locus-tag class description LIT25_00005 PF00308 Bacterial dnaA protein LIT25_00005 PF08299 Bacterial dnaA protein helix-turn-helix LIT25_00005 PF11638 DnaA N-terminal domain LIT25_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LIT25_00010 PF02767 DNA polymerase III beta subunit, central domain LIT25_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LIT25_00020 PF02463 RecF/RecN/SMC N terminal domain LIT25_00025 PF04025 Domain of unknown function (DUF370) LIT25_00030 PF00204 DNA gyrase B LIT25_00030 PF00986 DNA gyrase B subunit, carboxyl terminus LIT25_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_00030 PF01751 Toprim domain LIT25_00050 PF03989 DNA gyrase C-terminal domain, beta-propeller LIT25_00050 PF00521 DNA gyrase/topoisomerase IV, subunit A LIT25_00055 PF01966 HD domain LIT25_00085 PF14175 YaaC-like Protein LIT25_00090 PF00571 CBS domain LIT25_00090 PF00478 IMP dehydrogenase / GMP reductase domain LIT25_00095 PF07943 Penicillin-binding protein 5, C-terminal domain LIT25_00095 PF00768 D-alanyl-D-alanine carboxypeptidase LIT25_00100 PF01680 SOR/SNZ family LIT25_00105 PF01174 SNO glutamine amidotransferase family LIT25_00110 PF02403 Seryl-tRNA synthetase N-terminal domain LIT25_00110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT25_00120 PF01712 Deoxynucleoside kinase LIT25_00125 PF01712 Deoxynucleoside kinase LIT25_00130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_00135 PF01613 Flavin reductase like domain LIT25_00140 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT25_00150 PF01476 LysM domain LIT25_00150 PF00704 Glycosyl hydrolases family 18 LIT25_00155 PF00857 Isochorismatase family LIT25_00160 PF14437 MafB19-like deaminase LIT25_00170 PF12169 DNA polymerase III subunits gamma and tau domain III LIT25_00175 PF02575 YbaB/EbfC DNA-binding family LIT25_00180 PF02132 RecR protein LIT25_00180 PF13662 Toprim domain LIT25_00185 PF10704 Protein of unknown function (DUF2508) LIT25_00190 PF07441 SigmaK-factor processing regulatory protein BofA LIT25_00220 PF10764 Inhibitor of sigma-G Gin LIT25_00225 PF01276 Orn/Lys/Arg decarboxylase, major domain LIT25_00225 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LIT25_00230 PF02223 Thymidylate kinase LIT25_00235 PF06153 Cyclic-di-AMP receptor LIT25_00240 PF03885 Protein of unknown function (DUF327) LIT25_00245 PF09115 DNA polymerase III, delta subunit, C terminal LIT25_00250 PF04468 PSP1 C-terminal conserved region LIT25_00255 PF06156 Initiation control protein YabA LIT25_00260 PF05175 Methyltransferase small domain LIT25_00265 PF01541 GIY-YIG catalytic domain LIT25_00270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_00275 PF18277 AbrB C-terminal domain LIT25_00275 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIT25_00280 PF08264 Anticodon-binding domain of tRNA LIT25_00280 PF09334 tRNA synthetases class I (M) LIT25_00280 PF01588 Putative tRNA binding domain LIT25_00285 PF01026 TatD related DNase LIT25_00290 PF07501 G5 domain LIT25_00290 PF03990 G5-linked-Ubiquitin-like domain LIT25_00290 PF06725 3D domain LIT25_00295 PF13331 Domain of unknown function (DUF4093) LIT25_00295 PF13662 Toprim domain LIT25_00300 PF00398 Ribosomal RNA adenine dimethylase LIT25_00305 PF05582 YabG peptidase U57 LIT25_00310 PF06257 Biofilm formation stimulator VEG LIT25_00315 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT25_00320 PF00288 GHMP kinases N terminal domain LIT25_00320 PF08544 GHMP kinases C terminal LIT25_00325 PF00156 Phosphoribosyl transferase domain LIT25_00325 PF09182 Bacterial purine repressor, N-terminal LIT25_00330 PF01042 Endoribonuclease L-PSP LIT25_00335 PF04026 SpoVG LIT25_00340 PF00483 Nucleotidyl transferase LIT25_00340 PF00132 Bacterial transferase hexapeptide (six repeats) LIT25_00345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LIT25_00345 PF14572 Phosphoribosyl synthetase-associated domain LIT25_00350 PF01386 Ribosomal L25p family LIT25_00350 PF14693 Ribosomal protein TL5, C-terminal domain LIT25_00355 PF01195 Peptidyl-tRNA hydrolase LIT25_00360 PF10955 Protein of unknown function (DUF2757) LIT25_00365 PF17757 UvrB interaction domain LIT25_00365 PF02559 CarD-like/TRCF domain LIT25_00365 PF00270 DEAD/DEAH box helicase LIT25_00365 PF00271 Helicase conserved C-terminal domain LIT25_00365 PF03461 TRCF domain LIT25_00370 PF15714 Stage V sporulation protein T C-terminal, transcription factor LIT25_00370 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIT25_00375 PF01943 Polysaccharide biosynthesis protein LIT25_00375 PF14667 Polysaccharide biosynthesis C-terminal domain LIT25_00380 PF03819 MazG nucleotide pyrophosphohydrolase domain LIT25_00380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_00385 PF01479 S4 domain LIT25_00390 PF07873 YabP family LIT25_00395 PF09578 Spore cortex protein YabQ (Spore_YabQ) LIT25_00400 PF04977 Septum formation initiator LIT25_00405 PF00575 S1 RNA binding domain LIT25_00420 PF07228 Stage II sporulation protein E (SpoIIE) LIT25_00425 PF00092 von Willebrand factor type A domain LIT25_00430 PF00069 Protein kinase domain LIT25_00435 PF01171 PP-loop family LIT25_00435 PF11734 TilS substrate C-terminal domain LIT25_00435 PF09179 TilS substrate binding domain LIT25_00440 PF00156 Phosphoribosyl transferase domain LIT25_00445 PF01434 Peptidase family M41 LIT25_00445 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_00445 PF17862 AAA+ lid domain LIT25_00445 PF06480 FtsH Extracellular LIT25_00450 PF03309 Type III pantothenate kinase LIT25_00455 PF01430 Hsp33 protein LIT25_00460 PF13145 PPIC-type PPIASE domain LIT25_00465 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_00470 PF00425 chorismate binding enzyme LIT25_00470 PF04715 Anthranilate synthase component I, N terminal region LIT25_00475 PF00117 Glutamine amidotransferase class-I LIT25_00480 PF01063 Amino-transferase class IV LIT25_00485 PF00809 Pterin binding enzyme LIT25_00490 PF02152 Dihydroneopterin aldolase LIT25_00495 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LIT25_00500 PF01381 Helix-turn-helix LIT25_00505 PF01207 Dihydrouridine synthase (Dus) LIT25_00510 PF01336 OB-fold nucleic acid binding domain LIT25_00510 PF00152 tRNA synthetases class II (D, K and N) LIT25_00590 PF17727 CtsR C-terminal dimerization domain LIT25_00590 PF05848 CtsR N-terminal HTH domain LIT25_00595 PF02151 UvrB/uvrC motif LIT25_00600 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain LIT25_00605 PF10431 C-terminal, D2-small domain, of ClpB protein LIT25_00605 PF02861 Clp amino terminal domain, pathogenicity island component LIT25_00605 PF17871 AAA lid domain LIT25_00605 PF07724 AAA domain (Cdc48 subfamily) LIT25_00605 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_00610 PF18073 Rubredoxin metal binding domain LIT25_00615 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIT25_00615 PF10635 DisA bacterial checkpoint controller linker region LIT25_00625 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LIT25_00630 PF02542 YgbB family LIT25_00635 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIT25_00640 PF06426 Serine acetyltransferase, N-terminal LIT25_00640 PF00132 Bacterial transferase hexapeptide (six repeats) LIT25_00645 PF01406 tRNA synthetases class I (C) catalytic domain LIT25_00645 PF09190 DALR domain LIT25_00650 PF00636 Ribonuclease III domain LIT25_00655 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIT25_00655 PF00588 SpoU rRNA Methylase family LIT25_00660 PF05991 YacP-like NYN domain LIT25_00665 PF08281 Sigma-70, region 4 LIT25_00665 PF04542 Sigma-70 region 2 LIT25_00670 PF00471 Ribosomal protein L33 LIT25_00675 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LIT25_00680 PF00467 KOW motif LIT25_00680 PF02357 Transcription termination factor nusG LIT25_00685 PF00298 Ribosomal protein L11, RNA binding domain LIT25_00685 PF03946 Ribosomal protein L11, N-terminal domain LIT25_00690 PF00687 Ribosomal protein L1p/L10e family LIT25_00695 PF00466 Ribosomal protein L10 LIT25_00700 PF16320 Ribosomal protein L7/L12 dimerisation domain LIT25_00700 PF00542 Ribosomal protein L7/L12 C-terminal domain LIT25_00705 PF05175 Methyltransferase small domain LIT25_00710 PF04560 RNA polymerase Rpb2, domain 7 LIT25_00710 PF00562 RNA polymerase Rpb2, domain 6 LIT25_00710 PF10385 RNA polymerase beta subunit external 1 domain LIT25_00710 PF04565 RNA polymerase Rpb2, domain 3 LIT25_00710 PF04561 RNA polymerase Rpb2, domain 2 LIT25_00710 PF04563 RNA polymerase beta subunit LIT25_00715 PF04997 RNA polymerase Rpb1, domain 1 LIT25_00715 PF04983 RNA polymerase Rpb1, domain 3 LIT25_00715 PF05000 RNA polymerase Rpb1, domain 4 LIT25_00715 PF04998 RNA polymerase Rpb1, domain 5 LIT25_00715 PF00623 RNA polymerase Rpb1, domain 2 LIT25_00720 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LIT25_00725 PF00164 Ribosomal protein S12/S23 LIT25_00730 PF00177 Ribosomal protein S7p/S5e LIT25_00735 PF00679 Elongation factor G C-terminus LIT25_00735 PF14492 Elongation Factor G, domain II LIT25_00735 PF03764 Elongation factor G, domain IV LIT25_00735 PF00009 Elongation factor Tu GTP binding domain LIT25_00735 PF03144 Elongation factor Tu domain 2 LIT25_00740 PF03144 Elongation factor Tu domain 2 LIT25_00740 PF03143 Elongation factor Tu C-terminal domain LIT25_00740 PF00009 Elongation factor Tu GTP binding domain LIT25_00745 PF00338 Ribosomal protein S10p/S20e LIT25_00750 PF00297 Ribosomal protein L3 LIT25_00755 PF00573 Ribosomal protein L4/L1 family LIT25_00760 PF00276 Ribosomal protein L23 LIT25_00765 PF00181 Ribosomal Proteins L2, RNA binding domain LIT25_00765 PF03947 Ribosomal Proteins L2, C-terminal domain LIT25_00770 PF00203 Ribosomal protein S19 LIT25_00775 PF00237 Ribosomal protein L22p/L17e LIT25_00780 PF07650 KH domain LIT25_00780 PF00189 Ribosomal protein S3, C-terminal domain LIT25_00785 PF00252 Ribosomal protein L16p/L10e LIT25_00790 PF00831 Ribosomal L29 protein LIT25_00795 PF00366 Ribosomal protein S17 LIT25_00800 PF00238 Ribosomal protein L14p/L23e LIT25_00805 PF00467 KOW motif LIT25_00805 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LIT25_00810 PF00281 Ribosomal protein L5 LIT25_00810 PF00673 ribosomal L5P family C-terminus LIT25_00815 PF00253 Ribosomal protein S14p/S29e LIT25_00820 PF00410 Ribosomal protein S8 LIT25_00825 PF00347 Ribosomal protein L6 LIT25_00830 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LIT25_00835 PF03719 Ribosomal protein S5, C-terminal domain LIT25_00835 PF00333 Ribosomal protein S5, N-terminal domain LIT25_00840 PF00327 Ribosomal protein L30p/L7e LIT25_00845 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LIT25_00850 PF00344 SecY translocase LIT25_00855 PF05191 Adenylate kinase, active site lid LIT25_00860 PF00557 Metallopeptidase family M24 LIT25_00870 PF01176 Translation initiation factor 1A / IF-1 LIT25_00875 PF00444 Ribosomal protein L36 LIT25_00880 PF00416 Ribosomal protein S13/S18 LIT25_00885 PF00411 Ribosomal protein S11 LIT25_00890 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LIT25_00890 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LIT25_00890 PF01000 RNA polymerase Rpb3/RpoA insert domain LIT25_00895 PF01196 Ribosomal protein L17 LIT25_00900 PF00005 ABC transporter LIT25_00905 PF00005 ABC transporter LIT25_00910 PF02361 Cobalt transport protein LIT25_00915 PF01416 tRNA pseudouridine synthase LIT25_00920 PF00572 Ribosomal protein L13 LIT25_00925 PF00380 Ribosomal protein S9/S16 LIT25_00980 PF06013 Proteins of 100 residues with WXG LIT25_00995 PF04454 Encapsulating protein for peroxidase LIT25_01015 PF00380 Ribosomal protein S9/S16 LIT25_01025 PF10730 Protein of unknown function (DUF2521) LIT25_01030 PF01520 N-acetylmuramoyl-L-alanine amidase LIT25_01035 PF10609 NUBPL iron-transfer P-loop NTPase LIT25_01040 PF17898 Spore germination GerD central core domain LIT25_01045 PF14089 KinB-signalling pathway activation in sporulation LIT25_01050 PF01522 Polysaccharide deacetylase LIT25_01125 PF00491 Arginase family LIT25_01130 PF08281 Sigma-70, region 4 LIT25_01130 PF04542 Sigma-70 region 2 LIT25_01135 PF13490 Putative zinc-finger LIT25_01140 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIT25_01145 PF07949 YbbR-like protein LIT25_01150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIT25_01150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIT25_01150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIT25_01150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIT25_01155 PF01380 SIS domain LIT25_01160 PF00392 Bacterial regulatory proteins, gntR family LIT25_01160 PF00155 Aminotransferase class I and II LIT25_01165 PF00892 EamA-like transporter family LIT25_01180 PF00478 IMP dehydrogenase / GMP reductase domain LIT25_01185 PF00188 Cysteine-rich secretory protein family LIT25_01190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIT25_01190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIT25_01195 PF01594 AI-2E family transporter LIT25_01200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LIT25_01210 PF00571 CBS domain LIT25_01210 PF00005 ABC transporter LIT25_01215 PF02566 OsmC-like protein LIT25_01240 PF03551 Transcriptional regulator PadR-like family LIT25_01245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_01250 PF01613 Flavin reductase like domain LIT25_01255 PF00814 Glycoprotease family LIT25_01255 PF00583 Acetyltransferase (GNAT) family LIT25_01270 PF17862 AAA+ lid domain LIT25_01270 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_01270 PF06480 FtsH Extracellular LIT25_01270 PF01434 Peptidase family M41 LIT25_01275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_01280 PF00664 ABC transporter transmembrane region LIT25_01280 PF00005 ABC transporter LIT25_01285 PF08892 YqcI/YcgG family LIT25_01300 PF13649 Methyltransferase domain LIT25_01315 PF00171 Aldehyde dehydrogenase family LIT25_01320 PF00005 ABC transporter LIT25_01335 PF00440 Bacterial regulatory proteins, tetR family LIT25_01345 PF17922 Tetracyclin repressor-like, C-terminal domain LIT25_01345 PF00440 Bacterial regulatory proteins, tetR family LIT25_01360 PF00392 Bacterial regulatory proteins, gntR family LIT25_01360 PF07702 UTRA domain LIT25_01365 PF00005 ABC transporter LIT25_01375 PF01594 AI-2E family transporter LIT25_01380 PF09335 SNARE associated Golgi protein LIT25_01390 PF00296 Luciferase-like monooxygenase LIT25_01395 PF00085 Thioredoxin LIT25_01400 PF01820 D-ala D-ala ligase N-terminus LIT25_01400 PF07478 D-ala D-ala ligase C-terminus LIT25_01405 PF08245 Mur ligase middle domain LIT25_01405 PF02875 Mur ligase family, glutamate ligase domain LIT25_01405 PF01225 Mur ligase family, catalytic domain LIT25_01410 PF00561 alpha/beta hydrolase fold LIT25_01425 PF03703 Bacterial PH domain LIT25_01430 PF03703 Bacterial PH domain LIT25_01435 PF01694 Rhomboid family LIT25_01440 PF01648 4'-phosphopantetheinyl transferase superfamily LIT25_01450 PF00842 Alanine racemase, C-terminal domain LIT25_01450 PF01168 Alanine racemase, N-terminal domain LIT25_01455 PF01402 Ribbon-helix-helix protein, copG family LIT25_01460 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LIT25_01465 PF01740 STAS domain LIT25_01465 PF08678 Rsbr N terminal LIT25_01470 PF01740 STAS domain LIT25_01475 PF13581 Histidine kinase-like ATPase domain LIT25_01480 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain LIT25_01480 PF07228 Stage II sporulation protein E (SpoIIE) LIT25_01485 PF01740 STAS domain LIT25_01490 PF13581 Histidine kinase-like ATPase domain LIT25_01495 PF04539 Sigma-70 region 3 LIT25_01495 PF04545 Sigma-70, region 4 LIT25_01495 PF04542 Sigma-70 region 2 LIT25_01500 PF07228 Stage II sporulation protein E (SpoIIE) LIT25_01505 PF00575 S1 RNA binding domain LIT25_01505 PF17674 HHH domain LIT25_01505 PF16921 Tex protein YqgF-like domain LIT25_01505 PF09371 Tex-like protein N-terminal domain LIT25_01515 PF10263 SprT-like family LIT25_01605 PF02769 AIR synthase related protein, C-terminal domain LIT25_01605 PF00586 AIR synthase related protein, N-terminal domain LIT25_01610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LIT25_01615 PF00814 Glycoprotease family LIT25_01620 PF00583 Acetyltransferase (GNAT) family LIT25_01625 PF00814 Glycoprotease family LIT25_01630 PF00005 ABC transporter LIT25_01630 PF16326 ABC transporter C-terminal domain LIT25_01630 PF12848 ABC transporter LIT25_01635 PF01967 MoaC family LIT25_01640 PF02629 CoA binding domain LIT25_01640 PF06971 Putative DNA-binding protein N-terminus LIT25_01645 PF02416 mttA/Hcf106 family LIT25_01650 PF00902 Sec-independent protein translocase protein (TatC) LIT25_01660 PF02517 CPBP intramembrane metalloprotease LIT25_01665 PF00166 Chaperonin 10 Kd subunit LIT25_01670 PF00118 TCP-1/cpn60 chaperonin family LIT25_01685 PF02796 Helix-turn-helix domain of resolvase LIT25_01685 PF00665 Integrase core domain LIT25_01700 PF01381 Helix-turn-helix LIT25_01700 PF07883 Cupin domain LIT25_01705 PF01810 LysE type translocator LIT25_01710 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIT25_01710 PF00753 Metallo-beta-lactamase superfamily LIT25_01740 PF13152 Protein of unknown function (DUF3967) LIT25_01740 PF13411 MerR HTH family regulatory protein LIT25_01745 PF00356 Bacterial regulatory proteins, lacI family LIT25_01750 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LIT25_01755 PF14310 Fibronectin type III-like domain LIT25_01755 PF00933 Glycosyl hydrolase family 3 N terminal domain LIT25_01755 PF01915 Glycosyl hydrolase family 3 C-terminal domain LIT25_01760 PF13416 Bacterial extracellular solute-binding protein LIT25_01770 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_01785 PF03992 Antibiotic biosynthesis monooxygenase LIT25_01800 PF01032 FecCD transport family LIT25_01805 PF01032 FecCD transport family LIT25_01810 PF01497 Periplasmic binding protein LIT25_01815 PF00005 ABC transporter LIT25_01820 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_01835 PF07726 ATPase family associated with various cellular activities (AAA) LIT25_01835 PF17863 AAA lid domain LIT25_01840 PF01882 Protein of unknown function DUF58 LIT25_01845 PF01841 Transglutaminase-like superfamily LIT25_01845 PF13559 Domain of unknown function (DUF4129) LIT25_01845 PF11992 Domain of unknown function (DUF3488) LIT25_01850 PF00958 GMP synthase C terminal domain LIT25_01850 PF02540 NAD synthase LIT25_01850 PF00117 Glutamine amidotransferase class-I LIT25_01855 PF00860 Permease family LIT25_01905 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_01910 PF14044 NETI protein LIT25_01915 PF00731 AIR carboxylase LIT25_01920 PF02222 ATP-grasp domain LIT25_01920 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LIT25_01925 PF00206 Lyase LIT25_01925 PF10397 Adenylosuccinate lyase C-terminus LIT25_01930 PF01259 SAICAR synthetase LIT25_01935 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LIT25_01945 PF02769 AIR synthase related protein, C-terminal domain LIT25_01945 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LIT25_01945 PF00586 AIR synthase related protein, N-terminal domain LIT25_01950 PF00156 Phosphoribosyl transferase domain LIT25_01955 PF02769 AIR synthase related protein, C-terminal domain LIT25_01955 PF00586 AIR synthase related protein, N-terminal domain LIT25_01960 PF00551 Formyl transferase LIT25_01965 PF01808 AICARFT/IMPCHase bienzyme LIT25_01965 PF02142 MGS-like domain LIT25_01970 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LIT25_01970 PF02843 Phosphoribosylglycinamide synthetase, C domain LIT25_01970 PF02844 Phosphoribosylglycinamide synthetase, N domain LIT25_01980 PF11127 Protein of unknown function (DUF2892) LIT25_01985 PF13382 Adenine deaminase C-terminal domain LIT25_01985 PF01979 Amidohydrolase family LIT25_01990 PF11258 Protein of unknown function (DUF3048) N-terminal domain LIT25_01990 PF17479 Protein of unknown function (DUF3048) C-terminal domain LIT25_01995 PF01371 Trp repressor protein LIT25_02010 PF01884 PcrB family LIT25_02015 PF00580 UvrD/REP helicase N-terminal domain LIT25_02015 PF13361 UvrD-like helicase C-terminal domain LIT25_02020 PF00533 BRCA1 C Terminus (BRCT) domain LIT25_02020 PF01653 NAD-dependent DNA ligase adenylation domain LIT25_02020 PF03120 NAD-dependent DNA ligase OB-fold domain LIT25_02020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LIT25_02020 PF12826 Helix-hairpin-helix motif LIT25_02025 PF07537 CamS sex pheromone cAM373 precursor LIT25_02030 PF00171 Aldehyde dehydrogenase family LIT25_02035 PF00474 Sodium:solute symporter family LIT25_02045 PF10509 Galactokinase galactose-binding signature LIT25_02045 PF08544 GHMP kinases C terminal LIT25_02045 PF00288 GHMP kinases N terminal domain LIT25_02050 PF16363 GDP-mannose 4,6 dehydratase LIT25_02055 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LIT25_02055 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LIT25_02060 PF01263 Aldose 1-epimerase LIT25_02065 PF00356 Bacterial regulatory proteins, lacI family LIT25_02080 PF02686 Glu-tRNAGln amidotransferase C subunit LIT25_02085 PF01425 Amidase LIT25_02090 PF02934 GatB/GatE catalytic domain LIT25_02090 PF02637 GatB domain LIT25_02095 PF00781 Diacylglycerol kinase catalytic domain LIT25_02100 PF01938 TRAM domain LIT25_02100 PF05958 tRNA (Uracil-5-)-methyltransferase LIT25_02120 PF07690 Major Facilitator Superfamily LIT25_02145 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_02180 PF01061 ABC-2 type transporter LIT25_02185 PF13732 Domain of unknown function (DUF4162) LIT25_02185 PF00005 ABC transporter LIT25_02210 PF00149 Calcineurin-like phosphoesterase LIT25_02225 PF07308 Protein of unknown function (DUF1456) LIT25_02235 PF04389 Peptidase family M28 LIT25_02240 PF02225 PA domain LIT25_02240 PF04389 Peptidase family M28 LIT25_02250 PF00082 Subtilase family LIT25_02250 PF05922 Peptidase inhibitor I9 LIT25_02265 PF00005 ABC transporter LIT25_02275 PF01596 O-methyltransferase LIT25_02305 PF10502 Signal peptidase, peptidase S26 LIT25_02320 PF00149 Calcineurin-like phosphoesterase LIT25_02320 PF02872 5'-nucleotidase, C-terminal domain LIT25_02325 PF02627 Carboxymuconolactone decarboxylase family LIT25_02330 PF04542 Sigma-70 region 2 LIT25_02330 PF12680 SnoaL-like domain LIT25_02330 PF08281 Sigma-70, region 4 LIT25_02335 PF00392 Bacterial regulatory proteins, gntR family LIT25_02335 PF00155 Aminotransferase class I and II LIT25_02340 PF01810 LysE type translocator LIT25_02345 PF14501 GHKL domain LIT25_02350 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT25_02350 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT25_02400 PF00741 Gas vesicle protein LIT25_02415 PF00741 Gas vesicle protein LIT25_02425 PF07728 AAA domain (dynein-related subfamily) LIT25_02445 PF00741 Gas vesicle protein LIT25_02450 PF05121 Gas vesicle protein K LIT25_02450 PF00741 Gas vesicle protein LIT25_02455 PF00741 Gas vesicle protein LIT25_02470 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein LIT25_02475 PF05816 Toxic anion resistance protein (TelA) LIT25_02485 PF08245 Mur ligase middle domain LIT25_02485 PF02875 Mur ligase family, glutamate ligase domain LIT25_02485 PF01225 Mur ligase family, catalytic domain LIT25_02490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT25_02490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT25_02495 PF12728 Helix-turn-helix domain LIT25_02500 PF16888 Domain of unknown function (DUF5082) LIT25_02510 PF04740 LXG domain of WXG superfamily LIT25_02510 PF14431 YwqJ-like deaminase LIT25_02510 PF14449 Pre-toxin TG LIT25_02515 PF07348 Syd protein (SUKH-2) LIT25_02570 PF00293 NUDIX domain LIT25_02575 PF00857 Isochorismatase family LIT25_02580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LIT25_02580 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LIT25_02580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LIT25_02585 PF01467 Cytidylyltransferase-like LIT25_02590 PF02540 NAD synthase LIT25_02595 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIT25_02595 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LIT25_02600 PF03401 Tripartite tricarboxylate transporter family receptor LIT25_02610 PF01970 Tripartite tricarboxylate transporter TctA family LIT25_02620 PF12431 Transcriptional regulator LIT25_02620 PF00072 Response regulator receiver domain LIT25_02630 PF14436 Bacterial EndoU nuclease LIT25_02630 PF04740 LXG domain of WXG superfamily LIT25_02650 PF06738 Putative threonine/serine exporter LIT25_02655 PF06738 Putative threonine/serine exporter LIT25_02655 PF12821 Threonine/Serine exporter, ThrE LIT25_02665 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_02670 PF01235 Sodium:alanine symporter family LIT25_02675 PF00005 ABC transporter LIT25_02675 PF00664 ABC transporter transmembrane region LIT25_02680 PF00005 ABC transporter LIT25_02680 PF00664 ABC transporter transmembrane region LIT25_02690 PF13458 Periplasmic binding protein LIT25_02695 PF02653 Branched-chain amino acid transport system / permease component LIT25_02700 PF02653 Branched-chain amino acid transport system / permease component LIT25_02700 PF11862 Domain of unknown function (DUF3382) LIT25_02705 PF00005 ABC transporter LIT25_02705 PF12399 Branched-chain amino acid ATP-binding cassette transporter LIT25_02710 PF00005 ABC transporter LIT25_02715 PF07690 Major Facilitator Superfamily LIT25_02720 PF04341 Protein of unknown function, DUF485 LIT25_02725 PF00474 Sodium:solute symporter family LIT25_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_02735 PF00512 His Kinase A (phospho-acceptor) domain LIT25_02740 PF02554 Carbon starvation protein CstA LIT25_02740 PF13722 5TM C-terminal transporter carbon starvation CstA LIT25_02760 PF04231 Endonuclease I LIT25_02765 PF03358 NADPH-dependent FMN reductase LIT25_02765 PF01566 Natural resistance-associated macrophage protein LIT25_02775 PF00005 ABC transporter LIT25_02775 PF12848 ABC transporter LIT25_02775 PF16326 ABC transporter C-terminal domain LIT25_02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_02800 PF00672 HAMP domain LIT25_02800 PF07730 Histidine kinase LIT25_02805 PF00072 Response regulator receiver domain LIT25_02805 PF00196 Bacterial regulatory proteins, luxR family LIT25_02810 PF07969 Amidohydrolase family LIT25_02815 PF07969 Amidohydrolase family LIT25_02830 PF08402 TOBE domain LIT25_02830 PF00005 ABC transporter LIT25_02835 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_02840 PF13419 Haloacid dehalogenase-like hydrolase LIT25_02845 PF00266 Aminotransferase class-V LIT25_02855 PF00455 DeoR C terminal sensor domain LIT25_02855 PF08220 DeoR-like helix-turn-helix domain LIT25_02870 PF00324 Amino acid permease LIT25_02880 PF03631 Virulence factor BrkB LIT25_02885 PF03372 Endonuclease/Exonuclease/phosphatase family LIT25_02890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT25_02890 PF00367 phosphotransferase system, EIIB LIT25_02890 PF02378 Phosphotransferase system, EIIC LIT25_02895 PF02898 Nitric oxide synthase, oxygenase domain LIT25_02900 PF00171 Aldehyde dehydrogenase family LIT25_02905 PF00202 Aminotransferase class-III LIT25_02910 PF00158 Sigma-54 interaction domain LIT25_02910 PF00072 Response regulator receiver domain LIT25_02910 PF02954 Bacterial regulatory protein, Fis family LIT25_02915 PF00158 Sigma-54 interaction domain LIT25_02915 PF13426 PAS domain LIT25_02915 PF02954 Bacterial regulatory protein, Fis family LIT25_02920 PF12544 Lysine-2,3-aminomutase LIT25_02940 PF00202 Aminotransferase class-III LIT25_02945 PF01144 Coenzyme A transferase LIT25_02950 PF01144 Coenzyme A transferase LIT25_02955 PF00108 Thiolase, N-terminal domain LIT25_02955 PF02803 Thiolase, C-terminal domain LIT25_02960 PF01546 Peptidase family M20/M25/M40 LIT25_02960 PF07687 Peptidase dimerisation domain LIT25_02965 PF00324 Amino acid permease LIT25_02980 PF00072 Response regulator receiver domain LIT25_02980 PF00196 Bacterial regulatory proteins, luxR family LIT25_02990 PF07690 Major Facilitator Superfamily LIT25_03005 PF09350 Domain of unknown function (DUF1992) LIT25_03010 PF03441 FAD binding domain of DNA photolyase LIT25_03010 PF00875 DNA photolyase LIT25_03030 PF02378 Phosphotransferase system, EIIC LIT25_03030 PF00367 phosphotransferase system, EIIB LIT25_03035 PF00128 Alpha amylase, catalytic domain LIT25_03035 PF16657 Maltogenic Amylase, C-terminal domain LIT25_03040 PF07702 UTRA domain LIT25_03040 PF00392 Bacterial regulatory proteins, gntR family LIT25_03070 PF12146 Serine aminopeptidase, S33 LIT25_03075 PF02872 5'-nucleotidase, C-terminal domain LIT25_03075 PF00149 Calcineurin-like phosphoesterase LIT25_03080 PF01965 DJ-1/PfpI family LIT25_03090 PF06569 Protein of unknown function (DUF1128) LIT25_03095 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT25_03105 PF03631 Virulence factor BrkB LIT25_03115 PF07690 Major Facilitator Superfamily LIT25_03120 PF16242 Pyridoxamine 5'-phosphate oxidase like LIT25_03125 PF01699 Sodium/calcium exchanger protein LIT25_03135 PF14167 YfkD-like protein LIT25_03145 PF04055 Radical SAM superfamily LIT25_03145 PF08756 YfkB-like domain LIT25_03155 PF05681 Fumarate hydratase (Fumerase) LIT25_03155 PF05683 Fumarase C-terminus LIT25_03160 PF01522 Polysaccharide deacetylase LIT25_03165 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT25_03170 PF01938 TRAM domain LIT25_03170 PF05958 tRNA (Uracil-5-)-methyltransferase LIT25_03175 PF00270 DEAD/DEAH box helicase LIT25_03175 PF00271 Helicase conserved C-terminal domain LIT25_03180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIT25_03180 PF18267 Rubredoxin NAD+ reductase C-terminal domain LIT25_03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_03180 PF04324 BFD-like [2Fe-2S] binding domain LIT25_03185 PF04324 BFD-like [2Fe-2S] binding domain LIT25_03185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIT25_03185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIT25_03185 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_03185 PF18267 Rubredoxin NAD+ reductase C-terminal domain LIT25_03190 PF14151 YfhD-like protein LIT25_03205 PF01979 Amidohydrolase family LIT25_03210 PF08338 Domain of unknown function (DUF1731) LIT25_03210 PF01370 NAD dependent epimerase/dehydratase family LIT25_03215 PF02631 RecX family LIT25_03220 PF00106 short chain dehydrogenase LIT25_03225 PF08838 Protein of unknown function (DUF1811) LIT25_03235 PF08176 Small acid-soluble spore protein K family LIT25_03240 PF14043 WVELL protein LIT25_03245 PF04307 LexA-binding, inner membrane-associated putative hydrolase LIT25_03250 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT25_03250 PF14815 NUDIX domain LIT25_03270 PF14182 YgaB-like protein LIT25_03275 PF04167 Protein of unknown function (DUF402) LIT25_03280 PF00664 ABC transporter transmembrane region LIT25_03280 PF00005 ABC transporter LIT25_03285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_03285 PF00005 ABC transporter LIT25_03290 PF00005 ABC transporter LIT25_03290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_03295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT25_03300 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03305 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT25_03305 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03310 PF07563 Protein of unknown function (DUF1541) LIT25_03320 PF06081 Aromatic acid exporter family member 1 LIT25_03325 PF01645 Conserved region in glutamate synthase LIT25_03325 PF01493 GXGXG motif LIT25_03325 PF00310 Glutamine amidotransferases class-II LIT25_03325 PF04898 Glutamate synthase central domain LIT25_03330 PF00202 Aminotransferase class-III LIT25_03340 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03345 PF07885 Ion channel LIT25_03350 PF00578 AhpC/TSA family LIT25_03355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT25_03355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT25_03360 PF01475 Ferric uptake regulator family LIT25_03365 PF11023 Zinc-ribbon containing domain LIT25_03370 PF14540 Nucleotidyltransferase-like LIT25_03370 PF18576 Helix-turn-helix domain LIT25_03495 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03500 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03505 PF01547 Bacterial extracellular solute-binding protein LIT25_03515 PF00672 HAMP domain LIT25_03515 PF06580 Histidine kinase LIT25_03515 PF02743 Cache domain LIT25_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_03520 PF00072 Response regulator receiver domain LIT25_03520 PF12833 Helix-turn-helix domain LIT25_03535 PF08331 Domain of unknown function (DUF1730) LIT25_03540 PF12671 Putative amidase domain LIT25_03545 PF00588 SpoU rRNA Methylase family LIT25_03550 PF08298 PrkA AAA domain LIT25_03550 PF06798 PrkA serine protein kinase C-terminal domain LIT25_03560 PF04285 Protein of unknown function (DUF444) LIT25_03565 PF01435 Peptidase family M48 LIT25_03580 PF04794 YdjC-like protein LIT25_03595 PF00512 His Kinase A (phospho-acceptor) domain LIT25_03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_03600 PF00486 Transcriptional regulatory protein, C terminal LIT25_03600 PF00072 Response regulator receiver domain LIT25_03605 PF02915 Rubrerythrin LIT25_03615 PF00589 Phage integrase family LIT25_03615 PF13495 Phage integrase, N-terminal SAM-like domain LIT25_03645 PF05922 Peptidase inhibitor I9 LIT25_03645 PF02225 PA domain LIT25_03645 PF00082 Subtilase family LIT25_03645 PF13860 FlgD Ig-like domain LIT25_03655 PF00356 Bacterial regulatory proteins, lacI family LIT25_03660 PF01547 Bacterial extracellular solute-binding protein LIT25_03665 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03670 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03680 PF00072 Response regulator receiver domain LIT25_03680 PF04703 FaeA-like protein LIT25_03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_03685 PF17203 Single cache domain 3 LIT25_03685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIT25_03690 PF03480 Bacterial extracellular solute-binding protein, family 7 LIT25_03695 PF00375 Sodium:dicarboxylate symporter family LIT25_03700 PF01865 Protein of unknown function DUF47 LIT25_03705 PF01384 Phosphate transporter family LIT25_03710 PF00881 Nitroreductase family LIT25_03715 PF02525 Flavodoxin-like fold LIT25_03725 PF07681 DoxX LIT25_03745 PF00005 ABC transporter LIT25_03750 PF00248 Aldo/keto reductase family LIT25_03755 PF04309 Glycerol-3-phosphate responsive antiterminator LIT25_03760 PF02416 mttA/Hcf106 family LIT25_03765 PF09423 PhoD-like phosphatase LIT25_03765 PF16655 PhoD-like phosphatase, N-terminal domain LIT25_03770 PF12787 EcsC protein family LIT25_03775 PF00248 Aldo/keto reductase family LIT25_03780 PF04203 Sortase domain LIT25_03785 PF00583 Acetyltransferase (GNAT) family LIT25_03790 PF00849 RNA pseudouridylate synthase LIT25_03790 PF01479 S4 domain LIT25_03795 PF17326 Family of unknown function (DUF5365) LIT25_03805 PF02600 Disulfide bond formation protein DsbB LIT25_03810 PF00571 CBS domain LIT25_03815 PF13419 Haloacid dehalogenase-like hydrolase LIT25_03820 PF00583 Acetyltransferase (GNAT) family LIT25_03820 PF00795 Carbon-nitrogen hydrolase LIT25_03825 PF04309 Glycerol-3-phosphate responsive antiterminator LIT25_03830 PF00230 Major intrinsic protein LIT25_03835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIT25_03835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIT25_03840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LIT25_03840 PF01266 FAD dependent oxidoreductase LIT25_03845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIT25_03845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIT25_03845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIT25_03845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIT25_03855 PF13185 GAF domain LIT25_03855 PF07730 Histidine kinase LIT25_03860 PF00196 Bacterial regulatory proteins, luxR family LIT25_03860 PF00072 Response regulator receiver domain LIT25_03865 PF03358 NADPH-dependent FMN reductase LIT25_03870 PF14148 YhdB-like protein LIT25_03875 PF04239 Protein of unknown function (DUF421) LIT25_03890 PF00294 pfkB family carbohydrate kinase LIT25_03895 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03900 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_03915 PF00356 Bacterial regulatory proteins, lacI family LIT25_03920 PF03747 ADP-ribosylglycohydrolase LIT25_03925 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT25_03930 PF00331 Glycosyl hydrolase family 10 LIT25_03930 PF00404 Dockerin type I domain LIT25_03930 PF03422 Carbohydrate binding module (family 6) LIT25_03930 PF00756 Putative esterase LIT25_03935 PF02082 Transcriptional regulator LIT25_03940 PF00042 Globin LIT25_03940 PF00175 Oxidoreductase NAD-binding domain LIT25_03940 PF00970 Oxidoreductase FAD-binding domain LIT25_03945 PF04293 SpoVR like protein LIT25_03960 PF02416 mttA/Hcf106 family LIT25_03980 PF01022 Bacterial regulatory protein, arsR family LIT25_03985 PF00403 Heavy-metal-associated domain LIT25_04025 PF13610 DDE domain LIT25_04030 PF01068 ATP dependent DNA ligase domain LIT25_04035 PF08818 Domain of unknown function (DU1801) LIT25_04045 PF01068 ATP dependent DNA ligase domain LIT25_04050 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIT25_04050 PF00753 Metallo-beta-lactamase superfamily LIT25_04055 PF13860 FlgD Ig-like domain LIT25_04055 PF05922 Peptidase inhibitor I9 LIT25_04055 PF02225 PA domain LIT25_04055 PF00082 Subtilase family LIT25_04060 PF02225 PA domain LIT25_04060 PF00082 Subtilase family LIT25_04060 PF06280 Fn3-like domain LIT25_04060 PF00746 LPXTG cell wall anchor motif LIT25_04065 PF00005 ABC transporter LIT25_04070 PF02311 AraC-like ligand binding domain LIT25_04070 PF12833 Helix-turn-helix domain LIT25_04075 PF01497 Periplasmic binding protein LIT25_04080 PF01032 FecCD transport family LIT25_04085 PF01032 FecCD transport family LIT25_04095 PF01022 Bacterial regulatory protein, arsR family LIT25_04100 PF02040 Arsenical pump membrane protein LIT25_04105 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT25_04115 PF05343 M42 glutamyl aminopeptidase LIT25_04120 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LIT25_04125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LIT25_04130 PF00486 Transcriptional regulatory protein, C terminal LIT25_04130 PF00072 Response regulator receiver domain LIT25_04135 PF00512 His Kinase A (phospho-acceptor) domain LIT25_04135 PF00989 PAS fold LIT25_04135 PF16736 Single Cache-like LIT25_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_04140 PF02630 SCO1/SenC LIT25_04150 PF13115 YtkA-like LIT25_04160 PF00753 Metallo-beta-lactamase superfamily LIT25_04160 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT25_04160 PF17770 Ribonuclease J C-terminal domain LIT25_04170 PF01619 Proline dehydrogenase LIT25_04175 PF00171 Aldehyde dehydrogenase family LIT25_04180 PF00474 Sodium:solute symporter family LIT25_04185 PF13556 PucR C-terminal helix-turn-helix domain LIT25_04185 PF17853 GGDEF-like domain LIT25_04190 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LIT25_04195 PF06803 Protein of unknown function (DUF1232) LIT25_04205 PF04298 Putative neutral zinc metallopeptidase LIT25_04210 PF01979 Amidohydrolase family LIT25_04220 PF13426 PAS domain LIT25_04220 PF00158 Sigma-54 interaction domain LIT25_04220 PF02954 Bacterial regulatory protein, Fis family LIT25_04225 PF00171 Aldehyde dehydrogenase family LIT25_04230 PF00202 Aminotransferase class-III LIT25_04235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIT25_04235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIT25_04240 PF01569 PAP2 superfamily LIT25_04245 PF03631 Virulence factor BrkB LIT25_04250 PF02559 CarD-like/TRCF domain LIT25_04255 PF01022 Bacterial regulatory protein, arsR family LIT25_04260 PF00860 Permease family LIT25_04265 PF03466 LysR substrate binding domain LIT25_04265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT25_04270 PF13302 Acetyltransferase (GNAT) domain LIT25_04275 PF13115 YtkA-like LIT25_04290 PF12867 DinB superfamily LIT25_04305 PF01594 AI-2E family transporter LIT25_04315 PF03471 Transporter associated domain LIT25_04315 PF02080 TrkA-C domain LIT25_04315 PF00999 Sodium/hydrogen exchanger family LIT25_04320 PF11871 Domain of unknown function (DUF3391) LIT25_04320 PF01966 HD domain LIT25_04340 PF02566 OsmC-like protein LIT25_04355 PF00924 Mechanosensitive ion channel LIT25_04360 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT25_04360 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT25_04365 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_04365 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_04370 PF17444 Uncharacterized YhdX-like LIT25_04380 PF00268 Ribonucleotide reductase, small chain LIT25_04385 PF00317 Ribonucleotide reductase, all-alpha domain LIT25_04385 PF02867 Ribonucleotide reductase, barrel domain LIT25_04385 PF03477 ATP cone domain LIT25_04390 PF01063 Amino-transferase class IV LIT25_04400 PF03553 Na+/H+ antiporter family LIT25_04410 PF00582 Universal stress protein family LIT25_04415 PF00912 Transglycosylase LIT25_04415 PF00905 Penicillin binding protein transpeptidase domain LIT25_04430 PF00005 ABC transporter LIT25_04430 PF00664 ABC transporter transmembrane region LIT25_04435 PF00005 ABC transporter LIT25_04435 PF00664 ABC transporter transmembrane region LIT25_04440 PF13460 NAD(P)H-binding LIT25_04445 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT25_04450 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_04455 PF00005 ABC transporter LIT25_04465 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT25_04475 PF17912 MalK OB fold domain LIT25_04475 PF00005 ABC transporter LIT25_04475 PF03459 TOBE domain LIT25_04480 PF13556 PucR C-terminal helix-turn-helix domain LIT25_04490 PF17277 Family of unknown function (DUF5342) LIT25_04500 PF14398 YheC/D like ATP-grasp LIT25_04505 PF14398 YheC/D like ATP-grasp LIT25_04510 PF04286 Protein of unknown function (DUF445) LIT25_04515 PF06133 Control of competence regulator ComK, YlbF/YmcA LIT25_04540 PF04055 Radical SAM superfamily LIT25_04545 PF01264 Chorismate synthase LIT25_04590 PF00501 AMP-binding enzyme LIT25_04590 PF14535 AMP-binding enzyme C-terminal domain LIT25_04600 PF01817 Chorismate mutase type II LIT25_04600 PF00793 DAHP synthetase I family LIT25_04635 PF00501 AMP-binding enzyme LIT25_04635 PF13193 AMP-binding enzyme C-terminal domain LIT25_04640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_04640 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_04640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_04645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT25_04645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT25_04650 PF02803 Thiolase, C-terminal domain LIT25_04650 PF00108 Thiolase, N-terminal domain LIT25_04655 PF00378 Enoyl-CoA hydratase/isomerase LIT25_04665 PF13732 Domain of unknown function (DUF4162) LIT25_04665 PF00005 ABC transporter LIT25_04675 PF00149 Calcineurin-like phosphoesterase LIT25_04680 PF13514 AAA domain LIT25_04685 PF07690 Major Facilitator Superfamily LIT25_04690 PF01966 HD domain LIT25_04695 PF14147 Sporulation protein YhaL LIT25_04700 PF05698 Bacterial trigger factor protein (TF) C-terminus LIT25_04705 PF09680 Family of unknown function LIT25_04710 PF09680 Family of unknown function LIT25_04720 PF11667 Putative zincin peptidase LIT25_04725 PF08963 Protein of unknown function (DUF1878) LIT25_04730 PF01047 MarR family LIT25_04735 PF12732 YtxH-like protein LIT25_04745 PF17099 Tryptophan transporter TrpP LIT25_04750 PF00266 Aminotransferase class-V LIT25_04755 PF01230 HIT domain LIT25_04760 PF00005 ABC transporter LIT25_04765 PF05975 Bacterial ABC transporter protein EcsB LIT25_04770 PF12787 EcsC protein family LIT25_04775 PF07687 Peptidase dimerisation domain LIT25_04775 PF01546 Peptidase family M20/M25/M40 LIT25_04790 PF03992 Antibiotic biosynthesis monooxygenase LIT25_04795 PF00905 Penicillin binding protein transpeptidase domain LIT25_04795 PF00912 Transglycosylase LIT25_04800 PF01208 Uroporphyrinogen decarboxylase (URO-D) LIT25_04805 PF00762 Ferrochelatase LIT25_04810 PF01593 Flavin containing amine oxidoreductase LIT25_04815 PF17932 Tetracyclin repressor-like, C-terminal domain LIT25_04815 PF00440 Bacterial regulatory proteins, tetR family LIT25_04825 PF00356 Bacterial regulatory proteins, lacI family LIT25_04835 PF14149 YhfH-like protein LIT25_04840 PF12706 Beta-lactamase superfamily domain LIT25_04845 PF03099 Biotin/lipoate A/B protein ligase family LIT25_04845 PF10437 Bacterial lipoate protein ligase C-terminus LIT25_04850 PF13193 AMP-binding enzyme C-terminal domain LIT25_04850 PF00501 AMP-binding enzyme LIT25_04855 PF00378 Enoyl-CoA hydratase/isomerase LIT25_04865 PF07883 Cupin domain LIT25_04865 PF01381 Helix-turn-helix LIT25_04870 PF03591 AzlC protein LIT25_04880 PF01435 Peptidase family M48 LIT25_04880 PF16491 CAAX prenyl protease N-terminal, five membrane helices LIT25_04885 PF00463 Isocitrate lyase family LIT25_04890 PF08858 IDEAL domain LIT25_04895 PF01074 Glycosyl hydrolases family 38 N-terminal domain LIT25_04895 PF07748 Glycosyl hydrolases family 38 C-terminal domain LIT25_04895 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain LIT25_04895 PF09261 Alpha mannosidase middle domain LIT25_04895 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 LIT25_04910 PF04854 Protein of unknown function, DUF624 LIT25_04920 PF06580 Histidine kinase LIT25_04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_04920 PF00672 HAMP domain LIT25_04920 PF02743 Cache domain LIT25_04925 PF00072 Response regulator receiver domain LIT25_04925 PF12833 Helix-turn-helix domain LIT25_04930 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_04935 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_04940 PF12010 Domain of unknown function (DUF3502) LIT25_04945 PF00232 Glycosyl hydrolase family 1 LIT25_04950 PF00480 ROK family LIT25_04965 PF00356 Bacterial regulatory proteins, lacI family LIT25_04970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_04970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_04975 PF00294 pfkB family carbohydrate kinase LIT25_04980 PF00171 Aldehyde dehydrogenase family LIT25_04985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT25_04985 PF00205 Thiamine pyrophosphate enzyme, central domain LIT25_04985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT25_04990 PF01261 Xylose isomerase-like TIM barrel LIT25_04995 PF04962 KduI/IolB family LIT25_05000 PF07690 Major Facilitator Superfamily LIT25_05040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIT25_05065 PF09335 SNARE associated Golgi protein LIT25_05070 PF10502 Signal peptidase, peptidase S26 LIT25_05080 PF12705 PD-(D/E)XK nuclease superfamily LIT25_05085 PF13361 UvrD-like helicase C-terminal domain LIT25_05085 PF00580 UvrD/REP helicase N-terminal domain LIT25_05085 PF12705 PD-(D/E)XK nuclease superfamily LIT25_05090 PF12320 Type 5 capsule protein repressor C-terminal domain LIT25_05090 PF00149 Calcineurin-like phosphoesterase LIT25_05095 PF13476 AAA domain LIT25_05105 PF10676 Spore germination protein gerPA/gerPF LIT25_05110 PF10970 Spore germination protein GerPE LIT25_05120 PF10737 Spore germination protein GerPC LIT25_05125 PF10803 Spore germination GerPB LIT25_05130 PF10676 Spore germination protein gerPA/gerPF LIT25_05135 PF01751 Toprim domain LIT25_05135 PF01131 DNA topoisomerase LIT25_05145 PF04235 Protein of unknown function (DUF418) LIT25_05150 PF09388 Spo0E like sporulation regulatory protein LIT25_05155 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT25_05160 PF00202 Aminotransferase class-III LIT25_05165 PF07457 Protein of unknown function (DUF1516) LIT25_05175 PF13537 Glutamine amidotransferase domain LIT25_05175 PF00733 Asparagine synthase LIT25_05180 PF03180 NLPA lipoprotein LIT25_05185 PF00909 Ammonium Transporter Family LIT25_05190 PF01554 MatE LIT25_05195 PF02311 AraC-like ligand binding domain LIT25_05195 PF12833 Helix-turn-helix domain LIT25_05205 PF00324 Amino acid permease LIT25_05210 PF00128 Alpha amylase, catalytic domain LIT25_05210 PF16657 Maltogenic Amylase, C-terminal domain LIT25_05210 PF02903 Alpha amylase, N-terminal ig-like domain LIT25_05215 PF13416 Bacterial extracellular solute-binding protein LIT25_05220 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_05225 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_05230 PF01373 Glycosyl hydrolase family 14 LIT25_05230 PF03423 Carbohydrate binding domain (family 25) LIT25_05230 PF00128 Alpha amylase, catalytic domain LIT25_05235 PF00356 Bacterial regulatory proteins, lacI family LIT25_05260 PF01368 DHH family LIT25_05260 PF02833 DHHA2 domain LIT25_05280 PF02310 B12 binding domain LIT25_05280 PF02607 B12 binding domain LIT25_05280 PF02965 Vitamin B12 dependent methionine synthase, activation domain LIT25_05280 PF00809 Pterin binding enzyme LIT25_05280 PF02574 Homocysteine S-methyltransferase LIT25_05285 PF02219 Methylenetetrahydrofolate reductase LIT25_05285 PF02574 Homocysteine S-methyltransferase LIT25_05290 PF04461 Protein of unknown function (DUF520) LIT25_05295 PF17783 CvfB-like winged helix domain LIT25_05295 PF13509 S1 domain LIT25_05305 PF02645 Uncharacterised protein, DegV family COG1307 LIT25_05310 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_05310 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_05315 PF12690 Intracellular proteinase inhibitor LIT25_05335 PF00326 Prolyl oligopeptidase family LIT25_05340 PF01883 Iron-sulfur cluster assembly protein LIT25_05345 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIT25_05345 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIT25_05350 PF01960 ArgJ family LIT25_05355 PF00696 Amino acid kinase family LIT25_05360 PF00202 Aminotransferase class-III LIT25_05365 PF00117 Glutamine amidotransferase class-I LIT25_05365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LIT25_05370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT25_05370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LIT25_05375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIT25_05375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIT25_05380 PF14168 YjzC-like protein LIT25_05400 PF02608 ABC transporter substrate-binding protein PnrA-like LIT25_05405 PF10815 ComZ LIT25_05410 PF03193 RsgA GTPase LIT25_05420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIT25_05420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIT25_05425 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT25_05425 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT25_05430 PF10026 Predicted Zn-dependent protease (DUF2268) LIT25_05435 PF00005 ABC transporter LIT25_05435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_05440 PF00005 ABC transporter LIT25_05440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_05445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT25_05450 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_05455 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_05455 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT25_05465 PF12227 Protein of unknown function (DUF3603) LIT25_05475 PF00579 tRNA synthetases class I (W and Y) LIT25_05485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT25_05490 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_05495 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT25_05495 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_05500 PF00005 ABC transporter LIT25_05500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_05505 PF00005 ABC transporter LIT25_05505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_05520 PF13508 Acetyltransferase (GNAT) domain LIT25_05525 PF03960 ArsC family LIT25_05530 PF03741 Integral membrane protein TerC family LIT25_05535 PF05389 Negative regulator of genetic competence (MecA) LIT25_05540 PF13091 PLD-like domain LIT25_05540 PF13396 Phospholipase_D-nuclease N-terminal LIT25_05545 PF06054 Competence protein CoiA-like family LIT25_05555 PF01432 Peptidase family M3 LIT25_05555 PF08439 Oligopeptidase F LIT25_05570 PF01152 Bacterial-like globin LIT25_05575 PF01464 Transglycosylase SLT domain LIT25_05580 PF01928 CYTH domain LIT25_05590 PF04607 Region found in RelA / SpoT proteins LIT25_05595 PF01513 ATP-NAD kinase LIT25_05600 PF00849 RNA pseudouridylate synthase LIT25_05605 PF00149 Calcineurin-like phosphoesterase LIT25_05610 PF01098 Cell cycle protein LIT25_05615 PF01769 Divalent cation transporter LIT25_05615 PF03448 MgtE intracellular N domain LIT25_05615 PF00571 CBS domain LIT25_05620 PF00999 Sodium/hydrogen exchanger family LIT25_05620 PF02080 TrkA-C domain LIT25_05620 PF02254 TrkA-N domain LIT25_05625 PF03070 TENA/THI-4/PQQC family LIT25_05630 PF02581 Thiamine monophosphate synthase LIT25_05635 PF01266 FAD dependent oxidoreductase LIT25_05645 PF05690 Thiazole biosynthesis protein ThiG LIT25_05650 PF00899 ThiF family LIT25_05655 PF04286 Protein of unknown function (DUF445) LIT25_05685 PF05067 Manganese containing catalase LIT25_05690 PF12652 CotJB protein LIT25_05695 PF11007 Spore coat associated protein JA (CotJA) LIT25_05700 PF01636 Phosphotransferase enzyme family LIT25_05705 PF00534 Glycosyl transferases group 1 LIT25_05705 PF13439 Glycosyltransferase Family 4 LIT25_05720 PF00534 Glycosyl transferases group 1 LIT25_05720 PF13439 Glycosyltransferase Family 4 LIT25_05725 PF01370 NAD dependent epimerase/dehydratase family LIT25_05730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT25_05730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT25_05730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT25_05735 PF00534 Glycosyl transferases group 1 LIT25_05735 PF13439 Glycosyltransferase Family 4 LIT25_05750 PF07098 Protein of unknown function (DUF1360) LIT25_05785 PF14069 Stage VI sporulation protein F LIT25_05790 PF00580 UvrD/REP helicase N-terminal domain LIT25_05790 PF13361 UvrD-like helicase C-terminal domain LIT25_05805 PF04239 Protein of unknown function (DUF421) LIT25_05810 PF13673 Acetyltransferase (GNAT) domain LIT25_05820 PF00756 Putative esterase LIT25_05830 PF00892 EamA-like transporter family LIT25_05835 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT25_05840 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT25_05850 PF10787 Uncharacterised protein from bacillus cereus group LIT25_05875 PF01872 RibD C-terminal domain LIT25_05880 PF02311 AraC-like ligand binding domain LIT25_05880 PF12833 Helix-turn-helix domain LIT25_05890 PF00474 Sodium:solute symporter family LIT25_05895 PF14158 YndJ-like protein LIT25_05900 PF13761 Domain of unknown function (DUF4166) LIT25_05910 PF00300 Histidine phosphatase superfamily (branch 1) LIT25_05915 PF06445 GyrI-like small molecule binding domain LIT25_05915 PF12833 Helix-turn-helix domain LIT25_05925 PF06445 GyrI-like small molecule binding domain LIT25_05925 PF12833 Helix-turn-helix domain LIT25_05930 PF09335 SNARE associated Golgi protein LIT25_05940 PF00501 AMP-binding enzyme LIT25_05940 PF13193 AMP-binding enzyme C-terminal domain LIT25_05955 PF00293 NUDIX domain LIT25_05960 PF01098 Cell cycle protein LIT25_05965 PF00892 EamA-like transporter family LIT25_05980 PF08281 Sigma-70, region 4 LIT25_05980 PF04542 Sigma-70 region 2 LIT25_05990 PF05675 Protein of unknown function (DUF817) LIT25_05995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_06005 PF05163 DinB family LIT25_06010 PF00487 Fatty acid desaturase LIT25_06015 PF07730 Histidine kinase LIT25_06020 PF00196 Bacterial regulatory proteins, luxR family LIT25_06020 PF00072 Response regulator receiver domain LIT25_06065 PF07690 Major Facilitator Superfamily LIT25_06080 PF12146 Serine aminopeptidase, S33 LIT25_06085 PF07690 Major Facilitator Superfamily LIT25_06105 PF00005 ABC transporter LIT25_06115 PF13145 PPIC-type PPIASE domain LIT25_06125 PF03061 Thioesterase superfamily LIT25_06140 PF13520 Amino acid permease LIT25_06145 PF01047 MarR family LIT25_06150 PF03176 MMPL family LIT25_06155 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_06165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_06175 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_06175 PF00107 Zinc-binding dehydrogenase LIT25_06185 PF00149 Calcineurin-like phosphoesterase LIT25_06205 PF12697 Alpha/beta hydrolase family LIT25_06210 PF01980 tRNA-methyltransferase O LIT25_06215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_06225 PF01022 Bacterial regulatory protein, arsR family LIT25_06235 PF09992 Phosphodiester glycosidase LIT25_06235 PF12708 Pectate lyase superfamily protein LIT25_06240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_06245 PF07687 Peptidase dimerisation domain LIT25_06245 PF01546 Peptidase family M20/M25/M40 LIT25_06250 PF03553 Na+/H+ antiporter family LIT25_06260 PF13378 Enolase C-terminal domain-like LIT25_06260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT25_06280 PF01709 Transcriptional regulator LIT25_06285 PF03949 Malic enzyme, NAD binding domain LIT25_06285 PF00390 Malic enzyme, N-terminal domain LIT25_06290 PF10415 Fumarase C C-terminus LIT25_06290 PF00206 Lyase LIT25_06295 PF00375 Sodium:dicarboxylate symporter family LIT25_06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_06305 PF00072 Response regulator receiver domain LIT25_06305 PF08664 YcbB domain LIT25_06310 PF01842 ACT domain LIT25_06310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT25_06310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT25_06315 PF00072 Response regulator receiver domain LIT25_06315 PF00486 Transcriptional regulatory protein, C terminal LIT25_06350 PF03741 Integral membrane protein TerC family LIT25_06365 PF00005 ABC transporter LIT25_06370 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT25_06375 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_06380 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_06390 PF03323 Bacillus/Clostridium GerA spore germination protein LIT25_06405 PF07875 Coat F domain LIT25_06425 PF08327 Activator of Hsp90 ATPase homolog 1-like protein LIT25_06430 PF16868 NMT1-like family LIT25_06475 PF13860 FlgD Ig-like domain LIT25_06475 PF05922 Peptidase inhibitor I9 LIT25_06475 PF02225 PA domain LIT25_06475 PF00082 Subtilase family LIT25_06495 PF00403 Heavy-metal-associated domain LIT25_06500 PF00403 Heavy-metal-associated domain LIT25_06550 PF00155 Aminotransferase class I and II LIT25_06555 PF03932 CutC family LIT25_06560 PF00902 Sec-independent protein translocase protein (TatC) LIT25_06565 PF02416 mttA/Hcf106 family LIT25_06575 PF00455 DeoR C terminal sensor domain LIT25_06575 PF08220 DeoR-like helix-turn-helix domain LIT25_06585 PF00356 Bacterial regulatory proteins, lacI family LIT25_06590 PF02614 Glucuronate isomerase LIT25_06595 PF03786 D-mannonate dehydratase (UxuA) LIT25_06600 PF00106 short chain dehydrogenase LIT25_06605 PF02016 LD-carboxypeptidase N-terminal domain LIT25_06605 PF17676 LD-carboxypeptidase C-terminal domain LIT25_06615 PF02602 Uroporphyrinogen-III synthase HemD LIT25_06620 PF01472 PUA domain LIT25_06620 PF00696 Amino acid kinase family LIT25_06625 PF00171 Aldehyde dehydrogenase family LIT25_06640 PF00483 Nucleotidyl transferase LIT25_06645 PF16363 GDP-mannose 4,6 dehydratase LIT25_06650 PF04321 RmlD substrate binding domain LIT25_06655 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LIT25_06660 PF00535 Glycosyl transferase family 2 LIT25_06670 PF02719 Polysaccharide biosynthesis protein LIT25_06675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LIT25_06680 PF03102 NeuB family LIT25_06680 PF08666 SAF domain LIT25_06685 PF02350 UDP-N-acetylglucosamine 2-epimerase LIT25_06690 PF02348 Cytidylyltransferase LIT25_06690 PF13472 GDSL-like Lipase/Acylhydrolase family LIT25_06735 PF00535 Glycosyl transferase family 2 LIT25_06755 PF01638 HxlR-like helix-turn-helix LIT25_06760 PF07690 Major Facilitator Superfamily LIT25_06765 PF00248 Aldo/keto reductase family LIT25_06790 PF00873 AcrB/AcrD/AcrF family LIT25_06795 PF06906 Protein of unknown function (DUF1272) LIT25_06815 PF01368 DHH family LIT25_06815 PF02272 DHHA1 domain LIT25_06820 PF04480 Protein of unknown function (DUF559) LIT25_06820 PF03852 DNA mismatch endonuclease Vsr LIT25_06825 PF00145 C-5 cytosine-specific DNA methylase LIT25_06835 PF02976 DNA mismatch repair enzyme MutH LIT25_06860 PF13302 Acetyltransferase (GNAT) domain LIT25_06890 PF04740 LXG domain of WXG superfamily LIT25_06900 PF04740 LXG domain of WXG superfamily LIT25_06900 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH LIT25_06915 PF07690 Major Facilitator Superfamily LIT25_06925 PF00324 Amino acid permease LIT25_06935 PF03358 NADPH-dependent FMN reductase LIT25_06940 PF00753 Metallo-beta-lactamase superfamily LIT25_06940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT25_06940 PF17770 Ribonuclease J C-terminal domain LIT25_06955 PF08892 YqcI/YcgG family LIT25_06960 PF01810 LysE type translocator LIT25_06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT25_06970 PF03466 LysR substrate binding domain LIT25_06975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_06990 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_06995 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07005 PF01261 Xylose isomerase-like TIM barrel LIT25_07010 PF07702 UTRA domain LIT25_07010 PF00392 Bacterial regulatory proteins, gntR family LIT25_07020 PF00005 ABC transporter LIT25_07025 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07030 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07045 PF05861 Bacterial phosphonate metabolism protein (PhnI) LIT25_07050 PF06007 Phosphonate metabolism protein PhnJ LIT25_07055 PF00005 ABC transporter LIT25_07060 PF07969 Amidohydrolase family LIT25_07065 PF00132 Bacterial transferase hexapeptide (six repeats) LIT25_07070 PF00005 ABC transporter LIT25_07075 PF02811 PHP domain LIT25_07080 PF00440 Bacterial regulatory proteins, tetR family LIT25_07085 PF00501 AMP-binding enzyme LIT25_07085 PF13193 AMP-binding enzyme C-terminal domain LIT25_07090 PF00083 Sugar (and other) transporter LIT25_07090 PF07690 Major Facilitator Superfamily LIT25_07100 PF00574 Clp protease LIT25_07120 PF13302 Acetyltransferase (GNAT) domain LIT25_07135 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIT25_07135 PF18277 AbrB C-terminal domain LIT25_07145 PF13333 Integrase core domain LIT25_07145 PF00665 Integrase core domain LIT25_07145 PF13276 HTH-like domain LIT25_07150 PF06508 Queuosine biosynthesis protein QueC LIT25_07165 PF00067 Cytochrome P450 LIT25_07210 PF13860 FlgD Ig-like domain LIT25_07210 PF05922 Peptidase inhibitor I9 LIT25_07210 PF02225 PA domain LIT25_07210 PF00082 Subtilase family LIT25_07225 PF01526 Tn3 transposase DDE domain LIT25_07225 PF13700 Domain of unknown function (DUF4158) LIT25_07235 PF04542 Sigma-70 region 2 LIT25_07235 PF08281 Sigma-70, region 4 LIT25_07280 PF00005 ABC transporter LIT25_07285 PF12679 ABC-2 family transporter protein LIT25_07290 PF01740 STAS domain LIT25_07310 PF00296 Luciferase-like monooxygenase LIT25_07315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIT25_07320 PF10282 Lactonase, 7-bladed beta-propeller LIT25_07325 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT25_07330 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07335 PF00005 ABC transporter LIT25_07340 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LIT25_07340 PF01740 STAS domain LIT25_07345 PF13039 Protein of unknown function (DUF3900) LIT25_07345 PF13037 Domain of unknown function (DUF3898) LIT25_07350 PF04238 Protein of unknown function (DUF420) LIT25_07360 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LIT25_07360 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT25_07365 PF08281 Sigma-70, region 4 LIT25_07365 PF04542 Sigma-70 region 2 LIT25_07375 PF04951 D-aminopeptidase LIT25_07380 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07385 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07385 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT25_07390 PF00005 ABC transporter LIT25_07390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_07395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT25_07400 PF02016 LD-carboxypeptidase N-terminal domain LIT25_07400 PF17676 LD-carboxypeptidase C-terminal domain LIT25_07405 PF13378 Enolase C-terminal domain-like LIT25_07405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT25_07410 PF00877 NlpC/P60 family LIT25_07415 PF00005 ABC transporter LIT25_07415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_07445 PF00486 Transcriptional regulatory protein, C terminal LIT25_07445 PF00072 Response regulator receiver domain LIT25_07450 PF12796 Ankyrin repeats (3 copies) LIT25_07470 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIT25_07470 PF18277 AbrB C-terminal domain LIT25_07480 PF01476 LysM domain LIT25_07480 PF03734 L,D-transpeptidase catalytic domain LIT25_07490 PF13333 Integrase core domain LIT25_07490 PF00665 Integrase core domain LIT25_07490 PF13276 HTH-like domain LIT25_07525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LIT25_07525 PF18277 AbrB C-terminal domain LIT25_07535 PF01609 Transposase DDE domain LIT25_07540 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_07555 PF16655 PhoD-like phosphatase, N-terminal domain LIT25_07555 PF09423 PhoD-like phosphatase LIT25_07560 PF08402 TOBE domain LIT25_07560 PF00005 ABC transporter LIT25_07565 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07570 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07580 PF14716 Helix-hairpin-helix domain LIT25_07580 PF14791 DNA polymerase beta thumb LIT25_07580 PF02811 PHP domain LIT25_07590 PF00455 DeoR C terminal sensor domain LIT25_07590 PF08220 DeoR-like helix-turn-helix domain LIT25_07600 PF09423 PhoD-like phosphatase LIT25_07600 PF16655 PhoD-like phosphatase, N-terminal domain LIT25_07630 PF13333 Integrase core domain LIT25_07630 PF00665 Integrase core domain LIT25_07660 PF00005 ABC transporter LIT25_07665 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07740 PF01593 Flavin containing amine oxidoreductase LIT25_07745 PF00082 Subtilase family LIT25_07745 PF02225 PA domain LIT25_07745 PF05922 Peptidase inhibitor I9 LIT25_07745 PF13860 FlgD Ig-like domain LIT25_07780 PF01471 Putative peptidoglycan binding domain LIT25_07780 PF07486 Cell Wall Hydrolase LIT25_07785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT25_07785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT25_07785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT25_07790 PF00483 Nucleotidyl transferase LIT25_07795 PF00535 Glycosyl transferase family 2 LIT25_07800 PF00005 ABC transporter LIT25_07805 PF12704 MacB-like periplasmic core domain LIT25_07805 PF02687 FtsX-like permease family LIT25_07810 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT25_07820 PF13229 Right handed beta helix region LIT25_07820 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LIT25_07820 PF12708 Pectate lyase superfamily protein LIT25_07825 PF02278 Polysaccharide lyase family 8, super-sandwich domain LIT25_07825 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain LIT25_07825 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain LIT25_07835 PF12697 Alpha/beta hydrolase family LIT25_07860 PF00989 PAS fold LIT25_07860 PF08447 PAS fold LIT25_07860 PF00512 His Kinase A (phospho-acceptor) domain LIT25_07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_07870 PF00356 Bacterial regulatory proteins, lacI family LIT25_07875 PF16657 Maltogenic Amylase, C-terminal domain LIT25_07875 PF02903 Alpha amylase, N-terminal ig-like domain LIT25_07875 PF00128 Alpha amylase, catalytic domain LIT25_07880 PF05343 M42 glutamyl aminopeptidase LIT25_07885 PF17936 Bacterial Ig domain LIT25_07885 PF00082 Subtilase family LIT25_07900 PF00005 ABC transporter LIT25_07900 PF00571 CBS domain LIT25_07905 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT25_07910 PF00874 PRD domain LIT25_07910 PF05043 Mga helix-turn-helix domain LIT25_07910 PF08279 HTH domain LIT25_07915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT25_07915 PF02378 Phosphotransferase system, EIIC LIT25_07915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT25_07920 PF01238 Phosphomannose isomerase type I LIT25_07930 PF08141 Small acid-soluble spore protein H family LIT25_07955 PF01734 Patatin-like phospholipase LIT25_07965 PF07662 Na+ dependent nucleoside transporter C-terminus LIT25_07965 PF01773 Na+ dependent nucleoside transporter N-terminus LIT25_07975 PF00005 ABC transporter LIT25_07980 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_07985 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT25_08000 PF16242 Pyridoxamine 5'-phosphate oxidase like LIT25_08005 PF01565 FAD binding domain LIT25_08010 PF07690 Major Facilitator Superfamily LIT25_08030 PF02378 Phosphotransferase system, EIIC LIT25_08030 PF00367 phosphotransferase system, EIIB LIT25_08035 PF01979 Amidohydrolase family LIT25_08040 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LIT25_08045 PF00392 Bacterial regulatory proteins, gntR family LIT25_08045 PF07702 UTRA domain LIT25_08050 PF01380 SIS domain LIT25_08060 PF00313 'Cold-shock' DNA-binding domain LIT25_08065 PF08274 PhnA Zinc-Ribbon LIT25_08065 PF03831 PhnA domain LIT25_08070 PF00355 Rieske [2Fe-2S] domain LIT25_08070 PF01266 FAD dependent oxidoreductase LIT25_08075 PF00005 ABC transporter LIT25_08075 PF16326 ABC transporter C-terminal domain LIT25_08075 PF12848 ABC transporter LIT25_08085 PF00005 ABC transporter LIT25_08085 PF09383 NIL domain LIT25_08090 PF02653 Branched-chain amino acid transport system / permease component LIT25_08125 PF00082 Subtilase family LIT25_08145 PF02342 TerD domain LIT25_08150 PF10138 vWA found in TerF C terminus LIT25_08155 PF01380 SIS domain LIT25_08160 PF01380 SIS domain LIT25_08160 PF01418 Helix-turn-helix domain, rpiR family LIT25_08165 PF02378 Phosphotransferase system, EIIC LIT25_08165 PF00367 phosphotransferase system, EIIB LIT25_08175 PF00144 Beta-lactamase LIT25_08180 PF00933 Glycosyl hydrolase family 3 N terminal domain LIT25_08180 PF01915 Glycosyl hydrolase family 3 C-terminal domain LIT25_08195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_08195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_08205 PF01740 STAS domain LIT25_08205 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain LIT25_08210 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_08215 PF00072 Response regulator receiver domain LIT25_08215 PF00486 Transcriptional regulatory protein, C terminal LIT25_08220 PF00672 HAMP domain LIT25_08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_08220 PF00512 His Kinase A (phospho-acceptor) domain LIT25_08225 PF03413 Peptidase propeptide and YPEB domain LIT25_08240 PF15975 Flotillin LIT25_08240 PF01145 SPFH domain / Band 7 family LIT25_08250 PF05651 Putative sugar diacid recognition LIT25_08250 PF17853 GGDEF-like domain LIT25_08250 PF13556 PucR C-terminal helix-turn-helix domain LIT25_08270 PF02595 Glycerate kinase family LIT25_08280 PF00486 Transcriptional regulatory protein, C terminal LIT25_08280 PF00072 Response regulator receiver domain LIT25_08285 PF00512 His Kinase A (phospho-acceptor) domain LIT25_08285 PF00672 HAMP domain LIT25_08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_08290 PF00005 ABC transporter LIT25_08315 PF08281 Sigma-70, region 4 LIT25_08315 PF04542 Sigma-70 region 2 LIT25_08320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_08320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_08325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_08325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_08330 PF01261 Xylose isomerase-like TIM barrel LIT25_08340 PF00356 Bacterial regulatory proteins, lacI family LIT25_08365 PF01047 MarR family LIT25_08370 PF02566 OsmC-like protein LIT25_08380 PF05922 Peptidase inhibitor I9 LIT25_08380 PF00082 Subtilase family LIT25_08385 PF18801 response regulator aspartate phosphatase H, N terminal LIT25_08400 PF13411 MerR HTH family regulatory protein LIT25_08420 PF12804 MobA-like NTP transferase domain LIT25_08425 PF01047 MarR family LIT25_08435 PF01068 ATP dependent DNA ligase domain LIT25_08445 PF02735 Ku70/Ku80 beta-barrel domain LIT25_08450 PF00171 Aldehyde dehydrogenase family LIT25_08455 PF02673 Bacitracin resistance protein BacA LIT25_08460 PF09335 SNARE associated Golgi protein LIT25_08465 PF03741 Integral membrane protein TerC family LIT25_08470 PF04542 Sigma-70 region 2 LIT25_08475 PF12791 Anti-sigma factor N-terminus LIT25_08480 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT25_08490 PF08876 Domain of unknown function (DUF1836) LIT25_08495 PF01435 Peptidase family M48 LIT25_08500 PF02386 Cation transport protein LIT25_08505 PF00905 Penicillin binding protein transpeptidase domain LIT25_08505 PF03717 Penicillin-binding Protein dimerisation domain LIT25_08505 PF05223 NTF2-like N-terminal transpeptidase domain LIT25_08510 PF03816 Cell envelope-related transcriptional attenuator domain LIT25_08515 PF02872 5'-nucleotidase, C-terminal domain LIT25_08515 PF00746 LPXTG cell wall anchor motif LIT25_08515 PF00149 Calcineurin-like phosphoesterase LIT25_08515 PF00565 Staphylococcal nuclease homologue LIT25_08545 PF01757 Acyltransferase family LIT25_08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_08550 PF13188 PAS domain LIT25_08550 PF00989 PAS fold LIT25_08550 PF13426 PAS domain LIT25_08550 PF00512 His Kinase A (phospho-acceptor) domain LIT25_08555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIT25_08555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIT25_08560 PF03301 Tryptophan 2,3-dioxygenase LIT25_08575 PF02653 Branched-chain amino acid transport system / permease component LIT25_08580 PF00005 ABC transporter LIT25_08585 PF13407 Periplasmic binding protein domain LIT25_08590 PF01008 Initiation factor 2 subunit family LIT25_08595 PF01636 Phosphotransferase enzyme family LIT25_08605 PF00155 Aminotransferase class I and II LIT25_08610 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LIT25_08610 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LIT25_08620 PF00596 Class II Aldolase and Adducin N-terminal domain LIT25_08625 PF03079 ARD/ARD' family LIT25_08645 PF02535 ZIP Zinc transporter LIT25_08650 PF00248 Aldo/keto reductase family LIT25_08655 PF00512 His Kinase A (phospho-acceptor) domain LIT25_08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_08655 PF02743 Cache domain LIT25_08660 PF02872 5'-nucleotidase, C-terminal domain LIT25_08660 PF00149 Calcineurin-like phosphoesterase LIT25_08665 PF01047 MarR family LIT25_08675 PF13677 Membrane MotB of proton-channel complex MotA/MotB LIT25_08675 PF00691 OmpA family LIT25_08680 PF01618 MotA/TolQ/ExbB proton channel family LIT25_08695 PF17871 AAA lid domain LIT25_08695 PF07724 AAA domain (Cdc48 subfamily) LIT25_08695 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_08695 PF10431 C-terminal, D2-small domain, of ClpB protein LIT25_08705 PF01595 Cyclin M transmembrane N-terminal domain LIT25_08705 PF03471 Transporter associated domain LIT25_08705 PF00571 CBS domain LIT25_08725 PF06508 Queuosine biosynthesis protein QueC LIT25_08730 PF01242 6-pyruvoyl tetrahydropterin synthase LIT25_08735 PF04055 Radical SAM superfamily LIT25_08740 PF14489 QueF-like protein LIT25_08745 PF00313 'Cold-shock' DNA-binding domain LIT25_08760 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT25_08765 PF07451 Stage V sporulation protein AD (SpoVAD) LIT25_08770 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT25_08780 PF04239 Protein of unknown function (DUF421) LIT25_08785 PF01569 PAP2 superfamily LIT25_08805 PF02586 SOS response associated peptidase (SRAP) LIT25_08810 PF02463 RecF/RecN/SMC N terminal domain LIT25_08815 PF06725 3D domain LIT25_08815 PF03990 G5-linked-Ubiquitin-like domain LIT25_08815 PF07501 G5 domain LIT25_08820 PF00814 Glycoprotease family LIT25_08820 PF00583 Acetyltransferase (GNAT) family LIT25_08825 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) LIT25_08830 PF01734 Patatin-like phospholipase LIT25_08850 PF07486 Cell Wall Hydrolase LIT25_08855 PF03323 Bacillus/Clostridium GerA spore germination protein LIT25_08860 PF03845 Spore germination protein LIT25_08865 PF05504 Spore germination B3/ GerAC like, C-terminal LIT25_08870 PF01943 Polysaccharide biosynthesis protein LIT25_08875 PF07662 Na+ dependent nucleoside transporter C-terminus LIT25_08875 PF07670 Nucleoside recognition LIT25_08875 PF01773 Na+ dependent nucleoside transporter N-terminus LIT25_08925 PF01593 Flavin containing amine oxidoreductase LIT25_08930 PF00557 Metallopeptidase family M24 LIT25_08930 PF01321 Creatinase/Prolidase N-terminal domain LIT25_08935 PF00565 Staphylococcal nuclease homologue LIT25_08965 PF01545 Cation efflux family LIT25_08965 PF16916 Dimerisation domain of Zinc Transporter LIT25_09005 PF03123 CAT RNA binding domain LIT25_09005 PF00874 PRD domain LIT25_09010 PF00367 phosphotransferase system, EIIB LIT25_09010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT25_09010 PF02378 Phosphotransferase system, EIIC LIT25_09015 PF00381 PTS HPr component phosphorylation site LIT25_09020 PF05524 PEP-utilising enzyme, N-terminal LIT25_09020 PF02896 PEP-utilising enzyme, TIM barrel domain LIT25_09020 PF00391 PEP-utilising enzyme, mobile domain LIT25_09030 PF00106 short chain dehydrogenase LIT25_09045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LIT25_09045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIT25_09050 PF00583 Acetyltransferase (GNAT) family LIT25_09055 PF00188 Cysteine-rich secretory protein family LIT25_09060 PF00905 Penicillin binding protein transpeptidase domain LIT25_09060 PF03717 Penicillin-binding Protein dimerisation domain LIT25_09065 PF02627 Carboxymuconolactone decarboxylase family LIT25_09075 PF00989 PAS fold LIT25_09075 PF00512 His Kinase A (phospho-acceptor) domain LIT25_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_09075 PF08447 PAS fold LIT25_09080 PF00155 Aminotransferase class I and II LIT25_09085 PF01544 CorA-like Mg2+ transporter protein LIT25_09110 PF00512 His Kinase A (phospho-acceptor) domain LIT25_09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_09120 PF00860 Permease family LIT25_09125 PF07690 Major Facilitator Superfamily LIT25_09125 PF00083 Sugar (and other) transporter LIT25_09140 PF14177 YkyB-like protein LIT25_09145 PF00672 HAMP domain LIT25_09145 PF01966 HD domain LIT25_09155 PF07690 Major Facilitator Superfamily LIT25_09160 PF03734 L,D-transpeptidase catalytic domain LIT25_09160 PF01476 LysM domain LIT25_09170 PF13090 Polyphosphate kinase C-terminal domain 2 LIT25_09170 PF02503 Polyphosphate kinase middle domain LIT25_09170 PF13089 Polyphosphate kinase N-terminal domain LIT25_09170 PF17941 Polyphosphate kinase C-terminal domain 1 LIT25_09175 PF00990 Diguanylate cyclase, GGDEF domain LIT25_09175 PF13426 PAS domain LIT25_09175 PF00563 EAL domain LIT25_09180 PF10518 TAT (twin-arginine translocation) pathway signal sequence LIT25_09180 PF00149 Calcineurin-like phosphoesterase LIT25_09190 PF10388 EAL-domain associated signalling protein domain LIT25_09190 PF00563 EAL domain LIT25_09215 PF00753 Metallo-beta-lactamase superfamily LIT25_09220 PF08796 Protein of unknown function (DUF1797) LIT25_09230 PF04308 Ribonuclease H-like LIT25_09235 PF14156 Antirepressor AbbA LIT25_09250 PF07690 Major Facilitator Superfamily LIT25_09260 PF01925 Sulfite exporter TauE/SafE LIT25_09265 PF03466 LysR substrate binding domain LIT25_09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT25_09270 PF00258 Flavodoxin LIT25_09280 PF00258 Flavodoxin LIT25_09285 PF00132 Bacterial transferase hexapeptide (six repeats) LIT25_09285 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LIT25_09285 PF14602 Hexapeptide repeat of succinyl-transferase LIT25_09290 PF07687 Peptidase dimerisation domain LIT25_09290 PF01546 Peptidase family M20/M25/M40 LIT25_09295 PF03698 Uncharacterised protein family (UPF0180) LIT25_09305 PF00578 AhpC/TSA family LIT25_09305 PF10417 C-terminal domain of 1-Cys peroxiredoxin LIT25_09310 PF00578 AhpC/TSA family LIT25_09315 PF00107 Zinc-binding dehydrogenase LIT25_09315 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_09320 PF00313 'Cold-shock' DNA-binding domain LIT25_09340 PF00795 Carbon-nitrogen hydrolase LIT25_09345 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_09345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LIT25_09350 PF01180 Dihydroorotate dehydrogenase LIT25_09355 PF01979 Amidohydrolase family LIT25_09360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LIT25_09370 PF17853 GGDEF-like domain LIT25_09370 PF05651 Putative sugar diacid recognition LIT25_09370 PF13556 PucR C-terminal helix-turn-helix domain LIT25_09375 PF00171 Aldehyde dehydrogenase family LIT25_09380 PF00202 Aminotransferase class-III LIT25_09385 PF00455 DeoR C terminal sensor domain LIT25_09385 PF08220 DeoR-like helix-turn-helix domain LIT25_09390 PF14602 Hexapeptide repeat of succinyl-transferase LIT25_09390 PF12464 Maltose acetyltransferase LIT25_09405 PF04229 GrpB protein LIT25_09410 PF03358 NADPH-dependent FMN reductase LIT25_09415 PF00664 ABC transporter transmembrane region LIT25_09415 PF00005 ABC transporter LIT25_09420 PF00664 ABC transporter transmembrane region LIT25_09420 PF00005 ABC transporter LIT25_09425 PF04893 Yip1 domain LIT25_09430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIT25_09435 PF00005 ABC transporter LIT25_09440 PF12704 MacB-like periplasmic core domain LIT25_09440 PF02687 FtsX-like permease family LIT25_09455 PF10502 Signal peptidase, peptidase S26 LIT25_09475 PF00005 ABC transporter LIT25_09475 PF12848 ABC transporter LIT25_09480 PF02558 Ketopantoate reductase PanE/ApbA LIT25_09480 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIT25_09485 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT25_09485 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT25_09490 PF02645 Uncharacterised protein, DegV family COG1307 LIT25_09495 PF02073 Thermophilic metalloprotease (M29) LIT25_09500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_09500 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LIT25_09500 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_09510 PF12848 ABC transporter LIT25_09510 PF00005 ABC transporter LIT25_09515 PF04294 VanW like protein LIT25_09525 PF03061 Thioesterase superfamily LIT25_09535 PF00512 His Kinase A (phospho-acceptor) domain LIT25_09535 PF00989 PAS fold LIT25_09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_09540 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LIT25_09545 PF01654 Cytochrome bd terminal oxidase subunit I LIT25_09550 PF02322 Cytochrome bd terminal oxidase subunit II LIT25_09555 PF02080 TrkA-C domain LIT25_09555 PF02254 TrkA-N domain LIT25_09560 PF13382 Adenine deaminase C-terminal domain LIT25_09560 PF01979 Amidohydrolase family LIT25_09570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT25_09570 PF00753 Metallo-beta-lactamase superfamily LIT25_09570 PF17770 Ribonuclease J C-terminal domain LIT25_09575 PF07288 Protein of unknown function (DUF1447) LIT25_09585 PF01327 Polypeptide deformylase LIT25_09590 PF09680 Family of unknown function LIT25_09600 PF00676 Dehydrogenase E1 component LIT25_09605 PF02779 Transketolase, pyrimidine binding domain LIT25_09605 PF02780 Transketolase, C-terminal domain LIT25_09610 PF02817 e3 binding domain LIT25_09610 PF00364 Biotin-requiring enzyme LIT25_09610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIT25_09615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_09615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT25_09670 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LIT25_09670 PF01276 Orn/Lys/Arg decarboxylase, major domain LIT25_09675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_09675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_09675 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_09690 PF18665 Tetracyclin repressor-like, C-terminal domain LIT25_09690 PF00440 Bacterial regulatory proteins, tetR family LIT25_09700 PF00378 Enoyl-CoA hydratase/isomerase LIT25_09715 PF04029 2-phosphosulpholactate phosphatase LIT25_09720 PF00106 short chain dehydrogenase LIT25_09725 PF00378 Enoyl-CoA hydratase/isomerase LIT25_09730 PF00107 Zinc-binding dehydrogenase LIT25_09730 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_09735 PF00501 AMP-binding enzyme LIT25_09735 PF13193 AMP-binding enzyme C-terminal domain LIT25_09740 PF02126 Phosphotriesterase family LIT25_09745 PF03060 Nitronate monooxygenase LIT25_09750 PF05256 Uncharacterised protein family (UPF0223) LIT25_09755 PF06335 Protein of unknown function (DUF1054) LIT25_09765 PF00459 Inositol monophosphatase family LIT25_09770 PF00583 Acetyltransferase (GNAT) family LIT25_09780 PF14492 Elongation Factor G, domain II LIT25_09780 PF00679 Elongation factor G C-terminus LIT25_09780 PF03144 Elongation factor Tu domain 2 LIT25_09780 PF00009 Elongation factor Tu GTP binding domain LIT25_09785 PF14036 YlaH-like protein LIT25_09800 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) LIT25_09810 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT25_09815 PF02562 PhoH-like protein LIT25_09815 PF13638 PIN domain LIT25_09825 PF04960 Glutaminase LIT25_09830 PF07408 Protein of unknown function (DUF1507) LIT25_09835 PF01098 Cell cycle protein LIT25_09840 PF00364 Biotin-requiring enzyme LIT25_09840 PF02436 Conserved carboxylase domain LIT25_09840 PF00289 Biotin carboxylase, N-terminal domain LIT25_09840 PF00682 HMGL-like LIT25_09840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT25_09840 PF02785 Biotin carboxylase C-terminal domain LIT25_09845 PF02628 Cytochrome oxidase assembly protein LIT25_09850 PF01040 UbiA prenyltransferase family LIT25_09855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LIT25_09855 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LIT25_09855 PF00034 Cytochrome c LIT25_09860 PF00115 Cytochrome C and Quinol oxidase polypeptide I LIT25_09865 PF00510 Cytochrome c oxidase subunit III LIT25_09870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LIT25_09875 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LIT25_09895 PF01594 AI-2E family transporter LIT25_09900 PF08868 YugN-like family LIT25_09905 PF00571 CBS domain LIT25_09910 PF00188 Cysteine-rich secretory protein family LIT25_09910 PF14504 CAP-associated N-terminal LIT25_09920 PF14071 Putative coat protein LIT25_09925 PF14003 YlbE-like protein LIT25_09935 PF06133 Control of competence regulator ComK, YlbF/YmcA LIT25_09945 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LIT25_09960 PF01467 Cytidylyltransferase-like LIT25_09965 PF07670 Nucleoside recognition LIT25_09970 PF01734 Patatin-like phospholipase LIT25_09975 PF05362 Lon protease (S16) C-terminal proteolytic domain LIT25_09975 PF13180 PDZ domain LIT25_09980 PF05636 HIGH Nucleotidyl Transferase LIT25_09985 PF02620 Large ribosomal RNA subunit accumulation protein YceD LIT25_09990 PF01783 Ribosomal L32p protein family LIT25_09995 PF00378 Enoyl-CoA hydratase/isomerase LIT25_10005 PF00583 Acetyltransferase (GNAT) family LIT25_10010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT25_10010 PF00289 Biotin carboxylase, N-terminal domain LIT25_10010 PF02785 Biotin carboxylase C-terminal domain LIT25_10015 PF00364 Biotin-requiring enzyme LIT25_10020 PF01039 Carboxyl transferase domain LIT25_10025 PF02558 Ketopantoate reductase PanE/ApbA LIT25_10025 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIT25_10035 PF10079 Bacillithiol biosynthesis BshC LIT25_10040 PF02381 MraZ protein, putative antitoxin-like LIT25_10045 PF01795 MraW methylase family LIT25_10050 PF04977 Septum formation initiator LIT25_10055 PF03793 PASTA domain LIT25_10055 PF00905 Penicillin binding protein transpeptidase domain LIT25_10055 PF03717 Penicillin-binding Protein dimerisation domain LIT25_10060 PF00905 Penicillin binding protein transpeptidase domain LIT25_10060 PF03717 Penicillin-binding Protein dimerisation domain LIT25_10060 PF03793 PASTA domain LIT25_10065 PF01225 Mur ligase family, catalytic domain LIT25_10065 PF02875 Mur ligase family, glutamate ligase domain LIT25_10065 PF08245 Mur ligase middle domain LIT25_10070 PF00953 Glycosyl transferase family 4 LIT25_10070 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LIT25_10075 PF08245 Mur ligase middle domain LIT25_10075 PF02875 Mur ligase family, glutamate ligase domain LIT25_10080 PF01098 Cell cycle protein LIT25_10085 PF03033 Glycosyltransferase family 28 N-terminal domain LIT25_10085 PF04101 Glycosyltransferase family 28 C-terminal domain LIT25_10090 PF01565 FAD binding domain LIT25_10090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LIT25_10095 PF08478 POTRA domain, FtsQ-type LIT25_10100 PF05949 Bacterial protein of unknown function (DUF881) LIT25_10105 PF05949 Bacterial protein of unknown function (DUF881) LIT25_10110 PF06947 Protein of unknown function (DUF1290) LIT25_10115 PF02491 SHS2 domain inserted in FTSA LIT25_10120 PF00091 Tubulin/FtsZ family, GTPase domain LIT25_10120 PF12327 FtsZ family, C-terminal domain LIT25_10125 PF05922 Peptidase inhibitor I9 LIT25_10125 PF00082 Subtilase family LIT25_10130 PF03419 Sporulation factor SpoIIGA LIT25_10135 PF04542 Sigma-70 region 2 LIT25_10135 PF04545 Sigma-70, region 4 LIT25_10140 PF04545 Sigma-70, region 4 LIT25_10140 PF04542 Sigma-70 region 2 LIT25_10140 PF04539 Sigma-70 region 3 LIT25_10145 PF09323 Domain of unknown function (DUF1980) LIT25_10150 PF03773 Predicted permease LIT25_10155 PF05239 PRC-barrel domain LIT25_10160 PF02578 Multi-copper polyphenol oxidoreductase laccase LIT25_10165 PF01168 Alanine racemase, N-terminal domain LIT25_10170 PF04472 Cell division protein SepF LIT25_10175 PF02325 YGGT family LIT25_10180 PF17774 Putative RNA-binding domain in YlmH LIT25_10180 PF01479 S4 domain LIT25_10185 PF05103 DivIVA protein LIT25_10190 PF06827 Zinc finger found in FPG and IleRS LIT25_10190 PF00133 tRNA synthetases class I (I, L, M and V) LIT25_10190 PF08264 Anticodon-binding domain of tRNA LIT25_10195 PF01258 Prokaryotic dksA/traR C4-type zinc finger LIT25_10200 PF01252 Signal peptidase (SPase) II LIT25_10205 PF00849 RNA pseudouridylate synthase LIT25_10205 PF01479 S4 domain LIT25_10210 PF00156 Phosphoribosyl transferase domain LIT25_10215 PF00860 Permease family LIT25_10220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIT25_10220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIT25_10225 PF01979 Amidohydrolase family LIT25_10230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LIT25_10230 PF00117 Glutamine amidotransferase class-I LIT25_10235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LIT25_10235 PF02142 MGS-like domain LIT25_10235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT25_10240 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LIT25_10240 PF00175 Oxidoreductase NAD-binding domain LIT25_10245 PF01180 Dihydroorotate dehydrogenase LIT25_10250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIT25_10255 PF00156 Phosphoribosyl transferase domain LIT25_10265 PF01507 Phosphoadenosine phosphosulfate reductase family LIT25_10270 PF01384 Phosphate transporter family LIT25_10275 PF01747 ATP-sulfurylase LIT25_10275 PF14306 PUA-like domain LIT25_10285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_10290 PF01903 CbiX LIT25_10300 PF05670 NFACT protein RNA binding domain LIT25_10305 PF00689 Cation transporting ATPase, C-terminus LIT25_10305 PF00690 Cation transporter/ATPase, N-terminus LIT25_10310 PF08340 Domain of unknown function (DUF1732) LIT25_10310 PF03755 YicC-like family, N-terminal region LIT25_10315 PF04025 Domain of unknown function (DUF370) LIT25_10320 PF00625 Guanylate kinase LIT25_10325 PF01192 RNA polymerase Rpb6 LIT25_10330 PF04127 DNA / pantothenate metabolism flavoprotein LIT25_10330 PF02441 Flavoprotein LIT25_10335 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LIT25_10335 PF18074 Primosomal protein N C-terminal domain LIT25_10335 PF17764 3′ DNA-binding domain (3′BD) LIT25_10335 PF00271 Helicase conserved C-terminal domain LIT25_10335 PF04851 Type III restriction enzyme, res subunit LIT25_10340 PF01327 Polypeptide deformylase LIT25_10345 PF02911 Formyl transferase, C-terminal domain LIT25_10345 PF00551 Formyl transferase LIT25_10350 PF01189 16S rRNA methyltransferase RsmB/F LIT25_10350 PF01029 NusB family LIT25_10355 PF04055 Radical SAM superfamily LIT25_10365 PF03793 PASTA domain LIT25_10365 PF00069 Protein kinase domain LIT25_10370 PF03193 RsgA GTPase LIT25_10370 PF16745 RsgA N-terminal domain LIT25_10375 PF00834 Ribulose-phosphate 3 epimerase family LIT25_10380 PF04263 Thiamin pyrophosphokinase, catalytic domain LIT25_10380 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LIT25_10385 PF08183 Stage V sporulation protein family LIT25_10390 PF00830 Ribosomal L28 family LIT25_10395 PF03780 Asp23 family, cell envelope-related function LIT25_10400 PF02734 DAK2 domain LIT25_10400 PF13684 Dihydroxyacetone kinase family LIT25_10405 PF01842 ACT domain LIT25_10405 PF03315 Serine dehydratase beta chain LIT25_10410 PF03313 Serine dehydratase alpha chain LIT25_10415 PF00270 DEAD/DEAH box helicase LIT25_10415 PF00271 Helicase conserved C-terminal domain LIT25_10415 PF17191 RecG wedge domain LIT25_10420 PF01575 MaoC like domain LIT25_10420 PF08279 HTH domain LIT25_10425 PF02504 Fatty acid synthesis protein LIT25_10430 PF00698 Acyl transferase domain LIT25_10440 PF00550 Phosphopantetheine attachment site LIT25_10445 PF00035 Double-stranded RNA binding motif LIT25_10445 PF14622 Ribonuclease-III-like LIT25_10450 PF06470 SMC proteins Flexible Hinge Domain LIT25_10450 PF02463 RecF/RecN/SMC N terminal domain LIT25_10455 PF02881 SRP54-type protein, helical bundle domain LIT25_10455 PF00448 SRP54-type protein, GTPase domain LIT25_10460 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LIT25_10465 PF02978 Signal peptide binding domain LIT25_10465 PF00448 SRP54-type protein, GTPase domain LIT25_10465 PF02881 SRP54-type protein, helical bundle domain LIT25_10470 PF00886 Ribosomal protein S16 LIT25_10480 PF11068 YlqD protein LIT25_10485 PF05239 PRC-barrel domain LIT25_10485 PF01782 RimM N-terminal domain LIT25_10490 PF01746 tRNA (Guanine-1)-methyltransferase LIT25_10495 PF01245 Ribosomal protein L19 LIT25_10500 PF10502 Signal peptidase, peptidase S26 LIT25_10505 PF01926 50S ribosome-binding GTPase LIT25_10510 PF01351 Ribonuclease HII LIT25_10525 PF08442 ATP-grasp domain LIT25_10525 PF00549 CoA-ligase LIT25_10530 PF00549 CoA-ligase LIT25_10530 PF02629 CoA binding domain LIT25_10535 PF02481 DNA recombination-mediator protein A LIT25_10540 PF01131 DNA topoisomerase LIT25_10540 PF01751 Toprim domain LIT25_10540 PF01396 Topoisomerase DNA binding C4 zinc finger LIT25_10545 PF01134 Glucose inhibited division protein A LIT25_10550 PF02899 Phage integrase, N-terminal SAM-like domain LIT25_10550 PF00589 Phage integrase family LIT25_10555 PF00227 Proteasome subunit LIT25_10560 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_10560 PF07724 AAA domain (Cdc48 subfamily) LIT25_10560 PF10431 C-terminal, D2-small domain, of ClpB protein LIT25_10565 PF06018 CodY GAF-like domain LIT25_10565 PF08222 CodY helix-turn-helix domain LIT25_10570 PF00460 Flagella basal body rod protein LIT25_10575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT25_10575 PF00460 Flagella basal body rod protein LIT25_10580 PF02049 Flagellar hook-basal body complex protein FliE LIT25_10585 PF01514 Secretory protein of YscJ/FliF family LIT25_10585 PF08345 Flagellar M-ring protein C-terminal LIT25_10590 PF14842 FliG N-terminal domain LIT25_10590 PF01706 FliG C-terminal domain LIT25_10590 PF14841 FliG middle domain LIT25_10600 PF18269 T3SS EscN ATPase C-terminal domain LIT25_10600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT25_10600 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIT25_10605 PF02050 Flagellar FliJ protein LIT25_10615 PF02120 Flagellar hook-length control protein FliK LIT25_10620 PF03963 Flagellar hook capping protein - N-terminal region LIT25_10625 PF00460 Flagella basal body rod protein LIT25_10625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT25_10630 PF06289 Flagellar and Swarming motility proteins LIT25_10635 PF03748 Flagellar basal body-associated protein FliL LIT25_10640 PF02154 Flagellar motor switch protein FliM LIT25_10640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LIT25_10645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LIT25_10645 PF04509 CheC-like family LIT25_10650 PF00072 Response regulator receiver domain LIT25_10655 PF04347 Flagellar biosynthesis protein, FliO LIT25_10660 PF00813 FliP family LIT25_10665 PF01313 Bacterial export proteins, family 3 LIT25_10670 PF01311 Bacterial export proteins, family 1 LIT25_10675 PF01312 FlhB HrpN YscU SpaS Family LIT25_10680 PF00771 FHIPEP family LIT25_10685 PF00448 SRP54-type protein, GTPase domain LIT25_10700 PF00318 Ribosomal protein S2 LIT25_10705 PF00889 Elongation factor TS LIT25_10710 PF00696 Amino acid kinase family LIT25_10715 PF01765 Ribosome recycling factor LIT25_10720 PF01255 Putative undecaprenyl diphosphate synthase LIT25_10730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LIT25_10730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LIT25_10730 PF13288 DXP reductoisomerase C-terminal domain LIT25_10735 PF17820 PDZ domain LIT25_10735 PF02163 Peptidase family M50 LIT25_10740 PF03129 Anticodon binding domain LIT25_10740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT25_10740 PF04073 Aminoacyl-tRNA editing domain LIT25_10745 PF00929 Exonuclease LIT25_10745 PF02811 PHP domain LIT25_10745 PF11490 DNA polymerase III polC-type N-terminus II LIT25_10745 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT25_10745 PF14480 DNA polymerase III polC-type N-terminus I LIT25_10745 PF14579 Helix-hairpin-helix motif LIT25_10745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT25_10750 PF02576 RimP N-terminal domain LIT25_10750 PF17384 RimP C-terminal SH3 domain LIT25_10755 PF00575 S1 RNA binding domain LIT25_10755 PF13184 NusA-like KH domain LIT25_10755 PF08529 NusA N-terminal domain LIT25_10760 PF04296 Protein of unknown function (DUF448) LIT25_10765 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LIT25_10770 PF00009 Elongation factor Tu GTP binding domain LIT25_10770 PF04760 Translation initiation factor IF-2, N-terminal region LIT25_10770 PF11987 Translation-initiation factor 2 LIT25_10775 PF04456 Protein of unknown function (DUF503) LIT25_10780 PF02033 Ribosome-binding factor A LIT25_10785 PF01509 TruB family pseudouridylate synthase (N terminal domain) LIT25_10785 PF16198 tRNA pseudouridylate synthase B C-terminal domain LIT25_10790 PF01687 Riboflavin kinase LIT25_10790 PF06574 FAD synthetase LIT25_10795 PF00312 Ribosomal protein S15 LIT25_10800 PF01138 3' exoribonuclease family, domain 1 LIT25_10800 PF00575 S1 RNA binding domain LIT25_10800 PF00013 KH domain LIT25_10800 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LIT25_10800 PF03725 3' exoribonuclease family, domain 2 LIT25_10805 PF01522 Polysaccharide deacetylase LIT25_10810 PF00675 Insulinase (Peptidase family M16) LIT25_10810 PF05193 Peptidase M16 inactive domain LIT25_10815 PF05239 PRC-barrel domain LIT25_10820 PF16924 Dipicolinate synthase subunit A N-terminal domain LIT25_10820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIT25_10825 PF02441 Flavoprotein LIT25_10830 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIT25_10830 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIT25_10835 PF00696 Amino acid kinase family LIT25_10835 PF13840 ACT domain LIT25_10840 PF00701 Dihydrodipicolinate synthetase family LIT25_10845 PF00753 Metallo-beta-lactamase superfamily LIT25_10845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIT25_10845 PF17770 Ribonuclease J C-terminal domain LIT25_10850 PF00574 Clp protease LIT25_10855 PF14035 YlzJ-like protein LIT25_10860 PF01580 FtsK/SpoIIIE family LIT25_10860 PF17854 FtsK alpha domain LIT25_10860 PF09397 Ftsk gamma domain LIT25_10865 PF00392 Bacterial regulatory proteins, gntR family LIT25_10865 PF07702 UTRA domain LIT25_10870 PF02608 ABC transporter substrate-binding protein PnrA-like LIT25_10875 PF00005 ABC transporter LIT25_10880 PF02653 Branched-chain amino acid transport system / permease component LIT25_10885 PF02653 Branched-chain amino acid transport system / permease component LIT25_10895 PF05193 Peptidase M16 inactive domain LIT25_10900 PF05193 Peptidase M16 inactive domain LIT25_10900 PF00675 Insulinase (Peptidase family M16) LIT25_10910 PF11588 Protein of unknown function (DUF3243) LIT25_10915 PF11868 Protein of unknown function (DUF3388) LIT25_10920 PF13464 Domain of unknown function (DUF4115) LIT25_10925 PF01066 CDP-alcohol phosphatidyltransferase LIT25_10930 PF02464 Competence-damaged protein LIT25_10930 PF18146 Damage-inducible protein CinA KH domain LIT25_10930 PF00994 Probable molybdopterin binding domain LIT25_10935 PF00154 recA bacterial DNA recombination protein LIT25_10940 PF12072 Domain of unknown function (DUF3552) LIT25_10940 PF01966 HD domain LIT25_10940 PF00013 KH domain LIT25_10945 PF13277 YmdB-like protein LIT25_10950 PF04232 Stage V sporulation protein S (SpoVS) LIT25_10955 PF01244 Membrane dipeptidase (Peptidase family M19) LIT25_10965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT25_10970 PF00107 Zinc-binding dehydrogenase LIT25_10970 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_10975 PF00155 Aminotransferase class I and II LIT25_10980 PF04055 Radical SAM superfamily LIT25_10980 PF00919 Uncharacterized protein family UPF0004 LIT25_10980 PF01938 TRAM domain LIT25_10985 PF06133 Control of competence regulator ComK, YlbF/YmcA LIT25_10995 PF10628 Outer spore coat protein E (CotE) LIT25_11000 PF00488 MutS domain V LIT25_11000 PF05192 MutS domain III LIT25_11000 PF05190 MutS family domain IV LIT25_11000 PF01624 MutS domain I LIT25_11000 PF05188 MutS domain II LIT25_11005 PF08676 MutL C terminal dimerisation domain LIT25_11005 PF01119 DNA mismatch repair protein, C-terminal domain LIT25_11015 PF09680 Family of unknown function LIT25_11025 PF03601 Conserved hypothetical protein 698 LIT25_11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT25_11030 PF03466 LysR substrate binding domain LIT25_11035 PF13193 AMP-binding enzyme C-terminal domain LIT25_11035 PF00501 AMP-binding enzyme LIT25_11045 PF07690 Major Facilitator Superfamily LIT25_11055 PF07859 alpha/beta hydrolase fold LIT25_11070 PF07690 Major Facilitator Superfamily LIT25_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT25_11085 PF03466 LysR substrate binding domain LIT25_11100 PF00106 short chain dehydrogenase LIT25_11105 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_11105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_11105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_11115 PF01012 Electron transfer flavoprotein domain LIT25_11120 PF00766 Electron transfer flavoprotein FAD-binding domain LIT25_11120 PF01012 Electron transfer flavoprotein domain LIT25_11125 PF02785 Biotin carboxylase C-terminal domain LIT25_11125 PF00289 Biotin carboxylase, N-terminal domain LIT25_11125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT25_11130 PF00364 Biotin-requiring enzyme LIT25_11135 PF01039 Carboxyl transferase domain LIT25_11145 PF13333 Integrase core domain LIT25_11145 PF00665 Integrase core domain LIT25_11145 PF13276 HTH-like domain LIT25_11150 PF13443 Cro/C1-type HTH DNA-binding domain LIT25_11155 PF11188 Protein of unknown function (DUF2975) LIT25_11180 PF01810 LysE type translocator LIT25_11205 PF17209 Hfq protein LIT25_11210 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_11210 PF17866 AAA lid domain LIT25_11215 PF03458 UPF0126 domain LIT25_11220 PF13167 GTP-binding GTPase N-terminal LIT25_11220 PF01926 50S ribosome-binding GTPase LIT25_11220 PF16360 GTP-binding GTPase Middle Region LIT25_11225 PF06838 Methionine gamma-lyase LIT25_11230 PF13411 MerR HTH family regulatory protein LIT25_11235 PF03951 Glutamine synthetase, beta-Grasp domain LIT25_11235 PF00120 Glutamine synthetase, catalytic domain LIT25_11240 PF00877 NlpC/P60 family LIT25_11275 PF01068 ATP dependent DNA ligase domain LIT25_11280 PF10901 Protein of unknown function (DUF2690) LIT25_11290 PF00440 Bacterial regulatory proteins, tetR family LIT25_11310 PF13276 HTH-like domain LIT25_11310 PF00665 Integrase core domain LIT25_11310 PF13333 Integrase core domain LIT25_11345 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_11350 PF07739 TipAS antibiotic-recognition domain LIT25_11350 PF13411 MerR HTH family regulatory protein LIT25_11355 PF13460 NAD(P)H-binding LIT25_11360 PF00797 N-acetyltransferase LIT25_11390 PF04304 Protein of unknown function (DUF454) LIT25_11395 PF13031 Protein of unknown function (DUF3892) LIT25_11405 PF00583 Acetyltransferase (GNAT) family LIT25_11415 PF12833 Helix-turn-helix domain LIT25_11485 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT25_11500 PF00672 HAMP domain LIT25_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_11500 PF06580 Histidine kinase LIT25_11500 PF02743 Cache domain LIT25_11505 PF12833 Helix-turn-helix domain LIT25_11505 PF00072 Response regulator receiver domain LIT25_11515 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_11520 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_11530 PF02929 Beta galactosidase small chain LIT25_11530 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LIT25_11530 PF00703 Glycosyl hydrolases family 2 LIT25_11530 PF16353 Domain of unknown function(DUF4981) LIT25_11530 PF02837 Glycosyl hydrolases family 2, sugar binding domain LIT25_11540 PF03992 Antibiotic biosynthesis monooxygenase LIT25_11580 PF00356 Bacterial regulatory proteins, lacI family LIT25_11585 PF00356 Bacterial regulatory proteins, lacI family LIT25_11585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIT25_11590 PF05116 Sucrose-6F-phosphate phosphohydrolase LIT25_11595 PF03819 MazG nucleotide pyrophosphohydrolase domain LIT25_11610 PF13333 Integrase core domain LIT25_11610 PF13276 HTH-like domain LIT25_11610 PF00665 Integrase core domain LIT25_11615 PF07729 FCD domain LIT25_11615 PF00392 Bacterial regulatory proteins, gntR family LIT25_11620 PF05525 Branched-chain amino acid transport protein LIT25_11630 PF02525 Flavodoxin-like fold LIT25_11640 PF01047 MarR family LIT25_11655 PF03992 Antibiotic biosynthesis monooxygenase LIT25_11660 PF07702 UTRA domain LIT25_11660 PF00392 Bacterial regulatory proteins, gntR family LIT25_11670 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_11675 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_11680 PF00005 ABC transporter LIT25_11680 PF03459 TOBE domain LIT25_11680 PF17912 MalK OB fold domain LIT25_11695 PF01554 MatE LIT25_11710 PF00108 Thiolase, N-terminal domain LIT25_11710 PF02803 Thiolase, C-terminal domain LIT25_11720 PF02310 B12 binding domain LIT25_11725 PF01642 Methylmalonyl-CoA mutase LIT25_11730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_11730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_11730 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_11735 PF13193 AMP-binding enzyme C-terminal domain LIT25_11735 PF00501 AMP-binding enzyme LIT25_11740 PF01321 Creatinase/Prolidase N-terminal domain LIT25_11740 PF00557 Metallopeptidase family M24 LIT25_11745 PF17922 Tetracyclin repressor-like, C-terminal domain LIT25_11745 PF00440 Bacterial regulatory proteins, tetR family LIT25_11770 PF00501 AMP-binding enzyme LIT25_11770 PF14535 AMP-binding enzyme C-terminal domain LIT25_11775 PF00067 Cytochrome P450 LIT25_11785 PF00440 Bacterial regulatory proteins, tetR family LIT25_11815 PF07690 Major Facilitator Superfamily LIT25_11820 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) LIT25_11825 PF00300 Histidine phosphatase superfamily (branch 1) LIT25_11830 PF03323 Bacillus/Clostridium GerA spore germination protein LIT25_11835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_11850 PF13243 Squalene-hopene cyclase C-terminal domain LIT25_11850 PF13249 Squalene-hopene cyclase N-terminal domain LIT25_11890 PF05593 RHS Repeat LIT25_11900 PF07731 Multicopper oxidase LIT25_11900 PF07732 Multicopper oxidase LIT25_11900 PF00394 Multicopper oxidase LIT25_11910 PF04309 Glycerol-3-phosphate responsive antiterminator LIT25_11945 PF01022 Bacterial regulatory protein, arsR family LIT25_11980 PF01593 Flavin containing amine oxidoreductase LIT25_11990 PF04101 Glycosyltransferase family 28 C-terminal domain LIT25_11990 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT25_11995 PF00149 Calcineurin-like phosphoesterase LIT25_12005 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT25_12025 PF14659 Phage integrase, N-terminal SAM-like domain LIT25_12025 PF00589 Phage integrase family LIT25_12040 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_12050 PF13333 Integrase core domain LIT25_12050 PF00665 Integrase core domain LIT25_12050 PF13276 HTH-like domain LIT25_12070 PF00302 Chloramphenicol acetyltransferase LIT25_12075 PF00440 Bacterial regulatory proteins, tetR family LIT25_12080 PF01144 Coenzyme A transferase LIT25_12085 PF01144 Coenzyme A transferase LIT25_12095 PF00108 Thiolase, N-terminal domain LIT25_12095 PF02803 Thiolase, C-terminal domain LIT25_12100 PF07690 Major Facilitator Superfamily LIT25_12150 PF00106 short chain dehydrogenase LIT25_12155 PF01494 FAD binding domain LIT25_12160 PF16295 Tetracyclin repressor-like, C-terminal domain LIT25_12160 PF00440 Bacterial regulatory proteins, tetR family LIT25_12185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_12185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_12190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_12190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_12200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_12200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_12215 PF01418 Helix-turn-helix domain, rpiR family LIT25_12215 PF01380 SIS domain LIT25_12225 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_12230 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_12240 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LIT25_12245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_12245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_12250 PF00480 ROK family LIT25_12260 PF07702 UTRA domain LIT25_12260 PF00392 Bacterial regulatory proteins, gntR family LIT25_12285 PF07971 Glycosyl hydrolase family 92 LIT25_12285 PF17678 Glycosyl hydrolase family 92 N-terminal domain LIT25_12305 PF01609 Transposase DDE domain LIT25_12310 PF13302 Acetyltransferase (GNAT) domain LIT25_12320 PF00196 Bacterial regulatory proteins, luxR family LIT25_12320 PF00072 Response regulator receiver domain LIT25_12325 PF00465 Iron-containing alcohol dehydrogenase LIT25_12330 PF07859 alpha/beta hydrolase fold LIT25_12340 PF00171 Aldehyde dehydrogenase family LIT25_12345 PF07690 Major Facilitator Superfamily LIT25_12360 PF02796 Helix-turn-helix domain of resolvase LIT25_12360 PF00239 Resolvase, N terminal domain LIT25_12365 PF00440 Bacterial regulatory proteins, tetR family LIT25_12375 PF01726 LexA DNA binding domain LIT25_12375 PF00717 Peptidase S24-like LIT25_12380 PF01476 LysM domain LIT25_12385 PF00239 Resolvase, N terminal domain LIT25_12390 PF05979 Bacterial protein of unknown function (DUF896) LIT25_12395 PF02779 Transketolase, pyrimidine binding domain LIT25_12395 PF02780 Transketolase, C-terminal domain LIT25_12395 PF00456 Transketolase, thiamine diphosphate binding domain LIT25_12400 PF10747 Sporulation inhibitor of replication protein SirA LIT25_12405 PF03672 Uncharacterised protein family (UPF0154) LIT25_12420 PF00589 Phage integrase family LIT25_12420 PF02899 Phage integrase, N-terminal SAM-like domain LIT25_12445 PF09388 Spo0E like sporulation regulatory protein LIT25_12450 PF02683 Cytochrome C biogenesis protein transmembrane region LIT25_12460 PF07301 Protein of unknown function (DUF1453) LIT25_12465 PF11084 Protein of unknown function (DUF2621) LIT25_12490 PF08179 Small acid-soluble spore protein P family LIT25_12505 PF00330 Aconitase family (aconitate hydratase) LIT25_12505 PF00694 Aconitase C-terminal domain LIT25_12510 PF00578 AhpC/TSA family LIT25_12515 PF13040 Fur-regulated basic protein B LIT25_12520 PF08177 Small acid-soluble spore protein N family LIT25_12530 PF03061 Thioesterase superfamily LIT25_12540 PF01521 Iron-sulphur cluster biosynthesis LIT25_12545 PF09587 Bacterial capsule synthesis protein PGA_cap LIT25_12550 PF02660 Glycerol-3-phosphate acyltransferase LIT25_12555 PF13380 CoA binding domain LIT25_12570 PF00204 DNA gyrase B LIT25_12570 PF00986 DNA gyrase B subunit, carboxyl terminus LIT25_12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_12570 PF01751 Toprim domain LIT25_12575 PF03989 DNA gyrase C-terminal domain, beta-propeller LIT25_12575 PF00521 DNA gyrase/topoisomerase IV, subunit A LIT25_12585 PF01235 Sodium:alanine symporter family LIT25_12600 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_12605 PF02632 BioY family LIT25_12610 PF00501 AMP-binding enzyme LIT25_12610 PF13193 AMP-binding enzyme C-terminal domain LIT25_12615 PF00108 Thiolase, N-terminal domain LIT25_12615 PF02803 Thiolase, C-terminal domain LIT25_12625 PF00294 pfkB family carbohydrate kinase LIT25_12640 PF00005 ABC transporter LIT25_12640 PF13732 Domain of unknown function (DUF4162) LIT25_12655 PF01804 Penicillin amidase LIT25_12675 PF01447 Thermolysin metallopeptidase, catalytic domain LIT25_12675 PF03413 Peptidase propeptide and YPEB domain LIT25_12675 PF02868 Thermolysin metallopeptidase, alpha-helical domain LIT25_12675 PF07504 Fungalysin/Thermolysin Propeptide Motif LIT25_12685 PF10127 RNA repair pathway DNA polymerase beta family LIT25_12695 PF01022 Bacterial regulatory protein, arsR family LIT25_12715 PF02654 Cobalamin-5-phosphate synthase LIT25_12720 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LIT25_12725 PF00155 Aminotransferase class I and II LIT25_12730 PF03186 CobD/Cbib protein LIT25_12735 PF00005 ABC transporter LIT25_12740 PF01032 FecCD transport family LIT25_12745 PF01497 Periplasmic binding protein LIT25_12750 PF02277 Phosphoribosyltransferase LIT25_12755 PF07685 CobB/CobQ-like glutamine amidotransferase domain LIT25_12755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LIT25_12760 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LIT25_12760 PF12557 Cob(I)alamin adenosyltransferase N terminal LIT25_12770 PF01546 Peptidase family M20/M25/M40 LIT25_12770 PF07687 Peptidase dimerisation domain LIT25_12795 PF01266 FAD dependent oxidoreductase LIT25_12810 PF06949 Protein of unknown function (DUF1292) LIT25_12815 PF07690 Major Facilitator Superfamily LIT25_12820 PF01541 GIY-YIG catalytic domain LIT25_12830 PF05995 Cysteine dioxygenase type I LIT25_12865 PF04203 Sortase domain LIT25_12890 PF02334 Replication terminator protein LIT25_12900 PF00535 Glycosyl transferase family 2 LIT25_12920 PF07849 Protein of unknown function (DUF1641) LIT25_12925 PF00384 Molybdopterin oxidoreductase LIT25_12925 PF01568 Molydopterin dinucleotide binding domain LIT25_12925 PF12838 4Fe-4S dicluster domain LIT25_12925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIT25_12925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LIT25_12930 PF02597 ThiS family LIT25_12935 PF02391 MoaE protein LIT25_12940 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LIT25_12945 PF03453 MoeA N-terminal region (domain I and II) LIT25_12945 PF03454 MoeA C-terminal region (domain IV) LIT25_12945 PF00994 Probable molybdopterin binding domain LIT25_12950 PF04055 Radical SAM superfamily LIT25_12950 PF06463 Molybdenum Cofactor Synthesis C LIT25_12955 PF02634 FdhD/NarQ family LIT25_12960 PF02675 S-adenosylmethionine decarboxylase LIT25_12980 PF00488 MutS domain V LIT25_12980 PF01713 Smr domain LIT25_12985 PF02682 Carboxyltransferase domain, subdomain C and D LIT25_12990 PF02626 Carboxyltransferase domain, subdomain A and B LIT25_12995 PF03746 LamB/YcsF family LIT25_13000 PF01566 Natural resistance-associated macrophage protein LIT25_13005 PF02589 LUD domain LIT25_13010 PF13183 4Fe-4S dicluster domain LIT25_13010 PF11870 Domain of unknown function (DUF3390) LIT25_13010 PF02589 LUD domain LIT25_13015 PF02754 Cysteine-rich domain LIT25_13020 PF13183 4Fe-4S dicluster domain LIT25_13020 PF02754 Cysteine-rich domain LIT25_13025 PF02913 FAD linked oxidases, C-terminal domain LIT25_13025 PF01565 FAD binding domain LIT25_13030 PF05651 Putative sugar diacid recognition LIT25_13030 PF17853 GGDEF-like domain LIT25_13030 PF13556 PucR C-terminal helix-turn-helix domain LIT25_13035 PF01965 DJ-1/PfpI family LIT25_13050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LIT25_13060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIT25_13060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIT25_13065 PF12833 Helix-turn-helix domain LIT25_13065 PF02805 Metal binding domain of Ada LIT25_13070 PF02652 L-lactate permease LIT25_13075 PF09339 IclR helix-turn-helix domain LIT25_13075 PF01614 Bacterial transcriptional regulator LIT25_13080 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT25_13085 PF03949 Malic enzyme, NAD binding domain LIT25_13085 PF00390 Malic enzyme, N-terminal domain LIT25_13090 PF01274 Malate synthase LIT25_13095 PF02913 FAD linked oxidases, C-terminal domain LIT25_13095 PF01565 FAD binding domain LIT25_13100 PF02754 Cysteine-rich domain LIT25_13100 PF13183 4Fe-4S dicluster domain LIT25_13105 PF01565 FAD binding domain LIT25_13105 PF02913 FAD linked oxidases, C-terminal domain LIT25_13110 PF07729 FCD domain LIT25_13110 PF00392 Bacterial regulatory proteins, gntR family LIT25_13115 PF01636 Phosphotransferase enzyme family LIT25_13120 PF00107 Zinc-binding dehydrogenase LIT25_13120 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_13125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_13125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_13135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_13135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_13140 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_13145 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_13150 PF13416 Bacterial extracellular solute-binding protein LIT25_13155 PF00392 Bacterial regulatory proteins, gntR family LIT25_13160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_13160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_13170 PF07486 Cell Wall Hydrolase LIT25_13175 PF00583 Acetyltransferase (GNAT) family LIT25_13180 PF00795 Carbon-nitrogen hydrolase LIT25_13180 PF00583 Acetyltransferase (GNAT) family LIT25_13190 PF00512 His Kinase A (phospho-acceptor) domain LIT25_13190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_13190 PF00989 PAS fold LIT25_13190 PF08447 PAS fold LIT25_13195 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_13240 PF05163 DinB family LIT25_13245 PF03575 Peptidase family S51 LIT25_13280 PF00005 ABC transporter LIT25_13280 PF00664 ABC transporter transmembrane region LIT25_13290 PF00664 ABC transporter transmembrane region LIT25_13290 PF00005 ABC transporter LIT25_13320 PF00733 Asparagine synthase LIT25_13320 PF13537 Glutamine amidotransferase domain LIT25_13320 PF00733 Asparagine synthase LIT25_13320 PF13537 Glutamine amidotransferase domain LIT25_13325 PF16363 GDP-mannose 4,6 dehydratase LIT25_13335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LIT25_13345 PF01820 D-ala D-ala ligase N-terminus LIT25_13345 PF07478 D-ala D-ala ligase C-terminus LIT25_13350 PF02397 Bacterial sugar transferase LIT25_13385 PF01757 Acyltransferase family LIT25_13395 PF00535 Glycosyl transferase family 2 LIT25_13400 PF00534 Glycosyl transferases group 1 LIT25_13400 PF13439 Glycosyltransferase Family 4 LIT25_13405 PF00535 Glycosyl transferase family 2 LIT25_13410 PF13439 Glycosyltransferase Family 4 LIT25_13410 PF00534 Glycosyl transferases group 1 LIT25_13415 PF02719 Polysaccharide biosynthesis protein LIT25_13425 PF13614 AAA domain LIT25_13430 PF13807 G-rich domain on putative tyrosine kinase LIT25_13430 PF02706 Chain length determinant protein LIT25_13435 PF01381 Helix-turn-helix LIT25_13435 PF08671 Anti-repressor SinI LIT25_13460 PF00465 Iron-containing alcohol dehydrogenase LIT25_13475 PF00171 Aldehyde dehydrogenase family LIT25_13480 PF00465 Iron-containing alcohol dehydrogenase LIT25_13485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT25_13485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT25_13490 PF13840 ACT domain LIT25_13490 PF00696 Amino acid kinase family LIT25_13495 PF07690 Major Facilitator Superfamily LIT25_13500 PF06725 3D domain LIT25_13500 PF01476 LysM domain LIT25_13505 PF00440 Bacterial regulatory proteins, tetR family LIT25_13505 PF17922 Tetracyclin repressor-like, C-terminal domain LIT25_13510 PF00854 POT family LIT25_13525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_13525 PF00512 His Kinase A (phospho-acceptor) domain LIT25_13540 PF08220 DeoR-like helix-turn-helix domain LIT25_13540 PF00455 DeoR C terminal sensor domain LIT25_13545 PF06276 Ferric iron reductase FhuF-like transporter LIT25_13545 PF04183 IucA / IucC family LIT25_13550 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LIT25_13560 PF06276 Ferric iron reductase FhuF-like transporter LIT25_13560 PF04183 IucA / IucC family LIT25_13565 PF00282 Pyridoxal-dependent decarboxylase conserved domain LIT25_13570 PF00202 Aminotransferase class-III LIT25_13575 PF07859 alpha/beta hydrolase fold LIT25_13590 PF02581 Thiamine monophosphate synthase LIT25_13595 PF08543 Phosphomethylpyrimidine kinase LIT25_13600 PF02110 Hydroxyethylthiazole kinase family LIT25_13610 PF01810 LysE type translocator LIT25_13615 PF00209 Sodium:neurotransmitter symporter family LIT25_13625 PF10503 Esterase PHB depolymerase LIT25_13630 PF02096 60Kd inner membrane protein LIT25_13640 PF00881 Nitroreductase family LIT25_13655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_13660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LIT25_13660 PF07685 CobB/CobQ-like glutamine amidotransferase domain LIT25_13665 PF11761 Cobalamin biosynthesis central region LIT25_13665 PF11760 Cobalamin synthesis G N-terminal LIT25_13665 PF01890 Cobalamin synthesis G C-terminus LIT25_13670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_13675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_13680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_13685 PF01888 CbiD LIT25_13690 PF02570 Precorrin-8X methylmutase LIT25_13695 PF02571 Precorrin-6x reductase CbiJ/CobK LIT25_13700 PF01903 CbiX LIT25_13705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIT25_13705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIT25_13715 PF01891 Cobalt uptake substrate-specific transmembrane region LIT25_13720 PF02553 Cobalt transport protein component CbiN LIT25_13730 PF00005 ABC transporter LIT25_13735 PF05163 DinB family LIT25_13760 PF08439 Oligopeptidase F LIT25_13760 PF01432 Peptidase family M3 LIT25_13765 PF00570 HRDC domain LIT25_13765 PF09382 RQC domain LIT25_13765 PF16124 RecQ zinc-binding LIT25_13765 PF00271 Helicase conserved C-terminal domain LIT25_13765 PF00270 DEAD/DEAH box helicase LIT25_13770 PF14169 Cold-inducible protein YdjO LIT25_13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_13785 PF13426 PAS domain LIT25_13785 PF13188 PAS domain LIT25_13785 PF00512 His Kinase A (phospho-acceptor) domain LIT25_13785 PF00989 PAS fold LIT25_13795 PF01411 tRNA synthetases class II (A) LIT25_13795 PF02272 DHHA1 domain LIT25_13795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT25_13820 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT25_13830 PF06800 Sugar transport protein LIT25_13845 PF00171 Aldehyde dehydrogenase family LIT25_13870 PF00326 Prolyl oligopeptidase family LIT25_13875 PF08678 Rsbr N terminal LIT25_13875 PF01740 STAS domain LIT25_13910 PF02817 e3 binding domain LIT25_13910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIT25_13910 PF00364 Biotin-requiring enzyme LIT25_13915 PF00676 Dehydrogenase E1 component LIT25_13915 PF16870 2-oxoglutarate dehydrogenase C-terminal LIT25_13915 PF02779 Transketolase, pyrimidine binding domain LIT25_13930 PF00092 von Willebrand factor type A domain LIT25_13935 PF07728 AAA domain (dynein-related subfamily) LIT25_13945 PF00589 Phage integrase family LIT25_13945 PF02899 Phage integrase, N-terminal SAM-like domain LIT25_13975 PF14864 Alkyl sulfatase C-terminal LIT25_13975 PF14863 Alkyl sulfatase dimerisation LIT25_13975 PF00753 Metallo-beta-lactamase superfamily LIT25_13990 PF05067 Manganese containing catalase LIT25_14015 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_14020 PF02374 Anion-transporting ATPase LIT25_14025 PF06953 Arsenical resistance operon trans-acting repressor ArsD LIT25_14030 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT25_14035 PF02040 Arsenical pump membrane protein LIT25_14040 PF01022 Bacterial regulatory protein, arsR family LIT25_14070 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_14100 PF07883 Cupin domain LIT25_14130 PF13610 DDE domain LIT25_14160 PF16242 Pyridoxamine 5'-phosphate oxidase like LIT25_14165 PF03851 UV-endonuclease UvdE LIT25_14175 PF03851 UV-endonuclease UvdE LIT25_14190 PF00296 Luciferase-like monooxygenase LIT25_14200 PF00155 Aminotransferase class I and II LIT25_14200 PF00392 Bacterial regulatory proteins, gntR family LIT25_14210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_14210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_14215 PF04294 VanW like protein LIT25_14220 PF00884 Sulfatase LIT25_14225 PF13627 Prokaryotic lipoprotein-attachment site LIT25_14225 PF00080 Copper/zinc superoxide dismutase (SODC) LIT25_14235 PF13739 Deacetylase PdaC LIT25_14235 PF11738 Protein of unknown function (DUF3298) LIT25_14240 PF01476 LysM domain LIT25_14240 PF00877 NlpC/P60 family LIT25_14255 PF07690 Major Facilitator Superfamily LIT25_14260 PF00860 Permease family LIT25_14265 PF10372 Bacterial membrane-spanning protein N-terminus LIT25_14265 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIT25_14270 PF01554 MatE LIT25_14275 PF02585 GlcNAc-PI de-N-acetylase LIT25_14280 PF08830 Protein of unknown function (DUF1806) LIT25_14290 PF00892 EamA-like transporter family LIT25_14305 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) LIT25_14315 PF01638 HxlR-like helix-turn-helix LIT25_14320 PF00881 Nitroreductase family LIT25_14330 PF01738 Dienelactone hydrolase family LIT25_14335 PF03358 NADPH-dependent FMN reductase LIT25_14340 PF03572 Peptidase family S41 LIT25_14340 PF17820 PDZ domain LIT25_14340 PF01471 Putative peptidoglycan binding domain LIT25_14345 PF08241 Methyltransferase domain LIT25_14360 PF02557 D-alanyl-D-alanine carboxypeptidase LIT25_14365 PF01048 Phosphorylase superfamily LIT25_14375 PF14191 YodL-like LIT25_14380 PF01569 PAP2 superfamily LIT25_14390 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_14395 PF01925 Sulfite exporter TauE/SafE LIT25_14430 PF07070 SpoOM protein LIT25_14435 PF08239 Bacterial SH3 domain LIT25_14435 PF00069 Protein kinase domain LIT25_14445 PF10720 Protein of unknown function (DUF2515) LIT25_14450 PF14162 YozD-like protein LIT25_14470 PF09529 Integral membrane protein (intg_mem_TP0381) LIT25_14485 PF00005 ABC transporter LIT25_14490 PF17885 Styrene monooxygenase A putative substrate binding domain LIT25_14500 PF04439 Streptomycin adenylyltransferase LIT25_14515 PF00884 Sulfatase LIT25_14525 PF07690 Major Facilitator Superfamily LIT25_14535 PF00704 Glycosyl hydrolases family 18 LIT25_14540 PF00905 Penicillin binding protein transpeptidase domain LIT25_14545 PF00155 Aminotransferase class I and II LIT25_14545 PF00392 Bacterial regulatory proteins, gntR family LIT25_14550 PF13302 Acetyltransferase (GNAT) domain LIT25_14565 PF12823 Domain of unknown function (DUF3817) LIT25_14570 PF05163 DinB family LIT25_14575 PF07690 Major Facilitator Superfamily LIT25_14580 PF01047 MarR family LIT25_14585 PF06855 YozE SAM-like fold LIT25_14590 PF14122 YokU-like protein, putative antitoxin LIT25_14595 PF12544 Lysine-2,3-aminomutase LIT25_14600 PF00158 Sigma-54 interaction domain LIT25_14600 PF13426 PAS domain LIT25_14600 PF02954 Bacterial regulatory protein, Fis family LIT25_14605 PF00583 Acetyltransferase (GNAT) family LIT25_14610 PF00171 Aldehyde dehydrogenase family LIT25_14615 PF07687 Peptidase dimerisation domain LIT25_14615 PF01546 Peptidase family M20/M25/M40 LIT25_14620 PF01144 Coenzyme A transferase LIT25_14625 PF01144 Coenzyme A transferase LIT25_14630 PF00202 Aminotransferase class-III LIT25_14650 PF02675 S-adenosylmethionine decarboxylase LIT25_14660 PF04607 Region found in RelA / SpoT proteins LIT25_14665 PF03960 ArsC family LIT25_14670 PF01425 Amidase LIT25_14685 PF02954 Bacterial regulatory protein, Fis family LIT25_14685 PF00989 PAS fold LIT25_14685 PF00158 Sigma-54 interaction domain LIT25_14695 PF01144 Coenzyme A transferase LIT25_14700 PF01144 Coenzyme A transferase LIT25_14715 PF13419 Haloacid dehalogenase-like hydrolase LIT25_14725 PF00561 alpha/beta hydrolase fold LIT25_14735 PF01522 Polysaccharide deacetylase LIT25_14735 PF00457 Glycosyl hydrolases family 11 LIT25_14735 PF03422 Carbohydrate binding module (family 6) LIT25_14740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_14745 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_14750 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT25_14765 PF13536 Putative multidrug resistance efflux transporter LIT25_14780 PF12679 ABC-2 family transporter protein LIT25_14785 PF00005 ABC transporter LIT25_14785 PF13732 Domain of unknown function (DUF4162) LIT25_14790 PF13396 Phospholipase_D-nuclease N-terminal LIT25_14805 PF12146 Serine aminopeptidase, S33 LIT25_14845 PF01773 Na+ dependent nucleoside transporter N-terminus LIT25_14845 PF07662 Na+ dependent nucleoside transporter C-terminus LIT25_14860 PF08713 DNA alkylation repair enzyme LIT25_14865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LIT25_14865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LIT25_14870 PF00175 Oxidoreductase NAD-binding domain LIT25_14870 PF00667 FAD binding domain LIT25_14870 PF00258 Flavodoxin LIT25_14875 PF03466 LysR substrate binding domain LIT25_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT25_14895 PF16916 Dimerisation domain of Zinc Transporter LIT25_14895 PF01545 Cation efflux family LIT25_14905 PF06968 Biotin and Thiamin Synthesis associated domain LIT25_14905 PF04055 Radical SAM superfamily LIT25_14910 PF05698 Bacterial trigger factor protein (TF) C-terminus LIT25_14920 PF01544 CorA-like Mg2+ transporter protein LIT25_14925 PF00158 Sigma-54 interaction domain LIT25_14930 PF00202 Aminotransferase class-III LIT25_14935 PF00474 Sodium:solute symporter family LIT25_14940 PF13091 PLD-like domain LIT25_14945 PF05525 Branched-chain amino acid transport protein LIT25_14950 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LIT25_14950 PF11611 Domain of unknown function (DUF4352) LIT25_14955 PF00245 Alkaline phosphatase LIT25_14970 PF01209 ubiE/COQ5 methyltransferase family LIT25_14980 PF16244 Domain of unknown function (DUF4901) LIT25_15010 PF02416 mttA/Hcf106 family LIT25_15025 PF07561 Domain of Unknown Function (DUF1540) LIT25_15035 PF07690 Major Facilitator Superfamily LIT25_15045 PF13538 UvrD-like helicase C-terminal domain LIT25_15055 PF03845 Spore germination protein LIT25_15060 PF01370 NAD dependent epimerase/dehydratase family LIT25_15070 PF00005 ABC transporter LIT25_15075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_15075 PF00512 His Kinase A (phospho-acceptor) domain LIT25_15080 PF00072 Response regulator receiver domain LIT25_15080 PF00486 Transcriptional regulatory protein, C terminal LIT25_15090 PF00561 alpha/beta hydrolase fold LIT25_15100 PF00672 HAMP domain LIT25_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_15100 PF00512 His Kinase A (phospho-acceptor) domain LIT25_15105 PF00072 Response regulator receiver domain LIT25_15105 PF00486 Transcriptional regulatory protein, C terminal LIT25_15110 PF00005 ABC transporter LIT25_15115 PF02687 FtsX-like permease family LIT25_15120 PF13411 MerR HTH family regulatory protein LIT25_15125 PF00106 short chain dehydrogenase LIT25_15135 PF07687 Peptidase dimerisation domain LIT25_15135 PF01546 Peptidase family M20/M25/M40 LIT25_15140 PF03576 Peptidase family S58 LIT25_15145 PF12822 ECF transporter, substrate-specific component LIT25_15150 PF02361 Cobalt transport protein LIT25_15155 PF00005 ABC transporter LIT25_15160 PF00005 ABC transporter LIT25_15170 PF00171 Aldehyde dehydrogenase family LIT25_15175 PF00180 Isocitrate/isopropylmalate dehydrogenase LIT25_15180 PF00158 Sigma-54 interaction domain LIT25_15180 PF00989 PAS fold LIT25_15180 PF02954 Bacterial regulatory protein, Fis family LIT25_15185 PF04101 Glycosyltransferase family 28 C-terminal domain LIT25_15185 PF03033 Glycosyltransferase family 28 N-terminal domain LIT25_15190 PF03466 LysR substrate binding domain LIT25_15190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIT25_15195 PF00285 Citrate synthase, C-terminal domain LIT25_15210 PF00491 Arginase family LIT25_15215 PF00465 Iron-containing alcohol dehydrogenase LIT25_15220 PF00171 Aldehyde dehydrogenase family LIT25_15225 PF00324 Amino acid permease LIT25_15230 PF06445 GyrI-like small molecule binding domain LIT25_15230 PF13411 MerR HTH family regulatory protein LIT25_15235 PF00082 Subtilase family LIT25_15235 PF02225 PA domain LIT25_15235 PF05922 Peptidase inhibitor I9 LIT25_15235 PF13860 FlgD Ig-like domain LIT25_15250 PF00196 Bacterial regulatory proteins, luxR family LIT25_15250 PF00072 Response regulator receiver domain LIT25_15255 PF13492 GAF domain LIT25_15255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_15255 PF07730 Histidine kinase LIT25_15265 PF00392 Bacterial regulatory proteins, gntR family LIT25_15265 PF07729 FCD domain LIT25_15285 PF02567 Phenazine biosynthesis-like protein LIT25_15295 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LIT25_15325 PF04542 Sigma-70 region 2 LIT25_15325 PF08281 Sigma-70, region 4 LIT25_15335 PF00480 ROK family LIT25_15340 PF00294 pfkB family carbohydrate kinase LIT25_15345 PF01116 Fructose-bisphosphate aldolase class-II LIT25_15350 PF01380 SIS domain LIT25_15355 PF07702 UTRA domain LIT25_15355 PF00392 Bacterial regulatory proteins, gntR family LIT25_15360 PF05163 DinB family LIT25_15375 PF00005 ABC transporter LIT25_15375 PF00664 ABC transporter transmembrane region LIT25_15390 PF00176 SNF2 family N-terminal domain LIT25_15390 PF04434 SWIM zinc finger LIT25_15390 PF00271 Helicase conserved C-terminal domain LIT25_15395 PF01209 ubiE/COQ5 methyltransferase family LIT25_15400 PF10901 Protein of unknown function (DUF2690) LIT25_15405 PF10901 Protein of unknown function (DUF2690) LIT25_15410 PF00324 Amino acid permease LIT25_15415 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_15420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIT25_15430 PF00293 NUDIX domain LIT25_15435 PF00311 Phosphoenolpyruvate carboxylase LIT25_15450 PF01380 SIS domain LIT25_15455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIT25_15460 PF00356 Bacterial regulatory proteins, lacI family LIT25_15465 PF01081 KDPG and KHG aldolase LIT25_15470 PF07690 Major Facilitator Superfamily LIT25_15475 PF00294 pfkB family carbohydrate kinase LIT25_15485 PF03992 Antibiotic biosynthesis monooxygenase LIT25_15495 PF01047 MarR family LIT25_15505 PF13193 AMP-binding enzyme C-terminal domain LIT25_15505 PF00550 Phosphopantetheine attachment site LIT25_15505 PF00668 Condensation domain LIT25_15505 PF00501 AMP-binding enzyme LIT25_15510 PF00664 ABC transporter transmembrane region LIT25_15510 PF00005 ABC transporter LIT25_15515 PF00975 Thioesterase domain LIT25_15515 PF00550 Phosphopantetheine attachment site LIT25_15515 PF00668 Condensation domain LIT25_15515 PF00501 AMP-binding enzyme LIT25_15515 PF13193 AMP-binding enzyme C-terminal domain LIT25_15520 PF00668 Condensation domain LIT25_15520 PF16197 Ketoacyl-synthetase C-terminal extension LIT25_15520 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT25_15520 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT25_15520 PF00550 Phosphopantetheine attachment site LIT25_15520 PF00698 Acyl transferase domain LIT25_15525 PF00975 Thioesterase domain LIT25_15525 PF00668 Condensation domain LIT25_15525 PF00550 Phosphopantetheine attachment site LIT25_15525 PF00501 AMP-binding enzyme LIT25_15525 PF13193 AMP-binding enzyme C-terminal domain LIT25_15530 PF00975 Thioesterase domain LIT25_15540 PF00144 Beta-lactamase LIT25_15540 PF11954 Domain of unknown function (DUF3471) LIT25_15545 PF01648 4'-phosphopantetheinyl transferase superfamily LIT25_15550 PF05504 Spore germination B3/ GerAC like, C-terminal LIT25_15560 PF03323 Bacillus/Clostridium GerA spore germination protein LIT25_15565 PF03845 Spore germination protein LIT25_15570 PF00149 Calcineurin-like phosphoesterase LIT25_15585 PF00805 Pentapeptide repeats (8 copies) LIT25_15605 PF06039 Malate:quinone oxidoreductase (Mqo) LIT25_15610 PF00381 PTS HPr component phosphorylation site LIT25_15625 PF13732 Domain of unknown function (DUF4162) LIT25_15625 PF00005 ABC transporter LIT25_15630 PF00440 Bacterial regulatory proteins, tetR family LIT25_15630 PF13977 BetI-type transcriptional repressor, C-terminal LIT25_15640 PF02016 LD-carboxypeptidase N-terminal domain LIT25_15640 PF17676 LD-carboxypeptidase C-terminal domain LIT25_15645 PF13333 Integrase core domain LIT25_15645 PF00665 Integrase core domain LIT25_15655 PF07486 Cell Wall Hydrolase LIT25_15665 PF04073 Aminoacyl-tRNA editing domain LIT25_15670 PF02423 Ornithine cyclodeaminase/mu-crystallin family LIT25_15675 PF00083 Sugar (and other) transporter LIT25_15680 PF07702 UTRA domain LIT25_15680 PF00392 Bacterial regulatory proteins, gntR family LIT25_15685 PF08241 Methyltransferase domain LIT25_15695 PF00583 Acetyltransferase (GNAT) family LIT25_15720 PF02796 Helix-turn-helix domain of resolvase LIT25_15720 PF00665 Integrase core domain LIT25_15725 PF01695 IstB-like ATP binding protein LIT25_15740 PF10997 Alternate to MurJ LIT25_15745 PF00890 FAD binding domain LIT25_15755 PF01494 FAD binding domain LIT25_15770 PF07486 Cell Wall Hydrolase LIT25_15770 PF01471 Putative peptidoglycan binding domain LIT25_15775 PF01965 DJ-1/PfpI family LIT25_15785 PF02796 Helix-turn-helix domain of resolvase LIT25_15785 PF00239 Resolvase, N terminal domain LIT25_15805 PF01609 Transposase DDE domain LIT25_15810 PF01022 Bacterial regulatory protein, arsR family LIT25_15830 PF07690 Major Facilitator Superfamily LIT25_15835 PF00005 ABC transporter LIT25_15840 PF00005 ABC transporter LIT25_15845 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT25_15845 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_15850 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_15855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT25_15860 PF10100 Staphylopine dehydrogenase LIT25_15875 PF00239 Resolvase, N terminal domain LIT25_15875 PF02796 Helix-turn-helix domain of resolvase LIT25_15880 PF01526 Tn3 transposase DDE domain LIT25_15880 PF13700 Domain of unknown function (DUF4158) LIT25_15890 PF05163 DinB family LIT25_15905 PF03992 Antibiotic biosynthesis monooxygenase LIT25_15925 PF02796 Helix-turn-helix domain of resolvase LIT25_15925 PF00239 Resolvase, N terminal domain LIT25_15940 PF07883 Cupin domain LIT25_15945 PF00239 Resolvase, N terminal domain LIT25_15945 PF02796 Helix-turn-helix domain of resolvase LIT25_15955 PF03613 PTS system mannose/fructose/sorbose family IID component LIT25_15960 PF03609 PTS system sorbose-specific iic component LIT25_15965 PF03830 PTS system sorbose subfamily IIB component LIT25_15965 PF03610 PTS system fructose IIA component LIT25_15970 PF03610 PTS system fructose IIA component LIT25_15970 PF03830 PTS system sorbose subfamily IIB component LIT25_15975 PF04794 YdjC-like protein LIT25_15980 PF00480 ROK family LIT25_15985 PF00324 Amino acid permease LIT25_15990 PF00392 Bacterial regulatory proteins, gntR family LIT25_15990 PF07702 UTRA domain LIT25_16000 PF13580 SIS domain LIT25_16015 PF13700 Domain of unknown function (DUF4158) LIT25_16015 PF01526 Tn3 transposase DDE domain LIT25_16045 PF00665 Integrase core domain LIT25_16045 PF13276 HTH-like domain LIT25_16045 PF13333 Integrase core domain LIT25_16060 PF02525 Flavodoxin-like fold LIT25_16065 PF01638 HxlR-like helix-turn-helix LIT25_16090 PF00293 NUDIX domain LIT25_16095 PF07690 Major Facilitator Superfamily LIT25_16105 PF02683 Cytochrome C biogenesis protein transmembrane region LIT25_16120 PF00589 Phage integrase family LIT25_16120 PF02899 Phage integrase, N-terminal SAM-like domain LIT25_16140 PF03845 Spore germination protein LIT25_16145 PF03323 Bacillus/Clostridium GerA spore germination protein LIT25_16150 PF05504 Spore germination B3/ GerAC like, C-terminal LIT25_16165 PF07676 WD40-like Beta Propeller Repeat LIT25_16175 PF03992 Antibiotic biosynthesis monooxygenase LIT25_16240 PF13333 Integrase core domain LIT25_16240 PF00665 Integrase core domain LIT25_16240 PF13276 HTH-like domain LIT25_16255 PF13700 Domain of unknown function (DUF4158) LIT25_16255 PF01526 Tn3 transposase DDE domain LIT25_16270 PF08031 Berberine and berberine like LIT25_16270 PF01565 FAD binding domain LIT25_16340 PF00069 Protein kinase domain LIT25_16360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT25_16360 PF02824 TGS domain LIT25_16360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT25_16360 PF03129 Anticodon binding domain LIT25_16370 PF08386 TAP-like protein LIT25_16370 PF00561 alpha/beta hydrolase fold LIT25_16380 PF13676 TIR domain LIT25_16395 PF04299 Putative FMN-binding domain LIT25_16405 PF00313 'Cold-shock' DNA-binding domain LIT25_16420 PF00583 Acetyltransferase (GNAT) family LIT25_16425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_16430 PF01641 SelR domain LIT25_16430 PF01625 Peptide methionine sulfoxide reductase LIT25_16435 PF01047 MarR family LIT25_16445 PF12697 Alpha/beta hydrolase family LIT25_16460 PF17431 Uncharacterized YmpT-like LIT25_16465 PF13180 PDZ domain LIT25_16475 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) LIT25_16490 PF02630 SCO1/SenC LIT25_16500 PF02645 Uncharacterised protein, DegV family COG1307 LIT25_16505 PF10751 Protein of unknown function (DUF2535) LIT25_16510 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_16510 PF00585 C-terminal regulatory domain of Threonine dehydratase LIT25_16515 PF00158 Sigma-54 interaction domain LIT25_16515 PF08461 Ribonuclease R winged-helix domain LIT25_16520 PF03006 Haemolysin-III related LIT25_16525 PF00186 Dihydrofolate reductase LIT25_16530 PF00303 Thymidylate synthase LIT25_16535 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain LIT25_16545 PF03741 Integral membrane protein TerC family LIT25_16550 PF04608 Phosphatidylglycerophosphatase A LIT25_16555 PF14005 YpjP-like protein LIT25_16565 PF04445 Putative SAM-dependent methyltransferase LIT25_16570 PF06491 Disulphide isomerase LIT25_16575 PF00920 Dehydratase family LIT25_16580 PF00557 Metallopeptidase family M24 LIT25_16590 PF08712 Scaffold protein Nfu/NifU N terminal LIT25_16590 PF13769 Virulence factor LIT25_16595 PF01966 HD domain LIT25_16600 PF02645 Uncharacterised protein, DegV family COG1307 LIT25_16610 PF00255 Glutathione peroxidase LIT25_16620 PF01268 Formate--tetrahydrofolate ligase LIT25_16625 PF04204 Homoserine O-succinyltransferase LIT25_16630 PF00534 Glycosyl transferases group 1 LIT25_16630 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LIT25_16635 PF04307 LexA-binding, inner membrane-associated putative hydrolase LIT25_16650 PF01209 ubiE/COQ5 methyltransferase family LIT25_16670 PF00381 PTS HPr component phosphorylation site LIT25_16680 PF00313 'Cold-shock' DNA-binding domain LIT25_16690 PF10819 Protein of unknown function (DUF2564) LIT25_16695 PF10782 Zinc-finger LIT25_16705 PF13456 Reverse transcriptase-like LIT25_16720 PF13460 NAD(P)H-binding LIT25_16725 PF01367 5'-3' exonuclease, C-terminal SAM fold LIT25_16725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIT25_16735 PF10752 Protein of unknown function (DUF2533) LIT25_16745 PF00350 Dynamin family LIT25_16765 PF02080 TrkA-C domain LIT25_16775 PF02525 Flavodoxin-like fold LIT25_16790 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LIT25_16795 PF02797 Chalcone and stilbene synthases, C-terminal domain LIT25_16795 PF00195 Chalcone and stilbene synthases, N-terminal domain LIT25_16800 PF13302 Acetyltransferase (GNAT) domain LIT25_16810 PF17969 L,D-transpeptidase C-terminal domain LIT25_16810 PF03734 L,D-transpeptidase catalytic domain LIT25_16815 PF11514 Protein of unknown function (DUF3219) LIT25_16820 PF00860 Permease family LIT25_16825 PF00156 Phosphoribosyl transferase domain LIT25_16835 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LIT25_16840 PF13307 Helicase C-terminal domain LIT25_16850 PF02926 THUMP domain LIT25_16850 PF01170 Putative RNA methylase family UPF0020 LIT25_16860 PF05103 DivIVA protein LIT25_16865 PF06908 YspA SLOG family LIT25_16870 PF11122 Inner spore coat protein D LIT25_16880 PF13482 RNase_H superfamily LIT25_16900 PF00270 DEAD/DEAH box helicase LIT25_16900 PF09369 Domain of unknown function (DUF1998) LIT25_16900 PF00271 Helicase conserved C-terminal domain LIT25_16915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT25_16930 PF17334 Minor curli fiber component A LIT25_16945 PF14179 YppG-like protein LIT25_16975 PF10720 Protein of unknown function (DUF2515) LIT25_16980 PF03838 Recombination protein U LIT25_16985 PF00912 Transglycosylase LIT25_16985 PF00905 Penicillin binding protein transpeptidase domain LIT25_16995 PF10576 Iron-sulfur binding domain of endonuclease III LIT25_16995 PF00633 Helix-hairpin-helix motif LIT25_16995 PF00730 HhH-GPD superfamily base excision DNA repair protein LIT25_17000 PF07261 Replication initiation and membrane attachment LIT25_17005 PF00152 tRNA synthetases class II (D, K and N) LIT25_17005 PF01336 OB-fold nucleic acid binding domain LIT25_17010 PF00155 Aminotransferase class I and II LIT25_17020 PF14084 Protein of unknown function (DUF4264) LIT25_17025 PF04851 Type III restriction enzyme, res subunit LIT25_17025 PF00929 Exonuclease LIT25_17025 PF13307 Helicase C-terminal domain LIT25_17030 PF02261 Aspartate decarboxylase LIT25_17035 PF02569 Pantoate-beta-alanine ligase LIT25_17040 PF02548 Ketopantoate hydroxymethyltransferase LIT25_17045 PF02237 Biotin protein ligase C terminal domain LIT25_17045 PF03099 Biotin/lipoate A/B protein ligase family LIT25_17045 PF08279 HTH domain LIT25_17050 PF13735 tRNA nucleotidyltransferase domain 2 putative LIT25_17050 PF12627 Probable RNA and SrmB- binding site of polymerase A LIT25_17050 PF01743 Poly A polymerase head domain LIT25_17055 PF00534 Glycosyl transferases group 1 LIT25_17055 PF13439 Glycosyltransferase Family 4 LIT25_17060 PF02585 GlcNAc-PI de-N-acetylase LIT25_17065 PF02142 MGS-like domain LIT25_17070 PF05173 Dihydrodipicolinate reductase, C-terminus LIT25_17070 PF01113 Dihydrodipicolinate reductase, N-terminus LIT25_17075 PF03819 MazG nucleotide pyrophosphohydrolase domain LIT25_17080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_17080 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_17085 PF09577 Sporulation protein YpjB (SpoYpjB) LIT25_17090 PF07187 Protein of unknown function (DUF1405) LIT25_17095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIT25_17095 PF00032 Cytochrome b(C-terminal)/b6/petD LIT25_17100 PF00033 Cytochrome b/b6/petB LIT25_17105 PF00355 Rieske [2Fe-2S] domain LIT25_17110 PF10673 Protein of unknown function (DUF2487) LIT25_17120 PF03423 Carbohydrate binding domain (family 25) LIT25_17120 PF00128 Alpha amylase, catalytic domain LIT25_17120 PF01373 Glycosyl hydrolase family 14 LIT25_17125 PF08864 UPF0302 domain LIT25_17125 PF08858 IDEAL domain LIT25_17140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIT25_17145 PF01842 ACT domain LIT25_17145 PF02153 Prephenate dehydrogenase LIT25_17150 PF00155 Aminotransferase class I and II LIT25_17155 PF00290 Tryptophan synthase alpha chain LIT25_17160 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_17165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LIT25_17170 PF00218 Indole-3-glycerol phosphate synthase LIT25_17175 PF02885 Glycosyl transferase family, helical bundle domain LIT25_17175 PF00591 Glycosyl transferase family, a/b domain LIT25_17180 PF00425 chorismate binding enzyme LIT25_17180 PF04715 Anthranilate synthase component I, N terminal region LIT25_17185 PF07736 Chorismate mutase type I LIT25_17190 PF01761 3-dehydroquinate synthase LIT25_17195 PF01264 Chorismate synthase LIT25_17205 PF00334 Nucleoside diphosphate kinase LIT25_17210 PF00348 Polyprenyl synthetase LIT25_17215 PF01209 ubiE/COQ5 methyltransferase family LIT25_17220 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 LIT25_17225 PF02081 Tryptophan RNA-binding attenuator protein LIT25_17230 PF01227 GTP cyclohydrolase I LIT25_17235 PF00216 Bacterial DNA-binding protein LIT25_17240 PF09547 Stage IV sporulation protein A (spore_IV_A) LIT25_17250 PF10966 Protein of unknown function (DUF2768) LIT25_17255 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LIT25_17255 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LIT25_17260 PF01926 50S ribosome-binding GTPase LIT25_17260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LIT25_17270 PF14045 YIEGIA protein LIT25_17280 PF14140 YpzI-like protein LIT25_17285 PF01070 FMN-dependent dehydrogenase LIT25_17290 PF00575 S1 RNA binding domain LIT25_17300 PF02224 Cytidylate kinase LIT25_17305 PF17313 Family of unknown function (DUF5359) LIT25_17320 PF03413 Peptidase propeptide and YPEB domain LIT25_17320 PF14620 YpeB sporulation LIT25_17325 PF01471 Putative peptidoglycan binding domain LIT25_17325 PF07486 Cell Wall Hydrolase LIT25_17330 PF13367 PrsW family intramembrane metalloprotease LIT25_17335 PF00710 Asparaginase, N-terminal LIT25_17335 PF17763 Glutaminase/Asparaginase C-terminal domain LIT25_17355 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIT25_17355 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIT25_17360 PF05389 Negative regulator of genetic competence (MecA) LIT25_17365 PF13411 MerR HTH family regulatory protein LIT25_17390 PF02517 CPBP intramembrane metalloprotease LIT25_17395 PF00270 DEAD/DEAH box helicase LIT25_17395 PF00271 Helicase conserved C-terminal domain LIT25_17400 PF14493 Helix-turn-helix domain LIT25_17410 PF12822 ECF transporter, substrate-specific component LIT25_17415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT25_17415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT25_17415 PF01842 ACT domain LIT25_17420 PF00512 His Kinase A (phospho-acceptor) domain LIT25_17420 PF13426 PAS domain LIT25_17420 PF13188 PAS domain LIT25_17420 PF00989 PAS fold LIT25_17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_17425 PF02811 PHP domain LIT25_17430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LIT25_17430 PF01476 LysM domain LIT25_17440 PF08281 Sigma-70, region 4 LIT25_17440 PF04542 Sigma-70 region 2 LIT25_17445 PF01923 Cobalamin adenosyltransferase LIT25_17460 PF00672 HAMP domain LIT25_17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_17460 PF18698 Histidine kinase sensor domain LIT25_17460 PF00512 His Kinase A (phospho-acceptor) domain LIT25_17460 PF00989 PAS fold LIT25_17465 PF00072 Response regulator receiver domain LIT25_17465 PF00486 Transcriptional regulatory protein, C terminal LIT25_17470 PF01578 Cytochrome C assembly protein LIT25_17475 PF05140 ResB-like family LIT25_17480 PF00578 AhpC/TSA family LIT25_17485 PF00849 RNA pseudouridylate synthase LIT25_17485 PF01479 S4 domain LIT25_17490 PF07670 Nucleoside recognition LIT25_17495 PF07670 Nucleoside recognition LIT25_17500 PF07943 Penicillin-binding protein 5, C-terminal domain LIT25_17500 PF00768 D-alanyl-D-alanine carboxypeptidase LIT25_17505 PF13047 Protein of unknown function (DUF3907) LIT25_17515 PF04079 Segregation and condensation complex subunit ScpB LIT25_17520 PF02616 Segregation and condensation protein ScpA LIT25_17525 PF09680 Family of unknown function LIT25_17530 PF03745 Domain of unknown function (DUF309) LIT25_17535 PF00583 Acetyltransferase (GNAT) family LIT25_17540 PF00885 6,7-dimethyl-8-ribityllumazine synthase LIT25_17545 PF00925 GTP cyclohydrolase II LIT25_17545 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LIT25_17550 PF00677 Lumazine binding domain LIT25_17555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIT25_17555 PF01872 RibD C-terminal domain LIT25_17565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIT25_17570 PF06207 Protein of unknown function (DUF1002) LIT25_17575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LIT25_17575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LIT25_17580 PF03323 Bacillus/Clostridium GerA spore germination protein LIT25_17585 PF14097 Stage V sporulation protein AE1 LIT25_17590 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT25_17595 PF07451 Stage V sporulation protein AD (SpoVAD) LIT25_17600 PF03862 SpoVAC/SpoVAEB sporulation membrane protein LIT25_17605 PF13782 Stage V sporulation protein AB LIT25_17610 PF12164 Stage V sporulation protein AA LIT25_17615 PF04542 Sigma-70 region 2 LIT25_17615 PF04539 Sigma-70 region 3 LIT25_17615 PF04545 Sigma-70, region 4 LIT25_17620 PF13581 Histidine kinase-like ATPase domain LIT25_17625 PF01740 STAS domain LIT25_17630 PF07943 Penicillin-binding protein 5, C-terminal domain LIT25_17630 PF00768 D-alanyl-D-alanine carboxypeptidase LIT25_17635 PF02885 Glycosyl transferase family, helical bundle domain LIT25_17635 PF00591 Glycosyl transferase family, a/b domain LIT25_17635 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LIT25_17640 PF01048 Phosphorylase superfamily LIT25_17645 PF01676 Metalloenzyme superfamily LIT25_17650 PF02899 Phage integrase, N-terminal SAM-like domain LIT25_17650 PF00589 Phage integrase family LIT25_17655 PF14004 Protein of unknown function (DUF4227) LIT25_17660 PF01475 Ferric uptake regulator family LIT25_17665 PF01944 Stage II sporulation protein M LIT25_17685 PF00293 NUDIX domain LIT25_17690 PF13072 Mother cell inhibitor of FtsZ LIT25_17695 PF00248 Aldo/keto reductase family LIT25_17710 PF01476 LysM domain LIT25_17710 PF00877 NlpC/P60 family LIT25_17715 PF00253 Ribosomal protein S14p/S29e LIT25_17725 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT25_17725 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT25_17740 PF01144 Coenzyme A transferase LIT25_17745 PF01144 Coenzyme A transferase LIT25_17750 PF00108 Thiolase, N-terminal domain LIT25_17750 PF02803 Thiolase, C-terminal domain LIT25_17755 PF00682 HMGL-like LIT25_17765 PF12146 Serine aminopeptidase, S33 LIT25_17770 PF10827 Protein of unknown function (DUF2552) LIT25_17785 PF08863 YolD-like protein LIT25_17790 PF00817 impB/mucB/samB family LIT25_17790 PF11798 IMS family HHH motif LIT25_17790 PF11799 impB/mucB/samB family C-terminal domain LIT25_17800 PF00106 short chain dehydrogenase LIT25_17805 PF00753 Metallo-beta-lactamase superfamily LIT25_17810 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT25_17810 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT25_17830 PF01546 Peptidase family M20/M25/M40 LIT25_17835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LIT25_17845 PF00471 Ribosomal protein L33 LIT25_17855 PF00753 Metallo-beta-lactamase superfamily LIT25_17855 PF12706 Beta-lactamase superfamily domain LIT25_17860 PF00293 NUDIX domain LIT25_17860 PF13344 Haloacid dehalogenase-like hydrolase LIT25_17865 PF02311 AraC-like ligand binding domain LIT25_17865 PF12833 Helix-turn-helix domain LIT25_17875 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LIT25_17875 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LIT25_17880 PF07690 Major Facilitator Superfamily LIT25_17890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIT25_17890 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIT25_17895 PF11798 IMS family HHH motif LIT25_17895 PF11799 impB/mucB/samB family C-terminal domain LIT25_17895 PF00817 impB/mucB/samB family LIT25_17900 PF01625 Peptide methionine sulfoxide reductase LIT25_17905 PF07687 Peptidase dimerisation domain LIT25_17905 PF01546 Peptidase family M20/M25/M40 LIT25_17910 PF01039 Carboxyl transferase domain LIT25_17925 PF03734 L,D-transpeptidase catalytic domain LIT25_17930 PF06081 Aromatic acid exporter family member 1 LIT25_17930 PF11728 Putative aromatic acid exporter C-terminal domain LIT25_17935 PF00005 ABC transporter LIT25_17940 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_17945 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT25_17950 PF06491 Disulphide isomerase LIT25_17960 PF01642 Methylmalonyl-CoA mutase LIT25_17960 PF02310 B12 binding domain LIT25_17965 PF01642 Methylmalonyl-CoA mutase LIT25_17970 PF00781 Diacylglycerol kinase catalytic domain LIT25_17975 PF02817 e3 binding domain LIT25_17975 PF00364 Biotin-requiring enzyme LIT25_17975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIT25_17980 PF02779 Transketolase, pyrimidine binding domain LIT25_17980 PF02780 Transketolase, C-terminal domain LIT25_17985 PF00676 Dehydrogenase E1 component LIT25_17990 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_17990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT25_17995 PF00871 Acetokinase family LIT25_18000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIT25_18000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIT25_18005 PF01515 Phosphate acetyl/butaryl transferase LIT25_18010 PF00989 PAS fold LIT25_18010 PF00158 Sigma-54 interaction domain LIT25_18010 PF02954 Bacterial regulatory protein, Fis family LIT25_18015 PF11118 Protein of unknown function (DUF2627) LIT25_18020 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_18025 PF14174 YycC-like protein LIT25_18030 PF00072 Response regulator receiver domain LIT25_18030 PF08769 Sporulation initiation factor Spo0A C terminal LIT25_18035 PF17820 PDZ domain LIT25_18035 PF05580 SpoIVB peptidase S55 LIT25_18040 PF13476 AAA domain LIT25_18045 PF01316 Arginine repressor, DNA binding domain LIT25_18045 PF02863 Arginine repressor, C-terminal domain LIT25_18050 PF01728 FtsJ-like methyltransferase LIT25_18050 PF01479 S4 domain LIT25_18055 PF02779 Transketolase, pyrimidine binding domain LIT25_18055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LIT25_18055 PF02780 Transketolase, C-terminal domain LIT25_18060 PF00348 Polyprenyl synthetase LIT25_18065 PF02609 Exonuclease VII small subunit LIT25_18070 PF02601 Exonuclease VII, large subunit LIT25_18070 PF13742 OB-fold nucleic acid binding domain LIT25_18075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LIT25_18075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LIT25_18080 PF01029 NusB family LIT25_18085 PF03780 Asp23 family, cell envelope-related function LIT25_18090 PF02785 Biotin carboxylase C-terminal domain LIT25_18090 PF00289 Biotin carboxylase, N-terminal domain LIT25_18090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIT25_18095 PF00364 Biotin-requiring enzyme LIT25_18100 PF12685 SpoIIIAH-like protein LIT25_18110 PF09581 Stage III sporulation protein AF (Spore_III_AF) LIT25_18115 PF09546 Stage III sporulation protein AE (spore_III_AE) LIT25_18120 PF06686 Stage III sporulation protein AC/AD protein family LIT25_18125 PF06686 Stage III sporulation protein AC/AD protein family LIT25_18130 PF09548 Stage III sporulation protein AB (spore_III_AB) LIT25_18140 PF10942 Protein of unknown function (DUF2619) LIT25_18150 PF09285 Elongation factor P, C-terminal LIT25_18150 PF08207 Elongation factor P (EF-P) KOW-like domain LIT25_18150 PF01132 Elongation factor P (EF-P) OB domain LIT25_18155 PF01321 Creatinase/Prolidase N-terminal domain LIT25_18155 PF00557 Metallopeptidase family M24 LIT25_18160 PF01220 Dehydroquinase class II LIT25_18165 PF11085 Conserved membrane protein YqhR LIT25_18170 PF07136 Protein of unknown function (DUF1385) LIT25_18180 PF01734 Patatin-like phospholipase LIT25_18185 PF02742 Iron dependent repressor, metal binding and dimerisation domain LIT25_18185 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT25_18195 PF00317 Ribonucleotide reductase, all-alpha domain LIT25_18195 PF02867 Ribonucleotide reductase, barrel domain LIT25_18195 PF03477 ATP cone domain LIT25_18200 PF03099 Biotin/lipoate A/B protein ligase family LIT25_18205 PF00581 Rhodanese-like domain LIT25_18210 PF02347 Glycine cleavage system P-protein LIT25_18215 PF02347 Glycine cleavage system P-protein LIT25_18220 PF01571 Aminomethyltransferase folate-binding domain LIT25_18220 PF08669 Glycine cleavage T-protein C-terminal barrel domain LIT25_18225 PF00271 Helicase conserved C-terminal domain LIT25_18225 PF00176 SNF2 family N-terminal domain LIT25_18230 PF11079 Bacterial protein YqhG of unknown function LIT25_18240 PF01381 Helix-turn-helix LIT25_18240 PF08671 Anti-repressor SinI LIT25_18260 PF13028 Protein of unknown function (DUF3889) LIT25_18270 PF14038 YqzE-like protein LIT25_18275 PF01202 Shikimate kinase LIT25_18285 PF15980 Putative Competence protein ComGF LIT25_18295 PF07963 Prokaryotic N-terminal methylation motif LIT25_18300 PF07963 Prokaryotic N-terminal methylation motif LIT25_18305 PF00482 Type II secretion system (T2SS), protein F LIT25_18310 PF00437 Type II/IV secretion system protein LIT25_18355 PF00271 Helicase conserved C-terminal domain LIT25_18390 PF08486 Stage II sporulation protein LIT25_18400 PF07454 Stage II sporulation protein P (SpoIIP) LIT25_18575 PF00144 Beta-lactamase LIT25_18575 PF11954 Domain of unknown function (DUF3471) LIT25_18615 PF00580 UvrD/REP helicase N-terminal domain LIT25_18615 PF13361 UvrD-like helicase C-terminal domain LIT25_18665 PF03960 ArsC family LIT25_18670 PF11117 Protein of unknown function (DUF2626) LIT25_18680 PF00753 Metallo-beta-lactamase superfamily LIT25_18690 PF10958 Protein of unknown function (DUF2759) LIT25_18695 PF01910 Thiamine-binding protein LIT25_18705 PF01476 LysM domain LIT25_18705 PF00246 Zinc carboxypeptidase LIT25_18710 PF00884 Sulfatase LIT25_18715 PF00480 ROK family LIT25_18720 PF06014 Bacterial protein of unknown function (DUF910) LIT25_18725 PF01694 Rhomboid family LIT25_18740 PF01812 5-formyltetrahydrofolate cyclo-ligase family LIT25_18745 PF00471 Ribosomal protein L33 LIT25_18750 PF00483 Nucleotidyl transferase LIT25_18755 PF00534 Glycosyl transferases group 1 LIT25_18755 PF13439 Glycosyltransferase Family 4 LIT25_18775 PF01895 PhoU domain LIT25_18780 PF00005 ABC transporter LIT25_18785 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_18790 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_18795 PF12849 PBP superfamily domain LIT25_18800 PF03717 Penicillin-binding Protein dimerisation domain LIT25_18800 PF00905 Penicillin binding protein transpeptidase domain LIT25_18805 PF07690 Major Facilitator Superfamily LIT25_18810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIT25_18810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIT25_18815 PF04306 Protein of unknown function (DUF456) LIT25_18820 PF02690 Na+/Pi-cotransporter LIT25_18825 PF06691 Protein of unknown function (DUF1189) LIT25_18840 PF04551 GcpE protein LIT25_18855 PF01475 Ferric uptake regulator family LIT25_18860 PF00950 ABC 3 transport family LIT25_18865 PF00005 ABC transporter LIT25_18870 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_18870 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_18875 PF11116 Protein of unknown function (DUF2624) LIT25_18880 PF01261 Xylose isomerase-like TIM barrel LIT25_18885 PF00270 DEAD/DEAH box helicase LIT25_18885 PF00271 Helicase conserved C-terminal domain LIT25_18895 PF02401 LytB protein LIT25_18900 PF01784 NIF3 (NGG1p interacting factor 3) LIT25_18905 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LIT25_18910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIT25_18915 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_18915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_18915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_18920 PF03979 Sigma-70 factor, region 1.1 LIT25_18920 PF00140 Sigma-70 factor, region 1.2 LIT25_18920 PF04542 Sigma-70 region 2 LIT25_18920 PF04539 Sigma-70 region 3 LIT25_18920 PF04545 Sigma-70, region 4 LIT25_18925 PF10410 DnaB-helicase binding domain of primase LIT25_18925 PF08275 DNA primase catalytic core, N-terminal domain LIT25_18925 PF01807 CHC2 zinc finger LIT25_18930 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LIT25_18935 PF03618 Kinase/pyrophosphorylase LIT25_18940 PF00571 CBS domain LIT25_18940 PF08279 HTH domain LIT25_18945 PF02092 Glycyl-tRNA synthetase beta subunit LIT25_18950 PF02091 Glycyl-tRNA synthetase alpha subunit LIT25_18955 PF02565 Recombination protein O C terminal LIT25_18955 PF11967 Recombination protein O N terminal LIT25_18960 PF14006 YqzL-like protein LIT25_18965 PF07650 KH domain LIT25_18965 PF01926 50S ribosome-binding GTPase LIT25_18970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIT25_18975 PF01219 Prokaryotic diacylglycerol kinase LIT25_18980 PF02130 Uncharacterized protein family UPF0054 LIT25_18985 PF07698 7TM receptor with intracellular HD hydrolase LIT25_18985 PF07697 7TM-HD extracellular LIT25_18985 PF01966 HD domain LIT25_18990 PF02562 PhoH-like protein LIT25_18995 PF06898 Putative stage IV sporulation protein YqfD LIT25_19000 PF07873 YabP family LIT25_19010 PF12127 SigmaW regulon antibacterial LIT25_19015 PF01972 Serine dehydrogenase proteinase LIT25_19015 PF01957 NfeD-like C-terminal, partner-binding LIT25_19020 PF09424 Yqey-like protein LIT25_19025 PF01165 Ribosomal protein S21 LIT25_19030 PF02690 Na+/Pi-cotransporter LIT25_19035 PF01791 DeoC/LacD family aldolase LIT25_19040 PF01938 TRAM domain LIT25_19040 PF00919 Uncharacterized protein family UPF0004 LIT25_19040 PF04055 Radical SAM superfamily LIT25_19045 PF04452 RNA methyltransferase LIT25_19055 PF00226 DnaJ domain LIT25_19055 PF01556 DnaJ C terminal domain LIT25_19055 PF00684 DnaJ central domain LIT25_19060 PF00012 Hsp70 protein LIT25_19065 PF01025 GrpE LIT25_19070 PF01628 HrcA protein C terminal domain LIT25_19075 PF06969 HemN C-terminal domain LIT25_19075 PF04055 Radical SAM superfamily LIT25_19080 PF00679 Elongation factor G C-terminus LIT25_19080 PF00009 Elongation factor Tu GTP binding domain LIT25_19080 PF03144 Elongation factor Tu domain 2 LIT25_19080 PF06421 GTP-binding protein LepA C-terminus LIT25_19085 PF12438 Protein of unknown function (DUF3679) LIT25_19090 PF07454 Stage II sporulation protein P (SpoIIP) LIT25_19095 PF03418 Germination protease LIT25_19100 PF01649 Ribosomal protein S20 LIT25_19105 PF06144 DNA polymerase III, delta subunit LIT25_19110 PF14141 YqzM-like protein LIT25_19115 PF13567 Domain of unknown function (DUF4131) LIT25_19115 PF03772 Competence protein LIT25_19115 PF00753 Metallo-beta-lactamase superfamily LIT25_19120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIT25_19125 PF10531 SLBB domain LIT25_19130 PF03807 NADP oxidoreductase coenzyme F420-dependent LIT25_19130 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIT25_19135 PF13649 Methyltransferase domain LIT25_19145 PF01966 HD domain LIT25_19150 PF01467 Cytidylyltransferase-like LIT25_19155 PF01985 CRS1 / YhbY (CRM) domain LIT25_19160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LIT25_19160 PF01488 Shikimate / quinate 5-dehydrogenase LIT25_19160 PF08501 Shikimate dehydrogenase substrate binding domain LIT25_19165 PF01926 50S ribosome-binding GTPase LIT25_19175 PF08970 Sporulation inhibitor A LIT25_19180 PF02666 Phosphatidylserine decarboxylase LIT25_19185 PF01066 CDP-alcohol phosphatidyltransferase LIT25_19195 PF09501 Probable sporulation protein (Bac_small_yrzI) LIT25_19200 PF04545 Sigma-70, region 4 LIT25_19200 PF04542 Sigma-70 region 2 LIT25_19205 PF00657 GDSL-like Lipase/Acylhydrolase LIT25_19210 PF14143 YrhC-like protein LIT25_19215 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT25_19220 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_19225 PF01048 Phosphorylase superfamily LIT25_19230 PF13649 Methyltransferase domain LIT25_19235 PF10750 Protein of unknown function (DUF2536) LIT25_19240 PF07423 Domain of unknown function (DUF1510) LIT25_19245 PF03717 Penicillin-binding Protein dimerisation domain LIT25_19245 PF00905 Penicillin binding protein transpeptidase domain LIT25_19250 PF01272 Transcription elongation factor, GreA/GreB, C-term LIT25_19250 PF03449 Transcription elongation factor, N-terminal LIT25_19255 PF00485 Phosphoribulokinase / Uridine kinase family LIT25_19260 PF16325 Peptidase family U32 C-terminal domain LIT25_19260 PF01136 Peptidase family U32 LIT25_19265 PF01136 Peptidase family U32 LIT25_19270 PF01596 O-methyltransferase LIT25_19275 PF02618 YceG-like family LIT25_19280 PF06949 Protein of unknown function (DUF1292) LIT25_19285 PF03652 Holliday junction resolvase LIT25_19290 PF06135 IreB regulatory phosphoprotein LIT25_19295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT25_19295 PF02272 DHHA1 domain LIT25_19295 PF01411 tRNA synthetases class II (A) LIT25_19300 PF01594 AI-2E family transporter LIT25_19320 PF14490 Helix-hairpin-helix containing domain LIT25_19320 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LIT25_19320 PF13538 UvrD-like helicase C-terminal domain LIT25_19335 PF00266 Aminotransferase class-V LIT25_19340 PF02082 Transcriptional regulator LIT25_19350 PF12002 MgsA AAA+ ATPase C terminal LIT25_19350 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIT25_19350 PF16193 AAA C-terminal domain LIT25_19355 PF00899 ThiF family LIT25_19365 PF02938 GAD domain LIT25_19365 PF00152 tRNA synthetases class II (D, K and N) LIT25_19365 PF01336 OB-fold nucleic acid binding domain LIT25_19370 PF03129 Anticodon binding domain LIT25_19370 PF13393 Histidyl-tRNA synthetase LIT25_19380 PF08239 Bacterial SH3 domain LIT25_19380 PF01520 N-acetylmuramoyl-L-alanine amidase LIT25_19385 PF02580 D-Tyr-tRNA(Tyr) deacylase LIT25_19390 PF13291 ACT domain LIT25_19390 PF04607 Region found in RelA / SpoT proteins LIT25_19390 PF02824 TGS domain LIT25_19395 PF00156 Phosphoribosyl transferase domain LIT25_19400 PF02272 DHHA1 domain LIT25_19400 PF17768 RecJ OB domain LIT25_19400 PF01368 DHH family LIT25_19400 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LIT25_19405 PF06305 Lipopolysaccharide assembly protein A domain LIT25_19410 PF07549 SecD/SecF GG Motif LIT25_19410 PF02355 Protein export membrane protein LIT25_19420 PF01943 Polysaccharide biosynthesis protein LIT25_19420 PF14667 Polysaccharide biosynthesis C-terminal domain LIT25_19425 PF04239 Protein of unknown function (DUF421) LIT25_19430 PF12670 Protein of unknown function (DUF3792) LIT25_19435 PF02699 Preprotein translocase subunit LIT25_19440 PF01702 Queuine tRNA-ribosyltransferase LIT25_19445 PF02547 Queuosine biosynthesis protein LIT25_19450 PF11146 Protein of unknown function (DUF2905) LIT25_19455 PF05491 RuvB C-terminal winged helix domain LIT25_19455 PF17864 RuvB AAA lid domain LIT25_19455 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIT25_19460 PF07499 RuvA, C-terminal domain LIT25_19460 PF01330 RuvA N terminal domain LIT25_19465 PF08955 BofC C-terminal domain LIT25_19465 PF08977 Bypass of Forespore C, N terminal LIT25_19480 PF02445 Quinolinate synthetase A protein LIT25_19485 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LIT25_19485 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LIT25_19490 PF00890 FAD binding domain LIT25_19490 PF02910 Fumarate reductase flavoprotein C-term LIT25_19495 PF00266 Aminotransferase class-V LIT25_19500 PF02829 3H domain LIT25_19500 PF08279 HTH domain LIT25_19505 PF01842 ACT domain LIT25_19505 PF00800 Prephenate dehydratase LIT25_19510 PF01842 ACT domain LIT25_19515 PF09269 Domain of unknown function (DUF1967) LIT25_19515 PF01018 GTP1/OBG LIT25_19515 PF01926 50S ribosome-binding GTPase LIT25_19520 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LIT25_19520 PF14682 Sporulation initiation phospho-transferase B, C-terminal LIT25_19525 PF01016 Ribosomal L27 protein LIT25_19530 PF04327 Cysteine protease Prp LIT25_19535 PF00829 Ribosomal prokaryotic L21 protein LIT25_19540 PF10150 Ribonuclease E/G family LIT25_19540 PF00575 S1 RNA binding domain LIT25_19545 PF02163 Peptidase family M50 LIT25_19550 PF01551 Peptidase family M23 LIT25_19555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LIT25_19560 PF03775 Septum formation inhibitor MinC, C-terminal domain LIT25_19565 PF04093 rod shape-determining protein MreD LIT25_19570 PF04085 rod shape-determining protein MreC LIT25_19580 PF04002 RadC-like JAB domain LIT25_19585 PF02545 Maf-like protein LIT25_19615 PF06750 Bacterial Peptidase A24 N-terminal domain LIT25_19615 PF01478 Type IV leader peptidase family LIT25_19635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIT25_19635 PF01568 Molydopterin dinucleotide binding domain LIT25_19635 PF00384 Molybdopterin oxidoreductase LIT25_19665 PF07690 Major Facilitator Superfamily LIT25_19670 PF05384 Sensor protein DegS LIT25_19670 PF07730 Histidine kinase LIT25_19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_19675 PF00072 Response regulator receiver domain LIT25_19675 PF00196 Bacterial regulatory proteins, luxR family LIT25_19685 PF07730 Histidine kinase LIT25_19685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_19690 PF07694 5TMR of 5TMR-LYT LIT25_19690 PF00990 Diguanylate cyclase, GGDEF domain LIT25_19695 PF02875 Mur ligase family, glutamate ligase domain LIT25_19695 PF08245 Mur ligase middle domain LIT25_19700 PF08264 Anticodon-binding domain of tRNA LIT25_19700 PF00133 tRNA synthetases class I (I, L, M and V) LIT25_19700 PF10458 Valyl tRNA synthetase tRNA binding arm LIT25_19715 PF01476 LysM domain LIT25_19725 PF00202 Aminotransferase class-III LIT25_19730 PF00490 Delta-aminolevulinic acid dehydratase LIT25_19740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LIT25_19740 PF03900 Porphobilinogen deaminase, C-terminal domain LIT25_19745 PF01578 Cytochrome C assembly protein LIT25_19750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LIT25_19750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LIT25_19750 PF01488 Shikimate / quinate 5-dehydrogenase LIT25_19760 PF01926 50S ribosome-binding GTPase LIT25_19765 PF05362 Lon protease (S16) C-terminal proteolytic domain LIT25_19765 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_19765 PF02190 ATP-dependent protease La (LON) substrate-binding domain LIT25_19770 PF00004 ATPase family associated with various cellular activities (AAA) LIT25_19770 PF05362 Lon protease (S16) C-terminal proteolytic domain LIT25_19775 PF07724 AAA domain (Cdc48 subfamily) LIT25_19775 PF10431 C-terminal, D2-small domain, of ClpB protein LIT25_19775 PF06689 ClpX C4-type zinc finger LIT25_19780 PF05697 Bacterial trigger factor protein (TF) LIT25_19780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIT25_19780 PF05698 Bacterial trigger factor protein (TF) C-terminus LIT25_19790 PF00694 Aconitase C-terminal domain LIT25_19795 PF00330 Aconitase family (aconitate hydratase) LIT25_19800 PF00180 Isocitrate/isopropylmalate dehydrogenase LIT25_19805 PF08502 LeuA allosteric (dimerisation) domain LIT25_19805 PF00682 HMGL-like LIT25_19810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LIT25_19810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LIT25_19815 PF10369 Small subunit of acetolactate synthase LIT25_19815 PF01842 ACT domain LIT25_19820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT25_19820 PF00205 Thiamine pyrophosphate enzyme, central domain LIT25_19820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT25_19825 PF01063 Amino-transferase class IV LIT25_19835 PF12850 Calcineurin-like phosphoesterase superfamily domain LIT25_19840 PF01725 Ham1 family LIT25_19845 PF03725 3' exoribonuclease family, domain 2 LIT25_19845 PF01138 3' exoribonuclease family, domain 1 LIT25_19850 PF10646 Sporulation and spore germination LIT25_19855 PF01177 Asp/Glu/Hydantoin racemase LIT25_19860 PF01047 MarR family LIT25_19865 PF00196 Bacterial regulatory proteins, luxR family LIT25_19870 PF03061 Thioesterase superfamily LIT25_19875 PF13085 2Fe-2S iron-sulfur cluster binding domain LIT25_19875 PF13183 4Fe-4S dicluster domain LIT25_19880 PF00890 FAD binding domain LIT25_19880 PF02910 Fumarate reductase flavoprotein C-term LIT25_19885 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LIT25_19890 PF10702 Protein of unknown function (DUF2507) LIT25_19895 PF00696 Amino acid kinase family LIT25_19895 PF13840 ACT domain LIT25_19895 PF01842 ACT domain LIT25_19900 PF08459 UvrC Helix-hairpin-helix N-terminal LIT25_19900 PF01541 GIY-YIG catalytic domain LIT25_19900 PF02151 UvrB/uvrC motif LIT25_19905 PF00085 Thioredoxin LIT25_19910 PF00766 Electron transfer flavoprotein FAD-binding domain LIT25_19910 PF01012 Electron transfer flavoprotein domain LIT25_19915 PF01012 Electron transfer flavoprotein domain LIT25_19920 PF00378 Enoyl-CoA hydratase/isomerase LIT25_19925 PF08359 YsiA-like protein, C-terminal region LIT25_19925 PF00440 Bacterial regulatory proteins, tetR family LIT25_19930 PF00501 AMP-binding enzyme LIT25_19930 PF13193 AMP-binding enzyme C-terminal domain LIT25_19935 PF03994 Domain of Unknown Function (DUF350) LIT25_19940 PF00488 MutS domain V LIT25_19940 PF01713 Smr domain LIT25_19945 PF14716 Helix-hairpin-helix domain LIT25_19945 PF14791 DNA polymerase beta thumb LIT25_19945 PF02811 PHP domain LIT25_19950 PF02674 Colicin V production protein LIT25_19955 PF05164 Cell division protein ZapA LIT25_19960 PF11858 Domain of unknown function (DUF3378) LIT25_19960 PF01351 Ribonuclease HII LIT25_19970 PF02632 BioY family LIT25_19975 PF00202 Aminotransferase class-III LIT25_19980 PF01588 Putative tRNA binding domain LIT25_19980 PF03484 tRNA synthetase B5 domain LIT25_19980 PF03483 B3/4 domain LIT25_19980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LIT25_19980 PF03147 Ferredoxin-fold anticodon binding domain LIT25_19985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LIT25_19985 PF01409 tRNA synthetases class II core domain (F) LIT25_19990 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIT25_19990 PF00588 SpoU rRNA Methylase family LIT25_19995 PF14098 Small, acid-soluble spore protein I LIT25_20000 PF05343 M42 glutamyl aminopeptidase LIT25_20020 PF06961 Protein of unknown function (DUF1294) LIT25_20025 PF00453 Ribosomal protein L20 LIT25_20030 PF01632 Ribosomal protein L35 LIT25_20035 PF00707 Translation initiation factor IF-3, C-terminal domain LIT25_20035 PF05198 Translation initiation factor IF-3, N-terminal domain LIT25_20040 PF03129 Anticodon binding domain LIT25_20040 PF02824 TGS domain LIT25_20040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIT25_20040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIT25_20045 PF08812 YtxC-like family LIT25_20050 PF01695 IstB-like ATP binding protein LIT25_20050 PF07319 Primosomal protein DnaI N-terminus LIT25_20055 PF07261 Replication initiation and membrane attachment LIT25_20060 PF03477 ATP cone domain LIT25_20070 PF02675 S-adenosylmethionine decarboxylase LIT25_20075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIT25_20075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIT25_20080 PF01121 Dephospho-CoA kinase LIT25_20085 PF02659 Putative manganese efflux pump LIT25_20090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LIT25_20090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LIT25_20090 PF06827 Zinc finger found in FPG and IleRS LIT25_20095 PF01367 5'-3' exonuclease, C-terminal SAM fold LIT25_20095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIT25_20095 PF00476 DNA polymerase family A LIT25_20100 PF01145 SPFH domain / Band 7 family LIT25_20105 PF01145 SPFH domain / Band 7 family LIT25_20105 PF12221 Bacterial membrane protein N terminal LIT25_20110 PF16736 Single Cache-like LIT25_20110 PF00512 His Kinase A (phospho-acceptor) domain LIT25_20110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_20110 PF00989 PAS fold LIT25_20115 PF00072 Response regulator receiver domain LIT25_20115 PF00486 Transcriptional regulatory protein, C terminal LIT25_20125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIT25_20125 PF00056 lactate/malate dehydrogenase, NAD binding domain LIT25_20130 PF00180 Isocitrate/isopropylmalate dehydrogenase LIT25_20135 PF00285 Citrate synthase, C-terminal domain LIT25_20140 PF04284 Protein of unknown function (DUF441) LIT25_20145 PF01594 AI-2E family transporter LIT25_20150 PF04186 FxsA cytoplasmic membrane protein LIT25_20155 PF00391 PEP-utilising enzyme, mobile domain LIT25_20155 PF00224 Pyruvate kinase, barrel domain LIT25_20155 PF02887 Pyruvate kinase, alpha/beta domain LIT25_20160 PF00365 Phosphofructokinase LIT25_20165 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LIT25_20170 PF17848 Acetyl-coA carboxylase zinc finger domain LIT25_20170 PF01039 Carboxyl transferase domain LIT25_20175 PF00392 Bacterial regulatory proteins, gntR family LIT25_20180 PF03949 Malic enzyme, NAD binding domain LIT25_20180 PF00390 Malic enzyme, N-terminal domain LIT25_20185 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT25_20185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT25_20185 PF14579 Helix-hairpin-helix motif LIT25_20185 PF02811 PHP domain LIT25_20185 PF01336 OB-fold nucleic acid binding domain LIT25_20190 PF14034 Sporulation protein YtrH LIT25_20205 PF01368 DHH family LIT25_20205 PF02272 DHHA1 domain LIT25_20210 PF14007 YtpI-like protein LIT25_20215 PF00392 Bacterial regulatory proteins, gntR family LIT25_20215 PF03061 Thioesterase superfamily LIT25_20215 PF07085 DRTGG domain LIT25_20215 PF00571 CBS domain LIT25_20240 PF01548 Transposase LIT25_20240 PF02371 Transposase IS116/IS110/IS902 family LIT25_20255 PF00196 Bacterial regulatory proteins, luxR family LIT25_20255 PF00072 Response regulator receiver domain LIT25_20260 PF07730 Histidine kinase LIT25_20265 PF00144 Beta-lactamase LIT25_20275 PF00589 Phage integrase family LIT25_20275 PF14659 Phage integrase, N-terminal SAM-like domain LIT25_20280 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LIT25_20280 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIT25_20300 PF14698 Argininosuccinate lyase C-terminal LIT25_20300 PF00206 Lyase LIT25_20305 PF00764 Arginosuccinate synthase LIT25_20315 PF00994 Probable molybdopterin binding domain LIT25_20325 PF00871 Acetokinase family LIT25_20330 PF02384 N-6 DNA Methylase LIT25_20335 PF08534 Redoxin LIT25_20340 PF09579 Sporulation protein YtfJ (Spore_YtfJ) LIT25_20350 PF06271 RDD family LIT25_20355 PF01343 Peptidase family S49 LIT25_20360 PF01513 ATP-NAD kinase LIT25_20365 PF07969 Amidohydrolase family LIT25_20370 PF00501 AMP-binding enzyme LIT25_20370 PF13193 AMP-binding enzyme C-terminal domain LIT25_20380 PF00269 Small, acid-soluble spore proteins, alpha/beta type LIT25_20385 PF02568 Thiamine biosynthesis protein (ThiI) LIT25_20385 PF02926 THUMP domain LIT25_20390 PF00266 Aminotransferase class-V LIT25_20395 PF05525 Branched-chain amino acid transport protein LIT25_20400 PF06160 Septation ring formation regulator, EzrA LIT25_20405 PF02811 PHP domain LIT25_20410 PF00440 Bacterial regulatory proteins, tetR family LIT25_20415 PF13185 GAF domain LIT25_20420 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT25_20430 PF01479 S4 domain LIT25_20430 PF00163 Ribosomal protein S4/S9 N-terminal domain LIT25_20460 PF00144 Beta-lactamase LIT25_20465 PF01676 Metalloenzyme superfamily LIT25_20470 PF01168 Alanine racemase, N-terminal domain LIT25_20475 PF00155 Aminotransferase class I and II LIT25_20480 PF02126 Phosphotriesterase family LIT25_20485 PF10797 Protein of unknown function LIT25_20490 PF10941 Protein of unknown function DUF2620 LIT25_20500 PF14502 Helix-turn-helix domain LIT25_20500 PF14503 YhfZ C-terminal domain LIT25_20505 PF01479 S4 domain LIT25_20505 PF00579 tRNA synthetases class I (W and Y) LIT25_20510 PF00912 Transglycosylase LIT25_20510 PF00905 Penicillin binding protein transpeptidase domain LIT25_20515 PF13193 AMP-binding enzyme C-terminal domain LIT25_20515 PF00501 AMP-binding enzyme LIT25_20520 PF00583 Acetyltransferase (GNAT) family LIT25_20525 PF00571 CBS domain LIT25_20530 PF00850 Histone deacetylase domain LIT25_20535 PF00356 Bacterial regulatory proteins, lacI family LIT25_20540 PF01817 Chorismate mutase type II LIT25_20540 PF00793 DAHP synthetase I family LIT25_20555 PF11009 Protein of unknown function (DUF2847) LIT25_20565 PF06103 Bacterial protein of unknown function (DUF948) LIT25_20570 PF02073 Thermophilic metalloprotease (M29) LIT25_20580 PF01225 Mur ligase family, catalytic domain LIT25_20580 PF02875 Mur ligase family, glutamate ligase domain LIT25_20580 PF08245 Mur ligase middle domain LIT25_20585 PF17854 FtsK alpha domain LIT25_20585 PF09397 Ftsk gamma domain LIT25_20585 PF01580 FtsK/SpoIIIE family LIT25_20590 PF14794 Domain of unknown function (DUF4479) LIT25_20590 PF01588 Putative tRNA binding domain LIT25_20595 PF07285 Protein of unknown function (DUF1444) LIT25_20600 PF00085 Thioredoxin LIT25_20610 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ LIT25_20615 PF01931 Protein of unknown function DUF84 LIT25_20620 PF05343 M42 glutamyl aminopeptidase LIT25_20625 PF03413 Peptidase propeptide and YPEB domain LIT25_20630 PF00753 Metallo-beta-lactamase superfamily LIT25_20635 PF02390 Putative methyltransferase LIT25_20640 PF14165 YtzH-like protein LIT25_20645 PF01636 Phosphotransferase enzyme family LIT25_20650 PF00128 Alpha amylase, catalytic domain LIT25_20650 PF17999 Pullulanase N1-terminal domain LIT25_20650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIT25_20665 PF04172 LrgB-like family LIT25_20670 PF03788 LrgA family LIT25_20680 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_20685 PF12832 MFS_1 like family LIT25_20690 PF01546 Peptidase family M20/M25/M40 LIT25_20695 PF00860 Permease family LIT25_20700 PF08220 DeoR-like helix-turn-helix domain LIT25_20705 PF00849 RNA pseudouridylate synthase LIT25_20705 PF01479 S4 domain LIT25_20710 PF14667 Polysaccharide biosynthesis C-terminal domain LIT25_20710 PF01943 Polysaccharide biosynthesis protein LIT25_20720 PF10957 Sporulation protein Cse60 LIT25_20730 PF00581 Rhodanese-like domain LIT25_20735 PF09334 tRNA synthetases class I (M) LIT25_20735 PF08264 Anticodon-binding domain of tRNA LIT25_20735 PF00133 tRNA synthetases class I (I, L, M and V) LIT25_20735 PF13603 Leucyl-tRNA synthetase, Domain 2 LIT25_20740 PF14074 Protein of unknown function (DUF4257) LIT25_20745 PF07690 Major Facilitator Superfamily LIT25_20755 PF02687 FtsX-like permease family LIT25_20755 PF12704 MacB-like periplasmic core domain LIT25_20760 PF00005 ABC transporter LIT25_20770 PF00005 ABC transporter LIT25_20775 PF00392 Bacterial regulatory proteins, gntR family LIT25_20785 PF10732 Protein of unknown function (DUF2524) LIT25_20790 PF16199 Radical_SAM C-terminal domain LIT25_20790 PF04055 Radical SAM superfamily LIT25_20795 PF06962 Putative rRNA methylase LIT25_20805 PF10776 Protein of unknown function (DUF2600) LIT25_20810 PF12146 Serine aminopeptidase, S33 LIT25_20815 PF00132 Bacterial transferase hexapeptide (six repeats) LIT25_20820 PF01569 PAP2 superfamily LIT25_20825 PF00534 Glycosyl transferases group 1 LIT25_20825 PF13439 Glycosyltransferase Family 4 LIT25_20830 PF13537 Glutamine amidotransferase domain LIT25_20830 PF00733 Asparagine synthase LIT25_20835 PF02773 S-adenosylmethionine synthetase, C-terminal domain LIT25_20835 PF02772 S-adenosylmethionine synthetase, central domain LIT25_20835 PF00438 S-adenosylmethionine synthetase, N-terminal domain LIT25_20840 PF01293 Phosphoenolpyruvate carboxykinase LIT25_20855 PF10763 Protein of unknown function (DUF2584) LIT25_20860 PF00326 Prolyl oligopeptidase family LIT25_20870 PF00005 ABC transporter LIT25_20875 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_20880 PF00082 Subtilase family LIT25_20890 PF00293 NUDIX domain LIT25_20910 PF00210 Ferritin-like domain LIT25_20920 PF05922 Peptidase inhibitor I9 LIT25_20920 PF00082 Subtilase family LIT25_20930 PF03773 Predicted permease LIT25_20935 PF02649 Type I GTP cyclohydrolase folE2 LIT25_20940 PF00253 Ribosomal protein S14p/S29e LIT25_20955 PF01842 ACT domain LIT25_20955 PF00551 Formyl transferase LIT25_20960 PF02664 S-Ribosylhomocysteinase (LuxS) LIT25_20965 PF01809 Putative membrane protein insertion efficiency factor LIT25_20970 PF00484 Carbonic anhydrase LIT25_20975 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT25_20975 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT25_20980 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LIT25_20980 PF01297 Zinc-uptake complex component A periplasmic LIT25_20985 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT25_20985 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT25_20990 PF01197 Ribosomal protein L31 LIT25_20995 PF01654 Cytochrome bd terminal oxidase subunit I LIT25_21000 PF02322 Cytochrome bd terminal oxidase subunit II LIT25_21005 PF07561 Domain of Unknown Function (DUF1540) LIT25_21010 PF00950 ABC 3 transport family LIT25_21015 PF00950 ABC 3 transport family LIT25_21020 PF00005 ABC transporter LIT25_21025 PF01297 Zinc-uptake complex component A periplasmic LIT25_21030 PF13378 Enolase C-terminal domain-like LIT25_21030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT25_21035 PF00501 AMP-binding enzyme LIT25_21035 PF13193 AMP-binding enzyme C-terminal domain LIT25_21040 PF00378 Enoyl-CoA hydratase/isomerase LIT25_21045 PF00561 alpha/beta hydrolase fold LIT25_21050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT25_21050 PF16582 Middle domain of thiamine pyrophosphate LIT25_21050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT25_21055 PF00425 chorismate binding enzyme LIT25_21060 PF01040 UbiA prenyltransferase family LIT25_21065 PF01258 Prokaryotic dksA/traR C4-type zinc finger LIT25_21080 PF00343 Carbohydrate phosphorylase LIT25_21085 PF08323 Starch synthase catalytic domain LIT25_21085 PF00534 Glycosyl transferases group 1 LIT25_21090 PF00483 Nucleotidyl transferase LIT25_21095 PF00483 Nucleotidyl transferase LIT25_21100 PF02806 Alpha amylase, C-terminal all-beta domain LIT25_21100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIT25_21100 PF00128 Alpha amylase, catalytic domain LIT25_21225 PF00005 ABC transporter LIT25_21230 PF09084 NMT1/THI5 like LIT25_21235 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_21240 PF01910 Thiamine-binding protein LIT25_21245 PF09515 Thiamine transporter protein (Thia_YuaJ) LIT25_21260 PF00583 Acetyltransferase (GNAT) family LIT25_21280 PF00501 AMP-binding enzyme LIT25_21280 PF13193 AMP-binding enzyme C-terminal domain LIT25_21285 PF12867 DinB superfamily LIT25_21295 PF00589 Phage integrase family LIT25_21295 PF13495 Phage integrase, N-terminal SAM-like domain LIT25_21425 PF08141 Small acid-soluble spore protein H family LIT25_21430 PF00133 tRNA synthetases class I (I, L, M and V) LIT25_21430 PF08264 Anticodon-binding domain of tRNA LIT25_21475 PF07969 Amidohydrolase family LIT25_21480 PF11755 Protein of unknown function (DUF3311) LIT25_21485 PF00474 Sodium:solute symporter family LIT25_21490 PF02361 Cobalt transport protein LIT25_21495 PF00005 ABC transporter LIT25_21500 PF09819 ABC-type cobalt transport system, permease component LIT25_21505 PF03070 TENA/THI-4/PQQC family LIT25_21520 PF07690 Major Facilitator Superfamily LIT25_21535 PF00881 Nitroreductase family LIT25_21555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_21555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_21565 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_21570 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_21575 PF01547 Bacterial extracellular solute-binding protein LIT25_21580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_21580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_21585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_21585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_21590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_21600 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT25_21600 PF00480 ROK family LIT25_21605 PF00535 Glycosyl transferase family 2 LIT25_21615 PF05547 Immune inhibitor A peptidase M6 LIT25_21635 PF00753 Metallo-beta-lactamase superfamily LIT25_21655 PF00271 Helicase conserved C-terminal domain LIT25_21655 PF00270 DEAD/DEAH box helicase LIT25_21655 PF03880 DbpA RNA binding domain LIT25_21660 PF13378 Enolase C-terminal domain-like LIT25_21660 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT25_21670 PF01546 Peptidase family M20/M25/M40 LIT25_21670 PF07687 Peptidase dimerisation domain LIT25_21675 PF01418 Helix-turn-helix domain, rpiR family LIT25_21675 PF01380 SIS domain LIT25_21680 PF01476 LysM domain LIT25_21680 PF06725 3D domain LIT25_21700 PF01925 Sulfite exporter TauE/SafE LIT25_21705 PF06081 Aromatic acid exporter family member 1 LIT25_21710 PF13426 PAS domain LIT25_21710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_21710 PF00512 His Kinase A (phospho-acceptor) domain LIT25_21710 PF13188 PAS domain LIT25_21710 PF00989 PAS fold LIT25_21755 PF00080 Copper/zinc superoxide dismutase (SODC) LIT25_21760 PF01037 Lrp/AsnC ligand binding domain LIT25_21795 PF00753 Metallo-beta-lactamase superfamily LIT25_21800 PF01592 NifU-like N terminal domain LIT25_21805 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT25_21805 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT25_21815 PF07683 Cobalamin synthesis protein cobW C-terminal domain LIT25_21815 PF02492 CobW/HypB/UreG, nucleotide-binding domain LIT25_21820 PF01297 Zinc-uptake complex component A periplasmic LIT25_21825 PF00005 ABC transporter LIT25_21830 PF00950 ABC 3 transport family LIT25_21835 PF00692 dUTPase LIT25_21850 PF07690 Major Facilitator Superfamily LIT25_21855 PF01476 LysM domain LIT25_21855 PF03734 L,D-transpeptidase catalytic domain LIT25_21860 PF01593 Flavin containing amine oxidoreductase LIT25_21870 PF00144 Beta-lactamase LIT25_21880 PF00356 Bacterial regulatory proteins, lacI family LIT25_21880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIT25_21885 PF16655 PhoD-like phosphatase, N-terminal domain LIT25_21885 PF09423 PhoD-like phosphatase LIT25_21890 PF02416 mttA/Hcf106 family LIT25_21905 PF00067 Cytochrome P450 LIT25_21925 PF01704 UTP--glucose-1-phosphate uridylyltransferase LIT25_21935 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_21940 PF02801 Beta-ketoacyl synthase, C-terminal domain LIT25_21940 PF00109 Beta-ketoacyl synthase, N-terminal domain LIT25_21960 PF01979 Amidohydrolase family LIT25_21970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT25_21975 PF02378 Phosphotransferase system, EIIC LIT25_21980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIT25_21985 PF02056 Family 4 glycosyl hydrolase LIT25_21985 PF11975 Family 4 glycosyl hydrolase C-terminal domain LIT25_21995 PF07681 DoxX LIT25_22000 PF01435 Peptidase family M48 LIT25_22010 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT25_22010 PF14579 Helix-hairpin-helix motif LIT25_22010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT25_22010 PF00929 Exonuclease LIT25_22010 PF02811 PHP domain LIT25_22020 PF12833 Helix-turn-helix domain LIT25_22020 PF06445 GyrI-like small molecule binding domain LIT25_22025 PF00583 Acetyltransferase (GNAT) family LIT25_22040 PF00324 Amino acid permease LIT25_22050 PF00107 Zinc-binding dehydrogenase LIT25_22050 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_22065 PF00245 Alkaline phosphatase LIT25_22085 PF00324 Amino acid permease LIT25_22090 PF16655 PhoD-like phosphatase, N-terminal domain LIT25_22090 PF09423 PhoD-like phosphatase LIT25_22100 PF08141 Small acid-soluble spore protein H family LIT25_22110 PF00902 Sec-independent protein translocase protein (TatC) LIT25_22115 PF02416 mttA/Hcf106 family LIT25_22125 PF01638 HxlR-like helix-turn-helix LIT25_22130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_22130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_22135 PF02308 MgtC family LIT25_22140 PF00873 AcrB/AcrD/AcrF family LIT25_22145 PF00440 Bacterial regulatory proteins, tetR family LIT25_22165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIT25_22165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIT25_22170 PF00294 pfkB family carbohydrate kinase LIT25_22175 PF08220 DeoR-like helix-turn-helix domain LIT25_22175 PF00455 DeoR C terminal sensor domain LIT25_22180 PF00664 ABC transporter transmembrane region LIT25_22180 PF00005 ABC transporter LIT25_22195 PF00375 Sodium:dicarboxylate symporter family LIT25_22210 PF04199 Putative cyclase LIT25_22215 PF00266 Aminotransferase class-V LIT25_22220 PF03060 Nitronate monooxygenase LIT25_22230 PF06103 Bacterial protein of unknown function (DUF948) LIT25_22240 PF01894 Uncharacterised protein family UPF0047 LIT25_22245 PF00128 Alpha amylase, catalytic domain LIT25_22245 PF16657 Maltogenic Amylase, C-terminal domain LIT25_22250 PF00571 CBS domain LIT25_22250 PF03471 Transporter associated domain LIT25_22250 PF01595 Cyclin M transmembrane N-terminal domain LIT25_22260 PF11458 Membrane-integrating protein Mistic LIT25_22265 PF07885 Ion channel LIT25_22265 PF02254 TrkA-N domain LIT25_22270 PF08868 YugN-like family LIT25_22275 PF04463 Protein of unknown function (DUF523) LIT25_22295 PF00342 Phosphoglucose isomerase LIT25_22300 PF00465 Iron-containing alcohol dehydrogenase LIT25_22305 PF04070 Domain of unknown function (DUF378) LIT25_22310 PF00575 S1 RNA binding domain LIT25_22325 PF00155 Aminotransferase class I and II LIT25_22330 PF01037 Lrp/AsnC ligand binding domain LIT25_22335 PF08386 TAP-like protein LIT25_22335 PF00561 alpha/beta hydrolase fold LIT25_22345 PF00155 Aminotransferase class I and II LIT25_22360 PF00080 Copper/zinc superoxide dismutase (SODC) LIT25_22370 PF08810 Kinase associated protein B LIT25_22375 PF00929 Exonuclease LIT25_22380 PF07690 Major Facilitator Superfamily LIT25_22385 PF00912 Transglycosylase LIT25_22385 PF00905 Penicillin binding protein transpeptidase domain LIT25_22390 PF04134 Protein of unknown function, DUF393 LIT25_22395 PF17328 Family of unknown function (DUF5366) LIT25_22405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIT25_22405 PF00361 Proton-conducting membrane transporter LIT25_22405 PF13244 Domain of unknown function (DUF4040) LIT25_22410 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LIT25_22415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LIT25_22420 PF00361 Proton-conducting membrane transporter LIT25_22425 PF01899 Na+/H+ ion antiporter subunit LIT25_22430 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LIT25_22435 PF03334 Na+/H+ antiporter subunit LIT25_22445 PF13302 Acetyltransferase (GNAT) domain LIT25_22450 PF03061 Thioesterase superfamily LIT25_22455 PF07995 Glucose / Sorbosone dehydrogenase LIT25_22465 PF00196 Bacterial regulatory proteins, luxR family LIT25_22465 PF00072 Response regulator receiver domain LIT25_22470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_22470 PF07730 Histidine kinase LIT25_22475 PF05952 Bacillus competence pheromone ComX LIT25_22480 PF00348 Polyprenyl synthetase LIT25_22485 PF08181 DegQ (SacQ) family LIT25_22500 PF01470 Pyroglutamyl peptidase LIT25_22505 PF13460 NAD(P)H-binding LIT25_22510 PF01323 DSBA-like thioredoxin domain LIT25_22515 PF02082 Transcriptional regulator LIT25_22520 PF00248 Aldo/keto reductase family LIT25_22525 PF18801 response regulator aspartate phosphatase H, N terminal LIT25_22535 PF00082 Subtilase family LIT25_22540 PF07997 Protein of unknown function (DUF1694) LIT25_22550 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LIT25_22550 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LIT25_22555 PF01568 Molydopterin dinucleotide binding domain LIT25_22555 PF00384 Molybdopterin oxidoreductase LIT25_22555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LIT25_22560 PF00356 Bacterial regulatory proteins, lacI family LIT25_22565 PF00356 Bacterial regulatory proteins, lacI family LIT25_22575 PF01594 AI-2E family transporter LIT25_22585 PF03471 Transporter associated domain LIT25_22585 PF01595 Cyclin M transmembrane N-terminal domain LIT25_22585 PF00571 CBS domain LIT25_22590 PF13411 MerR HTH family regulatory protein LIT25_22595 PF09335 SNARE associated Golgi protein LIT25_22605 PF01966 HD domain LIT25_22625 PF00106 short chain dehydrogenase LIT25_22630 PF02872 5'-nucleotidase, C-terminal domain LIT25_22630 PF00149 Calcineurin-like phosphoesterase LIT25_22635 PF06018 CodY GAF-like domain LIT25_22635 PF17853 GGDEF-like domain LIT25_22635 PF13556 PucR C-terminal helix-turn-helix domain LIT25_22640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LIT25_22640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LIT25_22645 PF01323 DSBA-like thioredoxin domain LIT25_22650 PF00892 EamA-like transporter family LIT25_22655 PF08447 PAS fold LIT25_22655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_22655 PF00512 His Kinase A (phospho-acceptor) domain LIT25_22655 PF00989 PAS fold LIT25_22660 PF00174 Oxidoreductase molybdopterin binding domain LIT25_22665 PF02632 BioY family LIT25_22685 PF13726 Na+-H+ antiporter family LIT25_22685 PF03553 Na+/H+ antiporter family LIT25_22690 PF00883 Cytosol aminopeptidase family, catalytic domain LIT25_22690 PF02789 Cytosol aminopeptidase family, N-terminal domain LIT25_22700 PF02681 Divergent PAP2 family LIT25_22710 PF06725 3D domain LIT25_22715 PF14068 Putative membrane protein LIT25_22720 PF17302 Family of unknown function (DUF5351) LIT25_22725 PF13344 Haloacid dehalogenase-like hydrolase LIT25_22725 PF00293 NUDIX domain LIT25_22730 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_22735 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_22750 PF01521 Iron-sulphur cluster biosynthesis LIT25_22755 PF01678 Diaminopimelate epimerase LIT25_22765 PF07293 Protein of unknown function (DUF1450) LIT25_22770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_22775 PF02371 Transposase IS116/IS110/IS902 family LIT25_22775 PF01548 Transposase LIT25_22795 PF11553 Protein of unknown function (DUF3231) LIT25_22810 PF01726 LexA DNA binding domain LIT25_22810 PF00717 Peptidase S24-like LIT25_22815 PF07315 Protein of unknown function (DUF1462) LIT25_22825 PF00326 Prolyl oligopeptidase family LIT25_22825 PF07676 WD40-like Beta Propeller Repeat LIT25_22830 PF00288 GHMP kinases N terminal domain LIT25_22830 PF08544 GHMP kinases C terminal LIT25_22835 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_22840 PF03447 Homoserine dehydrogenase, NAD binding domain LIT25_22840 PF01842 ACT domain LIT25_22840 PF00742 Homoserine dehydrogenase LIT25_22850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIT25_22850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIT25_22860 PF04608 Phosphatidylglycerophosphatase A LIT25_22865 PF13344 Haloacid dehalogenase-like hydrolase LIT25_22870 PF01934 Protein of unknown function DUF86 LIT25_22885 PF06265 Protein of unknown function (DUF1027) LIT25_22890 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT25_22900 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LIT25_22900 PF04055 Radical SAM superfamily LIT25_22905 PF01551 Peptidase family M23 LIT25_22910 PF09560 Sporulation protein YunB (Spo_YunB) LIT25_22915 PF08827 Domain of unknown function (DUF1805) LIT25_22920 PF02872 5'-nucleotidase, C-terminal domain LIT25_22925 PF01925 Sulfite exporter TauE/SafE LIT25_22930 PF01904 Protein of unknown function DUF72 LIT25_22935 PF05922 Peptidase inhibitor I9 LIT25_22935 PF00082 Subtilase family LIT25_22940 PF00082 Subtilase family LIT25_22940 PF05922 Peptidase inhibitor I9 LIT25_22950 PF00082 Subtilase family LIT25_22950 PF02225 PA domain LIT25_22950 PF00746 LPXTG cell wall anchor motif LIT25_22950 PF06280 Fn3-like domain LIT25_22960 PF00746 LPXTG cell wall anchor motif LIT25_22960 PF02225 PA domain LIT25_22960 PF00082 Subtilase family LIT25_22960 PF06280 Fn3-like domain LIT25_22970 PF10924 Protein of unknown function (DUF2711) LIT25_22975 PF01458 Uncharacterized protein family (UPF0051) LIT25_22980 PF01592 NifU-like N terminal domain LIT25_22985 PF00266 Aminotransferase class-V LIT25_22990 PF01458 Uncharacterized protein family (UPF0051) LIT25_22995 PF00005 ABC transporter LIT25_23000 PF02627 Carboxymuconolactone decarboxylase family LIT25_23005 PF03180 NLPA lipoprotein LIT25_23010 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_23015 PF09383 NIL domain LIT25_23015 PF00005 ABC transporter LIT25_23020 PF01053 Cys/Met metabolism PLP-dependent enzyme LIT25_23030 PF00085 Thioredoxin LIT25_23035 PF01751 Toprim domain LIT25_23045 PF01597 Glycine cleavage H-protein LIT25_23050 PF03960 ArsC family LIT25_23055 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_23055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_23055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_23060 PF00108 Thiolase, N-terminal domain LIT25_23060 PF02803 Thiolase, C-terminal domain LIT25_23065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT25_23065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT25_23065 PF00378 Enoyl-CoA hydratase/isomerase LIT25_23075 PF01619 Proline dehydrogenase LIT25_23085 PF07875 Coat F domain LIT25_23090 PF07722 Peptidase C26 LIT25_23105 PF10835 Protein of unknown function (DUF2573) LIT25_23115 PF00005 ABC transporter LIT25_23120 PF01032 FecCD transport family LIT25_23125 PF01032 FecCD transport family LIT25_23130 PF01497 Periplasmic binding protein LIT25_23135 PF18158 Adaptive response protein AidB N-terminal domain LIT25_23135 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_23135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_23145 PF02386 Cation transport protein LIT25_23150 PF02080 TrkA-C domain LIT25_23150 PF02254 TrkA-N domain LIT25_23155 PF00486 Transcriptional regulatory protein, C terminal LIT25_23155 PF00072 Response regulator receiver domain LIT25_23160 PF00672 HAMP domain LIT25_23160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_23160 PF18698 Histidine kinase sensor domain LIT25_23160 PF00512 His Kinase A (phospho-acceptor) domain LIT25_23160 PF00989 PAS fold LIT25_23180 PF02416 mttA/Hcf106 family LIT25_23185 PF13520 Amino acid permease LIT25_23195 PF02702 Osmosensitive K+ channel His kinase sensor domain LIT25_23200 PF02669 K+-transporting ATPase, c chain LIT25_23210 PF03814 Potassium-transporting ATPase A subunit LIT25_23245 PF00375 Sodium:dicarboxylate symporter family LIT25_23260 PF07943 Penicillin-binding protein 5, C-terminal domain LIT25_23260 PF00768 D-alanyl-D-alanine carboxypeptidase LIT25_23270 PF00893 Small Multidrug Resistance protein LIT25_23275 PF00893 Small Multidrug Resistance protein LIT25_23290 PF08281 Sigma-70, region 4 LIT25_23290 PF04542 Sigma-70 region 2 LIT25_23295 PF00356 Bacterial regulatory proteins, lacI family LIT25_23300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_23300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_23305 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_23310 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_23315 PF01547 Bacterial extracellular solute-binding protein LIT25_23320 PF04854 Protein of unknown function, DUF624 LIT25_23330 PF00106 short chain dehydrogenase LIT25_23340 PF03180 NLPA lipoprotein LIT25_23345 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_23350 PF00005 ABC transporter LIT25_23350 PF09383 NIL domain LIT25_23360 PF12146 Serine aminopeptidase, S33 LIT25_23370 PF00291 Pyridoxal-phosphate dependent enzyme LIT25_23380 PF00455 DeoR C terminal sensor domain LIT25_23380 PF08220 DeoR-like helix-turn-helix domain LIT25_23385 PF08402 TOBE domain LIT25_23385 PF00005 ABC transporter LIT25_23390 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_23420 PF05175 Methyltransferase small domain LIT25_23420 PF17827 PrmC N-terminal domain LIT25_23460 PF00491 Arginase family LIT25_23465 PF07969 Amidohydrolase family LIT25_23470 PF01175 Urocanase Rossmann-like domain LIT25_23470 PF17392 Urocanase C-terminal domain LIT25_23470 PF17391 Urocanase N-terminal domain LIT25_23475 PF00221 Aromatic amino acid lyase LIT25_23480 PF09021 HutP LIT25_23485 PF06580 Histidine kinase LIT25_23485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_23485 PF07694 5TMR of 5TMR-LYT LIT25_23490 PF08245 Mur ligase middle domain LIT25_23490 PF01225 Mur ligase family, catalytic domain LIT25_23490 PF02875 Mur ligase family, glutamate ligase domain LIT25_23495 PF13180 PDZ domain LIT25_23500 PF00486 Transcriptional regulatory protein, C terminal LIT25_23500 PF00072 Response regulator receiver domain LIT25_23505 PF00672 HAMP domain LIT25_23505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_23505 PF00512 His Kinase A (phospho-acceptor) domain LIT25_23520 PF13276 HTH-like domain LIT25_23520 PF00665 Integrase core domain LIT25_23520 PF13333 Integrase core domain LIT25_23535 PF08220 DeoR-like helix-turn-helix domain LIT25_23535 PF00455 DeoR C terminal sensor domain LIT25_23540 PF00902 Sec-independent protein translocase protein (TatC) LIT25_23545 PF02416 mttA/Hcf106 family LIT25_23550 PF02368 Bacterial Ig-like domain (group 2) LIT25_23550 PF00754 F5/8 type C domain LIT25_23565 PF10415 Fumarase C C-terminus LIT25_23565 PF00206 Lyase LIT25_23590 PF00512 His Kinase A (phospho-acceptor) domain LIT25_23590 PF00989 PAS fold LIT25_23590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_23590 PF13426 PAS domain LIT25_23590 PF13188 PAS domain LIT25_23595 PF01964 Radical SAM ThiC family LIT25_23595 PF13667 ThiC-associated domain LIT25_23600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIT25_23600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_23615 PF01544 CorA-like Mg2+ transporter protein LIT25_23620 PF12679 ABC-2 family transporter protein LIT25_23625 PF00005 ABC transporter LIT25_23655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIT25_23655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIT25_23660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIT25_23660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIT25_23670 PF02447 GntP family permease LIT25_23680 PF01047 MarR family LIT25_23685 PF07690 Major Facilitator Superfamily LIT25_23690 PF03601 Conserved hypothetical protein 698 LIT25_23695 PF00578 AhpC/TSA family LIT25_23715 PF14480 DNA polymerase III polC-type N-terminus I LIT25_23715 PF11490 DNA polymerase III polC-type N-terminus II LIT25_23715 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIT25_23715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIT25_23715 PF02811 PHP domain LIT25_23715 PF00929 Exonuclease LIT25_23725 PF00909 Ammonium Transporter Family LIT25_23730 PF01022 Bacterial regulatory protein, arsR family LIT25_23735 PF16916 Dimerisation domain of Zinc Transporter LIT25_23735 PF01545 Cation efflux family LIT25_23740 PF00199 Catalase LIT25_23740 PF06628 Catalase-related immune-responsive LIT25_23750 PF12679 ABC-2 family transporter protein LIT25_23755 PF00005 ABC transporter LIT25_23765 PF03109 ABC1 family LIT25_23770 PF00440 Bacterial regulatory proteins, tetR family LIT25_23775 PF11724 YvbH-like oligomerisation region LIT25_23775 PF08000 Bacterial PH domain LIT25_23790 PF01925 Sulfite exporter TauE/SafE LIT25_23795 PF01206 Sulfurtransferase TusA LIT25_23800 PF00753 Metallo-beta-lactamase superfamily LIT25_23800 PF00581 Rhodanese-like domain LIT25_23805 PF00581 Rhodanese-like domain LIT25_23805 PF01206 Sulfurtransferase TusA LIT25_23810 PF00581 Rhodanese-like domain LIT25_23815 PF00581 Rhodanese-like domain LIT25_23815 PF17773 UPF0176 acylphosphatase like domain LIT25_23820 PF13686 DsrE/DsrF/DrsH-like family LIT25_23825 PF02583 Metal-sensitive transcriptional repressor LIT25_23840 PF01668 SmpB protein LIT25_23845 PF17876 Cold shock domain LIT25_23845 PF08206 Ribonuclease B OB domain LIT25_23845 PF00773 RNB domain LIT25_23845 PF00575 S1 RNA binding domain LIT25_23850 PF12146 Serine aminopeptidase, S33 LIT25_23855 PF03840 Preprotein translocase SecG subunit LIT25_23860 PF00892 EamA-like transporter family LIT25_23970 PF04860 Phage portal protein LIT25_23995 PF00589 Phage integrase family LIT25_23995 PF02899 Phage integrase, N-terminal SAM-like domain LIT25_24000 PF03952 Enolase, N-terminal domain LIT25_24000 PF00113 Enolase, C-terminal TIM barrel domain LIT25_24005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LIT25_24005 PF01676 Metalloenzyme superfamily LIT25_24010 PF00121 Triosephosphate isomerase LIT25_24015 PF00162 Phosphoglycerate kinase LIT25_24020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIT25_24020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIT25_24025 PF04198 Putative sugar-binding domain LIT25_24035 PF04552 Sigma-54, DNA binding domain LIT25_24035 PF00309 Sigma-54 factor, Activator interacting domain (AID) LIT25_24035 PF04963 Sigma-54 factor, core binding domain LIT25_24040 PF09628 YvfG protein LIT25_24060 PF00574 Clp protease LIT25_24065 PF00381 PTS HPr component phosphorylation site LIT25_24070 PF02650 WhiA C-terminal HTH domain LIT25_24070 PF14527 WhiA LAGLIDADG-like domain LIT25_24070 PF10298 WhiA N-terminal LAGLIDADG-like domain LIT25_24075 PF01933 Uncharacterised protein family UPF0052 LIT25_24080 PF03668 P-loop ATPase protein family LIT25_24085 PF00293 NUDIX domain LIT25_24090 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_24105 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LIT25_24105 PF01502 Phosphoribosyl-AMP cyclohydrolase LIT25_24110 PF00977 Histidine biosynthesis protein LIT25_24115 PF00977 Histidine biosynthesis protein LIT25_24120 PF00117 Glutamine amidotransferase class-I LIT25_24125 PF00475 Imidazoleglycerol-phosphate dehydratase LIT25_24130 PF00815 Histidinol dehydrogenase LIT25_24135 PF01634 ATP phosphoribosyltransferase LIT25_24140 PF13393 Histidyl-tRNA synthetase LIT25_24145 PF14602 Hexapeptide repeat of succinyl-transferase LIT25_24150 PF13419 Haloacid dehalogenase-like hydrolase LIT25_24155 PF07670 Nucleoside recognition LIT25_24160 PF01790 Prolipoprotein diacylglyceryl transferase LIT25_24165 PF07475 HPr Serine kinase C-terminal domain LIT25_24165 PF02603 HPr Serine kinase N terminus LIT25_24170 PF05036 Sporulation related domain LIT25_24170 PF01520 N-acetylmuramoyl-L-alanine amidase LIT25_24175 PF00149 Calcineurin-like phosphoesterase LIT25_24180 PF01741 Large-conductance mechanosensitive channel, MscL LIT25_24185 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LIT25_24195 PF13349 Putative adhesin LIT25_24205 PF00005 ABC transporter LIT25_24205 PF17755 UvrA DNA-binding domain LIT25_24205 PF17760 UvrA interaction domain LIT25_24210 PF00271 Helicase conserved C-terminal domain LIT25_24210 PF04851 Type III restriction enzyme, res subunit LIT25_24210 PF12344 Ultra-violet resistance protein B LIT25_24210 PF17757 UvrB interaction domain LIT25_24210 PF02151 UvrB/uvrC motif LIT25_24215 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) LIT25_24220 PF00009 Elongation factor Tu GTP binding domain LIT25_24220 PF03144 Elongation factor Tu domain 2 LIT25_24220 PF16658 Class II release factor RF3, C-terminal domain LIT25_24225 PF00512 His Kinase A (phospho-acceptor) domain LIT25_24225 PF00672 HAMP domain LIT25_24225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_24230 PF00072 Response regulator receiver domain LIT25_24230 PF00486 Transcriptional regulatory protein, C terminal LIT25_24235 PF02687 FtsX-like permease family LIT25_24235 PF12704 MacB-like periplasmic core domain LIT25_24240 PF00005 ABC transporter LIT25_24250 PF01040 UbiA prenyltransferase family LIT25_24265 PF13411 MerR HTH family regulatory protein LIT25_24265 PF07739 TipAS antibiotic-recognition domain LIT25_24270 PF17820 PDZ domain LIT25_24280 PF01471 Putative peptidoglycan binding domain LIT25_24280 PF03572 Peptidase family S41 LIT25_24280 PF17820 PDZ domain LIT25_24285 PF04225 Opacity-associated protein A LysM-like domain LIT25_24285 PF01551 Peptidase family M23 LIT25_24290 PF02687 FtsX-like permease family LIT25_24290 PF18075 FtsX extracellular domain LIT25_24295 PF00005 ABC transporter LIT25_24300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LIT25_24300 PF00032 Cytochrome b(C-terminal)/b6/petD LIT25_24305 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIT25_24305 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIT25_24315 PF07516 SecA Wing and Scaffold domain LIT25_24315 PF02810 SEC-C motif LIT25_24315 PF01043 SecA preprotein cross-linking domain LIT25_24315 PF07517 SecA DEAD-like domain LIT25_24320 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LIT25_24320 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LIT25_24335 PF02561 Flagellar protein FliS LIT25_24340 PF07195 Flagellar hook-associated protein 2 C-terminus LIT25_24340 PF02465 Flagellar hook-associated protein 2 N-terminus LIT25_24345 PF03646 FlaG protein LIT25_24350 PF00700 Bacterial flagellin C-terminal helical region LIT25_24350 PF00669 Bacterial flagellin N-terminal helical region LIT25_24355 PF02599 Global regulator protein family LIT25_24360 PF02623 FliW protein LIT25_24370 PF00669 Bacterial flagellin N-terminal helical region LIT25_24370 PF00700 Bacterial flagellin C-terminal helical region LIT25_24375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT25_24375 PF00460 Flagella basal body rod protein LIT25_24380 PF05130 FlgN protein LIT25_24385 PF04316 Anti-sigma-28 factor, FlgM LIT25_24400 PF10719 Late competence development protein ComFB LIT25_24405 PF00271 Helicase conserved C-terminal domain LIT25_24405 PF04851 Type III restriction enzyme, res subunit LIT25_24415 PF02645 Uncharacterised protein, DegV family COG1307 LIT25_24420 PF00196 Bacterial regulatory proteins, luxR family LIT25_24420 PF00072 Response regulator receiver domain LIT25_24425 PF07730 Histidine kinase LIT25_24425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_24425 PF05384 Sensor protein DegS LIT25_24430 PF01205 Uncharacterized protein family UPF0029 LIT25_24430 PF09186 Domain of unknown function (DUF1949) LIT25_24435 PF03816 Cell envelope-related transcriptional attenuator domain LIT25_24440 PF00953 Glycosyl transferase family 4 LIT25_24445 PF13439 Glycosyltransferase Family 4 LIT25_24445 PF00534 Glycosyl transferases group 1 LIT25_24455 PF02350 UDP-N-acetylglucosamine 2-epimerase LIT25_24460 PF13439 Glycosyltransferase Family 4 LIT25_24460 PF00534 Glycosyl transferases group 1 LIT25_24465 PF00005 ABC transporter LIT25_24465 PF01476 LysM domain LIT25_24470 PF01061 ABC-2 type transporter LIT25_24475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT25_24475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT25_24475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT25_24490 PF00535 Glycosyl transferase family 2 LIT25_24500 PF03816 Cell envelope-related transcriptional attenuator domain LIT25_24505 PF00535 Glycosyl transferase family 2 LIT25_24510 PF01522 Polysaccharide deacetylase LIT25_24525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT25_24525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT25_24525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT25_24530 PF00483 Nucleotidyl transferase LIT25_24535 PF04122 Putative cell wall binding repeat 2 LIT25_24535 PF08486 Stage II sporulation protein LIT25_24545 PF11741 AMIN domain LIT25_24545 PF01520 N-acetylmuramoyl-L-alanine amidase LIT25_24550 PF00082 Subtilase family LIT25_24550 PF06280 Fn3-like domain LIT25_24550 PF02225 PA domain LIT25_24550 PF00746 LPXTG cell wall anchor motif LIT25_24555 PF08486 Stage II sporulation protein LIT25_24555 PF04122 Putative cell wall binding repeat 2 LIT25_24565 PF00877 NlpC/P60 family LIT25_24565 PF01476 LysM domain LIT25_24575 PF03816 Cell envelope-related transcriptional attenuator domain LIT25_24580 PF07517 SecA DEAD-like domain LIT25_24580 PF01043 SecA preprotein cross-linking domain LIT25_24580 PF02810 SEC-C motif LIT25_24580 PF07516 SecA Wing and Scaffold domain LIT25_24600 PF04909 Amidohydrolase LIT25_24615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_24615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_24630 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_24635 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_24640 PF04854 Protein of unknown function, DUF624 LIT25_24645 PF02311 AraC-like ligand binding domain LIT25_24645 PF12833 Helix-turn-helix domain LIT25_24675 PF06452 Carbohydrate family 9 binding domain-like LIT25_24675 PF02018 Carbohydrate binding domain LIT25_24675 PF00395 S-layer homology domain LIT25_24675 PF00331 Glycosyl hydrolase family 10 LIT25_24680 PF00754 F5/8 type C domain LIT25_24680 PF02368 Bacterial Ig-like domain (group 2) LIT25_24685 PF08220 DeoR-like helix-turn-helix domain LIT25_24685 PF00455 DeoR C terminal sensor domain LIT25_24695 PF00480 ROK family LIT25_24720 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_24725 PF14716 Helix-hairpin-helix domain LIT25_24725 PF14791 DNA polymerase beta thumb LIT25_24725 PF02811 PHP domain LIT25_24730 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_24735 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_24745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIT25_24745 PF00356 Bacterial regulatory proteins, lacI family LIT25_24750 PF01238 Phosphomannose isomerase type I LIT25_24765 PF16363 GDP-mannose 4,6 dehydratase LIT25_24770 PF01370 NAD dependent epimerase/dehydratase family LIT25_24775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LIT25_24775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LIT25_24775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LIT25_24780 PF00534 Glycosyl transferases group 1 LIT25_24780 PF13439 Glycosyltransferase Family 4 LIT25_24785 PF00132 Bacterial transferase hexapeptide (six repeats) LIT25_24790 PF00132 Bacterial transferase hexapeptide (six repeats) LIT25_24795 PF03023 Lipid II flippase MurJ LIT25_24800 PF00534 Glycosyl transferases group 1 LIT25_24800 PF13439 Glycosyltransferase Family 4 LIT25_24805 PF00534 Glycosyl transferases group 1 LIT25_24805 PF13439 Glycosyltransferase Family 4 LIT25_24815 PF02397 Bacterial sugar transferase LIT25_24830 PF13614 AAA domain LIT25_24835 PF02706 Chain length determinant protein LIT25_24835 PF13807 G-rich domain on putative tyrosine kinase LIT25_24845 PF04434 SWIM zinc finger LIT25_24850 PF00271 Helicase conserved C-terminal domain LIT25_24850 PF12419 SNF2 Helicase protein LIT25_24850 PF00176 SNF2 family N-terminal domain LIT25_24855 PF00436 Single-strand binding protein family LIT25_24865 PF14183 YwpF-like protein LIT25_24880 PF07977 FabA-like domain LIT25_24890 PF00460 Flagella basal body rod protein LIT25_24890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT25_24895 PF00460 Flagella basal body rod protein LIT25_24895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LIT25_24905 PF12116 Stage III sporulation protein D LIT25_24910 PF01551 Peptidase family M23 LIT25_24920 PF00583 Acetyltransferase (GNAT) family LIT25_24925 PF08486 Stage II sporulation protein LIT25_24935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIT25_24940 PF08680 TATA-box binding LIT25_24945 PF06612 Protein of unknown function (DUF1146) LIT25_24950 PF00361 Proton-conducting membrane transporter LIT25_24955 PF00361 Proton-conducting membrane transporter LIT25_24960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LIT25_24960 PF00361 Proton-conducting membrane transporter LIT25_24960 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus LIT25_24965 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LIT25_24970 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LIT25_24980 PF00146 NADH dehydrogenase LIT25_24985 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LIT25_24990 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LIT25_24995 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LIT25_25000 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LIT25_25015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_25015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_25020 PF01266 FAD dependent oxidoreductase LIT25_25040 PF12833 Helix-turn-helix domain LIT25_25045 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LIT25_25045 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LIT25_25050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT25_25050 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIT25_25055 PF00231 ATP synthase LIT25_25060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT25_25060 PF00306 ATP synthase alpha/beta chain, C terminal domain LIT25_25060 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIT25_25065 PF00213 ATP synthase delta (OSCP) subunit LIT25_25070 PF00430 ATP synthase B/B' CF(0) LIT25_25075 PF00137 ATP synthase subunit C LIT25_25080 PF00119 ATP synthase A chain LIT25_25085 PF03899 ATP synthase I chain LIT25_25095 PF00082 Subtilase family LIT25_25095 PF05922 Peptidase inhibitor I9 LIT25_25095 PF02225 PA domain LIT25_25095 PF13860 FlgD Ig-like domain LIT25_25105 PF00128 Alpha amylase, catalytic domain LIT25_25105 PF00686 Starch binding domain LIT25_25105 PF01833 IPT/TIG domain LIT25_25105 PF02806 Alpha amylase, C-terminal all-beta domain LIT25_25110 PF02673 Bacitracin resistance protein BacA LIT25_25115 PF00464 Serine hydroxymethyltransferase LIT25_25120 PF04260 Protein of unknown function (DUF436) LIT25_25125 PF02502 Ribose/Galactose Isomerase LIT25_25130 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIT25_25135 PF02659 Putative manganese efflux pump LIT25_25140 PF01300 Telomere recombination LIT25_25140 PF03481 Putative GTP-binding controlling metal-binding LIT25_25150 PF09551 Stage II sporulation protein R (spore_II_R) LIT25_25160 PF13847 Methyltransferase domain LIT25_25160 PF17827 PrmC N-terminal domain LIT25_25165 PF03462 PCRF domain LIT25_25165 PF00472 RF-1 domain LIT25_25170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_25175 PF13411 MerR HTH family regulatory protein LIT25_25185 PF00265 Thymidine kinase LIT25_25190 PF01197 Ribosomal protein L31 LIT25_25195 PF07498 Rho termination factor, N-terminal domain LIT25_25195 PF07497 Rho termination factor, RNA-binding domain LIT25_25195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIT25_25200 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LIT25_25205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIT25_25210 PF00923 Transaldolase/Fructose-6-phosphate aldolase LIT25_25215 PF01116 Fructose-bisphosphate aldolase class-II LIT25_25220 PF00072 Response regulator receiver domain LIT25_25225 PF10740 Domain of unknown function (DUF2529) LIT25_25230 PF00117 Glutamine amidotransferase class-I LIT25_25230 PF06418 CTP synthase N-terminus LIT25_25235 PF05066 HB1, ASXL, restriction endonuclease HTH domain LIT25_25240 PF05816 Toxic anion resistance protein (TelA) LIT25_25245 PF14266 Putative component of 'biosynthetic module' LIT25_25280 PF02342 TerD domain LIT25_25285 PF02342 TerD domain LIT25_25295 PF02310 B12 binding domain LIT25_25295 PF01642 Methylmalonyl-CoA mutase LIT25_25305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_25305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_25305 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_25310 PF02770 Acyl-CoA dehydrogenase, middle domain LIT25_25310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LIT25_25310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LIT25_25315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LIT25_25315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LIT25_25320 PF00108 Thiolase, N-terminal domain LIT25_25320 PF02803 Thiolase, C-terminal domain LIT25_25325 PF02754 Cysteine-rich domain LIT25_25325 PF13183 4Fe-4S dicluster domain LIT25_25330 PF13091 PLD-like domain LIT25_25335 PF03851 UV-endonuclease UvdE LIT25_25340 PF03485 Arginyl tRNA synthetase N terminal domain LIT25_25340 PF00750 tRNA synthetases class I (R) LIT25_25340 PF05746 DALR anticodon binding domain LIT25_25345 PF09148 Domain of unknown function (DUF1934) LIT25_25350 PF00491 Arginase family LIT25_25355 PF17284 Spermidine synthase tetramerisation domain LIT25_25360 PF00912 Transglycosylase LIT25_25360 PF00905 Penicillin binding protein transpeptidase domain LIT25_25365 PF08741 YwhD family LIT25_25370 PF02163 Peptidase family M50 LIT25_25375 PF01361 Tautomerase enzyme LIT25_25385 PF01966 HD domain LIT25_25390 PF07293 Protein of unknown function (DUF1450) LIT25_25400 PF03099 Biotin/lipoate A/B protein ligase family LIT25_25405 PF01515 Phosphate acetyl/butaryl transferase LIT25_25410 PF06778 Chlorite dismutase LIT25_25430 PF04241 Protein of unknown function (DUF423) LIT25_25440 PF17261 Family of unknown function (DUF5327) LIT25_25445 PF11181 Heat induced stress protein YflT LIT25_25450 PF03167 Uracil DNA glycosylase superfamily LIT25_25455 PF01022 Bacterial regulatory protein, arsR family LIT25_25460 PF00106 short chain dehydrogenase LIT25_25465 PF00535 Glycosyl transferase family 2 LIT25_25470 PF11181 Heat induced stress protein YflT LIT25_25485 PF08361 MAATS-type transcriptional repressor, C-terminal region LIT25_25485 PF00440 Bacterial regulatory proteins, tetR family LIT25_25490 PF08543 Phosphomethylpyrimidine kinase LIT25_25495 PF00294 pfkB family carbohydrate kinase LIT25_25500 PF02417 Chromate transporter LIT25_25505 PF02417 Chromate transporter LIT25_25515 PF01037 Lrp/AsnC ligand binding domain LIT25_25515 PF13404 AsnC-type helix-turn-helix domain LIT25_25525 PF00881 Nitroreductase family LIT25_25530 PF07670 Nucleoside recognition LIT25_25540 PF17368 Spore morphogenesis and germination YwcE LIT25_25545 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LIT25_25550 PF00510 Cytochrome c oxidase subunit III LIT25_25555 PF00115 Cytochrome C and Quinol oxidase polypeptide I LIT25_25560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LIT25_25560 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LIT25_25565 PF01131 DNA topoisomerase LIT25_25565 PF01751 Toprim domain LIT25_25575 PF05569 BlaR1 peptidase M56 LIT25_25575 PF00905 Penicillin binding protein transpeptidase domain LIT25_25580 PF03965 Penicillinase repressor LIT25_25595 PF00005 ABC transporter LIT25_25595 PF12848 ABC transporter LIT25_25605 PF13171 Protein of unknown function (DUF4004) LIT25_25610 PF01636 Phosphotransferase enzyme family LIT25_25615 PF00270 DEAD/DEAH box helicase LIT25_25615 PF00271 Helicase conserved C-terminal domain LIT25_25620 PF00067 Cytochrome P450 LIT25_25630 PF09962 Uncharacterized conserved protein (DUF2196) LIT25_25650 PF13302 Acetyltransferase (GNAT) domain LIT25_25655 PF10672 S-adenosylmethionine-dependent methyltransferase LIT25_25655 PF17785 PUA-like domain LIT25_25685 PF00849 RNA pseudouridylate synthase LIT25_25685 PF01479 S4 domain LIT25_25690 PF17355 Family of unknown function (DUF5383) LIT25_25700 PF01580 FtsK/SpoIIIE family LIT25_25700 PF12538 DNA transporter LIT25_25705 PF10140 WXG100 protein secretion system (Wss), protein YukC LIT25_25710 PF08817 WXG100 protein secretion system (Wss), protein YukD LIT25_25715 PF06013 Proteins of 100 residues with WXG LIT25_25730 PF07687 Peptidase dimerisation domain LIT25_25730 PF01546 Peptidase family M20/M25/M40 LIT25_25735 PF00128 Alpha amylase, catalytic domain LIT25_25735 PF09154 Domain of unknown function (DUF1939) LIT25_25740 PF00672 HAMP domain LIT25_25740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_25740 PF00512 His Kinase A (phospho-acceptor) domain LIT25_25740 PF13426 PAS domain LIT25_25745 PF00072 Response regulator receiver domain LIT25_25745 PF00486 Transcriptional regulatory protein, C terminal LIT25_25755 PF02245 Methylpurine-DNA glycosylase (MPG) LIT25_25760 PF12833 Helix-turn-helix domain LIT25_25765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIT25_25765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIT25_25775 PF07687 Peptidase dimerisation domain LIT25_25775 PF01546 Peptidase family M20/M25/M40 LIT25_25780 PF00005 ABC transporter LIT25_25780 PF08402 TOBE domain LIT25_25785 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_25790 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_25795 PF13416 Bacterial extracellular solute-binding protein LIT25_25800 PF00183 Hsp90 protein LIT25_25805 PF01047 MarR family LIT25_25815 PF00486 Transcriptional regulatory protein, C terminal LIT25_25815 PF00072 Response regulator receiver domain LIT25_25820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_25825 PF00005 ABC transporter LIT25_25855 PF01588 Putative tRNA binding domain LIT25_25860 PF00892 EamA-like transporter family LIT25_25865 PF12833 Helix-turn-helix domain LIT25_25865 PF07883 Cupin domain LIT25_25870 PF00082 Subtilase family LIT25_25870 PF02225 PA domain LIT25_25870 PF05922 Peptidase inhibitor I9 LIT25_25870 PF13860 FlgD Ig-like domain LIT25_25875 PF07690 Major Facilitator Superfamily LIT25_25885 PF02590 Predicted SPOUT methyltransferase LIT25_25890 PF14116 YyzF-like protein LIT25_25895 PF13180 PDZ domain LIT25_25900 PF00753 Metallo-beta-lactamase superfamily LIT25_25905 PF09648 YycH protein LIT25_25915 PF00512 His Kinase A (phospho-acceptor) domain LIT25_25915 PF00672 HAMP domain LIT25_25915 PF13426 PAS domain LIT25_25915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_25920 PF00072 Response regulator receiver domain LIT25_25920 PF00486 Transcriptional regulatory protein, C terminal LIT25_25925 PF01476 LysM domain LIT25_25925 PF08525 Opacity-associated protein A N-terminal motif LIT25_25925 PF01551 Peptidase family M23 LIT25_25935 PF00709 Adenylosuccinate synthetase LIT25_25940 PF03796 DnaB-like helicase C terminal domain LIT25_25940 PF00772 DnaB-like helicase N terminal domain LIT25_25945 PF01281 Ribosomal protein L9, N-terminal domain LIT25_25945 PF03948 Ribosomal protein L9, C-terminal domain LIT25_25950 PF02272 DHHA1 domain LIT25_25950 PF01368 DHH family LIT25_25955 PF09991 Predicted membrane protein (DUF2232) LIT25_25960 PF01084 Ribosomal protein S18 LIT25_25965 PF00436 Single-strand binding protein family LIT25_25970 PF01250 Ribosomal protein S6 LIT25_25975 PF01926 50S ribosome-binding GTPase LIT25_25975 PF06071 Protein of unknown function (DUF933) LIT25_25980 PF06107 Bacterial protein of unknown function (DUF951) LIT25_25985 PF00924 Mechanosensitive ion channel LIT25_25990 PF06866 Protein of unknown function (DUF1256) LIT25_26000 PF02195 ParB-like nuclease domain LIT25_26000 PF17762 HTH domain found in ParB protein LIT25_26005 PF13614 AAA domain LIT25_26010 PF02195 ParB-like nuclease domain LIT25_26010 PF17762 HTH domain found in ParB protein LIT25_26015 PF02527 rRNA small subunit methyltransferase G LIT25_26020 PF01134 Glucose inhibited division protein A LIT25_26020 PF13932 GidA associated domain LIT25_26025 PF01926 50S ribosome-binding GTPase LIT25_26025 PF12631 MnmE helical domain LIT25_26025 PF10396 GTP-binding protein TrmE N-terminus LIT25_26030 PF01424 R3H domain LIT25_26030 PF14804 Jag N-terminus LIT25_26035 PF02096 60Kd inner membrane protein LIT25_26040 PF00825 Ribonuclease P LIT25_26045 PF00468 Ribosomal protein L34 LIT25_26055 PF01757 Acyltransferase family LIT25_26060 PF08281 Sigma-70, region 4 LIT25_26060 PF04542 Sigma-70 region 2 LIT25_26065 PF13739 Deacetylase PdaC LIT25_26065 PF11738 Protein of unknown function (DUF3298) LIT25_26070 PF00391 PEP-utilising enzyme, mobile domain LIT25_26070 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LIT25_26075 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LIT25_26075 PF00391 PEP-utilising enzyme, mobile domain LIT25_26120 PF01209 ubiE/COQ5 methyltransferase family LIT25_26130 PF02073 Thermophilic metalloprotease (M29) LIT25_26150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIT25_26150 PF00205 Thiamine pyrophosphate enzyme, central domain LIT25_26150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIT25_26160 PF07977 FabA-like domain LIT25_26165 PF02371 Transposase IS116/IS110/IS902 family LIT25_26165 PF01548 Transposase LIT25_26180 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT25_26185 PF03845 Spore germination protein LIT25_26195 PF01609 Transposase DDE domain LIT25_26200 PF04239 Protein of unknown function (DUF421) LIT25_26235 PF06280 Fn3-like domain LIT25_26235 PF00082 Subtilase family LIT25_26235 PF00746 LPXTG cell wall anchor motif LIT25_26235 PF02225 PA domain LIT25_26240 PF13860 FlgD Ig-like domain LIT25_26240 PF05922 Peptidase inhibitor I9 LIT25_26240 PF02225 PA domain LIT25_26240 PF00082 Subtilase family LIT25_26245 PF04002 RadC-like JAB domain LIT25_26260 PF06580 Histidine kinase LIT25_26260 PF00672 HAMP domain LIT25_26260 PF02743 Cache domain LIT25_26260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_26265 PF00072 Response regulator receiver domain LIT25_26265 PF12833 Helix-turn-helix domain LIT25_26275 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26280 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26285 PF07971 Glycosyl hydrolase family 92 LIT25_26285 PF17678 Glycosyl hydrolase family 92 N-terminal domain LIT25_26290 PF00356 Bacterial regulatory proteins, lacI family LIT25_26300 PF13229 Right handed beta helix region LIT25_26305 PF00005 ABC transporter LIT25_26310 PF02653 Branched-chain amino acid transport system / permease component LIT25_26335 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LIT25_26345 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT25_26350 PF05025 RbsD / FucU transport protein family LIT25_26370 PF00970 Oxidoreductase FAD-binding domain LIT25_26370 PF00042 Globin LIT25_26370 PF00175 Oxidoreductase NAD-binding domain LIT25_26385 PF05922 Peptidase inhibitor I9 LIT25_26385 PF00082 Subtilase family LIT25_26390 PF00155 Aminotransferase class I and II LIT25_26400 PF13649 Methyltransferase domain LIT25_26410 PF09423 PhoD-like phosphatase LIT25_26410 PF16655 PhoD-like phosphatase, N-terminal domain LIT25_26430 PF08220 DeoR-like helix-turn-helix domain LIT25_26430 PF00455 DeoR C terminal sensor domain LIT25_26445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIT25_26445 PF00056 lactate/malate dehydrogenase, NAD binding domain LIT25_26450 PF02652 L-lactate permease LIT25_26460 PF03009 Glycerophosphoryl diester phosphodiesterase family LIT25_26465 PF07702 UTRA domain LIT25_26465 PF00392 Bacterial regulatory proteins, gntR family LIT25_26490 PF08220 DeoR-like helix-turn-helix domain LIT25_26490 PF00455 DeoR C terminal sensor domain LIT25_26520 PF01609 Transposase DDE domain LIT25_26555 PF02416 mttA/Hcf106 family LIT25_26575 PF13610 DDE domain LIT25_26585 PF06280 Fn3-like domain LIT25_26585 PF00082 Subtilase family LIT25_26585 PF00746 LPXTG cell wall anchor motif LIT25_26585 PF02225 PA domain LIT25_26590 PF05922 Peptidase inhibitor I9 LIT25_26590 PF02225 PA domain LIT25_26590 PF00082 Subtilase family LIT25_26590 PF13860 FlgD Ig-like domain LIT25_26610 PF03830 PTS system sorbose subfamily IIB component LIT25_26610 PF03610 PTS system fructose IIA component LIT25_26615 PF03830 PTS system sorbose subfamily IIB component LIT25_26625 PF03613 PTS system mannose/fructose/sorbose family IID component LIT25_26630 PF07702 UTRA domain LIT25_26630 PF00392 Bacterial regulatory proteins, gntR family LIT25_26635 PF00754 F5/8 type C domain LIT25_26635 PF02368 Bacterial Ig-like domain (group 2) LIT25_26670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT25_26675 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26680 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT25_26680 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_26685 PF00005 ABC transporter LIT25_26690 PF00005 ABC transporter LIT25_26705 PF00403 Heavy-metal-associated domain LIT25_26730 PF02416 mttA/Hcf106 family LIT25_26740 PF00149 Calcineurin-like phosphoesterase LIT25_26745 PF02416 mttA/Hcf106 family LIT25_26750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIT25_26760 PF12833 Helix-turn-helix domain LIT25_26760 PF02311 AraC-like ligand binding domain LIT25_26765 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26770 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26775 PF01547 Bacterial extracellular solute-binding protein LIT25_26785 PF07470 Glycosyl Hydrolase Family 88 LIT25_26795 PF04854 Protein of unknown function, DUF624 LIT25_26800 PF04962 KduI/IolB family LIT25_26820 PF08348 YheO-like PAS domain LIT25_26820 PF13309 HTH domain LIT25_26825 PF01042 Endoribonuclease L-PSP LIT25_26830 PF07690 Major Facilitator Superfamily LIT25_26865 PF00239 Resolvase, N terminal domain LIT25_26865 PF02796 Helix-turn-helix domain of resolvase LIT25_26875 PF01638 HxlR-like helix-turn-helix LIT25_26885 PF02416 mttA/Hcf106 family LIT25_26890 PF01872 RibD C-terminal domain LIT25_26900 PF00293 NUDIX domain LIT25_26900 PF09297 NADH pyrophosphatase zinc ribbon domain LIT25_26900 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LIT25_26910 PF01301 Glycosyl hydrolases family 35 LIT25_26915 PF12833 Helix-turn-helix domain LIT25_26915 PF01497 Periplasmic binding protein LIT25_26920 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26925 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_26940 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain LIT25_26940 PF04616 Glycosyl hydrolases family 43 LIT25_26945 PF08305 NPCBM/NEW2 domain LIT25_26945 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase LIT25_26945 PF12905 Endo-alpha-N-acetylgalactosaminidase LIT25_26945 PF17451 Glycosyl hydrolase 101 beta sandwich domain LIT25_26945 PF17974 Galactose-binding domain-like LIT25_26945 PF18080 Galactose mutarotase-like fold domain LIT25_26970 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIT25_26970 PF00753 Metallo-beta-lactamase superfamily LIT25_27010 PF13276 HTH-like domain LIT25_27010 PF01527 Transposase LIT25_27010 PF00665 Integrase core domain LIT25_27010 PF13333 Integrase core domain LIT25_27015 PF13276 HTH-like domain LIT25_27015 PF00665 Integrase core domain LIT25_27015 PF13333 Integrase core domain LIT25_27025 PF00082 Subtilase family LIT25_27025 PF13860 FlgD Ig-like domain LIT25_27025 PF02225 PA domain LIT25_27025 PF05922 Peptidase inhibitor I9 LIT25_27070 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) LIT25_27075 PF00356 Bacterial regulatory proteins, lacI family LIT25_27090 PF08402 TOBE domain LIT25_27090 PF00005 ABC transporter LIT25_27095 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_27115 PF01695 IstB-like ATP binding protein LIT25_27130 PF16655 PhoD-like phosphatase, N-terminal domain LIT25_27130 PF09423 PhoD-like phosphatase LIT25_27145 PF00582 Universal stress protein family LIT25_27155 PF00005 ABC transporter LIT25_27165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIT25_27165 PF00512 His Kinase A (phospho-acceptor) domain LIT25_27170 PF00072 Response regulator receiver domain LIT25_27170 PF00486 Transcriptional regulatory protein, C terminal LIT25_27180 PF00005 ABC transporter LIT25_27205 PF00072 Response regulator receiver domain LIT25_27205 PF01339 CheB methylesterase LIT25_27215 PF00005 ABC transporter LIT25_27240 PF01925 Sulfite exporter TauE/SafE LIT25_27245 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIT25_27265 PF00753 Metallo-beta-lactamase superfamily LIT25_27265 PF16123 Hydroxyacylglutathione hydrolase C-terminus LIT25_27275 PF12320 Type 5 capsule protein repressor C-terminal domain LIT25_27275 PF00149 Calcineurin-like phosphoesterase LIT25_27285 PF02661 Fic/DOC family LIT25_27285 PF13784 Fic/DOC family N-terminal LIT25_27290 PF06874 Firmicute fructose-1,6-bisphosphatase LIT25_27295 PF01758 Sodium Bile acid symporter family LIT25_27300 PF00239 Resolvase, N terminal domain LIT25_27300 PF02796 Helix-turn-helix domain of resolvase LIT25_27340 PF00158 Sigma-54 interaction domain LIT25_27340 PF13426 PAS domain LIT25_27340 PF02954 Bacterial regulatory protein, Fis family LIT25_27350 PF02347 Glycine cleavage system P-protein LIT25_27355 PF02347 Glycine cleavage system P-protein LIT25_27365 PF01546 Peptidase family M20/M25/M40 LIT25_27370 PF00155 Aminotransferase class I and II LIT25_27375 PF03812 2-keto-3-deoxygluconate permease LIT25_27385 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIT25_27390 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_27395 PF00005 ABC transporter LIT25_27405 PF00581 Rhodanese-like domain LIT25_27410 PF07690 Major Facilitator Superfamily LIT25_27420 PF07171 MlrC C-terminus LIT25_27420 PF07364 Metallopeptidase family M81 LIT25_27425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIT25_27430 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_27435 PF12911 N-terminal TM domain of oligopeptide transport permease C LIT25_27435 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_27440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_27440 PF00005 ABC transporter LIT25_27445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIT25_27445 PF00005 ABC transporter LIT25_27450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT25_27450 PF13378 Enolase C-terminal domain-like LIT25_27460 PF07687 Peptidase dimerisation domain LIT25_27460 PF01546 Peptidase family M20/M25/M40 LIT25_27465 PF07676 WD40-like Beta Propeller Repeat LIT25_27465 PF00326 Prolyl oligopeptidase family LIT25_27470 PF00144 Beta-lactamase LIT25_27470 PF11954 Domain of unknown function (DUF3471) LIT25_27485 PF07969 Amidohydrolase family LIT25_27495 PF00356 Bacterial regulatory proteins, lacI family LIT25_27500 PF01547 Bacterial extracellular solute-binding protein LIT25_27505 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_27510 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_27515 PF00128 Alpha amylase, catalytic domain LIT25_27515 PF16657 Maltogenic Amylase, C-terminal domain LIT25_27525 PF04041 beta-1,4-mannooligosaccharide phosphorylase LIT25_27535 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_27535 PF16912 Glucose dehydrogenase C-terminus LIT25_27545 PF00480 ROK family LIT25_27550 PF01238 Phosphomannose isomerase type I LIT25_27595 PF11553 Protein of unknown function (DUF3231) LIT25_27615 PF04346 Ethanolamine utilisation protein, EutH LIT25_27620 PF01321 Creatinase/Prolidase N-terminal domain LIT25_27620 PF00557 Metallopeptidase family M24 LIT25_27625 PF01321 Creatinase/Prolidase N-terminal domain LIT25_27625 PF00557 Metallopeptidase family M24 LIT25_27630 PF00158 Sigma-54 interaction domain LIT25_27630 PF00072 Response regulator receiver domain LIT25_27630 PF02954 Bacterial regulatory protein, Fis family LIT25_27645 PF00999 Sodium/hydrogen exchanger family LIT25_27650 PF02386 Cation transport protein LIT25_27655 PF02080 TrkA-C domain LIT25_27655 PF02254 TrkA-N domain LIT25_27660 PF01544 CorA-like Mg2+ transporter protein LIT25_27670 PF00753 Metallo-beta-lactamase superfamily LIT25_27680 PF00440 Bacterial regulatory proteins, tetR family LIT25_27700 PF08708 Primase C terminal 1 (PriCT-1) LIT25_27740 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LIT25_27740 PF01348 Type II intron maturase LIT25_27745 PF00589 Phage integrase family LIT25_27745 PF13495 Phage integrase, N-terminal SAM-like domain LIT25_27755 PF01325 Iron dependent repressor, N-terminal DNA binding domain LIT25_27755 PF00480 ROK family LIT25_27760 PF01869 BadF/BadG/BcrA/BcrD ATPase family LIT25_27765 PF14698 Argininosuccinate lyase C-terminal LIT25_27765 PF00206 Lyase LIT25_27775 PF00528 Binding-protein-dependent transport system inner membrane component LIT25_27780 PF08402 TOBE domain LIT25_27780 PF00005 ABC transporter LIT25_27790 PF00480 ROK family LIT25_27800 PF03301 Tryptophan 2,3-dioxygenase LIT25_27805 PF00324 Amino acid permease LIT25_27810 PF00266 Aminotransferase class-V LIT25_27825 PF02028 BCCT, betaine/carnitine/choline family transporter LIT25_27830 PF00107 Zinc-binding dehydrogenase LIT25_27830 PF08240 Alcohol dehydrogenase GroES-like domain LIT25_27835 PF00171 Aldehyde dehydrogenase family LIT25_27845 PF01614 Bacterial transcriptional regulator LIT25_27845 PF09339 IclR helix-turn-helix domain LIT25_27870 PF00440 Bacterial regulatory proteins, tetR family LIT25_27880 PF07836 DmpG-like communication domain LIT25_27880 PF00682 HMGL-like LIT25_27885 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIT25_27885 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LIT25_27890 PF01557 Fumarylacetoacetate (FAA) hydrolase family LIT25_27895 PF00171 Aldehyde dehydrogenase family LIT25_27900 PF01042 Endoribonuclease L-PSP LIT25_27910 PF06052 3-hydroxyanthranilic acid dioxygenase LIT25_27915 PF01361 Tautomerase enzyme LIT25_27920 PF03358 NADPH-dependent FMN reductase LIT25_27925 PF06574 FAD synthetase LIT25_27930 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LIT25_27930 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LIT25_27935 PF07690 Major Facilitator Superfamily LIT25_27985 PF13614 AAA domain LIT25_28005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIT25_28010 PF00874 PRD domain LIT25_28010 PF03123 CAT RNA binding domain LIT25_28015 PF00367 phosphotransferase system, EIIB LIT25_28015 PF02378 Phosphotransferase system, EIIC LIT25_28025 PF02583 Metal-sensitive transcriptional repressor LIT25_28030 PF01554 MatE LIT25_28035 PF00392 Bacterial regulatory proteins, gntR family LIT25_28035 PF07729 FCD domain LIT25_28040 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain LIT25_28050 PF02361 Cobalt transport protein LIT25_28055 PF00005 ABC transporter LIT25_28060 PF13302 Acetyltransferase (GNAT) domain LIT25_28070 PF03606 C4-dicarboxylate anaerobic carrier LIT25_28075 PF07687 Peptidase dimerisation domain LIT25_28075 PF01546 Peptidase family M20/M25/M40 LIT25_28080 PF13378 Enolase C-terminal domain-like LIT25_28080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LIT25_28100 PF00202 Aminotransferase class-III LIT25_28105 PF00171 Aldehyde dehydrogenase family