Y97_08445	PF08345	Flagellar M-ring protein C-terminal
C3Y97_08450	PF01706	FliG C-terminal domain
C3Y97_08450	PF14841	FliG middle domain
C3Y97_08450	PF14842	FliG N-terminal domain
C3Y97_08460	PF18269	T3SS EscN ATPase C-terminal domain
C3Y97_08460	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3Y97_08460	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3Y97_08480	PF07559	Flagellar basal body protein FlaE
C3Y97_08480	PF00460	Flagella basal body rod protein
C3Y97_08480	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3Y97_08495	PF00072	Response regulator receiver domain
C3Y97_08495	PF01584	CheW-like domain
C3Y97_08505	PF12181	DNA binding domain of the motility gene repressor (MogR)
C3Y97_08510	PF00669	Bacterial flagellin N-terminal helical region
C3Y97_08510	PF00700	Bacterial flagellin C-terminal helical region
C3Y97_08515	PF00700	Bacterial flagellin C-terminal helical region
C3Y97_08515	PF00669	Bacterial flagellin N-terminal helical region
C3Y97_08520	PF01464	Transglycosylase SLT domain
C3Y97_08530	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3Y97_08530	PF02154	Flagellar motor switch protein FliM
C3Y97_08535	PF04509	CheC-like family
C3Y97_08535	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
C3Y97_08545	PF00813	FliP family
C3Y97_08550	PF01313	Bacterial export proteins, family 3
C3Y97_08560	PF01312	FlhB HrpN YscU SpaS Family
C3Y97_08565	PF00771	FHIPEP family
C3Y97_08570	PF00448	SRP54-type protein, GTPase domain
C3Y97_08575	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
C3Y97_08575	PF00460	Flagella basal body rod protein
C3Y97_08580	PF01411	tRNA synthetases class II (A)
C3Y97_08580	PF02272	DHHA1 domain
C3Y97_08580	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3Y97_08615	PF03992	Antibiotic biosynthesis monooxygenase
C3Y97_08620	PF08141	Small acid-soluble spore protein H family
C3Y97_08645	PF08402	TOBE domain
C3Y97_08645	PF00005	ABC transporter
C3Y97_08655	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_08670	PF10787	Uncharacterised protein from bacillus cereus group
C3Y97_08690	PF00300	Histidine phosphatase superfamily (branch 1)
C3Y97_08700	PF00561	alpha/beta hydrolase fold
C3Y97_08710	PF01047	MarR family
C3Y97_08720	PF00733	Asparagine synthase
C3Y97_08720	PF13537	Glutamine amidotransferase domain
C3Y97_08740	PF01545	Cation efflux family
C3Y97_08740	PF16916	Dimerisation domain of Zinc Transporter
C3Y97_08750	PF07729	FCD domain
C3Y97_08750	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_08755	PF00892	EamA-like transporter family
C3Y97_08765	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3Y97_08765	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3Y97_08770	PF03773	Predicted permease
C3Y97_08785	PF03553	Na+/H+ antiporter family
C3Y97_08790	PF13411	MerR HTH family regulatory protein
C3Y97_08800	PF00206	Lyase
C3Y97_08800	PF10415	Fumarase C C-terminus
C3Y97_08820	PF01554	MatE
C3Y97_08825	PF03575	Peptidase family S51
C3Y97_08845	PF02683	Cytochrome C biogenesis protein transmembrane region
C3Y97_08850	PF00578	AhpC/TSA family
C3Y97_08860	PF18801	response regulator aspartate phosphatase H, N terminal
C3Y97_08875	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_08880	PF04286	Protein of unknown function (DUF445)
C3Y97_08910	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_08910	PF00072	Response regulator receiver domain
C3Y97_08915	PF07730	Histidine kinase
C3Y97_08915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_08915	PF13492	GAF domain
C3Y97_08915	PF13185	GAF domain
C3Y97_08920	PF00005	ABC transporter
C3Y97_08935	PF13091	PLD-like domain
C3Y97_08940	PF00696	Amino acid kinase family
C3Y97_08945	PF00375	Sodium:dicarboxylate symporter family
C3Y97_08950	PF00206	Lyase
C3Y97_08950	PF10415	Fumarase C C-terminus
C3Y97_08955	PF03949	Malic enzyme, NAD binding domain
C3Y97_08955	PF00390	Malic enzyme, N-terminal domain
C3Y97_08960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_08965	PF08664	YcbB domain
C3Y97_08965	PF00072	Response regulator receiver domain
C3Y97_08970	PF00176	SNF2 family N-terminal domain
C3Y97_08970	PF00271	Helicase conserved C-terminal domain
C3Y97_08970	PF04434	SWIM zinc finger
C3Y97_08990	PF03590	Aspartate-ammonia ligase
C3Y97_09000	PF00696	Amino acid kinase family
C3Y97_09000	PF13840	ACT domain 
C3Y97_09020	PF14158	YndJ-like protein
C3Y97_09025	PF09297	NADH pyrophosphatase zinc ribbon domain
C3Y97_09025	PF00293	NUDIX domain
C3Y97_09030	PF07690	Major Facilitator Superfamily
C3Y97_09045	PF03976	Polyphosphate kinase 2 (PPK2)
C3Y97_09050	PF10400	Virulence activator alpha C-term
C3Y97_09050	PF03551	Transcriptional regulator PadR-like family
C3Y97_09055	PF07690	Major Facilitator Superfamily
C3Y97_09065	PF07690	Major Facilitator Superfamily
C3Y97_09070	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
C3Y97_09070	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
C3Y97_09080	PF01926	50S ribosome-binding GTPase
C3Y97_09080	PF13167	GTP-binding GTPase N-terminal
C3Y97_09080	PF16360	GTP-binding GTPase Middle Region
C3Y97_09085	PF07690	Major Facilitator Superfamily
C3Y97_09090	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_09110	PF00209	Sodium:neurotransmitter symporter family
C3Y97_09115	PF03422	Carbohydrate binding module (family 6)
C3Y97_09115	PF00457	Glycosyl hydrolases family 11
C3Y97_09115	PF01522	Polysaccharide deacetylase
C3Y97_09125	PF04239	Protein of unknown function (DUF421)
C3Y97_09155	PF01625	Peptide methionine sulfoxide reductase
C3Y97_09165	PF01063	Amino-transferase class IV
C3Y97_09170	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3Y97_09170	PF00205	Thiamine pyrophosphate enzyme, central domain
C3Y97_09170	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3Y97_09180	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
C3Y97_09180	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
C3Y97_09185	PF00920	Dehydratase family
C3Y97_09190	PF00585	C-terminal regulatory domain of Threonine dehydratase
C3Y97_09190	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_09200	PF09587	Bacterial capsule synthesis protein PGA_cap
C3Y97_09215	PF07690	Major Facilitator Superfamily
C3Y97_09220	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
C3Y97_09230	PF04397	LytTr DNA-binding domain
C3Y97_09230	PF00072	Response regulator receiver domain
C3Y97_09235	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
C3Y97_09235	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
C3Y97_09250	PF01979	Amidohydrolase family
C3Y97_09255	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_09260	PF13302	Acetyltransferase (GNAT) domain
C3Y97_09265	PF01566	Natural resistance-associated macrophage protein
C3Y97_09280	PF08546	Ketopantoate reductase PanE/ApbA C terminal
C3Y97_09280	PF02558	Ketopantoate reductase PanE/ApbA
C3Y97_09285	PF13520	Amino acid permease
C3Y97_09300	PF05791	Bacillus haemolytic enterotoxin (HBL)
C3Y97_09305	PF05791	Bacillus haemolytic enterotoxin (HBL)
C3Y97_09310	PF02073	Thermophilic metalloprotease (M29)
C3Y97_09325	PF00583	Acetyltransferase (GNAT) family
C3Y97_09335	PF01906	Putative heavy-metal-binding
C3Y97_09345	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_09350	PF04198	Putative sugar-binding domain
C3Y97_09355	PF01791	DeoC/LacD family aldolase
C3Y97_09360	PF07662	Na+ dependent nucleoside transporter C-terminus
C3Y97_09360	PF01773	Na+ dependent nucleoside transporter N-terminus
C3Y97_09365	PF02885	Glycosyl transferase family, helical bundle domain
C3Y97_09365	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
C3Y97_09365	PF00591	Glycosyl transferase family, a/b domain
C3Y97_09370	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3Y97_09375	PF07301	Protein of unknown function (DUF1453)
C3Y97_09380	PF05979	Bacterial protein of unknown function (DUF896)
C3Y97_09395	PF03466	LysR substrate binding domain
C3Y97_09395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_09410	PF05195	Aminopeptidase P, N-terminal domain
C3Y97_09410	PF00557	Metallopeptidase family M24
C3Y97_09420	PF00394	Multicopper oxidase
C3Y97_09420	PF07732	Multicopper oxidase
C3Y97_09420	PF07731	Multicopper oxidase
C3Y97_09450	PF02525	Flavodoxin-like fold
C3Y97_09455	PF05525	Branched-chain amino acid transport protein
C3Y97_09460	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_09465	PF05425	Copper resistance protein D
C3Y97_09465	PF04234	CopC domain
C3Y97_09465	PF13115	YtkA-like
C3Y97_09470	PF07987	Domain of unkown function (DUF1775)
C3Y97_09475	PF00892	EamA-like transporter family
C3Y97_09480	PF03466	LysR substrate binding domain
C3Y97_09480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_09485	PF02082	Transcriptional regulator
C3Y97_09490	PF01323	DSBA-like thioredoxin domain
C3Y97_09495	PF00881	Nitroreductase family
C3Y97_09505	PF01425	Amidase
C3Y97_09510	PF01594	AI-2E family transporter
C3Y97_09515	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3Y97_09515	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3Y97_09520	PF01593	Flavin containing amine oxidoreductase
C3Y97_09530	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3Y97_09530	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3Y97_09540	PF12399	Branched-chain amino acid ATP-binding cassette transporter
C3Y97_09540	PF00005	ABC transporter
C3Y97_09545	PF00005	ABC transporter
C3Y97_09550	PF02653	Branched-chain amino acid transport system / permease component
C3Y97_09560	PF03466	LysR substrate binding domain
C3Y97_09560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_09570	PF14552	Tautomerase enzyme
C3Y97_09580	PF01047	MarR family
C3Y97_09590	PF01654	Cytochrome bd terminal oxidase subunit I
C3Y97_09595	PF02322	Cytochrome bd terminal oxidase subunit II
C3Y97_09600	PF00005	ABC transporter
C3Y97_09600	PF00664	ABC transporter transmembrane region
C3Y97_09605	PF00005	ABC transporter
C3Y97_09605	PF00664	ABC transporter transmembrane region
C3Y97_09615	PF00535	Glycosyl transferase family 2
C3Y97_09620	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
C3Y97_09625	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_09650	PF17676	LD-carboxypeptidase C-terminal domain
C3Y97_09650	PF02016	LD-carboxypeptidase N-terminal domain
C3Y97_09655	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_09655	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_09670	PF01476	LysM domain
C3Y97_09670	PF00877	NlpC/P60 family
C3Y97_09680	PF00664	ABC transporter transmembrane region
C3Y97_09680	PF00005	ABC transporter
C3Y97_09685	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_09685	PF00072	Response regulator receiver domain
C3Y97_09690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_09690	PF16736	Single Cache-like 
C3Y97_09690	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_09690	PF00989	PAS fold
C3Y97_09695	PF00106	short chain dehydrogenase
C3Y97_09700	PF04439	Streptomycin adenylyltransferase
C3Y97_09705	PF18627	Peptidoglycan GlcNAc deacetylase N-terminal domain
C3Y97_09705	PF01522	Polysaccharide deacetylase
C3Y97_09725	PF03447	Homoserine dehydrogenase, NAD binding domain
C3Y97_09725	PF00742	Homoserine dehydrogenase
C3Y97_09725	PF01842	ACT domain
C3Y97_09730	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_09735	PF08544	GHMP kinases C terminal 
C3Y97_09735	PF00288	GHMP kinases N terminal domain
C3Y97_09750	PF03816	Cell envelope-related transcriptional attenuator domain
C3Y97_09760	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_09760	PF00072	Response regulator receiver domain
C3Y97_09765	PF00989	PAS fold
C3Y97_09765	PF16736	Single Cache-like 
C3Y97_09765	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_09765	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_09770	PF01522	Polysaccharide deacetylase
C3Y97_09780	PF02308	MgtC family
C3Y97_09795	PF00583	Acetyltransferase (GNAT) family
C3Y97_09800	PF06276	Ferric iron reductase FhuF-like transporter
C3Y97_09800	PF04183	IucA / IucC family
C3Y97_09805	PF06276	Ferric iron reductase FhuF-like transporter
C3Y97_09805	PF04183	IucA / IucC family
C3Y97_09810	PF00501	AMP-binding enzyme
C3Y97_09810	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_09825	PF01261	Xylose isomerase-like TIM barrel
C3Y97_09830	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_09835	PF07690	Major Facilitator Superfamily
C3Y97_09840	PF01810	LysE type translocator
C3Y97_09845	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_09845	PF00155	Aminotransferase class I and II
C3Y97_09855	PF01734	Patatin-like phospholipase
C3Y97_09880	PF00293	NUDIX domain
C3Y97_09880	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_09885	PF02540	NAD synthase
C3Y97_09890	PF02687	FtsX-like permease family
C3Y97_09895	PF18277	AbrB C-terminal domain
C3Y97_09895	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
C3Y97_09900	PF00082	Subtilase family
C3Y97_09905	PF01022	Bacterial regulatory protein, arsR family
C3Y97_09910	PF00248	Aldo/keto reductase family
C3Y97_09915	PF07690	Major Facilitator Superfamily
C3Y97_09925	PF05656	Protein of unknown function (DUF805)
C3Y97_09945	PF03193	RsgA GTPase
C3Y97_09950	PF02743	Cache domain
C3Y97_09950	PF00672	HAMP domain
C3Y97_09950	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_09975	PF00210	Ferritin-like domain
C3Y97_09990	PF00296	Luciferase-like monooxygenase
C3Y97_10000	PF01593	Flavin containing amine oxidoreductase
C3Y97_10005	PF13302	Acetyltransferase (GNAT) domain
C3Y97_10010	PF00248	Aldo/keto reductase family
C3Y97_10015	PF02492	CobW/HypB/UreG, nucleotide-binding domain
C3Y97_10015	PF07683	Cobalamin synthesis protein cobW C-terminal domain
C3Y97_10020	PF00583	Acetyltransferase (GNAT) family
C3Y97_10025	PF01297	Zinc-uptake complex component A periplasmic
C3Y97_10030	PF13460	NAD(P)H-binding 
C3Y97_10035	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
C3Y97_10040	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
C3Y97_10040	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
C3Y97_10050	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_10055	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_10065	PF00300	Histidine phosphatase superfamily (branch 1)
C3Y97_10075	PF08757	CotH kinase protein
C3Y97_10080	PF00293	NUDIX domain
C3Y97_10085	PF09335	SNARE associated Golgi protein
C3Y97_10100	PF01943	Polysaccharide biosynthesis protein
C3Y97_10100	PF14667	Polysaccharide biosynthesis C-terminal domain
C3Y97_10110	PF03773	Predicted permease
C3Y97_10115	PF09323	Domain of unknown function (DUF1980)
C3Y97_10120	PF03061	Thioesterase superfamily
C3Y97_10130	PF13091	PLD-like domain
C3Y97_10130	PF13396	Phospholipase_D-nuclease N-terminal
C3Y97_10145	PF13460	NAD(P)H-binding 
C3Y97_10150	PF04306	Protein of unknown function (DUF456)
C3Y97_10155	PF01595	Cyclin M transmembrane N-terminal domain
C3Y97_10155	PF00571	CBS domain
C3Y97_10155	PF03471	Transporter associated domain
C3Y97_10170	PF05525	Branched-chain amino acid transport protein
C3Y97_10175	PF01588	Putative tRNA binding domain
C3Y97_10195	PF07454	Stage II sporulation protein P (SpoIIP)
C3Y97_10205	PF02557	D-alanyl-D-alanine carboxypeptidase
C3Y97_10215	PF01425	Amidase
C3Y97_10220	PF07690	Major Facilitator Superfamily
C3Y97_10230	PF01145	SPFH domain / Band 7 family
C3Y97_10235	PF07454	Stage II sporulation protein P (SpoIIP)
C3Y97_10260	PF00842	Alanine racemase, C-terminal domain
C3Y97_10260	PF01168	Alanine racemase, N-terminal domain
C3Y97_10280	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
C3Y97_10285	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_10285	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_10290	PF00155	Aminotransferase class I and II
C3Y97_10290	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_10335	PF06013	Proteins of 100 residues with WXG
C3Y97_10350	PF08817	WXG100 protein secretion system (Wss), protein YukD
C3Y97_10355	PF10140	WXG100 protein secretion system (Wss), protein YukC
C3Y97_10360	PF01580	FtsK/SpoIIIE family
C3Y97_10360	PF12538	DNA transporter 
C3Y97_10415	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
C3Y97_10440	PF01209	ubiE/COQ5 methyltransferase family
C3Y97_10445	PF01268	Formate--tetrahydrofolate ligase
C3Y97_10455	PF00271	Helicase conserved C-terminal domain
C3Y97_10455	PF00270	DEAD/DEAH box helicase
C3Y97_10460	PF01261	Xylose isomerase-like TIM barrel
C3Y97_10465	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_10475	PF00107	Zinc-binding dehydrogenase
C3Y97_10475	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_10480	PF08281	Sigma-70, region 4
C3Y97_10480	PF04542	Sigma-70 region 2 
C3Y97_10490	PF03109	ABC1 family
C3Y97_10500	PF00258	Flavodoxin
C3Y97_10500	PF01613	Flavin reductase like domain
C3Y97_10510	PF00255	Glutathione peroxidase
C3Y97_10515	PF01841	Transglutaminase-like superfamily
C3Y97_10515	PF13559	Domain of unknown function (DUF4129)
C3Y97_10515	PF11992	Domain of unknown function (DUF3488)
C3Y97_10520	PF01882	Protein of unknown function DUF58
C3Y97_10525	PF07726	ATPase family associated with various cellular activities (AAA)
C3Y97_10525	PF17863	AAA lid domain
C3Y97_10530	PF01568	Molydopterin dinucleotide binding domain
C3Y97_10530	PF14710	Respiratory nitrate reductase alpha N-terminal
C3Y97_10530	PF00384	Molybdopterin oxidoreductase
C3Y97_10535	PF13247	4Fe-4S dicluster domain
C3Y97_10535	PF14711	Respiratory nitrate reductase beta C-terminal
C3Y97_10540	PF02613	Nitrate reductase delta subunit
C3Y97_10545	PF02665	Nitrate reductase gamma subunit
C3Y97_10550	PF00325	Bacterial regulatory proteins, crp family
C3Y97_10550	PF00027	Cyclic nucleotide-binding domain
C3Y97_10555	PF06463	Molybdenum Cofactor Synthesis C
C3Y97_10555	PF04055	Radical SAM superfamily
C3Y97_10560	PF00899	ThiF family
C3Y97_10565	PF03454	MoeA C-terminal region (domain IV)
C3Y97_10565	PF00994	Probable molybdopterin binding domain
C3Y97_10565	PF03453	MoeA N-terminal region (domain I and II)
C3Y97_10570	PF02391	MoaE protein
C3Y97_10580	PF07690	Major Facilitator Superfamily
C3Y97_10610	PF01903	CbiX
C3Y97_10615	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
C3Y97_10620	PF00355	Rieske [2Fe-2S] domain
C3Y97_10625	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_10625	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
C3Y97_10625	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
C3Y97_10625	PF04324	BFD-like [2Fe-2S] binding domain
C3Y97_10625	PF18267	Rubredoxin NAD+ reductase C-terminal domain
C3Y97_10630	PF04405	Domain of Unknown function (DUF542)  
C3Y97_10630	PF01814	Hemerythrin HHE cation binding domain
C3Y97_10665	PF04232	Stage V sporulation protein S (SpoVS)
C3Y97_10690	PF18801	response regulator aspartate phosphatase H, N terminal
C3Y97_10690	PF17874	MalT-like TPR region
C3Y97_10705	PF01966	HD domain
C3Y97_10710	PF12848	ABC transporter
C3Y97_10710	PF00005	ABC transporter
C3Y97_10710	PF16326	ABC transporter C-terminal domain
C3Y97_10770	PF13769	Virulence factor
C3Y97_10770	PF08712	Scaffold protein Nfu/NifU N terminal
C3Y97_10780	PF06491	Disulphide isomerase
C3Y97_10785	PF04445	Putative SAM-dependent methyltransferase
C3Y97_10790	PF00750	tRNA synthetases class I (R)
C3Y97_10790	PF05746	DALR anticodon binding domain
C3Y97_10790	PF03485	Arginyl tRNA synthetase N terminal domain
C3Y97_10815	PF08264	Anticodon-binding domain of tRNA
C3Y97_10815	PF00133	tRNA synthetases class I (I, L, M and V)
C3Y97_10845	PF01336	OB-fold nucleic acid binding domain
C3Y97_10845	PF00152	tRNA synthetases class II (D, K and N) 
C3Y97_10850	PF00209	Sodium:neurotransmitter symporter family
C3Y97_10865	PF10997	Alternate to MurJ
C3Y97_10870	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_10880	PF00465	Iron-containing alcohol dehydrogenase 
C3Y97_10885	PF01177	Asp/Glu/Hydantoin racemase
C3Y97_10890	PF01980	tRNA-methyltransferase O
C3Y97_10895	PF00583	Acetyltransferase (GNAT) family
C3Y97_10900	PF11188	Protein of unknown function (DUF2975)
C3Y97_10905	PF13443	Cro/C1-type HTH DNA-binding domain
C3Y97_10910	PF08645	Polynucleotide kinase 3 phosphatase
C3Y97_10920	PF00005	ABC transporter
C3Y97_10930	PF14005	YpjP-like protein
C3Y97_10935	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_10950	PF07930	D-aminopeptidase, domain B
C3Y97_10950	PF00144	Beta-lactamase
C3Y97_10955	PF00303	Thymidylate synthase
C3Y97_10960	PF00186	Dihydrofolate reductase
C3Y97_10965	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_10965	PF03717	Penicillin-binding Protein dimerisation domain
C3Y97_10965	PF05223	NTF2-like N-terminal transpeptidase domain
C3Y97_10970	PF02525	Flavodoxin-like fold
C3Y97_10975	PF01553	Acyltransferase
C3Y97_10980	PF03006	Haemolysin-III related
C3Y97_10985	PF02416	mttA/Hcf106 family
C3Y97_10990	PF00902	Sec-independent protein translocase protein (TatC)
C3Y97_11000	PF02645	Uncharacterised protein, DegV family COG1307
C3Y97_11010	PF02630	SCO1/SenC
C3Y97_11015	PF00011	Hsp20/alpha crystallin family
C3Y97_11020	PF13537	Glutamine amidotransferase domain
C3Y97_11020	PF00733	Asparagine synthase
C3Y97_11035	PF05036	Sporulation related domain
C3Y97_11035	PF01520	N-acetylmuramoyl-L-alanine amidase
C3Y97_11040	PF01497	Periplasmic binding protein
C3Y97_11045	PF01063	Amino-transferase class IV
C3Y97_11050	PF00881	Nitroreductase family
C3Y97_11065	PF00857	Isochorismatase family
C3Y97_11075	PF00011	Hsp20/alpha crystallin family
C3Y97_11080	PF00924	Mechanosensitive ion channel
C3Y97_11085	PF13185	GAF domain
C3Y97_11085	PF07730	Histidine kinase
C3Y97_11090	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_11090	PF00072	Response regulator receiver domain
C3Y97_11095	PF01418	Helix-turn-helix domain, rpiR family
C3Y97_11095	PF01380	SIS domain
C3Y97_11100	PF02567	Phenazine biosynthesis-like protein
C3Y97_11105	PF00107	Zinc-binding dehydrogenase
C3Y97_11105	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_11120	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3Y97_11120	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3Y97_11125	PF02447	GntP family permease
C3Y97_11130	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
C3Y97_11130	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3Y97_11135	PF10924	Protein of unknown function (DUF2711)
C3Y97_11150	PF03358	NADPH-dependent FMN reductase
C3Y97_11165	PF00571	CBS domain
C3Y97_11165	PF00005	ABC transporter
C3Y97_11170	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_11175	PF13520	Amino acid permease
C3Y97_11205	PF00571	CBS domain
C3Y97_11205	PF03471	Transporter associated domain
C3Y97_11205	PF01595	Cyclin M transmembrane N-terminal domain
C3Y97_11210	PF00171	Aldehyde dehydrogenase family
C3Y97_11215	PF07997	Protein of unknown function (DUF1694)
C3Y97_11220	PF09385	Histidine kinase N terminal
C3Y97_11230	PF00202	Aminotransferase class-III
C3Y97_11235	PF01144	Coenzyme A transferase
C3Y97_11240	PF01144	Coenzyme A transferase
C3Y97_11245	PF07687	Peptidase dimerisation domain
C3Y97_11245	PF01546	Peptidase family M20/M25/M40
C3Y97_11250	PF00583	Acetyltransferase (GNAT) family
C3Y97_11255	PF02954	Bacterial regulatory protein, Fis family
C3Y97_11255	PF13426	PAS domain
C3Y97_11255	PF00158	Sigma-54 interaction domain
C3Y97_11260	PF12544	Lysine-2,3-aminomutase 
C3Y97_11265	PF14122	YokU-like protein, putative antitoxin
C3Y97_11270	PF06855	YozE SAM-like fold
C3Y97_11285	PF14162	YozD-like protein
C3Y97_11295	PF08239	Bacterial SH3 domain
C3Y97_11295	PF00069	Protein kinase domain
C3Y97_11305	PF01569	PAP2 superfamily
C3Y97_11310	PF16916	Dimerisation domain of Zinc Transporter
C3Y97_11310	PF01545	Cation efflux family
C3Y97_11315	PF00085	Thioredoxin
C3Y97_11320	PF13302	Acetyltransferase (GNAT) domain
C3Y97_11395	PF10676	Spore germination protein gerPA/gerPF
C3Y97_11410	PF00106	short chain dehydrogenase
C3Y97_11430	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_11430	PF00912	Transglycosylase
C3Y97_11440	PF07690	Major Facilitator Superfamily
C3Y97_11445	PF01521	Iron-sulphur cluster biosynthesis
C3Y97_11450	PF00285	Citrate synthase, C-terminal domain
C3Y97_11455	PF03972	MmgE/PrpD family
C3Y97_11465	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3Y97_11465	PF02770	Acyl-CoA dehydrogenase, middle domain
C3Y97_11465	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3Y97_11470	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
C3Y97_11470	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3Y97_11475	PF00171	Aldehyde dehydrogenase family
C3Y97_11480	PF01810	LysE type translocator
C3Y97_11485	PF00378	Enoyl-CoA hydratase/isomerase
C3Y97_11500	PF12320	Type 5 capsule protein repressor C-terminal domain
C3Y97_11500	PF00149	Calcineurin-like phosphoesterase
C3Y97_11505	PF13476	AAA domain
C3Y97_11515	PF01022	Bacterial regulatory protein, arsR family
C3Y97_11535	PF07690	Major Facilitator Superfamily
C3Y97_11545	PF00106	short chain dehydrogenase
C3Y97_11550	PF00425	chorismate binding enzyme
C3Y97_11555	PF00501	AMP-binding enzyme
C3Y97_11555	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_11560	PF00550	Phosphopantetheine attachment site
C3Y97_11560	PF00857	Isochorismatase family
C3Y97_11565	PF00550	Phosphopantetheine attachment site
C3Y97_11565	PF00668	Condensation domain
C3Y97_11565	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_11565	PF00501	AMP-binding enzyme
C3Y97_11565	PF00975	Thioesterase domain
C3Y97_11570	PF03621	MbtH-like protein
C3Y97_11575	PF07690	Major Facilitator Superfamily
C3Y97_11590	PF00216	Bacterial DNA-binding protein
C3Y97_11600	PF05163	DinB family
C3Y97_11605	PF00082	Subtilase family
C3Y97_11610	PF01235	Sodium:alanine symporter family
C3Y97_11630	PF00849	RNA pseudouridylate synthase
C3Y97_11630	PF01479	S4 domain
C3Y97_11635	PF02824	TGS domain
C3Y97_11635	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3Y97_11635	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3Y97_11635	PF03129	Anticodon binding domain
C3Y97_11640	PF00005	ABC transporter
C3Y97_11655	PF00205	Thiamine pyrophosphate enzyme, central domain
C3Y97_11655	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3Y97_11655	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3Y97_11695	PF00027	Cyclic nucleotide-binding domain
C3Y97_11705	PF00561	alpha/beta hydrolase fold
C3Y97_11710	PF00293	NUDIX domain
C3Y97_11720	PF16123	Hydroxyacylglutathione hydrolase C-terminus
C3Y97_11720	PF00753	Metallo-beta-lactamase superfamily
C3Y97_11730	PF03176	MMPL family
C3Y97_11755	PF00302	Chloramphenicol acetyltransferase
C3Y97_11770	PF00583	Acetyltransferase (GNAT) family
C3Y97_11805	PF13302	Acetyltransferase (GNAT) domain
C3Y97_11815	PF00313	'Cold-shock' DNA-binding domain
C3Y97_11835	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_11835	PF03466	LysR substrate binding domain
C3Y97_11840	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3Y97_11840	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3Y97_11860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_11860	PF03466	LysR substrate binding domain
C3Y97_11865	PF03473	MOSC domain
C3Y97_11865	PF03475	3-alpha domain
C3Y97_11880	PF00005	ABC transporter
C3Y97_11880	PF00664	ABC transporter transmembrane region
C3Y97_11885	PF00005	ABC transporter
C3Y97_11885	PF00664	ABC transporter transmembrane region
C3Y97_11915	PF01810	LysE type translocator
C3Y97_11920	PF07883	Cupin domain
C3Y97_11920	PF01381	Helix-turn-helix
C3Y97_11950	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3Y97_11950	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_11955	PF08281	Sigma-70, region 4
C3Y97_11955	PF12680	SnoaL-like domain
C3Y97_11955	PF04542	Sigma-70 region 2 
C3Y97_11985	PF02638	Glycosyl hydrolase-like 10
C3Y97_11995	PF02378	Phosphotransferase system, EIIC 
C3Y97_12005	PF03702	Anhydro-N-acetylmuramic acid kinase
C3Y97_12010	PF01869	BadF/BadG/BcrA/BcrD ATPase family
C3Y97_12015	PF02660	Glycerol-3-phosphate acyltransferase
C3Y97_12020	PF00266	Aminotransferase class-V
C3Y97_12025	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_12030	PF01047	MarR family
C3Y97_12035	PF07690	Major Facilitator Superfamily
C3Y97_12055	PF00753	Metallo-beta-lactamase superfamily
C3Y97_12055	PF16123	Hydroxyacylglutathione hydrolase C-terminus
C3Y97_12065	PF00270	DEAD/DEAH box helicase
C3Y97_12065	PF00271	Helicase conserved C-terminal domain
C3Y97_12075	PF17932	Tetracyclin repressor-like, C-terminal domain
C3Y97_12075	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_12160	PF09680	Family of unknown function
C3Y97_12165	PF09680	Family of unknown function
C3Y97_12210	PF09313	Domain of unknown function (DUF1971)
C3Y97_12210	PF03848	Tellurite resistance protein TehB
C3Y97_12220	PF08241	Methyltransferase domain
C3Y97_12225	PF00205	Thiamine pyrophosphate enzyme, central domain
C3Y97_12225	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3Y97_12225	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3Y97_12230	PF01047	MarR family
C3Y97_12235	PF00300	Histidine phosphatase superfamily (branch 1)
C3Y97_12245	PF14171	Toxin SpoIISA, type II toxin-antitoxin system
C3Y97_12265	PF01546	Peptidase family M20/M25/M40
C3Y97_12265	PF07687	Peptidase dimerisation domain
C3Y97_12280	PF00072	Response regulator receiver domain
C3Y97_12280	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_12290	PF18277	AbrB C-terminal domain
C3Y97_12290	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
C3Y97_12305	PF01925	Sulfite exporter TauE/SafE
C3Y97_12310	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_12315	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_12315	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_12330	PF07690	Major Facilitator Superfamily
C3Y97_12335	PF00550	Phosphopantetheine attachment site
C3Y97_12335	PF00501	AMP-binding enzyme
C3Y97_12335	PF00668	Condensation domain
C3Y97_12335	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_12340	PF00501	AMP-binding enzyme
C3Y97_12340	PF00550	Phosphopantetheine attachment site
C3Y97_12340	PF07993	Male sterility protein
C3Y97_12340	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_12340	PF00668	Condensation domain
C3Y97_12345	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_12345	PF00501	AMP-binding enzyme
C3Y97_12345	PF00668	Condensation domain
C3Y97_12345	PF00550	Phosphopantetheine attachment site
C3Y97_12350	PF01648	4'-phosphopantetheinyl transferase superfamily
C3Y97_12355	PF00975	Thioesterase domain
C3Y97_12365	PF05139	Erythromycin esterase
C3Y97_12375	PF13302	Acetyltransferase (GNAT) domain
C3Y97_12385	PF01520	N-acetylmuramoyl-L-alanine amidase
C3Y97_12385	PF00395	S-layer homology domain
C3Y97_12435	PF02687	FtsX-like permease family
C3Y97_12440	PF00005	ABC transporter
C3Y97_12445	PF00144	Beta-lactamase
C3Y97_12450	PF00144	Beta-lactamase
C3Y97_12460	PF00144	Beta-lactamase
C3Y97_12475	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_12475	PF00072	Response regulator receiver domain
C3Y97_12480	PF00144	Beta-lactamase
C3Y97_12480	PF11954	Domain of unknown function (DUF3471)
C3Y97_12485	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_12485	PF03717	Penicillin-binding Protein dimerisation domain
C3Y97_12485	PF05223	NTF2-like N-terminal transpeptidase domain
C3Y97_12490	PF08281	Sigma-70, region 4
C3Y97_12490	PF04542	Sigma-70 region 2 
C3Y97_12500	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_12500	PF03717	Penicillin-binding Protein dimerisation domain
C3Y97_12515	PF00149	Calcineurin-like phosphoesterase
C3Y97_12525	PF00005	ABC transporter
C3Y97_12535	PF08359	YsiA-like protein, C-terminal region
C3Y97_12535	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_12550	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3Y97_12550	PF02770	Acyl-CoA dehydrogenase, middle domain
C3Y97_12550	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3Y97_12555	PF02785	Biotin carboxylase C-terminal domain
C3Y97_12555	PF00289	Biotin carboxylase, N-terminal domain
C3Y97_12555	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3Y97_12560	PF00364	Biotin-requiring enzyme
C3Y97_12565	PF00682	HMGL-like
C3Y97_12570	PF00378	Enoyl-CoA hydratase/isomerase
C3Y97_12575	PF01039	Carboxyl transferase domain
C3Y97_12580	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_12580	PF00501	AMP-binding enzyme
C3Y97_12580	PF16177	Acetyl-coenzyme A synthetase N-terminus
C3Y97_12605	PF00485	Phosphoribulokinase / Uridine kinase family
C3Y97_12630	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_12630	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_12635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_12635	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_12640	PF00072	Response regulator receiver domain
C3Y97_12640	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_12645	PF01966	HD domain
C3Y97_12660	PF13021	Domain of unknown function (DUF3885)
C3Y97_12665	PF01048	Phosphorylase superfamily
C3Y97_12680	PF01447	Thermolysin metallopeptidase, catalytic domain
C3Y97_12680	PF03413	Peptidase propeptide and YPEB domain
C3Y97_12680	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3Y97_12680	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3Y97_12685	PF12833	Helix-turn-helix domain
C3Y97_12685	PF17853	GGDEF-like domain
C3Y97_12710	PF17760	UvrA interaction domain
C3Y97_12710	PF00005	ABC transporter
C3Y97_12710	PF17755	UvrA DNA-binding domain
C3Y97_12715	PF00376	MerR family regulatory protein
C3Y97_12715	PF09278	MerR, DNA binding
C3Y97_12720	PF07690	Major Facilitator Superfamily
C3Y97_12730	PF01638	HxlR-like helix-turn-helix
C3Y97_12735	PF13847	Methyltransferase domain
C3Y97_12775	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_12775	PF00155	Aminotransferase class I and II
C3Y97_12785	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
C3Y97_12785	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
C3Y97_12800	PF00107	Zinc-binding dehydrogenase
C3Y97_12800	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_12810	PF04239	Protein of unknown function (DUF421)
C3Y97_12825	PF08450	SMP-30/Gluconolactonase/LRE-like region
C3Y97_12835	PF01921	tRNA synthetases class I (K)
C3Y97_12840	PF07486	Cell Wall Hydrolase
C3Y97_12845	PF00561	alpha/beta hydrolase fold
C3Y97_12855	PF00072	Response regulator receiver domain
C3Y97_12855	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_12860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_12885	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
C3Y97_12895	PF00005	ABC transporter
C3Y97_12900	PF02687	FtsX-like permease family
C3Y97_12920	PF03447	Homoserine dehydrogenase, NAD binding domain
C3Y97_12920	PF00742	Homoserine dehydrogenase
C3Y97_12920	PF01842	ACT domain
C3Y97_12925	PF00155	Aminotransferase class I and II
C3Y97_12925	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_12930	PF01820	D-ala D-ala ligase N-terminus
C3Y97_12930	PF07478	D-ala D-ala ligase C-terminus
C3Y97_12935	PF03070	TENA/THI-4/PQQC family
C3Y97_12995	PF00067	Cytochrome P450
C3Y97_13010	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_13015	PF07561	Domain of Unknown Function (DUF1540)
C3Y97_13025	PF00067	Cytochrome P450
C3Y97_13040	PF13426	PAS domain
C3Y97_13040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_13040	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_13040	PF13188	PAS domain
C3Y97_13040	PF00989	PAS fold
C3Y97_13050	PF10502	Signal peptidase, peptidase S26 
C3Y97_13055	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
C3Y97_13060	PF01177	Asp/Glu/Hydantoin racemase
C3Y97_13065	PF07155	ECF-type riboflavin transporter, S component
C3Y97_13070	PF12558	ATP-binding cassette cobalt transporter
C3Y97_13070	PF00005	ABC transporter
C3Y97_13085	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_13085	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_13175	PF00107	Zinc-binding dehydrogenase
C3Y97_13175	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_13180	PF01569	PAP2 superfamily
C3Y97_13235	PF05977	Transmembrane secretion effector
C3Y97_13240	PF13411	MerR HTH family regulatory protein
C3Y97_13240	PF06445	GyrI-like small molecule binding domain
C3Y97_13265	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3Y97_13285	PF00155	Aminotransferase class I and II
C3Y97_13285	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_13290	PF00892	EamA-like transporter family
C3Y97_13295	PF01270	Glycosyl hydrolases family 8
C3Y97_13300	PF01156	Inosine-uridine preferring nucleoside hydrolase
C3Y97_13315	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_13315	PF00293	NUDIX domain
C3Y97_13335	PF07690	Major Facilitator Superfamily
C3Y97_13350	PF09297	NADH pyrophosphatase zinc ribbon domain
C3Y97_13350	PF00293	NUDIX domain
C3Y97_13355	PF02768	DNA polymerase III beta subunit, C-terminal domain
C3Y97_13355	PF00712	DNA polymerase III beta subunit, N-terminal domain
C3Y97_13355	PF02767	DNA polymerase III beta subunit, central domain
C3Y97_13365	PF12706	Beta-lactamase superfamily domain
C3Y97_13375	PF01042	Endoribonuclease L-PSP
C3Y97_13380	PF09234	Domain of unknown function (DUF1963)
C3Y97_13405	PF01734	Patatin-like phospholipase
C3Y97_13410	PF08000	Bacterial PH domain
C3Y97_13420	PF12867	DinB superfamily
C3Y97_13435	PF02673	Bacitracin resistance protein BacA
C3Y97_13445	PF01541	GIY-YIG catalytic domain
C3Y97_13475	PF00005	ABC transporter
C3Y97_13495	PF01266	FAD dependent oxidoreductase
C3Y97_13525	PF00144	Beta-lactamase
C3Y97_13535	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_13535	PF00072	Response regulator receiver domain
C3Y97_13540	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_13540	PF16736	Single Cache-like 
C3Y97_13540	PF00989	PAS fold
C3Y97_13540	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_13555	PF00005	ABC transporter
C3Y97_13560	PF02687	FtsX-like permease family
C3Y97_13560	PF12704	MacB-like periplasmic core domain
C3Y97_13570	PF07859	alpha/beta hydrolase fold
C3Y97_13575	PF00282	Pyridoxal-dependent decarboxylase conserved domain
C3Y97_13580	PF00501	AMP-binding enzyme
C3Y97_13580	PF00550	Phosphopantetheine attachment site
C3Y97_13580	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_13580	PF00668	Condensation domain
C3Y97_13590	PF03714	Bacterial pullanase-associated domain
C3Y97_13590	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3Y97_13590	PF00128	Alpha amylase, catalytic domain
C3Y97_13595	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3Y97_13595	PF03413	Peptidase propeptide and YPEB domain
C3Y97_13595	PF01447	Thermolysin metallopeptidase, catalytic domain
C3Y97_13595	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3Y97_13600	PF02872	5'-nucleotidase, C-terminal domain
C3Y97_13600	PF00149	Calcineurin-like phosphoesterase
C3Y97_13620	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_13625	PF00344	SecY translocase
C3Y97_13630	PF00892	EamA-like transporter family
C3Y97_13635	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_13635	PF00155	Aminotransferase class I and II
C3Y97_13640	PF00107	Zinc-binding dehydrogenase
C3Y97_13640	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_13645	PF00561	alpha/beta hydrolase fold
C3Y97_13670	PF06081	Aromatic acid exporter family member 1
C3Y97_13685	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
C3Y97_13690	PF03413	Peptidase propeptide and YPEB domain
C3Y97_13690	PF14620	YpeB sporulation
C3Y97_13695	PF01471	Putative peptidoglycan binding domain
C3Y97_13695	PF07486	Cell Wall Hydrolase
C3Y97_13715	PF03301	Tryptophan 2,3-dioxygenase
C3Y97_13720	PF04199	Putative cyclase
C3Y97_13725	PF00266	Aminotransferase class-V
C3Y97_13730	PF08359	YsiA-like protein, C-terminal region
C3Y97_13730	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_13735	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_13735	PF00293	NUDIX domain
C3Y97_13755	PF00158	Sigma-54 interaction domain
C3Y97_13755	PF01590	GAF domain
C3Y97_13755	PF02954	Bacterial regulatory protein, Fis family
C3Y97_13770	PF13302	Acetyltransferase (GNAT) domain
C3Y97_13775	PF00455	DeoR C terminal sensor domain
C3Y97_13775	PF08220	DeoR-like helix-turn-helix domain
C3Y97_13790	PF02082	Transcriptional regulator
C3Y97_13805	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3Y97_13805	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_13810	PF00364	Biotin-requiring enzyme
C3Y97_13810	PF02817	e3 binding domain
C3Y97_13810	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3Y97_13815	PF02780	Transketolase, C-terminal domain
C3Y97_13815	PF02779	Transketolase, pyrimidine binding domain
C3Y97_13820	PF00676	Dehydrogenase E1 component
C3Y97_13830	PF00106	short chain dehydrogenase
C3Y97_13835	PF13789	Domain of unknown function (DUF4181)
C3Y97_13860	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_13865	PF00005	ABC transporter
C3Y97_13865	PF00571	CBS domain
C3Y97_13870	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
C3Y97_13875	PF00574	Clp protease
C3Y97_13890	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
C3Y97_13895	PF13673	Acetyltransferase (GNAT) domain
C3Y97_13900	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
C3Y97_13900	PF18416	N-acetylglucosamine binding protein domain 2
C3Y97_13905	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
C3Y97_13910	PF03781	Sulfatase-modifying factor enzyme 1
C3Y97_13925	PF10990	Protein of unknown function (DUF2809)
C3Y97_13930	PF08241	Methyltransferase domain
C3Y97_13935	PF04237	YjbR
C3Y97_13980	PF00583	Acetyltransferase (GNAT) family
C3Y97_13985	PF13538	UvrD-like helicase C-terminal domain
C3Y97_14000	PF00270	DEAD/DEAH box helicase
C3Y97_14000	PF00271	Helicase conserved C-terminal domain
C3Y97_14000	PF00570	HRDC domain
C3Y97_14000	PF16124	RecQ zinc-binding
C3Y97_14000	PF09382	RQC domain
C3Y97_14025	PF01510	N-acetylmuramoyl-L-alanine amidase
C3Y97_14025	PF12123	N-acetylmuramoyl-l-alanine amidase
C3Y97_14050	PF01368	DHH family
C3Y97_14050	PF02833	DHHA2 domain
C3Y97_14055	PF03067	Lytic polysaccharide mono-oxygenase, cellulose-degrading
C3Y97_14055	PF18416	N-acetylglucosamine binding protein domain 2
C3Y97_14070	PF02627	Carboxymuconolactone decarboxylase family
C3Y97_14075	PF01235	Sodium:alanine symporter family
C3Y97_14080	PF00171	Aldehyde dehydrogenase family
C3Y97_14085	PF00701	Dihydrodipicolinate synthetase family
C3Y97_14090	PF05544	Proline racemase
C3Y97_14095	PF05544	Proline racemase
C3Y97_14100	PF01266	FAD dependent oxidoreductase
C3Y97_14105	PF02954	Bacterial regulatory protein, Fis family
C3Y97_14105	PF13188	PAS domain
C3Y97_14105	PF00158	Sigma-54 interaction domain
C3Y97_14110	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_14110	PF04324	BFD-like [2Fe-2S] binding domain
C3Y97_14120	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_14120	PF04324	BFD-like [2Fe-2S] binding domain
C3Y97_14135	PF08876	Domain of unknown function (DUF1836)
C3Y97_14145	PF01966	HD domain
C3Y97_14150	PF09335	SNARE associated Golgi protein
C3Y97_14160	PF04914	DltD protein
C3Y97_14170	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_14175	PF18348	Bacterial dipeptidyl-peptidase Sh3 domain
C3Y97_14175	PF00877	NlpC/P60 family
C3Y97_14180	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
C3Y97_14180	PF13378	Enolase C-terminal domain-like
C3Y97_14195	PF00248	Aldo/keto reductase family
C3Y97_14200	PF01965	DJ-1/PfpI family
C3Y97_14230	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
C3Y97_14230	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
C3Y97_14240	PF00672	HAMP domain
C3Y97_14240	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_14240	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_14245	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_14245	PF00072	Response regulator receiver domain
C3Y97_14265	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_14270	PF01048	Phosphorylase superfamily
C3Y97_14275	PF03808	Glycosyl transferase WecB/TagA/CpsF family
C3Y97_14280	PF01432	Peptidase family M3
C3Y97_14280	PF08439	Oligopeptidase F
C3Y97_14285	PF02645	Uncharacterised protein, DegV family COG1307
C3Y97_14290	PF07552	Spore Coat Protein X and V domain
C3Y97_14330	PF07690	Major Facilitator Superfamily
C3Y97_14340	PF04519	Polymer-forming cytoskeletal
C3Y97_14345	PF13171	Protein of unknown function (DUF4004)
C3Y97_14350	PF12793	Sugar transport-related sRNA regulator N-term
C3Y97_14350	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_14355	PF07690	Major Facilitator Superfamily
C3Y97_14375	PF04226	Transglycosylase associated protein
C3Y97_14390	PF08241	Methyltransferase domain
C3Y97_14430	PF00155	Aminotransferase class I and II
C3Y97_14435	PF07977	FabA-like domain
C3Y97_14460	PF00005	ABC transporter
C3Y97_14515	PF01594	AI-2E family transporter
C3Y97_14530	PF00296	Luciferase-like monooxygenase
C3Y97_14535	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_14540	PF09084	NMT1/THI5 like
C3Y97_14545	PF00005	ABC transporter
C3Y97_14580	PF02522	Aminoglycoside 3-N-acetyltransferase
C3Y97_14590	PF13536	Putative multidrug resistance efflux transporter
C3Y97_14600	PF12867	DinB superfamily
C3Y97_14620	PF08713	DNA alkylation repair enzyme
C3Y97_14625	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_14630	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_14640	PF01522	Polysaccharide deacetylase
C3Y97_14650	PF03741	Integral membrane protein TerC family
C3Y97_14655	PF00884	Sulfatase
C3Y97_14660	PF12848	ABC transporter
C3Y97_14660	PF00005	ABC transporter
C3Y97_14665	PF03176	MMPL family
C3Y97_14670	PF16295	Tetracyclin repressor-like, C-terminal domain
C3Y97_14670	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_14680	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3Y97_14685	PF02153	Prephenate dehydrogenase
C3Y97_14685	PF01842	ACT domain
C3Y97_14690	PF00155	Aminotransferase class I and II
C3Y97_14695	PF01264	Chorismate synthase
C3Y97_14705	PF00793	DAHP synthetase I family
C3Y97_14705	PF01817	Chorismate mutase type II
C3Y97_14730	PF01636	Phosphotransferase enzyme family
C3Y97_14755	PF06725	3D domain
C3Y97_14755	PF01476	LysM domain
C3Y97_14765	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_14790	PF06039	Malate:quinone oxidoreductase (Mqo)
C3Y97_14795	PF13407	Periplasmic binding protein domain
C3Y97_14800	PF02653	Branched-chain amino acid transport system / permease component
C3Y97_14805	PF02653	Branched-chain amino acid transport system / permease component
C3Y97_14810	PF00005	ABC transporter
C3Y97_14815	PF00325	Bacterial regulatory proteins, crp family
C3Y97_14815	PF04198	Putative sugar-binding domain
C3Y97_14820	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3Y97_14820	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3Y97_14830	PF01791	DeoC/LacD family aldolase
C3Y97_14840	PF03992	Antibiotic biosynthesis monooxygenase
C3Y97_14860	PF01773	Na+ dependent nucleoside transporter N-terminus
C3Y97_14860	PF07662	Na+ dependent nucleoside transporter C-terminus
C3Y97_14865	PF00171	Aldehyde dehydrogenase family
C3Y97_14870	PF00696	Amino acid kinase family
C3Y97_14870	PF01472	PUA domain
C3Y97_14880	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3Y97_14880	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3Y97_14885	PF01546	Peptidase family M20/M25/M40
C3Y97_14890	PF09339	IclR helix-turn-helix domain
C3Y97_14890	PF01614	Bacterial transcriptional regulator
C3Y97_14900	PF00324	Amino acid permease
C3Y97_14915	PF00487	Fatty acid desaturase
C3Y97_14920	PF05547	Immune inhibitor A peptidase M6
C3Y97_14925	PF04294	VanW like protein
C3Y97_14930	PF00245	Alkaline phosphatase
C3Y97_14935	PF11188	Protein of unknown function (DUF2975)
C3Y97_14940	PF13443	Cro/C1-type HTH DNA-binding domain
C3Y97_14960	PF13302	Acetyltransferase (GNAT) domain
C3Y97_14965	PF12681	Glyoxalase-like domain
C3Y97_14990	PF07726	ATPase family associated with various cellular activities (AAA)
C3Y97_14990	PF17863	AAA lid domain
C3Y97_15005	PF07690	Major Facilitator Superfamily
C3Y97_15015	PF00535	Glycosyl transferase family 2
C3Y97_15030	PF00535	Glycosyl transferase family 2
C3Y97_15035	PF00535	Glycosyl transferase family 2
C3Y97_15045	PF00202	Aminotransferase class-III
C3Y97_15050	PF00199	Catalase
C3Y97_15050	PF06628	Catalase-related immune-responsive
C3Y97_15055	PF18496	Collagenase G catalytic helper subdomain
C3Y97_15055	PF01752	Collagenase
C3Y97_15055	PF08453	Peptidase family M9 N-terminal
C3Y97_15055	PF04151	Bacterial pre-peptidase C-terminal domain
C3Y97_15065	PF01979	Amidohydrolase family
C3Y97_15065	PF13382	Adenine deaminase C-terminal domain
C3Y97_15070	PF00144	Beta-lactamase
C3Y97_15095	PF07726	ATPase family associated with various cellular activities (AAA)
C3Y97_15095	PF17863	AAA lid domain
C3Y97_15145	PF14436	Bacterial EndoU nuclease
C3Y97_15145	PF04740	LXG domain of WXG superfamily
C3Y97_15165	PF00881	Nitroreductase family
C3Y97_15170	PF01047	MarR family
C3Y97_15180	PF00679	Elongation factor G C-terminus
C3Y97_15180	PF14492	Elongation Factor G, domain II
C3Y97_15180	PF03764	Elongation factor G, domain IV
C3Y97_15180	PF00009	Elongation factor Tu GTP binding domain
C3Y97_15190	PF00293	NUDIX domain
C3Y97_15205	PF16363	GDP-mannose 4,6 dehydratase
C3Y97_15215	PF12833	Helix-turn-helix domain
C3Y97_15220	PF00583	Acetyltransferase (GNAT) family
C3Y97_15235	PF00892	EamA-like transporter family
C3Y97_15240	PF00155	Aminotransferase class I and II
C3Y97_15240	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_15255	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
C3Y97_15260	PF13031	Protein of unknown function (DUF3892)
C3Y97_15265	PF00672	HAMP domain
C3Y97_15265	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_15270	PF00072	Response regulator receiver domain
C3Y97_15270	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_15275	PF00561	alpha/beta hydrolase fold
C3Y97_15310	PF01925	Sulfite exporter TauE/SafE
C3Y97_15320	PF00324	Amino acid permease
C3Y97_15330	PF08713	DNA alkylation repair enzyme
C3Y97_15340	PF00672	HAMP domain
C3Y97_15340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_15340	PF18698	Histidine kinase sensor domain
C3Y97_15340	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_15340	PF00989	PAS fold
C3Y97_15345	PF00072	Response regulator receiver domain
C3Y97_15345	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_15355	PF12704	MacB-like periplasmic core domain
C3Y97_15355	PF00005	ABC transporter
C3Y97_15355	PF02687	FtsX-like permease family
C3Y97_15370	PF00293	NUDIX domain
C3Y97_15380	PF04989	Cephalosporin hydroxylase
C3Y97_15385	PF10502	Signal peptidase, peptidase S26 
C3Y97_15395	PF02146	Sir2 family
C3Y97_15400	PF01470	Pyroglutamyl peptidase
C3Y97_15415	PF03746	LamB/YcsF family
C3Y97_15420	PF02626	Carboxyltransferase domain, subdomain A and B 
C3Y97_15425	PF02682	Carboxyltransferase domain, subdomain C and D
C3Y97_15430	PF01614	Bacterial transcriptional regulator
C3Y97_15430	PF09339	IclR helix-turn-helix domain
C3Y97_15435	PF10502	Signal peptidase, peptidase S26 
C3Y97_15440	PF03932	CutC family
C3Y97_15455	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
C3Y97_15455	PF02770	Acyl-CoA dehydrogenase, middle domain
C3Y97_15455	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3Y97_15490	PF02915	Rubrerythrin
C3Y97_15505	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_15510	PF05547	Immune inhibitor A peptidase M6
C3Y97_15515	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
C3Y97_15515	PF00391	PEP-utilising enzyme, mobile domain
C3Y97_15520	PF00753	Metallo-beta-lactamase superfamily
C3Y97_15530	PF07875	Coat F domain
C3Y97_15540	PF08892	YqcI/YcgG family
C3Y97_15545	PF01810	LysE type translocator
C3Y97_15550	PF00324	Amino acid permease
C3Y97_15560	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_15565	PF10710	Protein of unknown function (DUF2512)
C3Y97_15570	PF11553	Protein of unknown function (DUF3231)
C3Y97_15575	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_15580	PF00107	Zinc-binding dehydrogenase
C3Y97_15580	PF13823	Alcohol dehydrogenase GroES-associated
C3Y97_15580	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_15590	PF10415	Fumarase C C-terminus
C3Y97_15590	PF00206	Lyase
C3Y97_15595	PF00710	Asparaginase, N-terminal
C3Y97_15595	PF17763	Glutaminase/Asparaginase C-terminal domain
C3Y97_15600	PF01381	Helix-turn-helix
C3Y97_15620	PF05504	Spore germination B3/ GerAC like, C-terminal 
C3Y97_15625	PF03845	Spore germination protein
C3Y97_15630	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_15635	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_15635	PF13426	PAS domain
C3Y97_15635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_15635	PF13188	PAS domain
C3Y97_15635	PF00989	PAS fold
C3Y97_15640	PF05791	Bacillus haemolytic enterotoxin (HBL)
C3Y97_15645	PF05791	Bacillus haemolytic enterotoxin (HBL)
C3Y97_15660	PF17853	GGDEF-like domain
C3Y97_15660	PF12833	Helix-turn-helix domain
C3Y97_15675	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_15680	PF02151	UvrB/uvrC motif
C3Y97_15680	PF12826	Helix-hairpin-helix motif
C3Y97_15680	PF01541	GIY-YIG catalytic domain
C3Y97_15680	PF08459	UvrC Helix-hairpin-helix N-terminal
C3Y97_15685	PF13520	Amino acid permease
C3Y97_15690	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3Y97_15690	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3Y97_15695	PF05504	Spore germination B3/ GerAC like, C-terminal 
C3Y97_15700	PF03845	Spore germination protein
C3Y97_15705	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_15715	PF08664	YcbB domain
C3Y97_15715	PF00072	Response regulator receiver domain
C3Y97_15720	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_15725	PF04960	Glutaminase
C3Y97_15730	PF01235	Sodium:alanine symporter family
C3Y97_15740	PF00067	Cytochrome P450
C3Y97_15745	PF00144	Beta-lactamase
C3Y97_15755	PF00149	Calcineurin-like phosphoesterase
C3Y97_15755	PF02872	5'-nucleotidase, C-terminal domain
C3Y97_15755	PF17936	Bacterial Ig domain
C3Y97_15760	PF00561	alpha/beta hydrolase fold
C3Y97_15765	PF00857	Isochorismatase family
C3Y97_15780	PF01979	Amidohydrolase family
C3Y97_15785	PF03466	LysR substrate binding domain
C3Y97_15785	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_15790	PF01047	MarR family
C3Y97_15795	PF01544	CorA-like Mg2+ transporter protein
C3Y97_15815	PF12146	Serine aminopeptidase, S33
C3Y97_15815	PF13026	Protein of unknown function (DUF3887)
C3Y97_15830	PF03073	TspO/MBR family
C3Y97_15835	PF03441	FAD binding domain of DNA photolyase
C3Y97_15835	PF00875	DNA photolyase
C3Y97_15855	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
C3Y97_15860	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
C3Y97_15860	PF00361	Proton-conducting membrane transporter
C3Y97_15865	PF10057	Uncharacterized conserved protein (DUF2294)
C3Y97_15875	PF05504	Spore germination B3/ GerAC like, C-terminal 
C3Y97_15880	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_15885	PF01522	Polysaccharide deacetylase
C3Y97_15895	PF01040	UbiA prenyltransferase family
C3Y97_15905	PF12746	GNAT acetyltransferase
C3Y97_15910	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3Y97_15915	PF01758	Sodium Bile acid symporter family
C3Y97_15920	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_15925	PF01022	Bacterial regulatory protein, arsR family
C3Y97_15940	PF01872	RibD C-terminal domain
C3Y97_15945	PF00550	Phosphopantetheine attachment site
C3Y97_15945	PF07993	Male sterility protein
C3Y97_15950	PF18665	Tetracyclin repressor-like, C-terminal domain
C3Y97_15950	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_15955	PF08453	Peptidase family M9 N-terminal
C3Y97_15955	PF18496	Collagenase G catalytic helper subdomain
C3Y97_15955	PF01752	Collagenase
C3Y97_15965	PF07690	Major Facilitator Superfamily
C3Y97_15970	PF16859	Tetracyclin repressor-like, C-terminal domain
C3Y97_15970	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_15975	PF12804	MobA-like NTP transferase domain
C3Y97_15980	PF02625	XdhC and CoxI family
C3Y97_15980	PF13478	XdhC Rossmann domain
C3Y97_15985	PF01799	[2Fe-2S] binding domain
C3Y97_15985	PF00111	2Fe-2S iron-sulfur cluster binding domain
C3Y97_15995	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
C3Y97_15995	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
C3Y97_16010	PF00069	Protein kinase domain
C3Y97_16010	PF13847	Methyltransferase domain
C3Y97_16030	PF01037	Lrp/AsnC ligand binding domain
C3Y97_16045	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_16095	PF00144	Beta-lactamase
C3Y97_16100	PF00144	Beta-lactamase
C3Y97_16110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_16110	PF03466	LysR substrate binding domain
C3Y97_16115	PF00892	EamA-like transporter family
C3Y97_16125	PF08803	Putative mono-oxygenase ydhR
C3Y97_16135	PF12802	MarR family
C3Y97_16170	PF00072	Response regulator receiver domain
C3Y97_16170	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_16175	PF00672	HAMP domain
C3Y97_16175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_16175	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_16205	PF00072	Response regulator receiver domain
C3Y97_16205	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_16225	PF00258	Flavodoxin
C3Y97_16225	PF00175	Oxidoreductase NAD-binding domain 
C3Y97_16225	PF00067	Cytochrome P450
C3Y97_16225	PF00667	FAD binding domain
C3Y97_16230	PF07690	Major Facilitator Superfamily
C3Y97_16255	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_16265	PF01139	tRNA-splicing ligase RtcB
C3Y97_16275	PF04072	Leucine carboxyl methyltransferase
C3Y97_16285	PF00005	ABC transporter
C3Y97_16290	PF02687	FtsX-like permease family
C3Y97_16310	PF00672	HAMP domain
C3Y97_16310	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_16310	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_16315	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_16315	PF00072	Response regulator receiver domain
C3Y97_16320	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_16320	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_16330	PF17676	LD-carboxypeptidase C-terminal domain
C3Y97_16330	PF02016	LD-carboxypeptidase N-terminal domain
C3Y97_16370	PF00082	Subtilase family
C3Y97_16385	PF03315	Serine dehydratase beta chain
C3Y97_16385	PF01842	ACT domain
C3Y97_16400	PF00202	Aminotransferase class-III
C3Y97_16405	PF07503	HypF finger
C3Y97_16405	PF01300	Telomere recombination
C3Y97_16405	PF17788	HypF Kae1-like domain
C3Y97_16405	PF00708	Acylphosphatase
C3Y97_16410	PF00586	AIR synthase related protein, N-terminal domain
C3Y97_16410	PF02769	AIR synthase related protein, C-terminal domain
C3Y97_16415	PF00857	Isochorismatase family
C3Y97_16420	PF01037	Lrp/AsnC ligand binding domain
C3Y97_16425	PF13520	Amino acid permease
C3Y97_16445	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3Y97_16445	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3Y97_16445	PF01842	ACT domain
C3Y97_16450	PF00266	Aminotransferase class-V
C3Y97_16465	PF07883	Cupin domain
C3Y97_16475	PF12833	Helix-turn-helix domain
C3Y97_16475	PF01497	Periplasmic binding protein
C3Y97_16485	PF01804	Penicillin amidase
C3Y97_16500	PF01510	N-acetylmuramoyl-L-alanine amidase
C3Y97_16500	PF01476	LysM domain
C3Y97_16500	PF01471	Putative peptidoglycan binding domain
C3Y97_16590	PF04634	Protein of unknown function, DUF600
C3Y97_16595	PF04740	LXG domain of WXG superfamily
C3Y97_16620	PF02557	D-alanyl-D-alanine carboxypeptidase
C3Y97_16625	PF09587	Bacterial capsule synthesis protein PGA_cap
C3Y97_16630	PF14044	NETI protein
C3Y97_16635	PF07690	Major Facilitator Superfamily
C3Y97_16645	PF12697	Alpha/beta hydrolase family
C3Y97_16650	PF01047	MarR family
C3Y97_16655	PF07690	Major Facilitator Superfamily
C3Y97_16660	PF00144	Beta-lactamase
C3Y97_16665	PF12679	ABC-2 family transporter protein
C3Y97_16670	PF00005	ABC transporter
C3Y97_16670	PF13732	Domain of unknown function (DUF4162)
C3Y97_16675	PF13396	Phospholipase_D-nuclease N-terminal
C3Y97_16690	PF02667	Short chain fatty acid transporter
C3Y97_16700	PF02525	Flavodoxin-like fold
C3Y97_16720	PF14256	YwiC-like protein
C3Y97_16730	PF00005	ABC transporter
C3Y97_16750	PF03737	Aldolase/RraA
C3Y97_16755	PF03606	C4-dicarboxylate anaerobic carrier
C3Y97_16760	PF04231	Endonuclease I
C3Y97_16785	PF04073	Aminoacyl-tRNA editing domain
C3Y97_16790	PF13393	Histidyl-tRNA synthetase
C3Y97_16790	PF03129	Anticodon binding domain
C3Y97_16805	PF01638	HxlR-like helix-turn-helix
C3Y97_16810	PF00881	Nitroreductase family
C3Y97_16820	PF02887	Pyruvate kinase, alpha/beta domain
C3Y97_16820	PF00224	Pyruvate kinase, barrel domain
C3Y97_16820	PF00391	PEP-utilising enzyme, mobile domain
C3Y97_16855	PF00005	ABC transporter
C3Y97_16885	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_16915	PF00293	NUDIX domain
C3Y97_16915	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_16920	PF00579	tRNA synthetases class I (W and Y)
C3Y97_16925	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
C3Y97_16925	PF13288	DXP reductoisomerase C-terminal domain
C3Y97_16925	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
C3Y97_16930	PF01594	AI-2E family transporter
C3Y97_16955	PF08003	Protein of unknown function (DUF1698)
C3Y97_16965	PF07690	Major Facilitator Superfamily
C3Y97_16985	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_16995	PF00571	CBS domain
C3Y97_16995	PF03471	Transporter associated domain
C3Y97_16995	PF01595	Cyclin M transmembrane N-terminal domain
C3Y97_17000	PF13411	MerR HTH family regulatory protein
C3Y97_17010	PF00483	Nucleotidyl transferase
C3Y97_17015	PF16363	GDP-mannose 4,6 dehydratase
C3Y97_17020	PF08484	C-methyltransferase C-terminal domain
C3Y97_17020	PF08421	Putative zinc binding domain
C3Y97_17025	PF01370	NAD dependent epimerase/dehydratase family
C3Y97_17040	PF00892	EamA-like transporter family
C3Y97_17050	PF00805	Pentapeptide repeats (8 copies)
C3Y97_17055	PF06906	Protein of unknown function (DUF1272)
C3Y97_17060	PF10282	Lactonase, 7-bladed beta-propeller
C3Y97_17065	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
C3Y97_17065	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
C3Y97_17070	PF02447	GntP family permease
C3Y97_17075	PF00923	Transaldolase/Fructose-6-phosphate aldolase
C3Y97_17080	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3Y97_17080	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
C3Y97_17085	PF02780	Transketolase, C-terminal domain
C3Y97_17085	PF02779	Transketolase, pyrimidine binding domain
C3Y97_17085	PF00456	Transketolase, thiamine diphosphate binding domain
C3Y97_17090	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
C3Y97_17090	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
C3Y97_17095	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
C3Y97_17095	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
C3Y97_17105	PF00107	Zinc-binding dehydrogenase
C3Y97_17105	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_17110	PF00296	Luciferase-like monooxygenase
C3Y97_17120	PF14765	Polyketide synthase dehydratase
C3Y97_17120	PF00107	Zinc-binding dehydrogenase
C3Y97_17120	PF00550	Phosphopantetheine attachment site
C3Y97_17120	PF08659	KR domain
C3Y97_17120	PF02801	Beta-ketoacyl synthase, C-terminal domain
C3Y97_17120	PF00109	Beta-ketoacyl synthase, N-terminal domain
C3Y97_17120	PF16197	Ketoacyl-synthetase C-terminal extension
C3Y97_17120	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_17120	PF00698	Acyl transferase domain
C3Y97_17130	PF00106	short chain dehydrogenase
C3Y97_17135	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3Y97_17135	PF03413	Peptidase propeptide and YPEB domain
C3Y97_17135	PF01447	Thermolysin metallopeptidase, catalytic domain
C3Y97_17135	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3Y97_17145	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_17145	PF00672	HAMP domain
C3Y97_17145	PF12729	Four helix bundle sensory module for signal transduction
C3Y97_17150	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
C3Y97_17155	PF01872	RibD C-terminal domain
C3Y97_17155	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3Y97_17160	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
C3Y97_17160	PF00925	GTP cyclohydrolase II
C3Y97_17165	PF01638	HxlR-like helix-turn-helix
C3Y97_17185	PF00248	Aldo/keto reductase family
C3Y97_17190	PF07690	Major Facilitator Superfamily
C3Y97_17200	PF03928	Haem-degrading
C3Y97_17220	PF08274	PhnA Zinc-Ribbon 
C3Y97_17220	PF03831	PhnA domain
C3Y97_17225	PF01740	STAS domain
C3Y97_17225	PF00916	Sulfate permease family
C3Y97_17265	PF03960	ArsC family
C3Y97_17275	PF01638	HxlR-like helix-turn-helix
C3Y97_17280	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_17280	PF07702	UTRA domain
C3Y97_17285	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3Y97_17285	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
C3Y97_17295	PF01638	HxlR-like helix-turn-helix
C3Y97_17300	PF01638	HxlR-like helix-turn-helix
C3Y97_17305	PF00248	Aldo/keto reductase family
C3Y97_17345	PF02567	Phenazine biosynthesis-like protein
C3Y97_17350	PF00501	AMP-binding enzyme
C3Y97_17350	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_17355	PF02525	Flavodoxin-like fold
C3Y97_17360	PF01638	HxlR-like helix-turn-helix
C3Y97_17370	PF01022	Bacterial regulatory protein, arsR family
C3Y97_17385	PF01522	Polysaccharide deacetylase
C3Y97_17385	PF18627	Peptidoglycan GlcNAc deacetylase N-terminal domain
C3Y97_17390	PF12791	Anti-sigma factor N-terminus
C3Y97_17395	PF04542	Sigma-70 region 2 
C3Y97_17400	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
C3Y97_17400	PF00535	Glycosyl transferase family 2
C3Y97_17405	PF01810	LysE type translocator
C3Y97_17440	PF01061	ABC-2 type transporter
C3Y97_17445	PF13732	Domain of unknown function (DUF4162)
C3Y97_17445	PF00005	ABC transporter
C3Y97_17465	PF03063	Prismane/CO dehydrogenase family
C3Y97_17475	PF00753	Metallo-beta-lactamase superfamily
C3Y97_17480	PF01183	Glycosyl hydrolases family 25
C3Y97_17480	PF01471	Putative peptidoglycan binding domain
C3Y97_17540	PF00753	Metallo-beta-lactamase superfamily
C3Y97_17550	PF00324	Amino acid permease
C3Y97_17555	PF07690	Major Facilitator Superfamily
C3Y97_17585	PF02585	GlcNAc-PI de-N-acetylase
C3Y97_17590	PF08830	Protein of unknown function (DUF1806)
C3Y97_17595	PF03600	Citrate transporter
C3Y97_17610	PF01497	Periplasmic binding protein
C3Y97_17615	PF01032	FecCD transport family
C3Y97_17620	PF01032	FecCD transport family
C3Y97_17625	PF05675	Protein of unknown function (DUF817)
C3Y97_17630	PF13170	Protein of unknown function (DUF4003)
C3Y97_17645	PF13302	Acetyltransferase (GNAT) domain
C3Y97_17650	PF10901	Protein of unknown function (DUF2690)
C3Y97_17660	PF03466	LysR substrate binding domain
C3Y97_17660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_17665	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_17665	PF00107	Zinc-binding dehydrogenase
C3Y97_17685	PF09154	Domain of unknown function (DUF1939)
C3Y97_17685	PF00128	Alpha amylase, catalytic domain
C3Y97_17690	PF00797	N-acetyltransferase
C3Y97_17695	PF08439	Oligopeptidase F
C3Y97_17695	PF01432	Peptidase family M3
C3Y97_17720	PF06146	Phosphate-starvation-inducible E
C3Y97_17725	PF04371	Porphyromonas-type peptidyl-arginine deiminase
C3Y97_17730	PF00144	Beta-lactamase
C3Y97_17745	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_17745	PF03466	LysR substrate binding domain
C3Y97_17755	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3Y97_17760	PF01494	FAD binding domain
C3Y97_17765	PF01022	Bacterial regulatory protein, arsR family
C3Y97_17770	PF00107	Zinc-binding dehydrogenase
C3Y97_17770	PF08240	Alcohol dehydrogenase GroES-like domain
C3Y97_17775	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
C3Y97_17780	PF18801	response regulator aspartate phosphatase H, N terminal
C3Y97_17780	PF17874	MalT-like TPR region
C3Y97_17810	PF01565	FAD binding domain 
C3Y97_17810	PF02913	FAD linked oxidases, C-terminal domain
C3Y97_17835	PF01066	CDP-alcohol phosphatidyltransferase
C3Y97_17850	PF00581	Rhodanese-like domain
C3Y97_17850	PF00753	Metallo-beta-lactamase superfamily
C3Y97_17855	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_17865	PF00483	Nucleotidyl transferase
C3Y97_17875	PF01370	NAD dependent epimerase/dehydratase family
C3Y97_17880	PF16363	GDP-mannose 4,6 dehydratase
C3Y97_17885	PF18801	response regulator aspartate phosphatase H, N terminal
C3Y97_17895	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_17895	PF00672	HAMP domain
C3Y97_17895	PF02743	Cache domain
C3Y97_18075	PF04225	Opacity-associated protein A LysM-like domain
C3Y97_18075	PF01551	Peptidase family M23
C3Y97_18175	PF00082	Subtilase family
C3Y97_18220	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_18220	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_18220	PF18719	ArlS sensor domain
C3Y97_18225	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_18225	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_18225	PF00989	PAS fold
C3Y97_18225	PF16736	Single Cache-like 
C3Y97_18230	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_18230	PF00072	Response regulator receiver domain
C3Y97_18235	PF06725	3D domain
C3Y97_18235	PF01476	LysM domain
C3Y97_18285	PF01476	LysM domain
C3Y97_18285	PF01510	N-acetylmuramoyl-L-alanine amidase
C3Y97_18285	PF01471	Putative peptidoglycan binding domain
C3Y97_18305	PF03960	ArsC family
C3Y97_18350	PF00563	EAL domain
C3Y97_18350	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_18350	PF03707	Bacterial signalling protein N terminal repeat
C3Y97_18380	PF00989	PAS fold
C3Y97_18380	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_18380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_18390	PF02308	MgtC family
C3Y97_18400	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_18405	PF04294	VanW like protein
C3Y97_18415	PF13037	Domain of unknown function (DUF3898)
C3Y97_18415	PF13039	Protein of unknown function (DUF3900)
C3Y97_18435	PF00313	'Cold-shock' DNA-binding domain
C3Y97_18445	PF00258	Flavodoxin
C3Y97_18465	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_18475	PF00106	short chain dehydrogenase
C3Y97_18485	PF14698	Argininosuccinate lyase C-terminal
C3Y97_18485	PF00206	Lyase
C3Y97_18495	PF01156	Inosine-uridine preferring nucleoside hydrolase
C3Y97_18500	PF00474	Sodium:solute symporter family
C3Y97_18510	PF00171	Aldehyde dehydrogenase family
C3Y97_18520	PF14151	YfhD-like protein
C3Y97_18525	PF13243	Squalene-hopene cyclase C-terminal domain
C3Y97_18525	PF13249	Squalene-hopene cyclase N-terminal domain
C3Y97_18530	PF02681	Divergent PAP2 family
C3Y97_18535	PF00892	EamA-like transporter family
C3Y97_18540	PF06961	Protein of unknown function (DUF1294)
C3Y97_18555	PF10609	NUBPL iron-transfer P-loop NTPase
C3Y97_18565	PF02391	MoaE protein
C3Y97_18570	PF03454	MoeA C-terminal region (domain IV)
C3Y97_18570	PF03453	MoeA N-terminal region (domain I and II)
C3Y97_18570	PF00994	Probable molybdopterin binding domain
C3Y97_18575	PF00899	ThiF family
C3Y97_18580	PF01226	Formate/nitrite transporter
C3Y97_18590	PF04055	Radical SAM superfamily
C3Y97_18590	PF06463	Molybdenum Cofactor Synthesis C
C3Y97_18595	PF02634	FdhD/NarQ family
C3Y97_18600	PF10057	Uncharacterized conserved protein (DUF2294)
C3Y97_18605	PF07849	Protein of unknown function (DUF1641)
C3Y97_18610	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
C3Y97_18610	PF00384	Molybdopterin oxidoreductase
C3Y97_18610	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C3Y97_18610	PF01568	Molydopterin dinucleotide binding domain
C3Y97_18610	PF00037	4Fe-4S binding domain
C3Y97_18615	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_18630	PF13520	Amino acid permease
C3Y97_18665	PF08241	Methyltransferase domain
C3Y97_18670	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_18675	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_18680	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
C3Y97_18685	PF03816	Cell envelope-related transcriptional attenuator domain
C3Y97_18695	PF08281	Sigma-70, region 4
C3Y97_18695	PF04542	Sigma-70 region 2 
C3Y97_18705	PF00005	ABC transporter
C3Y97_18705	PF13732	Domain of unknown function (DUF4162)
C3Y97_18725	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
C3Y97_18725	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3Y97_18730	PF00521	DNA gyrase/topoisomerase IV, subunit A
C3Y97_18730	PF03989	DNA gyrase C-terminal domain, beta-propeller
C3Y97_18735	PF01751	Toprim domain
C3Y97_18735	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_18735	PF00204	DNA gyrase B
C3Y97_18735	PF00986	DNA gyrase B subunit, carboxyl terminus
C3Y97_18745	PF13380	CoA binding domain
C3Y97_18750	PF13180	PDZ domain
C3Y97_18755	PF00072	Response regulator receiver domain
C3Y97_18755	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_18760	PF04055	Radical SAM superfamily
C3Y97_18765	PF13597	Anaerobic ribonucleoside-triphosphate reductase
C3Y97_18765	PF03477	ATP cone domain
C3Y97_18770	PF02660	Glycerol-3-phosphate acyltransferase
C3Y97_18780	PF03061	Thioesterase superfamily
C3Y97_18785	PF00704	Glycosyl hydrolases family 18
C3Y97_18785	PF01476	LysM domain
C3Y97_18795	PF08177	Small acid-soluble spore protein N family
C3Y97_18800	PF13040	Fur-regulated basic protein B
C3Y97_18805	PF00929	Exonuclease
C3Y97_18805	PF07733	Bacterial DNA polymerase III alpha NTPase domain
C3Y97_18805	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
C3Y97_18805	PF14579	Helix-hairpin-helix motif
C3Y97_18805	PF02811	PHP domain
C3Y97_18805	PF01336	OB-fold nucleic acid binding domain
C3Y97_18805	PF11490	DNA polymerase III polC-type N-terminus II
C3Y97_18810	PF00578	AhpC/TSA family
C3Y97_18825	PF00664	ABC transporter transmembrane region
C3Y97_18825	PF00005	ABC transporter
C3Y97_18830	PF00694	Aconitase C-terminal domain
C3Y97_18830	PF00330	Aconitase family (aconitate hydratase)
C3Y97_18840	PF01522	Polysaccharide deacetylase
C3Y97_18850	PF08179	Small acid-soluble spore protein P family
C3Y97_18860	PF07690	Major Facilitator Superfamily
C3Y97_18870	PF02272	DHHA1 domain
C3Y97_18870	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3Y97_18870	PF01411	tRNA synthetases class II (A)
C3Y97_18875	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_18875	PF00293	NUDIX domain
C3Y97_18885	PF00108	Thiolase, N-terminal domain
C3Y97_18885	PF02803	Thiolase, C-terminal domain
C3Y97_18895	PF02632	BioY family
C3Y97_18900	PF00501	AMP-binding enzyme
C3Y97_18900	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_18925	PF05532	CsbD-like
C3Y97_18945	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_18945	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_18960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_18960	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_18960	PF00989	PAS fold
C3Y97_18960	PF13426	PAS domain
C3Y97_18960	PF13188	PAS domain
C3Y97_18965	PF01738	Dienelactone hydrolase family
C3Y97_18970	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_18975	PF00474	Sodium:solute symporter family
C3Y97_18980	PF01645	Conserved region in glutamate synthase
C3Y97_18985	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
C3Y97_18990	PF02559	CarD-like/TRCF domain
C3Y97_18995	PF00491	Arginase family
C3Y97_19000	PF01979	Amidohydrolase family
C3Y97_19005	PF17391	Urocanase N-terminal domain
C3Y97_19005	PF01175	Urocanase Rossmann-like domain
C3Y97_19005	PF17392	Urocanase C-terminal domain
C3Y97_19010	PF00221	Aromatic amino acid lyase
C3Y97_19015	PF09021	HutP
C3Y97_19050	PF11084	Protein of unknown function (DUF2621)
C3Y97_19055	PF07301	Protein of unknown function (DUF1453)
C3Y97_19060	PF02683	Cytochrome C biogenesis protein transmembrane region
C3Y97_19085	PF00005	ABC transporter
C3Y97_19100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_19100	PF03466	LysR substrate binding domain
C3Y97_19105	PF03788	LrgA family
C3Y97_19110	PF04172	LrgB-like family 
C3Y97_19115	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_19115	PF00293	NUDIX domain
C3Y97_19125	PF01925	Sulfite exporter TauE/SafE
C3Y97_19145	PF08239	Bacterial SH3 domain
C3Y97_19145	PF01183	Glycosyl hydrolases family 25
C3Y97_19150	PF00664	ABC transporter transmembrane region
C3Y97_19150	PF00005	ABC transporter
C3Y97_19155	PF00664	ABC transporter transmembrane region
C3Y97_19155	PF00005	ABC transporter
C3Y97_19160	PF03672	Uncharacterised protein family (UPF0154)
C3Y97_19165	PF10747	Sporulation inhibitor of replication protein SirA 
C3Y97_19170	PF02780	Transketolase, C-terminal domain
C3Y97_19170	PF02779	Transketolase, pyrimidine binding domain
C3Y97_19170	PF00456	Transketolase, thiamine diphosphate binding domain
C3Y97_19175	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_19180	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_19185	PF00005	ABC transporter
C3Y97_19190	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3Y97_19195	PF02872	5'-nucleotidase, C-terminal domain
C3Y97_19195	PF00149	Calcineurin-like phosphoesterase
C3Y97_19200	PF05979	Bacterial protein of unknown function (DUF896)
C3Y97_19205	PF00239	Resolvase, N terminal domain
C3Y97_19210	PF01726	LexA DNA binding domain
C3Y97_19210	PF00717	Peptidase S24-like
C3Y97_19225	PF03551	Transcriptional regulator PadR-like family
C3Y97_19230	PF03951	Glutamine synthetase, beta-Grasp domain
C3Y97_19230	PF00120	Glutamine synthetase, catalytic domain
C3Y97_19235	PF13411	MerR HTH family regulatory protein
C3Y97_19240	PF06838	Methionine gamma-lyase 
C3Y97_19245	PF16360	GTP-binding GTPase Middle Region
C3Y97_19245	PF13167	GTP-binding GTPase N-terminal
C3Y97_19245	PF01926	50S ribosome-binding GTPase
C3Y97_19250	PF03458	UPF0126 domain
C3Y97_19255	PF00004	ATPase family associated with various cellular activities (AAA)
C3Y97_19255	PF17866	AAA lid domain
C3Y97_19270	PF17209	Hfq protein
C3Y97_19285	PF06725	3D domain
C3Y97_19285	PF01476	LysM domain
C3Y97_19295	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
C3Y97_19295	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3Y97_19300	PF00294	pfkB family carbohydrate kinase
C3Y97_19305	PF00455	DeoR C terminal sensor domain
C3Y97_19305	PF08220	DeoR-like helix-turn-helix domain
C3Y97_19310	PF00465	Iron-containing alcohol dehydrogenase 
C3Y97_19315	PF04238	Protein of unknown function (DUF420)
C3Y97_19330	PF00324	Amino acid permease
C3Y97_19340	PF00041	Fibronectin type III domain
C3Y97_19340	PF00704	Glycosyl hydrolases family 18
C3Y97_19345	PF10518	TAT (twin-arginine translocation) pathway signal sequence
C3Y97_19345	PF00149	Calcineurin-like phosphoesterase
C3Y97_19350	PF01226	Formate/nitrite transporter
C3Y97_19355	PF00216	Bacterial DNA-binding protein
C3Y97_19365	PF00403	Heavy-metal-associated domain
C3Y97_19370	PF00403	Heavy-metal-associated domain
C3Y97_19375	PF02583	Metal-sensitive transcriptional repressor
C3Y97_19385	PF00756	Putative esterase
C3Y97_19390	PF00005	ABC transporter
C3Y97_19395	PF01032	FecCD transport family
C3Y97_19400	PF01032	FecCD transport family
C3Y97_19405	PF01497	Periplasmic binding protein
C3Y97_19415	PF03372	Endonuclease/Exonuclease/phosphatase family
C3Y97_19420	PF12833	Helix-turn-helix domain
C3Y97_19420	PF02805	Metal binding domain of Ada
C3Y97_19425	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
C3Y97_19425	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
C3Y97_19430	PF00730	HhH-GPD superfamily base excision DNA repair protein
C3Y97_19430	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
C3Y97_19435	PF01546	Peptidase family M20/M25/M40
C3Y97_19435	PF07687	Peptidase dimerisation domain
C3Y97_19450	PF00561	alpha/beta hydrolase fold
C3Y97_19455	PF03707	Bacterial signalling protein N terminal repeat
C3Y97_19455	PF00563	EAL domain
C3Y97_19455	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_19460	PF04101	Glycosyltransferase family 28 C-terminal domain
C3Y97_19460	PF03033	Glycosyltransferase family 28 N-terminal domain
C3Y97_19470	PF16363	GDP-mannose 4,6 dehydratase
C3Y97_19475	PF08485	Polysaccharide biosynthesis protein C-terminal
C3Y97_19475	PF02719	Polysaccharide biosynthesis protein
C3Y97_19490	PF10787	Uncharacterised protein from bacillus cereus group
C3Y97_19495	PF04172	LrgB-like family 
C3Y97_19500	PF03788	LrgA family
C3Y97_19505	PF00155	Aminotransferase class I and II
C3Y97_19505	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_19515	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_19515	PF07702	UTRA domain
C3Y97_19520	PF00232	Glycosyl hydrolase family 1
C3Y97_19525	PF00388	Phosphatidylinositol-specific phospholipase C, X domain
C3Y97_19530	PF00082	Subtilase family
C3Y97_19535	PF07486	Cell Wall Hydrolase
C3Y97_19550	PF00884	Sulfatase
C3Y97_19555	PF00350	Dynamin family
C3Y97_19565	PF01119	DNA mismatch repair protein, C-terminal domain
C3Y97_19565	PF08676	MutL C terminal dimerisation domain
C3Y97_19570	PF00488	MutS domain V
C3Y97_19570	PF05190	MutS family domain IV
C3Y97_19570	PF05192	MutS domain III
C3Y97_19570	PF01624	MutS domain I
C3Y97_19570	PF05188	MutS domain II
C3Y97_19575	PF10628	Outer spore coat protein E (CotE)
C3Y97_19580	PF06133	Control of competence regulator ComK, YlbF/YmcA
C3Y97_19585	PF04055	Radical SAM superfamily
C3Y97_19585	PF01938	TRAM domain
C3Y97_19585	PF00919	Uncharacterized protein family UPF0004
C3Y97_19590	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3Y97_19595	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
C3Y97_19595	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
C3Y97_19595	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
C3Y97_19600	PF01244	Membrane dipeptidase (Peptidase family M19)
C3Y97_19605	PF04232	Stage V sporulation protein S (SpoVS)
C3Y97_19610	PF13277	YmdB-like protein
C3Y97_19615	PF12072	Domain of unknown function (DUF3552)
C3Y97_19615	PF00013	KH domain
C3Y97_19615	PF01966	HD domain
C3Y97_19620	PF00154	recA bacterial DNA recombination protein
C3Y97_19625	PF00994	Probable molybdopterin binding domain
C3Y97_19625	PF18146	Damage-inducible protein CinA KH domain
C3Y97_19625	PF02464	Competence-damaged protein
C3Y97_19630	PF01066	CDP-alcohol phosphatidyltransferase
C3Y97_19635	PF13464	Domain of unknown function (DUF4115)
C3Y97_19640	PF11868	Protein of unknown function (DUF3388)
C3Y97_19645	PF11588	Protein of unknown function (DUF3243)
C3Y97_19655	PF05193	Peptidase M16 inactive domain
C3Y97_19655	PF00675	Insulinase (Peptidase family M16)
C3Y97_19660	PF05193	Peptidase M16 inactive domain
C3Y97_19685	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_19685	PF07702	UTRA domain
C3Y97_19695	PF09397	Ftsk gamma domain
C3Y97_19695	PF01580	FtsK/SpoIIIE family
C3Y97_19695	PF17854	FtsK alpha domain
C3Y97_19700	PF14035	YlzJ-like protein
C3Y97_19705	PF00574	Clp protease
C3Y97_19710	PF00753	Metallo-beta-lactamase superfamily
C3Y97_19710	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
C3Y97_19710	PF17770	Ribonuclease J C-terminal domain
C3Y97_19715	PF00701	Dihydrodipicolinate synthetase family
C3Y97_19720	PF13840	ACT domain 
C3Y97_19720	PF00696	Amino acid kinase family
C3Y97_19725	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3Y97_19725	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3Y97_19730	PF02441	Flavoprotein
C3Y97_19735	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
C3Y97_19735	PF16924	Dipicolinate synthase subunit A N-terminal domain
C3Y97_19740	PF05239	PRC-barrel domain
C3Y97_19745	PF00675	Insulinase (Peptidase family M16)
C3Y97_19745	PF05193	Peptidase M16 inactive domain
C3Y97_19750	PF01522	Polysaccharide deacetylase
C3Y97_19755	PF00575	S1 RNA binding domain
C3Y97_19755	PF03725	3' exoribonuclease family, domain 2
C3Y97_19755	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
C3Y97_19755	PF00013	KH domain
C3Y97_19755	PF01138	3' exoribonuclease family, domain 1
C3Y97_19760	PF00312	Ribosomal protein S15
C3Y97_19765	PF01687	Riboflavin kinase
C3Y97_19765	PF06574	FAD synthetase
C3Y97_19770	PF16198	tRNA pseudouridylate synthase B C-terminal domain
C3Y97_19770	PF01509	TruB family pseudouridylate synthase (N terminal domain)
C3Y97_19775	PF02033	Ribosome-binding factor A
C3Y97_19780	PF04456	Protein of unknown function (DUF503)
C3Y97_19785	PF00009	Elongation factor Tu GTP binding domain
C3Y97_19785	PF11987	Translation-initiation factor 2
C3Y97_19785	PF04760	Translation initiation factor IF-2, N-terminal region
C3Y97_19790	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
C3Y97_19795	PF04296	Protein of unknown function (DUF448)
C3Y97_19800	PF08529	NusA N-terminal domain
C3Y97_19800	PF00575	S1 RNA binding domain
C3Y97_19800	PF13184	NusA-like KH domain
C3Y97_19805	PF17384	RimP C-terminal SH3 domain
C3Y97_19805	PF02576	RimP N-terminal domain
C3Y97_19810	PF00929	Exonuclease
C3Y97_19810	PF02811	PHP domain
C3Y97_19810	PF14579	Helix-hairpin-helix motif
C3Y97_19810	PF14480	DNA polymerase III polC-type N-terminus I
C3Y97_19810	PF11490	DNA polymerase III polC-type N-terminus II
C3Y97_19810	PF07733	Bacterial DNA polymerase III alpha NTPase domain
C3Y97_19810	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
C3Y97_19820	PF03129	Anticodon binding domain
C3Y97_19820	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3Y97_19820	PF04073	Aminoacyl-tRNA editing domain
C3Y97_19825	PF02163	Peptidase family M50
C3Y97_19825	PF17820	PDZ domain
C3Y97_19830	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
C3Y97_19830	PF13288	DXP reductoisomerase C-terminal domain
C3Y97_19830	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
C3Y97_19840	PF01255	Putative undecaprenyl diphosphate synthase
C3Y97_19845	PF01765	Ribosome recycling factor
C3Y97_19850	PF00696	Amino acid kinase family
C3Y97_19855	PF00889	Elongation factor TS
C3Y97_19860	PF00318	Ribosomal protein S2
C3Y97_19865	PF08222	CodY helix-turn-helix domain
C3Y97_19865	PF06018	CodY GAF-like domain
C3Y97_19870	PF07724	AAA domain (Cdc48 subfamily)
C3Y97_19870	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3Y97_19870	PF00004	ATPase family associated with various cellular activities (AAA)
C3Y97_19875	PF00227	Proteasome subunit
C3Y97_19880	PF00589	Phage integrase family
C3Y97_19880	PF02899	Phage integrase, N-terminal SAM-like domain
C3Y97_19885	PF01134	Glucose inhibited division protein A
C3Y97_19890	PF01131	DNA topoisomerase
C3Y97_19890	PF01396	Topoisomerase DNA binding C4 zinc finger
C3Y97_19890	PF01751	Toprim domain
C3Y97_19895	PF02481	DNA recombination-mediator protein A
C3Y97_19900	PF00549	CoA-ligase
C3Y97_19900	PF02629	CoA binding domain
C3Y97_19905	PF00549	CoA-ligase
C3Y97_19905	PF08442	ATP-grasp domain
C3Y97_19910	PF01351	Ribonuclease HII
C3Y97_19915	PF01926	50S ribosome-binding GTPase
C3Y97_19920	PF10502	Signal peptidase, peptidase S26 
C3Y97_19925	PF01245	Ribosomal protein L19
C3Y97_19930	PF01746	tRNA (Guanine-1)-methyltransferase
C3Y97_19935	PF01782	RimM N-terminal domain
C3Y97_19935	PF05239	PRC-barrel domain
C3Y97_19945	PF00886	Ribosomal protein S16
C3Y97_19950	PF02881	SRP54-type protein, helical bundle domain
C3Y97_19950	PF00448	SRP54-type protein, GTPase domain
C3Y97_19950	PF02978	Signal peptide binding domain
C3Y97_19955	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
C3Y97_19960	PF02881	SRP54-type protein, helical bundle domain
C3Y97_19960	PF00448	SRP54-type protein, GTPase domain
C3Y97_19965	PF02463	RecF/RecN/SMC N terminal domain
C3Y97_19965	PF06470	SMC proteins Flexible Hinge Domain
C3Y97_19970	PF14622	Ribonuclease-III-like
C3Y97_19970	PF00035	Double-stranded RNA binding motif
C3Y97_19975	PF00550	Phosphopantetheine attachment site
C3Y97_19985	PF00698	Acyl transferase domain
C3Y97_19990	PF02504	Fatty acid synthesis protein
C3Y97_19995	PF03061	Thioesterase superfamily
C3Y97_20000	PF00270	DEAD/DEAH box helicase
C3Y97_20000	PF00271	Helicase conserved C-terminal domain
C3Y97_20000	PF17191	RecG wedge domain
C3Y97_20005	PF02734	DAK2 domain
C3Y97_20005	PF13684	Dihydroxyacetone kinase family
C3Y97_20010	PF03780	Asp23 family, cell envelope-related function
C3Y97_20015	PF00830	Ribosomal L28 family
C3Y97_20020	PF08183	Stage V sporulation protein family
C3Y97_20025	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
C3Y97_20025	PF04263	Thiamin pyrophosphokinase, catalytic domain
C3Y97_20030	PF00834	Ribulose-phosphate 3 epimerase family
C3Y97_20035	PF16745	RsgA N-terminal domain
C3Y97_20035	PF03193	RsgA GTPase
C3Y97_20040	PF00069	Protein kinase domain
C3Y97_20040	PF03793	PASTA domain
C3Y97_20050	PF04055	Radical SAM superfamily
C3Y97_20055	PF01189	16S rRNA methyltransferase RsmB/F
C3Y97_20055	PF01029	NusB family
C3Y97_20060	PF00551	Formyl transferase
C3Y97_20060	PF02911	Formyl transferase, C-terminal domain
C3Y97_20065	PF01327	Polypeptide deformylase
C3Y97_20070	PF18074	Primosomal protein N C-terminal domain
C3Y97_20070	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
C3Y97_20070	PF17764	3′ DNA-binding domain (3′BD)
C3Y97_20070	PF04851	Type III restriction enzyme, res subunit
C3Y97_20070	PF00271	Helicase conserved C-terminal domain
C3Y97_20075	PF04127	DNA / pantothenate metabolism flavoprotein
C3Y97_20075	PF02441	Flavoprotein
C3Y97_20080	PF01192	RNA polymerase Rpb6 
C3Y97_20085	PF00625	Guanylate kinase
C3Y97_20090	PF04025	Domain of unknown function (DUF370)
C3Y97_20095	PF08340	Domain of unknown function (DUF1732)
C3Y97_20095	PF03755	YicC-like family, N-terminal region 
C3Y97_20100	PF00690	Cation transporter/ATPase, N-terminus
C3Y97_20100	PF00689	Cation transporting ATPase, C-terminus
C3Y97_20110	PF00557	Metallopeptidase family M24
C3Y97_20110	PF01321	Creatinase/Prolidase N-terminal domain
C3Y97_20135	PF00156	Phosphoribosyl transferase domain
C3Y97_20140	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
C3Y97_20145	PF01180	Dihydroorotate dehydrogenase
C3Y97_20150	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
C3Y97_20155	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3Y97_20155	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C3Y97_20155	PF02142	MGS-like domain
C3Y97_20160	PF00117	Glutamine amidotransferase class-I
C3Y97_20160	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
C3Y97_20165	PF01979	Amidohydrolase family
C3Y97_20170	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3Y97_20170	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3Y97_20175	PF00860	Permease family
C3Y97_20180	PF00156	Phosphoribosyl transferase domain
C3Y97_20185	PF00849	RNA pseudouridylate synthase
C3Y97_20185	PF01479	S4 domain
C3Y97_20190	PF01252	Signal peptidase (SPase) II
C3Y97_20200	PF00133	tRNA synthetases class I (I, L, M and V)
C3Y97_20200	PF08264	Anticodon-binding domain of tRNA
C3Y97_20200	PF06827	Zinc finger found in FPG and IleRS
C3Y97_20205	PF05103	DivIVA protein
C3Y97_20210	PF01479	S4 domain
C3Y97_20210	PF17774	Putative RNA-binding domain in YlmH
C3Y97_20215	PF02325	YGGT family
C3Y97_20220	PF04472	Cell division protein SepF
C3Y97_20225	PF01168	Alanine racemase, N-terminal domain
C3Y97_20235	PF05239	PRC-barrel domain
C3Y97_20240	PF04542	Sigma-70 region 2 
C3Y97_20240	PF04539	Sigma-70 region 3
C3Y97_20240	PF04545	Sigma-70, region 4
C3Y97_20245	PF04545	Sigma-70, region 4
C3Y97_20245	PF04542	Sigma-70 region 2 
C3Y97_20250	PF03419	Sporulation factor SpoIIGA 
C3Y97_20255	PF00091	Tubulin/FtsZ family, GTPase domain
C3Y97_20255	PF12327	FtsZ family, C-terminal domain
C3Y97_20260	PF02491	SHS2 domain inserted in FTSA
C3Y97_20265	PF03799	Cell division protein FtsQ
C3Y97_20265	PF08478	POTRA domain, FtsQ-type
C3Y97_20270	PF01565	FAD binding domain 
C3Y97_20270	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
C3Y97_20275	PF03033	Glycosyltransferase family 28 N-terminal domain
C3Y97_20275	PF04101	Glycosyltransferase family 28 C-terminal domain
C3Y97_20280	PF01098	Cell cycle protein
C3Y97_20285	PF08245	Mur ligase middle domain
C3Y97_20285	PF02875	Mur ligase family, glutamate ligase domain
C3Y97_20290	PF00953	Glycosyl transferase family 4
C3Y97_20290	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
C3Y97_20295	PF02875	Mur ligase family, glutamate ligase domain
C3Y97_20295	PF08245	Mur ligase middle domain
C3Y97_20295	PF01225	Mur ligase family, catalytic domain
C3Y97_20300	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_20300	PF03793	PASTA domain
C3Y97_20300	PF03717	Penicillin-binding Protein dimerisation domain
C3Y97_20310	PF04977	Septum formation initiator
C3Y97_20315	PF01795	MraW methylase family
C3Y97_20320	PF10079	Bacillithiol biosynthesis BshC 
C3Y97_20325	PF08546	Ketopantoate reductase PanE/ApbA C terminal
C3Y97_20325	PF02558	Ketopantoate reductase PanE/ApbA
C3Y97_20330	PF00583	Acetyltransferase (GNAT) family
C3Y97_20340	PF01783	Ribosomal L32p protein family
C3Y97_20345	PF02620	Large ribosomal RNA subunit accumulation protein YceD
C3Y97_20350	PF05636	HIGH Nucleotidyl Transferase
C3Y97_20355	PF05362	Lon protease (S16) C-terminal proteolytic domain
C3Y97_20355	PF13180	PDZ domain
C3Y97_20360	PF01734	Patatin-like phospholipase
C3Y97_20365	PF07670	Nucleoside recognition
C3Y97_20370	PF01467	Cytidylyltransferase-like
C3Y97_20385	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
C3Y97_20390	PF06133	Control of competence regulator ComK, YlbF/YmcA
C3Y97_20395	PF00300	Histidine phosphatase superfamily (branch 1)
C3Y97_20400	PF14003	YlbE-like protein
C3Y97_20405	PF14071	Putative coat protein
C3Y97_20410	PF14504	CAP-associated N-terminal
C3Y97_20410	PF00188	Cysteine-rich secretory protein family
C3Y97_20415	PF08868	YugN-like family
C3Y97_20420	PF00795	Carbon-nitrogen hydrolase
C3Y97_20425	PF09678	Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
C3Y97_20430	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
C3Y97_20435	PF00510	Cytochrome c oxidase subunit III
C3Y97_20440	PF00115	Cytochrome C and Quinol oxidase polypeptide I
C3Y97_20445	PF00034	Cytochrome c
C3Y97_20445	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
C3Y97_20445	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
C3Y97_20450	PF01040	UbiA prenyltransferase family
C3Y97_20455	PF02628	Cytochrome oxidase assembly protein
C3Y97_20460	PF02436	Conserved carboxylase domain
C3Y97_20460	PF00682	HMGL-like
C3Y97_20460	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3Y97_20460	PF00364	Biotin-requiring enzyme
C3Y97_20460	PF00289	Biotin carboxylase, N-terminal domain
C3Y97_20460	PF02785	Biotin carboxylase C-terminal domain
C3Y97_20470	PF01098	Cell cycle protein
C3Y97_20475	PF07408	Protein of unknown function (DUF1507)
C3Y97_20485	PF13638	PIN domain
C3Y97_20485	PF02562	PhoH-like protein
C3Y97_20495	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
C3Y97_20505	PF14036	YlaH-like protein
C3Y97_20520	PF00459	Inositol monophosphatase family
C3Y97_20530	PF06335	Protein of unknown function (DUF1054)
C3Y97_20535	PF05256	Uncharacterised protein family (UPF0223)
C3Y97_20540	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
C3Y97_20540	PF01276	Orn/Lys/Arg decarboxylase, major domain
C3Y97_20580	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_20580	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3Y97_20585	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3Y97_20585	PF00364	Biotin-requiring enzyme
C3Y97_20585	PF02817	e3 binding domain
C3Y97_20590	PF02779	Transketolase, pyrimidine binding domain
C3Y97_20590	PF02780	Transketolase, C-terminal domain
C3Y97_20595	PF00676	Dehydrogenase E1 component
C3Y97_20605	PF01327	Polypeptide deformylase
C3Y97_20625	PF17770	Ribonuclease J C-terminal domain
C3Y97_20625	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
C3Y97_20625	PF00753	Metallo-beta-lactamase superfamily
C3Y97_20630	PF02254	TrkA-N domain
C3Y97_20630	PF02080	TrkA-C domain
C3Y97_20640	PF07687	Peptidase dimerisation domain
C3Y97_20640	PF01546	Peptidase family M20/M25/M40
C3Y97_20645	PF14602	Hexapeptide repeat of succinyl-transferase
C3Y97_20645	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_20645	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
C3Y97_20650	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_20650	PF03466	LysR substrate binding domain
C3Y97_20665	PF04308	Ribonuclease H-like
C3Y97_20675	PF08796	Protein of unknown function (DUF1797)
C3Y97_20690	PF10388	EAL-domain associated signalling protein domain
C3Y97_20690	PF00563	EAL domain
C3Y97_20700	PF10518	TAT (twin-arginine translocation) pathway signal sequence
C3Y97_20700	PF00149	Calcineurin-like phosphoesterase
C3Y97_20710	PF02503	Polyphosphate kinase middle domain
C3Y97_20710	PF13089	Polyphosphate kinase N-terminal domain
C3Y97_20710	PF17941	Polyphosphate kinase C-terminal domain 1
C3Y97_20710	PF13090	Polyphosphate kinase C-terminal domain 2
C3Y97_20715	PF02541	Ppx/GppA phosphatase family
C3Y97_20720	PF14177	YkyB-like protein
C3Y97_20745	PF07690	Major Facilitator Superfamily
C3Y97_20755	PF01717	Cobalamin-independent synthase, Catalytic domain
C3Y97_20755	PF08267	Cobalamin-independent synthase, N-terminal domain
C3Y97_20765	PF14040	Deoxyribonuclease NucA/NucB
C3Y97_20780	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_20780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_20790	PF00155	Aminotransferase class I and II
C3Y97_20795	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_20795	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3Y97_20800	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_20805	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_20810	PF13416	Bacterial extracellular solute-binding protein
C3Y97_20815	PF02903	Alpha amylase, N-terminal ig-like domain
C3Y97_20815	PF16657	Maltogenic Amylase, C-terminal domain
C3Y97_20815	PF00128	Alpha amylase, catalytic domain
C3Y97_20820	PF16657	Maltogenic Amylase, C-terminal domain
C3Y97_20820	PF00128	Alpha amylase, catalytic domain
C3Y97_20825	PF03459	TOBE domain
C3Y97_20825	PF17912	MalK OB fold domain
C3Y97_20825	PF00005	ABC transporter
C3Y97_20865	PF02803	Thiolase, C-terminal domain
C3Y97_20865	PF00108	Thiolase, N-terminal domain
C3Y97_20900	PF03551	Transcriptional regulator PadR-like family
C3Y97_20920	PF01636	Phosphotransferase enzyme family
C3Y97_20925	PF00795	Carbon-nitrogen hydrolase
C3Y97_20930	PF00155	Aminotransferase class I and II
C3Y97_20935	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
C3Y97_20935	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
C3Y97_20945	PF00596	Class II Aldolase and Adducin N-terminal domain
C3Y97_20950	PF03079	ARD/ARD' family
C3Y97_20965	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
C3Y97_20965	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
C3Y97_20970	PF00144	Beta-lactamase
C3Y97_20975	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_20980	PF00881	Nitroreductase family
C3Y97_20995	PF02896	PEP-utilising enzyme, TIM barrel domain
C3Y97_20995	PF05524	PEP-utilising enzyme, N-terminal
C3Y97_20995	PF00391	PEP-utilising enzyme, mobile domain
C3Y97_21000	PF00381	PTS HPr component phosphorylation site
C3Y97_21005	PF02378	Phosphotransferase system, EIIC 
C3Y97_21005	PF00367	phosphotransferase system, EIIB
C3Y97_21005	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
C3Y97_21010	PF03123	CAT RNA binding domain
C3Y97_21010	PF00874	PRD domain
C3Y97_21025	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
C3Y97_21030	PF01979	Amidohydrolase family
C3Y97_21040	PF04079	Segregation and condensation complex subunit ScpB
C3Y97_21050	PF02616	Segregation and condensation protein ScpA
C3Y97_21060	PF03745	Domain of unknown function (DUF309)
C3Y97_21065	PF00583	Acetyltransferase (GNAT) family
C3Y97_21070	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
C3Y97_21075	PF06207	Protein of unknown function (DUF1002)
C3Y97_21085	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_21090	PF14097	Stage V sporulation protein AE1
C3Y97_21095	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3Y97_21100	PF07451	Stage V sporulation protein AD (SpoVAD)
C3Y97_21105	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3Y97_21110	PF13782	Stage V sporulation protein AB
C3Y97_21115	PF12164	Stage V sporulation protein AA
C3Y97_21125	PF00209	Sodium:neurotransmitter symporter family
C3Y97_21130	PF04545	Sigma-70, region 4
C3Y97_21130	PF04542	Sigma-70 region 2 
C3Y97_21130	PF04539	Sigma-70 region 3
C3Y97_21135	PF13581	Histidine kinase-like ATPase domain
C3Y97_21140	PF01740	STAS domain
C3Y97_21145	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_21145	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_21155	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_21160	PF00005	ABC transporter
C3Y97_21180	PF01047	MarR family
C3Y97_21190	PF00860	Permease family
C3Y97_21195	PF01544	CorA-like Mg2+ transporter protein
C3Y97_21200	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
C3Y97_21200	PF02885	Glycosyl transferase family, helical bundle domain
C3Y97_21200	PF00591	Glycosyl transferase family, a/b domain
C3Y97_21205	PF01048	Phosphorylase superfamily
C3Y97_21210	PF01676	Metalloenzyme superfamily
C3Y97_21215	PF13115	YtkA-like
C3Y97_21220	PF00589	Phage integrase family
C3Y97_21220	PF02899	Phage integrase, N-terminal SAM-like domain
C3Y97_21225	PF14004	Protein of unknown function (DUF4227)
C3Y97_21230	PF01475	Ferric uptake regulator family
C3Y97_21235	PF01944	Stage II sporulation protein M
C3Y97_21245	PF00293	NUDIX domain
C3Y97_21250	PF13072	Mother cell inhibitor of FtsZ
C3Y97_21255	PF00248	Aldo/keto reductase family
C3Y97_21260	PF00248	Aldo/keto reductase family
C3Y97_21265	PF13673	Acetyltransferase (GNAT) domain
C3Y97_21265	PF04229	GrpB protein
C3Y97_21275	PF02872	5'-nucleotidase, C-terminal domain
C3Y97_21275	PF00746	LPXTG cell wall anchor motif
C3Y97_21275	PF00149	Calcineurin-like phosphoesterase
C3Y97_21275	PF00565	Staphylococcal nuclease homologue
C3Y97_21285	PF12146	Serine aminopeptidase, S33
C3Y97_21290	PF13726	Na+-H+ antiporter family
C3Y97_21290	PF03553	Na+/H+ antiporter family
C3Y97_21295	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_21300	PF00583	Acetyltransferase (GNAT) family
C3Y97_21305	PF12146	Serine aminopeptidase, S33
C3Y97_21310	PF10827	Protein of unknown function (DUF2552) 
C3Y97_21320	PF01872	RibD C-terminal domain
C3Y97_21320	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3Y97_21325	PF00677	Lumazine binding domain
C3Y97_21330	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
C3Y97_21330	PF00925	GTP cyclohydrolase II
C3Y97_21335	PF00885	6,7-dimethyl-8-ribityllumazine synthase
C3Y97_21345	PF04055	Radical SAM superfamily
C3Y97_21345	PF06968	Biotin and Thiamin Synthesis associated domain
C3Y97_21350	PF13847	Methyltransferase domain
C3Y97_21355	PF12697	Alpha/beta hydrolase family
C3Y97_21355	PF08241	Methyltransferase domain
C3Y97_21360	PF00155	Aminotransferase class I and II
C3Y97_21370	PF00202	Aminotransferase class-III
C3Y97_21390	PF00149	Calcineurin-like phosphoesterase
C3Y97_21390	PF02872	5'-nucleotidase, C-terminal domain
C3Y97_21400	PF01037	Lrp/AsnC ligand binding domain
C3Y97_21400	PF13404	AsnC-type helix-turn-helix domain
C3Y97_21415	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
C3Y97_21415	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
C3Y97_21420	PF00202	Aminotransferase class-III
C3Y97_21425	PF00696	Amino acid kinase family
C3Y97_21430	PF01960	ArgJ family
C3Y97_21435	PF02774	Semialdehyde dehydrogenase, dimerisation domain
C3Y97_21435	PF01118	Semialdehyde dehydrogenase, NAD binding domain
C3Y97_21445	PF00106	short chain dehydrogenase
C3Y97_21450	PF00753	Metallo-beta-lactamase superfamily
C3Y97_21455	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3Y97_21455	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3Y97_21460	PF03313	Serine dehydratase alpha chain
C3Y97_21465	PF01842	ACT domain
C3Y97_21465	PF03315	Serine dehydratase beta chain
C3Y97_21475	PF12706	Beta-lactamase superfamily domain
C3Y97_21475	PF00753	Metallo-beta-lactamase superfamily
C3Y97_21490	PF00690	Cation transporter/ATPase, N-terminus
C3Y97_21490	PF00689	Cation transporting ATPase, C-terminus
C3Y97_21495	PF02308	MgtC family
C3Y97_21500	PF11798	IMS family HHH motif
C3Y97_21500	PF11799	impB/mucB/samB family C-terminal domain
C3Y97_21500	PF00817	impB/mucB/samB family
C3Y97_21505	PF07687	Peptidase dimerisation domain
C3Y97_21505	PF01546	Peptidase family M20/M25/M40
C3Y97_21510	PF13302	Acetyltransferase (GNAT) domain
C3Y97_21525	PF03734	L,D-transpeptidase catalytic domain
C3Y97_21530	PF11728	Putative aromatic acid exporter C-terminal domain
C3Y97_21530	PF06081	Aromatic acid exporter family member 1
C3Y97_21535	PF00005	ABC transporter
C3Y97_21540	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_21545	PF00497	Bacterial extracellular solute-binding proteins, family 3
C3Y97_21550	PF06491	Disulphide isomerase
C3Y97_21555	PF11208	Protein of unknown function (DUF2992)
C3Y97_21560	PF00293	NUDIX domain
C3Y97_21560	PF09297	NADH pyrophosphatase zinc ribbon domain
C3Y97_21565	PF04239	Protein of unknown function (DUF421)
C3Y97_21570	PF01098	Cell cycle protein
C3Y97_21580	PF02817	e3 binding domain
C3Y97_21580	PF00364	Biotin-requiring enzyme
C3Y97_21580	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
C3Y97_21585	PF02779	Transketolase, pyrimidine binding domain
C3Y97_21585	PF02780	Transketolase, C-terminal domain
C3Y97_21590	PF00676	Dehydrogenase E1 component
C3Y97_21595	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
C3Y97_21595	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_21600	PF00871	Acetokinase family
C3Y97_21605	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C3Y97_21605	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
C3Y97_21610	PF01515	Phosphate acetyl/butaryl transferase
C3Y97_21620	PF02954	Bacterial regulatory protein, Fis family
C3Y97_21620	PF00158	Sigma-54 interaction domain
C3Y97_21620	PF00989	PAS fold
C3Y97_21630	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3Y97_21635	PF14174	YycC-like protein
C3Y97_21645	PF08769	Sporulation initiation factor Spo0A C terminal
C3Y97_21645	PF00072	Response regulator receiver domain
C3Y97_21655	PF05580	SpoIVB peptidase S55
C3Y97_21655	PF17820	PDZ domain
C3Y97_21660	PF13476	AAA domain
C3Y97_21665	PF02863	Arginine repressor, C-terminal domain
C3Y97_21665	PF01316	Arginine repressor, DNA binding domain
C3Y97_21670	PF01479	S4 domain
C3Y97_21670	PF01728	FtsJ-like methyltransferase
C3Y97_21675	PF02779	Transketolase, pyrimidine binding domain
C3Y97_21675	PF02780	Transketolase, C-terminal domain
C3Y97_21675	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
C3Y97_21680	PF00348	Polyprenyl synthetase
C3Y97_21685	PF02609	Exonuclease VII small subunit
C3Y97_21690	PF02601	Exonuclease VII, large subunit
C3Y97_21690	PF13742	OB-fold nucleic acid binding domain
C3Y97_21695	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
C3Y97_21695	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
C3Y97_21700	PF01029	NusB family
C3Y97_21705	PF03780	Asp23 family, cell envelope-related function
C3Y97_21710	PF00289	Biotin carboxylase, N-terminal domain
C3Y97_21710	PF02785	Biotin carboxylase C-terminal domain
C3Y97_21710	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
C3Y97_21715	PF00364	Biotin-requiring enzyme
C3Y97_21725	PF12685	SpoIIIAH-like protein
C3Y97_21735	PF09581	Stage III sporulation protein AF (Spore_III_AF)
C3Y97_21740	PF09546	Stage III sporulation protein AE (spore_III_AE)
C3Y97_21745	PF06686	Stage III sporulation protein AC/AD protein family
C3Y97_21750	PF06686	Stage III sporulation protein AC/AD protein family
C3Y97_21755	PF09548	Stage III sporulation protein AB (spore_III_AB)
C3Y97_21780	PF08207	Elongation factor P (EF-P) KOW-like domain
C3Y97_21780	PF09285	Elongation factor P, C-terminal
C3Y97_21780	PF01132	Elongation factor P (EF-P) OB domain
C3Y97_21785	PF00557	Metallopeptidase family M24
C3Y97_21785	PF01321	Creatinase/Prolidase N-terminal domain
C3Y97_21790	PF01220	Dehydroquinase class II
C3Y97_21795	PF11085	Conserved membrane protein YqhR
C3Y97_21800	PF07136	Protein of unknown function (DUF1385)
C3Y97_21810	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_21815	PF02742	Iron dependent repressor, metal binding and dimerisation domain
C3Y97_21815	PF01325	Iron dependent repressor, N-terminal DNA binding domain
C3Y97_21840	PF03099	Biotin/lipoate A/B protein ligase family
C3Y97_21845	PF00581	Rhodanese-like domain
C3Y97_21855	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3Y97_21855	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_21865	PF00893	Small Multidrug Resistance protein
C3Y97_21870	PF00893	Small Multidrug Resistance protein
C3Y97_21905	PF00005	ABC transporter
C3Y97_21910	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_21925	PF02347	Glycine cleavage system P-protein
C3Y97_21930	PF02347	Glycine cleavage system P-protein
C3Y97_21935	PF02347	Glycine cleavage system P-protein
C3Y97_21940	PF01571	Aminomethyltransferase folate-binding domain
C3Y97_21940	PF08669	Glycine cleavage T-protein C-terminal barrel domain
C3Y97_21945	PF00271	Helicase conserved C-terminal domain
C3Y97_21945	PF00176	SNF2 family N-terminal domain
C3Y97_21950	PF11079	Bacterial protein YqhG of unknown function
C3Y97_21975	PF14038	YqzE-like protein
C3Y97_21980	PF01202	Shikimate kinase
C3Y97_22015	PF00482	Type II secretion system (T2SS), protein F
C3Y97_22020	PF00437	Type II/IV secretion system protein
C3Y97_22030	PF11117	Protein of unknown function (DUF2626)
C3Y97_22035	PF00375	Sodium:dicarboxylate symporter family
C3Y97_22070	PF04101	Glycosyltransferase family 28 C-terminal domain
C3Y97_22070	PF03033	Glycosyltransferase family 28 N-terminal domain
C3Y97_22075	PF02310	B12 binding domain
C3Y97_22075	PF02607	B12 binding domain
C3Y97_22075	PF02965	Vitamin B12 dependent methionine synthase, activation domain
C3Y97_22075	PF00809	Pterin binding enzyme
C3Y97_22075	PF02574	Homocysteine S-methyltransferase
C3Y97_22080	PF02574	Homocysteine S-methyltransferase
C3Y97_22080	PF02219	Methylenetetrahydrofolate reductase
C3Y97_22085	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3Y97_22090	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3Y97_22100	PF01022	Bacterial regulatory protein, arsR family
C3Y97_22110	PF00753	Metallo-beta-lactamase superfamily
C3Y97_22115	PF10958	Protein of unknown function (DUF2759)
C3Y97_22120	PF00480	ROK family
C3Y97_22125	PF06014	Bacterial protein of unknown function (DUF910)
C3Y97_22130	PF01812	5-formyltetrahydrofolate cyclo-ligase family
C3Y97_22135	PF00471	Ribosomal protein L33
C3Y97_22140	PF00483	Nucleotidyl transferase
C3Y97_22145	PF01895	PhoU domain
C3Y97_22150	PF00005	ABC transporter
C3Y97_22155	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_22160	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_22165	PF12849	PBP superfamily domain
C3Y97_22175	PF07690	Major Facilitator Superfamily
C3Y97_22180	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3Y97_22180	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3Y97_22190	PF06691	Protein of unknown function (DUF1189)
C3Y97_22200	PF04551	GcpE protein
C3Y97_22205	PF01475	Ferric uptake regulator family
C3Y97_22210	PF00950	ABC 3 transport family
C3Y97_22215	PF00005	ABC transporter
C3Y97_22220	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_22220	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_22225	PF11116	Protein of unknown function (DUF2624)
C3Y97_22230	PF01261	Xylose isomerase-like TIM barrel
C3Y97_22235	PF00271	Helicase conserved C-terminal domain
C3Y97_22235	PF00270	DEAD/DEAH box helicase
C3Y97_22245	PF02401	LytB protein
C3Y97_22250	PF01784	NIF3 (NGG1p interacting factor 3)
C3Y97_22255	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
C3Y97_22260	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3Y97_22265	PF04545	Sigma-70, region 4
C3Y97_22265	PF03979	Sigma-70 factor, region 1.1
C3Y97_22265	PF00140	Sigma-70 factor, region 1.2
C3Y97_22265	PF04539	Sigma-70 region 3
C3Y97_22265	PF04542	Sigma-70 region 2 
C3Y97_22270	PF10410	DnaB-helicase binding domain of primase
C3Y97_22270	PF08275	DNA primase catalytic core, N-terminal domain
C3Y97_22270	PF01807	CHC2 zinc finger
C3Y97_22285	PF03618	Kinase/pyrophosphorylase
C3Y97_22290	PF00571	CBS domain
C3Y97_22290	PF08279	HTH domain
C3Y97_22295	PF02565	Recombination protein O C terminal
C3Y97_22295	PF11967	Recombination protein O N terminal
C3Y97_22305	PF07650	KH domain
C3Y97_22305	PF01926	50S ribosome-binding GTPase
C3Y97_22310	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3Y97_22315	PF01219	Prokaryotic diacylglycerol kinase
C3Y97_22320	PF02130	Uncharacterized protein family UPF0054
C3Y97_22325	PF07697	7TM-HD extracellular
C3Y97_22325	PF01966	HD domain
C3Y97_22325	PF07698	7TM receptor with intracellular HD hydrolase
C3Y97_22330	PF02562	PhoH-like protein
C3Y97_22335	PF06898	Putative stage IV sporulation protein YqfD
C3Y97_22340	PF07873	YabP family
C3Y97_22350	PF09424	Yqey-like protein
C3Y97_22355	PF01165	Ribosomal protein S21
C3Y97_22365	PF00919	Uncharacterized protein family UPF0004
C3Y97_22365	PF04055	Radical SAM superfamily
C3Y97_22365	PF01938	TRAM domain
C3Y97_22370	PF04452	RNA methyltransferase
C3Y97_22380	PF00684	DnaJ central domain
C3Y97_22380	PF01556	DnaJ C terminal domain
C3Y97_22380	PF00226	DnaJ domain
C3Y97_22385	PF00012	Hsp70 protein
C3Y97_22390	PF01025	GrpE
C3Y97_22395	PF01628	HrcA protein C terminal domain
C3Y97_22400	PF04055	Radical SAM superfamily
C3Y97_22400	PF06969	HemN C-terminal domain
C3Y97_22405	PF01638	HxlR-like helix-turn-helix
C3Y97_22410	PF03144	Elongation factor Tu domain 2
C3Y97_22410	PF06421	GTP-binding protein LepA C-terminus
C3Y97_22410	PF00009	Elongation factor Tu GTP binding domain
C3Y97_22410	PF00679	Elongation factor G C-terminus
C3Y97_22420	PF03418	Germination protease
C3Y97_22425	PF01649	Ribosomal protein S20
C3Y97_22430	PF06144	DNA polymerase III, delta subunit
C3Y97_22435	PF14141	YqzM-like protein
C3Y97_22440	PF00753	Metallo-beta-lactamase superfamily
C3Y97_22440	PF13567	Domain of unknown function (DUF4131)
C3Y97_22440	PF03772	Competence protein
C3Y97_22445	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
C3Y97_22450	PF10531	SLBB domain
C3Y97_22455	PF03807	NADP oxidoreductase coenzyme F420-dependent
C3Y97_22455	PF14748	Pyrroline-5-carboxylate reductase dimerisation
C3Y97_22460	PF13649	Methyltransferase domain
C3Y97_22470	PF01966	HD domain
C3Y97_22475	PF01467	Cytidylyltransferase-like
C3Y97_22480	PF01985	CRS1 / YhbY (CRM) domain
C3Y97_22485	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
C3Y97_22485	PF08501	Shikimate dehydrogenase substrate binding domain
C3Y97_22485	PF01488	Shikimate / quinate 5-dehydrogenase
C3Y97_22490	PF01926	50S ribosome-binding GTPase
C3Y97_22505	PF02666	Phosphatidylserine decarboxylase
C3Y97_22510	PF04542	Sigma-70 region 2 
C3Y97_22510	PF04545	Sigma-70, region 4
C3Y97_22525	PF00471	Ribosomal protein L33
C3Y97_22530	PF00881	Nitroreductase family
C3Y97_22535	PF04607	Region found in RelA / SpoT proteins
C3Y97_22545	PF00245	Alkaline phosphatase
C3Y97_22550	PF00583	Acetyltransferase (GNAT) family
C3Y97_22555	PF08386	TAP-like protein
C3Y97_22555	PF00561	alpha/beta hydrolase fold
C3Y97_22590	PF00082	Subtilase family
C3Y97_22590	PF05922	Peptidase inhibitor I9
C3Y97_22590	PF13860	FlgD Ig-like domain
C3Y97_22590	PF02225	PA domain
C3Y97_22595	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
C3Y97_22605	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
C3Y97_22610	PF07681	DoxX
C3Y97_22645	PF00005	ABC transporter
C3Y97_22650	PF01032	FecCD transport family
C3Y97_22655	PF01497	Periplasmic binding protein
C3Y97_22665	PF14143	YrhC-like protein
C3Y97_22670	PF00171	Aldehyde dehydrogenase family
C3Y97_22670	PF00465	Iron-containing alcohol dehydrogenase 
C3Y97_22675	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3Y97_22680	PF00291	Pyridoxal-phosphate dependent enzyme
C3Y97_22685	PF01048	Phosphorylase superfamily
C3Y97_22690	PF08241	Methyltransferase domain
C3Y97_22705	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_22705	PF03717	Penicillin-binding Protein dimerisation domain
C3Y97_22715	PF03449	Transcription elongation factor, N-terminal
C3Y97_22715	PF01272	Transcription elongation factor, GreA/GreB, C-term
C3Y97_22720	PF00485	Phosphoribulokinase / Uridine kinase family
C3Y97_22740	PF02618	YceG-like family
C3Y97_22745	PF06949	Protein of unknown function (DUF1292)
C3Y97_22750	PF03652	Holliday junction resolvase
C3Y97_22755	PF06135	IreB regulatory phosphoprotein
C3Y97_22760	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3Y97_22760	PF02272	DHHA1 domain
C3Y97_22760	PF01411	tRNA synthetases class II (A)
C3Y97_22770	PF01594	AI-2E family transporter
C3Y97_22790	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
C3Y97_22790	PF14490	Helix-hairpin-helix containing domain
C3Y97_22790	PF13538	UvrD-like helicase C-terminal domain
C3Y97_22805	PF00266	Aminotransferase class-V
C3Y97_22810	PF02082	Transcriptional regulator
C3Y97_22815	PF12002	MgsA AAA+ ATPase C terminal
C3Y97_22815	PF05496	Holliday junction DNA helicase RuvB P-loop domain
C3Y97_22815	PF16193	AAA C-terminal domain
C3Y97_22830	PF00899	ThiF family
C3Y97_22835	PF02938	GAD domain
C3Y97_22835	PF01336	OB-fold nucleic acid binding domain
C3Y97_22835	PF00152	tRNA synthetases class II (D, K and N) 
C3Y97_22840	PF03129	Anticodon binding domain
C3Y97_22840	PF13393	Histidyl-tRNA synthetase
C3Y97_22850	PF02580	D-Tyr-tRNA(Tyr) deacylase
C3Y97_22855	PF13291	ACT domain
C3Y97_22855	PF02824	TGS domain
C3Y97_22855	PF04607	Region found in RelA / SpoT proteins
C3Y97_22860	PF00156	Phosphoribosyl transferase domain
C3Y97_22865	PF17768	RecJ OB domain
C3Y97_22865	PF02272	DHHA1 domain
C3Y97_22865	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
C3Y97_22865	PF01368	DHH family
C3Y97_22870	PF16916	Dimerisation domain of Zinc Transporter
C3Y97_22870	PF01545	Cation efflux family
C3Y97_22875	PF02355	Protein export membrane protein
C3Y97_22875	PF07549	SecD/SecF GG Motif
C3Y97_22880	PF13797	Post-transcriptional regulator
C3Y97_22885	PF01943	Polysaccharide biosynthesis protein
C3Y97_22885	PF14667	Polysaccharide biosynthesis C-terminal domain
C3Y97_22890	PF04239	Protein of unknown function (DUF421)
C3Y97_22900	PF02699	Preprotein translocase subunit
C3Y97_22905	PF01702	Queuine tRNA-ribosyltransferase
C3Y97_22910	PF02547	Queuosine biosynthesis protein
C3Y97_22915	PF11146	Protein of unknown function (DUF2905)
C3Y97_22920	PF05491	RuvB C-terminal winged helix domain
C3Y97_22920	PF17864	RuvB AAA lid domain
C3Y97_22920	PF05496	Holliday junction DNA helicase RuvB P-loop domain
C3Y97_22925	PF01330	RuvA N terminal domain
C3Y97_22925	PF07499	RuvA, C-terminal domain
C3Y97_22930	PF01497	Periplasmic binding protein
C3Y97_22950	PF01476	LysM domain
C3Y97_22955	PF02445	Quinolinate synthetase A protein
C3Y97_22960	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
C3Y97_22960	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
C3Y97_22965	PF02910	Fumarate reductase flavoprotein C-term
C3Y97_22965	PF00890	FAD binding domain
C3Y97_22970	PF00266	Aminotransferase class-V
C3Y97_22975	PF02829	3H domain
C3Y97_22975	PF08279	HTH domain
C3Y97_22980	PF03473	MOSC domain
C3Y97_22980	PF03475	3-alpha domain
C3Y97_22985	PF01842	ACT domain
C3Y97_22985	PF00800	Prephenate dehydratase
C3Y97_22990	PF02687	FtsX-like permease family
C3Y97_22995	PF02687	FtsX-like permease family
C3Y97_23000	PF00005	ABC transporter
C3Y97_23005	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_23010	PF00072	Response regulator receiver domain
C3Y97_23010	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_23015	PF09269	Domain of unknown function (DUF1967)
C3Y97_23015	PF01926	50S ribosome-binding GTPase
C3Y97_23015	PF01018	GTP1/OBG
C3Y97_23020	PF14682	Sporulation initiation phospho-transferase B, C-terminal
C3Y97_23020	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
C3Y97_23025	PF01016	Ribosomal L27 protein
C3Y97_23030	PF04327	Cysteine protease Prp
C3Y97_23035	PF00829	Ribosomal prokaryotic L21 protein
C3Y97_23040	PF00575	S1 RNA binding domain
C3Y97_23040	PF10150	Ribonuclease E/G family
C3Y97_23045	PF02163	Peptidase family M50
C3Y97_23050	PF01551	Peptidase family M23
C3Y97_23055	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
C3Y97_23060	PF03775	Septum formation inhibitor MinC, C-terminal domain
C3Y97_23070	PF04085	rod shape-determining protein MreC
C3Y97_23080	PF04002	RadC-like JAB domain
C3Y97_23085	PF02545	Maf-like protein
C3Y97_23095	PF02875	Mur ligase family, glutamate ligase domain
C3Y97_23095	PF08245	Mur ligase middle domain
C3Y97_23100	PF08264	Anticodon-binding domain of tRNA
C3Y97_23100	PF00133	tRNA synthetases class I (I, L, M and V)
C3Y97_23100	PF10458	Valyl tRNA synthetase tRNA binding arm
C3Y97_23110	PF01476	LysM domain
C3Y97_23115	PF00202	Aminotransferase class-III
C3Y97_23120	PF00490	Delta-aminolevulinic acid dehydratase
C3Y97_23125	PF02602	Uroporphyrinogen-III synthase HemD
C3Y97_23130	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
C3Y97_23130	PF03900	Porphobilinogen deaminase, C-terminal domain
C3Y97_23135	PF01578	Cytochrome C assembly protein
C3Y97_23140	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
C3Y97_23140	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
C3Y97_23140	PF01488	Shikimate / quinate 5-dehydrogenase
C3Y97_23145	PF01047	MarR family
C3Y97_23150	PF02566	OsmC-like protein
C3Y97_23155	PF01926	50S ribosome-binding GTPase
C3Y97_23160	PF05362	Lon protease (S16) C-terminal proteolytic domain
C3Y97_23160	PF00004	ATPase family associated with various cellular activities (AAA)
C3Y97_23160	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
C3Y97_23165	PF00004	ATPase family associated with various cellular activities (AAA)
C3Y97_23165	PF05362	Lon protease (S16) C-terminal proteolytic domain
C3Y97_23170	PF07724	AAA domain (Cdc48 subfamily)
C3Y97_23170	PF06689	ClpX C4-type zinc finger
C3Y97_23170	PF10431	C-terminal, D2-small domain, of ClpB protein 
C3Y97_23175	PF05698	Bacterial trigger factor protein (TF) C-terminus
C3Y97_23175	PF05697	Bacterial trigger factor protein (TF)
C3Y97_23175	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
C3Y97_23195	PF11724	YvbH-like oligomerisation region
C3Y97_23195	PF08000	Bacterial PH domain
C3Y97_23245	PF02796	Helix-turn-helix domain of resolvase
C3Y97_23245	PF00239	Resolvase, N terminal domain
C3Y97_23275	PF00589	Phage integrase family
C3Y97_23275	PF02899	Phage integrase, N-terminal SAM-like domain
C3Y97_23295	PF12850	Calcineurin-like phosphoesterase superfamily domain
C3Y97_23300	PF01725	Ham1 family
C3Y97_23305	PF03725	3' exoribonuclease family, domain 2
C3Y97_23305	PF01138	3' exoribonuclease family, domain 1
C3Y97_23310	PF10646	Sporulation and spore germination
C3Y97_23315	PF01177	Asp/Glu/Hydantoin racemase
C3Y97_23320	PF07690	Major Facilitator Superfamily
C3Y97_23330	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_23340	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_23345	PF00860	Permease family
C3Y97_23350	PF07969	Amidohydrolase family
C3Y97_23355	PF04024	PspC domain
C3Y97_23360	PF07883	Cupin domain
C3Y97_23360	PF01381	Helix-turn-helix
C3Y97_23365	PF13536	Putative multidrug resistance efflux transporter
C3Y97_23370	PF00230	Major intrinsic protein
C3Y97_23375	PF02082	Transcriptional regulator
C3Y97_23385	PF13732	Domain of unknown function (DUF4162)
C3Y97_23385	PF00005	ABC transporter
C3Y97_23390	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
C3Y97_23395	PF00691	OmpA family
C3Y97_23395	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
C3Y97_23400	PF01618	MotA/TolQ/ExbB proton channel family
C3Y97_23410	PF02557	D-alanyl-D-alanine carboxypeptidase
C3Y97_23415	PF03061	Thioesterase superfamily
C3Y97_23420	PF13085	2Fe-2S iron-sulfur cluster binding domain
C3Y97_23420	PF13183	4Fe-4S dicluster domain
C3Y97_23425	PF02910	Fumarate reductase flavoprotein C-term
C3Y97_23425	PF00890	FAD binding domain
C3Y97_23430	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
C3Y97_23435	PF10702	Protein of unknown function (DUF2507)
C3Y97_23440	PF08459	UvrC Helix-hairpin-helix N-terminal
C3Y97_23440	PF01541	GIY-YIG catalytic domain
C3Y97_23440	PF02151	UvrB/uvrC motif
C3Y97_23445	PF00085	Thioredoxin
C3Y97_23450	PF00766	Electron transfer flavoprotein FAD-binding domain
C3Y97_23450	PF01012	Electron transfer flavoprotein domain
C3Y97_23455	PF01012	Electron transfer flavoprotein domain
C3Y97_23460	PF00378	Enoyl-CoA hydratase/isomerase
C3Y97_23465	PF08359	YsiA-like protein, C-terminal region
C3Y97_23465	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_23470	PF00501	AMP-binding enzyme
C3Y97_23470	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_23480	PF01497	Periplasmic binding protein
C3Y97_23485	PF01032	FecCD transport family
C3Y97_23495	PF05163	DinB family
C3Y97_23525	PF00005	ABC transporter
C3Y97_23530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_23530	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_23535	PF00072	Response regulator receiver domain
C3Y97_23535	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_23545	PF09962	Uncharacterized conserved protein (DUF2196)
C3Y97_23550	PF10672	S-adenosylmethionine-dependent methyltransferase
C3Y97_23550	PF17785	PUA-like domain
C3Y97_23560	PF03992	Antibiotic biosynthesis monooxygenase
C3Y97_23565	PF04203	Sortase domain
C3Y97_23570	PF00005	ABC transporter
C3Y97_23575	PF01032	FecCD transport family
C3Y97_23580	PF01497	Periplasmic binding protein
C3Y97_23585	PF05031	Iron Transport-associated domain 
C3Y97_23595	PF05031	Iron Transport-associated domain 
C3Y97_23600	PF05525	Branched-chain amino acid transport protein
C3Y97_23605	PF00849	RNA pseudouridylate synthase
C3Y97_23605	PF01479	S4 domain
C3Y97_23615	PF00488	MutS domain V
C3Y97_23615	PF01713	Smr domain
C3Y97_23620	PF02811	PHP domain
C3Y97_23620	PF14716	Helix-hairpin-helix domain
C3Y97_23620	PF14791	DNA polymerase beta thumb 
C3Y97_23625	PF02674	Colicin V production protein
C3Y97_23630	PF05164	Cell division protein ZapA
C3Y97_23635	PF11858	Domain of unknown function (DUF3378)
C3Y97_23635	PF01351	Ribonuclease HII
C3Y97_23655	PF00152	tRNA synthetases class II (D, K and N) 
C3Y97_23655	PF01336	OB-fold nucleic acid binding domain
C3Y97_23660	PF03483	B3/4 domain
C3Y97_23660	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
C3Y97_23660	PF03147	Ferredoxin-fold anticodon binding domain
C3Y97_23660	PF03484	tRNA synthetase B5 domain
C3Y97_23660	PF01588	Putative tRNA binding domain
C3Y97_23665	PF01409	tRNA synthetases class II core domain (F)
C3Y97_23665	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
C3Y97_23670	PF08032	RNA 2'-O ribose methyltransferase substrate binding
C3Y97_23670	PF00588	SpoU rRNA Methylase family
C3Y97_23675	PF14098	Small, acid-soluble spore protein I
C3Y97_23680	PF01966	HD domain
C3Y97_23700	PF07690	Major Facilitator Superfamily
C3Y97_23710	PF16859	Tetracyclin repressor-like, C-terminal domain
C3Y97_23710	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_23715	PF05343	M42 glutamyl aminopeptidase
C3Y97_23725	PF00453	Ribosomal protein L20
C3Y97_23730	PF01632	Ribosomal protein L35
C3Y97_23735	PF05198	Translation initiation factor IF-3, N-terminal domain
C3Y97_23735	PF00707	Translation initiation factor IF-3, C-terminal domain
C3Y97_23740	PF02824	TGS domain
C3Y97_23740	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3Y97_23740	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
C3Y97_23740	PF03129	Anticodon binding domain
C3Y97_23745	PF08812	YtxC-like family
C3Y97_23750	PF13783	Domain of unknown function (DUF4177)
C3Y97_23755	PF07319	Primosomal protein DnaI N-terminus
C3Y97_23755	PF01695	IstB-like ATP binding protein
C3Y97_23760	PF07261	Replication initiation and membrane attachment
C3Y97_23765	PF03477	ATP cone domain
C3Y97_23770	PF02675	S-adenosylmethionine decarboxylase 
C3Y97_23780	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C3Y97_23780	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
C3Y97_23785	PF01121	Dephospho-CoA kinase
C3Y97_23790	PF02659	Putative manganese efflux pump
C3Y97_23795	PF06827	Zinc finger found in FPG and IleRS
C3Y97_23795	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
C3Y97_23795	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
C3Y97_23800	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
C3Y97_23800	PF00476	DNA polymerase family A
C3Y97_23800	PF01367	5'-3' exonuclease, C-terminal SAM fold
C3Y97_23805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_23805	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_23805	PF16736	Single Cache-like 
C3Y97_23805	PF00989	PAS fold
C3Y97_23810	PF00072	Response regulator receiver domain
C3Y97_23810	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_23830	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3Y97_23830	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3Y97_23835	PF00180	Isocitrate/isopropylmalate dehydrogenase
C3Y97_23840	PF00285	Citrate synthase, C-terminal domain
C3Y97_23850	PF04284	Protein of unknown function (DUF441)
C3Y97_23855	PF01594	AI-2E family transporter
C3Y97_23860	PF04186	FxsA cytoplasmic membrane protein 
C3Y97_23865	PF02887	Pyruvate kinase, alpha/beta domain
C3Y97_23865	PF00391	PEP-utilising enzyme, mobile domain
C3Y97_23865	PF00224	Pyruvate kinase, barrel domain
C3Y97_23870	PF00365	Phosphofructokinase
C3Y97_23875	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
C3Y97_23880	PF01039	Carboxyl transferase domain
C3Y97_23880	PF17848	Acetyl-coA carboxylase zinc finger domain
C3Y97_23885	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_23890	PF00390	Malic enzyme, N-terminal domain
C3Y97_23890	PF03949	Malic enzyme, NAD binding domain
C3Y97_23895	PF07733	Bacterial DNA polymerase III alpha NTPase domain
C3Y97_23895	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
C3Y97_23895	PF14579	Helix-hairpin-helix motif
C3Y97_23895	PF02811	PHP domain
C3Y97_23895	PF01336	OB-fold nucleic acid binding domain
C3Y97_23900	PF14034	Sporulation protein YtrH
C3Y97_23910	PF01368	DHH family
C3Y97_23910	PF02272	DHHA1 domain
C3Y97_23915	PF14007	YtpI-like protein
C3Y97_23925	PF00571	CBS domain
C3Y97_23925	PF03061	Thioesterase superfamily
C3Y97_23925	PF07085	DRTGG domain
C3Y97_23925	PF00392	Bacterial regulatory proteins, gntR family
C3Y97_23940	PF00557	Metallopeptidase family M24
C3Y97_23940	PF01321	Creatinase/Prolidase N-terminal domain
C3Y97_23980	PF12746	GNAT acetyltransferase
C3Y97_23985	PF07883	Cupin domain
C3Y97_23995	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
C3Y97_23995	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
C3Y97_24005	PF00582	Universal stress protein family
C3Y97_24025	PF14698	Argininosuccinate lyase C-terminal
C3Y97_24025	PF00206	Lyase
C3Y97_24030	PF00764	Arginosuccinate synthase
C3Y97_24055	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_24055	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_24060	PF12787	EcsC protein family
C3Y97_24075	PF00871	Acetokinase family
C3Y97_24080	PF02384	N-6 DNA Methylase
C3Y97_24085	PF08534	Redoxin
C3Y97_24090	PF09579	Sporulation protein YtfJ (Spore_YtfJ)
C3Y97_24100	PF01513	ATP-NAD kinase
C3Y97_24105	PF07969	Amidohydrolase family
C3Y97_24115	PF00501	AMP-binding enzyme
C3Y97_24115	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_24120	PF00269	Small, acid-soluble spore proteins, alpha/beta type
C3Y97_24125	PF02926	THUMP domain
C3Y97_24125	PF02568	Thiamine biosynthesis protein (ThiI)
C3Y97_24130	PF00266	Aminotransferase class-V
C3Y97_24135	PF06160	Septation ring formation regulator, EzrA 
C3Y97_24140	PF03466	LysR substrate binding domain
C3Y97_24140	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_24145	PF00892	EamA-like transporter family
C3Y97_24150	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_24155	PF13185	GAF domain
C3Y97_24160	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3Y97_24170	PF00163	Ribosomal protein S4/S9 N-terminal domain
C3Y97_24170	PF01479	S4 domain
C3Y97_24185	PF00579	tRNA synthetases class I (W and Y)
C3Y97_24185	PF01479	S4 domain
C3Y97_24195	PF04542	Sigma-70 region 2 
C3Y97_24195	PF08281	Sigma-70, region 4
C3Y97_24205	PF14602	Hexapeptide repeat of succinyl-transferase
C3Y97_24205	PF12464	Maltose acetyltransferase 
C3Y97_24210	PF00501	AMP-binding enzyme
C3Y97_24210	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_24215	PF00583	Acetyltransferase (GNAT) family
C3Y97_24220	PF00571	CBS domain
C3Y97_24225	PF00850	Histone deacetylase domain
C3Y97_24240	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_24240	PF00072	Response regulator receiver domain
C3Y97_24245	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_24245	PF13426	PAS domain
C3Y97_24245	PF00672	HAMP domain
C3Y97_24245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_24250	PF12796	Ankyrin repeats (3 copies)
C3Y97_24255	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
C3Y97_24260	PF01741	Large-conductance mechanosensitive channel, MscL
C3Y97_24285	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_24295	PF01817	Chorismate mutase type II
C3Y97_24295	PF00793	DAHP synthetase I family
C3Y97_24300	PF07537	CamS sex pheromone cAM373 precursor
C3Y97_24305	PF11009	Protein of unknown function (DUF2847)
C3Y97_24315	PF02073	Thermophilic metalloprotease (M29)
C3Y97_24340	PF13302	Acetyltransferase (GNAT) domain
C3Y97_24345	PF02875	Mur ligase family, glutamate ligase domain
C3Y97_24345	PF08245	Mur ligase middle domain
C3Y97_24345	PF01225	Mur ligase family, catalytic domain
C3Y97_24355	PF09397	Ftsk gamma domain
C3Y97_24355	PF01580	FtsK/SpoIIIE family
C3Y97_24355	PF17854	FtsK alpha domain
C3Y97_24360	PF01476	LysM domain
C3Y97_24360	PF01520	N-acetylmuramoyl-L-alanine amidase
C3Y97_24370	PF01588	Putative tRNA binding domain
C3Y97_24370	PF14794	Domain of unknown function (DUF4479)
C3Y97_24375	PF07285	Protein of unknown function (DUF1444)
C3Y97_24380	PF00085	Thioredoxin
C3Y97_24385	PF01931	Protein of unknown function DUF84
C3Y97_24390	PF05343	M42 glutamyl aminopeptidase
C3Y97_24400	PF00753	Metallo-beta-lactamase superfamily
C3Y97_24405	PF02390	Putative methyltransferase 
C3Y97_24410	PF14165	YtzH-like protein
C3Y97_24415	PF01636	Phosphotransferase enzyme family
C3Y97_24420	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3Y97_24420	PF00128	Alpha amylase, catalytic domain
C3Y97_24420	PF17999	Pullulanase N1-terminal domain
C3Y97_24425	PF02834	LigT like Phosphoesterase
C3Y97_24430	PF01546	Peptidase family M20/M25/M40
C3Y97_24435	PF08220	DeoR-like helix-turn-helix domain
C3Y97_24440	PF00849	RNA pseudouridylate synthase
C3Y97_24440	PF01479	S4 domain
C3Y97_24445	PF14667	Polysaccharide biosynthesis C-terminal domain
C3Y97_24445	PF01943	Polysaccharide biosynthesis protein
C3Y97_24455	PF07690	Major Facilitator Superfamily
C3Y97_24460	PF01022	Bacterial regulatory protein, arsR family
C3Y97_24465	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
C3Y97_24480	PF10957	Sporulation protein Cse60 
C3Y97_24490	PF02559	CarD-like/TRCF domain
C3Y97_24500	PF06800	Sugar transport protein
C3Y97_24515	PF02391	MoaE protein
C3Y97_24520	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
C3Y97_24525	PF00994	Probable molybdopterin binding domain
C3Y97_24525	PF03454	MoeA C-terminal region (domain IV)
C3Y97_24525	PF03453	MoeA N-terminal region (domain I and II)
C3Y97_24530	PF01967	MoaC family
C3Y97_24535	PF00899	ThiF family
C3Y97_24540	PF04055	Radical SAM superfamily
C3Y97_24540	PF06463	Molybdenum Cofactor Synthesis C
C3Y97_24565	PF00581	Rhodanese-like domain
C3Y97_24575	PF00561	alpha/beta hydrolase fold
C3Y97_24580	PF03323	Bacillus/Clostridium GerA spore germination protein
C3Y97_24585	PF03845	Spore germination protein
C3Y97_24610	PF08264	Anticodon-binding domain of tRNA
C3Y97_24610	PF00133	tRNA synthetases class I (I, L, M and V)
C3Y97_24610	PF13603	Leucyl-tRNA synthetase, Domain 2
C3Y97_24610	PF09334	tRNA synthetases class I (M)
C3Y97_24615	PF07690	Major Facilitator Superfamily
C3Y97_24625	PF02080	TrkA-C domain
C3Y97_24630	PF00589	Phage integrase family
C3Y97_24640	PF00005	ABC transporter
C3Y97_24645	PF04235	Protein of unknown function (DUF418)
C3Y97_24645	PF07786	Protein of unknown function (DUF1624)
C3Y97_24655	PF10732	Protein of unknown function (DUF2524)
C3Y97_24660	PF16199	Radical_SAM C-terminal domain
C3Y97_24660	PF04055	Radical SAM superfamily
C3Y97_24665	PF06962	Putative rRNA methylase
C3Y97_24670	PF01177	Asp/Glu/Hydantoin racemase
C3Y97_24690	PF10776	Protein of unknown function (DUF2600)
C3Y97_24695	PF12146	Serine aminopeptidase, S33
C3Y97_24700	PF00132	Bacterial transferase hexapeptide (six repeats)
C3Y97_24705	PF01569	PAP2 superfamily
C3Y97_24710	PF13439	Glycosyltransferase Family 4
C3Y97_24710	PF00534	Glycosyl transferases group 1
C3Y97_24715	PF12804	MobA-like NTP transferase domain
C3Y97_24720	PF00994	Probable molybdopterin binding domain
C3Y97_24730	PF13302	Acetyltransferase (GNAT) domain
C3Y97_24735	PF02773	S-adenosylmethionine synthetase, C-terminal domain
C3Y97_24735	PF00438	S-adenosylmethionine synthetase, N-terminal domain
C3Y97_24735	PF02772	S-adenosylmethionine synthetase, central domain
C3Y97_24745	PF01293	Phosphoenolpyruvate carboxykinase
C3Y97_24790	PF13426	PAS domain
C3Y97_24790	PF13188	PAS domain
C3Y97_24790	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_24790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_24790	PF00989	PAS fold
C3Y97_24795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_24795	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_24795	PF02743	Cache domain
C3Y97_24810	PF08386	TAP-like protein
C3Y97_24810	PF00561	alpha/beta hydrolase fold
C3Y97_24815	PF00884	Sulfatase
C3Y97_24835	PF00005	ABC transporter
C3Y97_24840	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_24855	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_24865	PF00293	NUDIX domain
C3Y97_24895	PF02664	S-Ribosylhomocysteinase (LuxS)
C3Y97_24900	PF01809	Putative membrane protein insertion efficiency factor
C3Y97_24905	PF00484	Carbonic anhydrase
C3Y97_24910	PF01654	Cytochrome bd terminal oxidase subunit I
C3Y97_24915	PF02322	Cytochrome bd terminal oxidase subunit II
C3Y97_24920	PF10676	Spore germination protein gerPA/gerPF
C3Y97_24930	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_24930	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_24955	PF04012	PspA/IM30 family
C3Y97_24970	PF07670	Nucleoside recognition
C3Y97_24970	PF02421	Ferrous iron transport protein B
C3Y97_24970	PF17910	FeoB cytosolic helical domain
C3Y97_24970	PF07664	Ferrous iron transport protein B C terminus
C3Y97_24980	PF09515	Thiamine transporter protein (Thia_YuaJ)
C3Y97_24985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_24985	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_24985	PF00672	HAMP domain
C3Y97_24990	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_24990	PF00072	Response regulator receiver domain
C3Y97_25020	PF00781	Diacylglycerol kinase catalytic domain
C3Y97_25040	PF02687	FtsX-like permease family
C3Y97_25045	PF00005	ABC transporter
C3Y97_25060	PF09335	SNARE associated Golgi protein
C3Y97_25065	PF00398	Ribosomal RNA adenine dimethylase
C3Y97_25070	PF02687	FtsX-like permease family
C3Y97_25075	PF00005	ABC transporter
C3Y97_25080	PF12833	Helix-turn-helix domain
C3Y97_25080	PF06445	GyrI-like small molecule binding domain
C3Y97_25090	PF07853	Protein of unknown function (DUF1648)
C3Y97_25090	PF13630	SdpI/YhfL protein family
C3Y97_25095	PF01022	Bacterial regulatory protein, arsR family
C3Y97_25100	PF00072	Response regulator receiver domain
C3Y97_25100	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_25105	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_25110	PF02687	FtsX-like permease family
C3Y97_25115	PF02687	FtsX-like permease family
C3Y97_25120	PF00005	ABC transporter
C3Y97_25125	PF02687	FtsX-like permease family
C3Y97_25135	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_25135	PF13977	BetI-type transcriptional repressor, C-terminal
C3Y97_25145	PF02447	GntP family permease
C3Y97_25160	PF07071	KDGP aldolase
C3Y97_25165	PF03841	L-seryl-tRNA selenium transferase
C3Y97_25170	PF01979	Amidohydrolase family
C3Y97_25185	PF02557	D-alanyl-D-alanine carboxypeptidase
C3Y97_25190	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_25190	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_25195	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_25195	PF00072	Response regulator receiver domain
C3Y97_25205	PF13378	Enolase C-terminal domain-like
C3Y97_25205	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
C3Y97_25210	PF00501	AMP-binding enzyme
C3Y97_25210	PF13193	AMP-binding enzyme C-terminal domain
C3Y97_25215	PF00378	Enoyl-CoA hydratase/isomerase
C3Y97_25220	PF00561	alpha/beta hydrolase fold
C3Y97_25225	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
C3Y97_25225	PF16582	Middle domain of thiamine pyrophosphate
C3Y97_25225	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
C3Y97_25230	PF00425	chorismate binding enzyme
C3Y97_25235	PF01040	UbiA prenyltransferase family
C3Y97_25240	PF01258	Prokaryotic dksA/traR C4-type zinc finger
C3Y97_25245	PF00313	'Cold-shock' DNA-binding domain
C3Y97_25275	PF00343	Carbohydrate phosphorylase
C3Y97_25280	PF08323	Starch synthase catalytic domain
C3Y97_25280	PF00534	Glycosyl transferases group 1
C3Y97_25285	PF00483	Nucleotidyl transferase
C3Y97_25290	PF00483	Nucleotidyl transferase
C3Y97_25295	PF02806	Alpha amylase, C-terminal all-beta domain
C3Y97_25295	PF00128	Alpha amylase, catalytic domain
C3Y97_25295	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
C3Y97_25305	PF00082	Subtilase family
C3Y97_25305	PF02225	PA domain
C3Y97_25305	PF05922	Peptidase inhibitor I9
C3Y97_25305	PF13860	FlgD Ig-like domain
C3Y97_25315	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3Y97_25315	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3Y97_25410	PF05698	Bacterial trigger factor protein (TF) C-terminus
C3Y97_25410	PF05697	Bacterial trigger factor protein (TF)
C3Y97_25450	PF02308	MgtC family
C3Y97_25455	PF07885	Ion channel
C3Y97_25455	PF02254	TrkA-N domain
C3Y97_25460	PF08868	YugN-like family
C3Y97_25465	PF00342	Phosphoglucose isomerase
C3Y97_25475	PF04070	Domain of unknown function (DUF378)
C3Y97_25480	PF00575	S1 RNA binding domain
C3Y97_25485	PF00155	Aminotransferase class I and II
C3Y97_25490	PF01037	Lrp/AsnC ligand binding domain
C3Y97_25495	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
C3Y97_25495	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
C3Y97_25500	PF08386	TAP-like protein
C3Y97_25500	PF00561	alpha/beta hydrolase fold
C3Y97_25510	PF00155	Aminotransferase class I and II
C3Y97_25520	PF08810	Kinase associated protein B
C3Y97_25525	PF00929	Exonuclease
C3Y97_25530	PF03600	Citrate transporter
C3Y97_25550	PF03129	Anticodon binding domain
C3Y97_25550	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
C3Y97_25555	PF03061	Thioesterase superfamily
C3Y97_25565	PF02632	BioY family
C3Y97_25570	PF00483	Nucleotidyl transferase
C3Y97_25575	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
C3Y97_25575	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
C3Y97_25575	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
C3Y97_25575	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
C3Y97_25580	PF10372	Bacterial membrane-spanning protein N-terminus
C3Y97_25580	PF02457	DisA bacterial checkpoint controller nucleotide-binding
C3Y97_25595	PF00892	EamA-like transporter family
C3Y97_25600	PF01040	UbiA prenyltransferase family
C3Y97_25605	PF02789	Cytosol aminopeptidase family, N-terminal domain
C3Y97_25605	PF00883	Cytosol aminopeptidase family, catalytic domain
C3Y97_25620	PF00892	EamA-like transporter family
C3Y97_25625	PF01040	UbiA prenyltransferase family
C3Y97_25630	PF06725	3D domain
C3Y97_25640	PF00293	NUDIX domain
C3Y97_25640	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_25645	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_25650	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_25660	PF06445	GyrI-like small molecule binding domain
C3Y97_25675	PF04463	Protein of unknown function (DUF523)
C3Y97_25695	PF01521	Iron-sulphur cluster biosynthesis
C3Y97_25700	PF01678	Diaminopimelate epimerase
C3Y97_25705	PF07293	Protein of unknown function (DUF1450)
C3Y97_25710	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_25720	PF00664	ABC transporter transmembrane region
C3Y97_25720	PF00005	ABC transporter
C3Y97_25720	PF03412	Peptidase C39 family
C3Y97_25725	PF03649	Uncharacterised protein family (UPF0014)
C3Y97_25730	PF03831	PhnA domain
C3Y97_25730	PF08274	PhnA Zinc-Ribbon 
C3Y97_25755	PF07315	Protein of unknown function (DUF1462)
C3Y97_25760	PF01106	NifU-like domain
C3Y97_25775	PF04608	Phosphatidylglycerophosphatase A
C3Y97_25795	PF11202	Phosphoribosyl transferase (PRTase)
C3Y97_25795	PF15608	PELOTA RNA binding domain
C3Y97_25805	PF02525	Flavodoxin-like fold
C3Y97_25810	PF13344	Haloacid dehalogenase-like hydrolase
C3Y97_25820	PF01934	Protein of unknown function DUF86
C3Y97_25825	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
C3Y97_25845	PF06265	Protein of unknown function (DUF1027)
C3Y97_25850	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
C3Y97_25855	PF07739	TipAS antibiotic-recognition domain
C3Y97_25855	PF13411	MerR HTH family regulatory protein
C3Y97_25860	PF10086	YhfC intramembrane metalloprotease
C3Y97_25880	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
C3Y97_25880	PF04055	Radical SAM superfamily
C3Y97_25885	PF01551	Peptidase family M23
C3Y97_25890	PF09560	Sporulation protein YunB (Spo_YunB)
C3Y97_25895	PF08827	Domain of unknown function (DUF1805)
C3Y97_25900	PF02872	5'-nucleotidase, C-terminal domain
C3Y97_25915	PF01458	Uncharacterized protein family (UPF0051)
C3Y97_25920	PF01592	NifU-like N terminal domain
C3Y97_25925	PF00266	Aminotransferase class-V
C3Y97_25930	PF01458	Uncharacterized protein family (UPF0051)
C3Y97_25935	PF00005	ABC transporter
C3Y97_25940	PF03180	NLPA lipoprotein
C3Y97_25945	PF03180	NLPA lipoprotein
C3Y97_25950	PF00528	Binding-protein-dependent transport system inner membrane component
C3Y97_25955	PF00005	ABC transporter
C3Y97_25955	PF09383	NIL domain
C3Y97_25965	PF00085	Thioredoxin
C3Y97_25970	PF01751	Toprim domain
C3Y97_25975	PF01597	Glycine cleavage H-protein
C3Y97_25980	PF03960	ArsC family
C3Y97_26000	PF00056	lactate/malate dehydrogenase, NAD binding domain
C3Y97_26000	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
C3Y97_26025	PF13305	Tetracyclin repressor-like, C-terminal domain
C3Y97_26025	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_26030	PF00753	Metallo-beta-lactamase superfamily
C3Y97_26035	PF02770	Acyl-CoA dehydrogenase, middle domain
C3Y97_26035	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3Y97_26035	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3Y97_26040	PF02803	Thiolase, C-terminal domain
C3Y97_26040	PF00108	Thiolase, N-terminal domain
C3Y97_26045	PF00378	Enoyl-CoA hydratase/isomerase
C3Y97_26045	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3Y97_26045	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3Y97_26055	PF14115	YuzL-like protein
C3Y97_26060	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_26060	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_26065	PF01619	Proline dehydrogenase
C3Y97_26070	PF10835	Protein of unknown function (DUF2573)
C3Y97_26075	PF01910	Thiamine-binding protein
C3Y97_26080	PF02743	Cache domain
C3Y97_26080	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_26080	PF00672	HAMP domain
C3Y97_26095	PF07690	Major Facilitator Superfamily
C3Y97_26100	PF13520	Amino acid permease
C3Y97_26115	PF02096	60Kd inner membrane protein
C3Y97_26125	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C3Y97_26125	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
C3Y97_26165	PF09335	SNARE associated Golgi protein
C3Y97_26175	PF17969	L,D-transpeptidase C-terminal domain
C3Y97_26175	PF03734	L,D-transpeptidase catalytic domain
C3Y97_26180	PF00072	Response regulator receiver domain
C3Y97_26180	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_26185	PF00989	PAS fold
C3Y97_26185	PF16736	Single Cache-like 
C3Y97_26185	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_26185	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_26200	PF09334	tRNA synthetases class I (M)
C3Y97_26200	PF08264	Anticodon-binding domain of tRNA
C3Y97_26210	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_26210	PF00672	HAMP domain
C3Y97_26210	PF02743	Cache domain
C3Y97_26215	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_26215	PF00672	HAMP domain
C3Y97_26215	PF02743	Cache domain
C3Y97_26220	PF01883	Iron-sulfur cluster assembly protein
C3Y97_26225	PF01447	Thermolysin metallopeptidase, catalytic domain
C3Y97_26225	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3Y97_26225	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3Y97_26225	PF03413	Peptidase propeptide and YPEB domain
C3Y97_26230	PF02678	Pirin
C3Y97_26230	PF17954	Quercetinase C-terminal cupin domain
C3Y97_26235	PF01047	MarR family
C3Y97_26245	PF09335	SNARE associated Golgi protein
C3Y97_26250	PF00999	Sodium/hydrogen exchanger family
C3Y97_26255	PF02080	TrkA-C domain
C3Y97_26265	PF01235	Sodium:alanine symporter family
C3Y97_26275	PF00210	Ferritin-like domain
C3Y97_26290	PF03641	Possible lysine decarboxylase
C3Y97_26300	PF00210	Ferritin-like domain
C3Y97_26305	PF07786	Protein of unknown function (DUF1624)
C3Y97_26305	PF04235	Protein of unknown function (DUF418)
C3Y97_26310	PF01773	Na+ dependent nucleoside transporter N-terminus
C3Y97_26310	PF07662	Na+ dependent nucleoside transporter C-terminus
C3Y97_26315	PF07662	Na+ dependent nucleoside transporter C-terminus
C3Y97_26315	PF01773	Na+ dependent nucleoside transporter N-terminus
C3Y97_26320	PF01235	Sodium:alanine symporter family
C3Y97_26325	PF01235	Sodium:alanine symporter family
C3Y97_26330	PF13460	NAD(P)H-binding 
C3Y97_26350	PF00248	Aldo/keto reductase family
C3Y97_26355	PF07690	Major Facilitator Superfamily
C3Y97_26360	PF01638	HxlR-like helix-turn-helix
C3Y97_26365	PF07849	Protein of unknown function (DUF1641)
C3Y97_26370	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_26375	PF00579	tRNA synthetases class I (W and Y)
C3Y97_26375	PF01479	S4 domain
C3Y97_26380	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
C3Y97_26380	PF01565	FAD binding domain 
C3Y97_26390	PF00672	HAMP domain
C3Y97_26390	PF17202	Single cache domain 3
C3Y97_26390	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_26400	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
C3Y97_26405	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
C3Y97_26420	PF07690	Major Facilitator Superfamily
C3Y97_26425	PF00005	ABC transporter
C3Y97_26425	PF12848	ABC transporter
C3Y97_26430	PF13302	Acetyltransferase (GNAT) domain
C3Y97_26435	PF06146	Phosphate-starvation-inducible E
C3Y97_26465	PF17440	Thiol-activated cytolysin beta sandwich domain
C3Y97_26465	PF01289	Thiol-activated cytolysin
C3Y97_26475	PF00005	ABC transporter
C3Y97_26480	PF01032	FecCD transport family
C3Y97_26485	PF01032	FecCD transport family
C3Y97_26495	PF00072	Response regulator receiver domain
C3Y97_26495	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_26505	PF01668	SmpB protein
C3Y97_26520	PF00773	RNB domain
C3Y97_26520	PF00575	S1 RNA binding domain
C3Y97_26520	PF17876	Cold shock domain
C3Y97_26520	PF08206	Ribonuclease B OB domain
C3Y97_26525	PF12146	Serine aminopeptidase, S33
C3Y97_26530	PF03840	Preprotein translocase SecG subunit
C3Y97_26535	PF04172	LrgB-like family 
C3Y97_26540	PF03788	LrgA family
C3Y97_26545	PF01156	Inosine-uridine preferring nucleoside hydrolase
C3Y97_26550	PF00113	Enolase, C-terminal TIM barrel domain
C3Y97_26550	PF03952	Enolase, N-terminal domain
C3Y97_26555	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
C3Y97_26555	PF01676	Metalloenzyme superfamily
C3Y97_26560	PF00121	Triosephosphate isomerase
C3Y97_26565	PF00162	Phosphoglycerate kinase
C3Y97_26570	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C3Y97_26570	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
C3Y97_26575	PF04198	Putative sugar-binding domain
C3Y97_26585	PF04963	Sigma-54 factor, core binding domain
C3Y97_26585	PF04552	Sigma-54, DNA binding domain
C3Y97_26585	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
C3Y97_26605	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3Y97_26610	PF07451	Stage V sporulation protein AD (SpoVAD)
C3Y97_26615	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
C3Y97_26625	PF04239	Protein of unknown function (DUF421)
C3Y97_26630	PF00574	Clp protease
C3Y97_26635	PF00381	PTS HPr component phosphorylation site
C3Y97_26640	PF10298	WhiA N-terminal LAGLIDADG-like domain
C3Y97_26640	PF02650	WhiA C-terminal HTH domain
C3Y97_26640	PF14527	WhiA LAGLIDADG-like domain
C3Y97_26645	PF01933	Uncharacterised protein family UPF0052
C3Y97_26650	PF03668	P-loop ATPase protein family
C3Y97_26655	PF00293	NUDIX domain
C3Y97_26665	PF07992	Pyridine nucleotide-disulphide oxidoreductase
C3Y97_26675	PF14602	Hexapeptide repeat of succinyl-transferase
C3Y97_26680	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_26685	PF01790	Prolipoprotein diacylglyceryl transferase
C3Y97_26690	PF02603	HPr Serine kinase N terminus
C3Y97_26690	PF07475	HPr Serine kinase C-terminal domain
C3Y97_26695	PF04020	Mycobacterial 4 TMS phage holin, superfamily IV
C3Y97_26705	PF17760	UvrA interaction domain
C3Y97_26705	PF00005	ABC transporter
C3Y97_26705	PF17755	UvrA DNA-binding domain
C3Y97_26710	PF00271	Helicase conserved C-terminal domain
C3Y97_26710	PF02151	UvrB/uvrC motif
C3Y97_26710	PF17757	UvrB interaction domain
C3Y97_26710	PF04851	Type III restriction enzyme, res subunit
C3Y97_26710	PF12344	Ultra-violet resistance protein B
C3Y97_26725	PF13411	MerR HTH family regulatory protein
C3Y97_26725	PF07739	TipAS antibiotic-recognition domain
C3Y97_26740	PF03601	Conserved hypothetical protein 698
C3Y97_26745	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_26745	PF03466	LysR substrate binding domain
C3Y97_26750	PF00376	MerR family regulatory protein
C3Y97_26750	PF09278	MerR, DNA binding
C3Y97_26755	PF03358	NADPH-dependent FMN reductase
C3Y97_26765	PF01906	Putative heavy-metal-binding
C3Y97_26770	PF00005	ABC transporter
C3Y97_26770	PF00664	ABC transporter transmembrane region
C3Y97_26775	PF17820	PDZ domain
C3Y97_26780	PF17820	PDZ domain
C3Y97_26780	PF01471	Putative peptidoglycan binding domain
C3Y97_26780	PF03572	Peptidase family S41
C3Y97_26785	PF18075	FtsX extracellular domain
C3Y97_26785	PF02687	FtsX-like permease family
C3Y97_26790	PF00005	ABC transporter
C3Y97_26800	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
C3Y97_26815	PF02810	SEC-C motif
C3Y97_26815	PF07517	SecA DEAD-like domain
C3Y97_26815	PF01043	SecA preprotein cross-linking domain
C3Y97_26815	PF07516	SecA Wing and Scaffold domain
C3Y97_26820	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
C3Y97_26820	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
C3Y97_26825	PF00313	'Cold-shock' DNA-binding domain
C3Y97_26835	PF00271	Helicase conserved C-terminal domain
C3Y97_26835	PF04851	Type III restriction enzyme, res subunit
C3Y97_26840	PF00877	NlpC/P60 family
C3Y97_26840	PF01476	LysM domain
C3Y97_26845	PF01638	HxlR-like helix-turn-helix
C3Y97_26855	PF02645	Uncharacterised protein, DegV family COG1307
C3Y97_26860	PF01205	Uncharacterized protein family UPF0029
C3Y97_26860	PF09186	Domain of unknown function (DUF1949)
C3Y97_26865	PF03816	Cell envelope-related transcriptional attenuator domain
C3Y97_26870	PF02350	UDP-N-acetylglucosamine 2-epimerase
C3Y97_26875	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3Y97_26875	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3Y97_26875	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3Y97_26880	PF00953	Glycosyl transferase family 4
C3Y97_26890	PF00158	Sigma-54 interaction domain
C3Y97_26890	PF00874	PRD domain
C3Y97_26890	PF03610	PTS system fructose IIA component
C3Y97_26900	PF02417	Chromate transporter
C3Y97_26905	PF04794	YdjC-like protein
C3Y97_26910	PF02056	Family 4 glycosyl hydrolase
C3Y97_26910	PF11975	Family 4 glycosyl hydrolase C-terminal domain
C3Y97_26915	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
C3Y97_26920	PF02378	Phosphotransferase system, EIIC 
C3Y97_26925	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3Y97_26935	PF02675	S-adenosylmethionine decarboxylase 
C3Y97_26940	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
C3Y97_26945	PF02378	Phosphotransferase system, EIIC 
C3Y97_26950	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
C3Y97_26955	PF00375	Sodium:dicarboxylate symporter family
C3Y97_26975	PF03466	LysR substrate binding domain
C3Y97_26975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
C3Y97_26985	PF01654	Cytochrome bd terminal oxidase subunit I
C3Y97_26990	PF02322	Cytochrome bd terminal oxidase subunit II
C3Y97_26995	PF02040	Arsenical pump membrane protein
C3Y97_27000	PF01964	Radical SAM ThiC family
C3Y97_27000	PF13667	ThiC-associated domain 
C3Y97_27025	PF02652	L-lactate permease
C3Y97_27035	PF09988	Uncharacterized metal-binding protein (DUF2227)
C3Y97_27050	PF00884	Sulfatase
C3Y97_27060	PF01063	Amino-transferase class IV
C3Y97_27065	PF00877	NlpC/P60 family
C3Y97_27065	PF01476	LysM domain
C3Y97_27070	PF07662	Na+ dependent nucleoside transporter C-terminus
C3Y97_27070	PF01773	Na+ dependent nucleoside transporter N-terminus
C3Y97_27090	PF02028	BCCT, betaine/carnitine/choline family transporter
C3Y97_27100	PF01476	LysM domain
C3Y97_27100	PF06725	3D domain
C3Y97_27130	PF04434	SWIM zinc finger
C3Y97_27135	PF00176	SNF2 family N-terminal domain
C3Y97_27135	PF00271	Helicase conserved C-terminal domain
C3Y97_27135	PF12419	SNF2 Helicase protein 
C3Y97_27165	PF04545	Sigma-70, region 4
C3Y97_27165	PF04542	Sigma-70 region 2 
C3Y97_27175	PF02687	FtsX-like permease family
C3Y97_27175	PF12704	MacB-like periplasmic core domain
C3Y97_27180	PF00005	ABC transporter
C3Y97_27200	PF07690	Major Facilitator Superfamily
C3Y97_27215	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_27215	PF00989	PAS fold
C3Y97_27215	PF16736	Single Cache-like 
C3Y97_27215	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_27220	PF00072	Response regulator receiver domain
C3Y97_27220	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_27225	PF16363	GDP-mannose 4,6 dehydratase
C3Y97_27240	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
C3Y97_27240	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
C3Y97_27240	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
C3Y97_27245	PF00534	Glycosyl transferases group 1
C3Y97_27250	PF00535	Glycosyl transferase family 2
C3Y97_27280	PF02397	Bacterial sugar transferase
C3Y97_27285	PF00483	Nucleotidyl transferase
C3Y97_27295	PF13614	AAA domain
C3Y97_27300	PF13807	G-rich domain on putative tyrosine kinase
C3Y97_27300	PF02706	Chain length determinant protein
C3Y97_27305	PF13614	AAA domain
C3Y97_27310	PF07977	FabA-like domain
C3Y97_27320	PF12116	Stage III sporulation protein D
C3Y97_27335	PF01551	Peptidase family M23
C3Y97_27345	PF00005	ABC transporter
C3Y97_27350	PF04397	LytTr DNA-binding domain
C3Y97_27350	PF00072	Response regulator receiver domain
C3Y97_27355	PF08486	Stage II sporulation protein
C3Y97_27360	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3Y97_27370	PF06612	Protein of unknown function (DUF1146)
C3Y97_27375	PF00361	Proton-conducting membrane transporter
C3Y97_27380	PF00361	Proton-conducting membrane transporter
C3Y97_27385	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
C3Y97_27385	PF00361	Proton-conducting membrane transporter
C3Y97_27385	PF01010	NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
C3Y97_27390	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
C3Y97_27395	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
C3Y97_27405	PF00146	NADH dehydrogenase
C3Y97_27410	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
C3Y97_27415	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
C3Y97_27420	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
C3Y97_27425	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
C3Y97_27430	PF03707	Bacterial signalling protein N terminal repeat
C3Y97_27430	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_27430	PF00563	EAL domain
C3Y97_27445	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
C3Y97_27445	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
C3Y97_27450	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3Y97_27450	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3Y97_27455	PF00231	ATP synthase
C3Y97_27460	PF02874	ATP synthase alpha/beta family, beta-barrel domain
C3Y97_27460	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3Y97_27460	PF00306	ATP synthase alpha/beta chain, C terminal domain
C3Y97_27465	PF00213	ATP synthase delta (OSCP) subunit
C3Y97_27470	PF00430	ATP synthase B/B' CF(0)
C3Y97_27475	PF00137	ATP synthase subunit C
C3Y97_27480	PF00119	ATP synthase A chain
C3Y97_27485	PF03899	ATP synthase I chain
C3Y97_27505	PF00464	Serine hydroxymethyltransferase
C3Y97_27510	PF04260	Protein of unknown function (DUF436) 
C3Y97_27515	PF02502	Ribose/Galactose Isomerase
C3Y97_27520	PF01451	Low molecular weight phosphotyrosine protein phosphatase
C3Y97_27530	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
C3Y97_27535	PF07681	DoxX
C3Y97_27540	PF01613	Flavin reductase like domain
C3Y97_27555	PF02659	Putative manganese efflux pump
C3Y97_27560	PF01300	Telomere recombination
C3Y97_27560	PF03481	Putative GTP-binding controlling metal-binding
C3Y97_27570	PF09551	Stage II sporulation protein R (spore_II_R)
C3Y97_27575	PF17827	PrmC N-terminal domain
C3Y97_27575	PF13847	Methyltransferase domain
C3Y97_27580	PF03462	PCRF domain
C3Y97_27580	PF00472	RF-1 domain
C3Y97_27585	PF00265	Thymidine kinase
C3Y97_27590	PF01197	Ribosomal protein L31
C3Y97_27600	PF07497	Rho termination factor, RNA-binding domain
C3Y97_27600	PF07498	Rho termination factor, N-terminal domain
C3Y97_27600	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
C3Y97_27605	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
C3Y97_27610	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
C3Y97_27615	PF01116	Fructose-bisphosphate aldolase class-II
C3Y97_27620	PF00072	Response regulator receiver domain
C3Y97_27625	PF10740	Domain of unknown function (DUF2529)
C3Y97_27630	PF00117	Glutamine amidotransferase class-I
C3Y97_27630	PF06418	CTP synthase N-terminus
C3Y97_27635	PF05066	HB1, ASXL, restriction endonuclease HTH domain
C3Y97_27645	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3Y97_27645	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3Y97_27645	PF02770	Acyl-CoA dehydrogenase, middle domain
C3Y97_27650	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
C3Y97_27650	PF02770	Acyl-CoA dehydrogenase, middle domain
C3Y97_27650	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
C3Y97_27655	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
C3Y97_27655	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
C3Y97_27660	PF02803	Thiolase, C-terminal domain
C3Y97_27660	PF00108	Thiolase, N-terminal domain
C3Y97_27665	PF13183	4Fe-4S dicluster domain
C3Y97_27665	PF02754	Cysteine-rich domain
C3Y97_27670	PF13091	PLD-like domain
C3Y97_27675	PF03851	UV-endonuclease UvdE
C3Y97_27680	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_27680	PF03707	Bacterial signalling protein N terminal repeat
C3Y97_27680	PF00563	EAL domain
C3Y97_27695	PF07504	Fungalysin/Thermolysin Propeptide Motif
C3Y97_27695	PF01447	Thermolysin metallopeptidase, catalytic domain
C3Y97_27695	PF02868	Thermolysin metallopeptidase, alpha-helical domain
C3Y97_27695	PF03413	Peptidase propeptide and YPEB domain
C3Y97_27700	PF00072	Response regulator receiver domain
C3Y97_27700	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_27705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_27705	PF07730	Histidine kinase
C3Y97_27715	PF00005	ABC transporter
C3Y97_27720	PF00557	Metallopeptidase family M24
C3Y97_27730	PF04389	Peptidase family M28
C3Y97_27730	PF02225	PA domain
C3Y97_27750	PF08281	Sigma-70, region 4
C3Y97_27750	PF04542	Sigma-70 region 2 
C3Y97_27755	PF08281	Sigma-70, region 4
C3Y97_27755	PF04542	Sigma-70 region 2 
C3Y97_27760	PF05746	DALR anticodon binding domain
C3Y97_27760	PF00750	tRNA synthetases class I (R)
C3Y97_27760	PF03485	Arginyl tRNA synthetase N terminal domain
C3Y97_27765	PF09148	Domain of unknown function (DUF1934)
C3Y97_27770	PF02016	LD-carboxypeptidase N-terminal domain
C3Y97_27770	PF17676	LD-carboxypeptidase C-terminal domain
C3Y97_27785	PF00491	Arginase family
C3Y97_27790	PF17284	Spermidine synthase tetramerisation domain
C3Y97_27795	PF07690	Major Facilitator Superfamily
C3Y97_27800	PF13411	MerR HTH family regulatory protein
C3Y97_27805	PF03009	Glycerophosphoryl diester phosphodiesterase family
C3Y97_27810	PF00905	Penicillin binding protein transpeptidase domain
C3Y97_27810	PF00912	Transglycosylase
C3Y97_27815	PF08741	YwhD family
C3Y97_27820	PF02163	Peptidase family M50
C3Y97_27825	PF01361	Tautomerase enzyme
C3Y97_27830	PF01966	HD domain
C3Y97_27835	PF01497	Periplasmic binding protein
C3Y97_27840	PF00005	ABC transporter
C3Y97_27845	PF01032	FecCD transport family
C3Y97_27850	PF01032	FecCD transport family
C3Y97_27855	PF07293	Protein of unknown function (DUF1450)
C3Y97_27865	PF03099	Biotin/lipoate A/B protein ligase family
C3Y97_27870	PF01515	Phosphate acetyl/butaryl transferase
C3Y97_27880	PF07943	Penicillin-binding protein 5, C-terminal domain
C3Y97_27880	PF00768	D-alanyl-D-alanine carboxypeptidase
C3Y97_27885	PF07486	Cell Wall Hydrolase
C3Y97_27890	PF09671	Spore coat protein (Spore_GerQ)
C3Y97_27895	PF04241	Protein of unknown function (DUF423)
C3Y97_27905	PF02254	TrkA-N domain
C3Y97_27905	PF07885	Ion channel
C3Y97_27910	PF00860	Permease family
C3Y97_27920	PF12823	Domain of unknown function (DUF3817)
C3Y97_27925	PF03167	Uracil DNA glycosylase superfamily
C3Y97_27930	PF12679	ABC-2 family transporter protein
C3Y97_27935	PF00005	ABC transporter
C3Y97_27940	PF13472	GDSL-like Lipase/Acylhydrolase family
C3Y97_27945	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
C3Y97_27945	PF00356	Bacterial regulatory proteins, lacI family
C3Y97_27955	PF03447	Homoserine dehydrogenase, NAD binding domain
C3Y97_27955	PF01842	ACT domain
C3Y97_27955	PF00742	Homoserine dehydrogenase
C3Y97_27960	PF04204	Homoserine O-succinyltransferase 
C3Y97_27965	PF01053	Cys/Met metabolism PLP-dependent enzyme
C3Y97_27975	PF13419	Haloacid dehalogenase-like hydrolase
C3Y97_27980	PF00027	Cyclic nucleotide-binding domain
C3Y97_27985	PF02525	Flavodoxin-like fold
C3Y97_27990	PF00196	Bacterial regulatory proteins, luxR family
C3Y97_27990	PF00072	Response regulator receiver domain
C3Y97_27995	PF07730	Histidine kinase
C3Y97_27995	PF13185	GAF domain
C3Y97_28000	PF08543	Phosphomethylpyrimidine kinase
C3Y97_28005	PF07694	5TMR of 5TMR-LYT
C3Y97_28005	PF00990	Diguanylate cyclase, GGDEF domain
C3Y97_28010	PF04328	Selenoprotein, putative 
C3Y97_28015	PF13722	5TM C-terminal transporter carbon starvation CstA
C3Y97_28015	PF02554	Carbon starvation protein CstA
C3Y97_28020	PF00072	Response regulator receiver domain
C3Y97_28020	PF04397	LytTr DNA-binding domain
C3Y97_28025	PF07690	Major Facilitator Superfamily
C3Y97_28035	PF03808	Glycosyl transferase WecB/TagA/CpsF family
C3Y97_28040	PF13439	Glycosyltransferase Family 4
C3Y97_28040	PF00534	Glycosyl transferases group 1
C3Y97_28050	PF03458	UPF0126 domain
C3Y97_28055	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
C3Y97_28065	PF03061	Thioesterase superfamily
C3Y97_28075	PF00535	Glycosyl transferase family 2
C3Y97_28090	PF00535	Glycosyl transferase family 2
C3Y97_28095	PF12848	ABC transporter
C3Y97_28095	PF00005	ABC transporter
C3Y97_28100	PF03062	MBOAT, membrane-bound O-acyltransferase family
C3Y97_28110	PF00440	Bacterial regulatory proteins, tetR family
C3Y97_28115	PF00873	AcrB/AcrD/AcrF family
C3Y97_28120	PF01641	SelR domain
C3Y97_28120	PF01625	Peptide methionine sulfoxide reductase
C3Y97_28125	PF01594	AI-2E family transporter
C3Y97_28130	PF04172	LrgB-like family 
C3Y97_28135	PF03788	LrgA family
C3Y97_28140	PF00072	Response regulator receiver domain
C3Y97_28140	PF04397	LytTr DNA-binding domain
C3Y97_28145	PF06580	Histidine kinase
C3Y97_28145	PF13492	GAF domain
C3Y97_28145	PF07694	5TMR of 5TMR-LYT
C3Y97_28145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_28150	PF07690	Major Facilitator Superfamily
C3Y97_28155	PF02028	BCCT, betaine/carnitine/choline family transporter
C3Y97_28160	PF02898	Nitric oxide synthase, oxygenase domain
C3Y97_28170	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
C3Y97_28170	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
C3Y97_28180	PF02293	AmiS/UreI family transporter
C3Y97_28190	PF16363	GDP-mannose 4,6 dehydratase
C3Y97_28195	PF03006	Haemolysin-III related
C3Y97_28205	PF03880	DbpA RNA binding domain   
C3Y97_28205	PF00270	DEAD/DEAH box helicase
C3Y97_28205	PF00271	Helicase conserved C-terminal domain
C3Y97_28210	PF00478	IMP dehydrogenase / GMP reductase domain
C3Y97_28215	PF08439	Oligopeptidase F
C3Y97_28215	PF01432	Peptidase family M3
C3Y97_28225	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_28225	PF13188	PAS domain
C3Y97_28225	PF00989	PAS fold
C3Y97_28225	PF13426	PAS domain
C3Y97_28225	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_28230	PF02590	Predicted SPOUT methyltransferase
C3Y97_28240	PF13180	PDZ domain
C3Y97_28245	PF00753	Metallo-beta-lactamase superfamily
C3Y97_28250	PF09648	YycH protein
C3Y97_28260	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
C3Y97_28260	PF00512	His Kinase A (phospho-acceptor) domain
C3Y97_28260	PF13426	PAS domain
C3Y97_28260	PF00672	HAMP domain
C3Y97_28265	PF00486	Transcriptional regulatory protein, C terminal
C3Y97_28265	PF00072	Response regulator receiver domain
C3Y97_28290	PF00709	Adenylosuccinate synthetase
C3Y97_28295	PF03796	DnaB-like helicase C terminal domain
C3Y97_28295	PF00772	DnaB-like helicase N terminal domain
C3Y97_28300	PF01281	Ribosomal protein L9, N-terminal domain
C3Y97_28300	PF03948	Ribosomal protein L9, C-terminal domain
C3Y97_28305	PF01368	DHH family
C3Y97_28305	PF02272	DHHA1 domain
C3Y97_28310	PF09991	Predicted membrane protein (DUF2232)
C3Y97_28315	PF01084	Ribosomal protein S18
C3Y97_28320	PF00436	Single-strand binding protein family
C3Y97_28325	PF01250	Ribosomal protein S6
C3Y97_28330	PF06071	Protein of unknown function (DUF933)
C3Y97_28330	PF01926	50S ribosome-binding GTPase
C3Y97_28335	PF06107	Bacterial protein of unknown function (DUF951)
C3Y97_28340	PF00924	Mechanosensitive ion channel
C3Y97_28345	PF06866	Protein of unknown function (DUF1256)
C3Y97_28350	PF02195	ParB-like nuclease domain
C3Y97_28350	PF17762	HTH domain found in ParB protein
C3Y97_28355	PF13614	AAA domain
C3Y97_28360	PF17762	HTH domain found in ParB protein
C3Y97_28360	PF02195	ParB-like nuclease domain
C3Y97_28365	PF02527	rRNA small subunit methyltransferase G
C3Y97_28370	PF13932	GidA associated domain
C3Y97_28370	PF01134	Glucose inhibited division protein A
C3Y97_28375	PF12631	MnmE helical domain
C3Y97_28375	PF10396	GTP-binding protein TrmE N-terminus
C3Y97_28375	PF01926	50S ribosome-binding GTPase
C3Y97_28380	PF01424	R3H domain
C3Y97_28380	PF14804	Jag N-terminus
C3Y97_28385	PF02096	60Kd inner membrane protein
C3Y97_28390	PF00825	Ribonuclease P
C3Y97_28395	PF00468	Ribosomal protein L34
