locus-tag class description CU648_00005 PF00892 EamA-like transporter family CU648_00010 PF00392 Bacterial regulatory proteins, gntR family CU648_00010 PF00155 Aminotransferase class I and II CU648_00015 PF00561 alpha/beta hydrolase fold CU648_00045 PF06081 Aromatic acid exporter family member 1 CU648_00060 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CU648_00065 PF03413 Peptidase propeptide and YPEB domain CU648_00065 PF14620 YpeB sporulation CU648_00070 PF07486 Cell Wall Hydrolase CU648_00070 PF01471 Putative peptidoglycan binding domain CU648_00085 PF03301 Tryptophan 2,3-dioxygenase CU648_00090 PF04199 Putative cyclase CU648_00095 PF00266 Aminotransferase class-V CU648_00100 PF00440 Bacterial regulatory proteins, tetR family CU648_00100 PF08359 YsiA-like protein, C-terminal region CU648_00105 PF00293 NUDIX domain CU648_00105 PF13344 Haloacid dehalogenase-like hydrolase CU648_00135 PF02954 Bacterial regulatory protein, Fis family CU648_00135 PF00158 Sigma-54 interaction domain CU648_00135 PF01590 GAF domain CU648_00150 PF13302 Acetyltransferase (GNAT) domain CU648_00155 PF00455 DeoR C terminal sensor domain CU648_00155 PF08220 DeoR-like helix-turn-helix domain CU648_00175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_00175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CU648_00185 PF00872 Transposase, Mutator family CU648_00190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CU648_00190 PF02817 e3 binding domain CU648_00190 PF00364 Biotin-requiring enzyme CU648_00195 PF02779 Transketolase, pyrimidine binding domain CU648_00195 PF02780 Transketolase, C-terminal domain CU648_00200 PF00676 Dehydrogenase E1 component CU648_00210 PF00106 short chain dehydrogenase CU648_00215 PF04229 GrpB protein CU648_00215 PF13673 Acetyltransferase (GNAT) domain CU648_00255 PF00528 Binding-protein-dependent transport system inner membrane component CU648_00260 PF00005 ABC transporter CU648_00260 PF00571 CBS domain CU648_00265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CU648_00270 PF00574 Clp protease CU648_00285 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CU648_00290 PF13673 Acetyltransferase (GNAT) domain CU648_00295 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CU648_00295 PF18416 N-acetylglucosamine binding protein domain 2 CU648_00300 PF01202 Shikimate kinase CU648_00310 PF10990 Protein of unknown function (DUF2809) CU648_00320 PF04237 YjbR CU648_00330 PF00753 Metallo-beta-lactamase superfamily CU648_00330 PF13567 Domain of unknown function (DUF4131) CU648_00330 PF03772 Competence protein CU648_00380 PF13538 UvrD-like helicase C-terminal domain CU648_00400 PF00271 Helicase conserved C-terminal domain CU648_00400 PF00570 HRDC domain CU648_00400 PF16124 RecQ zinc-binding CU648_00400 PF09382 RQC domain CU648_00400 PF00270 DEAD/DEAH box helicase CU648_00450 PF02833 DHHA2 domain CU648_00450 PF01368 DHH family CU648_00455 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CU648_00455 PF18416 N-acetylglucosamine binding protein domain 2 CU648_00470 PF02627 Carboxymuconolactone decarboxylase family CU648_00475 PF01235 Sodium:alanine symporter family CU648_00480 PF00171 Aldehyde dehydrogenase family CU648_00485 PF00701 Dihydrodipicolinate synthetase family CU648_00490 PF05544 Proline racemase CU648_00495 PF05544 Proline racemase CU648_00500 PF01266 FAD dependent oxidoreductase CU648_00505 PF02954 Bacterial regulatory protein, Fis family CU648_00505 PF13188 PAS domain CU648_00505 PF00158 Sigma-54 interaction domain CU648_00510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_00510 PF04324 BFD-like [2Fe-2S] binding domain CU648_00520 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_00520 PF04324 BFD-like [2Fe-2S] binding domain CU648_00535 PF08876 Domain of unknown function (DUF1836) CU648_00540 PF09335 SNARE associated Golgi protein CU648_00555 PF04914 DltD protein CU648_00560 PF13302 Acetyltransferase (GNAT) domain CU648_00560 PF00958 GMP synthase C terminal domain CU648_00560 PF00117 Glutamine amidotransferase class-I CU648_00560 PF13673 Acetyltransferase (GNAT) domain CU648_00560 PF03352 Methyladenine glycosylase CU648_00565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_00570 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CU648_00570 PF00877 NlpC/P60 family CU648_00575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CU648_00575 PF13378 Enolase C-terminal domain-like CU648_00590 PF01965 DJ-1/PfpI family CU648_00595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CU648_00620 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CU648_00620 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CU648_00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_00625 PF00989 PAS fold CU648_00625 PF16736 Single Cache-like CU648_00625 PF00512 His Kinase A (phospho-acceptor) domain CU648_00630 PF00486 Transcriptional regulatory protein, C terminal CU648_00630 PF00072 Response regulator receiver domain CU648_00650 PF01048 Phosphorylase superfamily CU648_00655 PF03808 Glycosyl transferase WecB/TagA/CpsF family CU648_00660 PF01432 Peptidase family M3 CU648_00660 PF08439 Oligopeptidase F CU648_00665 PF13520 Amino acid permease CU648_00670 PF01037 Lrp/AsnC ligand binding domain CU648_00675 PF02645 Uncharacterised protein, DegV family COG1307 CU648_00680 PF07552 Spore Coat Protein X and V domain CU648_00715 PF07690 Major Facilitator Superfamily CU648_00725 PF04519 Polymer-forming cytoskeletal CU648_00730 PF13171 Protein of unknown function (DUF4004) CU648_00735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_00735 PF12793 Sugar transport-related sRNA regulator N-term CU648_00740 PF07690 Major Facilitator Superfamily CU648_00760 PF04226 Transglycosylase associated protein CU648_00765 PF01156 Inosine-uridine preferring nucleoside hydrolase CU648_00775 PF08241 Methyltransferase domain CU648_00815 PF00155 Aminotransferase class I and II CU648_00820 PF07977 FabA-like domain CU648_00825 PF03630 Fumble CU648_00850 PF00005 ABC transporter CU648_00910 PF01594 AI-2E family transporter CU648_00925 PF00296 Luciferase-like monooxygenase CU648_00930 PF00528 Binding-protein-dependent transport system inner membrane component CU648_00935 PF09084 NMT1/THI5 like CU648_00940 PF00005 ABC transporter CU648_00980 PF02522 Aminoglycoside 3-N-acetyltransferase CU648_01010 PF13536 Putative multidrug resistance efflux transporter CU648_01015 PF12867 DinB superfamily CU648_01035 PF08713 DNA alkylation repair enzyme CU648_01050 PF01522 Polysaccharide deacetylase CU648_01060 PF03741 Integral membrane protein TerC family CU648_01065 PF00884 Sulfatase CU648_01075 PF12848 ABC transporter CU648_01075 PF00005 ABC transporter CU648_01085 PF03176 MMPL family CU648_01090 PF16295 Tetracyclin repressor-like, C-terminal domain CU648_01090 PF00440 Bacterial regulatory proteins, tetR family CU648_01100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CU648_01105 PF01842 ACT domain CU648_01105 PF02153 Prephenate dehydrogenase CU648_01110 PF00155 Aminotransferase class I and II CU648_01115 PF01264 Chorismate synthase CU648_01125 PF00793 DAHP synthetase I family CU648_01125 PF01817 Chorismate mutase type II CU648_01150 PF01636 Phosphotransferase enzyme family CU648_01165 PF06725 3D domain CU648_01165 PF01476 LysM domain CU648_01180 PF04542 Sigma-70 region 2 CU648_01180 PF08281 Sigma-70, region 4 CU648_01200 PF06039 Malate:quinone oxidoreductase (Mqo) CU648_01205 PF13407 Periplasmic binding protein domain CU648_01210 PF02653 Branched-chain amino acid transport system / permease component CU648_01215 PF02653 Branched-chain amino acid transport system / permease component CU648_01220 PF00005 ABC transporter CU648_01225 PF00325 Bacterial regulatory proteins, crp family CU648_01225 PF04198 Putative sugar-binding domain CU648_01230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CU648_01230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CU648_01240 PF01791 DeoC/LacD family aldolase CU648_01265 PF03992 Antibiotic biosynthesis monooxygenase CU648_01285 PF01773 Na+ dependent nucleoside transporter N-terminus CU648_01285 PF07662 Na+ dependent nucleoside transporter C-terminus CU648_01290 PF00171 Aldehyde dehydrogenase family CU648_01295 PF00696 Amino acid kinase family CU648_01295 PF01472 PUA domain CU648_01305 PF14748 Pyrroline-5-carboxylate reductase dimerisation CU648_01305 PF03807 NADP oxidoreductase coenzyme F420-dependent CU648_01310 PF01546 Peptidase family M20/M25/M40 CU648_01315 PF09339 IclR helix-turn-helix domain CU648_01315 PF01614 Bacterial transcriptional regulator CU648_01325 PF00324 Amino acid permease CU648_01345 PF01139 tRNA-splicing ligase RtcB CU648_01350 PF00487 Fatty acid desaturase CU648_01355 PF00245 Alkaline phosphatase CU648_01360 PF11188 Protein of unknown function (DUF2975) CU648_01365 PF13443 Cro/C1-type HTH DNA-binding domain CU648_01380 PF10086 YhfC intramembrane metalloprotease CU648_01390 PF00072 Response regulator receiver domain CU648_01390 PF04397 LytTr DNA-binding domain CU648_01410 PF13302 Acetyltransferase (GNAT) domain CU648_01415 PF12681 Glyoxalase-like domain CU648_01440 PF17863 AAA lid domain CU648_01440 PF07726 ATPase family associated with various cellular activities (AAA) CU648_01455 PF07690 Major Facilitator Superfamily CU648_01465 PF00535 Glycosyl transferase family 2 CU648_01480 PF00535 Glycosyl transferase family 2 CU648_01485 PF00535 Glycosyl transferase family 2 CU648_01495 PF00202 Aminotransferase class-III CU648_01500 PF00199 Catalase CU648_01500 PF06628 Catalase-related immune-responsive CU648_01510 PF13382 Adenine deaminase C-terminal domain CU648_01510 PF01979 Amidohydrolase family CU648_01515 PF00144 Beta-lactamase CU648_01535 PF07726 ATPase family associated with various cellular activities (AAA) CU648_01535 PF17863 AAA lid domain CU648_01545 PF00881 Nitroreductase family CU648_01550 PF01047 MarR family CU648_01560 PF00679 Elongation factor G C-terminus CU648_01560 PF14492 Elongation Factor G, domain II CU648_01560 PF00009 Elongation factor Tu GTP binding domain CU648_01560 PF03764 Elongation factor G, domain IV CU648_01570 PF00293 NUDIX domain CU648_01585 PF00005 ABC transporter CU648_01590 PF00392 Bacterial regulatory proteins, gntR family CU648_01605 PF16363 GDP-mannose 4,6 dehydratase CU648_01610 PF00005 ABC transporter CU648_01635 PF12833 Helix-turn-helix domain CU648_01640 PF00583 Acetyltransferase (GNAT) family CU648_01655 PF00892 EamA-like transporter family CU648_01660 PF00155 Aminotransferase class I and II CU648_01660 PF00392 Bacterial regulatory proteins, gntR family CU648_01670 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CU648_01675 PF13031 Protein of unknown function (DUF3892) CU648_01710 PF01925 Sulfite exporter TauE/SafE CU648_01715 PF13302 Acetyltransferase (GNAT) domain CU648_01720 PF00324 Amino acid permease CU648_01730 PF08713 DNA alkylation repair enzyme CU648_01735 PF00376 MerR family regulatory protein CU648_01735 PF09278 MerR, DNA binding CU648_01745 PF00293 NUDIX domain CU648_01750 PF04989 Cephalosporin hydroxylase CU648_01755 PF10502 Signal peptidase, peptidase S26 CU648_01770 PF02146 Sir2 family CU648_01775 PF01470 Pyroglutamyl peptidase CU648_01790 PF03746 LamB/YcsF family CU648_01795 PF02626 Carboxyltransferase domain, subdomain A and B CU648_01800 PF02682 Carboxyltransferase domain, subdomain C and D CU648_01805 PF09339 IclR helix-turn-helix domain CU648_01805 PF01614 Bacterial transcriptional regulator CU648_01815 PF10502 Signal peptidase, peptidase S26 CU648_01820 PF03932 CutC family CU648_01830 PF07454 Stage II sporulation protein P (SpoIIP) CU648_01850 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CU648_01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CU648_01850 PF02770 Acyl-CoA dehydrogenase, middle domain CU648_01880 PF10903 Protein of unknown function (DUF2691) CU648_01890 PF00440 Bacterial regulatory proteins, tetR family CU648_01895 PF00391 PEP-utilising enzyme, mobile domain CU648_01895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CU648_01905 PF00753 Metallo-beta-lactamase superfamily CU648_01920 PF07875 Coat F domain CU648_01930 PF08892 YqcI/YcgG family CU648_01935 PF01810 LysE type translocator CU648_01940 PF00324 Amino acid permease CU648_01950 PF00269 Small, acid-soluble spore proteins, alpha/beta type CU648_01955 PF10710 Protein of unknown function (DUF2512) CU648_01965 PF11553 Protein of unknown function (DUF3231) CU648_01970 PF00269 Small, acid-soluble spore proteins, alpha/beta type CU648_01975 PF08240 Alcohol dehydrogenase GroES-like domain CU648_01975 PF00107 Zinc-binding dehydrogenase CU648_01975 PF13823 Alcohol dehydrogenase GroES-associated CU648_01990 PF12833 Helix-turn-helix domain CU648_01990 PF02311 AraC-like ligand binding domain CU648_02005 PF02899 Phage integrase, N-terminal SAM-like domain CU648_02005 PF00589 Phage integrase family CU648_02010 PF02899 Phage integrase, N-terminal SAM-like domain CU648_02010 PF00589 Phage integrase family CU648_02020 PF00857 Isochorismatase family CU648_02025 PF03358 NADPH-dependent FMN reductase CU648_02070 PF13361 UvrD-like helicase C-terminal domain CU648_02070 PF00580 UvrD/REP helicase N-terminal domain CU648_02075 PF02463 RecF/RecN/SMC N terminal domain CU648_02085 PF17936 Bacterial Ig domain CU648_02085 PF00149 Calcineurin-like phosphoesterase CU648_02085 PF02872 5'-nucleotidase, C-terminal domain CU648_02090 PF00199 Catalase CU648_02090 PF06628 Catalase-related immune-responsive CU648_02095 PF01544 CorA-like Mg2+ transporter protein CU648_02135 PF03073 TspO/MBR family CU648_02140 PF03441 FAD binding domain of DNA photolyase CU648_02140 PF00875 DNA photolyase CU648_02150 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CU648_02155 PF00361 Proton-conducting membrane transporter CU648_02155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CU648_02160 PF10057 Uncharacterized conserved protein (DUF2294) CU648_02175 PF07726 ATPase family associated with various cellular activities (AAA) CU648_02175 PF17863 AAA lid domain CU648_02185 PF01040 UbiA prenyltransferase family CU648_02190 PF00561 alpha/beta hydrolase fold CU648_02200 PF01297 Zinc-uptake complex component A periplasmic CU648_02205 PF00950 ABC 3 transport family CU648_02210 PF00005 ABC transporter CU648_02235 PF01451 Low molecular weight phosphotyrosine protein phosphatase CU648_02240 PF01758 Sodium Bile acid symporter family CU648_02245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_02250 PF01022 Bacterial regulatory protein, arsR family CU648_02265 PF00012 Hsp70 protein CU648_02270 PF07690 Major Facilitator Superfamily CU648_02280 PF01037 Lrp/AsnC ligand binding domain CU648_02295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_02305 PF00144 Beta-lactamase CU648_02325 PF12802 MarR family CU648_02330 PF00667 FAD binding domain CU648_02330 PF00067 Cytochrome P450 CU648_02330 PF00258 Flavodoxin CU648_02330 PF00175 Oxidoreductase NAD-binding domain CU648_02340 PF07690 Major Facilitator Superfamily CU648_02370 PF00072 Response regulator receiver domain CU648_02370 PF00486 Transcriptional regulatory protein, C terminal CU648_02375 PF00512 His Kinase A (phospho-acceptor) domain CU648_02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_02375 PF00672 HAMP domain CU648_02410 PF00291 Pyridoxal-phosphate dependent enzyme CU648_02420 PF00144 Beta-lactamase CU648_02435 PF00753 Metallo-beta-lactamase superfamily CU648_02440 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CU648_02450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CU648_02450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CU648_02465 PF02073 Thermophilic metalloprotease (M29) CU648_02480 PF13411 MerR HTH family regulatory protein CU648_02485 PF04072 Leucine carboxyl methyltransferase CU648_02500 PF00005 ABC transporter CU648_02505 PF02687 FtsX-like permease family CU648_02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_02520 PF00512 His Kinase A (phospho-acceptor) domain CU648_02520 PF00672 HAMP domain CU648_02525 PF00072 Response regulator receiver domain CU648_02525 PF00486 Transcriptional regulatory protein, C terminal CU648_02530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_02530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_02550 PF17676 LD-carboxypeptidase C-terminal domain CU648_02550 PF02016 LD-carboxypeptidase N-terminal domain CU648_02565 PF01842 ACT domain CU648_02565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CU648_02565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CU648_02570 PF00266 Aminotransferase class-V CU648_02585 PF04542 Sigma-70 region 2 CU648_02585 PF08281 Sigma-70, region 4 CU648_02600 PF07883 Cupin domain CU648_02610 PF01497 Periplasmic binding protein CU648_02610 PF12833 Helix-turn-helix domain CU648_02625 PF14436 Bacterial EndoU nuclease CU648_02625 PF04740 LXG domain of WXG superfamily CU648_02630 PF01804 Penicillin amidase CU648_02640 PF01476 LysM domain CU648_02640 PF01510 N-acetylmuramoyl-L-alanine amidase CU648_02640 PF01471 Putative peptidoglycan binding domain CU648_02650 PF00440 Bacterial regulatory proteins, tetR family CU648_02650 PF08361 MAATS-type transcriptional repressor, C-terminal region CU648_02655 PF07690 Major Facilitator Superfamily CU648_02690 PF14044 NETI protein CU648_02695 PF07690 Major Facilitator Superfamily CU648_02700 PF12697 Alpha/beta hydrolase family CU648_02705 PF01047 MarR family CU648_02710 PF07690 Major Facilitator Superfamily CU648_02725 PF12679 ABC-2 family transporter protein CU648_02730 PF00005 ABC transporter CU648_02730 PF13732 Domain of unknown function (DUF4162) CU648_02735 PF13396 Phospholipase_D-nuclease N-terminal CU648_02745 PF17314 Family of unknown function (DUF5360) CU648_02750 PF00893 Small Multidrug Resistance protein CU648_02755 PF00440 Bacterial regulatory proteins, tetR family CU648_02760 PF01289 Thiol-activated cytolysin CU648_02760 PF17440 Thiol-activated cytolysin beta sandwich domain CU648_02765 PF02667 Short chain fatty acid transporter CU648_02790 PF14256 YwiC-like protein CU648_02800 PF00005 ABC transporter CU648_02805 PF02361 Cobalt transport protein CU648_02820 PF03737 Aldolase/RraA CU648_02825 PF03606 C4-dicarboxylate anaerobic carrier CU648_02840 PF07690 Major Facilitator Superfamily CU648_02845 PF00440 Bacterial regulatory proteins, tetR family CU648_02850 PF07739 TipAS antibiotic-recognition domain CU648_02850 PF13411 MerR HTH family regulatory protein CU648_02875 PF04073 Aminoacyl-tRNA editing domain CU648_02880 PF13393 Histidyl-tRNA synthetase CU648_02880 PF03129 Anticodon binding domain CU648_02900 PF01638 HxlR-like helix-turn-helix CU648_02905 PF00881 Nitroreductase family CU648_02915 PF00391 PEP-utilising enzyme, mobile domain CU648_02915 PF00224 Pyruvate kinase, barrel domain CU648_02915 PF02887 Pyruvate kinase, alpha/beta domain CU648_02940 PF00005 ABC transporter CU648_02965 PF13419 Haloacid dehalogenase-like hydrolase CU648_02990 PF00293 NUDIX domain CU648_02990 PF13344 Haloacid dehalogenase-like hydrolase CU648_02995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_03000 PF00480 ROK family CU648_03005 PF07690 Major Facilitator Superfamily CU648_03010 PF14602 Hexapeptide repeat of succinyl-transferase CU648_03010 PF12464 Maltose acetyltransferase CU648_03015 PF00579 tRNA synthetases class I (W and Y) CU648_03020 PF13288 DXP reductoisomerase C-terminal domain CU648_03020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CU648_03020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CU648_03025 PF01594 AI-2E family transporter CU648_03045 PF08241 Methyltransferase domain CU648_03055 PF07690 Major Facilitator Superfamily CU648_03075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_03085 PF00571 CBS domain CU648_03085 PF03471 Transporter associated domain CU648_03085 PF01595 Cyclin M transmembrane N-terminal domain CU648_03090 PF13411 MerR HTH family regulatory protein CU648_03095 PF00892 EamA-like transporter family CU648_03100 PF00805 Pentapeptide repeats (8 copies) CU648_03105 PF06906 Protein of unknown function (DUF1272) CU648_03115 PF10282 Lactonase, 7-bladed beta-propeller CU648_03120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CU648_03120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CU648_03125 PF02447 GntP family permease CU648_03130 PF00923 Transaldolase/Fructose-6-phosphate aldolase CU648_03135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CU648_03135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CU648_03140 PF02779 Transketolase, pyrimidine binding domain CU648_03140 PF02780 Transketolase, C-terminal domain CU648_03140 PF00456 Transketolase, thiamine diphosphate binding domain CU648_03145 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CU648_03145 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CU648_03155 PF00296 Luciferase-like monooxygenase CU648_03165 PF00698 Acyl transferase domain CU648_03165 PF08240 Alcohol dehydrogenase GroES-like domain CU648_03165 PF00550 Phosphopantetheine attachment site CU648_03165 PF08659 KR domain CU648_03165 PF14765 Polyketide synthase dehydratase CU648_03165 PF02801 Beta-ketoacyl synthase, C-terminal domain CU648_03165 PF00107 Zinc-binding dehydrogenase CU648_03165 PF16197 Ketoacyl-synthetase C-terminal extension CU648_03165 PF00109 Beta-ketoacyl synthase, N-terminal domain CU648_03175 PF00106 short chain dehydrogenase CU648_03180 PF02868 Thermolysin metallopeptidase, alpha-helical domain CU648_03180 PF01447 Thermolysin metallopeptidase, catalytic domain CU648_03180 PF03413 Peptidase propeptide and YPEB domain CU648_03180 PF07504 Fungalysin/Thermolysin Propeptide Motif CU648_03190 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CU648_03195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CU648_03195 PF01872 RibD C-terminal domain CU648_03205 PF01638 HxlR-like helix-turn-helix CU648_03230 PF03928 Haem-degrading CU648_03270 PF03960 ArsC family CU648_03280 PF07702 UTRA domain CU648_03280 PF00392 Bacterial regulatory proteins, gntR family CU648_03285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CU648_03285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CU648_03295 PF01638 HxlR-like helix-turn-helix CU648_03300 PF01638 HxlR-like helix-turn-helix CU648_03305 PF00248 Aldo/keto reductase family CU648_03340 PF02567 Phenazine biosynthesis-like protein CU648_03355 PF13193 AMP-binding enzyme C-terminal domain CU648_03355 PF00501 AMP-binding enzyme CU648_03360 PF02525 Flavodoxin-like fold CU648_03365 PF01638 HxlR-like helix-turn-helix CU648_03370 PF01022 Bacterial regulatory protein, arsR family CU648_03375 PF01522 Polysaccharide deacetylase CU648_03375 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CU648_03380 PF12791 Anti-sigma factor N-terminus CU648_03385 PF04542 Sigma-70 region 2 CU648_03405 PF00440 Bacterial regulatory proteins, tetR family CU648_03435 PF05656 Protein of unknown function (DUF805) CU648_03440 PF01061 ABC-2 type transporter CU648_03445 PF13732 Domain of unknown function (DUF4162) CU648_03445 PF00005 ABC transporter CU648_03465 PF03063 Prismane/CO dehydrogenase family CU648_03480 PF00753 Metallo-beta-lactamase superfamily CU648_03485 PF01183 Glycosyl hydrolases family 25 CU648_03485 PF01471 Putative peptidoglycan binding domain CU648_03550 PF00753 Metallo-beta-lactamase superfamily CU648_03555 PF08240 Alcohol dehydrogenase GroES-like domain CU648_03555 PF00107 Zinc-binding dehydrogenase CU648_03560 PF00324 Amino acid permease CU648_03580 PF07690 Major Facilitator Superfamily CU648_03610 PF02585 GlcNAc-PI de-N-acetylase CU648_03615 PF08830 Protein of unknown function (DUF1806) CU648_03620 PF03600 Citrate transporter CU648_03635 PF01497 Periplasmic binding protein CU648_03640 PF01032 FecCD transport family CU648_03645 PF01032 FecCD transport family CU648_03650 PF05675 Protein of unknown function (DUF817) CU648_03655 PF02567 Phenazine biosynthesis-like protein CU648_03660 PF13170 Protein of unknown function (DUF4003) CU648_03675 PF03466 LysR substrate binding domain CU648_03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_03680 PF08240 Alcohol dehydrogenase GroES-like domain CU648_03680 PF00107 Zinc-binding dehydrogenase CU648_03695 PF01713 Smr domain CU648_03695 PF00488 MutS domain V CU648_03705 PF09154 Domain of unknown function (DUF1939) CU648_03705 PF00128 Alpha amylase, catalytic domain CU648_03710 PF00797 N-acetyltransferase CU648_03715 PF01432 Peptidase family M3 CU648_03715 PF08439 Oligopeptidase F CU648_03720 PF00144 Beta-lactamase CU648_03730 PF07690 Major Facilitator Superfamily CU648_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_03735 PF03466 LysR substrate binding domain CU648_03750 PF03009 Glycerophosphoryl diester phosphodiesterase family CU648_03770 PF01494 FAD binding domain CU648_03775 PF01022 Bacterial regulatory protein, arsR family CU648_03780 PF08240 Alcohol dehydrogenase GroES-like domain CU648_03780 PF00107 Zinc-binding dehydrogenase CU648_03785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CU648_03800 PF18801 response regulator aspartate phosphatase H, N terminal CU648_03810 PF01758 Sodium Bile acid symporter family CU648_03815 PF01565 FAD binding domain CU648_03815 PF02913 FAD linked oxidases, C-terminal domain CU648_03845 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_03850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CU648_03855 PF00535 Glycosyl transferase family 2 CU648_03860 PF00378 Enoyl-CoA hydratase/isomerase CU648_03865 PF18496 Collagenase G catalytic helper subdomain CU648_03865 PF01752 Collagenase CU648_03865 PF08453 Peptidase family M9 N-terminal CU648_03870 PF02308 MgtC family CU648_03885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_03890 PF04294 VanW like protein CU648_03900 PF13037 Domain of unknown function (DUF3898) CU648_03900 PF13039 Protein of unknown function (DUF3900) CU648_03920 PF00313 'Cold-shock' DNA-binding domain CU648_03930 PF00258 Flavodoxin CU648_03940 PF00293 NUDIX domain CU648_03950 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_03960 PF00106 short chain dehydrogenase CU648_03970 PF00206 Lyase CU648_03970 PF14698 Argininosuccinate lyase C-terminal CU648_03980 PF01156 Inosine-uridine preferring nucleoside hydrolase CU648_03985 PF00474 Sodium:solute symporter family CU648_03995 PF00171 Aldehyde dehydrogenase family CU648_04015 PF13243 Squalene-hopene cyclase C-terminal domain CU648_04015 PF13249 Squalene-hopene cyclase N-terminal domain CU648_04020 PF02681 Divergent PAP2 family CU648_04025 PF00892 EamA-like transporter family CU648_04030 PF06961 Protein of unknown function (DUF1294) CU648_04045 PF10609 NUBPL iron-transfer P-loop NTPase CU648_04055 PF02391 MoaE protein CU648_04060 PF03453 MoeA N-terminal region (domain I and II) CU648_04060 PF03454 MoeA C-terminal region (domain IV) CU648_04060 PF00994 Probable molybdopterin binding domain CU648_04065 PF00899 ThiF family CU648_04070 PF01226 Formate/nitrite transporter CU648_04080 PF04055 Radical SAM superfamily CU648_04080 PF06463 Molybdenum Cofactor Synthesis C CU648_04085 PF02634 FdhD/NarQ family CU648_04090 PF10057 Uncharacterized conserved protein (DUF2294) CU648_04095 PF07849 Protein of unknown function (DUF1641) CU648_04100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CU648_04100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CU648_04100 PF01568 Molydopterin dinucleotide binding domain CU648_04100 PF00037 4Fe-4S binding domain CU648_04100 PF00384 Molybdopterin oxidoreductase CU648_04115 PF03323 Bacillus/Clostridium GerA spore germination protein CU648_04155 PF08241 Methyltransferase domain CU648_04160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_04165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_04170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_04175 PF00375 Sodium:dicarboxylate symporter family CU648_04180 PF03816 Cell envelope-related transcriptional attenuator domain CU648_04190 PF04542 Sigma-70 region 2 CU648_04190 PF08281 Sigma-70, region 4 CU648_04205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_04215 PF00005 ABC transporter CU648_04215 PF13732 Domain of unknown function (DUF4162) CU648_04230 PF02899 Phage integrase, N-terminal SAM-like domain CU648_04230 PF00589 Phage integrase family CU648_04235 PF00589 Phage integrase family CU648_04235 PF02899 Phage integrase, N-terminal SAM-like domain CU648_04240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CU648_04240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CU648_04245 PF03989 DNA gyrase C-terminal domain, beta-propeller CU648_04245 PF00521 DNA gyrase/topoisomerase IV, subunit A CU648_04250 PF01751 Toprim domain CU648_04250 PF00204 DNA gyrase B CU648_04250 PF00986 DNA gyrase B subunit, carboxyl terminus CU648_04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_04260 PF13380 CoA binding domain CU648_04265 PF13180 PDZ domain CU648_04270 PF00486 Transcriptional regulatory protein, C terminal CU648_04270 PF00072 Response regulator receiver domain CU648_04275 PF04055 Radical SAM superfamily CU648_04280 PF13597 Anaerobic ribonucleoside-triphosphate reductase CU648_04280 PF03477 ATP cone domain CU648_04285 PF02660 Glycerol-3-phosphate acyltransferase CU648_04290 PF01521 Iron-sulphur cluster biosynthesis CU648_04295 PF03061 Thioesterase superfamily CU648_04300 PF01476 LysM domain CU648_04300 PF00704 Glycosyl hydrolases family 18 CU648_04310 PF08177 Small acid-soluble spore protein N family CU648_04315 PF13040 Fur-regulated basic protein B CU648_04320 PF01336 OB-fold nucleic acid binding domain CU648_04320 PF00929 Exonuclease CU648_04320 PF02811 PHP domain CU648_04320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CU648_04320 PF14579 Helix-hairpin-helix motif CU648_04320 PF11490 DNA polymerase III polC-type N-terminus II CU648_04320 PF07733 Bacterial DNA polymerase III alpha NTPase domain CU648_04330 PF00578 AhpC/TSA family CU648_04345 PF00005 ABC transporter CU648_04345 PF00664 ABC transporter transmembrane region CU648_04350 PF00694 Aconitase C-terminal domain CU648_04350 PF00330 Aconitase family (aconitate hydratase) CU648_04360 PF01522 Polysaccharide deacetylase CU648_04370 PF08179 Small acid-soluble spore protein P family CU648_04390 PF02272 DHHA1 domain CU648_04390 PF01411 tRNA synthetases class II (A) CU648_04390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CU648_04395 PF00293 NUDIX domain CU648_04395 PF13344 Haloacid dehalogenase-like hydrolase CU648_04405 PF02803 Thiolase, C-terminal domain CU648_04405 PF00108 Thiolase, N-terminal domain CU648_04410 PF13193 AMP-binding enzyme C-terminal domain CU648_04410 PF00501 AMP-binding enzyme CU648_04415 PF02632 BioY family CU648_04420 PF13193 AMP-binding enzyme C-terminal domain CU648_04420 PF00501 AMP-binding enzyme CU648_04445 PF05532 CsbD-like CU648_04475 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_04475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_04485 PF13188 PAS domain CU648_04485 PF13426 PAS domain CU648_04485 PF00512 His Kinase A (phospho-acceptor) domain CU648_04485 PF00989 PAS fold CU648_04490 PF01738 Dienelactone hydrolase family CU648_04495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_04500 PF00474 Sodium:solute symporter family CU648_04505 PF01645 Conserved region in glutamate synthase CU648_04510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CU648_04515 PF02559 CarD-like/TRCF domain CU648_04520 PF00491 Arginase family CU648_04525 PF01979 Amidohydrolase family CU648_04530 PF17392 Urocanase C-terminal domain CU648_04530 PF01175 Urocanase Rossmann-like domain CU648_04530 PF17391 Urocanase N-terminal domain CU648_04535 PF00221 Aromatic amino acid lyase CU648_04540 PF09021 HutP CU648_04545 PF01209 ubiE/COQ5 methyltransferase family CU648_04570 PF11084 Protein of unknown function (DUF2621) CU648_04590 PF07301 Protein of unknown function (DUF1453) CU648_04595 PF02683 Cytochrome C biogenesis protein transmembrane region CU648_04620 PF00005 ABC transporter CU648_04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_04630 PF03466 LysR substrate binding domain CU648_04635 PF03788 LrgA family CU648_04640 PF04172 LrgB-like family CU648_04645 PF00293 NUDIX domain CU648_04645 PF13344 Haloacid dehalogenase-like hydrolase CU648_04655 PF01925 Sulfite exporter TauE/SafE CU648_04660 PF01609 Transposase DDE domain CU648_04670 PF01510 N-acetylmuramoyl-L-alanine amidase CU648_04670 PF01471 Putative peptidoglycan binding domain CU648_04685 PF00005 ABC transporter CU648_04685 PF00664 ABC transporter transmembrane region CU648_04690 PF00664 ABC transporter transmembrane region CU648_04690 PF00005 ABC transporter CU648_04695 PF03672 Uncharacterised protein family (UPF0154) CU648_04700 PF10747 Sporulation inhibitor of replication protein SirA CU648_04705 PF02780 Transketolase, C-terminal domain CU648_04705 PF02779 Transketolase, pyrimidine binding domain CU648_04705 PF00456 Transketolase, thiamine diphosphate binding domain CU648_04710 PF00528 Binding-protein-dependent transport system inner membrane component CU648_04715 PF00528 Binding-protein-dependent transport system inner membrane component CU648_04720 PF00005 ABC transporter CU648_04730 PF00149 Calcineurin-like phosphoesterase CU648_04730 PF02872 5'-nucleotidase, C-terminal domain CU648_04735 PF05979 Bacterial protein of unknown function (DUF896) CU648_04740 PF00239 Resolvase, N terminal domain CU648_04745 PF01726 LexA DNA binding domain CU648_04745 PF00717 Peptidase S24-like CU648_04760 PF03551 Transcriptional regulator PadR-like family CU648_04775 PF14431 YwqJ-like deaminase CU648_04775 PF14449 Pre-toxin TG CU648_04775 PF04740 LXG domain of WXG superfamily CU648_04790 PF03951 Glutamine synthetase, beta-Grasp domain CU648_04790 PF00120 Glutamine synthetase, catalytic domain CU648_04795 PF13411 MerR HTH family regulatory protein CU648_04800 PF06838 Methionine gamma-lyase CU648_04805 PF16360 GTP-binding GTPase Middle Region CU648_04805 PF01926 50S ribosome-binding GTPase CU648_04805 PF13167 GTP-binding GTPase N-terminal CU648_04810 PF03458 UPF0126 domain CU648_04815 PF00004 ATPase family associated with various cellular activities (AAA) CU648_04815 PF17866 AAA lid domain CU648_04830 PF17209 Hfq protein CU648_04845 PF01476 LysM domain CU648_04845 PF06725 3D domain CU648_04855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CU648_04855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CU648_04860 PF00294 pfkB family carbohydrate kinase CU648_04865 PF08220 DeoR-like helix-turn-helix domain CU648_04865 PF00455 DeoR C terminal sensor domain CU648_04870 PF00465 Iron-containing alcohol dehydrogenase CU648_04875 PF04238 Protein of unknown function (DUF420) CU648_04890 PF00324 Amino acid permease CU648_04900 PF00704 Glycosyl hydrolases family 18 CU648_04900 PF00041 Fibronectin type III domain CU648_04910 PF10518 TAT (twin-arginine translocation) pathway signal sequence CU648_04910 PF00149 Calcineurin-like phosphoesterase CU648_04915 PF01226 Formate/nitrite transporter CU648_04920 PF00216 Bacterial DNA-binding protein CU648_04930 PF00403 Heavy-metal-associated domain CU648_04935 PF00403 Heavy-metal-associated domain CU648_04940 PF02583 Metal-sensitive transcriptional repressor CU648_04950 PF00756 Putative esterase CU648_04955 PF00005 ABC transporter CU648_04960 PF01032 FecCD transport family CU648_04965 PF01032 FecCD transport family CU648_04970 PF01497 Periplasmic binding protein CU648_04975 PF03372 Endonuclease/Exonuclease/phosphatase family CU648_04980 PF12833 Helix-turn-helix domain CU648_04980 PF02805 Metal binding domain of Ada CU648_04985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CU648_04985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CU648_04990 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CU648_04990 PF00730 HhH-GPD superfamily base excision DNA repair protein CU648_04995 PF07687 Peptidase dimerisation domain CU648_04995 PF01546 Peptidase family M20/M25/M40 CU648_05015 PF00561 alpha/beta hydrolase fold CU648_05020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_05025 PF00563 EAL domain CU648_05025 PF00990 Diguanylate cyclase, GGDEF domain CU648_05025 PF03707 Bacterial signalling protein N terminal repeat CU648_05040 PF10787 Uncharacterised protein from bacillus cereus group CU648_05045 PF04172 LrgB-like family CU648_05050 PF03788 LrgA family CU648_05055 PF00155 Aminotransferase class I and II CU648_05055 PF00392 Bacterial regulatory proteins, gntR family CU648_05060 PF00561 alpha/beta hydrolase fold CU648_05060 PF00364 Biotin-requiring enzyme CU648_05065 PF02585 GlcNAc-PI de-N-acetylase CU648_05080 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CU648_05085 PF00082 Subtilase family CU648_05090 PF07486 Cell Wall Hydrolase CU648_05105 PF00884 Sulfatase CU648_05110 PF00350 Dynamin family CU648_05120 PF00512 His Kinase A (phospho-acceptor) domain CU648_05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_05125 PF00072 Response regulator receiver domain CU648_05125 PF00486 Transcriptional regulatory protein, C terminal CU648_05140 PF00005 ABC transporter CU648_05145 PF08676 MutL C terminal dimerisation domain CU648_05145 PF01119 DNA mismatch repair protein, C-terminal domain CU648_05150 PF05192 MutS domain III CU648_05150 PF05188 MutS domain II CU648_05150 PF05190 MutS family domain IV CU648_05150 PF00488 MutS domain V CU648_05150 PF01624 MutS domain I CU648_05155 PF10628 Outer spore coat protein E (CotE) CU648_05160 PF06133 Control of competence regulator ComK, YlbF/YmcA CU648_05165 PF01938 TRAM domain CU648_05165 PF04055 Radical SAM superfamily CU648_05165 PF00919 Uncharacterized protein family UPF0004 CU648_05170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CU648_05175 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CU648_05175 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CU648_05175 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CU648_05180 PF01244 Membrane dipeptidase (Peptidase family M19) CU648_05185 PF04232 Stage V sporulation protein S (SpoVS) CU648_05190 PF13277 YmdB-like protein CU648_05195 PF00013 KH domain CU648_05195 PF12072 Domain of unknown function (DUF3552) CU648_05195 PF01966 HD domain CU648_05200 PF00154 recA bacterial DNA recombination protein CU648_05210 PF00994 Probable molybdopterin binding domain CU648_05210 PF02464 Competence-damaged protein CU648_05210 PF18146 Damage-inducible protein CinA KH domain CU648_05215 PF01066 CDP-alcohol phosphatidyltransferase CU648_05220 PF13464 Domain of unknown function (DUF4115) CU648_05225 PF11868 Protein of unknown function (DUF3388) CU648_05230 PF11588 Protein of unknown function (DUF3243) CU648_05240 PF05193 Peptidase M16 inactive domain CU648_05240 PF00675 Insulinase (Peptidase family M16) CU648_05245 PF05193 Peptidase M16 inactive domain CU648_05270 PF07702 UTRA domain CU648_05270 PF00392 Bacterial regulatory proteins, gntR family CU648_05275 PF09397 Ftsk gamma domain CU648_05275 PF01580 FtsK/SpoIIIE family CU648_05275 PF17854 FtsK alpha domain CU648_05280 PF14035 YlzJ-like protein CU648_05285 PF00574 Clp protease CU648_05290 PF17770 Ribonuclease J C-terminal domain CU648_05290 PF00753 Metallo-beta-lactamase superfamily CU648_05290 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CU648_05300 PF00701 Dihydrodipicolinate synthetase family CU648_05305 PF13840 ACT domain CU648_05305 PF00696 Amino acid kinase family CU648_05310 PF02774 Semialdehyde dehydrogenase, dimerisation domain CU648_05310 PF01118 Semialdehyde dehydrogenase, NAD binding domain CU648_05315 PF02441 Flavoprotein CU648_05320 PF16924 Dipicolinate synthase subunit A N-terminal domain CU648_05320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CU648_05330 PF05239 PRC-barrel domain CU648_05335 PF05193 Peptidase M16 inactive domain CU648_05335 PF00675 Insulinase (Peptidase family M16) CU648_05340 PF01522 Polysaccharide deacetylase CU648_05345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CU648_05345 PF01138 3' exoribonuclease family, domain 1 CU648_05345 PF00013 KH domain CU648_05345 PF03725 3' exoribonuclease family, domain 2 CU648_05345 PF00575 S1 RNA binding domain CU648_05350 PF00312 Ribosomal protein S15 CU648_05355 PF01687 Riboflavin kinase CU648_05355 PF06574 FAD synthetase CU648_05360 PF01509 TruB family pseudouridylate synthase (N terminal domain) CU648_05360 PF16198 tRNA pseudouridylate synthase B C-terminal domain CU648_05365 PF02033 Ribosome-binding factor A CU648_05370 PF04456 Protein of unknown function (DUF503) CU648_05375 PF00009 Elongation factor Tu GTP binding domain CU648_05375 PF11987 Translation-initiation factor 2 CU648_05375 PF04760 Translation initiation factor IF-2, N-terminal region CU648_05380 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CU648_05385 PF04296 Protein of unknown function (DUF448) CU648_05390 PF00575 S1 RNA binding domain CU648_05390 PF13184 NusA-like KH domain CU648_05390 PF08529 NusA N-terminal domain CU648_05395 PF02576 RimP N-terminal domain CU648_05395 PF17384 RimP C-terminal SH3 domain CU648_05400 PF07733 Bacterial DNA polymerase III alpha NTPase domain CU648_05400 PF11490 DNA polymerase III polC-type N-terminus II CU648_05400 PF14480 DNA polymerase III polC-type N-terminus I CU648_05400 PF02811 PHP domain CU648_05400 PF00929 Exonuclease CU648_05400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CU648_05400 PF14579 Helix-hairpin-helix motif CU648_05410 PF04073 Aminoacyl-tRNA editing domain CU648_05410 PF03129 Anticodon binding domain CU648_05410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CU648_05415 PF17820 PDZ domain CU648_05415 PF02163 Peptidase family M50 CU648_05420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CU648_05420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CU648_05420 PF13288 DXP reductoisomerase C-terminal domain CU648_05430 PF01255 Putative undecaprenyl diphosphate synthase CU648_05435 PF01765 Ribosome recycling factor CU648_05440 PF00696 Amino acid kinase family CU648_05445 PF00889 Elongation factor TS CU648_05450 PF00318 Ribosomal protein S2 CU648_05455 PF06018 CodY GAF-like domain CU648_05455 PF08222 CodY helix-turn-helix domain CU648_05460 PF00004 ATPase family associated with various cellular activities (AAA) CU648_05460 PF07724 AAA domain (Cdc48 subfamily) CU648_05460 PF10431 C-terminal, D2-small domain, of ClpB protein CU648_05465 PF00227 Proteasome subunit CU648_05470 PF02899 Phage integrase, N-terminal SAM-like domain CU648_05470 PF00589 Phage integrase family CU648_05475 PF01134 Glucose inhibited division protein A CU648_05480 PF01751 Toprim domain CU648_05480 PF01396 Topoisomerase DNA binding C4 zinc finger CU648_05480 PF01131 DNA topoisomerase CU648_05485 PF02481 DNA recombination-mediator protein A CU648_05490 PF02629 CoA binding domain CU648_05490 PF00549 CoA-ligase CU648_05495 PF08442 ATP-grasp domain CU648_05495 PF00549 CoA-ligase CU648_05500 PF01351 Ribonuclease HII CU648_05505 PF01926 50S ribosome-binding GTPase CU648_05510 PF10502 Signal peptidase, peptidase S26 CU648_05515 PF01245 Ribosomal protein L19 CU648_05520 PF01746 tRNA (Guanine-1)-methyltransferase CU648_05525 PF01782 RimM N-terminal domain CU648_05525 PF05239 PRC-barrel domain CU648_05535 PF00886 Ribosomal protein S16 CU648_05540 PF02881 SRP54-type protein, helical bundle domain CU648_05540 PF00448 SRP54-type protein, GTPase domain CU648_05540 PF02978 Signal peptide binding domain CU648_05545 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CU648_05550 PF00448 SRP54-type protein, GTPase domain CU648_05550 PF02881 SRP54-type protein, helical bundle domain CU648_05555 PF02463 RecF/RecN/SMC N terminal domain CU648_05555 PF06470 SMC proteins Flexible Hinge Domain CU648_05560 PF14622 Ribonuclease-III-like CU648_05560 PF00035 Double-stranded RNA binding motif CU648_05565 PF00550 Phosphopantetheine attachment site CU648_05575 PF00698 Acyl transferase domain CU648_05580 PF02504 Fatty acid synthesis protein CU648_05585 PF03061 Thioesterase superfamily CU648_05590 PF00270 DEAD/DEAH box helicase CU648_05590 PF17191 RecG wedge domain CU648_05590 PF00271 Helicase conserved C-terminal domain CU648_05595 PF02734 DAK2 domain CU648_05595 PF13684 Dihydroxyacetone kinase family CU648_05600 PF03780 Asp23 family, cell envelope-related function CU648_05605 PF00830 Ribosomal L28 family CU648_05610 PF08183 Stage V sporulation protein family CU648_05615 PF04263 Thiamin pyrophosphokinase, catalytic domain CU648_05615 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CU648_05620 PF00834 Ribulose-phosphate 3 epimerase family CU648_05625 PF16745 RsgA N-terminal domain CU648_05625 PF03193 RsgA GTPase CU648_05630 PF00069 Protein kinase domain CU648_05630 PF03793 PASTA domain CU648_05640 PF04055 Radical SAM superfamily CU648_05645 PF01189 16S rRNA methyltransferase RsmB/F CU648_05645 PF01029 NusB family CU648_05650 PF00551 Formyl transferase CU648_05650 PF02911 Formyl transferase, C-terminal domain CU648_05655 PF01327 Polypeptide deformylase CU648_05660 PF00271 Helicase conserved C-terminal domain CU648_05660 PF17764 3′ DNA-binding domain (3′BD) CU648_05660 PF18074 Primosomal protein N C-terminal domain CU648_05660 PF04851 Type III restriction enzyme, res subunit CU648_05660 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CU648_05665 PF04127 DNA / pantothenate metabolism flavoprotein CU648_05665 PF02441 Flavoprotein CU648_05670 PF01192 RNA polymerase Rpb6 CU648_05675 PF00625 Guanylate kinase CU648_05680 PF04025 Domain of unknown function (DUF370) CU648_05685 PF08340 Domain of unknown function (DUF1732) CU648_05685 PF03755 YicC-like family, N-terminal region CU648_05690 PF00689 Cation transporting ATPase, C-terminus CU648_05690 PF00690 Cation transporter/ATPase, N-terminus CU648_05700 PF01321 Creatinase/Prolidase N-terminal domain CU648_05700 PF00557 Metallopeptidase family M24 CU648_05735 PF00156 Phosphoribosyl transferase domain CU648_05740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CU648_05745 PF01180 Dihydroorotate dehydrogenase CU648_05750 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CU648_05750 PF00175 Oxidoreductase NAD-binding domain CU648_05755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CU648_05755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CU648_05755 PF02142 MGS-like domain CU648_05760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CU648_05760 PF00117 Glutamine amidotransferase class-I CU648_05765 PF01979 Amidohydrolase family CU648_05770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CU648_05770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CU648_05775 PF00860 Permease family CU648_05780 PF00156 Phosphoribosyl transferase domain CU648_05785 PF00849 RNA pseudouridylate synthase CU648_05785 PF01479 S4 domain CU648_05790 PF01252 Signal peptidase (SPase) II CU648_05800 PF06827 Zinc finger found in FPG and IleRS CU648_05800 PF00133 tRNA synthetases class I (I, L, M and V) CU648_05800 PF08264 Anticodon-binding domain of tRNA CU648_05805 PF05103 DivIVA protein CU648_05810 PF01479 S4 domain CU648_05810 PF17774 Putative RNA-binding domain in YlmH CU648_05815 PF02325 YGGT family CU648_05820 PF04472 Cell division protein SepF CU648_05825 PF01168 Alanine racemase, N-terminal domain CU648_05835 PF05239 PRC-barrel domain CU648_05840 PF04539 Sigma-70 region 3 CU648_05840 PF04542 Sigma-70 region 2 CU648_05840 PF04545 Sigma-70, region 4 CU648_05845 PF04545 Sigma-70, region 4 CU648_05845 PF04542 Sigma-70 region 2 CU648_05850 PF03419 Sporulation factor SpoIIGA CU648_05855 PF12327 FtsZ family, C-terminal domain CU648_05855 PF00091 Tubulin/FtsZ family, GTPase domain CU648_05860 PF02491 SHS2 domain inserted in FTSA CU648_05865 PF08478 POTRA domain, FtsQ-type CU648_05865 PF03799 Cell division protein FtsQ CU648_05870 PF01565 FAD binding domain CU648_05870 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CU648_05875 PF04101 Glycosyltransferase family 28 C-terminal domain CU648_05875 PF03033 Glycosyltransferase family 28 N-terminal domain CU648_05880 PF01098 Cell cycle protein CU648_05885 PF08245 Mur ligase middle domain CU648_05885 PF02875 Mur ligase family, glutamate ligase domain CU648_05890 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CU648_05890 PF00953 Glycosyl transferase family 4 CU648_05895 PF08245 Mur ligase middle domain CU648_05895 PF02875 Mur ligase family, glutamate ligase domain CU648_05895 PF01225 Mur ligase family, catalytic domain CU648_05900 PF00905 Penicillin binding protein transpeptidase domain CU648_05900 PF03717 Penicillin-binding Protein dimerisation domain CU648_05900 PF03793 PASTA domain CU648_05910 PF04977 Septum formation initiator CU648_05915 PF01795 MraW methylase family CU648_05920 PF10079 Bacillithiol biosynthesis BshC CU648_05925 PF02558 Ketopantoate reductase PanE/ApbA CU648_05925 PF08546 Ketopantoate reductase PanE/ApbA C terminal CU648_05930 PF00583 Acetyltransferase (GNAT) family CU648_05940 PF01783 Ribosomal L32p protein family CU648_05945 PF02620 Large ribosomal RNA subunit accumulation protein YceD CU648_05950 PF05636 HIGH Nucleotidyl Transferase CU648_05955 PF13180 PDZ domain CU648_05955 PF05362 Lon protease (S16) C-terminal proteolytic domain CU648_05960 PF01734 Patatin-like phospholipase CU648_05965 PF07670 Nucleoside recognition CU648_05970 PF01467 Cytidylyltransferase-like CU648_05985 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CU648_05990 PF06133 Control of competence regulator ComK, YlbF/YmcA CU648_05995 PF00300 Histidine phosphatase superfamily (branch 1) CU648_06000 PF14003 YlbE-like protein CU648_06005 PF14071 Putative coat protein CU648_06010 PF00188 Cysteine-rich secretory protein family CU648_06010 PF14504 CAP-associated N-terminal CU648_06015 PF08868 YugN-like family CU648_06025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CU648_06035 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CU648_06040 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CU648_06045 PF00510 Cytochrome c oxidase subunit III CU648_06050 PF00115 Cytochrome C and Quinol oxidase polypeptide I CU648_06055 PF00034 Cytochrome c CU648_06055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CU648_06055 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CU648_06060 PF01040 UbiA prenyltransferase family CU648_06065 PF02628 Cytochrome oxidase assembly protein CU648_06070 PF02436 Conserved carboxylase domain CU648_06070 PF00682 HMGL-like CU648_06070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CU648_06070 PF00364 Biotin-requiring enzyme CU648_06070 PF00289 Biotin carboxylase, N-terminal domain CU648_06070 PF02785 Biotin carboxylase C-terminal domain CU648_06080 PF01098 Cell cycle protein CU648_06085 PF07408 Protein of unknown function (DUF1507) CU648_06095 PF13638 PIN domain CU648_06095 PF02562 PhoH-like protein CU648_06105 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CU648_06115 PF14036 YlaH-like protein CU648_06130 PF00459 Inositol monophosphatase family CU648_06140 PF06335 Protein of unknown function (DUF1054) CU648_06145 PF05256 Uncharacterised protein family (UPF0223) CU648_06150 PF01276 Orn/Lys/Arg decarboxylase, major domain CU648_06150 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CU648_06190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CU648_06190 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_06195 PF02817 e3 binding domain CU648_06195 PF00364 Biotin-requiring enzyme CU648_06195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CU648_06200 PF02780 Transketolase, C-terminal domain CU648_06200 PF02779 Transketolase, pyrimidine binding domain CU648_06205 PF00676 Dehydrogenase E1 component CU648_06215 PF01327 Polypeptide deformylase CU648_06235 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CU648_06235 PF00753 Metallo-beta-lactamase superfamily CU648_06235 PF17770 Ribonuclease J C-terminal domain CU648_06240 PF02254 TrkA-N domain CU648_06240 PF02080 TrkA-C domain CU648_06250 PF01546 Peptidase family M20/M25/M40 CU648_06250 PF07687 Peptidase dimerisation domain CU648_06255 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_06255 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CU648_06255 PF14602 Hexapeptide repeat of succinyl-transferase CU648_06260 PF03466 LysR substrate binding domain CU648_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_06275 PF04308 Ribonuclease H-like CU648_06290 PF08796 Protein of unknown function (DUF1797) CU648_06305 PF00563 EAL domain CU648_06305 PF10388 EAL-domain associated signalling protein domain CU648_06315 PF00149 Calcineurin-like phosphoesterase CU648_06315 PF10518 TAT (twin-arginine translocation) pathway signal sequence CU648_06330 PF13089 Polyphosphate kinase N-terminal domain CU648_06330 PF17941 Polyphosphate kinase C-terminal domain 1 CU648_06330 PF02503 Polyphosphate kinase middle domain CU648_06330 PF13090 Polyphosphate kinase C-terminal domain 2 CU648_06335 PF02541 Ppx/GppA phosphatase family CU648_06340 PF14177 YkyB-like protein CU648_06370 PF07690 Major Facilitator Superfamily CU648_06385 PF08267 Cobalamin-independent synthase, N-terminal domain CU648_06385 PF01717 Cobalamin-independent synthase, Catalytic domain CU648_06395 PF14040 Deoxyribonuclease NucA/NucB CU648_06410 PF00512 His Kinase A (phospho-acceptor) domain CU648_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_06420 PF00155 Aminotransferase class I and II CU648_06425 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CU648_06425 PF00356 Bacterial regulatory proteins, lacI family CU648_06430 PF00528 Binding-protein-dependent transport system inner membrane component CU648_06435 PF00528 Binding-protein-dependent transport system inner membrane component CU648_06440 PF13416 Bacterial extracellular solute-binding protein CU648_06445 PF16657 Maltogenic Amylase, C-terminal domain CU648_06445 PF00128 Alpha amylase, catalytic domain CU648_06445 PF02903 Alpha amylase, N-terminal ig-like domain CU648_06450 PF16657 Maltogenic Amylase, C-terminal domain CU648_06450 PF00128 Alpha amylase, catalytic domain CU648_06455 PF00005 ABC transporter CU648_06455 PF03459 TOBE domain CU648_06455 PF17912 MalK OB fold domain CU648_06495 PF02803 Thiolase, C-terminal domain CU648_06495 PF00108 Thiolase, N-terminal domain CU648_06500 PF00293 NUDIX domain CU648_06535 PF03551 Transcriptional regulator PadR-like family CU648_06555 PF01636 Phosphotransferase enzyme family CU648_06560 PF00795 Carbon-nitrogen hydrolase CU648_06565 PF00155 Aminotransferase class I and II CU648_06570 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CU648_06570 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CU648_06580 PF00596 Class II Aldolase and Adducin N-terminal domain CU648_06585 PF03079 ARD/ARD' family CU648_06600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CU648_06600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CU648_06610 PF00990 Diguanylate cyclase, GGDEF domain CU648_06615 PF00881 Nitroreductase family CU648_06630 PF05524 PEP-utilising enzyme, N-terminal CU648_06630 PF00391 PEP-utilising enzyme, mobile domain CU648_06630 PF02896 PEP-utilising enzyme, TIM barrel domain CU648_06635 PF00381 PTS HPr component phosphorylation site CU648_06640 PF02378 Phosphotransferase system, EIIC CU648_06640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CU648_06640 PF00367 phosphotransferase system, EIIB CU648_06645 PF03123 CAT RNA binding domain CU648_06645 PF00874 PRD domain CU648_06660 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CU648_06665 PF01979 Amidohydrolase family CU648_06675 PF04079 Segregation and condensation complex subunit ScpB CU648_06685 PF02616 Segregation and condensation protein ScpA CU648_06695 PF03745 Domain of unknown function (DUF309) CU648_06700 PF00583 Acetyltransferase (GNAT) family CU648_06710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CU648_06715 PF06207 Protein of unknown function (DUF1002) CU648_06725 PF03323 Bacillus/Clostridium GerA spore germination protein CU648_06730 PF14097 Stage V sporulation protein AE1 CU648_06735 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CU648_06740 PF07451 Stage V sporulation protein AD (SpoVAD) CU648_06745 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CU648_06750 PF13782 Stage V sporulation protein AB CU648_06755 PF12164 Stage V sporulation protein AA CU648_06765 PF00209 Sodium:neurotransmitter symporter family CU648_06770 PF04539 Sigma-70 region 3 CU648_06770 PF04542 Sigma-70 region 2 CU648_06770 PF04545 Sigma-70, region 4 CU648_06775 PF13581 Histidine kinase-like ATPase domain CU648_06780 PF01740 STAS domain CU648_06785 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_06785 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_06795 PF00392 Bacterial regulatory proteins, gntR family CU648_06800 PF00005 ABC transporter CU648_06820 PF01047 MarR family CU648_06830 PF00860 Permease family CU648_06835 PF01544 CorA-like Mg2+ transporter protein CU648_06840 PF00591 Glycosyl transferase family, a/b domain CU648_06840 PF02885 Glycosyl transferase family, helical bundle domain CU648_06840 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CU648_06845 PF01048 Phosphorylase superfamily CU648_06850 PF01676 Metalloenzyme superfamily CU648_06860 PF02899 Phage integrase, N-terminal SAM-like domain CU648_06860 PF00589 Phage integrase family CU648_06865 PF14004 Protein of unknown function (DUF4227) CU648_06870 PF01475 Ferric uptake regulator family CU648_06875 PF01944 Stage II sporulation protein M CU648_06885 PF00293 NUDIX domain CU648_06890 PF13072 Mother cell inhibitor of FtsZ CU648_06895 PF00248 Aldo/keto reductase family CU648_06900 PF00248 Aldo/keto reductase family CU648_06905 PF04229 GrpB protein CU648_06905 PF13673 Acetyltransferase (GNAT) domain CU648_06915 PF02872 5'-nucleotidase, C-terminal domain CU648_06915 PF00746 LPXTG cell wall anchor motif CU648_06915 PF00149 Calcineurin-like phosphoesterase CU648_06915 PF00565 Staphylococcal nuclease homologue CU648_06925 PF12146 Serine aminopeptidase, S33 CU648_06930 PF13726 Na+-H+ antiporter family CU648_06930 PF03553 Na+/H+ antiporter family CU648_06935 PF00356 Bacterial regulatory proteins, lacI family CU648_06940 PF00583 Acetyltransferase (GNAT) family CU648_06945 PF12146 Serine aminopeptidase, S33 CU648_06950 PF10827 Protein of unknown function (DUF2552) CU648_06960 PF01872 RibD C-terminal domain CU648_06960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CU648_06965 PF00677 Lumazine binding domain CU648_06970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CU648_06970 PF00925 GTP cyclohydrolase II CU648_06975 PF00885 6,7-dimethyl-8-ribityllumazine synthase CU648_06985 PF06968 Biotin and Thiamin Synthesis associated domain CU648_06985 PF04055 Radical SAM superfamily CU648_06990 PF13847 Methyltransferase domain CU648_06995 PF12697 Alpha/beta hydrolase family CU648_07000 PF00155 Aminotransferase class I and II CU648_07010 PF00202 Aminotransferase class-III CU648_07030 PF00149 Calcineurin-like phosphoesterase CU648_07030 PF02872 5'-nucleotidase, C-terminal domain CU648_07040 PF13404 AsnC-type helix-turn-helix domain CU648_07040 PF01037 Lrp/AsnC ligand binding domain CU648_07055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CU648_07055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CU648_07060 PF00202 Aminotransferase class-III CU648_07065 PF00696 Amino acid kinase family CU648_07070 PF01960 ArgJ family CU648_07075 PF02774 Semialdehyde dehydrogenase, dimerisation domain CU648_07075 PF01118 Semialdehyde dehydrogenase, NAD binding domain CU648_07085 PF00106 short chain dehydrogenase CU648_07090 PF00753 Metallo-beta-lactamase superfamily CU648_07095 PF03807 NADP oxidoreductase coenzyme F420-dependent CU648_07095 PF14748 Pyrroline-5-carboxylate reductase dimerisation CU648_07100 PF03313 Serine dehydratase alpha chain CU648_07105 PF03315 Serine dehydratase beta chain CU648_07105 PF01842 ACT domain CU648_07115 PF12706 Beta-lactamase superfamily domain CU648_07115 PF00753 Metallo-beta-lactamase superfamily CU648_07130 PF11798 IMS family HHH motif CU648_07130 PF11799 impB/mucB/samB family C-terminal domain CU648_07130 PF00817 impB/mucB/samB family CU648_07140 PF07687 Peptidase dimerisation domain CU648_07140 PF01546 Peptidase family M20/M25/M40 CU648_07145 PF13302 Acetyltransferase (GNAT) domain CU648_07160 PF03734 L,D-transpeptidase catalytic domain CU648_07165 PF11728 Putative aromatic acid exporter C-terminal domain CU648_07165 PF06081 Aromatic acid exporter family member 1 CU648_07170 PF00005 ABC transporter CU648_07175 PF00528 Binding-protein-dependent transport system inner membrane component CU648_07180 PF00497 Bacterial extracellular solute-binding proteins, family 3 CU648_07190 PF06491 Disulphide isomerase CU648_07195 PF11208 Protein of unknown function (DUF2992) CU648_07200 PF00293 NUDIX domain CU648_07200 PF09297 NADH pyrophosphatase zinc ribbon domain CU648_07205 PF01098 Cell cycle protein CU648_07215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CU648_07215 PF00364 Biotin-requiring enzyme CU648_07215 PF02817 e3 binding domain CU648_07220 PF02780 Transketolase, C-terminal domain CU648_07220 PF02779 Transketolase, pyrimidine binding domain CU648_07225 PF00676 Dehydrogenase E1 component CU648_07230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CU648_07230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_07235 PF00871 Acetokinase family CU648_07240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CU648_07240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CU648_07245 PF01515 Phosphate acetyl/butaryl transferase CU648_07255 PF02954 Bacterial regulatory protein, Fis family CU648_07255 PF00158 Sigma-54 interaction domain CU648_07255 PF00989 PAS fold CU648_07265 PF03009 Glycerophosphoryl diester phosphodiesterase family CU648_07270 PF14174 YycC-like protein CU648_07280 PF08769 Sporulation initiation factor Spo0A C terminal CU648_07280 PF00072 Response regulator receiver domain CU648_07290 PF05580 SpoIVB peptidase S55 CU648_07290 PF17820 PDZ domain CU648_07295 PF13476 AAA domain CU648_07300 PF01316 Arginine repressor, DNA binding domain CU648_07300 PF02863 Arginine repressor, C-terminal domain CU648_07305 PF01479 S4 domain CU648_07305 PF01728 FtsJ-like methyltransferase CU648_07310 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CU648_07310 PF02780 Transketolase, C-terminal domain CU648_07310 PF02779 Transketolase, pyrimidine binding domain CU648_07315 PF00348 Polyprenyl synthetase CU648_07320 PF02609 Exonuclease VII small subunit CU648_07325 PF02601 Exonuclease VII, large subunit CU648_07325 PF13742 OB-fold nucleic acid binding domain CU648_07330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CU648_07330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CU648_07335 PF01029 NusB family CU648_07340 PF03780 Asp23 family, cell envelope-related function CU648_07345 PF02785 Biotin carboxylase C-terminal domain CU648_07345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CU648_07345 PF00289 Biotin carboxylase, N-terminal domain CU648_07350 PF00364 Biotin-requiring enzyme CU648_07360 PF12685 SpoIIIAH-like protein CU648_07370 PF09581 Stage III sporulation protein AF (Spore_III_AF) CU648_07375 PF09546 Stage III sporulation protein AE (spore_III_AE) CU648_07380 PF06686 Stage III sporulation protein AC/AD protein family CU648_07385 PF06686 Stage III sporulation protein AC/AD protein family CU648_07390 PF09548 Stage III sporulation protein AB (spore_III_AB) CU648_07415 PF08207 Elongation factor P (EF-P) KOW-like domain CU648_07415 PF01132 Elongation factor P (EF-P) OB domain CU648_07415 PF09285 Elongation factor P, C-terminal CU648_07420 PF00557 Metallopeptidase family M24 CU648_07420 PF01321 Creatinase/Prolidase N-terminal domain CU648_07425 PF01220 Dehydroquinase class II CU648_07430 PF11085 Conserved membrane protein YqhR CU648_07435 PF07136 Protein of unknown function (DUF1385) CU648_07445 PF13419 Haloacid dehalogenase-like hydrolase CU648_07450 PF02742 Iron dependent repressor, metal binding and dimerisation domain CU648_07450 PF01325 Iron dependent repressor, N-terminal DNA binding domain CU648_07465 PF03099 Biotin/lipoate A/B protein ligase family CU648_07470 PF00581 Rhodanese-like domain CU648_07475 PF00356 Bacterial regulatory proteins, lacI family CU648_07475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CU648_07485 PF00893 Small Multidrug Resistance protein CU648_07490 PF00893 Small Multidrug Resistance protein CU648_07530 PF00005 ABC transporter CU648_07535 PF00392 Bacterial regulatory proteins, gntR family CU648_07555 PF02347 Glycine cleavage system P-protein CU648_07560 PF02347 Glycine cleavage system P-protein CU648_07565 PF01571 Aminomethyltransferase folate-binding domain CU648_07565 PF08669 Glycine cleavage T-protein C-terminal barrel domain CU648_07570 PF00176 SNF2 family N-terminal domain CU648_07570 PF00271 Helicase conserved C-terminal domain CU648_07575 PF11079 Bacterial protein YqhG of unknown function CU648_07615 PF12833 Helix-turn-helix domain CU648_07615 PF02805 Metal binding domain of Ada CU648_07620 PF00730 HhH-GPD superfamily base excision DNA repair protein CU648_07620 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CU648_07645 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CU648_07650 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CU648_07650 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CU648_07655 PF02805 Metal binding domain of Ada CU648_07655 PF12833 Helix-turn-helix domain CU648_07660 PF00206 Lyase CU648_07660 PF02655 ATP-grasp domain CU648_07665 PF07859 alpha/beta hydrolase fold CU648_07690 PF14038 YqzE-like protein CU648_07695 PF01202 Shikimate kinase CU648_07720 PF07963 Prokaryotic N-terminal methylation motif CU648_07730 PF00482 Type II secretion system (T2SS), protein F CU648_07735 PF00437 Type II/IV secretion system protein CU648_07745 PF11117 Protein of unknown function (DUF2626) CU648_07750 PF00375 Sodium:dicarboxylate symporter family CU648_07785 PF03033 Glycosyltransferase family 28 N-terminal domain CU648_07785 PF04101 Glycosyltransferase family 28 C-terminal domain CU648_07790 PF02607 B12 binding domain CU648_07790 PF02310 B12 binding domain CU648_07790 PF02574 Homocysteine S-methyltransferase CU648_07790 PF02965 Vitamin B12 dependent methionine synthase, activation domain CU648_07790 PF00809 Pterin binding enzyme CU648_07795 PF02574 Homocysteine S-methyltransferase CU648_07795 PF02219 Methylenetetrahydrofolate reductase CU648_07800 PF01053 Cys/Met metabolism PLP-dependent enzyme CU648_07805 PF01053 Cys/Met metabolism PLP-dependent enzyme CU648_07815 PF01022 Bacterial regulatory protein, arsR family CU648_07825 PF00753 Metallo-beta-lactamase superfamily CU648_07830 PF10958 Protein of unknown function (DUF2759) CU648_07835 PF00480 ROK family CU648_07840 PF06014 Bacterial protein of unknown function (DUF910) CU648_07845 PF01812 5-formyltetrahydrofolate cyclo-ligase family CU648_07850 PF00471 Ribosomal protein L33 CU648_07855 PF00483 Nucleotidyl transferase CU648_07860 PF01895 PhoU domain CU648_07865 PF00005 ABC transporter CU648_07870 PF00528 Binding-protein-dependent transport system inner membrane component CU648_07875 PF00528 Binding-protein-dependent transport system inner membrane component CU648_07880 PF12849 PBP superfamily domain CU648_07890 PF07690 Major Facilitator Superfamily CU648_07895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CU648_07895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CU648_07915 PF04551 GcpE protein CU648_07920 PF01475 Ferric uptake regulator family CU648_07925 PF00950 ABC 3 transport family CU648_07930 PF00005 ABC transporter CU648_07935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_07935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_07940 PF11116 Protein of unknown function (DUF2624) CU648_07945 PF01261 Xylose isomerase-like TIM barrel CU648_07950 PF00270 DEAD/DEAH box helicase CU648_07950 PF00271 Helicase conserved C-terminal domain CU648_07960 PF02401 LytB protein CU648_07965 PF01784 NIF3 (NGG1p interacting factor 3) CU648_07970 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CU648_07975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CU648_07980 PF04545 Sigma-70, region 4 CU648_07980 PF03979 Sigma-70 factor, region 1.1 CU648_07980 PF00140 Sigma-70 factor, region 1.2 CU648_07980 PF04539 Sigma-70 region 3 CU648_07980 PF04542 Sigma-70 region 2 CU648_07985 PF01807 CHC2 zinc finger CU648_07985 PF10410 DnaB-helicase binding domain of primase CU648_07985 PF08275 DNA primase catalytic core, N-terminal domain CU648_08000 PF03618 Kinase/pyrophosphorylase CU648_08005 PF08279 HTH domain CU648_08005 PF00571 CBS domain CU648_08010 PF11967 Recombination protein O N terminal CU648_08010 PF02565 Recombination protein O C terminal CU648_08020 PF07650 KH domain CU648_08020 PF01926 50S ribosome-binding GTPase CU648_08025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CU648_08030 PF01219 Prokaryotic diacylglycerol kinase CU648_08035 PF02130 Uncharacterized protein family UPF0054 CU648_08040 PF01966 HD domain CU648_08040 PF07698 7TM receptor with intracellular HD hydrolase CU648_08040 PF07697 7TM-HD extracellular CU648_08045 PF02562 PhoH-like protein CU648_08050 PF06898 Putative stage IV sporulation protein YqfD CU648_08060 PF07873 YabP family CU648_08065 PF09424 Yqey-like protein CU648_08070 PF01165 Ribosomal protein S21 CU648_08075 PF00919 Uncharacterized protein family UPF0004 CU648_08075 PF01938 TRAM domain CU648_08075 PF04055 Radical SAM superfamily CU648_08080 PF04452 RNA methyltransferase CU648_08090 PF00684 DnaJ central domain CU648_08090 PF01556 DnaJ C terminal domain CU648_08090 PF00226 DnaJ domain CU648_08095 PF00012 Hsp70 protein CU648_08100 PF01025 GrpE CU648_08105 PF01628 HrcA protein C terminal domain CU648_08110 PF04055 Radical SAM superfamily CU648_08110 PF06969 HemN C-terminal domain CU648_08115 PF01638 HxlR-like helix-turn-helix CU648_08120 PF03144 Elongation factor Tu domain 2 CU648_08120 PF00009 Elongation factor Tu GTP binding domain CU648_08120 PF00679 Elongation factor G C-terminus CU648_08120 PF06421 GTP-binding protein LepA C-terminus CU648_08130 PF03418 Germination protease CU648_08135 PF01649 Ribosomal protein S20 CU648_08140 PF06144 DNA polymerase III, delta subunit CU648_08145 PF14141 YqzM-like protein CU648_08150 PF03772 Competence protein CU648_08150 PF00753 Metallo-beta-lactamase superfamily CU648_08150 PF13567 Domain of unknown function (DUF4131) CU648_08155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CU648_08160 PF10531 SLBB domain CU648_08165 PF14748 Pyrroline-5-carboxylate reductase dimerisation CU648_08165 PF03807 NADP oxidoreductase coenzyme F420-dependent CU648_08170 PF13649 Methyltransferase domain CU648_08180 PF01966 HD domain CU648_08185 PF01467 Cytidylyltransferase-like CU648_08190 PF01985 CRS1 / YhbY (CRM) domain CU648_08195 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CU648_08195 PF08501 Shikimate dehydrogenase substrate binding domain CU648_08195 PF01488 Shikimate / quinate 5-dehydrogenase CU648_08200 PF01926 50S ribosome-binding GTPase CU648_08215 PF02666 Phosphatidylserine decarboxylase CU648_08220 PF04545 Sigma-70, region 4 CU648_08220 PF04542 Sigma-70 region 2 CU648_08230 PF16244 Domain of unknown function (DUF4901) CU648_08235 PF00471 Ribosomal protein L33 CU648_08240 PF00881 Nitroreductase family CU648_08245 PF04607 Region found in RelA / SpoT proteins CU648_08255 PF00245 Alkaline phosphatase CU648_08265 PF00561 alpha/beta hydrolase fold CU648_08265 PF08386 TAP-like protein CU648_08300 PF02225 PA domain CU648_08300 PF13860 FlgD Ig-like domain CU648_08300 PF00082 Subtilase family CU648_08300 PF05922 Peptidase inhibitor I9 CU648_08305 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CU648_08315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_08320 PF07681 DoxX CU648_08350 PF00005 ABC transporter CU648_08355 PF01032 FecCD transport family CU648_08360 PF01497 Periplasmic binding protein CU648_08365 PF14143 YrhC-like protein CU648_08370 PF00465 Iron-containing alcohol dehydrogenase CU648_08370 PF00171 Aldehyde dehydrogenase family CU648_08375 PF01053 Cys/Met metabolism PLP-dependent enzyme CU648_08380 PF00291 Pyridoxal-phosphate dependent enzyme CU648_08385 PF01048 Phosphorylase superfamily CU648_08390 PF08241 Methyltransferase domain CU648_08405 PF00905 Penicillin binding protein transpeptidase domain CU648_08405 PF03717 Penicillin-binding Protein dimerisation domain CU648_08410 PF01272 Transcription elongation factor, GreA/GreB, C-term CU648_08410 PF03449 Transcription elongation factor, N-terminal CU648_08415 PF00485 Phosphoribulokinase / Uridine kinase family CU648_08435 PF02618 YceG-like family CU648_08440 PF06949 Protein of unknown function (DUF1292) CU648_08445 PF03652 Holliday junction resolvase CU648_08450 PF06135 IreB regulatory phosphoprotein CU648_08455 PF01411 tRNA synthetases class II (A) CU648_08455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CU648_08455 PF02272 DHHA1 domain CU648_08465 PF01594 AI-2E family transporter CU648_08485 PF14490 Helix-hairpin-helix containing domain CU648_08485 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CU648_08485 PF13538 UvrD-like helicase C-terminal domain CU648_08500 PF00266 Aminotransferase class-V CU648_08505 PF02082 Transcriptional regulator CU648_08510 PF16193 AAA C-terminal domain CU648_08510 PF05496 Holliday junction DNA helicase RuvB P-loop domain CU648_08510 PF12002 MgsA AAA+ ATPase C terminal CU648_08525 PF00899 ThiF family CU648_08530 PF00152 tRNA synthetases class II (D, K and N) CU648_08530 PF02938 GAD domain CU648_08530 PF01336 OB-fold nucleic acid binding domain CU648_08535 PF13393 Histidyl-tRNA synthetase CU648_08535 PF03129 Anticodon binding domain CU648_08550 PF02580 D-Tyr-tRNA(Tyr) deacylase CU648_08555 PF04607 Region found in RelA / SpoT proteins CU648_08555 PF02824 TGS domain CU648_08555 PF13291 ACT domain CU648_08560 PF00156 Phosphoribosyl transferase domain CU648_08565 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CU648_08565 PF17768 RecJ OB domain CU648_08565 PF01368 DHH family CU648_08565 PF02272 DHHA1 domain CU648_08570 PF16916 Dimerisation domain of Zinc Transporter CU648_08570 PF01545 Cation efflux family CU648_08575 PF02355 Protein export membrane protein CU648_08575 PF07549 SecD/SecF GG Motif CU648_08580 PF13797 Post-transcriptional regulator CU648_08585 PF14667 Polysaccharide biosynthesis C-terminal domain CU648_08585 PF01943 Polysaccharide biosynthesis protein CU648_08590 PF04239 Protein of unknown function (DUF421) CU648_08600 PF02699 Preprotein translocase subunit CU648_08605 PF01702 Queuine tRNA-ribosyltransferase CU648_08610 PF02547 Queuosine biosynthesis protein CU648_08615 PF11146 Protein of unknown function (DUF2905) CU648_08620 PF05496 Holliday junction DNA helicase RuvB P-loop domain CU648_08620 PF05491 RuvB C-terminal winged helix domain CU648_08620 PF17864 RuvB AAA lid domain CU648_08625 PF07499 RuvA, C-terminal domain CU648_08625 PF01330 RuvA N terminal domain CU648_08630 PF01497 Periplasmic binding protein CU648_08655 PF01476 LysM domain CU648_08660 PF02445 Quinolinate synthetase A protein CU648_08665 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CU648_08665 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CU648_08670 PF02910 Fumarate reductase flavoprotein C-term CU648_08670 PF00890 FAD binding domain CU648_08675 PF00266 Aminotransferase class-V CU648_08680 PF02829 3H domain CU648_08680 PF08279 HTH domain CU648_08685 PF03475 3-alpha domain CU648_08685 PF03473 MOSC domain CU648_08690 PF01842 ACT domain CU648_08690 PF00800 Prephenate dehydratase CU648_08695 PF02687 FtsX-like permease family CU648_08700 PF02687 FtsX-like permease family CU648_08705 PF00005 ABC transporter CU648_08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_08715 PF00486 Transcriptional regulatory protein, C terminal CU648_08715 PF00072 Response regulator receiver domain CU648_08720 PF09269 Domain of unknown function (DUF1967) CU648_08720 PF01018 GTP1/OBG CU648_08720 PF01926 50S ribosome-binding GTPase CU648_08725 PF14682 Sporulation initiation phospho-transferase B, C-terminal CU648_08725 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CU648_08730 PF01016 Ribosomal L27 protein CU648_08735 PF04327 Cysteine protease Prp CU648_08740 PF00829 Ribosomal prokaryotic L21 protein CU648_08745 PF00575 S1 RNA binding domain CU648_08745 PF10150 Ribonuclease E/G family CU648_08750 PF02163 Peptidase family M50 CU648_08755 PF01551 Peptidase family M23 CU648_08760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CU648_08765 PF03775 Septum formation inhibitor MinC, C-terminal domain CU648_08775 PF04085 rod shape-determining protein MreC CU648_08790 PF07690 Major Facilitator Superfamily CU648_08795 PF02525 Flavodoxin-like fold CU648_08805 PF00589 Phage integrase family CU648_08810 PF00589 Phage integrase family CU648_08810 PF02899 Phage integrase, N-terminal SAM-like domain CU648_08820 PF02545 Maf-like protein CU648_08835 PF08245 Mur ligase middle domain CU648_08835 PF02875 Mur ligase family, glutamate ligase domain CU648_08840 PF00133 tRNA synthetases class I (I, L, M and V) CU648_08840 PF10458 Valyl tRNA synthetase tRNA binding arm CU648_08840 PF08264 Anticodon-binding domain of tRNA CU648_08850 PF01476 LysM domain CU648_08855 PF00202 Aminotransferase class-III CU648_08860 PF00490 Delta-aminolevulinic acid dehydratase CU648_08865 PF02602 Uroporphyrinogen-III synthase HemD CU648_08870 PF03900 Porphobilinogen deaminase, C-terminal domain CU648_08870 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CU648_08875 PF01578 Cytochrome C assembly protein CU648_08880 PF01488 Shikimate / quinate 5-dehydrogenase CU648_08880 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CU648_08880 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CU648_08885 PF01047 MarR family CU648_08890 PF02566 OsmC-like protein CU648_08895 PF01926 50S ribosome-binding GTPase CU648_08900 PF02190 ATP-dependent protease La (LON) substrate-binding domain CU648_08900 PF05362 Lon protease (S16) C-terminal proteolytic domain CU648_08900 PF00004 ATPase family associated with various cellular activities (AAA) CU648_08905 PF00004 ATPase family associated with various cellular activities (AAA) CU648_08905 PF05362 Lon protease (S16) C-terminal proteolytic domain CU648_08910 PF07724 AAA domain (Cdc48 subfamily) CU648_08910 PF06689 ClpX C4-type zinc finger CU648_08910 PF10431 C-terminal, D2-small domain, of ClpB protein CU648_08915 PF05697 Bacterial trigger factor protein (TF) CU648_08915 PF05698 Bacterial trigger factor protein (TF) C-terminus CU648_08915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CU648_08935 PF11724 YvbH-like oligomerisation region CU648_08935 PF08000 Bacterial PH domain CU648_08960 PF12850 Calcineurin-like phosphoesterase superfamily domain CU648_08965 PF01725 Ham1 family CU648_08970 PF03725 3' exoribonuclease family, domain 2 CU648_08970 PF01138 3' exoribonuclease family, domain 1 CU648_08975 PF10646 Sporulation and spore germination CU648_08980 PF01177 Asp/Glu/Hydantoin racemase CU648_08985 PF07690 Major Facilitator Superfamily CU648_08995 PF00440 Bacterial regulatory proteins, tetR family CU648_09000 PF01965 DJ-1/PfpI family CU648_09010 PF00196 Bacterial regulatory proteins, luxR family CU648_09015 PF00860 Permease family CU648_09025 PF07969 Amidohydrolase family CU648_09030 PF07969 Amidohydrolase family CU648_09035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_09045 PF00528 Binding-protein-dependent transport system inner membrane component CU648_09050 PF00005 ABC transporter CU648_09050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_09055 PF00005 ABC transporter CU648_09055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_09060 PF06580 Histidine kinase CU648_09060 PF07694 5TMR of 5TMR-LYT CU648_09065 PF04397 LytTr DNA-binding domain CU648_09065 PF00072 Response regulator receiver domain CU648_09075 PF04024 PspC domain CU648_09080 PF01381 Helix-turn-helix CU648_09080 PF07883 Cupin domain CU648_09085 PF13536 Putative multidrug resistance efflux transporter CU648_09090 PF00230 Major intrinsic protein CU648_09095 PF02082 Transcriptional regulator CU648_09105 PF00005 ABC transporter CU648_09105 PF13732 Domain of unknown function (DUF4162) CU648_09110 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CU648_09115 PF00691 OmpA family CU648_09115 PF13677 Membrane MotB of proton-channel complex MotA/MotB CU648_09120 PF01618 MotA/TolQ/ExbB proton channel family CU648_09125 PF02557 D-alanyl-D-alanine carboxypeptidase CU648_09130 PF03061 Thioesterase superfamily CU648_09135 PF13183 4Fe-4S dicluster domain CU648_09135 PF13085 2Fe-2S iron-sulfur cluster binding domain CU648_09140 PF02910 Fumarate reductase flavoprotein C-term CU648_09140 PF00890 FAD binding domain CU648_09145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CU648_09150 PF10702 Protein of unknown function (DUF2507) CU648_09155 PF01541 GIY-YIG catalytic domain CU648_09155 PF02151 UvrB/uvrC motif CU648_09155 PF08459 UvrC Helix-hairpin-helix N-terminal CU648_09160 PF00085 Thioredoxin CU648_09165 PF01012 Electron transfer flavoprotein domain CU648_09165 PF00766 Electron transfer flavoprotein FAD-binding domain CU648_09170 PF01012 Electron transfer flavoprotein domain CU648_09175 PF00378 Enoyl-CoA hydratase/isomerase CU648_09180 PF00440 Bacterial regulatory proteins, tetR family CU648_09180 PF08359 YsiA-like protein, C-terminal region CU648_09185 PF13193 AMP-binding enzyme C-terminal domain CU648_09185 PF00501 AMP-binding enzyme CU648_09200 PF01497 Periplasmic binding protein CU648_09205 PF01032 FecCD transport family CU648_09210 PF05163 DinB family CU648_09235 PF00005 ABC transporter CU648_09240 PF00512 His Kinase A (phospho-acceptor) domain CU648_09240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_09245 PF00072 Response regulator receiver domain CU648_09245 PF00486 Transcriptional regulatory protein, C terminal CU648_09255 PF09962 Uncharacterized conserved protein (DUF2196) CU648_09260 PF10672 S-adenosylmethionine-dependent methyltransferase CU648_09260 PF17785 PUA-like domain CU648_09270 PF03992 Antibiotic biosynthesis monooxygenase CU648_09275 PF04203 Sortase domain CU648_09280 PF00005 ABC transporter CU648_09285 PF01032 FecCD transport family CU648_09290 PF01497 Periplasmic binding protein CU648_09295 PF05031 Iron Transport-associated domain CU648_09300 PF05031 Iron Transport-associated domain CU648_09305 PF05525 Branched-chain amino acid transport protein CU648_09310 PF00849 RNA pseudouridylate synthase CU648_09310 PF01479 S4 domain CU648_09320 PF01713 Smr domain CU648_09320 PF00488 MutS domain V CU648_09325 PF02811 PHP domain CU648_09325 PF14716 Helix-hairpin-helix domain CU648_09325 PF14791 DNA polymerase beta thumb CU648_09330 PF02674 Colicin V production protein CU648_09335 PF05164 Cell division protein ZapA CU648_09340 PF11858 Domain of unknown function (DUF3378) CU648_09340 PF01351 Ribonuclease HII CU648_09360 PF00152 tRNA synthetases class II (D, K and N) CU648_09360 PF01336 OB-fold nucleic acid binding domain CU648_09365 PF03483 B3/4 domain CU648_09365 PF03484 tRNA synthetase B5 domain CU648_09365 PF03147 Ferredoxin-fold anticodon binding domain CU648_09365 PF01588 Putative tRNA binding domain CU648_09365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CU648_09370 PF01409 tRNA synthetases class II core domain (F) CU648_09370 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CU648_09375 PF00588 SpoU rRNA Methylase family CU648_09375 PF08032 RNA 2'-O ribose methyltransferase substrate binding CU648_09380 PF14098 Small, acid-soluble spore protein I CU648_09385 PF01966 HD domain CU648_09415 PF07690 Major Facilitator Superfamily CU648_09425 PF16859 Tetracyclin repressor-like, C-terminal domain CU648_09425 PF00440 Bacterial regulatory proteins, tetR family CU648_09430 PF05343 M42 glutamyl aminopeptidase CU648_09440 PF00453 Ribosomal protein L20 CU648_09445 PF01632 Ribosomal protein L35 CU648_09450 PF00707 Translation initiation factor IF-3, C-terminal domain CU648_09450 PF05198 Translation initiation factor IF-3, N-terminal domain CU648_09455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CU648_09455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CU648_09455 PF02824 TGS domain CU648_09455 PF03129 Anticodon binding domain CU648_09460 PF08812 YtxC-like family CU648_09465 PF07319 Primosomal protein DnaI N-terminus CU648_09465 PF01695 IstB-like ATP binding protein CU648_09470 PF07261 Replication initiation and membrane attachment CU648_09475 PF03477 ATP cone domain CU648_09480 PF02675 S-adenosylmethionine decarboxylase CU648_09490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CU648_09490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU648_09495 PF01121 Dephospho-CoA kinase CU648_09500 PF02659 Putative manganese efflux pump CU648_09505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CU648_09505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CU648_09505 PF06827 Zinc finger found in FPG and IleRS CU648_09510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CU648_09510 PF00476 DNA polymerase family A CU648_09510 PF01367 5'-3' exonuclease, C-terminal SAM fold CU648_09515 PF16736 Single Cache-like CU648_09515 PF00989 PAS fold CU648_09515 PF00512 His Kinase A (phospho-acceptor) domain CU648_09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_09520 PF00072 Response regulator receiver domain CU648_09520 PF00486 Transcriptional regulatory protein, C terminal CU648_09540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CU648_09540 PF00056 lactate/malate dehydrogenase, NAD binding domain CU648_09545 PF00180 Isocitrate/isopropylmalate dehydrogenase CU648_09550 PF00285 Citrate synthase, C-terminal domain CU648_09560 PF04284 Protein of unknown function (DUF441) CU648_09565 PF01594 AI-2E family transporter CU648_09570 PF04186 FxsA cytoplasmic membrane protein CU648_09575 PF02887 Pyruvate kinase, alpha/beta domain CU648_09575 PF00224 Pyruvate kinase, barrel domain CU648_09575 PF00391 PEP-utilising enzyme, mobile domain CU648_09580 PF00365 Phosphofructokinase CU648_09585 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CU648_09590 PF01039 Carboxyl transferase domain CU648_09590 PF17848 Acetyl-coA carboxylase zinc finger domain CU648_09595 PF00392 Bacterial regulatory proteins, gntR family CU648_09600 PF03949 Malic enzyme, NAD binding domain CU648_09600 PF00390 Malic enzyme, N-terminal domain CU648_09605 PF01336 OB-fold nucleic acid binding domain CU648_09605 PF07733 Bacterial DNA polymerase III alpha NTPase domain CU648_09605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CU648_09605 PF02811 PHP domain CU648_09605 PF14579 Helix-hairpin-helix motif CU648_09610 PF14034 Sporulation protein YtrH CU648_09620 PF02272 DHHA1 domain CU648_09620 PF01368 DHH family CU648_09630 PF14007 YtpI-like protein CU648_09640 PF01636 Phosphotransferase enzyme family CU648_09650 PF03061 Thioesterase superfamily CU648_09650 PF07085 DRTGG domain CU648_09650 PF00392 Bacterial regulatory proteins, gntR family CU648_09650 PF00571 CBS domain CU648_09665 PF00557 Metallopeptidase family M24 CU648_09665 PF01321 Creatinase/Prolidase N-terminal domain CU648_09690 PF04542 Sigma-70 region 2 CU648_09690 PF08281 Sigma-70, region 4 CU648_09705 PF07883 Cupin domain CU648_09715 PF01381 Helix-turn-helix CU648_09725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CU648_09725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CU648_09735 PF00582 Universal stress protein family CU648_09755 PF14698 Argininosuccinate lyase C-terminal CU648_09755 PF00206 Lyase CU648_09760 PF00764 Arginosuccinate synthase CU648_09785 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_09785 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_09790 PF12787 EcsC protein family CU648_09805 PF00871 Acetokinase family CU648_09810 PF02384 N-6 DNA Methylase CU648_09815 PF08534 Redoxin CU648_09820 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CU648_09830 PF01513 ATP-NAD kinase CU648_09835 PF07969 Amidohydrolase family CU648_09845 PF00501 AMP-binding enzyme CU648_09845 PF13193 AMP-binding enzyme C-terminal domain CU648_09850 PF00269 Small, acid-soluble spore proteins, alpha/beta type CU648_09855 PF02568 Thiamine biosynthesis protein (ThiI) CU648_09855 PF02926 THUMP domain CU648_09860 PF00266 Aminotransferase class-V CU648_09865 PF06160 Septation ring formation regulator, EzrA CU648_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_09870 PF03466 LysR substrate binding domain CU648_09875 PF00892 EamA-like transporter family CU648_09880 PF00440 Bacterial regulatory proteins, tetR family CU648_09885 PF13185 GAF domain CU648_09890 PF01053 Cys/Met metabolism PLP-dependent enzyme CU648_09900 PF01479 S4 domain CU648_09900 PF00163 Ribosomal protein S4/S9 N-terminal domain CU648_09940 PF00579 tRNA synthetases class I (W and Y) CU648_09940 PF01479 S4 domain CU648_09950 PF04542 Sigma-70 region 2 CU648_09950 PF08281 Sigma-70, region 4 CU648_09965 PF00501 AMP-binding enzyme CU648_09965 PF13193 AMP-binding enzyme C-terminal domain CU648_09970 PF00583 Acetyltransferase (GNAT) family CU648_09975 PF00571 CBS domain CU648_09980 PF00850 Histone deacetylase domain CU648_09990 PF00072 Response regulator receiver domain CU648_09990 PF00486 Transcriptional regulatory protein, C terminal CU648_09995 PF00512 His Kinase A (phospho-acceptor) domain CU648_09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_09995 PF16736 Single Cache-like CU648_09995 PF00989 PAS fold CU648_10005 PF12796 Ankyrin repeats (3 copies) CU648_10010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CU648_10015 PF01741 Large-conductance mechanosensitive channel, MscL CU648_10040 PF00356 Bacterial regulatory proteins, lacI family CU648_10055 PF07537 CamS sex pheromone cAM373 precursor CU648_10060 PF11009 Protein of unknown function (DUF2847) CU648_10070 PF02073 Thermophilic metalloprotease (M29) CU648_10090 PF13302 Acetyltransferase (GNAT) domain CU648_10095 PF03551 Transcriptional regulator PadR-like family CU648_10105 PF08245 Mur ligase middle domain CU648_10105 PF02875 Mur ligase family, glutamate ligase domain CU648_10105 PF01225 Mur ligase family, catalytic domain CU648_10115 PF09397 Ftsk gamma domain CU648_10115 PF17854 FtsK alpha domain CU648_10115 PF01580 FtsK/SpoIIIE family CU648_10125 PF14794 Domain of unknown function (DUF4479) CU648_10125 PF01588 Putative tRNA binding domain CU648_10130 PF07285 Protein of unknown function (DUF1444) CU648_10135 PF00085 Thioredoxin CU648_10140 PF01931 Protein of unknown function DUF84 CU648_10145 PF05343 M42 glutamyl aminopeptidase CU648_10155 PF00753 Metallo-beta-lactamase superfamily CU648_10160 PF02390 Putative methyltransferase CU648_10165 PF14165 YtzH-like protein CU648_10170 PF01636 Phosphotransferase enzyme family CU648_10175 PF00128 Alpha amylase, catalytic domain CU648_10175 PF17999 Pullulanase N1-terminal domain CU648_10175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CU648_10185 PF02834 LigT like Phosphoesterase CU648_10190 PF01546 Peptidase family M20/M25/M40 CU648_10195 PF08220 DeoR-like helix-turn-helix domain CU648_10200 PF01479 S4 domain CU648_10200 PF00849 RNA pseudouridylate synthase CU648_10205 PF14667 Polysaccharide biosynthesis C-terminal domain CU648_10205 PF01943 Polysaccharide biosynthesis protein CU648_10215 PF07690 Major Facilitator Superfamily CU648_10220 PF01022 Bacterial regulatory protein, arsR family CU648_10225 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CU648_10240 PF10957 Sporulation protein Cse60 CU648_10250 PF02559 CarD-like/TRCF domain CU648_10260 PF06800 Sugar transport protein CU648_10275 PF02391 MoaE protein CU648_10280 PF12323 Helix-turn-helix domain CU648_10280 PF01385 Probable transposase CU648_10280 PF07282 Putative transposase DNA-binding domain CU648_10290 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CU648_10295 PF03453 MoeA N-terminal region (domain I and II) CU648_10295 PF03454 MoeA C-terminal region (domain IV) CU648_10295 PF00994 Probable molybdopterin binding domain CU648_10300 PF01967 MoaC family CU648_10305 PF00899 ThiF family CU648_10310 PF06463 Molybdenum Cofactor Synthesis C CU648_10310 PF04055 Radical SAM superfamily CU648_10330 PF00581 Rhodanese-like domain CU648_10340 PF00561 alpha/beta hydrolase fold CU648_10345 PF03323 Bacillus/Clostridium GerA spore germination protein CU648_10350 PF03845 Spore germination protein CU648_10380 PF08264 Anticodon-binding domain of tRNA CU648_10380 PF00133 tRNA synthetases class I (I, L, M and V) CU648_10380 PF09334 tRNA synthetases class I (M) CU648_10380 PF13603 Leucyl-tRNA synthetase, Domain 2 CU648_10385 PF07690 Major Facilitator Superfamily CU648_10390 PF00999 Sodium/hydrogen exchanger family CU648_10395 PF02080 TrkA-C domain CU648_10400 PF00589 Phage integrase family CU648_10410 PF00005 ABC transporter CU648_10420 PF04235 Protein of unknown function (DUF418) CU648_10420 PF07786 Protein of unknown function (DUF1624) CU648_10430 PF10732 Protein of unknown function (DUF2524) CU648_10435 PF04055 Radical SAM superfamily CU648_10435 PF16199 Radical_SAM C-terminal domain CU648_10440 PF06962 Putative rRNA methylase CU648_10445 PF00005 ABC transporter CU648_10455 PF01177 Asp/Glu/Hydantoin racemase CU648_10475 PF10776 Protein of unknown function (DUF2600) CU648_10480 PF12146 Serine aminopeptidase, S33 CU648_10485 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_10490 PF01569 PAP2 superfamily CU648_10495 PF00534 Glycosyl transferases group 1 CU648_10495 PF13439 Glycosyltransferase Family 4 CU648_10500 PF12804 MobA-like NTP transferase domain CU648_10505 PF00994 Probable molybdopterin binding domain CU648_10525 PF02773 S-adenosylmethionine synthetase, C-terminal domain CU648_10525 PF02772 S-adenosylmethionine synthetase, central domain CU648_10525 PF00438 S-adenosylmethionine synthetase, N-terminal domain CU648_10535 PF01293 Phosphoenolpyruvate carboxykinase CU648_10570 PF01784 NIF3 (NGG1p interacting factor 3) CU648_10575 PF13188 PAS domain CU648_10575 PF00989 PAS fold CU648_10575 PF00512 His Kinase A (phospho-acceptor) domain CU648_10575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_10575 PF13426 PAS domain CU648_10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_10580 PF00512 His Kinase A (phospho-acceptor) domain CU648_10580 PF08447 PAS fold CU648_10580 PF00989 PAS fold CU648_10585 PF08386 TAP-like protein CU648_10585 PF00561 alpha/beta hydrolase fold CU648_10590 PF00884 Sulfatase CU648_10615 PF00005 ABC transporter CU648_10620 PF00528 Binding-protein-dependent transport system inner membrane component CU648_10635 PF13419 Haloacid dehalogenase-like hydrolase CU648_10645 PF00293 NUDIX domain CU648_10675 PF02664 S-Ribosylhomocysteinase (LuxS) CU648_10680 PF01809 Putative membrane protein insertion efficiency factor CU648_10685 PF00484 Carbonic anhydrase CU648_10690 PF01654 Cytochrome bd terminal oxidase subunit I CU648_10695 PF02322 Cytochrome bd terminal oxidase subunit II CU648_10700 PF10676 Spore germination protein gerPA/gerPF CU648_10735 PF07690 Major Facilitator Superfamily CU648_10745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_10745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_10770 PF04012 PspA/IM30 family CU648_10800 PF07670 Nucleoside recognition CU648_10800 PF17910 FeoB cytosolic helical domain CU648_10800 PF02421 Ferrous iron transport protein B CU648_10800 PF07664 Ferrous iron transport protein B C terminus CU648_10810 PF09515 Thiamine transporter protein (Thia_YuaJ) CU648_10825 PF00512 His Kinase A (phospho-acceptor) domain CU648_10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_10825 PF00672 HAMP domain CU648_10830 PF00072 Response regulator receiver domain CU648_10830 PF00486 Transcriptional regulatory protein, C terminal CU648_10860 PF00781 Diacylglycerol kinase catalytic domain CU648_10875 PF02687 FtsX-like permease family CU648_10880 PF00005 ABC transporter CU648_10895 PF09335 SNARE associated Golgi protein CU648_10900 PF00398 Ribosomal RNA adenine dimethylase CU648_10905 PF02311 AraC-like ligand binding domain CU648_10905 PF12833 Helix-turn-helix domain CU648_10915 PF02687 FtsX-like permease family CU648_10920 PF00005 ABC transporter CU648_10925 PF06445 GyrI-like small molecule binding domain CU648_10925 PF12833 Helix-turn-helix domain CU648_10930 PF00072 Response regulator receiver domain CU648_10930 PF00486 Transcriptional regulatory protein, C terminal CU648_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_10940 PF02687 FtsX-like permease family CU648_10945 PF02687 FtsX-like permease family CU648_10950 PF00005 ABC transporter CU648_10955 PF02687 FtsX-like permease family CU648_10965 PF02447 GntP family permease CU648_10980 PF07071 KDGP aldolase CU648_10985 PF03841 L-seryl-tRNA selenium transferase CU648_10990 PF01979 Amidohydrolase family CU648_10995 PF02557 D-alanyl-D-alanine carboxypeptidase CU648_11000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_11000 PF00512 His Kinase A (phospho-acceptor) domain CU648_11005 PF00486 Transcriptional regulatory protein, C terminal CU648_11005 PF00072 Response regulator receiver domain CU648_11010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CU648_11010 PF13378 Enolase C-terminal domain-like CU648_11015 PF13193 AMP-binding enzyme C-terminal domain CU648_11015 PF00501 AMP-binding enzyme CU648_11025 PF00378 Enoyl-CoA hydratase/isomerase CU648_11030 PF00561 alpha/beta hydrolase fold CU648_11035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CU648_11035 PF16582 Middle domain of thiamine pyrophosphate CU648_11035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CU648_11040 PF00425 chorismate binding enzyme CU648_11045 PF01040 UbiA prenyltransferase family CU648_11050 PF01258 Prokaryotic dksA/traR C4-type zinc finger CU648_11055 PF00313 'Cold-shock' DNA-binding domain CU648_11075 PF00343 Carbohydrate phosphorylase CU648_11080 PF00534 Glycosyl transferases group 1 CU648_11080 PF08323 Starch synthase catalytic domain CU648_11085 PF00483 Nucleotidyl transferase CU648_11090 PF00483 Nucleotidyl transferase CU648_11095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CU648_11095 PF00128 Alpha amylase, catalytic domain CU648_11095 PF02806 Alpha amylase, C-terminal all-beta domain CU648_11105 PF02225 PA domain CU648_11105 PF05922 Peptidase inhibitor I9 CU648_11105 PF13860 FlgD Ig-like domain CU648_11105 PF00082 Subtilase family CU648_11110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CU648_11110 PF00056 lactate/malate dehydrogenase, NAD binding domain CU648_11210 PF05698 Bacterial trigger factor protein (TF) C-terminus CU648_11210 PF05697 Bacterial trigger factor protein (TF) CU648_11250 PF02308 MgtC family CU648_11255 PF07885 Ion channel CU648_11255 PF02254 TrkA-N domain CU648_11260 PF08868 YugN-like family CU648_11265 PF00342 Phosphoglucose isomerase CU648_11275 PF04070 Domain of unknown function (DUF378) CU648_11280 PF00575 S1 RNA binding domain CU648_11285 PF00155 Aminotransferase class I and II CU648_11290 PF01037 Lrp/AsnC ligand binding domain CU648_11295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CU648_11295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CU648_11300 PF08386 TAP-like protein CU648_11300 PF00561 alpha/beta hydrolase fold CU648_11310 PF00155 Aminotransferase class I and II CU648_11320 PF08810 Kinase associated protein B CU648_11325 PF00929 Exonuclease CU648_11330 PF03600 Citrate transporter CU648_11350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CU648_11350 PF03129 Anticodon binding domain CU648_11355 PF03061 Thioesterase superfamily CU648_11365 PF02632 BioY family CU648_11370 PF00483 Nucleotidyl transferase CU648_11375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CU648_11375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CU648_11375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CU648_11375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CU648_11380 PF02457 DisA bacterial checkpoint controller nucleotide-binding CU648_11380 PF10372 Bacterial membrane-spanning protein N-terminus CU648_11385 PF00883 Cytosol aminopeptidase family, catalytic domain CU648_11385 PF02789 Cytosol aminopeptidase family, N-terminal domain CU648_11390 PF06725 3D domain CU648_11400 PF00293 NUDIX domain CU648_11400 PF13344 Haloacid dehalogenase-like hydrolase CU648_11405 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_11410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_11420 PF06445 GyrI-like small molecule binding domain CU648_11435 PF04463 Protein of unknown function (DUF523) CU648_11455 PF01521 Iron-sulphur cluster biosynthesis CU648_11460 PF01678 Diaminopimelate epimerase CU648_11465 PF07293 Protein of unknown function (DUF1450) CU648_11470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_11480 PF03412 Peptidase C39 family CU648_11480 PF00005 ABC transporter CU648_11480 PF00664 ABC transporter transmembrane region CU648_11485 PF03649 Uncharacterised protein family (UPF0014) CU648_11490 PF03831 PhnA domain CU648_11490 PF08274 PhnA Zinc-Ribbon CU648_11530 PF07315 Protein of unknown function (DUF1462) CU648_11535 PF01106 NifU-like domain CU648_11555 PF04608 Phosphatidylglycerophosphatase A CU648_11565 PF02525 Flavodoxin-like fold CU648_11575 PF13344 Haloacid dehalogenase-like hydrolase CU648_11585 PF01934 Protein of unknown function DUF86 CU648_11590 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CU648_11610 PF06265 Protein of unknown function (DUF1027) CU648_11615 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CU648_11620 PF13411 MerR HTH family regulatory protein CU648_11620 PF07739 TipAS antibiotic-recognition domain CU648_11625 PF10086 YhfC intramembrane metalloprotease CU648_11645 PF04055 Radical SAM superfamily CU648_11645 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CU648_11650 PF01551 Peptidase family M23 CU648_11660 PF08827 Domain of unknown function (DUF1805) CU648_11665 PF02872 5'-nucleotidase, C-terminal domain CU648_11680 PF01458 Uncharacterized protein family (UPF0051) CU648_11685 PF01592 NifU-like N terminal domain CU648_11690 PF00266 Aminotransferase class-V CU648_11695 PF01458 Uncharacterized protein family (UPF0051) CU648_11700 PF00005 ABC transporter CU648_11705 PF03180 NLPA lipoprotein CU648_11710 PF03180 NLPA lipoprotein CU648_11715 PF00528 Binding-protein-dependent transport system inner membrane component CU648_11720 PF09383 NIL domain CU648_11720 PF00005 ABC transporter CU648_11730 PF00085 Thioredoxin CU648_11735 PF01751 Toprim domain CU648_11740 PF01597 Glycine cleavage H-protein CU648_11745 PF03960 ArsC family CU648_11800 PF00056 lactate/malate dehydrogenase, NAD binding domain CU648_11800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CU648_11825 PF08671 Anti-repressor SinI CU648_11825 PF01381 Helix-turn-helix CU648_11830 PF13305 Tetracyclin repressor-like, C-terminal domain CU648_11830 PF00440 Bacterial regulatory proteins, tetR family CU648_11835 PF00753 Metallo-beta-lactamase superfamily CU648_11840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CU648_11840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CU648_11840 PF02770 Acyl-CoA dehydrogenase, middle domain CU648_11850 PF02803 Thiolase, C-terminal domain CU648_11850 PF00108 Thiolase, N-terminal domain CU648_11855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CU648_11855 PF00378 Enoyl-CoA hydratase/isomerase CU648_11855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CU648_11865 PF14115 YuzL-like protein CU648_11870 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_11870 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_11875 PF01619 Proline dehydrogenase CU648_11880 PF10835 Protein of unknown function (DUF2573) CU648_11885 PF01910 Thiamine-binding protein CU648_11890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_11890 PF02743 Cache domain CU648_11890 PF00672 HAMP domain CU648_11905 PF07690 Major Facilitator Superfamily CU648_11910 PF13520 Amino acid permease CU648_11925 PF02096 60Kd inner membrane protein CU648_11935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_11935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_11980 PF09335 SNARE associated Golgi protein CU648_11990 PF17969 L,D-transpeptidase C-terminal domain CU648_11990 PF03734 L,D-transpeptidase catalytic domain CU648_11995 PF00072 Response regulator receiver domain CU648_11995 PF00486 Transcriptional regulatory protein, C terminal CU648_12000 PF00512 His Kinase A (phospho-acceptor) domain CU648_12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_12000 PF16736 Single Cache-like CU648_12000 PF00989 PAS fold CU648_12015 PF09334 tRNA synthetases class I (M) CU648_12015 PF08264 Anticodon-binding domain of tRNA CU648_12025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_12025 PF00672 HAMP domain CU648_12025 PF02743 Cache domain CU648_12030 PF02743 Cache domain CU648_12030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_12030 PF00672 HAMP domain CU648_12035 PF01883 Iron-sulfur cluster assembly protein CU648_12040 PF07504 Fungalysin/Thermolysin Propeptide Motif CU648_12040 PF02868 Thermolysin metallopeptidase, alpha-helical domain CU648_12040 PF03413 Peptidase propeptide and YPEB domain CU648_12040 PF01447 Thermolysin metallopeptidase, catalytic domain CU648_12045 PF17954 Quercetinase C-terminal cupin domain CU648_12045 PF02678 Pirin CU648_12050 PF01047 MarR family CU648_12060 PF00999 Sodium/hydrogen exchanger family CU648_12065 PF02080 TrkA-C domain CU648_12075 PF01235 Sodium:alanine symporter family CU648_12080 PF00210 Ferritin-like domain CU648_12100 PF03641 Possible lysine decarboxylase CU648_12110 PF00210 Ferritin-like domain CU648_12120 PF01773 Na+ dependent nucleoside transporter N-terminus CU648_12120 PF07662 Na+ dependent nucleoside transporter C-terminus CU648_12125 PF07662 Na+ dependent nucleoside transporter C-terminus CU648_12125 PF01773 Na+ dependent nucleoside transporter N-terminus CU648_12130 PF01235 Sodium:alanine symporter family CU648_12135 PF01235 Sodium:alanine symporter family CU648_12140 PF13460 NAD(P)H-binding CU648_12165 PF00248 Aldo/keto reductase family CU648_12170 PF07690 Major Facilitator Superfamily CU648_12175 PF01638 HxlR-like helix-turn-helix CU648_12180 PF07849 Protein of unknown function (DUF1641) CU648_12185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_12190 PF01479 S4 domain CU648_12190 PF00579 tRNA synthetases class I (W and Y) CU648_12195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CU648_12195 PF01565 FAD binding domain CU648_12205 PF17202 Single cache domain 3 CU648_12205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_12205 PF00672 HAMP domain CU648_12215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CU648_12220 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CU648_12235 PF13302 Acetyltransferase (GNAT) domain CU648_12245 PF07690 Major Facilitator Superfamily CU648_12255 PF06146 Phosphate-starvation-inducible E CU648_12275 PF01047 MarR family CU648_12285 PF00005 ABC transporter CU648_12290 PF01032 FecCD transport family CU648_12295 PF01032 FecCD transport family CU648_12305 PF00072 Response regulator receiver domain CU648_12305 PF00486 Transcriptional regulatory protein, C terminal CU648_12325 PF03412 Peptidase C39 family CU648_12325 PF00005 ABC transporter CU648_12325 PF00664 ABC transporter transmembrane region CU648_12355 PF01668 SmpB protein CU648_12365 PF17876 Cold shock domain CU648_12365 PF08206 Ribonuclease B OB domain CU648_12365 PF00773 RNB domain CU648_12365 PF00575 S1 RNA binding domain CU648_12370 PF12146 Serine aminopeptidase, S33 CU648_12375 PF03840 Preprotein translocase SecG subunit CU648_12380 PF04172 LrgB-like family CU648_12385 PF03788 LrgA family CU648_12390 PF01156 Inosine-uridine preferring nucleoside hydrolase CU648_12395 PF03952 Enolase, N-terminal domain CU648_12395 PF00113 Enolase, C-terminal TIM barrel domain CU648_12400 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CU648_12400 PF01676 Metalloenzyme superfamily CU648_12405 PF00121 Triosephosphate isomerase CU648_12410 PF00162 Phosphoglycerate kinase CU648_12415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU648_12415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CU648_12420 PF04198 Putative sugar-binding domain CU648_12430 PF00309 Sigma-54 factor, Activator interacting domain (AID) CU648_12430 PF04963 Sigma-54 factor, core binding domain CU648_12430 PF04552 Sigma-54, DNA binding domain CU648_12450 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CU648_12455 PF07451 Stage V sporulation protein AD (SpoVAD) CU648_12460 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CU648_12470 PF04239 Protein of unknown function (DUF421) CU648_12475 PF00574 Clp protease CU648_12485 PF00381 PTS HPr component phosphorylation site CU648_12490 PF02650 WhiA C-terminal HTH domain CU648_12490 PF14527 WhiA LAGLIDADG-like domain CU648_12490 PF10298 WhiA N-terminal LAGLIDADG-like domain CU648_12495 PF01933 Uncharacterised protein family UPF0052 CU648_12500 PF03668 P-loop ATPase protein family CU648_12505 PF00293 NUDIX domain CU648_12515 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_12525 PF14602 Hexapeptide repeat of succinyl-transferase CU648_12530 PF13419 Haloacid dehalogenase-like hydrolase CU648_12535 PF01790 Prolipoprotein diacylglyceryl transferase CU648_12540 PF02603 HPr Serine kinase N terminus CU648_12540 PF07475 HPr Serine kinase C-terminal domain CU648_12545 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CU648_12555 PF17755 UvrA DNA-binding domain CU648_12555 PF00005 ABC transporter CU648_12555 PF17760 UvrA interaction domain CU648_12560 PF17757 UvrB interaction domain CU648_12560 PF12344 Ultra-violet resistance protein B CU648_12560 PF02151 UvrB/uvrC motif CU648_12560 PF04851 Type III restriction enzyme, res subunit CU648_12560 PF00271 Helicase conserved C-terminal domain CU648_12575 PF13411 MerR HTH family regulatory protein CU648_12575 PF07739 TipAS antibiotic-recognition domain CU648_12610 PF03601 Conserved hypothetical protein 698 CU648_12615 PF03466 LysR substrate binding domain CU648_12615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_12620 PF00376 MerR family regulatory protein CU648_12620 PF09278 MerR, DNA binding CU648_12625 PF03358 NADPH-dependent FMN reductase CU648_12635 PF01906 Putative heavy-metal-binding CU648_12640 PF00664 ABC transporter transmembrane region CU648_12640 PF00005 ABC transporter CU648_12650 PF17820 PDZ domain CU648_12655 PF17820 PDZ domain CU648_12655 PF01471 Putative peptidoglycan binding domain CU648_12655 PF03572 Peptidase family S41 CU648_12660 PF02687 FtsX-like permease family CU648_12660 PF18075 FtsX extracellular domain CU648_12665 PF00005 ABC transporter CU648_12670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CU648_12685 PF01043 SecA preprotein cross-linking domain CU648_12685 PF07517 SecA DEAD-like domain CU648_12685 PF02810 SEC-C motif CU648_12685 PF07516 SecA Wing and Scaffold domain CU648_12690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CU648_12690 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CU648_12695 PF00313 'Cold-shock' DNA-binding domain CU648_12705 PF00271 Helicase conserved C-terminal domain CU648_12705 PF04851 Type III restriction enzyme, res subunit CU648_12710 PF00877 NlpC/P60 family CU648_12710 PF01476 LysM domain CU648_12715 PF01638 HxlR-like helix-turn-helix CU648_12725 PF02645 Uncharacterised protein, DegV family COG1307 CU648_12730 PF09186 Domain of unknown function (DUF1949) CU648_12730 PF01205 Uncharacterized protein family UPF0029 CU648_12735 PF03816 Cell envelope-related transcriptional attenuator domain CU648_12740 PF02350 UDP-N-acetylglucosamine 2-epimerase CU648_12745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CU648_12745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CU648_12745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CU648_12750 PF00953 Glycosyl transferase family 4 CU648_12760 PF00874 PRD domain CU648_12760 PF03610 PTS system fructose IIA component CU648_12760 PF00158 Sigma-54 interaction domain CU648_12770 PF02417 Chromate transporter CU648_12780 PF02899 Phage integrase, N-terminal SAM-like domain CU648_12780 PF00589 Phage integrase family CU648_12785 PF00589 Phage integrase family CU648_12785 PF02899 Phage integrase, N-terminal SAM-like domain CU648_12790 PF04794 YdjC-like protein CU648_12795 PF02056 Family 4 glycosyl hydrolase CU648_12795 PF11975 Family 4 glycosyl hydrolase C-terminal domain CU648_12800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CU648_12805 PF02378 Phosphotransferase system, EIIC CU648_12810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CU648_12820 PF02675 S-adenosylmethionine decarboxylase CU648_12825 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CU648_12830 PF02378 Phosphotransferase system, EIIC CU648_12835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CU648_12840 PF00375 Sodium:dicarboxylate symporter family CU648_12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_12880 PF03466 LysR substrate binding domain CU648_12900 PF01654 Cytochrome bd terminal oxidase subunit I CU648_12905 PF02322 Cytochrome bd terminal oxidase subunit II CU648_12910 PF02040 Arsenical pump membrane protein CU648_12915 PF13667 ThiC-associated domain CU648_12915 PF01964 Radical SAM ThiC family CU648_12945 PF02652 L-lactate permease CU648_12955 PF09988 Uncharacterized metal-binding protein (DUF2227) CU648_12970 PF00884 Sulfatase CU648_12980 PF01063 Amino-transferase class IV CU648_12985 PF01476 LysM domain CU648_12985 PF00877 NlpC/P60 family CU648_12990 PF07662 Na+ dependent nucleoside transporter C-terminus CU648_12990 PF01773 Na+ dependent nucleoside transporter N-terminus CU648_13010 PF02028 BCCT, betaine/carnitine/choline family transporter CU648_13020 PF01476 LysM domain CU648_13020 PF06725 3D domain CU648_13045 PF04434 SWIM zinc finger CU648_13050 PF00176 SNF2 family N-terminal domain CU648_13050 PF00271 Helicase conserved C-terminal domain CU648_13050 PF12419 SNF2 Helicase protein CU648_13080 PF04545 Sigma-70, region 4 CU648_13080 PF04542 Sigma-70 region 2 CU648_13085 PF04893 Yip1 domain CU648_13090 PF04893 Yip1 domain CU648_13095 PF12704 MacB-like periplasmic core domain CU648_13095 PF02687 FtsX-like permease family CU648_13100 PF00005 ABC transporter CU648_13110 PF07690 Major Facilitator Superfamily CU648_13125 PF16736 Single Cache-like CU648_13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_13125 PF00989 PAS fold CU648_13125 PF00512 His Kinase A (phospho-acceptor) domain CU648_13130 PF00486 Transcriptional regulatory protein, C terminal CU648_13130 PF00072 Response regulator receiver domain CU648_13135 PF16363 GDP-mannose 4,6 dehydratase CU648_13150 PF01370 NAD dependent epimerase/dehydratase family CU648_13155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CU648_13155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CU648_13155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CU648_13165 PF00535 Glycosyl transferase family 2 CU648_13170 PF00534 Glycosyl transferases group 1 CU648_13185 PF00534 Glycosyl transferases group 1 CU648_13185 PF13439 Glycosyltransferase Family 4 CU648_13190 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_13195 PF02397 Bacterial sugar transferase CU648_13200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CU648_13205 PF02719 Polysaccharide biosynthesis protein CU648_13210 PF00483 Nucleotidyl transferase CU648_13220 PF13614 AAA domain CU648_13225 PF02706 Chain length determinant protein CU648_13225 PF13807 G-rich domain on putative tyrosine kinase CU648_13230 PF13614 AAA domain CU648_13235 PF07977 FabA-like domain CU648_13245 PF12116 Stage III sporulation protein D CU648_13255 PF01551 Peptidase family M23 CU648_13265 PF00005 ABC transporter CU648_13270 PF00072 Response regulator receiver domain CU648_13270 PF04397 LytTr DNA-binding domain CU648_13275 PF08486 Stage II sporulation protein CU648_13280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CU648_13290 PF06612 Protein of unknown function (DUF1146) CU648_13295 PF00361 Proton-conducting membrane transporter CU648_13300 PF00361 Proton-conducting membrane transporter CU648_13305 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CU648_13305 PF00361 Proton-conducting membrane transporter CU648_13305 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CU648_13310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CU648_13315 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CU648_13325 PF00146 NADH dehydrogenase CU648_13330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CU648_13335 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CU648_13340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CU648_13345 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CU648_13350 PF03707 Bacterial signalling protein N terminal repeat CU648_13350 PF00563 EAL domain CU648_13350 PF00990 Diguanylate cyclase, GGDEF domain CU648_13365 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CU648_13365 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CU648_13370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CU648_13370 PF02874 ATP synthase alpha/beta family, beta-barrel domain CU648_13375 PF00231 ATP synthase CU648_13385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CU648_13385 PF02874 ATP synthase alpha/beta family, beta-barrel domain CU648_13385 PF00306 ATP synthase alpha/beta chain, C terminal domain CU648_13390 PF00213 ATP synthase delta (OSCP) subunit CU648_13395 PF00430 ATP synthase B/B' CF(0) CU648_13400 PF00137 ATP synthase subunit C CU648_13405 PF00119 ATP synthase A chain CU648_13410 PF03899 ATP synthase I chain CU648_13430 PF00464 Serine hydroxymethyltransferase CU648_13435 PF04260 Protein of unknown function (DUF436) CU648_13440 PF02502 Ribose/Galactose Isomerase CU648_13445 PF01451 Low molecular weight phosphotyrosine protein phosphatase CU648_13455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CU648_13460 PF07681 DoxX CU648_13465 PF01613 Flavin reductase like domain CU648_13480 PF02659 Putative manganese efflux pump CU648_13485 PF01300 Telomere recombination CU648_13485 PF03481 Putative GTP-binding controlling metal-binding CU648_13495 PF09551 Stage II sporulation protein R (spore_II_R) CU648_13500 PF17827 PrmC N-terminal domain CU648_13500 PF13847 Methyltransferase domain CU648_13505 PF00472 RF-1 domain CU648_13505 PF03462 PCRF domain CU648_13510 PF00265 Thymidine kinase CU648_13515 PF01197 Ribosomal protein L31 CU648_13520 PF07497 Rho termination factor, RNA-binding domain CU648_13520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CU648_13520 PF07498 Rho termination factor, N-terminal domain CU648_13525 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CU648_13535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CU648_13540 PF01116 Fructose-bisphosphate aldolase class-II CU648_13545 PF00072 Response regulator receiver domain CU648_13550 PF10740 Domain of unknown function (DUF2529) CU648_13555 PF00117 Glutamine amidotransferase class-I CU648_13555 PF06418 CTP synthase N-terminus CU648_13560 PF05066 HB1, ASXL, restriction endonuclease HTH domain CU648_13570 PF02770 Acyl-CoA dehydrogenase, middle domain CU648_13570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CU648_13570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CU648_13575 PF02770 Acyl-CoA dehydrogenase, middle domain CU648_13575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CU648_13575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CU648_13580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CU648_13580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CU648_13585 PF00108 Thiolase, N-terminal domain CU648_13585 PF02803 Thiolase, C-terminal domain CU648_13590 PF13183 4Fe-4S dicluster domain CU648_13590 PF02754 Cysteine-rich domain CU648_13595 PF13091 PLD-like domain CU648_13600 PF03851 UV-endonuclease UvdE CU648_13605 PF00563 EAL domain CU648_13605 PF00990 Diguanylate cyclase, GGDEF domain CU648_13605 PF03707 Bacterial signalling protein N terminal repeat CU648_13625 PF00072 Response regulator receiver domain CU648_13625 PF00196 Bacterial regulatory proteins, luxR family CU648_13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_13630 PF07730 Histidine kinase CU648_13640 PF00005 ABC transporter CU648_13645 PF00557 Metallopeptidase family M24 CU648_13660 PF04389 Peptidase family M28 CU648_13660 PF02225 PA domain CU648_13680 PF04542 Sigma-70 region 2 CU648_13680 PF08281 Sigma-70, region 4 CU648_13685 PF00750 tRNA synthetases class I (R) CU648_13685 PF05746 DALR anticodon binding domain CU648_13685 PF03485 Arginyl tRNA synthetase N terminal domain CU648_13690 PF09148 Domain of unknown function (DUF1934) CU648_13695 PF02016 LD-carboxypeptidase N-terminal domain CU648_13695 PF17676 LD-carboxypeptidase C-terminal domain CU648_13710 PF00491 Arginase family CU648_13715 PF17284 Spermidine synthase tetramerisation domain CU648_13720 PF07690 Major Facilitator Superfamily CU648_13725 PF13411 MerR HTH family regulatory protein CU648_13730 PF03009 Glycerophosphoryl diester phosphodiesterase family CU648_13735 PF00905 Penicillin binding protein transpeptidase domain CU648_13735 PF00912 Transglycosylase CU648_13740 PF08741 YwhD family CU648_13745 PF02163 Peptidase family M50 CU648_13750 PF01361 Tautomerase enzyme CU648_13755 PF01966 HD domain CU648_13760 PF01497 Periplasmic binding protein CU648_13765 PF00005 ABC transporter CU648_13770 PF01032 FecCD transport family CU648_13775 PF01032 FecCD transport family CU648_13780 PF07293 Protein of unknown function (DUF1450) CU648_13795 PF03099 Biotin/lipoate A/B protein ligase family CU648_13800 PF01515 Phosphate acetyl/butaryl transferase CU648_13810 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_13810 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_13815 PF07486 Cell Wall Hydrolase CU648_13820 PF09671 Spore coat protein (Spore_GerQ) CU648_13825 PF04241 Protein of unknown function (DUF423) CU648_13835 PF02254 TrkA-N domain CU648_13835 PF07885 Ion channel CU648_13840 PF00860 Permease family CU648_13850 PF12823 Domain of unknown function (DUF3817) CU648_13875 PF01381 Helix-turn-helix CU648_13880 PF00085 Thioredoxin CU648_13885 PF03167 Uracil DNA glycosylase superfamily CU648_13890 PF12679 ABC-2 family transporter protein CU648_13895 PF00005 ABC transporter CU648_13900 PF13472 GDSL-like Lipase/Acylhydrolase family CU648_13905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CU648_13905 PF00356 Bacterial regulatory proteins, lacI family CU648_13915 PF03447 Homoserine dehydrogenase, NAD binding domain CU648_13915 PF01842 ACT domain CU648_13915 PF00742 Homoserine dehydrogenase CU648_13920 PF04204 Homoserine O-succinyltransferase CU648_13925 PF01053 Cys/Met metabolism PLP-dependent enzyme CU648_13935 PF13419 Haloacid dehalogenase-like hydrolase CU648_13940 PF00027 Cyclic nucleotide-binding domain CU648_13945 PF02525 Flavodoxin-like fold CU648_13950 PF00072 Response regulator receiver domain CU648_13950 PF00196 Bacterial regulatory proteins, luxR family CU648_13955 PF13185 GAF domain CU648_13955 PF07730 Histidine kinase CU648_13960 PF08543 Phosphomethylpyrimidine kinase CU648_13965 PF07694 5TMR of 5TMR-LYT CU648_13965 PF00990 Diguanylate cyclase, GGDEF domain CU648_13970 PF04328 Selenoprotein, putative CU648_13975 PF13722 5TM C-terminal transporter carbon starvation CstA CU648_13975 PF02554 Carbon starvation protein CstA CU648_13980 PF04397 LytTr DNA-binding domain CU648_13980 PF00072 Response regulator receiver domain CU648_13985 PF07690 Major Facilitator Superfamily CU648_13990 PF03808 Glycosyl transferase WecB/TagA/CpsF family CU648_14005 PF03458 UPF0126 domain CU648_14010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_14020 PF03061 Thioesterase superfamily CU648_14030 PF00535 Glycosyl transferase family 2 CU648_14035 PF00005 ABC transporter CU648_14035 PF12848 ABC transporter CU648_14055 PF00535 Glycosyl transferase family 2 CU648_14060 PF00440 Bacterial regulatory proteins, tetR family CU648_14065 PF00873 AcrB/AcrD/AcrF family CU648_14070 PF01641 SelR domain CU648_14070 PF01625 Peptide methionine sulfoxide reductase CU648_14075 PF01594 AI-2E family transporter CU648_14080 PF04172 LrgB-like family CU648_14085 PF03788 LrgA family CU648_14090 PF00072 Response regulator receiver domain CU648_14090 PF04397 LytTr DNA-binding domain CU648_14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_14095 PF07694 5TMR of 5TMR-LYT CU648_14095 PF13492 GAF domain CU648_14095 PF06580 Histidine kinase CU648_14100 PF07690 Major Facilitator Superfamily CU648_14105 PF02028 BCCT, betaine/carnitine/choline family transporter CU648_14110 PF02898 Nitric oxide synthase, oxygenase domain CU648_14120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CU648_14120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CU648_14130 PF02293 AmiS/UreI family transporter CU648_14140 PF16363 GDP-mannose 4,6 dehydratase CU648_14145 PF03006 Haemolysin-III related CU648_14155 PF00271 Helicase conserved C-terminal domain CU648_14155 PF00270 DEAD/DEAH box helicase CU648_14155 PF03880 DbpA RNA binding domain CU648_14165 PF00478 IMP dehydrogenase / GMP reductase domain CU648_14170 PF08439 Oligopeptidase F CU648_14170 PF01432 Peptidase family M3 CU648_14180 PF02590 Predicted SPOUT methyltransferase CU648_14190 PF13180 PDZ domain CU648_14195 PF00753 Metallo-beta-lactamase superfamily CU648_14200 PF09648 YycH protein CU648_14205 PF07435 YycH protein CU648_14210 PF00672 HAMP domain CU648_14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_14210 PF00512 His Kinase A (phospho-acceptor) domain CU648_14210 PF13426 PAS domain CU648_14215 PF00072 Response regulator receiver domain CU648_14215 PF00486 Transcriptional regulatory protein, C terminal CU648_14240 PF00709 Adenylosuccinate synthetase CU648_14245 PF03796 DnaB-like helicase C terminal domain CU648_14245 PF00772 DnaB-like helicase N terminal domain CU648_14250 PF01281 Ribosomal protein L9, N-terminal domain CU648_14250 PF03948 Ribosomal protein L9, C-terminal domain CU648_14255 PF02272 DHHA1 domain CU648_14255 PF01368 DHH family CU648_14260 PF09991 Predicted membrane protein (DUF2232) CU648_14265 PF01084 Ribosomal protein S18 CU648_14270 PF00436 Single-strand binding protein family CU648_14275 PF01250 Ribosomal protein S6 CU648_14280 PF06071 Protein of unknown function (DUF933) CU648_14280 PF01926 50S ribosome-binding GTPase CU648_14285 PF06107 Bacterial protein of unknown function (DUF951) CU648_14290 PF00924 Mechanosensitive ion channel CU648_14295 PF06866 Protein of unknown function (DUF1256) CU648_14300 PF17762 HTH domain found in ParB protein CU648_14300 PF02195 ParB-like nuclease domain CU648_14305 PF13614 AAA domain CU648_14310 PF17762 HTH domain found in ParB protein CU648_14310 PF02195 ParB-like nuclease domain CU648_14315 PF02527 rRNA small subunit methyltransferase G CU648_14320 PF13932 GidA associated domain CU648_14320 PF01134 Glucose inhibited division protein A CU648_14325 PF10396 GTP-binding protein TrmE N-terminus CU648_14325 PF12631 MnmE helical domain CU648_14325 PF01926 50S ribosome-binding GTPase CU648_14330 PF14804 Jag N-terminus CU648_14330 PF01424 R3H domain CU648_14335 PF02096 60Kd inner membrane protein CU648_14340 PF00825 Ribonuclease P CU648_14345 PF00468 Ribosomal protein L34 CU648_14350 PF00308 Bacterial dnaA protein CU648_14350 PF08299 Bacterial dnaA protein helix-turn-helix CU648_14350 PF11638 DnaA N-terminal domain CU648_14355 PF02768 DNA polymerase III beta subunit, C-terminal domain CU648_14355 PF02767 DNA polymerase III beta subunit, central domain CU648_14355 PF00712 DNA polymerase III beta subunit, N-terminal domain CU648_14365 PF02463 RecF/RecN/SMC N terminal domain CU648_14370 PF01751 Toprim domain CU648_14370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_14370 PF00204 DNA gyrase B CU648_14370 PF00986 DNA gyrase B subunit, carboxyl terminus CU648_14375 PF03989 DNA gyrase C-terminal domain, beta-propeller CU648_14375 PF00521 DNA gyrase/topoisomerase IV, subunit A CU648_14405 PF14175 YaaC-like Protein CU648_14410 PF00478 IMP dehydrogenase / GMP reductase domain CU648_14410 PF00571 CBS domain CU648_14415 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_14415 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_14420 PF01680 SOR/SNZ family CU648_14425 PF01174 SNO glutamine amidotransferase family CU648_14430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CU648_14430 PF02403 Seryl-tRNA synthetase N-terminal domain CU648_14445 PF01712 Deoxynucleoside kinase CU648_14450 PF01712 Deoxynucleoside kinase CU648_14455 PF00857 Isochorismatase family CU648_14465 PF14437 MafB19-like deaminase CU648_14475 PF12169 DNA polymerase III subunits gamma and tau domain III CU648_14480 PF02575 YbaB/EbfC DNA-binding family CU648_14485 PF13662 Toprim domain CU648_14485 PF02132 RecR protein CU648_14490 PF10704 Protein of unknown function (DUF2508) CU648_14495 PF07441 SigmaK-factor processing regulatory protein BofA CU648_14530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CU648_14530 PF01276 Orn/Lys/Arg decarboxylase, major domain CU648_14535 PF02223 Thymidylate kinase CU648_14540 PF09115 DNA polymerase III, delta subunit, C terminal CU648_14545 PF04468 PSP1 C-terminal conserved region CU648_14550 PF06156 Initiation control protein YabA CU648_14555 PF05175 Methyltransferase small domain CU648_14560 PF01541 GIY-YIG catalytic domain CU648_14565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CU648_14570 PF18277 AbrB C-terminal domain CU648_14570 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CU648_14575 PF01588 Putative tRNA binding domain CU648_14575 PF08264 Anticodon-binding domain of tRNA CU648_14575 PF09334 tRNA synthetases class I (M) CU648_14580 PF01026 TatD related DNase CU648_14585 PF13331 Domain of unknown function (DUF4093) CU648_14585 PF13662 Toprim domain CU648_14590 PF00398 Ribosomal RNA adenine dimethylase CU648_14595 PF05582 YabG peptidase U57 CU648_14600 PF06257 Biofilm formation stimulator VEG CU648_14605 PF00269 Small, acid-soluble spore proteins, alpha/beta type CU648_14610 PF08544 GHMP kinases C terminal CU648_14610 PF00288 GHMP kinases N terminal domain CU648_14615 PF00156 Phosphoribosyl transferase domain CU648_14615 PF09182 Bacterial purine repressor, N-terminal CU648_14625 PF01042 Endoribonuclease L-PSP CU648_14630 PF04026 SpoVG CU648_14635 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_14635 PF00483 Nucleotidyl transferase CU648_14640 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CU648_14640 PF14572 Phosphoribosyl synthetase-associated domain CU648_14645 PF01195 Peptidyl-tRNA hydrolase CU648_14655 PF03461 TRCF domain CU648_14655 PF00270 DEAD/DEAH box helicase CU648_14655 PF17757 UvrB interaction domain CU648_14655 PF02559 CarD-like/TRCF domain CU648_14655 PF00271 Helicase conserved C-terminal domain CU648_14660 PF15714 Stage V sporulation protein T C-terminal, transcription factor CU648_14660 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CU648_14665 PF14667 Polysaccharide biosynthesis C-terminal domain CU648_14665 PF01943 Polysaccharide biosynthesis protein CU648_14670 PF03819 MazG nucleotide pyrophosphohydrolase domain CU648_14670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CU648_14675 PF01479 S4 domain CU648_14680 PF07873 YabP family CU648_14685 PF09578 Spore cortex protein YabQ (Spore_YabQ) CU648_14695 PF00575 S1 RNA binding domain CU648_14710 PF07228 Stage II sporulation protein E (SpoIIE) CU648_14715 PF09179 TilS substrate binding domain CU648_14715 PF11734 TilS substrate C-terminal domain CU648_14715 PF01171 PP-loop family CU648_14725 PF06480 FtsH Extracellular CU648_14725 PF17862 AAA+ lid domain CU648_14725 PF01434 Peptidase family M41 CU648_14725 PF00004 ATPase family associated with various cellular activities (AAA) CU648_14730 PF03309 Type III pantothenate kinase CU648_14735 PF01430 Hsp33 protein CU648_14740 PF00291 Pyridoxal-phosphate dependent enzyme CU648_14745 PF00425 chorismate binding enzyme CU648_14745 PF04715 Anthranilate synthase component I, N terminal region CU648_14750 PF00117 Glutamine amidotransferase class-I CU648_14755 PF01063 Amino-transferase class IV CU648_14760 PF00809 Pterin binding enzyme CU648_14765 PF02152 Dihydroneopterin aldolase CU648_14770 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CU648_14775 PF01381 Helix-turn-helix CU648_14780 PF01207 Dihydrouridine synthase (Dus) CU648_14785 PF00152 tRNA synthetases class II (D, K and N) CU648_14785 PF01336 OB-fold nucleic acid binding domain CU648_14865 PF05848 CtsR N-terminal HTH domain CU648_14865 PF17727 CtsR C-terminal dimerization domain CU648_14870 PF02151 UvrB/uvrC motif CU648_14875 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CU648_14880 PF02861 Clp amino terminal domain, pathogenicity island component CU648_14880 PF00004 ATPase family associated with various cellular activities (AAA) CU648_14880 PF10431 C-terminal, D2-small domain, of ClpB protein CU648_14880 PF17871 AAA lid domain CU648_14880 PF07724 AAA domain (Cdc48 subfamily) CU648_14885 PF18073 Rubredoxin metal binding domain CU648_14890 PF10635 DisA bacterial checkpoint controller linker region CU648_14890 PF02457 DisA bacterial checkpoint controller nucleotide-binding CU648_14900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CU648_14905 PF02542 YgbB family CU648_14910 PF00749 tRNA synthetases class I (E and Q), catalytic domain CU648_14915 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_14915 PF06426 Serine acetyltransferase, N-terminal CU648_14920 PF01406 tRNA synthetases class I (C) catalytic domain CU648_14920 PF09190 DALR domain CU648_14925 PF00636 Ribonuclease III domain CU648_14930 PF00588 SpoU rRNA Methylase family CU648_14930 PF08032 RNA 2'-O ribose methyltransferase substrate binding CU648_14935 PF05991 YacP-like NYN domain CU648_14940 PF08281 Sigma-70, region 4 CU648_14940 PF04542 Sigma-70 region 2 CU648_14945 PF00471 Ribosomal protein L33 CU648_14950 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CU648_14955 PF02357 Transcription termination factor nusG CU648_14955 PF00467 KOW motif CU648_14960 PF03946 Ribosomal protein L11, N-terminal domain CU648_14960 PF00298 Ribosomal protein L11, RNA binding domain CU648_14965 PF00687 Ribosomal protein L1p/L10e family CU648_14970 PF00466 Ribosomal protein L10 CU648_14975 PF16320 Ribosomal protein L7/L12 dimerisation domain CU648_14975 PF00542 Ribosomal protein L7/L12 C-terminal domain CU648_14980 PF05175 Methyltransferase small domain CU648_14985 PF04563 RNA polymerase beta subunit CU648_14985 PF04561 RNA polymerase Rpb2, domain 2 CU648_14985 PF04565 RNA polymerase Rpb2, domain 3 CU648_14985 PF10385 RNA polymerase beta subunit external 1 domain CU648_14985 PF00562 RNA polymerase Rpb2, domain 6 CU648_14985 PF04560 RNA polymerase Rpb2, domain 7 CU648_14990 PF04983 RNA polymerase Rpb1, domain 3 CU648_14990 PF00623 RNA polymerase Rpb1, domain 2 CU648_14990 PF04997 RNA polymerase Rpb1, domain 1 CU648_14990 PF05000 RNA polymerase Rpb1, domain 4 CU648_14990 PF04998 RNA polymerase Rpb1, domain 5 CU648_14995 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CU648_15000 PF00164 Ribosomal protein S12/S23 CU648_15005 PF00177 Ribosomal protein S7p/S5e CU648_15010 PF00009 Elongation factor Tu GTP binding domain CU648_15010 PF00679 Elongation factor G C-terminus CU648_15010 PF14492 Elongation Factor G, domain II CU648_15010 PF03764 Elongation factor G, domain IV CU648_15010 PF03144 Elongation factor Tu domain 2 CU648_15015 PF03143 Elongation factor Tu C-terminal domain CU648_15015 PF03144 Elongation factor Tu domain 2 CU648_15015 PF00009 Elongation factor Tu GTP binding domain CU648_15020 PF00338 Ribosomal protein S10p/S20e CU648_15025 PF00297 Ribosomal protein L3 CU648_15030 PF00573 Ribosomal protein L4/L1 family CU648_15035 PF00276 Ribosomal protein L23 CU648_15040 PF00181 Ribosomal Proteins L2, RNA binding domain CU648_15040 PF03947 Ribosomal Proteins L2, C-terminal domain CU648_15045 PF00203 Ribosomal protein S19 CU648_15050 PF00237 Ribosomal protein L22p/L17e CU648_15055 PF00189 Ribosomal protein S3, C-terminal domain CU648_15055 PF07650 KH domain CU648_15060 PF00252 Ribosomal protein L16p/L10e CU648_15065 PF00831 Ribosomal L29 protein CU648_15070 PF00366 Ribosomal protein S17 CU648_15075 PF00238 Ribosomal protein L14p/L23e CU648_15080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CU648_15080 PF00467 KOW motif CU648_15085 PF00673 ribosomal L5P family C-terminus CU648_15085 PF00281 Ribosomal protein L5 CU648_15090 PF00253 Ribosomal protein S14p/S29e CU648_15095 PF00410 Ribosomal protein S8 CU648_15100 PF00347 Ribosomal protein L6 CU648_15105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CU648_15110 PF00333 Ribosomal protein S5, N-terminal domain CU648_15110 PF03719 Ribosomal protein S5, C-terminal domain CU648_15115 PF00327 Ribosomal protein L30p/L7e CU648_15120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CU648_15125 PF00344 SecY translocase CU648_15130 PF05191 Adenylate kinase, active site lid CU648_15135 PF00557 Metallopeptidase family M24 CU648_15140 PF01176 Translation initiation factor 1A / IF-1 CU648_15145 PF00444 Ribosomal protein L36 CU648_15150 PF00416 Ribosomal protein S13/S18 CU648_15155 PF00411 Ribosomal protein S11 CU648_15160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CU648_15160 PF01000 RNA polymerase Rpb3/RpoA insert domain CU648_15160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CU648_15165 PF01196 Ribosomal protein L17 CU648_15170 PF00005 ABC transporter CU648_15175 PF00005 ABC transporter CU648_15180 PF02361 Cobalt transport protein CU648_15185 PF01416 tRNA pseudouridine synthase CU648_15190 PF00572 Ribosomal protein L13 CU648_15195 PF00380 Ribosomal protein S9/S16 CU648_15205 PF01520 N-acetylmuramoyl-L-alanine amidase CU648_15210 PF10609 NUBPL iron-transfer P-loop NTPase CU648_15215 PF17898 Spore germination GerD central core domain CU648_15220 PF14089 KinB-signalling pathway activation in sporulation CU648_15225 PF01522 Polysaccharide deacetylase CU648_15295 PF02595 Glycerate kinase family CU648_15300 PF00491 Arginase family CU648_15305 PF02457 DisA bacterial checkpoint controller nucleotide-binding CU648_15310 PF07949 YbbR-like protein CU648_15315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CU648_15315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CU648_15315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CU648_15315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CU648_15325 PF01380 SIS domain CU648_15345 PF00392 Bacterial regulatory proteins, gntR family CU648_15345 PF07729 FCD domain CU648_15350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CU648_15350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CU648_15355 PF02447 GntP family permease CU648_15360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CU648_15360 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CU648_15390 PF00528 Binding-protein-dependent transport system inner membrane component CU648_15395 PF09383 NIL domain CU648_15395 PF00005 ABC transporter CU648_15400 PF03180 NLPA lipoprotein CU648_15415 PF01565 FAD binding domain CU648_15420 PF07690 Major Facilitator Superfamily CU648_15430 PF07690 Major Facilitator Superfamily CU648_15445 PF00528 Binding-protein-dependent transport system inner membrane component CU648_15450 PF00528 Binding-protein-dependent transport system inner membrane component CU648_15450 PF12911 N-terminal TM domain of oligopeptide transport permease C CU648_15455 PF00005 ABC transporter CU648_15455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_15460 PF00005 ABC transporter CU648_15460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_15465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_15475 PF12833 Helix-turn-helix domain CU648_15485 PF00440 Bacterial regulatory proteins, tetR family CU648_15495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_15500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_15505 PF00248 Aldo/keto reductase family CU648_15510 PF14748 Pyrroline-5-carboxylate reductase dimerisation CU648_15510 PF03807 NADP oxidoreductase coenzyme F420-dependent CU648_15520 PF04973 Nicotinamide mononucleotide transporter CU648_15525 PF06800 Sugar transport protein CU648_15530 PF01609 Transposase DDE domain CU648_15535 PF00528 Binding-protein-dependent transport system inner membrane component CU648_15545 PF12728 Helix-turn-helix domain CU648_15545 PF12727 PBP superfamily domain CU648_15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_15560 PF03466 LysR substrate binding domain CU648_15565 PF00892 EamA-like transporter family CU648_15570 PF14142 YrzO-like protein CU648_15580 PF01553 Acyltransferase CU648_15595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CU648_15595 PF00356 Bacterial regulatory proteins, lacI family CU648_15605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_15605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_15630 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CU648_15655 PF00005 ABC transporter CU648_15655 PF16326 ABC transporter C-terminal domain CU648_15655 PF12848 ABC transporter CU648_15665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_15670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_15675 PF00528 Binding-protein-dependent transport system inner membrane component CU648_15685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_15685 PF00005 ABC transporter CU648_15690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_15690 PF00005 ABC transporter CU648_15730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_15735 PF01557 Fumarylacetoacetate (FAA) hydrolase family CU648_15750 PF13520 Amino acid permease CU648_15755 PF07690 Major Facilitator Superfamily CU648_15760 PF07478 D-ala D-ala ligase C-terminus CU648_15760 PF01820 D-ala D-ala ligase N-terminus CU648_15765 PF08245 Mur ligase middle domain CU648_15765 PF01225 Mur ligase family, catalytic domain CU648_15765 PF02875 Mur ligase family, glutamate ligase domain CU648_15770 PF00270 DEAD/DEAH box helicase CU648_15770 PF00271 Helicase conserved C-terminal domain CU648_15775 PF03851 UV-endonuclease UvdE CU648_15780 PF01694 Rhomboid family CU648_15785 PF01648 4'-phosphopantetheinyl transferase superfamily CU648_15795 PF01168 Alanine racemase, N-terminal domain CU648_15795 PF00842 Alanine racemase, C-terminal domain CU648_15800 PF01402 Ribbon-helix-helix protein, copG family CU648_15805 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CU648_15810 PF16921 Tex protein YqgF-like domain CU648_15810 PF09371 Tex-like protein N-terminal domain CU648_15810 PF00575 S1 RNA binding domain CU648_15810 PF17674 HHH domain CU648_15820 PF10263 SprT-like family CU648_15820 PF17283 SprT-like zinc ribbon domain CU648_15905 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CU648_15910 PF00814 Glycoprotease family CU648_15915 PF00583 Acetyltransferase (GNAT) family CU648_15920 PF00814 Glycoprotease family CU648_15925 PF00005 ABC transporter CU648_15925 PF12848 ABC transporter CU648_15925 PF16326 ABC transporter C-terminal domain CU648_15930 PF02629 CoA binding domain CU648_15930 PF06971 Putative DNA-binding protein N-terminus CU648_15940 PF02517 CPBP intramembrane metalloprotease CU648_15945 PF00166 Chaperonin 10 Kd subunit CU648_15950 PF00118 TCP-1/cpn60 chaperonin family CU648_15955 PF13614 AAA domain CU648_15970 PF02540 NAD synthase CU648_15970 PF00117 Glutamine amidotransferase class-I CU648_15970 PF00958 GMP synthase C terminal domain CU648_15975 PF00860 Permease family CU648_15980 PF00072 Response regulator receiver domain CU648_15980 PF00486 Transcriptional regulatory protein, C terminal CU648_15985 PF00512 His Kinase A (phospho-acceptor) domain CU648_15985 PF16736 Single Cache-like CU648_15985 PF00989 PAS fold CU648_15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_16010 PF01323 DSBA-like thioredoxin domain CU648_16035 PF02673 Bacitracin resistance protein BacA CU648_16045 PF00005 ABC transporter CU648_16050 PF00512 His Kinase A (phospho-acceptor) domain CU648_16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_16055 PF00486 Transcriptional regulatory protein, C terminal CU648_16055 PF00072 Response regulator receiver domain CU648_16075 PF00892 EamA-like transporter family CU648_16105 PF00731 AIR carboxylase CU648_16110 PF02222 ATP-grasp domain CU648_16110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CU648_16115 PF00206 Lyase CU648_16115 PF10397 Adenylosuccinate lyase C-terminus CU648_16120 PF01259 SAICAR synthetase CU648_16125 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CU648_16135 PF00586 AIR synthase related protein, N-terminal domain CU648_16135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CU648_16135 PF02769 AIR synthase related protein, C-terminal domain CU648_16140 PF00156 Phosphoribosyl transferase domain CU648_16145 PF00586 AIR synthase related protein, N-terminal domain CU648_16145 PF02769 AIR synthase related protein, C-terminal domain CU648_16150 PF00551 Formyl transferase CU648_16155 PF02142 MGS-like domain CU648_16155 PF01808 AICARFT/IMPCHase bienzyme CU648_16160 PF02844 Phosphoribosylglycinamide synthetase, N domain CU648_16160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CU648_16160 PF02843 Phosphoribosylglycinamide synthetase, C domain CU648_16185 PF01884 PcrB family CU648_16190 PF13361 UvrD-like helicase C-terminal domain CU648_16190 PF00580 UvrD/REP helicase N-terminal domain CU648_16195 PF03120 NAD-dependent DNA ligase OB-fold domain CU648_16195 PF01653 NAD-dependent DNA ligase adenylation domain CU648_16195 PF12826 Helix-hairpin-helix motif CU648_16195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CU648_16195 PF00533 BRCA1 C Terminus (BRCT) domain CU648_16200 PF07537 CamS sex pheromone cAM373 precursor CU648_16205 PF01925 Sulfite exporter TauE/SafE CU648_16210 PF00171 Aldehyde dehydrogenase family CU648_16220 PF00857 Isochorismatase family CU648_16230 PF09383 NIL domain CU648_16230 PF00005 ABC transporter CU648_16235 PF00528 Binding-protein-dependent transport system inner membrane component CU648_16240 PF03180 NLPA lipoprotein CU648_16255 PF02374 Anion-transporting ATPase CU648_16255 PF17886 HSP20-like domain found in ArsA CU648_16260 PF01047 MarR family CU648_16265 PF05360 yiaA/B two helix domain CU648_16270 PF02686 Glu-tRNAGln amidotransferase C subunit CU648_16275 PF01425 Amidase CU648_16280 PF02934 GatB/GatE catalytic domain CU648_16280 PF02637 GatB domain CU648_16285 PF00781 Diacylglycerol kinase catalytic domain CU648_16290 PF13419 Haloacid dehalogenase-like hydrolase CU648_16295 PF00202 Aminotransferase class-III CU648_16300 PF00158 Sigma-54 interaction domain CU648_16305 PF00171 Aldehyde dehydrogenase family CU648_16310 PF00893 Small Multidrug Resistance protein CU648_16315 PF02073 Thermophilic metalloprotease (M29) CU648_16330 PF07662 Na+ dependent nucleoside transporter C-terminus CU648_16330 PF07670 Nucleoside recognition CU648_16330 PF01773 Na+ dependent nucleoside transporter N-terminus CU648_16335 PF02475 Met-10+ like-protein CU648_16335 PF05958 tRNA (Uracil-5-)-methyltransferase CU648_16335 PF01938 TRAM domain CU648_16340 PF01207 Dihydrouridine synthase (Dus) CU648_16345 PF13188 PAS domain CU648_16345 PF00989 PAS fold CU648_16345 PF13426 PAS domain CU648_16345 PF00512 His Kinase A (phospho-acceptor) domain CU648_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_16350 PF07308 Protein of unknown function (DUF1456) CU648_16365 PF13378 Enolase C-terminal domain-like CU648_16365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CU648_16380 PF07687 Peptidase dimerisation domain CU648_16380 PF01546 Peptidase family M20/M25/M40 CU648_16390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_16390 PF13192 Thioredoxin domain CU648_16395 PF00578 AhpC/TSA family CU648_16400 PF01636 Phosphotransferase enzyme family CU648_16410 PF00596 Class II Aldolase and Adducin N-terminal domain CU648_16415 PF01032 FecCD transport family CU648_16420 PF01032 FecCD transport family CU648_16425 PF01497 Periplasmic binding protein CU648_16435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_16450 PF12728 Helix-turn-helix domain CU648_16490 PF00989 PAS fold CU648_16490 PF13426 PAS domain CU648_16490 PF13188 PAS domain CU648_16490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_16490 PF00512 His Kinase A (phospho-acceptor) domain CU648_16510 PF10127 RNA repair pathway DNA polymerase beta family CU648_16515 PF07690 Major Facilitator Superfamily CU648_16520 PF00355 Rieske [2Fe-2S] domain CU648_16520 PF01266 FAD dependent oxidoreductase CU648_16530 PF00535 Glycosyl transferase family 2 CU648_16540 PF00072 Response regulator receiver domain CU648_16545 PF00528 Binding-protein-dependent transport system inner membrane component CU648_16550 PF00497 Bacterial extracellular solute-binding proteins, family 3 CU648_16555 PF00005 ABC transporter CU648_16565 PF12729 Four helix bundle sensory module for signal transduction CU648_16565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_16565 PF00672 HAMP domain CU648_16570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_16570 PF00672 HAMP domain CU648_16570 PF02743 Cache domain CU648_16575 PF16657 Maltogenic Amylase, C-terminal domain CU648_16575 PF00128 Alpha amylase, catalytic domain CU648_16580 PF00367 phosphotransferase system, EIIB CU648_16580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CU648_16580 PF02378 Phosphotransferase system, EIIC CU648_16585 PF03372 Endonuclease/Exonuclease/phosphatase family CU648_16590 PF01061 ABC-2 type transporter CU648_16595 PF01751 Toprim domain CU648_16595 PF01131 DNA topoisomerase CU648_16600 PF02110 Hydroxyethylthiazole kinase family CU648_16605 PF02581 Thiamine monophosphate synthase CU648_16610 PF03605 Anaerobic c4-dicarboxylate membrane transporter CU648_16615 PF00672 HAMP domain CU648_16615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_16620 PF01910 Thiamine-binding protein CU648_16625 PF00528 Binding-protein-dependent transport system inner membrane component CU648_16635 PF00005 ABC transporter CU648_16645 PF12848 ABC transporter CU648_16645 PF00005 ABC transporter CU648_16650 PF00704 Glycosyl hydrolases family 18 CU648_16650 PF00041 Fibronectin type III domain CU648_16675 PF08360 QacR-like protein, C-terminal region CU648_16675 PF00440 Bacterial regulatory proteins, tetR family CU648_16695 PF11700 Vacuole effluxer Atg22 like CU648_16710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CU648_16710 PF09180 Prolyl-tRNA synthetase, C-terminal CU648_16710 PF03129 Anticodon binding domain CU648_16720 PF00480 ROK family CU648_16725 PF02342 TerD domain CU648_16730 PF02342 TerD domain CU648_16735 PF02342 TerD domain CU648_16740 PF03741 Integral membrane protein TerC family CU648_16745 PF14266 Putative component of 'biosynthetic module' CU648_16750 PF05816 Toxic anion resistance protein (TelA) CU648_16760 PF00872 Transposase, Mutator family CU648_16765 PF00583 Acetyltransferase (GNAT) family CU648_16775 PF00583 Acetyltransferase (GNAT) family CU648_16780 PF01636 Phosphotransferase enzyme family CU648_16785 PF00872 Transposase, Mutator family CU648_16795 PF06569 Protein of unknown function (DUF1128) CU648_16800 PF01451 Low molecular weight phosphotyrosine protein phosphatase CU648_16810 PF03631 Virulence factor BrkB CU648_16825 PF00892 EamA-like transporter family CU648_16835 PF10502 Signal peptidase, peptidase S26 CU648_16845 PF09335 SNARE associated Golgi protein CU648_16860 PF16242 Pyridoxamine 5'-phosphate oxidase like CU648_16865 PF01699 Sodium/calcium exchanger protein CU648_16870 PF14167 YfkD-like protein CU648_16875 PF04055 Radical SAM superfamily CU648_16875 PF08756 YfkB-like domain CU648_16885 PF05681 Fumarate hydratase (Fumerase) CU648_16885 PF05683 Fumarase C-terminus CU648_16890 PF01522 Polysaccharide deacetylase CU648_16895 PF00730 HhH-GPD superfamily base excision DNA repair protein CU648_16900 PF05958 tRNA (Uracil-5-)-methyltransferase CU648_16900 PF01938 TRAM domain CU648_16905 PF01416 tRNA pseudouridine synthase CU648_16915 PF00158 Sigma-54 interaction domain CU648_16915 PF13426 PAS domain CU648_16915 PF02954 Bacterial regulatory protein, Fis family CU648_16925 PF00324 Amino acid permease CU648_16930 PF07687 Peptidase dimerisation domain CU648_16930 PF01546 Peptidase family M20/M25/M40 CU648_16960 PF04960 Glutaminase CU648_16970 PF00367 phosphotransferase system, EIIB CU648_16970 PF02378 Phosphotransferase system, EIIC CU648_16975 PF00144 Beta-lactamase CU648_16995 PF00535 Glycosyl transferase family 2 CU648_17000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CU648_17000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CU648_17000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CU648_17005 PF01370 NAD dependent epimerase/dehydratase family CU648_17005 PF02911 Formyl transferase, C-terminal domain CU648_17005 PF00551 Formyl transferase CU648_17010 PF00535 Glycosyl transferase family 2 CU648_17020 PF01228 Glycine radical CU648_17020 PF02901 Pyruvate formate lyase-like CU648_17025 PF04055 Radical SAM superfamily CU648_17030 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CU648_17030 PF04101 Glycosyltransferase family 28 C-terminal domain CU648_17045 PF01979 Amidohydrolase family CU648_17050 PF01370 NAD dependent epimerase/dehydratase family CU648_17050 PF08338 Domain of unknown function (DUF1731) CU648_17055 PF02631 RecX family CU648_17070 PF08176 Small acid-soluble spore protein K family CU648_17075 PF14043 WVELL protein CU648_17080 PF04307 LexA-binding, inner membrane-associated putative hydrolase CU648_17085 PF00730 HhH-GPD superfamily base excision DNA repair protein CU648_17085 PF14815 NUDIX domain CU648_17095 PF04259 Small, acid-soluble spore protein, gamma-type CU648_17100 PF14182 YgaB-like protein CU648_17105 PF04167 Protein of unknown function (DUF402) CU648_17110 PF00005 ABC transporter CU648_17110 PF00664 ABC transporter transmembrane region CU648_17115 PF06081 Aromatic acid exporter family member 1 CU648_17120 PF04898 Glutamate synthase central domain CU648_17120 PF01493 GXGXG motif CU648_17120 PF00310 Glutamine amidotransferases class-II CU648_17120 PF01645 Conserved region in glutamate synthase CU648_17125 PF00202 Aminotransferase class-III CU648_17130 PF00005 ABC transporter CU648_17145 PF07885 Ion channel CU648_17150 PF00578 AhpC/TSA family CU648_17155 PF01475 Ferric uptake regulator family CU648_17160 PF11023 Zinc-ribbon containing domain CU648_17260 PF02899 Phage integrase, N-terminal SAM-like domain CU648_17260 PF00589 Phage integrase family CU648_17280 PF04860 Phage portal protein CU648_17360 PF01709 Transcriptional regulator CU648_17365 PF00293 NUDIX domain CU648_17365 PF13344 Haloacid dehalogenase-like hydrolase CU648_17380 PF00912 Transglycosylase CU648_17380 PF00905 Penicillin binding protein transpeptidase domain CU648_17385 PF13462 Thioredoxin CU648_17395 PF08331 Domain of unknown function (DUF1730) CU648_17400 PF12671 Putative amidase domain CU648_17405 PF00588 SpoU rRNA Methylase family CU648_17410 PF00563 EAL domain CU648_17410 PF03707 Bacterial signalling protein N terminal repeat CU648_17410 PF00990 Diguanylate cyclase, GGDEF domain CU648_17420 PF08298 PrkA AAA domain CU648_17420 PF06798 PrkA serine protein kinase C-terminal domain CU648_17435 PF04285 Protein of unknown function (DUF444) CU648_17450 PF00497 Bacterial extracellular solute-binding proteins, family 3 CU648_17455 PF00005 ABC transporter CU648_17460 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17465 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17470 PF02028 BCCT, betaine/carnitine/choline family transporter CU648_17475 PF01752 Collagenase CU648_17475 PF18496 Collagenase G catalytic helper subdomain CU648_17475 PF08453 Peptidase family M9 N-terminal CU648_17485 PF15975 Flotillin CU648_17485 PF01145 SPFH domain / Band 7 family CU648_17490 PF02743 Cache domain CU648_17490 PF00672 HAMP domain CU648_17490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_17495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CU648_17495 PF17203 Single cache domain 3 CU648_17495 PF00989 PAS fold CU648_17495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_17500 PF12431 Transcriptional regulator CU648_17500 PF00072 Response regulator receiver domain CU648_17505 PF03600 Citrate transporter CU648_17525 PF04309 Glycerol-3-phosphate responsive antiterminator CU648_17530 PF17912 MalK OB fold domain CU648_17530 PF00005 ABC transporter CU648_17535 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17540 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17545 PF13416 Bacterial extracellular solute-binding protein CU648_17550 PF00149 Calcineurin-like phosphoesterase CU648_17555 PF00072 Response regulator receiver domain CU648_17555 PF00486 Transcriptional regulatory protein, C terminal CU648_17560 PF00512 His Kinase A (phospho-acceptor) domain CU648_17560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_17570 PF13529 Peptidase_C39 like family CU648_17575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_17575 PF00672 HAMP domain CU648_17575 PF02743 Cache domain CU648_17580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CU648_17580 PF17203 Single cache domain 3 CU648_17580 PF00989 PAS fold CU648_17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_17585 PF00072 Response regulator receiver domain CU648_17590 PF03390 2-hydroxycarboxylate transporter family CU648_17595 PF00390 Malic enzyme, N-terminal domain CU648_17595 PF03949 Malic enzyme, NAD binding domain CU648_17605 PF00892 EamA-like transporter family CU648_17610 PF00392 Bacterial regulatory proteins, gntR family CU648_17610 PF00155 Aminotransferase class I and II CU648_17620 PF00989 PAS fold CU648_17620 PF00512 His Kinase A (phospho-acceptor) domain CU648_17620 PF18698 Histidine kinase sensor domain CU648_17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_17620 PF00672 HAMP domain CU648_17625 PF00072 Response regulator receiver domain CU648_17625 PF00486 Transcriptional regulatory protein, C terminal CU648_17635 PF13508 Acetyltransferase (GNAT) domain CU648_17635 PF00583 Acetyltransferase (GNAT) family CU648_17640 PF02634 FdhD/NarQ family CU648_17645 PF00037 4Fe-4S binding domain CU648_17645 PF01568 Molydopterin dinucleotide binding domain CU648_17645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CU648_17645 PF00384 Molybdopterin oxidoreductase CU648_17645 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CU648_17650 PF07849 Protein of unknown function (DUF1641) CU648_17660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CU648_17660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CU648_17665 PF13520 Amino acid permease CU648_17675 PF01022 Bacterial regulatory protein, arsR family CU648_17680 PF00403 Heavy-metal-associated domain CU648_17685 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CU648_17685 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CU648_17685 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CU648_17695 PF07504 Fungalysin/Thermolysin Propeptide Motif CU648_17695 PF02868 Thermolysin metallopeptidase, alpha-helical domain CU648_17695 PF01447 Thermolysin metallopeptidase, catalytic domain CU648_17695 PF03413 Peptidase propeptide and YPEB domain CU648_17715 PF04294 VanW like protein CU648_17720 PF03816 Cell envelope-related transcriptional attenuator domain CU648_17725 PF01773 Na+ dependent nucleoside transporter N-terminus CU648_17725 PF07662 Na+ dependent nucleoside transporter C-terminus CU648_17730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_17735 PF00571 CBS domain CU648_17735 PF01595 Cyclin M transmembrane N-terminal domain CU648_17735 PF03471 Transporter associated domain CU648_17740 PF00206 Lyase CU648_17740 PF10415 Fumarase C C-terminus CU648_17745 PF02652 L-lactate permease CU648_17750 PF01022 Bacterial regulatory protein, arsR family CU648_17755 PF08141 Small acid-soluble spore protein H family CU648_17760 PF00854 POT family CU648_17765 PF01497 Periplasmic binding protein CU648_17770 PF01032 FecCD transport family CU648_17775 PF01032 FecCD transport family CU648_17780 PF00005 ABC transporter CU648_17790 PF00155 Aminotransferase class I and II CU648_17795 PF01370 NAD dependent epimerase/dehydratase family CU648_17800 PF13344 Haloacid dehalogenase-like hydrolase CU648_17800 PF00293 NUDIX domain CU648_17805 PF00092 von Willebrand factor type A domain CU648_17810 PF07728 AAA domain (dynein-related subfamily) CU648_17815 PF13091 PLD-like domain CU648_17815 PF13396 Phospholipase_D-nuclease N-terminal CU648_17830 PF03707 Bacterial signalling protein N terminal repeat CU648_17830 PF00990 Diguanylate cyclase, GGDEF domain CU648_17830 PF00563 EAL domain CU648_17835 PF13520 Amino acid permease CU648_17840 PF07702 UTRA domain CU648_17840 PF00392 Bacterial regulatory proteins, gntR family CU648_17845 PF02378 Phosphotransferase system, EIIC CU648_17845 PF00367 phosphotransferase system, EIIB CU648_17850 PF00128 Alpha amylase, catalytic domain CU648_17850 PF16657 Maltogenic Amylase, C-terminal domain CU648_17865 PF03323 Bacillus/Clostridium GerA spore germination protein CU648_17875 PF01636 Phosphotransferase enzyme family CU648_17880 PF01235 Sodium:alanine symporter family CU648_17885 PF00005 ABC transporter CU648_17890 PF00497 Bacterial extracellular solute-binding proteins, family 3 CU648_17895 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17900 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17905 PF00324 Amino acid permease CU648_17930 PF13280 WYL domain CU648_17930 PF08279 HTH domain CU648_17935 PF01872 RibD C-terminal domain CU648_17940 PF00989 PAS fold CU648_17940 PF00512 His Kinase A (phospho-acceptor) domain CU648_17940 PF18698 Histidine kinase sensor domain CU648_17940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_17940 PF00672 HAMP domain CU648_17945 PF00486 Transcriptional regulatory protein, C terminal CU648_17945 PF00072 Response regulator receiver domain CU648_17955 PF00916 Sulfate permease family CU648_17955 PF01740 STAS domain CU648_17960 PF00582 Universal stress protein family CU648_17970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_17975 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17980 PF00528 Binding-protein-dependent transport system inner membrane component CU648_17985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_17985 PF00005 ABC transporter CU648_17990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_17990 PF00005 ABC transporter CU648_17995 PF07690 Major Facilitator Superfamily CU648_18000 PF01047 MarR family CU648_18005 PF07690 Major Facilitator Superfamily CU648_18010 PF00356 Bacterial regulatory proteins, lacI family CU648_18015 PF00294 pfkB family carbohydrate kinase CU648_18020 PF05025 RbsD / FucU transport protein family CU648_18025 PF00005 ABC transporter CU648_18030 PF02653 Branched-chain amino acid transport system / permease component CU648_18035 PF13407 Periplasmic binding protein domain CU648_18040 PF00923 Transaldolase/Fructose-6-phosphate aldolase CU648_18045 PF05547 Immune inhibitor A peptidase M6 CU648_18060 PF00107 Zinc-binding dehydrogenase CU648_18060 PF08240 Alcohol dehydrogenase GroES-like domain CU648_18070 PF00882 Zinc dependent phospholipase C CU648_18075 PF03372 Endonuclease/Exonuclease/phosphatase family CU648_18100 PF02673 Bacitracin resistance protein BacA CU648_18105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_18105 PF02743 Cache domain CU648_18105 PF00672 HAMP domain CU648_18110 PF06725 3D domain CU648_18110 PF01476 LysM domain CU648_18115 PF01381 Helix-turn-helix CU648_18125 PF04203 Sortase domain CU648_18130 PF00854 POT family CU648_18135 PF05525 Branched-chain amino acid transport protein CU648_18150 PF00324 Amino acid permease CU648_18155 PF00860 Permease family CU648_18170 PF13673 Acetyltransferase (GNAT) domain CU648_18180 PF00999 Sodium/hydrogen exchanger family CU648_18180 PF02080 TrkA-C domain CU648_18180 PF02254 TrkA-N domain CU648_18190 PF00510 Cytochrome c oxidase subunit III CU648_18195 PF00115 Cytochrome C and Quinol oxidase polypeptide I CU648_18200 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CU648_18205 PF00324 Amino acid permease CU648_18210 PF13529 Peptidase_C39 like family CU648_18215 PF07687 Peptidase dimerisation domain CU648_18215 PF01546 Peptidase family M20/M25/M40 CU648_18220 PF11755 Protein of unknown function (DUF3311) CU648_18225 PF00474 Sodium:solute symporter family CU648_18230 PF03323 Bacillus/Clostridium GerA spore germination protein CU648_18235 PF03845 Spore germination protein CU648_18240 PF05504 Spore germination B3/ GerAC like, C-terminal CU648_18250 PF02421 Ferrous iron transport protein B CU648_18250 PF17910 FeoB cytosolic helical domain CU648_18250 PF07664 Ferrous iron transport protein B C terminus CU648_18250 PF07670 Nucleoside recognition CU648_18255 PF02421 Ferrous iron transport protein B CU648_18255 PF07670 Nucleoside recognition CU648_18255 PF17910 FeoB cytosolic helical domain CU648_18255 PF07664 Ferrous iron transport protein B C terminus CU648_18260 PF17910 FeoB cytosolic helical domain CU648_18260 PF07670 Nucleoside recognition CU648_18260 PF02421 Ferrous iron transport protein B CU648_18260 PF07664 Ferrous iron transport protein B C terminus CU648_18260 PF04023 FeoA domain CU648_18265 PF12849 PBP superfamily domain CU648_18270 PF00528 Binding-protein-dependent transport system inner membrane component CU648_18275 PF00528 Binding-protein-dependent transport system inner membrane component CU648_18285 PF00873 AcrB/AcrD/AcrF family CU648_18405 PF00571 CBS domain CU648_18425 PF00246 Zinc carboxypeptidase CU648_18425 PF08239 Bacterial SH3 domain CU648_18430 PF03070 TENA/THI-4/PQQC family CU648_18435 PF00005 ABC transporter CU648_18440 PF00528 Binding-protein-dependent transport system inner membrane component CU648_18445 PF09084 NMT1/THI5 like CU648_18450 PF02581 Thiamine monophosphate synthase CU648_18455 PF01266 FAD dependent oxidoreductase CU648_18460 PF02597 ThiS family CU648_18465 PF05690 Thiazole biosynthesis protein ThiG CU648_18470 PF00899 ThiF family CU648_18475 PF08543 Phosphomethylpyrimidine kinase CU648_18505 PF03814 Potassium-transporting ATPase A subunit CU648_18515 PF02669 K+-transporting ATPase, c chain CU648_18520 PF02702 Osmosensitive K+ channel His kinase sensor domain CU648_18525 PF07690 Major Facilitator Superfamily CU648_18530 PF01047 MarR family CU648_18555 PF12704 MacB-like periplasmic core domain CU648_18555 PF02687 FtsX-like permease family CU648_18555 PF00005 ABC transporter CU648_18565 PF02653 Branched-chain amino acid transport system / permease component CU648_18570 PF00005 ABC transporter CU648_18575 PF13407 Periplasmic binding protein domain CU648_18580 PF00860 Permease family CU648_18590 PF03734 L,D-transpeptidase catalytic domain CU648_18590 PF17969 L,D-transpeptidase C-terminal domain CU648_18605 PF00085 Thioredoxin CU648_18610 PF02600 Disulfide bond formation protein DsbB CU648_18615 PF14148 YhdB-like protein CU648_18625 PF03845 Spore germination protein CU648_18635 PF03323 Bacillus/Clostridium GerA spore germination protein CU648_18645 PF00881 Nitroreductase family CU648_18650 PF04293 SpoVR like protein CU648_18655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CU648_18655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_18660 PF02583 Metal-sensitive transcriptional repressor CU648_18665 PF01206 Sulfurtransferase TusA CU648_18665 PF00581 Rhodanese-like domain CU648_18670 PF00753 Metallo-beta-lactamase superfamily CU648_18670 PF00581 Rhodanese-like domain CU648_18675 PF01206 Sulfurtransferase TusA CU648_18685 PF01206 Sulfurtransferase TusA CU648_18685 PF00581 Rhodanese-like domain CU648_18695 PF13686 DsrE/DsrF/DrsH-like family CU648_18700 PF01925 Sulfite exporter TauE/SafE CU648_18710 PF03816 Cell envelope-related transcriptional attenuator domain CU648_18715 PF08240 Alcohol dehydrogenase GroES-like domain CU648_18715 PF00107 Zinc-binding dehydrogenase CU648_18720 PF02690 Na+/Pi-cotransporter CU648_18725 PF07690 Major Facilitator Superfamily CU648_18735 PF00874 PRD domain CU648_18735 PF05043 Mga helix-turn-helix domain CU648_18735 PF08279 HTH domain CU648_18735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CU648_18740 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CU648_18745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CU648_18750 PF02378 Phosphotransferase system, EIIC CU648_18770 PF01476 LysM domain CU648_18770 PF06725 3D domain CU648_18775 PF12704 MacB-like periplasmic core domain CU648_18775 PF02687 FtsX-like permease family CU648_18780 PF00005 ABC transporter CU648_18790 PF09529 Integral membrane protein (intg_mem_TP0381) CU648_18805 PF02687 FtsX-like permease family CU648_18810 PF05525 Branched-chain amino acid transport protein CU648_18815 PF05067 Manganese containing catalase CU648_18820 PF12652 CotJB protein CU648_18825 PF11007 Spore coat associated protein JA (CotJA) CU648_18840 PF02735 Ku70/Ku80 beta-barrel domain CU648_18850 PF09335 SNARE associated Golgi protein CU648_18885 PF13520 Amino acid permease CU648_18890 PF00999 Sodium/hydrogen exchanger family CU648_18900 PF01418 Helix-turn-helix domain, rpiR family CU648_18900 PF01380 SIS domain CU648_18905 PF13580 SIS domain CU648_18910 PF02378 Phosphotransferase system, EIIC CU648_18910 PF00367 phosphotransferase system, EIIB CU648_18920 PF07681 DoxX CU648_18935 PF00892 EamA-like transporter family CU648_18940 PF01037 Lrp/AsnC ligand binding domain CU648_18950 PF00893 Small Multidrug Resistance protein CU648_18955 PF00893 Small Multidrug Resistance protein CU648_18960 PF17934 Tetracyclin repressor-like, C-terminal domain CU648_18960 PF00440 Bacterial regulatory proteins, tetR family CU648_18965 PF07690 Major Facilitator Superfamily CU648_18970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_18970 PF12793 Sugar transport-related sRNA regulator N-term CU648_18975 PF07690 Major Facilitator Superfamily CU648_18985 PF01965 DJ-1/PfpI family CU648_18990 PF00199 Catalase CU648_18990 PF06628 Catalase-related immune-responsive CU648_18990 PF18011 C-terminal domain found in long catalases CU648_19000 PF13520 Amino acid permease CU648_19005 PF01177 Asp/Glu/Hydantoin racemase CU648_19015 PF00171 Aldehyde dehydrogenase family CU648_19035 PF00664 ABC transporter transmembrane region CU648_19035 PF00005 ABC transporter CU648_19040 PF00664 ABC transporter transmembrane region CU648_19040 PF00005 ABC transporter CU648_19050 PF00497 Bacterial extracellular solute-binding proteins, family 3 CU648_19055 PF00528 Binding-protein-dependent transport system inner membrane component CU648_19060 PF00005 ABC transporter CU648_19065 PF00269 Small, acid-soluble spore proteins, alpha/beta type CU648_19075 PF14398 YheC/D like ATP-grasp CU648_19085 PF04286 Protein of unknown function (DUF445) CU648_19090 PF06133 Control of competence regulator ComK, YlbF/YmcA CU648_19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_19100 PF07730 Histidine kinase CU648_19105 PF00072 Response regulator receiver domain CU648_19105 PF00196 Bacterial regulatory proteins, luxR family CU648_19145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CU648_19145 PF00205 Thiamine pyrophosphate enzyme, central domain CU648_19145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CU648_19150 PF03306 Alpha-acetolactate decarboxylase CU648_19160 PF02245 Methylpurine-DNA glycosylase (MPG) CU648_19175 PF01476 LysM domain CU648_19175 PF01471 Putative peptidoglycan binding domain CU648_19175 PF01510 N-acetylmuramoyl-L-alanine amidase CU648_19185 PF04055 Radical SAM superfamily CU648_19190 PF13193 AMP-binding enzyme C-terminal domain CU648_19190 PF00501 AMP-binding enzyme CU648_19205 PF01740 STAS domain CU648_19205 PF00916 Sulfate permease family CU648_19225 PF07516 SecA Wing and Scaffold domain CU648_19225 PF01043 SecA preprotein cross-linking domain CU648_19225 PF07517 SecA DEAD-like domain CU648_19230 PF01943 Polysaccharide biosynthesis protein CU648_19230 PF14667 Polysaccharide biosynthesis C-terminal domain CU648_19240 PF02368 Bacterial Ig-like domain (group 2) CU648_19240 PF00395 S-layer homology domain CU648_19240 PF13205 Bacterial Ig-like domain CU648_19245 PF00395 S-layer homology domain CU648_19255 PF03062 MBOAT, membrane-bound O-acyltransferase family CU648_19265 PF00378 Enoyl-CoA hydratase/isomerase CU648_19285 PF05343 M42 glutamyl aminopeptidase CU648_19290 PF01520 N-acetylmuramoyl-L-alanine amidase CU648_19290 PF00395 S-layer homology domain CU648_19300 PF11121 Protein of unknown function (DUF2639) CU648_19305 PF05544 Proline racemase CU648_19310 PF02423 Ornithine cyclodeaminase/mu-crystallin family CU648_19315 PF02463 RecF/RecN/SMC N terminal domain CU648_19320 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CU648_19335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_19340 PF00528 Binding-protein-dependent transport system inner membrane component CU648_19345 PF12911 N-terminal TM domain of oligopeptide transport permease C CU648_19345 PF00528 Binding-protein-dependent transport system inner membrane component CU648_19350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_19350 PF00005 ABC transporter CU648_19355 PF00005 ABC transporter CU648_19355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_19365 PF00083 Sugar (and other) transporter CU648_19370 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CU648_19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_19375 PF12431 Transcriptional regulator CU648_19375 PF08279 HTH domain CU648_19375 PF00072 Response regulator receiver domain CU648_19380 PF03401 Tripartite tricarboxylate transporter family receptor CU648_19400 PF12728 Helix-turn-helix domain CU648_19400 PF00145 C-5 cytosine-specific DNA methylase CU648_19425 PF00580 UvrD/REP helicase N-terminal domain CU648_19425 PF13361 UvrD-like helicase C-terminal domain CU648_19470 PF06445 GyrI-like small molecule binding domain CU648_19470 PF13411 MerR HTH family regulatory protein CU648_19485 PF03796 DnaB-like helicase C terminal domain CU648_19485 PF00772 DnaB-like helicase N terminal domain CU648_19505 PF01925 Sulfite exporter TauE/SafE CU648_19585 PF01066 CDP-alcohol phosphatidyltransferase CU648_19620 PF02733 Dak1 domain CU648_19635 PF02733 Dak1 domain CU648_19640 PF02525 Flavodoxin-like fold CU648_19645 PF02082 Transcriptional regulator CU648_19650 PF02734 DAK2 domain CU648_19655 PF00082 Subtilase family CU648_19680 PF17874 MalT-like TPR region CU648_19680 PF18801 response regulator aspartate phosphatase H, N terminal CU648_19695 PF00672 HAMP domain CU648_19695 PF01966 HD domain CU648_19710 PF00296 Luciferase-like monooxygenase CU648_19775 PF00395 S-layer homology domain CU648_19795 PF00005 ABC transporter CU648_19830 PF11181 Heat induced stress protein YflT CU648_19835 PF05532 CsbD-like CU648_19850 PF01740 STAS domain CU648_19855 PF13581 Histidine kinase-like ATPase domain CU648_19860 PF04542 Sigma-70 region 2 CU648_19860 PF04539 Sigma-70 region 3 CU648_19860 PF04545 Sigma-70, region 4 CU648_19870 PF13426 PAS domain CU648_19870 PF07228 Stage II sporulation protein E (SpoIIE) CU648_19875 PF01739 CheR methyltransferase, SAM binding domain CU648_19875 PF03705 CheR methyltransferase, all-alpha domain CU648_19880 PF01627 Hpt domain CU648_19880 PF00072 Response regulator receiver domain CU648_19880 PF00497 Bacterial extracellular solute-binding proteins, family 3 CU648_19880 PF00512 His Kinase A (phospho-acceptor) domain CU648_19880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_19905 PF01906 Putative heavy-metal-binding CU648_19925 PF11121 Protein of unknown function (DUF2639) CU648_19940 PF00149 Calcineurin-like phosphoesterase CU648_19945 PF13514 AAA domain CU648_19950 PF01966 HD domain CU648_19950 PF01336 OB-fold nucleic acid binding domain CU648_19975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_19980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_19985 PF18801 response regulator aspartate phosphatase H, N terminal CU648_19995 PF00561 alpha/beta hydrolase fold CU648_19995 PF08386 TAP-like protein CU648_20025 PF04309 Glycerol-3-phosphate responsive antiterminator CU648_20030 PF00230 Major intrinsic protein CU648_20035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CU648_20035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CU648_20040 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CU648_20040 PF01266 FAD dependent oxidoreductase CU648_20060 PF04542 Sigma-70 region 2 CU648_20060 PF08281 Sigma-70, region 4 CU648_20085 PF07690 Major Facilitator Superfamily CU648_20090 PF07690 Major Facilitator Superfamily CU648_20100 PF13538 UvrD-like helicase C-terminal domain CU648_20125 PF01047 MarR family CU648_20130 PF12732 YtxH-like protein CU648_20135 PF01230 HIT domain CU648_20145 PF00005 ABC transporter CU648_20150 PF05975 Bacterial ABC transporter protein EcsB CU648_20155 PF12787 EcsC protein family CU648_20210 PF17934 Tetracyclin repressor-like, C-terminal domain CU648_20210 PF00440 Bacterial regulatory proteins, tetR family CU648_20220 PF03703 Bacterial PH domain CU648_20225 PF03703 Bacterial PH domain CU648_20235 PF00395 S-layer homology domain CU648_20235 PF01520 N-acetylmuramoyl-L-alanine amidase CU648_20265 PF03703 Bacterial PH domain CU648_20270 PF03703 Bacterial PH domain CU648_20275 PF03992 Antibiotic biosynthesis monooxygenase CU648_20280 PF00912 Transglycosylase CU648_20280 PF00905 Penicillin binding protein transpeptidase domain CU648_20285 PF01208 Uroporphyrinogen decarboxylase (URO-D) CU648_20325 PF17932 Tetracyclin repressor-like, C-terminal domain CU648_20325 PF00440 Bacterial regulatory proteins, tetR family CU648_20350 PF13302 Acetyltransferase (GNAT) domain CU648_20355 PF00356 Bacterial regulatory proteins, lacI family CU648_20360 PF14149 YhfH-like protein CU648_20365 PF12706 Beta-lactamase superfamily domain CU648_20370 PF03099 Biotin/lipoate A/B protein ligase family CU648_20370 PF10437 Bacterial lipoate protein ligase C-terminus CU648_20380 PF13193 AMP-binding enzyme C-terminal domain CU648_20380 PF00501 AMP-binding enzyme CU648_20390 PF01520 N-acetylmuramoyl-L-alanine amidase CU648_20390 PF00395 S-layer homology domain CU648_20410 PF07968 Leukocidin/Hemolysin toxin family CU648_20415 PF00149 Calcineurin-like phosphoesterase CU648_20425 PF01966 HD domain CU648_20430 PF00005 ABC transporter CU648_20445 PF12833 Helix-turn-helix domain CU648_20450 PF01638 HxlR-like helix-turn-helix CU648_20455 PF07690 Major Facilitator Superfamily CU648_20465 PF04542 Sigma-70 region 2 CU648_20465 PF08281 Sigma-70, region 4 CU648_20470 PF12833 Helix-turn-helix domain CU648_20470 PF06445 GyrI-like small molecule binding domain CU648_20485 PF00512 His Kinase A (phospho-acceptor) domain CU648_20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_20490 PF00072 Response regulator receiver domain CU648_20490 PF00486 Transcriptional regulatory protein, C terminal CU648_20515 PF16491 CAAX prenyl protease N-terminal, five membrane helices CU648_20515 PF01435 Peptidase family M48 CU648_20520 PF00892 EamA-like transporter family CU648_20525 PF00395 S-layer homology domain CU648_20525 PF03424 Carbohydrate binding domain (family 17/28) CU648_20525 PF00150 Cellulase (glycosyl hydrolase family 5) CU648_20535 PF00395 S-layer homology domain CU648_20540 PF01274 Malate synthase CU648_20545 PF00463 Isocitrate lyase family CU648_20555 PF00313 'Cold-shock' DNA-binding domain CU648_20570 PF06338 ComK protein CU648_20575 PF09335 SNARE associated Golgi protein CU648_20580 PF10502 Signal peptidase, peptidase S26 CU648_20585 PF13361 UvrD-like helicase C-terminal domain CU648_20585 PF12705 PD-(D/E)XK nuclease superfamily CU648_20590 PF13361 UvrD-like helicase C-terminal domain CU648_20590 PF00580 UvrD/REP helicase N-terminal domain CU648_20590 PF12705 PD-(D/E)XK nuclease superfamily CU648_20600 PF10676 Spore germination protein gerPA/gerPF CU648_20605 PF10970 Spore germination protein GerPE CU648_20615 PF10737 Spore germination protein GerPC CU648_20620 PF10803 Spore germination GerPB CU648_20625 PF10676 Spore germination protein gerPA/gerPF CU648_20635 PF01557 Fumarylacetoacetate (FAA) hydrolase family CU648_20645 PF00202 Aminotransferase class-III CU648_20650 PF07457 Protein of unknown function (DUF1516) CU648_20660 PF00733 Asparagine synthase CU648_20660 PF13537 Glutamine amidotransferase domain CU648_20670 PF06628 Catalase-related immune-responsive CU648_20670 PF00199 Catalase CU648_20675 PF00909 Ammonium Transporter Family CU648_20680 PF00128 Alpha amylase, catalytic domain CU648_20690 PF04461 Protein of unknown function (DUF520) CU648_20695 PF13509 S1 domain CU648_20695 PF17783 CvfB-like winged helix domain CU648_20700 PF00639 PPIC-type PPIASE domain CU648_20710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_20710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_20715 PF12758 Protein of unknown function (DUF3813) CU648_20735 PF14168 YjzC-like protein CU648_20740 PF10431 C-terminal, D2-small domain, of ClpB protein CU648_20740 PF00004 ATPase family associated with various cellular activities (AAA) CU648_20740 PF17871 AAA lid domain CU648_20740 PF07724 AAA domain (Cdc48 subfamily) CU648_20740 PF02861 Clp amino terminal domain, pathogenicity island component CU648_20760 PF10815 ComZ CU648_20770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CU648_20770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CU648_20775 PF00109 Beta-ketoacyl synthase, N-terminal domain CU648_20775 PF02801 Beta-ketoacyl synthase, C-terminal domain CU648_20780 PF10026 Predicted Zn-dependent protease (DUF2268) CU648_20785 PF12227 Protein of unknown function (DUF3603) CU648_20795 PF00579 tRNA synthetases class I (W and Y) CU648_20810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_20815 PF00528 Binding-protein-dependent transport system inner membrane component CU648_20820 PF12911 N-terminal TM domain of oligopeptide transport permease C CU648_20820 PF00528 Binding-protein-dependent transport system inner membrane component CU648_20825 PF00005 ABC transporter CU648_20825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_20830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CU648_20830 PF00005 ABC transporter CU648_20835 PF01554 MatE CU648_20840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_20845 PF01609 Transposase DDE domain CU648_20860 PF03960 ArsC family CU648_20870 PF03741 Integral membrane protein TerC family CU648_20875 PF05389 Negative regulator of genetic competence (MecA) CU648_20880 PF13396 Phospholipase_D-nuclease N-terminal CU648_20880 PF13091 PLD-like domain CU648_20890 PF01432 Peptidase family M3 CU648_20890 PF08439 Oligopeptidase F CU648_20905 PF01152 Bacterial-like globin CU648_20910 PF01928 CYTH domain CU648_20920 PF04607 Region found in RelA / SpoT proteins CU648_20925 PF01513 ATP-NAD kinase CU648_20930 PF00849 RNA pseudouridylate synthase CU648_20940 PF00149 Calcineurin-like phosphoesterase CU648_20945 PF01098 Cell cycle protein CU648_20950 PF00535 Glycosyl transferase family 2 CU648_20955 PF08241 Methyltransferase domain CU648_20960 PF05711 Macrocin-O-methyltransferase (TylF) CU648_20970 PF00535 Glycosyl transferase family 2 CU648_20970 PF13181 Tetratricopeptide repeat CU648_20990 PF00483 Nucleotidyl transferase CU648_20995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CU648_21000 PF16363 GDP-mannose 4,6 dehydratase CU648_21005 PF04321 RmlD substrate binding domain CU648_21025 PF07098 Protein of unknown function (DUF1360) CU648_21045 PF13361 UvrD-like helicase C-terminal domain CU648_21045 PF00580 UvrD/REP helicase N-terminal domain CU648_21050 PF13673 Acetyltransferase (GNAT) domain CU648_21060 PF00756 Putative esterase CU648_21075 PF02368 Bacterial Ig-like domain (group 2) CU648_21080 PF00474 Sodium:solute symporter family CU648_21095 PF00591 Glycosyl transferase family, a/b domain CU648_21095 PF00117 Glutamine amidotransferase class-I CU648_21095 PF02885 Glycosyl transferase family, helical bundle domain CU648_21100 PF00591 Glycosyl transferase family, a/b domain CU648_21100 PF02885 Glycosyl transferase family, helical bundle domain CU648_21105 PF00218 Indole-3-glycerol phosphate synthase CU648_21110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CU648_21115 PF00291 Pyridoxal-phosphate dependent enzyme CU648_21120 PF00290 Tryptophan synthase alpha chain CU648_21130 PF02652 L-lactate permease CU648_21135 PF10042 Uncharacterized conserved protein (DUF2278) CU648_21165 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_21165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CU648_21195 PF02817 e3 binding domain CU648_21195 PF00364 Biotin-requiring enzyme CU648_21195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CU648_21200 PF16870 2-oxoglutarate dehydrogenase C-terminal CU648_21200 PF00676 Dehydrogenase E1 component CU648_21200 PF02779 Transketolase, pyrimidine binding domain CU648_21205 PF01381 Helix-turn-helix CU648_21295 PF13649 Methyltransferase domain CU648_21310 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_21310 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_21320 PF12389 Camelysin metallo-endopeptidase CU648_21330 PF12389 Camelysin metallo-endopeptidase CU648_21335 PF08671 Anti-repressor SinI CU648_21335 PF01381 Helix-turn-helix CU648_21345 PF05547 Immune inhibitor A peptidase M6 CU648_21350 PF00171 Aldehyde dehydrogenase family CU648_21355 PF00005 ABC transporter CU648_21355 PF08402 TOBE domain CU648_21360 PF00528 Binding-protein-dependent transport system inner membrane component CU648_21365 PF00528 Binding-protein-dependent transport system inner membrane component CU648_21370 PF13416 Bacterial extracellular solute-binding protein CU648_21380 PF03176 MMPL family CU648_21390 PF00849 RNA pseudouridylate synthase CU648_21390 PF01479 S4 domain CU648_21400 PF00188 Cysteine-rich secretory protein family CU648_21405 PF13183 4Fe-4S dicluster domain CU648_21405 PF02754 Cysteine-rich domain CU648_21410 PF01565 FAD binding domain CU648_21410 PF02913 FAD linked oxidases, C-terminal domain CU648_21415 PF05651 Putative sugar diacid recognition CU648_21415 PF13556 PucR C-terminal helix-turn-helix domain CU648_21415 PF17853 GGDEF-like domain CU648_21425 PF00486 Transcriptional regulatory protein, C terminal CU648_21425 PF00072 Response regulator receiver domain CU648_21430 PF18698 Histidine kinase sensor domain CU648_21430 PF00989 PAS fold CU648_21430 PF00512 His Kinase A (phospho-acceptor) domain CU648_21430 PF00672 HAMP domain CU648_21430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_21435 PF00392 Bacterial regulatory proteins, gntR family CU648_21435 PF07729 FCD domain CU648_21440 PF02754 Cysteine-rich domain CU648_21445 PF11870 Domain of unknown function (DUF3390) CU648_21445 PF13183 4Fe-4S dicluster domain CU648_21445 PF02589 LUD domain CU648_21450 PF02589 LUD domain CU648_21455 PF06750 Bacterial Peptidase A24 N-terminal domain CU648_21455 PF01478 Type IV leader peptidase family CU648_21465 PF01226 Formate/nitrite transporter CU648_21470 PF03741 Integral membrane protein TerC family CU648_21475 PF02386 Cation transport protein CU648_21480 PF00269 Small, acid-soluble spore proteins, alpha/beta type CU648_21485 PF01575 MaoC like domain CU648_21510 PF00561 alpha/beta hydrolase fold CU648_21520 PF02386 Cation transport protein CU648_21545 PF00005 ABC transporter CU648_21545 PF08402 TOBE domain CU648_21550 PF00528 Binding-protein-dependent transport system inner membrane component CU648_21555 PF13419 Haloacid dehalogenase-like hydrolase CU648_21560 PF00266 Aminotransferase class-V CU648_21570 PF00455 DeoR C terminal sensor domain CU648_21570 PF08220 DeoR-like helix-turn-helix domain CU648_21585 PF00596 Class II Aldolase and Adducin N-terminal domain CU648_21595 PF04748 Divergent polysaccharide deacetylase CU648_21600 PF09388 Spo0E like sporulation regulatory protein CU648_21605 PF00512 His Kinase A (phospho-acceptor) domain CU648_21605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_21605 PF02743 Cache domain CU648_21610 PF01047 MarR family CU648_21620 PF12867 DinB superfamily CU648_21630 PF13188 PAS domain CU648_21630 PF00512 His Kinase A (phospho-acceptor) domain CU648_21630 PF00989 PAS fold CU648_21630 PF13426 PAS domain CU648_21630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_21635 PF06508 Queuosine biosynthesis protein QueC CU648_21640 PF01242 6-pyruvoyl tetrahydropterin synthase CU648_21645 PF04055 Radical SAM superfamily CU648_21650 PF14489 QueF-like protein CU648_21655 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CU648_21690 PF07972 NrdI Flavodoxin like CU648_21700 PF01844 HNH endonuclease CU648_21710 PF00268 Ribonucleotide reductase, small chain CU648_21715 PF00392 Bacterial regulatory proteins, gntR family CU648_21720 PF00005 ABC transporter CU648_21730 PF00005 ABC transporter CU648_21750 PF01037 Lrp/AsnC ligand binding domain CU648_21760 PF00857 Isochorismatase family CU648_21770 PF02016 LD-carboxypeptidase N-terminal domain CU648_21770 PF17676 LD-carboxypeptidase C-terminal domain CU648_21775 PF03060 Nitronate monooxygenase CU648_21780 PF04914 DltD protein CU648_21785 PF00550 Phosphopantetheine attachment site CU648_21790 PF03062 MBOAT, membrane-bound O-acyltransferase family CU648_21795 PF00501 AMP-binding enzyme CU648_21795 PF13193 AMP-binding enzyme C-terminal domain CU648_21805 PF07687 Peptidase dimerisation domain CU648_21805 PF01546 Peptidase family M20/M25/M40 CU648_21815 PF00258 Flavodoxin CU648_21830 PF01636 Phosphotransferase enzyme family CU648_21855 PF01554 MatE CU648_21860 PF02673 Bacitracin resistance protein BacA CU648_21875 PF01047 MarR family CU648_21885 PF00375 Sodium:dicarboxylate symporter family CU648_21890 PF02386 Cation transport protein CU648_21900 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CU648_21915 PF03698 Uncharacterised protein family (UPF0180) CU648_21930 PF01063 Amino-transferase class IV CU648_21935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CU648_21935 PF00205 Thiamine pyrophosphate enzyme, central domain CU648_21935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CU648_21940 PF01842 ACT domain CU648_21940 PF10369 Small subunit of acetolactate synthase CU648_21945 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CU648_21945 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CU648_21950 PF08502 LeuA allosteric (dimerisation) domain CU648_21950 PF00682 HMGL-like CU648_21955 PF00180 Isocitrate/isopropylmalate dehydrogenase CU648_21960 PF00330 Aconitase family (aconitate hydratase) CU648_21965 PF00694 Aconitase C-terminal domain CU648_21970 PF13393 Histidyl-tRNA synthetase CU648_21975 PF01634 ATP phosphoribosyltransferase CU648_21980 PF00815 Histidinol dehydrogenase CU648_21985 PF00475 Imidazoleglycerol-phosphate dehydratase CU648_21990 PF00117 Glutamine amidotransferase class-I CU648_21995 PF00977 Histidine biosynthesis protein CU648_22000 PF00977 Histidine biosynthesis protein CU648_22005 PF01502 Phosphoribosyl-AMP cyclohydrolase CU648_22010 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CU648_22015 PF02811 PHP domain CU648_22025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CU648_22025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CU648_22030 PF01066 CDP-alcohol phosphatidyltransferase CU648_22035 PF00884 Sulfatase CU648_22045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CU648_22045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CU648_22055 PF01507 Phosphoadenosine phosphosulfate reductase family CU648_22060 PF14306 PUA-like domain CU648_22060 PF01747 ATP-sulfurylase CU648_22070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CU648_22070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CU648_22080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CU648_22085 PF01903 CbiX CU648_22100 PF00209 Sodium:neurotransmitter symporter family CU648_22110 PF00375 Sodium:dicarboxylate symporter family CU648_22120 PF03553 Na+/H+ antiporter family CU648_22135 PF09922 Cell wall-active antibiotics response 4TMS YvqF CU648_22140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_22140 PF00672 HAMP domain CU648_22140 PF07730 Histidine kinase CU648_22145 PF00072 Response regulator receiver domain CU648_22145 PF00196 Bacterial regulatory proteins, luxR family CU648_22155 PF05525 Branched-chain amino acid transport protein CU648_22165 PF08241 Methyltransferase domain CU648_22190 PF00175 Oxidoreductase NAD-binding domain CU648_22190 PF00042 Globin CU648_22190 PF00970 Oxidoreductase FAD-binding domain CU648_22210 PF01925 Sulfite exporter TauE/SafE CU648_22215 PF01384 Phosphate transporter family CU648_22220 PF01865 Protein of unknown function DUF47 CU648_22225 PF00905 Penicillin binding protein transpeptidase domain CU648_22225 PF00912 Transglycosylase CU648_22240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_22240 PF00989 PAS fold CU648_22240 PF00512 His Kinase A (phospho-acceptor) domain CU648_22245 PF01904 Protein of unknown function DUF72 CU648_22255 PF00589 Phage integrase family CU648_22260 PF00989 PAS fold CU648_22260 PF16736 Single Cache-like CU648_22260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_22260 PF00512 His Kinase A (phospho-acceptor) domain CU648_22265 PF01048 Phosphorylase superfamily CU648_22275 PF03706 Lysylphosphatidylglycerol synthase TM region CU648_22275 PF09924 Uncharacterised conserved protein (DUF2156) CU648_22290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CU648_22290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CU648_22295 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_22295 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_22300 PF07670 Nucleoside recognition CU648_22305 PF07670 Nucleoside recognition CU648_22310 PF00849 RNA pseudouridylate synthase CU648_22310 PF01479 S4 domain CU648_22315 PF00578 AhpC/TSA family CU648_22320 PF05140 ResB-like family CU648_22325 PF01578 Cytochrome C assembly protein CU648_22330 PF00486 Transcriptional regulatory protein, C terminal CU648_22330 PF00072 Response regulator receiver domain CU648_22335 PF00989 PAS fold CU648_22335 PF00672 HAMP domain CU648_22335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_22335 PF18698 Histidine kinase sensor domain CU648_22335 PF00512 His Kinase A (phospho-acceptor) domain CU648_22340 PF01923 Cobalamin adenosyltransferase CU648_22345 PF01551 Peptidase family M23 CU648_22355 PF12822 ECF transporter, substrate-specific component CU648_22370 PF00270 DEAD/DEAH box helicase CU648_22370 PF00271 Helicase conserved C-terminal domain CU648_22375 PF02517 CPBP intramembrane metalloprotease CU648_22385 PF00149 Calcineurin-like phosphoesterase CU648_22390 PF02310 B12 binding domain CU648_22390 PF13411 MerR HTH family regulatory protein CU648_22390 PF02607 B12 binding domain CU648_22395 PF05389 Negative regulator of genetic competence (MecA) CU648_22400 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CU648_22400 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CU648_22425 PF17763 Glutaminase/Asparaginase C-terminal domain CU648_22425 PF00710 Asparaginase, N-terminal CU648_22435 PF02224 Cytidylate kinase CU648_22440 PF00575 S1 RNA binding domain CU648_22445 PF01070 FMN-dependent dehydrogenase CU648_22450 PF14140 YpzI-like protein CU648_22460 PF14045 YIEGIA protein CU648_22470 PF01926 50S ribosome-binding GTPase CU648_22470 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CU648_22475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CU648_22475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CU648_22485 PF10966 Protein of unknown function (DUF2768) CU648_22495 PF09547 Stage IV sporulation protein A (spore_IV_A) CU648_22500 PF00216 Bacterial DNA-binding protein CU648_22505 PF01227 GTP cyclohydrolase I CU648_22510 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CU648_22515 PF01209 ubiE/COQ5 methyltransferase family CU648_22520 PF00348 Polyprenyl synthetase CU648_22525 PF00334 Nucleoside diphosphate kinase CU648_22530 PF01264 Chorismate synthase CU648_22535 PF01761 3-dehydroquinate synthase CU648_22540 PF00155 Aminotransferase class I and II CU648_22550 PF08864 UPF0302 domain CU648_22550 PF08858 IDEAL domain CU648_22555 PF10673 Protein of unknown function (DUF2487) CU648_22560 PF00355 Rieske [2Fe-2S] domain CU648_22565 PF00033 Cytochrome b/b6/petB CU648_22570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CU648_22570 PF00032 Cytochrome b(C-terminal)/b6/petD CU648_22580 PF07187 Protein of unknown function (DUF1405) CU648_22590 PF09577 Sporulation protein YpjB (SpoYpjB) CU648_22595 PF04298 Putative neutral zinc metallopeptidase CU648_22605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_22605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_22615 PF03819 MazG nucleotide pyrophosphohydrolase domain CU648_22620 PF05173 Dihydrodipicolinate reductase, C-terminus CU648_22620 PF01113 Dihydrodipicolinate reductase, N-terminus CU648_22625 PF02142 MGS-like domain CU648_22630 PF02585 GlcNAc-PI de-N-acetylase CU648_22635 PF00534 Glycosyl transferases group 1 CU648_22635 PF13439 Glycosyltransferase Family 4 CU648_22640 PF01743 Poly A polymerase head domain CU648_22640 PF13735 tRNA nucleotidyltransferase domain 2 putative CU648_22640 PF12627 Probable RNA and SrmB- binding site of polymerase A CU648_22645 PF03099 Biotin/lipoate A/B protein ligase family CU648_22645 PF08279 HTH domain CU648_22645 PF02237 Biotin protein ligase C terminal domain CU648_22660 PF02548 Ketopantoate hydroxymethyltransferase CU648_22665 PF02569 Pantoate-beta-alanine ligase CU648_22670 PF02261 Aspartate decarboxylase CU648_22675 PF04851 Type III restriction enzyme, res subunit CU648_22675 PF13307 Helicase C-terminal domain CU648_22675 PF00929 Exonuclease CU648_22680 PF14084 Protein of unknown function (DUF4264) CU648_22690 PF00155 Aminotransferase class I and II CU648_22695 PF07261 Replication initiation and membrane attachment CU648_22700 PF10576 Iron-sulfur binding domain of endonuclease III CU648_22700 PF00633 Helix-hairpin-helix motif CU648_22700 PF00730 HhH-GPD superfamily base excision DNA repair protein CU648_22710 PF00912 Transglycosylase CU648_22710 PF00905 Penicillin binding protein transpeptidase domain CU648_22715 PF03838 Recombination protein U CU648_22720 PF10720 Protein of unknown function (DUF2515) CU648_22755 PF06908 YspA SLOG family CU648_22760 PF05103 DivIVA protein CU648_22770 PF01170 Putative RNA methylase family UPF0020 CU648_22770 PF02926 THUMP domain CU648_22780 PF13307 Helicase C-terminal domain CU648_22785 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CU648_22795 PF01636 Phosphotransferase enzyme family CU648_22800 PF00557 Metallopeptidase family M24 CU648_22805 PF00156 Phosphoribosyl transferase domain CU648_22810 PF00860 Permease family CU648_22815 PF04235 Protein of unknown function (DUF418) CU648_22825 PF00350 Dynamin family CU648_22835 PF00583 Acetyltransferase (GNAT) family CU648_22840 PF10752 Protein of unknown function (DUF2533) CU648_22845 PF00581 Rhodanese-like domain CU648_22880 PF03738 Glutathionylspermidine synthase preATP-grasp CU648_22890 PF00689 Cation transporting ATPase, C-terminus CU648_22890 PF00690 Cation transporter/ATPase, N-terminus CU648_22895 PF01367 5'-3' exonuclease, C-terminal SAM fold CU648_22895 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CU648_22910 PF13673 Acetyltransferase (GNAT) domain CU648_22910 PF18014 Acetyltransferase (GNAT) domain CU648_22930 PF13456 Reverse transcriptase-like CU648_22935 PF01263 Aldose 1-epimerase CU648_22960 PF00313 'Cold-shock' DNA-binding domain CU648_22970 PF01810 LysE type translocator CU648_22985 PF04341 Protein of unknown function, DUF485 CU648_22990 PF00474 Sodium:solute symporter family CU648_22995 PF00202 Aminotransferase class-III CU648_23010 PF00999 Sodium/hydrogen exchanger family CU648_23015 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CU648_23015 PF00753 Metallo-beta-lactamase superfamily CU648_23015 PF17770 Ribonuclease J C-terminal domain CU648_23065 PF01022 Bacterial regulatory protein, arsR family CU648_23070 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_23090 PF01022 Bacterial regulatory protein, arsR family CU648_23095 PF01758 Sodium Bile acid symporter family CU648_23100 PF01451 Low molecular weight phosphotyrosine protein phosphatase CU648_23105 PF06953 Arsenical resistance operon trans-acting repressor ArsD CU648_23110 PF02374 Anion-transporting ATPase CU648_23125 PF06445 GyrI-like small molecule binding domain CU648_23125 PF13411 MerR HTH family regulatory protein CU648_23135 PF04239 Protein of unknown function (DUF421) CU648_23140 PF02698 DUF218 domain CU648_23150 PF00881 Nitroreductase family CU648_23195 PF17209 Hfq protein CU648_23205 PF01618 MotA/TolQ/ExbB proton channel family CU648_23210 PF00691 OmpA family CU648_23210 PF13677 Membrane MotB of proton-channel complex MotA/MotB CU648_23215 PF00072 Response regulator receiver domain CU648_23220 PF01627 Hpt domain CU648_23220 PF01584 CheW-like domain CU648_23220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_23220 PF07194 P2 response regulator binding domain CU648_23220 PF02895 Signal transducing histidine kinase, homodimeric domain CU648_23225 PF04509 CheC-like family CU648_23225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CU648_23240 PF01739 CheR methyltransferase, SAM binding domain CU648_23240 PF03705 CheR methyltransferase, all-alpha domain CU648_23260 PF00460 Flagella basal body rod protein CU648_23260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CU648_23265 PF00700 Bacterial flagellin C-terminal helical region CU648_23265 PF00669 Bacterial flagellin N-terminal helical region CU648_23270 PF07196 Flagellin hook IN motif CU648_23270 PF02465 Flagellar hook-associated protein 2 N-terminus CU648_23270 PF07195 Flagellar hook-associated protein 2 C-terminus CU648_23285 PF00460 Flagella basal body rod protein CU648_23290 PF00460 Flagella basal body rod protein CU648_23290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CU648_23295 PF02049 Flagellar hook-basal body complex protein FliE CU648_23300 PF01514 Secretory protein of YscJ/FliF family CU648_23300 PF08345 Flagellar M-ring protein C-terminal CU648_23305 PF14841 FliG middle domain CU648_23305 PF14842 FliG N-terminal domain CU648_23305 PF01706 FliG C-terminal domain CU648_23315 PF02874 ATP synthase alpha/beta family, beta-barrel domain CU648_23315 PF18269 T3SS EscN ATPase C-terminal domain CU648_23315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CU648_23335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CU648_23335 PF00460 Flagella basal body rod protein CU648_23335 PF07559 Flagellar basal body protein FlaE CU648_23350 PF00072 Response regulator receiver domain CU648_23350 PF01584 CheW-like domain CU648_23355 PF12181 DNA binding domain of the motility gene repressor (MogR) CU648_23360 PF00669 Bacterial flagellin N-terminal helical region CU648_23360 PF00700 Bacterial flagellin C-terminal helical region CU648_23365 PF00700 Bacterial flagellin C-terminal helical region CU648_23365 PF00669 Bacterial flagellin N-terminal helical region CU648_23365 PF00669 Bacterial flagellin N-terminal helical region CU648_23365 PF00700 Bacterial flagellin C-terminal helical region CU648_23370 PF01464 Transglycosylase SLT domain CU648_23380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CU648_23380 PF02154 Flagellar motor switch protein FliM CU648_23385 PF04509 CheC-like family CU648_23385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CU648_23395 PF00813 FliP family CU648_23400 PF01313 Bacterial export proteins, family 3 CU648_23410 PF01312 FlhB HrpN YscU SpaS Family CU648_23415 PF00771 FHIPEP family CU648_23420 PF00448 SRP54-type protein, GTPase domain CU648_23425 PF00460 Flagella basal body rod protein CU648_23425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CU648_23430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CU648_23430 PF01411 tRNA synthetases class II (A) CU648_23430 PF02272 DHHA1 domain CU648_23455 PF00440 Bacterial regulatory proteins, tetR family CU648_23455 PF17932 Tetracyclin repressor-like, C-terminal domain CU648_23460 PF17329 Family of unknown function (DUF5367) CU648_23485 PF03992 Antibiotic biosynthesis monooxygenase CU648_23490 PF08141 Small acid-soluble spore protein H family CU648_23515 PF08402 TOBE domain CU648_23515 PF00005 ABC transporter CU648_23525 PF00528 Binding-protein-dependent transport system inner membrane component CU648_23530 PF00753 Metallo-beta-lactamase superfamily CU648_23530 PF12706 Beta-lactamase superfamily domain CU648_23540 PF10787 Uncharacterised protein from bacillus cereus group CU648_23560 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_23560 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_23565 PF00300 Histidine phosphatase superfamily (branch 1) CU648_23580 PF01047 MarR family CU648_23590 PF13537 Glutamine amidotransferase domain CU648_23590 PF00733 Asparagine synthase CU648_23610 PF16916 Dimerisation domain of Zinc Transporter CU648_23610 PF01545 Cation efflux family CU648_23620 PF00392 Bacterial regulatory proteins, gntR family CU648_23620 PF07729 FCD domain CU648_23625 PF00892 EamA-like transporter family CU648_23630 PF02492 CobW/HypB/UreG, nucleotide-binding domain CU648_23630 PF07683 Cobalamin synthesis protein cobW C-terminal domain CU648_23640 PF03773 Predicted permease CU648_23655 PF03553 Na+/H+ antiporter family CU648_23660 PF00206 Lyase CU648_23660 PF10415 Fumarase C C-terminus CU648_23675 PF00753 Metallo-beta-lactamase superfamily CU648_23685 PF01554 MatE CU648_23695 PF03575 Peptidase family S51 CU648_23715 PF02683 Cytochrome C biogenesis protein transmembrane region CU648_23720 PF00578 AhpC/TSA family CU648_23740 PF00291 Pyridoxal-phosphate dependent enzyme CU648_23745 PF04286 Protein of unknown function (DUF445) CU648_23775 PF00196 Bacterial regulatory proteins, luxR family CU648_23775 PF00072 Response regulator receiver domain CU648_23780 PF13185 GAF domain CU648_23780 PF13492 GAF domain CU648_23780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_23780 PF07730 Histidine kinase CU648_23785 PF00005 ABC transporter CU648_23800 PF13091 PLD-like domain CU648_23805 PF00696 Amino acid kinase family CU648_23810 PF00375 Sodium:dicarboxylate symporter family CU648_23815 PF00206 Lyase CU648_23815 PF10415 Fumarase C C-terminus CU648_23820 PF03949 Malic enzyme, NAD binding domain CU648_23820 PF00390 Malic enzyme, N-terminal domain CU648_23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_23830 PF08664 YcbB domain CU648_23830 PF00072 Response regulator receiver domain CU648_23835 PF04434 SWIM zinc finger CU648_23835 PF00271 Helicase conserved C-terminal domain CU648_23835 PF00176 SNF2 family N-terminal domain CU648_23855 PF03590 Aspartate-ammonia ligase CU648_23860 PF01381 Helix-turn-helix CU648_23870 PF13840 ACT domain CU648_23870 PF00696 Amino acid kinase family CU648_23885 PF13761 Domain of unknown function (DUF4166) CU648_23890 PF14158 YndJ-like protein CU648_23895 PF00293 NUDIX domain CU648_23900 PF00395 S-layer homology domain CU648_23900 PF02368 Bacterial Ig-like domain (group 2) CU648_23910 PF07690 Major Facilitator Superfamily CU648_23925 PF02554 Carbon starvation protein CstA CU648_23930 PF03976 Polyphosphate kinase 2 (PPK2) CU648_23935 PF03551 Transcriptional regulator PadR-like family CU648_23935 PF10400 Virulence activator alpha C-term CU648_23940 PF07690 Major Facilitator Superfamily CU648_23945 PF07690 Major Facilitator Superfamily CU648_23950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CU648_23950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CU648_23960 PF01926 50S ribosome-binding GTPase CU648_23960 PF16360 GTP-binding GTPase Middle Region CU648_23960 PF13167 GTP-binding GTPase N-terminal CU648_23965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_23970 PF07690 Major Facilitator Superfamily CU648_23975 PF00291 Pyridoxal-phosphate dependent enzyme CU648_23990 PF01943 Polysaccharide biosynthesis protein CU648_23990 PF14667 Polysaccharide biosynthesis C-terminal domain CU648_23995 PF00209 Sodium:neurotransmitter symporter family CU648_24000 PF03422 Carbohydrate binding module (family 6) CU648_24000 PF00457 Glycosyl hydrolases family 11 CU648_24000 PF01522 Polysaccharide deacetylase CU648_24010 PF04239 Protein of unknown function (DUF421) CU648_24035 PF01625 Peptide methionine sulfoxide reductase CU648_24040 PF00394 Multicopper oxidase CU648_24040 PF07732 Multicopper oxidase CU648_24040 PF07731 Multicopper oxidase CU648_24050 PF13426 PAS domain CU648_24050 PF00672 HAMP domain CU648_24050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_24050 PF00512 His Kinase A (phospho-acceptor) domain CU648_24055 PF00072 Response regulator receiver domain CU648_24055 PF00486 Transcriptional regulatory protein, C terminal CU648_24065 PF01063 Amino-transferase class IV CU648_24070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CU648_24070 PF00205 Thiamine pyrophosphate enzyme, central domain CU648_24070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CU648_24075 PF10369 Small subunit of acetolactate synthase CU648_24080 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CU648_24080 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CU648_24085 PF00920 Dehydratase family CU648_24090 PF00291 Pyridoxal-phosphate dependent enzyme CU648_24090 PF00585 C-terminal regulatory domain of Threonine dehydratase CU648_24100 PF09587 Bacterial capsule synthesis protein PGA_cap CU648_24115 PF07690 Major Facilitator Superfamily CU648_24120 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CU648_24130 PF00072 Response regulator receiver domain CU648_24130 PF04397 LytTr DNA-binding domain CU648_24135 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CU648_24135 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CU648_24150 PF01979 Amidohydrolase family CU648_24155 PF04740 LXG domain of WXG superfamily CU648_24155 PF14436 Bacterial EndoU nuclease CU648_24170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_24215 PF13186 Iron-sulfur cluster-binding domain CU648_24215 PF04055 Radical SAM superfamily CU648_24220 PF13302 Acetyltransferase (GNAT) domain CU648_24225 PF00486 Transcriptional regulatory protein, C terminal CU648_24225 PF00072 Response regulator receiver domain CU648_24230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_24230 PF00512 His Kinase A (phospho-acceptor) domain CU648_24240 PF01566 Natural resistance-associated macrophage protein CU648_24275 PF13520 Amino acid permease CU648_24290 PF05791 Bacillus haemolytic enterotoxin (HBL) CU648_24300 PF05791 Bacillus haemolytic enterotoxin (HBL) CU648_24310 PF04198 Putative sugar-binding domain CU648_24315 PF01791 DeoC/LacD family aldolase CU648_24320 PF07662 Na+ dependent nucleoside transporter C-terminus CU648_24320 PF01773 Na+ dependent nucleoside transporter N-terminus CU648_24325 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CU648_24325 PF02885 Glycosyl transferase family, helical bundle domain CU648_24325 PF00591 Glycosyl transferase family, a/b domain CU648_24330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CU648_24335 PF07301 Protein of unknown function (DUF1453) CU648_24340 PF05979 Bacterial protein of unknown function (DUF896) CU648_24360 PF05195 Aminopeptidase P, N-terminal domain CU648_24360 PF00557 Metallopeptidase family M24 CU648_24365 PF07732 Multicopper oxidase CU648_24365 PF07731 Multicopper oxidase CU648_24365 PF00394 Multicopper oxidase CU648_24370 PF01551 Peptidase family M23 CU648_24405 PF07690 Major Facilitator Superfamily CU648_24415 PF02525 Flavodoxin-like fold CU648_24420 PF05525 Branched-chain amino acid transport protein CU648_24430 PF05425 Copper resistance protein D CU648_24430 PF04234 CopC domain CU648_24430 PF13115 YtkA-like CU648_24435 PF07987 Domain of unkown function (DUF1775) CU648_24445 PF00892 EamA-like transporter family CU648_24450 PF03466 LysR substrate binding domain CU648_24450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_24455 PF02082 Transcriptional regulator CU648_24460 PF01323 DSBA-like thioredoxin domain CU648_24465 PF00881 Nitroreductase family CU648_24475 PF01425 Amidase CU648_24480 PF01594 AI-2E family transporter CU648_24485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CU648_24485 PF00056 lactate/malate dehydrogenase, NAD binding domain CU648_24490 PF01593 Flavin containing amine oxidoreductase CU648_24495 PF02492 CobW/HypB/UreG, nucleotide-binding domain CU648_24495 PF07683 Cobalamin synthesis protein cobW C-terminal domain CU648_24510 PF13193 AMP-binding enzyme C-terminal domain CU648_24510 PF00501 AMP-binding enzyme CU648_24515 PF01575 MaoC like domain CU648_24520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CU648_24520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CU648_24535 PF00005 ABC transporter CU648_24535 PF12399 Branched-chain amino acid ATP-binding cassette transporter CU648_24540 PF00005 ABC transporter CU648_24545 PF02653 Branched-chain amino acid transport system / permease component CU648_24555 PF03466 LysR substrate binding domain CU648_24555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_24565 PF14552 Tautomerase enzyme CU648_24575 PF01047 MarR family CU648_24585 PF01654 Cytochrome bd terminal oxidase subunit I CU648_24590 PF02322 Cytochrome bd terminal oxidase subunit II CU648_24595 PF00005 ABC transporter CU648_24595 PF00664 ABC transporter transmembrane region CU648_24600 PF00664 ABC transporter transmembrane region CU648_24600 PF00005 ABC transporter CU648_24620 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_24620 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_24635 PF00877 NlpC/P60 family CU648_24635 PF01476 LysM domain CU648_24645 PF00664 ABC transporter transmembrane region CU648_24645 PF00005 ABC transporter CU648_24650 PF00486 Transcriptional regulatory protein, C terminal CU648_24650 PF00072 Response regulator receiver domain CU648_24655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_24655 PF16736 Single Cache-like CU648_24655 PF00989 PAS fold CU648_24655 PF00512 His Kinase A (phospho-acceptor) domain CU648_24665 PF00106 short chain dehydrogenase CU648_24675 PF04439 Streptomycin adenylyltransferase CU648_24680 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CU648_24680 PF01522 Polysaccharide deacetylase CU648_24685 PF13630 SdpI/YhfL protein family CU648_24705 PF00742 Homoserine dehydrogenase CU648_24705 PF01842 ACT domain CU648_24705 PF03447 Homoserine dehydrogenase, NAD binding domain CU648_24710 PF00291 Pyridoxal-phosphate dependent enzyme CU648_24715 PF00288 GHMP kinases N terminal domain CU648_24715 PF08544 GHMP kinases C terminal CU648_24730 PF03816 Cell envelope-related transcriptional attenuator domain CU648_24740 PF00486 Transcriptional regulatory protein, C terminal CU648_24740 PF00072 Response regulator receiver domain CU648_24745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_24745 PF00512 His Kinase A (phospho-acceptor) domain CU648_24745 PF00989 PAS fold CU648_24745 PF16736 Single Cache-like CU648_24750 PF01522 Polysaccharide deacetylase CU648_24760 PF02308 MgtC family CU648_24765 PF00583 Acetyltransferase (GNAT) family CU648_24770 PF04183 IucA / IucC family CU648_24770 PF06276 Ferric iron reductase FhuF-like transporter CU648_24775 PF04183 IucA / IucC family CU648_24775 PF06276 Ferric iron reductase FhuF-like transporter CU648_24780 PF00501 AMP-binding enzyme CU648_24780 PF13193 AMP-binding enzyme C-terminal domain CU648_24795 PF01261 Xylose isomerase-like TIM barrel CU648_24800 PF00269 Small, acid-soluble spore proteins, alpha/beta type CU648_24805 PF07690 Major Facilitator Superfamily CU648_24810 PF01810 LysE type translocator CU648_24825 PF01734 Patatin-like phospholipase CU648_24850 PF13344 Haloacid dehalogenase-like hydrolase CU648_24850 PF00293 NUDIX domain CU648_24855 PF02540 NAD synthase CU648_24860 PF02687 FtsX-like permease family CU648_24865 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CU648_24865 PF18277 AbrB C-terminal domain CU648_24870 PF00082 Subtilase family CU648_24875 PF01022 Bacterial regulatory protein, arsR family CU648_24880 PF00248 Aldo/keto reductase family CU648_24885 PF07690 Major Facilitator Superfamily CU648_24905 PF03193 RsgA GTPase CU648_24910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CU648_24910 PF00672 HAMP domain CU648_24910 PF02743 Cache domain CU648_24935 PF00210 Ferritin-like domain CU648_24950 PF00296 Luciferase-like monooxygenase CU648_24960 PF01593 Flavin containing amine oxidoreductase CU648_24970 PF00248 Aldo/keto reductase family CU648_24975 PF07683 Cobalamin synthesis protein cobW C-terminal domain CU648_24975 PF02492 CobW/HypB/UreG, nucleotide-binding domain CU648_24980 PF00583 Acetyltransferase (GNAT) family CU648_24990 PF14436 Bacterial EndoU nuclease CU648_24990 PF04740 LXG domain of WXG superfamily CU648_24995 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CU648_24995 PF01297 Zinc-uptake complex component A periplasmic CU648_25005 PF13460 NAD(P)H-binding CU648_25010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CU648_25015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CU648_25015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CU648_25025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CU648_25030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_25040 PF00300 Histidine phosphatase superfamily (branch 1) CU648_25050 PF08757 CotH kinase protein CU648_25055 PF00293 NUDIX domain CU648_25060 PF09335 SNARE associated Golgi protein CU648_25065 PF14667 Polysaccharide biosynthesis C-terminal domain CU648_25065 PF01943 Polysaccharide biosynthesis protein CU648_25075 PF03773 Predicted permease CU648_25080 PF09323 Domain of unknown function (DUF1980) CU648_25085 PF03061 Thioesterase superfamily CU648_25095 PF13091 PLD-like domain CU648_25095 PF13396 Phospholipase_D-nuclease N-terminal CU648_25110 PF13460 NAD(P)H-binding CU648_25115 PF04306 Protein of unknown function (DUF456) CU648_25120 PF01595 Cyclin M transmembrane N-terminal domain CU648_25120 PF00571 CBS domain CU648_25120 PF03471 Transporter associated domain CU648_25135 PF05525 Branched-chain amino acid transport protein CU648_25140 PF01588 Putative tRNA binding domain CU648_25160 PF07454 Stage II sporulation protein P (SpoIIP) CU648_25170 PF02557 D-alanyl-D-alanine carboxypeptidase CU648_25180 PF01425 Amidase CU648_25185 PF07690 Major Facilitator Superfamily CU648_25195 PF01145 SPFH domain / Band 7 family CU648_25200 PF00300 Histidine phosphatase superfamily (branch 1) CU648_25215 PF01168 Alanine racemase, N-terminal domain CU648_25215 PF00842 Alanine racemase, C-terminal domain CU648_25220 PF01209 ubiE/COQ5 methyltransferase family CU648_25235 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CU648_25240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CU648_25240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CU648_25245 PF00392 Bacterial regulatory proteins, gntR family CU648_25245 PF00155 Aminotransferase class I and II CU648_25275 PF00583 Acetyltransferase (GNAT) family CU648_25310 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CU648_25335 PF01209 ubiE/COQ5 methyltransferase family CU648_25340 PF01268 Formate--tetrahydrofolate ligase CU648_25350 PF00270 DEAD/DEAH box helicase CU648_25350 PF00271 Helicase conserved C-terminal domain CU648_25355 PF01261 Xylose isomerase-like TIM barrel CU648_25360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CU648_25370 PF00107 Zinc-binding dehydrogenase CU648_25370 PF08240 Alcohol dehydrogenase GroES-like domain CU648_25375 PF08281 Sigma-70, region 4 CU648_25375 PF04542 Sigma-70 region 2 CU648_25410 PF00255 Glutathione peroxidase CU648_25415 PF11992 Domain of unknown function (DUF3488) CU648_25415 PF13559 Domain of unknown function (DUF4129) CU648_25415 PF01841 Transglutaminase-like superfamily CU648_25420 PF01882 Protein of unknown function DUF58 CU648_25425 PF07726 ATPase family associated with various cellular activities (AAA) CU648_25425 PF17863 AAA lid domain CU648_25440 PF00384 Molybdopterin oxidoreductase CU648_25440 PF14710 Respiratory nitrate reductase alpha N-terminal CU648_25440 PF01568 Molydopterin dinucleotide binding domain CU648_25445 PF13247 4Fe-4S dicluster domain CU648_25445 PF14711 Respiratory nitrate reductase beta C-terminal CU648_25450 PF02613 Nitrate reductase delta subunit CU648_25455 PF02665 Nitrate reductase gamma subunit CU648_25460 PF00027 Cyclic nucleotide-binding domain CU648_25460 PF00325 Bacterial regulatory proteins, crp family CU648_25465 PF04055 Radical SAM superfamily CU648_25465 PF06463 Molybdenum Cofactor Synthesis C CU648_25470 PF00899 ThiF family CU648_25475 PF03453 MoeA N-terminal region (domain I and II) CU648_25475 PF03454 MoeA C-terminal region (domain IV) CU648_25475 PF00994 Probable molybdopterin binding domain CU648_25480 PF02391 MoaE protein CU648_25490 PF07690 Major Facilitator Superfamily CU648_25505 PF01903 CbiX CU648_25510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CU648_25515 PF00355 Rieske [2Fe-2S] domain CU648_25520 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_25520 PF18267 Rubredoxin NAD+ reductase C-terminal domain CU648_25520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CU648_25520 PF04324 BFD-like [2Fe-2S] binding domain CU648_25520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CU648_25525 PF04405 Domain of Unknown function (DUF542) CU648_25525 PF01814 Hemerythrin HHE cation binding domain CU648_25550 PF04232 Stage V sporulation protein S (SpoVS) CU648_25595 PF01966 HD domain CU648_25600 PF00005 ABC transporter CU648_25600 PF12848 ABC transporter CU648_25600 PF16326 ABC transporter C-terminal domain CU648_25615 PF00436 Single-strand binding protein family CU648_25620 PF13769 Virulence factor CU648_25620 PF08712 Scaffold protein Nfu/NifU N terminal CU648_25630 PF06491 Disulphide isomerase CU648_25635 PF04445 Putative SAM-dependent methyltransferase CU648_25640 PF03485 Arginyl tRNA synthetase N terminal domain CU648_25640 PF00750 tRNA synthetases class I (R) CU648_25640 PF05746 DALR anticodon binding domain CU648_25655 PF00133 tRNA synthetases class I (I, L, M and V) CU648_25655 PF08264 Anticodon-binding domain of tRNA CU648_25675 PF02875 Mur ligase family, glutamate ligase domain CU648_25675 PF08245 Mur ligase middle domain CU648_25675 PF01225 Mur ligase family, catalytic domain CU648_25685 PF01336 OB-fold nucleic acid binding domain CU648_25685 PF00152 tRNA synthetases class II (D, K and N) CU648_25705 PF12538 DNA transporter CU648_25705 PF01580 FtsK/SpoIIIE family CU648_25760 PF02595 Glycerate kinase family CU648_25765 PF00939 Sodium:sulfate symporter transmembrane region CU648_25770 PF00072 Response regulator receiver domain CU648_25770 PF00486 Transcriptional regulatory protein, C terminal CU648_25775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_25775 PF00672 HAMP domain CU648_25775 PF00512 His Kinase A (phospho-acceptor) domain CU648_25790 PF00209 Sodium:neurotransmitter symporter family CU648_25805 PF10997 Alternate to MurJ CU648_25810 PF13419 Haloacid dehalogenase-like hydrolase CU648_25820 PF00465 Iron-containing alcohol dehydrogenase CU648_25825 PF01177 Asp/Glu/Hydantoin racemase CU648_25830 PF01980 tRNA-methyltransferase O CU648_25835 PF00583 Acetyltransferase (GNAT) family CU648_25850 PF00005 ABC transporter CU648_25855 PF05975 Bacterial ABC transporter protein EcsB CU648_25860 PF14005 YpjP-like protein CU648_25865 PF13419 Haloacid dehalogenase-like hydrolase CU648_25885 PF00144 Beta-lactamase CU648_25885 PF07930 D-aminopeptidase, domain B CU648_25895 PF00303 Thymidylate synthase CU648_25900 PF00186 Dihydrofolate reductase CU648_25905 PF03717 Penicillin-binding Protein dimerisation domain CU648_25905 PF05223 NTF2-like N-terminal transpeptidase domain CU648_25905 PF00905 Penicillin binding protein transpeptidase domain CU648_25910 PF02525 Flavodoxin-like fold CU648_25915 PF01553 Acyltransferase CU648_25920 PF03006 Haemolysin-III related CU648_25925 PF02416 mttA/Hcf106 family CU648_25930 PF00902 Sec-independent protein translocase protein (TatC) CU648_25945 PF02645 Uncharacterised protein, DegV family COG1307 CU648_25955 PF02630 SCO1/SenC CU648_25960 PF00011 Hsp20/alpha crystallin family CU648_25965 PF13537 Glutamine amidotransferase domain CU648_25965 PF00733 Asparagine synthase CU648_25990 PF01497 Periplasmic binding protein CU648_25995 PF01063 Amino-transferase class IV CU648_26000 PF00881 Nitroreductase family CU648_26015 PF00857 Isochorismatase family CU648_26020 PF00293 NUDIX domain CU648_26025 PF00011 Hsp20/alpha crystallin family CU648_26030 PF00924 Mechanosensitive ion channel CU648_26035 PF13185 GAF domain CU648_26035 PF07730 Histidine kinase CU648_26040 PF00072 Response regulator receiver domain CU648_26040 PF00196 Bacterial regulatory proteins, luxR family CU648_26050 PF08240 Alcohol dehydrogenase GroES-like domain CU648_26050 PF00107 Zinc-binding dehydrogenase CU648_26065 PF00144 Beta-lactamase CU648_26075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CU648_26075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CU648_26080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CU648_26080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CU648_26095 PF03358 NADPH-dependent FMN reductase CU648_26110 PF00005 ABC transporter CU648_26110 PF00571 CBS domain CU648_26115 PF00528 Binding-protein-dependent transport system inner membrane component CU648_26120 PF13520 Amino acid permease CU648_26150 PF03471 Transporter associated domain CU648_26150 PF01595 Cyclin M transmembrane N-terminal domain CU648_26150 PF00571 CBS domain CU648_26155 PF00171 Aldehyde dehydrogenase family CU648_26160 PF07997 Protein of unknown function (DUF1694) CU648_26165 PF09385 Histidine kinase N terminal CU648_26180 PF00202 Aminotransferase class-III CU648_26185 PF01144 Coenzyme A transferase CU648_26190 PF01144 Coenzyme A transferase CU648_26195 PF07687 Peptidase dimerisation domain CU648_26195 PF01546 Peptidase family M20/M25/M40 CU648_26200 PF00583 Acetyltransferase (GNAT) family CU648_26205 PF02954 Bacterial regulatory protein, Fis family CU648_26205 PF13426 PAS domain CU648_26205 PF00158 Sigma-54 interaction domain CU648_26215 PF12544 Lysine-2,3-aminomutase CU648_26220 PF14122 YokU-like protein, putative antitoxin CU648_26225 PF06855 YozE SAM-like fold CU648_26240 PF14162 YozD-like protein CU648_26255 PF07070 SpoOM protein CU648_26260 PF01569 PAP2 superfamily CU648_26265 PF16916 Dimerisation domain of Zinc Transporter CU648_26265 PF01545 Cation efflux family CU648_26270 PF00085 Thioredoxin CU648_26370 PF10676 Spore germination protein gerPA/gerPF CU648_26385 PF00106 short chain dehydrogenase CU648_26405 PF00912 Transglycosylase CU648_26405 PF00905 Penicillin binding protein transpeptidase domain CU648_26410 PF07690 Major Facilitator Superfamily CU648_26415 PF01521 Iron-sulphur cluster biosynthesis CU648_26420 PF00285 Citrate synthase, C-terminal domain CU648_26425 PF03972 MmgE/PrpD family CU648_26435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CU648_26435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CU648_26435 PF02770 Acyl-CoA dehydrogenase, middle domain CU648_26440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CU648_26440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CU648_26445 PF00171 Aldehyde dehydrogenase family CU648_26450 PF01810 LysE type translocator CU648_26455 PF00378 Enoyl-CoA hydratase/isomerase CU648_26465 PF10763 Protein of unknown function (DUF2584) CU648_26470 PF12320 Type 5 capsule protein repressor C-terminal domain CU648_26470 PF00149 Calcineurin-like phosphoesterase CU648_26475 PF13476 AAA domain CU648_26485 PF01022 Bacterial regulatory protein, arsR family CU648_26505 PF07690 Major Facilitator Superfamily CU648_26515 PF00106 short chain dehydrogenase CU648_26520 PF00425 chorismate binding enzyme CU648_26525 PF13193 AMP-binding enzyme C-terminal domain CU648_26525 PF00501 AMP-binding enzyme CU648_26530 PF00550 Phosphopantetheine attachment site CU648_26530 PF00857 Isochorismatase family CU648_26535 PF00550 Phosphopantetheine attachment site CU648_26535 PF00501 AMP-binding enzyme CU648_26535 PF13193 AMP-binding enzyme C-terminal domain CU648_26535 PF00975 Thioesterase domain CU648_26535 PF00668 Condensation domain CU648_26540 PF03621 MbtH-like protein CU648_26545 PF07690 Major Facilitator Superfamily CU648_26560 PF00216 Bacterial DNA-binding protein CU648_26570 PF05163 DinB family CU648_26575 PF00082 Subtilase family CU648_26580 PF01235 Sodium:alanine symporter family CU648_26595 PF16291 Domain of unknown function (DUF4937 CU648_26600 PF00849 RNA pseudouridylate synthase CU648_26600 PF01479 S4 domain CU648_26605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CU648_26605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CU648_26605 PF02824 TGS domain CU648_26605 PF03129 Anticodon binding domain CU648_26610 PF00005 ABC transporter CU648_26625 PF12146 Serine aminopeptidase, S33 CU648_26630 PF07690 Major Facilitator Superfamily CU648_26650 PF13649 Methyltransferase domain CU648_26685 PF00753 Metallo-beta-lactamase superfamily CU648_26685 PF16123 Hydroxyacylglutathione hydrolase C-terminus CU648_26695 PF03176 MMPL family CU648_26705 PF00302 Chloramphenicol acetyltransferase CU648_26720 PF00583 Acetyltransferase (GNAT) family CU648_26730 PF01022 Bacterial regulatory protein, arsR family CU648_26735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CU648_26750 PF17770 Ribonuclease J C-terminal domain CU648_26750 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CU648_26750 PF00753 Metallo-beta-lactamase superfamily CU648_26755 PF00582 Universal stress protein family CU648_26760 PF00916 Sulfate permease family CU648_26760 PF01740 STAS domain CU648_26765 PF02796 Helix-turn-helix domain of resolvase CU648_26765 PF00239 Resolvase, N terminal domain CU648_26770 PF03551 Transcriptional regulator PadR-like family CU648_26780 PF01022 Bacterial regulatory protein, arsR family CU648_26785 PF01758 Sodium Bile acid symporter family CU648_26790 PF01451 Low molecular weight phosphotyrosine protein phosphatase CU648_26795 PF06953 Arsenical resistance operon trans-acting repressor ArsD CU648_26800 PF02374 Anion-transporting ATPase CU648_26815 PF08721 TnsA endonuclease C terminal CU648_26815 PF08722 TnsA endonuclease N terminal CU648_26820 PF00665 Integrase core domain CU648_26825 PF13401 AAA domain CU648_26825 PF11426 Tn7 transposition regulator TnsC CU648_26865 PF08241 Methyltransferase domain CU648_26870 PF13302 Acetyltransferase (GNAT) domain CU648_26880 PF00313 'Cold-shock' DNA-binding domain CU648_26905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_26905 PF03466 LysR substrate binding domain CU648_26910 PF01118 Semialdehyde dehydrogenase, NAD binding domain CU648_26910 PF02774 Semialdehyde dehydrogenase, dimerisation domain CU648_26925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CU648_26925 PF03466 LysR substrate binding domain CU648_26930 PF03473 MOSC domain CU648_26930 PF03475 3-alpha domain CU648_26945 PF00664 ABC transporter transmembrane region CU648_26945 PF00005 ABC transporter CU648_26950 PF00664 ABC transporter transmembrane region CU648_26950 PF00005 ABC transporter CU648_26965 PF01810 LysE type translocator CU648_26970 PF07883 Cupin domain CU648_26970 PF01381 Helix-turn-helix CU648_27000 PF13291 ACT domain CU648_27000 PF04607 Region found in RelA / SpoT proteins CU648_27000 PF02824 TGS domain CU648_27010 PF00890 FAD binding domain CU648_27015 PF08281 Sigma-70, region 4 CU648_27015 PF04542 Sigma-70 region 2 CU648_27015 PF12680 SnoaL-like domain CU648_27045 PF02638 Glycosyl hydrolase-like 10 CU648_27060 PF02378 Phosphotransferase system, EIIC CU648_27070 PF03702 Anhydro-N-acetylmuramic acid kinase CU648_27075 PF01869 BadF/BadG/BcrA/BcrD ATPase family CU648_27080 PF02660 Glycerol-3-phosphate acyltransferase CU648_27085 PF00266 Aminotransferase class-V CU648_27090 PF00145 C-5 cytosine-specific DNA methylase CU648_27110 PF00291 Pyridoxal-phosphate dependent enzyme CU648_27150 PF16123 Hydroxyacylglutathione hydrolase C-terminus CU648_27150 PF00753 Metallo-beta-lactamase superfamily CU648_27165 PF00271 Helicase conserved C-terminal domain CU648_27165 PF00270 DEAD/DEAH box helicase CU648_27180 PF17932 Tetracyclin repressor-like, C-terminal domain CU648_27180 PF00440 Bacterial regulatory proteins, tetR family CU648_27195 PF00005 ABC transporter CU648_27195 PF02687 FtsX-like permease family CU648_27195 PF12704 MacB-like periplasmic core domain CU648_27200 PF09313 Domain of unknown function (DUF1971) CU648_27200 PF03848 Tellurite resistance protein TehB CU648_27210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CU648_27210 PF00205 Thiamine pyrophosphate enzyme, central domain CU648_27210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CU648_27215 PF12802 MarR family CU648_27220 PF00300 Histidine phosphatase superfamily (branch 1) CU648_27230 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CU648_27250 PF07687 Peptidase dimerisation domain CU648_27250 PF01546 Peptidase family M20/M25/M40 CU648_27265 PF08281 Sigma-70, region 4 CU648_27265 PF04542 Sigma-70 region 2 CU648_27275 PF00905 Penicillin binding protein transpeptidase domain CU648_27275 PF03717 Penicillin-binding Protein dimerisation domain CU648_27290 PF00149 Calcineurin-like phosphoesterase CU648_27325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CU648_27325 PF02770 Acyl-CoA dehydrogenase, middle domain CU648_27325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CU648_27330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CU648_27330 PF02785 Biotin carboxylase C-terminal domain CU648_27330 PF00289 Biotin carboxylase, N-terminal domain CU648_27335 PF00364 Biotin-requiring enzyme CU648_27340 PF00682 HMGL-like CU648_27345 PF00378 Enoyl-CoA hydratase/isomerase CU648_27350 PF01039 Carboxyl transferase domain CU648_27355 PF13193 AMP-binding enzyme C-terminal domain CU648_27355 PF00501 AMP-binding enzyme CU648_27355 PF16177 Acetyl-coenzyme A synthetase N-terminus CU648_27365 PF00583 Acetyltransferase (GNAT) family CU648_27370 PF00485 Phosphoribulokinase / Uridine kinase family CU648_27375 PF05163 DinB family CU648_27380 PF00768 D-alanyl-D-alanine carboxypeptidase CU648_27380 PF07943 Penicillin-binding protein 5, C-terminal domain CU648_27385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_27385 PF00512 His Kinase A (phospho-acceptor) domain CU648_27390 PF00486 Transcriptional regulatory protein, C terminal CU648_27390 PF00072 Response regulator receiver domain CU648_27395 PF01966 HD domain CU648_27400 PF13021 Domain of unknown function (DUF3885) CU648_27405 PF01048 Phosphorylase superfamily CU648_27425 PF03413 Peptidase propeptide and YPEB domain CU648_27425 PF01447 Thermolysin metallopeptidase, catalytic domain CU648_27425 PF02868 Thermolysin metallopeptidase, alpha-helical domain CU648_27425 PF07504 Fungalysin/Thermolysin Propeptide Motif CU648_27445 PF17760 UvrA interaction domain CU648_27445 PF17755 UvrA DNA-binding domain CU648_27445 PF17755 UvrA DNA-binding domain CU648_27445 PF17760 UvrA interaction domain CU648_27460 PF00144 Beta-lactamase CU648_27465 PF00376 MerR family regulatory protein CU648_27465 PF09278 MerR, DNA binding CU648_27470 PF07690 Major Facilitator Superfamily CU648_27490 PF01636 Phosphotransferase enzyme family CU648_27495 PF12833 Helix-turn-helix domain CU648_27510 PF00155 Aminotransferase class I and II CU648_27510 PF00392 Bacterial regulatory proteins, gntR family CU648_27530 PF00107 Zinc-binding dehydrogenase CU648_27530 PF08240 Alcohol dehydrogenase GroES-like domain CU648_27555 PF08245 Mur ligase middle domain CU648_27555 PF02875 Mur ligase family, glutamate ligase domain CU648_27555 PF01225 Mur ligase family, catalytic domain CU648_27570 PF07486 Cell Wall Hydrolase CU648_27580 PF00486 Transcriptional regulatory protein, C terminal CU648_27580 PF00072 Response regulator receiver domain CU648_27585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_27605 PF00005 ABC transporter CU648_27610 PF02687 FtsX-like permease family CU648_27630 PF01842 ACT domain CU648_27630 PF00742 Homoserine dehydrogenase CU648_27630 PF03447 Homoserine dehydrogenase, NAD binding domain CU648_27635 PF00155 Aminotransferase class I and II CU648_27635 PF00392 Bacterial regulatory proteins, gntR family CU648_27640 PF07478 D-ala D-ala ligase C-terminus CU648_27640 PF01820 D-ala D-ala ligase N-terminus CU648_27645 PF03070 TENA/THI-4/PQQC family CU648_27745 PF00067 Cytochrome P450 CU648_27755 PF00132 Bacterial transferase hexapeptide (six repeats) CU648_27760 PF07561 Domain of Unknown Function (DUF1540) CU648_27770 PF00067 Cytochrome P450 CU648_27785 PF07690 Major Facilitator Superfamily CU648_27815 PF13188 PAS domain CU648_27815 PF13426 PAS domain CU648_27815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_27815 PF00512 His Kinase A (phospho-acceptor) domain CU648_27815 PF00989 PAS fold CU648_27825 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CU648_27830 PF01177 Asp/Glu/Hydantoin racemase CU648_27835 PF07155 ECF-type riboflavin transporter, S component CU648_27840 PF12558 ATP-binding cassette cobalt transporter CU648_27840 PF00005 ABC transporter CU648_27855 PF00512 His Kinase A (phospho-acceptor) domain CU648_27855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CU648_27865 PF04229 GrpB protein CU648_27870 PF00107 Zinc-binding dehydrogenase CU648_27870 PF08240 Alcohol dehydrogenase GroES-like domain CU648_27875 PF01569 PAP2 superfamily CU648_27895 PF00144 Beta-lactamase CU648_27895 PF11954 Domain of unknown function (DUF3471) CU648_27920 PF02796 Helix-turn-helix domain of resolvase CU648_27920 PF00239 Resolvase, N terminal domain CU648_27930 PF01965 DJ-1/PfpI family CU648_27945 PF00144 Beta-lactamase CU648_27960 PF07690 Major Facilitator Superfamily CU648_27980 PF03009 Glycerophosphoryl diester phosphodiesterase family CU648_28000 PF00155 Aminotransferase class I and II CU648_28000 PF00392 Bacterial regulatory proteins, gntR family CU648_28005 PF00892 EamA-like transporter family CU648_28015 PF00293 NUDIX domain CU648_28035 PF07690 Major Facilitator Superfamily CU648_28040 PF00293 NUDIX domain CU648_28040 PF09297 NADH pyrophosphatase zinc ribbon domain CU648_28045 PF02768 DNA polymerase III beta subunit, C-terminal domain CU648_28045 PF00712 DNA polymerase III beta subunit, N-terminal domain CU648_28045 PF02767 DNA polymerase III beta subunit, central domain CU648_28050 PF00293 NUDIX domain CU648_28050 PF09297 NADH pyrophosphatase zinc ribbon domain CU648_28060 PF12706 Beta-lactamase superfamily domain CU648_28080 PF09234 Domain of unknown function (DUF1963) CU648_28100 PF01734 Patatin-like phospholipase CU648_28105 PF08000 Bacterial PH domain CU648_28115 PF12867 DinB superfamily CU648_28130 PF02673 Bacitracin resistance protein BacA CU648_28140 PF01541 GIY-YIG catalytic domain CU648_28185 PF01266 FAD dependent oxidoreductase CU648_28225 PF01569 PAP2 superfamily CU648_28235 PF00128 Alpha amylase, catalytic domain CU648_28235 PF03714 Bacterial pullanase-associated domain CU648_28235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CU648_28240 PF07504 Fungalysin/Thermolysin Propeptide Motif CU648_28240 PF03413 Peptidase propeptide and YPEB domain CU648_28240 PF01447 Thermolysin metallopeptidase, catalytic domain CU648_28240 PF02868 Thermolysin metallopeptidase, alpha-helical domain CU648_28260 PF00344 SecY translocase CU648_28265 PF11638 DnaA N-terminal domain CU648_28265 PF00308 Bacterial dnaA protein CU648_28265 PF08299 Bacterial dnaA protein helix-turn-helix