locus-tag class description DN407_00005 PF11638 DnaA N-terminal domain DN407_00005 PF00308 Bacterial dnaA protein DN407_00005 PF08299 Bacterial dnaA protein helix-turn-helix DN407_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DN407_00010 PF02767 DNA polymerase III beta subunit, central domain DN407_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DN407_00020 PF02463 RecF/RecN/SMC N terminal domain DN407_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_00025 PF01751 Toprim domain DN407_00025 PF00204 DNA gyrase B DN407_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DN407_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DN407_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DN407_00060 PF14175 YaaC-like Protein DN407_00065 PF00571 CBS domain DN407_00065 PF00478 IMP dehydrogenase / GMP reductase domain DN407_00070 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_00070 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_00075 PF01680 SOR/SNZ family DN407_00080 PF01174 SNO glutamine amidotransferase family DN407_00085 PF02403 Seryl-tRNA synthetase N-terminal domain DN407_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN407_00100 PF01712 Deoxynucleoside kinase DN407_00105 PF01712 Deoxynucleoside kinase DN407_00110 PF00857 Isochorismatase family DN407_00120 PF14437 MafB19-like deaminase DN407_00130 PF12169 DNA polymerase III subunits gamma and tau domain III DN407_00135 PF02575 YbaB/EbfC DNA-binding family DN407_00140 PF13662 Toprim domain DN407_00140 PF02132 RecR protein DN407_00145 PF10704 Protein of unknown function (DUF2508) DN407_00150 PF07441 SigmaK-factor processing regulatory protein BofA DN407_00185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN407_00185 PF01276 Orn/Lys/Arg decarboxylase, major domain DN407_00190 PF02223 Thymidylate kinase DN407_00195 PF09115 DNA polymerase III, delta subunit, C terminal DN407_00200 PF04468 PSP1 C-terminal conserved region DN407_00205 PF06156 Initiation control protein YabA DN407_00210 PF05175 Methyltransferase small domain DN407_00215 PF01541 GIY-YIG catalytic domain DN407_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN407_00225 PF18277 AbrB C-terminal domain DN407_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN407_00230 PF01588 Putative tRNA binding domain DN407_00230 PF09334 tRNA synthetases class I (M) DN407_00230 PF08264 Anticodon-binding domain of tRNA DN407_00235 PF01026 TatD related DNase DN407_00240 PF13331 Domain of unknown function (DUF4093) DN407_00240 PF13662 Toprim domain DN407_00245 PF00398 Ribosomal RNA adenine dimethylase DN407_00250 PF05582 YabG peptidase U57 DN407_00255 PF06257 Biofilm formation stimulator VEG DN407_00260 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_00265 PF00288 GHMP kinases N terminal domain DN407_00265 PF08544 GHMP kinases C terminal DN407_00270 PF00156 Phosphoribosyl transferase domain DN407_00270 PF09182 Bacterial purine repressor, N-terminal DN407_00275 PF01042 Endoribonuclease L-PSP DN407_00280 PF04026 SpoVG DN407_00285 PF00483 Nucleotidyl transferase DN407_00285 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_00290 PF14572 Phosphoribosyl synthetase-associated domain DN407_00290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN407_00295 PF01195 Peptidyl-tRNA hydrolase DN407_00305 PF00271 Helicase conserved C-terminal domain DN407_00305 PF02559 CarD-like/TRCF domain DN407_00305 PF03461 TRCF domain DN407_00305 PF17757 UvrB interaction domain DN407_00305 PF00270 DEAD/DEAH box helicase DN407_00310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN407_00310 PF15714 Stage V sporulation protein T C-terminal, transcription factor DN407_00315 PF14667 Polysaccharide biosynthesis C-terminal domain DN407_00315 PF01943 Polysaccharide biosynthesis protein DN407_00320 PF03819 MazG nucleotide pyrophosphohydrolase domain DN407_00320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN407_00325 PF01479 S4 domain DN407_00330 PF07873 YabP family DN407_00335 PF09578 Spore cortex protein YabQ (Spore_YabQ) DN407_00345 PF00575 S1 RNA binding domain DN407_00360 PF07228 Stage II sporulation protein E (SpoIIE) DN407_00365 PF11734 TilS substrate C-terminal domain DN407_00365 PF09179 TilS substrate binding domain DN407_00365 PF01171 PP-loop family DN407_00375 PF00004 ATPase family associated with various cellular activities (AAA) DN407_00375 PF17862 AAA+ lid domain DN407_00375 PF01434 Peptidase family M41 DN407_00375 PF06480 FtsH Extracellular DN407_00380 PF03309 Type III pantothenate kinase DN407_00385 PF01430 Hsp33 protein DN407_00390 PF00291 Pyridoxal-phosphate dependent enzyme DN407_00395 PF04715 Anthranilate synthase component I, N terminal region DN407_00395 PF00425 chorismate binding enzyme DN407_00400 PF00117 Glutamine amidotransferase class-I DN407_00405 PF01063 Amino-transferase class IV DN407_00410 PF00809 Pterin binding enzyme DN407_00415 PF02152 Dihydroneopterin aldolase DN407_00420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DN407_00425 PF01381 Helix-turn-helix DN407_00430 PF01207 Dihydrouridine synthase (Dus) DN407_00435 PF00152 tRNA synthetases class II (D, K and N) DN407_00435 PF01336 OB-fold nucleic acid binding domain DN407_00515 PF05848 CtsR N-terminal HTH domain DN407_00515 PF17727 CtsR C-terminal dimerization domain DN407_00520 PF02151 UvrB/uvrC motif DN407_00525 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DN407_00530 PF00004 ATPase family associated with various cellular activities (AAA) DN407_00530 PF10431 C-terminal, D2-small domain, of ClpB protein DN407_00530 PF02861 Clp amino terminal domain, pathogenicity island component DN407_00530 PF17871 AAA lid domain DN407_00530 PF07724 AAA domain (Cdc48 subfamily) DN407_00535 PF18073 Rubredoxin metal binding domain DN407_00540 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN407_00540 PF10635 DisA bacterial checkpoint controller linker region DN407_00550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN407_00555 PF02542 YgbB family DN407_00560 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN407_00565 PF06426 Serine acetyltransferase, N-terminal DN407_00565 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_00570 PF01406 tRNA synthetases class I (C) catalytic domain DN407_00570 PF09190 DALR domain DN407_00575 PF00636 Ribonuclease III domain DN407_00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN407_00580 PF00588 SpoU rRNA Methylase family DN407_00585 PF05991 YacP-like NYN domain DN407_00590 PF08281 Sigma-70, region 4 DN407_00590 PF04542 Sigma-70 region 2 DN407_00595 PF00471 Ribosomal protein L33 DN407_00600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DN407_00605 PF02357 Transcription termination factor nusG DN407_00605 PF00467 KOW motif DN407_00610 PF03946 Ribosomal protein L11, N-terminal domain DN407_00610 PF00298 Ribosomal protein L11, RNA binding domain DN407_00615 PF00687 Ribosomal protein L1p/L10e family DN407_00620 PF00466 Ribosomal protein L10 DN407_00625 PF00542 Ribosomal protein L7/L12 C-terminal domain DN407_00625 PF16320 Ribosomal protein L7/L12 dimerisation domain DN407_00630 PF05175 Methyltransferase small domain DN407_00635 PF04560 RNA polymerase Rpb2, domain 7 DN407_00635 PF10385 RNA polymerase beta subunit external 1 domain DN407_00635 PF04565 RNA polymerase Rpb2, domain 3 DN407_00635 PF04561 RNA polymerase Rpb2, domain 2 DN407_00635 PF04563 RNA polymerase beta subunit DN407_00635 PF00562 RNA polymerase Rpb2, domain 6 DN407_00640 PF04983 RNA polymerase Rpb1, domain 3 DN407_00640 PF04998 RNA polymerase Rpb1, domain 5 DN407_00640 PF04997 RNA polymerase Rpb1, domain 1 DN407_00640 PF00623 RNA polymerase Rpb1, domain 2 DN407_00640 PF05000 RNA polymerase Rpb1, domain 4 DN407_00645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN407_00650 PF00164 Ribosomal protein S12/S23 DN407_00655 PF00177 Ribosomal protein S7p/S5e DN407_00660 PF03764 Elongation factor G, domain IV DN407_00660 PF00009 Elongation factor Tu GTP binding domain DN407_00660 PF00679 Elongation factor G C-terminus DN407_00660 PF03144 Elongation factor Tu domain 2 DN407_00660 PF14492 Elongation Factor G, domain II DN407_00665 PF03143 Elongation factor Tu C-terminal domain DN407_00665 PF03144 Elongation factor Tu domain 2 DN407_00665 PF00009 Elongation factor Tu GTP binding domain DN407_00675 PF00338 Ribosomal protein S10p/S20e DN407_00680 PF00297 Ribosomal protein L3 DN407_00685 PF00573 Ribosomal protein L4/L1 family DN407_00690 PF00276 Ribosomal protein L23 DN407_00695 PF00181 Ribosomal Proteins L2, RNA binding domain DN407_00695 PF03947 Ribosomal Proteins L2, C-terminal domain DN407_00700 PF00203 Ribosomal protein S19 DN407_00705 PF00237 Ribosomal protein L22p/L17e DN407_00710 PF00189 Ribosomal protein S3, C-terminal domain DN407_00710 PF07650 KH domain DN407_00715 PF00252 Ribosomal protein L16p/L10e DN407_00720 PF00831 Ribosomal L29 protein DN407_00725 PF00366 Ribosomal protein S17 DN407_00730 PF00238 Ribosomal protein L14p/L23e DN407_00735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DN407_00735 PF00467 KOW motif DN407_00740 PF00281 Ribosomal protein L5 DN407_00740 PF00673 ribosomal L5P family C-terminus DN407_00745 PF00253 Ribosomal protein S14p/S29e DN407_00750 PF00410 Ribosomal protein S8 DN407_00755 PF00347 Ribosomal protein L6 DN407_00760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DN407_00765 PF03719 Ribosomal protein S5, C-terminal domain DN407_00765 PF00333 Ribosomal protein S5, N-terminal domain DN407_00770 PF00327 Ribosomal protein L30p/L7e DN407_00775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DN407_00780 PF00344 SecY translocase DN407_00785 PF05191 Adenylate kinase, active site lid DN407_00790 PF00557 Metallopeptidase family M24 DN407_00795 PF01176 Translation initiation factor 1A / IF-1 DN407_00800 PF00444 Ribosomal protein L36 DN407_00805 PF00416 Ribosomal protein S13/S18 DN407_00810 PF00411 Ribosomal protein S11 DN407_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN407_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain DN407_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN407_00820 PF01196 Ribosomal protein L17 DN407_00825 PF00005 ABC transporter DN407_00830 PF00005 ABC transporter DN407_00835 PF02361 Cobalt transport protein DN407_00840 PF01416 tRNA pseudouridine synthase DN407_00845 PF00572 Ribosomal protein L13 DN407_00850 PF00380 Ribosomal protein S9/S16 DN407_00860 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_00865 PF10609 NUBPL iron-transfer P-loop NTPase DN407_00870 PF17898 Spore germination GerD central core domain DN407_00875 PF14089 KinB-signalling pathway activation in sporulation DN407_00880 PF01522 Polysaccharide deacetylase DN407_00950 PF02595 Glycerate kinase family DN407_00955 PF00491 Arginase family DN407_00960 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN407_00965 PF07949 YbbR-like protein DN407_00970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN407_00970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN407_00970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN407_00970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN407_00980 PF01380 SIS domain DN407_00985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DN407_00985 PF00326 Prolyl oligopeptidase family DN407_01005 PF00528 Binding-protein-dependent transport system inner membrane component DN407_01010 PF00005 ABC transporter DN407_01010 PF09383 NIL domain DN407_01015 PF03180 NLPA lipoprotein DN407_01020 PF08240 Alcohol dehydrogenase GroES-like domain DN407_01020 PF00107 Zinc-binding dehydrogenase DN407_01030 PF01565 FAD binding domain DN407_01035 PF07690 Major Facilitator Superfamily DN407_01045 PF07690 Major Facilitator Superfamily DN407_01060 PF00528 Binding-protein-dependent transport system inner membrane component DN407_01065 PF12911 N-terminal TM domain of oligopeptide transport permease C DN407_01065 PF00528 Binding-protein-dependent transport system inner membrane component DN407_01070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_01070 PF00005 ABC transporter DN407_01075 PF00005 ABC transporter DN407_01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_01090 PF12833 Helix-turn-helix domain DN407_01105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_01115 PF00248 Aldo/keto reductase family DN407_01120 PF03807 NADP oxidoreductase coenzyme F420-dependent DN407_01120 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN407_01125 PF06800 Sugar transport protein DN407_01130 PF00528 Binding-protein-dependent transport system inner membrane component DN407_01140 PF12728 Helix-turn-helix domain DN407_01140 PF12727 PBP superfamily domain DN407_01150 PF03466 LysR substrate binding domain DN407_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_01155 PF00892 EamA-like transporter family DN407_01160 PF14142 YrzO-like protein DN407_01170 PF01553 Acyltransferase DN407_01180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN407_01180 PF00356 Bacterial regulatory proteins, lacI family DN407_01190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_01190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_01210 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DN407_01230 PF12848 ABC transporter DN407_01230 PF16326 ABC transporter C-terminal domain DN407_01230 PF00005 ABC transporter DN407_01245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_01250 PF00528 Binding-protein-dependent transport system inner membrane component DN407_01260 PF00005 ABC transporter DN407_01260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_01265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_01265 PF00005 ABC transporter DN407_01295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_01300 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN407_01310 PF13520 Amino acid permease DN407_01315 PF07690 Major Facilitator Superfamily DN407_01320 PF07478 D-ala D-ala ligase C-terminus DN407_01320 PF01820 D-ala D-ala ligase N-terminus DN407_01325 PF08245 Mur ligase middle domain DN407_01325 PF02875 Mur ligase family, glutamate ligase domain DN407_01325 PF01225 Mur ligase family, catalytic domain DN407_01330 PF00271 Helicase conserved C-terminal domain DN407_01330 PF00270 DEAD/DEAH box helicase DN407_01335 PF03851 UV-endonuclease UvdE DN407_01340 PF01694 Rhomboid family DN407_01345 PF01648 4'-phosphopantetheinyl transferase superfamily DN407_01355 PF01168 Alanine racemase, N-terminal domain DN407_01355 PF00842 Alanine racemase, C-terminal domain DN407_01360 PF01402 Ribbon-helix-helix protein, copG family DN407_01365 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN407_01370 PF16921 Tex protein YqgF-like domain DN407_01370 PF17674 HHH domain DN407_01370 PF00575 S1 RNA binding domain DN407_01370 PF09371 Tex-like protein N-terminal domain DN407_01380 PF17283 SprT-like zinc ribbon domain DN407_01380 PF10263 SprT-like family DN407_01470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN407_01475 PF00814 Glycoprotease family DN407_01480 PF00583 Acetyltransferase (GNAT) family DN407_01485 PF00814 Glycoprotease family DN407_01490 PF16326 ABC transporter C-terminal domain DN407_01490 PF12848 ABC transporter DN407_01490 PF00005 ABC transporter DN407_01495 PF02629 CoA binding domain DN407_01495 PF06971 Putative DNA-binding protein N-terminus DN407_01505 PF02517 CPBP intramembrane metalloprotease DN407_01510 PF00166 Chaperonin 10 Kd subunit DN407_01515 PF00118 TCP-1/cpn60 chaperonin family DN407_01520 PF00958 GMP synthase C terminal domain DN407_01520 PF00117 Glutamine amidotransferase class-I DN407_01520 PF02540 NAD synthase DN407_01525 PF00860 Permease family DN407_01530 PF00486 Transcriptional regulatory protein, C terminal DN407_01530 PF00072 Response regulator receiver domain DN407_01535 PF00512 His Kinase A (phospho-acceptor) domain DN407_01535 PF00989 PAS fold DN407_01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_01535 PF16736 Single Cache-like DN407_01575 PF00005 ABC transporter DN407_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_01580 PF00512 His Kinase A (phospho-acceptor) domain DN407_01585 PF00486 Transcriptional regulatory protein, C terminal DN407_01585 PF00072 Response regulator receiver domain DN407_01605 PF05045 Rhamnan synthesis protein F DN407_01605 PF14307 Glycosyltransferase WbsX DN407_01625 PF01370 NAD dependent epimerase/dehydratase family DN407_01635 PF00535 Glycosyl transferase family 2 DN407_01655 PF00892 EamA-like transporter family DN407_01685 PF00731 AIR carboxylase DN407_01690 PF02222 ATP-grasp domain DN407_01690 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DN407_01695 PF10397 Adenylosuccinate lyase C-terminus DN407_01695 PF00206 Lyase DN407_01700 PF01259 SAICAR synthetase DN407_01705 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DN407_01715 PF02769 AIR synthase related protein, C-terminal domain DN407_01715 PF00586 AIR synthase related protein, N-terminal domain DN407_01715 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DN407_01720 PF00156 Phosphoribosyl transferase domain DN407_01725 PF00586 AIR synthase related protein, N-terminal domain DN407_01725 PF02769 AIR synthase related protein, C-terminal domain DN407_01730 PF00551 Formyl transferase DN407_01735 PF02142 MGS-like domain DN407_01735 PF01808 AICARFT/IMPCHase bienzyme DN407_01740 PF02844 Phosphoribosylglycinamide synthetase, N domain DN407_01740 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN407_01740 PF02843 Phosphoribosylglycinamide synthetase, C domain DN407_01765 PF01884 PcrB family DN407_01770 PF00580 UvrD/REP helicase N-terminal domain DN407_01770 PF13361 UvrD-like helicase C-terminal domain DN407_01775 PF00533 BRCA1 C Terminus (BRCT) domain DN407_01775 PF01653 NAD-dependent DNA ligase adenylation domain DN407_01775 PF12826 Helix-hairpin-helix motif DN407_01775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DN407_01775 PF03120 NAD-dependent DNA ligase OB-fold domain DN407_01780 PF07537 CamS sex pheromone cAM373 precursor DN407_01785 PF01925 Sulfite exporter TauE/SafE DN407_01790 PF00171 Aldehyde dehydrogenase family DN407_01795 PF00857 Isochorismatase family DN407_01805 PF09383 NIL domain DN407_01805 PF00005 ABC transporter DN407_01810 PF00528 Binding-protein-dependent transport system inner membrane component DN407_01815 PF03180 NLPA lipoprotein DN407_01830 PF17886 HSP20-like domain found in ArsA DN407_01830 PF02374 Anion-transporting ATPase DN407_01835 PF01047 MarR family DN407_01840 PF05360 yiaA/B two helix domain DN407_01845 PF02686 Glu-tRNAGln amidotransferase C subunit DN407_01850 PF01425 Amidase DN407_01855 PF02637 GatB domain DN407_01855 PF02934 GatB/GatE catalytic domain DN407_01860 PF00781 Diacylglycerol kinase catalytic domain DN407_01865 PF13419 Haloacid dehalogenase-like hydrolase DN407_01870 PF00202 Aminotransferase class-III DN407_01875 PF00158 Sigma-54 interaction domain DN407_01880 PF00171 Aldehyde dehydrogenase family DN407_01885 PF00893 Small Multidrug Resistance protein DN407_01895 PF02073 Thermophilic metalloprotease (M29) DN407_01910 PF07670 Nucleoside recognition DN407_01910 PF01773 Na+ dependent nucleoside transporter N-terminus DN407_01910 PF07662 Na+ dependent nucleoside transporter C-terminus DN407_01915 PF13847 Methyltransferase domain DN407_01915 PF01938 TRAM domain DN407_01915 PF05958 tRNA (Uracil-5-)-methyltransferase DN407_01920 PF01207 Dihydrouridine synthase (Dus) DN407_01925 PF07308 Protein of unknown function (DUF1456) DN407_01945 PF13378 Enolase C-terminal domain-like DN407_01945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN407_01960 PF07687 Peptidase dimerisation domain DN407_01960 PF01546 Peptidase family M20/M25/M40 DN407_01970 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_01970 PF13192 Thioredoxin domain DN407_01975 PF00578 AhpC/TSA family DN407_01980 PF01636 Phosphotransferase enzyme family DN407_01990 PF00596 Class II Aldolase and Adducin N-terminal domain DN407_01995 PF01032 FecCD transport family DN407_02000 PF01032 FecCD transport family DN407_02005 PF01497 Periplasmic binding protein DN407_02030 PF12728 Helix-turn-helix domain DN407_02055 PF00512 His Kinase A (phospho-acceptor) domain DN407_02055 PF00989 PAS fold DN407_02055 PF13188 PAS domain DN407_02055 PF13426 PAS domain DN407_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_02075 PF10127 RNA repair pathway DNA polymerase beta family DN407_02090 PF07690 Major Facilitator Superfamily DN407_02095 PF00355 Rieske [2Fe-2S] domain DN407_02095 PF01266 FAD dependent oxidoreductase DN407_02105 PF00528 Binding-protein-dependent transport system inner membrane component DN407_02110 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN407_02115 PF00005 ABC transporter DN407_02120 PF12729 Four helix bundle sensory module for signal transduction DN407_02120 PF00672 HAMP domain DN407_02120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_02125 PF01316 Arginine repressor, DNA binding domain DN407_02125 PF02863 Arginine repressor, C-terminal domain DN407_02135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN407_02135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN407_02140 PF13520 Amino acid permease DN407_02145 PF00696 Amino acid kinase family DN407_02150 PF00027 Cyclic nucleotide-binding domain DN407_02150 PF13545 Crp-like helix-turn-helix domain DN407_02165 PF00128 Alpha amylase, catalytic domain DN407_02165 PF16657 Maltogenic Amylase, C-terminal domain DN407_02170 PF02378 Phosphotransferase system, EIIC DN407_02170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN407_02170 PF00367 phosphotransferase system, EIIB DN407_02175 PF03372 Endonuclease/Exonuclease/phosphatase family DN407_02180 PF01061 ABC-2 type transporter DN407_02185 PF01751 Toprim domain DN407_02185 PF01131 DNA topoisomerase DN407_02190 PF02110 Hydroxyethylthiazole kinase family DN407_02195 PF02581 Thiamine monophosphate synthase DN407_02200 PF03605 Anaerobic c4-dicarboxylate membrane transporter DN407_02205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_02205 PF00672 HAMP domain DN407_02210 PF13193 AMP-binding enzyme C-terminal domain DN407_02210 PF00975 Thioesterase domain DN407_02210 PF00550 Phosphopantetheine attachment site DN407_02210 PF00668 Condensation domain DN407_02210 PF00501 AMP-binding enzyme DN407_02215 PF01910 Thiamine-binding protein DN407_02220 PF00528 Binding-protein-dependent transport system inner membrane component DN407_02230 PF00005 ABC transporter DN407_02240 PF00704 Glycosyl hydrolases family 18 DN407_02240 PF00041 Fibronectin type III domain DN407_02265 PF00440 Bacterial regulatory proteins, tetR family DN407_02265 PF08360 QacR-like protein, C-terminal region DN407_02280 PF11700 Vacuole effluxer Atg22 like DN407_02295 PF09180 Prolyl-tRNA synthetase, C-terminal DN407_02295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN407_02295 PF03129 Anticodon binding domain DN407_02305 PF00480 ROK family DN407_02310 PF02342 TerD domain DN407_02315 PF02342 TerD domain DN407_02320 PF02342 TerD domain DN407_02325 PF03741 Integral membrane protein TerC family DN407_02330 PF14266 Putative component of 'biosynthetic module' DN407_02335 PF05816 Toxic anion resistance protein (TelA) DN407_02340 PF00689 Cation transporting ATPase, C-terminus DN407_02340 PF00690 Cation transporter/ATPase, N-terminus DN407_02345 PF06569 Protein of unknown function (DUF1128) DN407_02350 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN407_02360 PF03631 Virulence factor BrkB DN407_02370 PF00892 EamA-like transporter family DN407_02380 PF10502 Signal peptidase, peptidase S26 DN407_02390 PF09335 SNARE associated Golgi protein DN407_02405 PF16242 Pyridoxamine 5'-phosphate oxidase like DN407_02410 PF01699 Sodium/calcium exchanger protein DN407_02415 PF14167 YfkD-like protein DN407_02420 PF08756 YfkB-like domain DN407_02420 PF04055 Radical SAM superfamily DN407_02430 PF05681 Fumarate hydratase (Fumerase) DN407_02430 PF05683 Fumarase C-terminus DN407_02435 PF01522 Polysaccharide deacetylase DN407_02440 PF00730 HhH-GPD superfamily base excision DNA repair protein DN407_02445 PF01938 TRAM domain DN407_02445 PF05958 tRNA (Uracil-5-)-methyltransferase DN407_02450 PF01416 tRNA pseudouridine synthase DN407_02460 PF00158 Sigma-54 interaction domain DN407_02460 PF13426 PAS domain DN407_02460 PF02954 Bacterial regulatory protein, Fis family DN407_02470 PF00324 Amino acid permease DN407_02475 PF01546 Peptidase family M20/M25/M40 DN407_02475 PF07687 Peptidase dimerisation domain DN407_02495 PF04960 Glutaminase DN407_02505 PF00367 phosphotransferase system, EIIB DN407_02505 PF02378 Phosphotransferase system, EIIC DN407_02510 PF00144 Beta-lactamase DN407_02525 PF00535 Glycosyl transferase family 2 DN407_02530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN407_02530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN407_02530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN407_02535 PF00551 Formyl transferase DN407_02535 PF02911 Formyl transferase, C-terminal domain DN407_02535 PF01370 NAD dependent epimerase/dehydratase family DN407_02540 PF00535 Glycosyl transferase family 2 DN407_02550 PF01228 Glycine radical DN407_02550 PF02901 Pyruvate formate lyase-like DN407_02555 PF04055 Radical SAM superfamily DN407_02560 PF04101 Glycosyltransferase family 28 C-terminal domain DN407_02560 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DN407_02575 PF01979 Amidohydrolase family DN407_02580 PF08338 Domain of unknown function (DUF1731) DN407_02580 PF01370 NAD dependent epimerase/dehydratase family DN407_02585 PF02631 RecX family DN407_02600 PF08176 Small acid-soluble spore protein K family DN407_02605 PF14043 WVELL protein DN407_02610 PF04307 LexA-binding, inner membrane-associated putative hydrolase DN407_02615 PF00730 HhH-GPD superfamily base excision DNA repair protein DN407_02615 PF14815 NUDIX domain DN407_02625 PF04259 Small, acid-soluble spore protein, gamma-type DN407_02630 PF14182 YgaB-like protein DN407_02635 PF04167 Protein of unknown function (DUF402) DN407_02640 PF00005 ABC transporter DN407_02640 PF00664 ABC transporter transmembrane region DN407_02645 PF06081 Aromatic acid exporter family member 1 DN407_02650 PF01645 Conserved region in glutamate synthase DN407_02650 PF00310 Glutamine amidotransferases class-II DN407_02650 PF04898 Glutamate synthase central domain DN407_02650 PF01493 GXGXG motif DN407_02655 PF00202 Aminotransferase class-III DN407_02660 PF00005 ABC transporter DN407_02675 PF07885 Ion channel DN407_02680 PF00578 AhpC/TSA family DN407_02685 PF01475 Ferric uptake regulator family DN407_02695 PF11023 Zinc-ribbon containing domain DN407_02795 PF01709 Transcriptional regulator DN407_02800 PF13344 Haloacid dehalogenase-like hydrolase DN407_02800 PF00293 NUDIX domain DN407_02805 PF00912 Transglycosylase DN407_02805 PF00905 Penicillin binding protein transpeptidase domain DN407_02810 PF13462 Thioredoxin DN407_02820 PF08331 Domain of unknown function (DUF1730) DN407_02825 PF12671 Putative amidase domain DN407_02830 PF00588 SpoU rRNA Methylase family DN407_02835 PF00563 EAL domain DN407_02835 PF00990 Diguanylate cyclase, GGDEF domain DN407_02835 PF00498 FHA domain DN407_02840 PF06798 PrkA serine protein kinase C-terminal domain DN407_02840 PF08298 PrkA AAA domain DN407_02845 PF04285 Protein of unknown function (DUF444) DN407_02860 PF02028 BCCT, betaine/carnitine/choline family transporter DN407_02865 PF18496 Collagenase G catalytic helper subdomain DN407_02865 PF01752 Collagenase DN407_02865 PF08453 Peptidase family M9 N-terminal DN407_02875 PF15975 Flotillin DN407_02875 PF01145 SPFH domain / Band 7 family DN407_02880 PF00672 HAMP domain DN407_02880 PF02743 Cache domain DN407_02880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_02885 PF17203 Single cache domain 3 DN407_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_02885 PF00989 PAS fold DN407_02885 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN407_02890 PF00072 Response regulator receiver domain DN407_02890 PF12431 Transcriptional regulator DN407_02895 PF03600 Citrate transporter DN407_02920 PF04309 Glycerol-3-phosphate responsive antiterminator DN407_02925 PF17912 MalK OB fold domain DN407_02925 PF00005 ABC transporter DN407_02930 PF00528 Binding-protein-dependent transport system inner membrane component DN407_02935 PF00528 Binding-protein-dependent transport system inner membrane component DN407_02940 PF13416 Bacterial extracellular solute-binding protein DN407_02945 PF00149 Calcineurin-like phosphoesterase DN407_02950 PF00072 Response regulator receiver domain DN407_02950 PF00486 Transcriptional regulatory protein, C terminal DN407_02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_02955 PF00512 His Kinase A (phospho-acceptor) domain DN407_02965 PF13529 Peptidase_C39 like family DN407_02970 PF00672 HAMP domain DN407_02970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_02970 PF02743 Cache domain DN407_02975 PF17203 Single cache domain 3 DN407_02975 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN407_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_02975 PF00989 PAS fold DN407_02980 PF00072 Response regulator receiver domain DN407_02985 PF03390 2-hydroxycarboxylate transporter family DN407_02990 PF03949 Malic enzyme, NAD binding domain DN407_02990 PF00390 Malic enzyme, N-terminal domain DN407_03000 PF00892 EamA-like transporter family DN407_03005 PF00155 Aminotransferase class I and II DN407_03005 PF00392 Bacterial regulatory proteins, gntR family DN407_03015 PF00989 PAS fold DN407_03015 PF18698 Histidine kinase sensor domain DN407_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_03015 PF00672 HAMP domain DN407_03015 PF00512 His Kinase A (phospho-acceptor) domain DN407_03020 PF00486 Transcriptional regulatory protein, C terminal DN407_03020 PF00072 Response regulator receiver domain DN407_03025 PF00583 Acetyltransferase (GNAT) family DN407_03025 PF13508 Acetyltransferase (GNAT) domain DN407_03030 PF02634 FdhD/NarQ family DN407_03035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN407_03035 PF01568 Molydopterin dinucleotide binding domain DN407_03035 PF00384 Molybdopterin oxidoreductase DN407_03035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN407_03035 PF00037 4Fe-4S binding domain DN407_03040 PF07849 Protein of unknown function (DUF1641) DN407_03050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN407_03050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN407_03055 PF13520 Amino acid permease DN407_03065 PF01022 Bacterial regulatory protein, arsR family DN407_03070 PF00403 Heavy-metal-associated domain DN407_03075 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN407_03075 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN407_03075 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DN407_03085 PF07504 Fungalysin/Thermolysin Propeptide Motif DN407_03085 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN407_03085 PF03413 Peptidase propeptide and YPEB domain DN407_03085 PF01447 Thermolysin metallopeptidase, catalytic domain DN407_03105 PF04294 VanW like protein DN407_03110 PF03816 Cell envelope-related transcriptional attenuator domain DN407_03115 PF01773 Na+ dependent nucleoside transporter N-terminus DN407_03115 PF07662 Na+ dependent nucleoside transporter C-terminus DN407_03120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_03125 PF00571 CBS domain DN407_03125 PF01595 Cyclin M transmembrane N-terminal domain DN407_03125 PF03471 Transporter associated domain DN407_03130 PF10415 Fumarase C C-terminus DN407_03130 PF00206 Lyase DN407_03135 PF02652 L-lactate permease DN407_03140 PF01022 Bacterial regulatory protein, arsR family DN407_03145 PF08141 Small acid-soluble spore protein H family DN407_03150 PF00854 POT family DN407_03155 PF01497 Periplasmic binding protein DN407_03160 PF01032 FecCD transport family DN407_03165 PF01032 FecCD transport family DN407_03170 PF00005 ABC transporter DN407_03175 PF08241 Methyltransferase domain DN407_03180 PF00155 Aminotransferase class I and II DN407_03185 PF01370 NAD dependent epimerase/dehydratase family DN407_03190 PF00293 NUDIX domain DN407_03190 PF13344 Haloacid dehalogenase-like hydrolase DN407_03195 PF00092 von Willebrand factor type A domain DN407_03200 PF07728 AAA domain (dynein-related subfamily) DN407_03205 PF13396 Phospholipase_D-nuclease N-terminal DN407_03205 PF13091 PLD-like domain DN407_03215 PF00990 Diguanylate cyclase, GGDEF domain DN407_03215 PF00563 EAL domain DN407_03215 PF03707 Bacterial signalling protein N terminal repeat DN407_03220 PF13520 Amino acid permease DN407_03225 PF00392 Bacterial regulatory proteins, gntR family DN407_03225 PF07702 UTRA domain DN407_03230 PF00367 phosphotransferase system, EIIB DN407_03230 PF02378 Phosphotransferase system, EIIC DN407_03235 PF00128 Alpha amylase, catalytic domain DN407_03235 PF16657 Maltogenic Amylase, C-terminal domain DN407_03250 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_03255 PF01636 Phosphotransferase enzyme family DN407_03260 PF01235 Sodium:alanine symporter family DN407_03270 PF00005 ABC transporter DN407_03275 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN407_03280 PF00528 Binding-protein-dependent transport system inner membrane component DN407_03285 PF00528 Binding-protein-dependent transport system inner membrane component DN407_03290 PF00324 Amino acid permease DN407_03305 PF04542 Sigma-70 region 2 DN407_03305 PF08281 Sigma-70, region 4 DN407_03315 PF13280 WYL domain DN407_03315 PF08279 HTH domain DN407_03320 PF01872 RibD C-terminal domain DN407_03325 PF00512 His Kinase A (phospho-acceptor) domain DN407_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_03325 PF00672 HAMP domain DN407_03325 PF00989 PAS fold DN407_03325 PF18698 Histidine kinase sensor domain DN407_03330 PF00072 Response regulator receiver domain DN407_03330 PF00486 Transcriptional regulatory protein, C terminal DN407_03345 PF00582 Universal stress protein family DN407_03355 PF07690 Major Facilitator Superfamily DN407_03360 PF01047 MarR family DN407_03365 PF07690 Major Facilitator Superfamily DN407_03370 PF00356 Bacterial regulatory proteins, lacI family DN407_03375 PF00294 pfkB family carbohydrate kinase DN407_03380 PF05025 RbsD / FucU transport protein family DN407_03385 PF00005 ABC transporter DN407_03390 PF02653 Branched-chain amino acid transport system / permease component DN407_03395 PF13407 Periplasmic binding protein domain DN407_03400 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN407_03405 PF05547 Immune inhibitor A peptidase M6 DN407_03425 PF08240 Alcohol dehydrogenase GroES-like domain DN407_03425 PF00107 Zinc-binding dehydrogenase DN407_03435 PF00882 Zinc dependent phospholipase C DN407_03440 PF03372 Endonuclease/Exonuclease/phosphatase family DN407_03470 PF02673 Bacitracin resistance protein BacA DN407_03475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_03475 PF00672 HAMP domain DN407_03475 PF02743 Cache domain DN407_03480 PF03990 G5-linked-Ubiquitin-like domain DN407_03480 PF06725 3D domain DN407_03480 PF07501 G5 domain DN407_03485 PF01381 Helix-turn-helix DN407_03495 PF04203 Sortase domain DN407_03505 PF00854 POT family DN407_03510 PF05525 Branched-chain amino acid transport protein DN407_03525 PF00324 Amino acid permease DN407_03530 PF00860 Permease family DN407_03545 PF13673 Acetyltransferase (GNAT) domain DN407_03555 PF02080 TrkA-C domain DN407_03555 PF02254 TrkA-N domain DN407_03555 PF00999 Sodium/hydrogen exchanger family DN407_03565 PF00510 Cytochrome c oxidase subunit III DN407_03570 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN407_03575 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN407_03580 PF00324 Amino acid permease DN407_03585 PF13529 Peptidase_C39 like family DN407_03590 PF07687 Peptidase dimerisation domain DN407_03590 PF01546 Peptidase family M20/M25/M40 DN407_03595 PF11755 Protein of unknown function (DUF3311) DN407_03600 PF00474 Sodium:solute symporter family DN407_03605 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_03610 PF03845 Spore germination protein DN407_03615 PF05504 Spore germination B3/ GerAC like, C-terminal DN407_03620 PF07664 Ferrous iron transport protein B C terminus DN407_03620 PF02421 Ferrous iron transport protein B DN407_03620 PF17910 FeoB cytosolic helical domain DN407_03620 PF07670 Nucleoside recognition DN407_03625 PF17910 FeoB cytosolic helical domain DN407_03625 PF07664 Ferrous iron transport protein B C terminus DN407_03625 PF02421 Ferrous iron transport protein B DN407_03625 PF07670 Nucleoside recognition DN407_03630 PF17910 FeoB cytosolic helical domain DN407_03630 PF07670 Nucleoside recognition DN407_03630 PF04023 FeoA domain DN407_03630 PF02421 Ferrous iron transport protein B DN407_03630 PF07664 Ferrous iron transport protein B C terminus DN407_03635 PF12849 PBP superfamily domain DN407_03640 PF00528 Binding-protein-dependent transport system inner membrane component DN407_03645 PF00528 Binding-protein-dependent transport system inner membrane component DN407_03650 PF00873 AcrB/AcrD/AcrF family DN407_03770 PF00571 CBS domain DN407_03785 PF00246 Zinc carboxypeptidase DN407_03785 PF08239 Bacterial SH3 domain DN407_03790 PF03070 TENA/THI-4/PQQC family DN407_03795 PF00005 ABC transporter DN407_03800 PF00528 Binding-protein-dependent transport system inner membrane component DN407_03805 PF09084 NMT1/THI5 like DN407_03810 PF02581 Thiamine monophosphate synthase DN407_03815 PF01266 FAD dependent oxidoreductase DN407_03820 PF02597 ThiS family DN407_03825 PF05690 Thiazole biosynthesis protein ThiG DN407_03830 PF00899 ThiF family DN407_03835 PF08543 Phosphomethylpyrimidine kinase DN407_03860 PF03814 Potassium-transporting ATPase A subunit DN407_03870 PF02669 K+-transporting ATPase, c chain DN407_03875 PF02702 Osmosensitive K+ channel His kinase sensor domain DN407_03880 PF07690 Major Facilitator Superfamily DN407_03885 PF01047 MarR family DN407_03910 PF00005 ABC transporter DN407_03920 PF00860 Permease family DN407_03930 PF17969 L,D-transpeptidase C-terminal domain DN407_03930 PF03734 L,D-transpeptidase catalytic domain DN407_03945 PF00085 Thioredoxin DN407_03950 PF02600 Disulfide bond formation protein DsbB DN407_03955 PF14148 YhdB-like protein DN407_03965 PF03845 Spore germination protein DN407_03975 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_03985 PF00881 Nitroreductase family DN407_03990 PF04293 SpoVR like protein DN407_04000 PF00089 Trypsin DN407_04010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN407_04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_04015 PF02583 Metal-sensitive transcriptional repressor DN407_04020 PF01206 Sulfurtransferase TusA DN407_04020 PF00581 Rhodanese-like domain DN407_04025 PF00581 Rhodanese-like domain DN407_04025 PF00753 Metallo-beta-lactamase superfamily DN407_04030 PF01206 Sulfurtransferase TusA DN407_04035 PF00581 Rhodanese-like domain DN407_04035 PF01206 Sulfurtransferase TusA DN407_04045 PF13686 DsrE/DsrF/DrsH-like family DN407_04050 PF01925 Sulfite exporter TauE/SafE DN407_04060 PF03816 Cell envelope-related transcriptional attenuator domain DN407_04065 PF00107 Zinc-binding dehydrogenase DN407_04065 PF08240 Alcohol dehydrogenase GroES-like domain DN407_04070 PF02690 Na+/Pi-cotransporter DN407_04075 PF07690 Major Facilitator Superfamily DN407_04090 PF08279 HTH domain DN407_04090 PF05043 Mga helix-turn-helix domain DN407_04090 PF00874 PRD domain DN407_04090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN407_04095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN407_04100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN407_04105 PF02378 Phosphotransferase system, EIIC DN407_04125 PF06725 3D domain DN407_04125 PF01476 LysM domain DN407_04130 PF12704 MacB-like periplasmic core domain DN407_04130 PF02687 FtsX-like permease family DN407_04135 PF00005 ABC transporter DN407_04145 PF09529 Integral membrane protein (intg_mem_TP0381) DN407_04160 PF05525 Branched-chain amino acid transport protein DN407_04165 PF05067 Manganese containing catalase DN407_04170 PF12652 CotJB protein DN407_04175 PF11007 Spore coat associated protein JA (CotJA) DN407_04190 PF02735 Ku70/Ku80 beta-barrel domain DN407_04200 PF09335 SNARE associated Golgi protein DN407_04230 PF13520 Amino acid permease DN407_04235 PF00999 Sodium/hydrogen exchanger family DN407_04245 PF01418 Helix-turn-helix domain, rpiR family DN407_04245 PF01380 SIS domain DN407_04250 PF13580 SIS domain DN407_04255 PF00367 phosphotransferase system, EIIB DN407_04255 PF02378 Phosphotransferase system, EIIC DN407_04265 PF07681 DoxX DN407_04280 PF00892 EamA-like transporter family DN407_04285 PF01037 Lrp/AsnC ligand binding domain DN407_04290 PF00583 Acetyltransferase (GNAT) family DN407_04290 PF14698 Argininosuccinate lyase C-terminal DN407_04290 PF00206 Lyase DN407_04295 PF00106 short chain dehydrogenase DN407_04300 PF13411 MerR HTH family regulatory protein DN407_04305 PF00893 Small Multidrug Resistance protein DN407_04315 PF17934 Tetracyclin repressor-like, C-terminal domain DN407_04315 PF00440 Bacterial regulatory proteins, tetR family DN407_04320 PF07690 Major Facilitator Superfamily DN407_04325 PF01638 HxlR-like helix-turn-helix DN407_04335 PF02525 Flavodoxin-like fold DN407_04340 PF12793 Sugar transport-related sRNA regulator N-term DN407_04340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_04345 PF07690 Major Facilitator Superfamily DN407_04355 PF01965 DJ-1/PfpI family DN407_04360 PF06628 Catalase-related immune-responsive DN407_04360 PF18011 C-terminal domain found in long catalases DN407_04360 PF00199 Catalase DN407_04370 PF13520 Amino acid permease DN407_04375 PF01177 Asp/Glu/Hydantoin racemase DN407_04385 PF00171 Aldehyde dehydrogenase family DN407_04400 PF00664 ABC transporter transmembrane region DN407_04400 PF00005 ABC transporter DN407_04405 PF00664 ABC transporter transmembrane region DN407_04405 PF00005 ABC transporter DN407_04415 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN407_04420 PF00528 Binding-protein-dependent transport system inner membrane component DN407_04425 PF00005 ABC transporter DN407_04430 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_04440 PF14398 YheC/D like ATP-grasp DN407_04450 PF04286 Protein of unknown function (DUF445) DN407_04455 PF06133 Control of competence regulator ComK, YlbF/YmcA DN407_04470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_04470 PF00205 Thiamine pyrophosphate enzyme, central domain DN407_04470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN407_04475 PF03306 Alpha-acetolactate decarboxylase DN407_04485 PF02245 Methylpurine-DNA glycosylase (MPG) DN407_04500 PF01510 N-acetylmuramoyl-L-alanine amidase DN407_04500 PF01471 Putative peptidoglycan binding domain DN407_04505 PF04055 Radical SAM superfamily DN407_04510 PF13193 AMP-binding enzyme C-terminal domain DN407_04510 PF00501 AMP-binding enzyme DN407_04525 PF00916 Sulfate permease family DN407_04525 PF01740 STAS domain DN407_04530 PF01943 Polysaccharide biosynthesis protein DN407_04530 PF14667 Polysaccharide biosynthesis C-terminal domain DN407_04555 PF00378 Enoyl-CoA hydratase/isomerase DN407_04575 PF05343 M42 glutamyl aminopeptidase DN407_04580 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_04580 PF00395 S-layer homology domain DN407_04590 PF11121 Protein of unknown function (DUF2639) DN407_04595 PF05544 Proline racemase DN407_04600 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN407_04610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_04615 PF00528 Binding-protein-dependent transport system inner membrane component DN407_04620 PF12911 N-terminal TM domain of oligopeptide transport permease C DN407_04620 PF00528 Binding-protein-dependent transport system inner membrane component DN407_04625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_04625 PF00005 ABC transporter DN407_04630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_04630 PF00005 ABC transporter DN407_04655 PF00753 Metallo-beta-lactamase superfamily DN407_04655 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN407_04680 PF00083 Sugar (and other) transporter DN407_04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_04685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN407_04690 PF12431 Transcriptional regulator DN407_04690 PF00072 Response regulator receiver domain DN407_04690 PF08279 HTH domain DN407_04695 PF03401 Tripartite tricarboxylate transporter family receptor DN407_04720 PF05872 Bacterial protein of unknown function (DUF853) DN407_04730 PF13476 AAA domain DN407_04740 PF00266 Aminotransferase class-V DN407_04775 PF06445 GyrI-like small molecule binding domain DN407_04775 PF13411 MerR HTH family regulatory protein DN407_04790 PF00772 DnaB-like helicase N terminal domain DN407_04790 PF03796 DnaB-like helicase C terminal domain DN407_04800 PF01925 Sulfite exporter TauE/SafE DN407_04810 PF00158 Sigma-54 interaction domain DN407_04810 PF02954 Bacterial regulatory protein, Fis family DN407_04810 PF13426 PAS domain DN407_04815 PF07722 Peptidase C26 DN407_04820 PF03606 C4-dicarboxylate anaerobic carrier DN407_04830 PF07690 Major Facilitator Superfamily DN407_04845 PF09680 Family of unknown function DN407_04850 PF13302 Acetyltransferase (GNAT) domain DN407_04915 PF01066 CDP-alcohol phosphatidyltransferase DN407_04935 PF02733 Dak1 domain DN407_04950 PF02733 Dak1 domain DN407_04985 PF00395 S-layer homology domain DN407_05030 PF11181 Heat induced stress protein YflT DN407_05050 PF01740 STAS domain DN407_05055 PF13581 Histidine kinase-like ATPase domain DN407_05060 PF04542 Sigma-70 region 2 DN407_05060 PF04539 Sigma-70 region 3 DN407_05060 PF04545 Sigma-70, region 4 DN407_05070 PF07228 Stage II sporulation protein E (SpoIIE) DN407_05070 PF13426 PAS domain DN407_05075 PF01739 CheR methyltransferase, SAM binding domain DN407_05075 PF03705 CheR methyltransferase, all-alpha domain DN407_05080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DN407_05080 PF01627 Hpt domain DN407_05080 PF00512 His Kinase A (phospho-acceptor) domain DN407_05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_05080 PF00072 Response regulator receiver domain DN407_05080 PF00672 HAMP domain DN407_05100 PF01906 Putative heavy-metal-binding DN407_05115 PF00107 Zinc-binding dehydrogenase DN407_05115 PF08240 Alcohol dehydrogenase GroES-like domain DN407_05120 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DN407_05125 PF11121 Protein of unknown function (DUF2639) DN407_05140 PF00149 Calcineurin-like phosphoesterase DN407_05145 PF13514 AAA domain DN407_05150 PF01966 HD domain DN407_05150 PF01336 OB-fold nucleic acid binding domain DN407_05155 PF00144 Beta-lactamase DN407_05175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_05180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_05190 PF18801 response regulator aspartate phosphatase H, N terminal DN407_05190 PF17874 MalT-like TPR region DN407_05200 PF08386 TAP-like protein DN407_05200 PF00561 alpha/beta hydrolase fold DN407_05205 PF14147 Sporulation protein YhaL DN407_05220 PF00190 Cupin DN407_05225 PF01381 Helix-turn-helix DN407_05230 PF04309 Glycerol-3-phosphate responsive antiterminator DN407_05235 PF00230 Major intrinsic protein DN407_05240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN407_05240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN407_05245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DN407_05245 PF01266 FAD dependent oxidoreductase DN407_05250 PF03551 Transcriptional regulator PadR-like family DN407_05260 PF08281 Sigma-70, region 4 DN407_05260 PF04542 Sigma-70 region 2 DN407_05270 PF01098 Cell cycle protein DN407_05275 PF13538 UvrD-like helicase C-terminal domain DN407_05300 PF01047 MarR family DN407_05305 PF12732 YtxH-like protein DN407_05310 PF01230 HIT domain DN407_05315 PF00005 ABC transporter DN407_05320 PF05975 Bacterial ABC transporter protein EcsB DN407_05325 PF12787 EcsC protein family DN407_05335 PF00440 Bacterial regulatory proteins, tetR family DN407_05335 PF17934 Tetracyclin repressor-like, C-terminal domain DN407_05340 PF03703 Bacterial PH domain DN407_05345 PF03703 Bacterial PH domain DN407_05370 PF10014 2OG-Fe dioxygenase DN407_05380 PF00892 EamA-like transporter family DN407_05385 PF03703 Bacterial PH domain DN407_05390 PF03703 Bacterial PH domain DN407_05395 PF03992 Antibiotic biosynthesis monooxygenase DN407_05400 PF00912 Transglycosylase DN407_05400 PF00905 Penicillin binding protein transpeptidase domain DN407_05405 PF01208 Uroporphyrinogen decarboxylase (URO-D) DN407_05440 PF03965 Penicillinase repressor DN407_05450 PF17932 Tetracyclin repressor-like, C-terminal domain DN407_05450 PF00440 Bacterial regulatory proteins, tetR family DN407_05480 PF00356 Bacterial regulatory proteins, lacI family DN407_05485 PF14149 YhfH-like protein DN407_05490 PF12706 Beta-lactamase superfamily domain DN407_05495 PF10437 Bacterial lipoate protein ligase C-terminus DN407_05495 PF03099 Biotin/lipoate A/B protein ligase family DN407_05505 PF13193 AMP-binding enzyme C-terminal domain DN407_05505 PF00501 AMP-binding enzyme DN407_05510 PF00395 S-layer homology domain DN407_05510 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_05520 PF00528 Binding-protein-dependent transport system inner membrane component DN407_05525 PF00528 Binding-protein-dependent transport system inner membrane component DN407_05530 PF00005 ABC transporter DN407_05530 PF12857 TOBE-like domain DN407_05530 PF17850 CysA C-terminal regulatory domain DN407_05535 PF07968 Leukocidin/Hemolysin toxin family DN407_05545 PF00149 Calcineurin-like phosphoesterase DN407_05550 PF01966 HD domain DN407_05560 PF08281 Sigma-70, region 4 DN407_05560 PF04542 Sigma-70 region 2 DN407_05570 PF06445 GyrI-like small molecule binding domain DN407_05570 PF12833 Helix-turn-helix domain DN407_05580 PF00512 His Kinase A (phospho-acceptor) domain DN407_05580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_05585 PF00072 Response regulator receiver domain DN407_05585 PF00486 Transcriptional regulatory protein, C terminal DN407_05605 PF16491 CAAX prenyl protease N-terminal, five membrane helices DN407_05605 PF01435 Peptidase family M48 DN407_05610 PF02743 Cache domain DN407_05610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_05610 PF00672 HAMP domain DN407_05615 PF06452 Carbohydrate family 9 binding domain-like DN407_05615 PF02018 Carbohydrate binding domain DN407_05615 PF00331 Glycosyl hydrolase family 10 DN407_05615 PF00395 S-layer homology domain DN407_05625 PF01274 Malate synthase DN407_05630 PF00463 Isocitrate lyase family DN407_05645 PF00313 'Cold-shock' DNA-binding domain DN407_05665 PF09335 SNARE associated Golgi protein DN407_05670 PF10502 Signal peptidase, peptidase S26 DN407_05675 PF12705 PD-(D/E)XK nuclease superfamily DN407_05675 PF13361 UvrD-like helicase C-terminal domain DN407_05680 PF13361 UvrD-like helicase C-terminal domain DN407_05680 PF00580 UvrD/REP helicase N-terminal domain DN407_05680 PF12705 PD-(D/E)XK nuclease superfamily DN407_05690 PF10676 Spore germination protein gerPA/gerPF DN407_05695 PF10970 Spore germination protein GerPE DN407_05705 PF10737 Spore germination protein GerPC DN407_05710 PF10803 Spore germination GerPB DN407_05715 PF10676 Spore germination protein gerPA/gerPF DN407_05720 PF09388 Spo0E like sporulation regulatory protein DN407_05725 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN407_05735 PF00202 Aminotransferase class-III DN407_05750 PF00733 Asparagine synthase DN407_05750 PF13537 Glutamine amidotransferase domain DN407_05760 PF00199 Catalase DN407_05760 PF06628 Catalase-related immune-responsive DN407_05770 PF00690 Cation transporter/ATPase, N-terminus DN407_05770 PF00689 Cation transporting ATPase, C-terminus DN407_05795 PF06803 Protein of unknown function (DUF1232) DN407_05800 PF00909 Ammonium Transporter Family DN407_05805 PF00128 Alpha amylase, catalytic domain DN407_05815 PF04461 Protein of unknown function (DUF520) DN407_05820 PF13509 S1 domain DN407_05820 PF17783 CvfB-like winged helix domain DN407_05835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_05835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_05840 PF12758 Protein of unknown function (DUF3813) DN407_05855 PF14168 YjzC-like protein DN407_05860 PF10431 C-terminal, D2-small domain, of ClpB protein DN407_05860 PF00004 ATPase family associated with various cellular activities (AAA) DN407_05860 PF02861 Clp amino terminal domain, pathogenicity island component DN407_05860 PF07724 AAA domain (Cdc48 subfamily) DN407_05860 PF17871 AAA lid domain DN407_05880 PF10815 ComZ DN407_05885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN407_05885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN407_05890 PF00109 Beta-ketoacyl synthase, N-terminal domain DN407_05890 PF02801 Beta-ketoacyl synthase, C-terminal domain DN407_05895 PF10026 Predicted Zn-dependent protease (DUF2268) DN407_05900 PF12227 Protein of unknown function (DUF3603) DN407_05905 PF00579 tRNA synthetases class I (W and Y) DN407_05915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_05920 PF00528 Binding-protein-dependent transport system inner membrane component DN407_05925 PF00528 Binding-protein-dependent transport system inner membrane component DN407_05925 PF12911 N-terminal TM domain of oligopeptide transport permease C DN407_05930 PF00005 ABC transporter DN407_05930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_05935 PF00005 ABC transporter DN407_05935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN407_05940 PF01554 MatE DN407_05945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_05955 PF03960 ArsC family DN407_05960 PF03741 Integral membrane protein TerC family DN407_05965 PF05389 Negative regulator of genetic competence (MecA) DN407_05970 PF13396 Phospholipase_D-nuclease N-terminal DN407_05970 PF13091 PLD-like domain DN407_05980 PF08439 Oligopeptidase F DN407_05980 PF01432 Peptidase family M3 DN407_05990 PF01152 Bacterial-like globin DN407_05995 PF01928 CYTH domain DN407_06005 PF04607 Region found in RelA / SpoT proteins DN407_06010 PF01513 ATP-NAD kinase DN407_06015 PF00849 RNA pseudouridylate synthase DN407_06025 PF00149 Calcineurin-like phosphoesterase DN407_06030 PF01098 Cell cycle protein DN407_06035 PF00535 Glycosyl transferase family 2 DN407_06040 PF08241 Methyltransferase domain DN407_06045 PF05711 Macrocin-O-methyltransferase (TylF) DN407_06055 PF00535 Glycosyl transferase family 2 DN407_06055 PF13181 Tetratricopeptide repeat DN407_06075 PF00483 Nucleotidyl transferase DN407_06080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DN407_06085 PF16363 GDP-mannose 4,6 dehydratase DN407_06090 PF04321 RmlD substrate binding domain DN407_06110 PF07098 Protein of unknown function (DUF1360) DN407_06130 PF13361 UvrD-like helicase C-terminal domain DN407_06130 PF00580 UvrD/REP helicase N-terminal domain DN407_06135 PF13673 Acetyltransferase (GNAT) domain DN407_06145 PF00756 Putative esterase DN407_06165 PF02368 Bacterial Ig-like domain (group 2) DN407_06170 PF00474 Sodium:solute symporter family DN407_06185 PF00117 Glutamine amidotransferase class-I DN407_06185 PF02885 Glycosyl transferase family, helical bundle domain DN407_06185 PF00591 Glycosyl transferase family, a/b domain DN407_06190 PF00591 Glycosyl transferase family, a/b domain DN407_06190 PF02885 Glycosyl transferase family, helical bundle domain DN407_06195 PF00218 Indole-3-glycerol phosphate synthase DN407_06200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DN407_06205 PF00291 Pyridoxal-phosphate dependent enzyme DN407_06210 PF00290 Tryptophan synthase alpha chain DN407_06220 PF02652 L-lactate permease DN407_06225 PF10042 Uncharacterized conserved protein (DUF2278) DN407_06250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN407_06250 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_06265 PF00881 Nitroreductase family DN407_06280 PF02817 e3 binding domain DN407_06280 PF00364 Biotin-requiring enzyme DN407_06280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN407_06285 PF02779 Transketolase, pyrimidine binding domain DN407_06285 PF16870 2-oxoglutarate dehydrogenase C-terminal DN407_06285 PF00676 Dehydrogenase E1 component DN407_06335 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_06335 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_06345 PF12389 Camelysin metallo-endopeptidase DN407_06355 PF12389 Camelysin metallo-endopeptidase DN407_06360 PF08671 Anti-repressor SinI DN407_06360 PF01381 Helix-turn-helix DN407_06370 PF05547 Immune inhibitor A peptidase M6 DN407_06375 PF00171 Aldehyde dehydrogenase family DN407_06380 PF08402 TOBE domain DN407_06380 PF00005 ABC transporter DN407_06385 PF00528 Binding-protein-dependent transport system inner membrane component DN407_06390 PF00528 Binding-protein-dependent transport system inner membrane component DN407_06395 PF13416 Bacterial extracellular solute-binding protein DN407_06400 PF01569 PAP2 superfamily DN407_06405 PF03176 MMPL family DN407_06415 PF00849 RNA pseudouridylate synthase DN407_06415 PF01479 S4 domain DN407_06425 PF00188 Cysteine-rich secretory protein family DN407_06430 PF13183 4Fe-4S dicluster domain DN407_06430 PF02754 Cysteine-rich domain DN407_06435 PF02913 FAD linked oxidases, C-terminal domain DN407_06435 PF01565 FAD binding domain DN407_06440 PF05651 Putative sugar diacid recognition DN407_06440 PF17853 GGDEF-like domain DN407_06440 PF13556 PucR C-terminal helix-turn-helix domain DN407_06450 PF00072 Response regulator receiver domain DN407_06450 PF00486 Transcriptional regulatory protein, C terminal DN407_06455 PF00672 HAMP domain DN407_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_06455 PF00512 His Kinase A (phospho-acceptor) domain DN407_06455 PF00989 PAS fold DN407_06455 PF18698 Histidine kinase sensor domain DN407_06460 PF00392 Bacterial regulatory proteins, gntR family DN407_06460 PF07729 FCD domain DN407_06465 PF02754 Cysteine-rich domain DN407_06470 PF02589 LUD domain DN407_06470 PF11870 Domain of unknown function (DUF3390) DN407_06470 PF13183 4Fe-4S dicluster domain DN407_06475 PF02589 LUD domain DN407_06480 PF01478 Type IV leader peptidase family DN407_06480 PF06750 Bacterial Peptidase A24 N-terminal domain DN407_06490 PF01226 Formate/nitrite transporter DN407_06495 PF03741 Integral membrane protein TerC family DN407_06500 PF02386 Cation transport protein DN407_06505 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_06510 PF01575 MaoC like domain DN407_06535 PF00561 alpha/beta hydrolase fold DN407_06545 PF02386 Cation transport protein DN407_06565 PF00005 ABC transporter DN407_06565 PF08402 TOBE domain DN407_06570 PF00528 Binding-protein-dependent transport system inner membrane component DN407_06575 PF13419 Haloacid dehalogenase-like hydrolase DN407_06580 PF00266 Aminotransferase class-V DN407_06590 PF08220 DeoR-like helix-turn-helix domain DN407_06590 PF00455 DeoR C terminal sensor domain DN407_06600 PF00596 Class II Aldolase and Adducin N-terminal domain DN407_06610 PF04748 Divergent polysaccharide deacetylase DN407_06615 PF09388 Spo0E like sporulation regulatory protein DN407_06620 PF02743 Cache domain DN407_06620 PF00512 His Kinase A (phospho-acceptor) domain DN407_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_06625 PF01047 MarR family DN407_06635 PF12867 DinB superfamily DN407_06640 PF00989 PAS fold DN407_06640 PF00512 His Kinase A (phospho-acceptor) domain DN407_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_06640 PF13188 PAS domain DN407_06640 PF13426 PAS domain DN407_06645 PF06508 Queuosine biosynthesis protein QueC DN407_06650 PF01242 6-pyruvoyl tetrahydropterin synthase DN407_06655 PF04055 Radical SAM superfamily DN407_06660 PF14489 QueF-like protein DN407_06665 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DN407_06695 PF07972 NrdI Flavodoxin like DN407_06700 PF02867 Ribonucleotide reductase, barrel domain DN407_06700 PF00317 Ribonucleotide reductase, all-alpha domain DN407_06700 PF08343 Ribonucleotide reductase N-terminal DN407_06705 PF00268 Ribonucleotide reductase, small chain DN407_06710 PF00392 Bacterial regulatory proteins, gntR family DN407_06715 PF00005 ABC transporter DN407_06725 PF00005 ABC transporter DN407_06745 PF01037 Lrp/AsnC ligand binding domain DN407_06755 PF00857 Isochorismatase family DN407_06765 PF02016 LD-carboxypeptidase N-terminal domain DN407_06765 PF17676 LD-carboxypeptidase C-terminal domain DN407_06770 PF03060 Nitronate monooxygenase DN407_06775 PF04914 DltD protein DN407_06780 PF00550 Phosphopantetheine attachment site DN407_06785 PF03062 MBOAT, membrane-bound O-acyltransferase family DN407_06790 PF13193 AMP-binding enzyme C-terminal domain DN407_06790 PF00501 AMP-binding enzyme DN407_06800 PF07687 Peptidase dimerisation domain DN407_06800 PF01546 Peptidase family M20/M25/M40 DN407_06810 PF00258 Flavodoxin DN407_06830 PF01554 MatE DN407_06835 PF02673 Bacitracin resistance protein BacA DN407_06850 PF01047 MarR family DN407_06860 PF00375 Sodium:dicarboxylate symporter family DN407_06865 PF02386 Cation transport protein DN407_06875 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN407_06885 PF03698 Uncharacterised protein family (UPF0180) DN407_06895 PF01063 Amino-transferase class IV DN407_06900 PF00205 Thiamine pyrophosphate enzyme, central domain DN407_06900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_06900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN407_06905 PF10369 Small subunit of acetolactate synthase DN407_06905 PF01842 ACT domain DN407_06910 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN407_06910 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN407_06915 PF00682 HMGL-like DN407_06915 PF08502 LeuA allosteric (dimerisation) domain DN407_06920 PF00180 Isocitrate/isopropylmalate dehydrogenase DN407_06925 PF00330 Aconitase family (aconitate hydratase) DN407_06930 PF00694 Aconitase C-terminal domain DN407_06935 PF13393 Histidyl-tRNA synthetase DN407_06940 PF01634 ATP phosphoribosyltransferase DN407_06945 PF00815 Histidinol dehydrogenase DN407_06950 PF00475 Imidazoleglycerol-phosphate dehydratase DN407_06955 PF00117 Glutamine amidotransferase class-I DN407_06960 PF00977 Histidine biosynthesis protein DN407_06965 PF00977 Histidine biosynthesis protein DN407_06970 PF01502 Phosphoribosyl-AMP cyclohydrolase DN407_06975 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DN407_06980 PF02811 PHP domain DN407_06990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN407_06990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN407_06995 PF01066 CDP-alcohol phosphatidyltransferase DN407_07000 PF00884 Sulfatase DN407_07010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN407_07010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN407_07020 PF01507 Phosphoadenosine phosphosulfate reductase family DN407_07025 PF01747 ATP-sulfurylase DN407_07025 PF14306 PUA-like domain DN407_07035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN407_07035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN407_07045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN407_07050 PF01903 CbiX DN407_07060 PF00209 Sodium:neurotransmitter symporter family DN407_07070 PF00375 Sodium:dicarboxylate symporter family DN407_07080 PF03553 Na+/H+ antiporter family DN407_07095 PF09922 Cell wall-active antibiotics response 4TMS YvqF DN407_07100 PF00672 HAMP domain DN407_07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_07100 PF07730 Histidine kinase DN407_07105 PF00072 Response regulator receiver domain DN407_07105 PF00196 Bacterial regulatory proteins, luxR family DN407_07115 PF05525 Branched-chain amino acid transport protein DN407_07125 PF01209 ubiE/COQ5 methyltransferase family DN407_07150 PF00042 Globin DN407_07150 PF00970 Oxidoreductase FAD-binding domain DN407_07150 PF00175 Oxidoreductase NAD-binding domain DN407_07165 PF01925 Sulfite exporter TauE/SafE DN407_07170 PF01384 Phosphate transporter family DN407_07175 PF01865 Protein of unknown function DUF47 DN407_07180 PF00912 Transglycosylase DN407_07180 PF00905 Penicillin binding protein transpeptidase domain DN407_07195 PF00989 PAS fold DN407_07195 PF00512 His Kinase A (phospho-acceptor) domain DN407_07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_07200 PF01904 Protein of unknown function DUF72 DN407_07210 PF00589 Phage integrase family DN407_07215 PF00989 PAS fold DN407_07215 PF16736 Single Cache-like DN407_07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_07215 PF00512 His Kinase A (phospho-acceptor) domain DN407_07225 PF01048 Phosphorylase superfamily DN407_07235 PF03706 Lysylphosphatidylglycerol synthase TM region DN407_07235 PF09924 Uncharacterised conserved protein (DUF2156) DN407_07250 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN407_07250 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN407_07255 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_07255 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_07260 PF07670 Nucleoside recognition DN407_07265 PF07670 Nucleoside recognition DN407_07270 PF00849 RNA pseudouridylate synthase DN407_07270 PF01479 S4 domain DN407_07275 PF00578 AhpC/TSA family DN407_07280 PF05140 ResB-like family DN407_07285 PF01578 Cytochrome C assembly protein DN407_07290 PF00486 Transcriptional regulatory protein, C terminal DN407_07290 PF00072 Response regulator receiver domain DN407_07295 PF00989 PAS fold DN407_07295 PF00512 His Kinase A (phospho-acceptor) domain DN407_07295 PF18698 Histidine kinase sensor domain DN407_07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_07295 PF00672 HAMP domain DN407_07300 PF01923 Cobalamin adenosyltransferase DN407_07315 PF12822 ECF transporter, substrate-specific component DN407_07330 PF00270 DEAD/DEAH box helicase DN407_07330 PF00271 Helicase conserved C-terminal domain DN407_07335 PF02517 CPBP intramembrane metalloprotease DN407_07345 PF00149 Calcineurin-like phosphoesterase DN407_07350 PF13411 MerR HTH family regulatory protein DN407_07355 PF05389 Negative regulator of genetic competence (MecA) DN407_07360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN407_07360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN407_07385 PF17763 Glutaminase/Asparaginase C-terminal domain DN407_07385 PF00710 Asparaginase, N-terminal DN407_07390 PF02224 Cytidylate kinase DN407_07395 PF00575 S1 RNA binding domain DN407_07400 PF01070 FMN-dependent dehydrogenase DN407_07405 PF14140 YpzI-like protein DN407_07415 PF14045 YIEGIA protein DN407_07425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DN407_07425 PF01926 50S ribosome-binding GTPase DN407_07430 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DN407_07430 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DN407_07440 PF10966 Protein of unknown function (DUF2768) DN407_07450 PF09547 Stage IV sporulation protein A (spore_IV_A) DN407_07455 PF00216 Bacterial DNA-binding protein DN407_07460 PF01227 GTP cyclohydrolase I DN407_07465 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DN407_07470 PF01209 ubiE/COQ5 methyltransferase family DN407_07475 PF00348 Polyprenyl synthetase DN407_07480 PF00334 Nucleoside diphosphate kinase DN407_07485 PF01264 Chorismate synthase DN407_07490 PF01761 3-dehydroquinate synthase DN407_07495 PF00155 Aminotransferase class I and II DN407_07505 PF08858 IDEAL domain DN407_07505 PF08864 UPF0302 domain DN407_07510 PF10673 Protein of unknown function (DUF2487) DN407_07515 PF00355 Rieske [2Fe-2S] domain DN407_07520 PF00033 Cytochrome b/b6/petB DN407_07525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN407_07525 PF00032 Cytochrome b(C-terminal)/b6/petD DN407_07530 PF07187 Protein of unknown function (DUF1405) DN407_07540 PF09577 Sporulation protein YpjB (SpoYpjB) DN407_07545 PF04298 Putative neutral zinc metallopeptidase DN407_07555 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_07555 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_07565 PF03819 MazG nucleotide pyrophosphohydrolase domain DN407_07570 PF01113 Dihydrodipicolinate reductase, N-terminus DN407_07570 PF05173 Dihydrodipicolinate reductase, C-terminus DN407_07575 PF02142 MGS-like domain DN407_07580 PF02585 GlcNAc-PI de-N-acetylase DN407_07585 PF13439 Glycosyltransferase Family 4 DN407_07585 PF00534 Glycosyl transferases group 1 DN407_07590 PF13735 tRNA nucleotidyltransferase domain 2 putative DN407_07590 PF12627 Probable RNA and SrmB- binding site of polymerase A DN407_07590 PF01743 Poly A polymerase head domain DN407_07595 PF08279 HTH domain DN407_07595 PF03099 Biotin/lipoate A/B protein ligase family DN407_07595 PF02237 Biotin protein ligase C terminal domain DN407_07610 PF02548 Ketopantoate hydroxymethyltransferase DN407_07615 PF02569 Pantoate-beta-alanine ligase DN407_07620 PF02261 Aspartate decarboxylase DN407_07625 PF00929 Exonuclease DN407_07625 PF04851 Type III restriction enzyme, res subunit DN407_07625 PF13307 Helicase C-terminal domain DN407_07630 PF14084 Protein of unknown function (DUF4264) DN407_07640 PF00155 Aminotransferase class I and II DN407_07645 PF07261 Replication initiation and membrane attachment DN407_07650 PF00730 HhH-GPD superfamily base excision DNA repair protein DN407_07650 PF00633 Helix-hairpin-helix motif DN407_07650 PF10576 Iron-sulfur binding domain of endonuclease III DN407_07660 PF00912 Transglycosylase DN407_07660 PF00905 Penicillin binding protein transpeptidase domain DN407_07665 PF03838 Recombination protein U DN407_07670 PF10720 Protein of unknown function (DUF2515) DN407_07700 PF06908 YspA SLOG family DN407_07705 PF05103 DivIVA protein DN407_07715 PF01170 Putative RNA methylase family UPF0020 DN407_07715 PF02926 THUMP domain DN407_07725 PF13307 Helicase C-terminal domain DN407_07730 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DN407_07740 PF00557 Metallopeptidase family M24 DN407_07745 PF00156 Phosphoribosyl transferase domain DN407_07750 PF00860 Permease family DN407_07755 PF04235 Protein of unknown function (DUF418) DN407_07760 PF00350 Dynamin family DN407_07770 PF00583 Acetyltransferase (GNAT) family DN407_07775 PF10752 Protein of unknown function (DUF2533) DN407_07780 PF00581 Rhodanese-like domain DN407_07820 PF00689 Cation transporting ATPase, C-terminus DN407_07820 PF00690 Cation transporter/ATPase, N-terminus DN407_07825 PF01367 5'-3' exonuclease, C-terminal SAM fold DN407_07825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN407_07840 PF02706 Chain length determinant protein DN407_07840 PF13807 G-rich domain on putative tyrosine kinase DN407_07850 PF02397 Bacterial sugar transferase DN407_07865 PF00535 Glycosyl transferase family 2 DN407_07870 PF00534 Glycosyl transferases group 1 DN407_07870 PF13439 Glycosyltransferase Family 4 DN407_07885 PF18014 Acetyltransferase (GNAT) domain DN407_07885 PF13673 Acetyltransferase (GNAT) domain DN407_07905 PF13456 Reverse transcriptase-like DN407_07910 PF01263 Aldose 1-epimerase DN407_07935 PF00313 'Cold-shock' DNA-binding domain DN407_07940 PF08892 YqcI/YcgG family DN407_07945 PF01810 LysE type translocator DN407_07965 PF00474 Sodium:solute symporter family DN407_07970 PF00202 Aminotransferase class-III DN407_07980 PF00999 Sodium/hydrogen exchanger family DN407_07985 PF17770 Ribonuclease J C-terminal domain DN407_07985 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN407_07985 PF00753 Metallo-beta-lactamase superfamily DN407_07990 PF13411 MerR HTH family regulatory protein DN407_07990 PF06445 GyrI-like small molecule binding domain DN407_08000 PF04239 Protein of unknown function (DUF421) DN407_08005 PF02698 DUF218 domain DN407_08015 PF00881 Nitroreductase family DN407_08045 PF17209 Hfq protein DN407_08055 PF01618 MotA/TolQ/ExbB proton channel family DN407_08060 PF00691 OmpA family DN407_08060 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN407_08065 PF00072 Response regulator receiver domain DN407_08070 PF01627 Hpt domain DN407_08070 PF07194 P2 response regulator binding domain DN407_08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_08070 PF02895 Signal transducing histidine kinase, homodimeric domain DN407_08070 PF01584 CheW-like domain DN407_08075 PF04509 CheC-like family DN407_08075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN407_08090 PF01739 CheR methyltransferase, SAM binding domain DN407_08090 PF03705 CheR methyltransferase, all-alpha domain DN407_08110 PF00460 Flagella basal body rod protein DN407_08110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN407_08115 PF00669 Bacterial flagellin N-terminal helical region DN407_08115 PF00700 Bacterial flagellin C-terminal helical region DN407_08135 PF00460 Flagella basal body rod protein DN407_08140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN407_08140 PF00460 Flagella basal body rod protein DN407_08145 PF02049 Flagellar hook-basal body complex protein FliE DN407_08150 PF08345 Flagellar M-ring protein C-terminal DN407_08150 PF01514 Secretory protein of YscJ/FliF family DN407_08155 PF14842 FliG N-terminal domain DN407_08155 PF14841 FliG middle domain DN407_08155 PF01706 FliG C-terminal domain DN407_08165 PF18269 T3SS EscN ATPase C-terminal domain DN407_08165 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN407_08165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN407_08185 PF07559 Flagellar basal body protein FlaE DN407_08185 PF00460 Flagella basal body rod protein DN407_08185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN407_08200 PF00072 Response regulator receiver domain DN407_08200 PF01584 CheW-like domain DN407_08210 PF12181 DNA binding domain of the motility gene repressor (MogR) DN407_08215 PF00700 Bacterial flagellin C-terminal helical region DN407_08215 PF00669 Bacterial flagellin N-terminal helical region DN407_08220 PF00700 Bacterial flagellin C-terminal helical region DN407_08220 PF00669 Bacterial flagellin N-terminal helical region DN407_08225 PF00700 Bacterial flagellin C-terminal helical region DN407_08225 PF00669 Bacterial flagellin N-terminal helical region DN407_08230 PF00669 Bacterial flagellin N-terminal helical region DN407_08230 PF00700 Bacterial flagellin C-terminal helical region DN407_08235 PF01464 Transglycosylase SLT domain DN407_08245 PF02154 Flagellar motor switch protein FliM DN407_08245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN407_08250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN407_08250 PF04509 CheC-like family DN407_08260 PF00813 FliP family DN407_08265 PF01313 Bacterial export proteins, family 3 DN407_08275 PF01312 FlhB HrpN YscU SpaS Family DN407_08280 PF00771 FHIPEP family DN407_08285 PF00448 SRP54-type protein, GTPase domain DN407_08290 PF00460 Flagella basal body rod protein DN407_08290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN407_08295 PF01411 tRNA synthetases class II (A) DN407_08295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN407_08295 PF02272 DHHA1 domain DN407_08330 PF03992 Antibiotic biosynthesis monooxygenase DN407_08335 PF08141 Small acid-soluble spore protein H family DN407_08360 PF00005 ABC transporter DN407_08360 PF08402 TOBE domain DN407_08370 PF00528 Binding-protein-dependent transport system inner membrane component DN407_08385 PF10787 Uncharacterised protein from bacillus cereus group DN407_08415 PF00561 alpha/beta hydrolase fold DN407_08425 PF01047 MarR family DN407_08435 PF00733 Asparagine synthase DN407_08435 PF13537 Glutamine amidotransferase domain DN407_08455 PF01545 Cation efflux family DN407_08455 PF16916 Dimerisation domain of Zinc Transporter DN407_08465 PF00392 Bacterial regulatory proteins, gntR family DN407_08465 PF07729 FCD domain DN407_08470 PF00892 EamA-like transporter family DN407_08480 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN407_08480 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN407_08490 PF03773 Predicted permease DN407_08505 PF03553 Na+/H+ antiporter family DN407_08510 PF13411 MerR HTH family regulatory protein DN407_08520 PF10415 Fumarase C C-terminus DN407_08520 PF00206 Lyase DN407_08535 PF01554 MatE DN407_08540 PF03575 Peptidase family S51 DN407_08560 PF00578 AhpC/TSA family DN407_08565 PF01790 Prolipoprotein diacylglyceryl transferase DN407_08570 PF18801 response regulator aspartate phosphatase H, N terminal DN407_08585 PF00291 Pyridoxal-phosphate dependent enzyme DN407_08590 PF04286 Protein of unknown function (DUF445) DN407_08620 PF00196 Bacterial regulatory proteins, luxR family DN407_08620 PF00072 Response regulator receiver domain DN407_08625 PF13185 GAF domain DN407_08625 PF07730 Histidine kinase DN407_08625 PF13492 GAF domain DN407_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_08630 PF00005 ABC transporter DN407_08650 PF13091 PLD-like domain DN407_08655 PF00696 Amino acid kinase family DN407_08660 PF00375 Sodium:dicarboxylate symporter family DN407_08665 PF00206 Lyase DN407_08665 PF10415 Fumarase C C-terminus DN407_08670 PF00390 Malic enzyme, N-terminal domain DN407_08670 PF03949 Malic enzyme, NAD binding domain DN407_08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_08680 PF08664 YcbB domain DN407_08680 PF00072 Response regulator receiver domain DN407_08685 PF00176 SNF2 family N-terminal domain DN407_08685 PF00271 Helicase conserved C-terminal domain DN407_08685 PF04434 SWIM zinc finger DN407_08700 PF03590 Aspartate-ammonia ligase DN407_08710 PF13840 ACT domain DN407_08710 PF00696 Amino acid kinase family DN407_08725 PF13761 Domain of unknown function (DUF4166) DN407_08730 PF14158 YndJ-like protein DN407_08735 PF00293 NUDIX domain DN407_08735 PF09297 NADH pyrophosphatase zinc ribbon domain DN407_08740 PF07690 Major Facilitator Superfamily DN407_08755 PF03976 Polyphosphate kinase 2 (PPK2) DN407_08760 PF03551 Transcriptional regulator PadR-like family DN407_08760 PF10400 Virulence activator alpha C-term DN407_08765 PF07690 Major Facilitator Superfamily DN407_08770 PF07690 Major Facilitator Superfamily DN407_08775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN407_08775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN407_08780 PF16360 GTP-binding GTPase Middle Region DN407_08780 PF13167 GTP-binding GTPase N-terminal DN407_08780 PF01926 50S ribosome-binding GTPase DN407_08785 PF07690 Major Facilitator Superfamily DN407_08790 PF00291 Pyridoxal-phosphate dependent enzyme DN407_08810 PF00209 Sodium:neurotransmitter symporter family DN407_08820 PF04239 Protein of unknown function (DUF421) DN407_08840 PF01625 Peptide methionine sulfoxide reductase DN407_08850 PF01063 Amino-transferase class IV DN407_08855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN407_08855 PF00205 Thiamine pyrophosphate enzyme, central domain DN407_08855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_08865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN407_08865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN407_08870 PF00920 Dehydratase family DN407_08875 PF00585 C-terminal regulatory domain of Threonine dehydratase DN407_08875 PF00291 Pyridoxal-phosphate dependent enzyme DN407_08885 PF09587 Bacterial capsule synthesis protein PGA_cap DN407_08900 PF07690 Major Facilitator Superfamily DN407_08905 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN407_08915 PF04397 LytTr DNA-binding domain DN407_08915 PF00072 Response regulator receiver domain DN407_08920 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DN407_08920 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DN407_08925 PF13673 Acetyltransferase (GNAT) domain DN407_08935 PF01979 Amidohydrolase family DN407_08940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_08945 PF13302 Acetyltransferase (GNAT) domain DN407_08950 PF01566 Natural resistance-associated macrophage protein DN407_08965 PF02558 Ketopantoate reductase PanE/ApbA DN407_08965 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN407_08970 PF13520 Amino acid permease DN407_08980 PF05791 Bacillus haemolytic enterotoxin (HBL) DN407_08985 PF05791 Bacillus haemolytic enterotoxin (HBL) DN407_08995 PF01906 Putative heavy-metal-binding DN407_09005 PF00440 Bacterial regulatory proteins, tetR family DN407_09010 PF04198 Putative sugar-binding domain DN407_09015 PF01791 DeoC/LacD family aldolase DN407_09020 PF07662 Na+ dependent nucleoside transporter C-terminus DN407_09020 PF01773 Na+ dependent nucleoside transporter N-terminus DN407_09025 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN407_09025 PF02885 Glycosyl transferase family, helical bundle domain DN407_09025 PF00591 Glycosyl transferase family, a/b domain DN407_09030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN407_09040 PF07301 Protein of unknown function (DUF1453) DN407_09045 PF05979 Bacterial protein of unknown function (DUF896) DN407_09065 PF05195 Aminopeptidase P, N-terminal domain DN407_09065 PF00557 Metallopeptidase family M24 DN407_09075 PF07731 Multicopper oxidase DN407_09075 PF07732 Multicopper oxidase DN407_09075 PF00394 Multicopper oxidase DN407_09105 PF02525 Flavodoxin-like fold DN407_09110 PF05525 Branched-chain amino acid transport protein DN407_09115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_09125 PF04234 CopC domain DN407_09125 PF05425 Copper resistance protein D DN407_09125 PF13115 YtkA-like DN407_09130 PF07987 Domain of unkown function (DUF1775) DN407_09135 PF00892 EamA-like transporter family DN407_09140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_09140 PF03466 LysR substrate binding domain DN407_09145 PF02082 Transcriptional regulator DN407_09150 PF01323 DSBA-like thioredoxin domain DN407_09155 PF00881 Nitroreductase family DN407_09160 PF01425 Amidase DN407_09165 PF01594 AI-2E family transporter DN407_09170 PF00056 lactate/malate dehydrogenase, NAD binding domain DN407_09170 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN407_09175 PF01593 Flavin containing amine oxidoreductase DN407_09185 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN407_09185 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN407_09195 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN407_09195 PF00005 ABC transporter DN407_09200 PF00005 ABC transporter DN407_09205 PF02653 Branched-chain amino acid transport system / permease component DN407_09215 PF03466 LysR substrate binding domain DN407_09215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_09225 PF14552 Tautomerase enzyme DN407_09230 PF01047 MarR family DN407_09240 PF01654 Cytochrome bd terminal oxidase subunit I DN407_09245 PF02322 Cytochrome bd terminal oxidase subunit II DN407_09250 PF00005 ABC transporter DN407_09250 PF00664 ABC transporter transmembrane region DN407_09255 PF00005 ABC transporter DN407_09255 PF00664 ABC transporter transmembrane region DN407_09265 PF00535 Glycosyl transferase family 2 DN407_09270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN407_09275 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_09300 PF17676 LD-carboxypeptidase C-terminal domain DN407_09300 PF02016 LD-carboxypeptidase N-terminal domain DN407_09305 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_09305 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_09320 PF01476 LysM domain DN407_09320 PF00877 NlpC/P60 family DN407_09330 PF00664 ABC transporter transmembrane region DN407_09330 PF00005 ABC transporter DN407_09335 PF00072 Response regulator receiver domain DN407_09335 PF00486 Transcriptional regulatory protein, C terminal DN407_09340 PF16736 Single Cache-like DN407_09340 PF00989 PAS fold DN407_09340 PF00512 His Kinase A (phospho-acceptor) domain DN407_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_09345 PF00106 short chain dehydrogenase DN407_09350 PF04439 Streptomycin adenylyltransferase DN407_09355 PF01522 Polysaccharide deacetylase DN407_09355 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DN407_09375 PF01842 ACT domain DN407_09375 PF00742 Homoserine dehydrogenase DN407_09375 PF03447 Homoserine dehydrogenase, NAD binding domain DN407_09380 PF00291 Pyridoxal-phosphate dependent enzyme DN407_09385 PF00288 GHMP kinases N terminal domain DN407_09385 PF08544 GHMP kinases C terminal DN407_09400 PF03816 Cell envelope-related transcriptional attenuator domain DN407_09410 PF00486 Transcriptional regulatory protein, C terminal DN407_09410 PF00072 Response regulator receiver domain DN407_09415 PF00512 His Kinase A (phospho-acceptor) domain DN407_09415 PF16736 Single Cache-like DN407_09415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_09415 PF00989 PAS fold DN407_09420 PF01522 Polysaccharide deacetylase DN407_09430 PF02308 MgtC family DN407_09435 PF00583 Acetyltransferase (GNAT) family DN407_09440 PF06276 Ferric iron reductase FhuF-like transporter DN407_09440 PF04183 IucA / IucC family DN407_09445 PF06276 Ferric iron reductase FhuF-like transporter DN407_09445 PF04183 IucA / IucC family DN407_09450 PF00501 AMP-binding enzyme DN407_09450 PF13193 AMP-binding enzyme C-terminal domain DN407_09465 PF01261 Xylose isomerase-like TIM barrel DN407_09470 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_09475 PF07690 Major Facilitator Superfamily DN407_09480 PF01810 LysE type translocator DN407_09485 PF00155 Aminotransferase class I and II DN407_09485 PF00392 Bacterial regulatory proteins, gntR family DN407_09495 PF01734 Patatin-like phospholipase DN407_09520 PF00293 NUDIX domain DN407_09520 PF13344 Haloacid dehalogenase-like hydrolase DN407_09525 PF02540 NAD synthase DN407_09530 PF02687 FtsX-like permease family DN407_09535 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN407_09535 PF18277 AbrB C-terminal domain DN407_09540 PF00082 Subtilase family DN407_09570 PF03193 RsgA GTPase DN407_09575 PF00672 HAMP domain DN407_09575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_09575 PF02743 Cache domain DN407_09595 PF00210 Ferritin-like domain DN407_09610 PF00296 Luciferase-like monooxygenase DN407_09620 PF01593 Flavin containing amine oxidoreductase DN407_09625 PF13302 Acetyltransferase (GNAT) domain DN407_09630 PF00248 Aldo/keto reductase family DN407_09635 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN407_09635 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN407_09640 PF00583 Acetyltransferase (GNAT) family DN407_09645 PF01297 Zinc-uptake complex component A periplasmic DN407_09650 PF13460 NAD(P)H-binding DN407_09655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN407_09660 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN407_09660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN407_09670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_09675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_09685 PF00300 Histidine phosphatase superfamily (branch 1) DN407_09695 PF08757 CotH kinase protein DN407_09700 PF00293 NUDIX domain DN407_09705 PF09335 SNARE associated Golgi protein DN407_09710 PF14667 Polysaccharide biosynthesis C-terminal domain DN407_09710 PF01943 Polysaccharide biosynthesis protein DN407_09720 PF03773 Predicted permease DN407_09725 PF09323 Domain of unknown function (DUF1980) DN407_09730 PF03061 Thioesterase superfamily DN407_09740 PF13091 PLD-like domain DN407_09740 PF13396 Phospholipase_D-nuclease N-terminal DN407_09755 PF13460 NAD(P)H-binding DN407_09760 PF04306 Protein of unknown function (DUF456) DN407_09765 PF03471 Transporter associated domain DN407_09765 PF00571 CBS domain DN407_09765 PF01595 Cyclin M transmembrane N-terminal domain DN407_09780 PF05525 Branched-chain amino acid transport protein DN407_09785 PF01588 Putative tRNA binding domain DN407_09805 PF07454 Stage II sporulation protein P (SpoIIP) DN407_09815 PF02557 D-alanyl-D-alanine carboxypeptidase DN407_09825 PF01425 Amidase DN407_09830 PF07690 Major Facilitator Superfamily DN407_09840 PF01145 SPFH domain / Band 7 family DN407_09845 PF07454 Stage II sporulation protein P (SpoIIP) DN407_09850 PF00300 Histidine phosphatase superfamily (branch 1) DN407_09870 PF01168 Alanine racemase, N-terminal domain DN407_09870 PF00842 Alanine racemase, C-terminal domain DN407_09890 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN407_09895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_09895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_09900 PF00392 Bacterial regulatory proteins, gntR family DN407_09900 PF00155 Aminotransferase class I and II DN407_09930 PF00583 Acetyltransferase (GNAT) family DN407_09945 PF06013 Proteins of 100 residues with WXG DN407_09960 PF08817 WXG100 protein secretion system (Wss), protein YukD DN407_09965 PF10140 WXG100 protein secretion system (Wss), protein YukC DN407_09970 PF12538 DNA transporter DN407_09970 PF01580 FtsK/SpoIIIE family DN407_10040 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN407_10065 PF01209 ubiE/COQ5 methyltransferase family DN407_10070 PF01268 Formate--tetrahydrofolate ligase DN407_10080 PF00271 Helicase conserved C-terminal domain DN407_10080 PF00270 DEAD/DEAH box helicase DN407_10085 PF01261 Xylose isomerase-like TIM barrel DN407_10090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_10100 PF08240 Alcohol dehydrogenase GroES-like domain DN407_10100 PF00107 Zinc-binding dehydrogenase DN407_10105 PF08281 Sigma-70, region 4 DN407_10105 PF04542 Sigma-70 region 2 DN407_10130 PF00255 Glutathione peroxidase DN407_10135 PF11992 Domain of unknown function (DUF3488) DN407_10135 PF13559 Domain of unknown function (DUF4129) DN407_10135 PF01841 Transglutaminase-like superfamily DN407_10140 PF01882 Protein of unknown function DUF58 DN407_10145 PF17863 AAA lid domain DN407_10145 PF07726 ATPase family associated with various cellular activities (AAA) DN407_10150 PF14710 Respiratory nitrate reductase alpha N-terminal DN407_10150 PF01568 Molydopterin dinucleotide binding domain DN407_10150 PF00384 Molybdopterin oxidoreductase DN407_10155 PF14711 Respiratory nitrate reductase beta C-terminal DN407_10155 PF13247 4Fe-4S dicluster domain DN407_10160 PF02613 Nitrate reductase delta subunit DN407_10165 PF02665 Nitrate reductase gamma subunit DN407_10170 PF00027 Cyclic nucleotide-binding domain DN407_10170 PF00325 Bacterial regulatory proteins, crp family DN407_10175 PF06463 Molybdenum Cofactor Synthesis C DN407_10175 PF04055 Radical SAM superfamily DN407_10180 PF00899 ThiF family DN407_10185 PF00994 Probable molybdopterin binding domain DN407_10185 PF03454 MoeA C-terminal region (domain IV) DN407_10185 PF03453 MoeA N-terminal region (domain I and II) DN407_10190 PF02391 MoaE protein DN407_10195 PF02597 ThiS family DN407_10200 PF07690 Major Facilitator Superfamily DN407_10230 PF01903 CbiX DN407_10235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN407_10240 PF00355 Rieske [2Fe-2S] domain DN407_10245 PF18267 Rubredoxin NAD+ reductase C-terminal domain DN407_10245 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_10245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN407_10245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN407_10245 PF04324 BFD-like [2Fe-2S] binding domain DN407_10250 PF01814 Hemerythrin HHE cation binding domain DN407_10250 PF04405 Domain of Unknown function (DUF542) DN407_10285 PF04232 Stage V sporulation protein S (SpoVS) DN407_10305 PF18801 response regulator aspartate phosphatase H, N terminal DN407_10305 PF17874 MalT-like TPR region DN407_10320 PF01966 HD domain DN407_10325 PF12848 ABC transporter DN407_10325 PF00005 ABC transporter DN407_10325 PF16326 ABC transporter C-terminal domain DN407_10340 PF00436 Single-strand binding protein family DN407_10350 PF13769 Virulence factor DN407_10350 PF08712 Scaffold protein Nfu/NifU N terminal DN407_10360 PF06491 Disulphide isomerase DN407_10365 PF04445 Putative SAM-dependent methyltransferase DN407_10370 PF05746 DALR anticodon binding domain DN407_10370 PF00750 tRNA synthetases class I (R) DN407_10370 PF03485 Arginyl tRNA synthetase N terminal domain DN407_10395 PF00133 tRNA synthetases class I (I, L, M and V) DN407_10395 PF08264 Anticodon-binding domain of tRNA DN407_10425 PF00152 tRNA synthetases class II (D, K and N) DN407_10425 PF01336 OB-fold nucleic acid binding domain DN407_10430 PF00209 Sodium:neurotransmitter symporter family DN407_10445 PF10997 Alternate to MurJ DN407_10450 PF13419 Haloacid dehalogenase-like hydrolase DN407_10460 PF00465 Iron-containing alcohol dehydrogenase DN407_10465 PF01177 Asp/Glu/Hydantoin racemase DN407_10470 PF01980 tRNA-methyltransferase O DN407_10475 PF00583 Acetyltransferase (GNAT) family DN407_10480 PF11188 Protein of unknown function (DUF2975) DN407_10485 PF13443 Cro/C1-type HTH DNA-binding domain DN407_10490 PF08645 Polynucleotide kinase 3 phosphatase DN407_10500 PF00005 ABC transporter DN407_10505 PF05975 Bacterial ABC transporter protein EcsB DN407_10510 PF14005 YpjP-like protein DN407_10515 PF13419 Haloacid dehalogenase-like hydrolase DN407_10530 PF07930 D-aminopeptidase, domain B DN407_10530 PF00144 Beta-lactamase DN407_10535 PF00303 Thymidylate synthase DN407_10540 PF00186 Dihydrofolate reductase DN407_10545 PF03717 Penicillin-binding Protein dimerisation domain DN407_10545 PF00905 Penicillin binding protein transpeptidase domain DN407_10545 PF05223 NTF2-like N-terminal transpeptidase domain DN407_10550 PF02525 Flavodoxin-like fold DN407_10555 PF01553 Acyltransferase DN407_10560 PF03006 Haemolysin-III related DN407_10565 PF02416 mttA/Hcf106 family DN407_10570 PF00902 Sec-independent protein translocase protein (TatC) DN407_10580 PF02645 Uncharacterised protein, DegV family COG1307 DN407_10590 PF02630 SCO1/SenC DN407_10595 PF00011 Hsp20/alpha crystallin family DN407_10600 PF00733 Asparagine synthase DN407_10600 PF13537 Glutamine amidotransferase domain DN407_10615 PF05036 Sporulation related domain DN407_10615 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_10620 PF01497 Periplasmic binding protein DN407_10625 PF01063 Amino-transferase class IV DN407_10630 PF00881 Nitroreductase family DN407_10645 PF00857 Isochorismatase family DN407_10655 PF00011 Hsp20/alpha crystallin family DN407_10660 PF00924 Mechanosensitive ion channel DN407_10665 PF13185 GAF domain DN407_10665 PF07730 Histidine kinase DN407_10670 PF00196 Bacterial regulatory proteins, luxR family DN407_10670 PF00072 Response regulator receiver domain DN407_10675 PF01418 Helix-turn-helix domain, rpiR family DN407_10675 PF01380 SIS domain DN407_10680 PF02567 Phenazine biosynthesis-like protein DN407_10685 PF00107 Zinc-binding dehydrogenase DN407_10685 PF08240 Alcohol dehydrogenase GroES-like domain DN407_10700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN407_10700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN407_10705 PF02447 GntP family permease DN407_10710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN407_10710 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN407_10730 PF03358 NADPH-dependent FMN reductase DN407_10745 PF00005 ABC transporter DN407_10745 PF00571 CBS domain DN407_10750 PF00528 Binding-protein-dependent transport system inner membrane component DN407_10755 PF13520 Amino acid permease DN407_10785 PF01595 Cyclin M transmembrane N-terminal domain DN407_10785 PF03471 Transporter associated domain DN407_10785 PF00571 CBS domain DN407_10790 PF00171 Aldehyde dehydrogenase family DN407_10795 PF07997 Protein of unknown function (DUF1694) DN407_10800 PF09385 Histidine kinase N terminal DN407_10810 PF00202 Aminotransferase class-III DN407_10815 PF01144 Coenzyme A transferase DN407_10820 PF01144 Coenzyme A transferase DN407_10825 PF01546 Peptidase family M20/M25/M40 DN407_10825 PF07687 Peptidase dimerisation domain DN407_10830 PF00583 Acetyltransferase (GNAT) family DN407_10835 PF00158 Sigma-54 interaction domain DN407_10835 PF02954 Bacterial regulatory protein, Fis family DN407_10835 PF13426 PAS domain DN407_10840 PF12544 Lysine-2,3-aminomutase DN407_10845 PF14122 YokU-like protein, putative antitoxin DN407_10850 PF06855 YozE SAM-like fold DN407_10865 PF14162 YozD-like protein DN407_10875 PF08239 Bacterial SH3 domain DN407_10875 PF00069 Protein kinase domain DN407_10885 PF01569 PAP2 superfamily DN407_10890 PF16916 Dimerisation domain of Zinc Transporter DN407_10890 PF01545 Cation efflux family DN407_10895 PF00085 Thioredoxin DN407_10950 PF10676 Spore germination protein gerPA/gerPF DN407_10965 PF00106 short chain dehydrogenase DN407_10985 PF00905 Penicillin binding protein transpeptidase domain DN407_10985 PF00912 Transglycosylase DN407_10995 PF07690 Major Facilitator Superfamily DN407_11000 PF01521 Iron-sulphur cluster biosynthesis DN407_11005 PF00285 Citrate synthase, C-terminal domain DN407_11010 PF03972 MmgE/PrpD family DN407_11020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN407_11020 PF02770 Acyl-CoA dehydrogenase, middle domain DN407_11020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN407_11025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN407_11025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN407_11030 PF00171 Aldehyde dehydrogenase family DN407_11035 PF01810 LysE type translocator DN407_11040 PF00378 Enoyl-CoA hydratase/isomerase DN407_11055 PF00149 Calcineurin-like phosphoesterase DN407_11055 PF12320 Type 5 capsule protein repressor C-terminal domain DN407_11060 PF13476 AAA domain DN407_11065 PF01022 Bacterial regulatory protein, arsR family DN407_11075 PF07690 Major Facilitator Superfamily DN407_11080 PF00106 short chain dehydrogenase DN407_11085 PF00425 chorismate binding enzyme DN407_11090 PF00501 AMP-binding enzyme DN407_11090 PF13193 AMP-binding enzyme C-terminal domain DN407_11095 PF00857 Isochorismatase family DN407_11095 PF00550 Phosphopantetheine attachment site DN407_11100 PF00668 Condensation domain DN407_11100 PF13193 AMP-binding enzyme C-terminal domain DN407_11100 PF00501 AMP-binding enzyme DN407_11100 PF00975 Thioesterase domain DN407_11100 PF00550 Phosphopantetheine attachment site DN407_11105 PF03621 MbtH-like protein DN407_11110 PF07690 Major Facilitator Superfamily DN407_11125 PF00216 Bacterial DNA-binding protein DN407_11135 PF05163 DinB family DN407_11140 PF00082 Subtilase family DN407_11145 PF01235 Sodium:alanine symporter family DN407_11165 PF01479 S4 domain DN407_11165 PF00849 RNA pseudouridylate synthase DN407_11170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN407_11170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN407_11170 PF02824 TGS domain DN407_11170 PF03129 Anticodon binding domain DN407_11175 PF00005 ABC transporter DN407_11190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN407_11190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_11190 PF00205 Thiamine pyrophosphate enzyme, central domain DN407_11230 PF00027 Cyclic nucleotide-binding domain DN407_11240 PF00561 alpha/beta hydrolase fold DN407_11260 PF03176 MMPL family DN407_11270 PF00302 Chloramphenicol acetyltransferase DN407_11285 PF00583 Acetyltransferase (GNAT) family DN407_11320 PF13302 Acetyltransferase (GNAT) domain DN407_11330 PF00313 'Cold-shock' DNA-binding domain DN407_11350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_11350 PF03466 LysR substrate binding domain DN407_11355 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN407_11355 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN407_11375 PF03466 LysR substrate binding domain DN407_11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_11380 PF03475 3-alpha domain DN407_11380 PF03473 MOSC domain DN407_11395 PF00005 ABC transporter DN407_11395 PF00664 ABC transporter transmembrane region DN407_11400 PF00664 ABC transporter transmembrane region DN407_11400 PF00005 ABC transporter DN407_11425 PF01810 LysE type translocator DN407_11430 PF01381 Helix-turn-helix DN407_11430 PF07883 Cupin domain DN407_11490 PF02638 Glycosyl hydrolase-like 10 DN407_11500 PF02378 Phosphotransferase system, EIIC DN407_11510 PF03702 Anhydro-N-acetylmuramic acid kinase DN407_11515 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN407_11520 PF02660 Glycerol-3-phosphate acyltransferase DN407_11525 PF00266 Aminotransferase class-V DN407_11530 PF00291 Pyridoxal-phosphate dependent enzyme DN407_11535 PF01047 MarR family DN407_11540 PF07690 Major Facilitator Superfamily DN407_11550 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN407_11550 PF00753 Metallo-beta-lactamase superfamily DN407_11555 PF00270 DEAD/DEAH box helicase DN407_11555 PF00271 Helicase conserved C-terminal domain DN407_11565 PF00440 Bacterial regulatory proteins, tetR family DN407_11565 PF17932 Tetracyclin repressor-like, C-terminal domain DN407_11585 PF03848 Tellurite resistance protein TehB DN407_11585 PF09313 Domain of unknown function (DUF1971) DN407_11595 PF08241 Methyltransferase domain DN407_11600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_11600 PF00205 Thiamine pyrophosphate enzyme, central domain DN407_11600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN407_11605 PF01047 MarR family DN407_11610 PF00300 Histidine phosphatase superfamily (branch 1) DN407_11615 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DN407_11635 PF01546 Peptidase family M20/M25/M40 DN407_11635 PF07687 Peptidase dimerisation domain DN407_11650 PF00196 Bacterial regulatory proteins, luxR family DN407_11650 PF00072 Response regulator receiver domain DN407_11660 PF18277 AbrB C-terminal domain DN407_11660 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN407_11670 PF01925 Sulfite exporter TauE/SafE DN407_11675 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_11680 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_11680 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_11695 PF07690 Major Facilitator Superfamily DN407_11700 PF00550 Phosphopantetheine attachment site DN407_11700 PF13193 AMP-binding enzyme C-terminal domain DN407_11700 PF00501 AMP-binding enzyme DN407_11700 PF00668 Condensation domain DN407_11705 PF00550 Phosphopantetheine attachment site DN407_11705 PF13193 AMP-binding enzyme C-terminal domain DN407_11705 PF00668 Condensation domain DN407_11705 PF07993 Male sterility protein DN407_11705 PF00501 AMP-binding enzyme DN407_11710 PF00550 Phosphopantetheine attachment site DN407_11710 PF00668 Condensation domain DN407_11710 PF13193 AMP-binding enzyme C-terminal domain DN407_11710 PF00501 AMP-binding enzyme DN407_11715 PF01648 4'-phosphopantetheinyl transferase superfamily DN407_11720 PF00975 Thioesterase domain DN407_11750 PF05139 Erythromycin esterase DN407_11760 PF13302 Acetyltransferase (GNAT) domain DN407_11770 PF00395 S-layer homology domain DN407_11770 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_11775 PF01381 Helix-turn-helix DN407_11790 PF01522 Polysaccharide deacetylase DN407_11795 PF00440 Bacterial regulatory proteins, tetR family DN407_11795 PF17932 Tetracyclin repressor-like, C-terminal domain DN407_11800 PF13537 Glutamine amidotransferase domain DN407_11800 PF00733 Asparagine synthase DN407_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_11805 PF13492 GAF domain DN407_11805 PF07730 Histidine kinase DN407_11810 PF00072 Response regulator receiver domain DN407_11810 PF00196 Bacterial regulatory proteins, luxR family DN407_11815 PF02225 PA domain DN407_11815 PF00082 Subtilase family DN407_11815 PF05922 Peptidase inhibitor I9 DN407_11815 PF13860 FlgD Ig-like domain DN407_11830 PF01734 Patatin-like phospholipase DN407_11830 PF00027 Cyclic nucleotide-binding domain DN407_11845 PF01842 ACT domain DN407_11845 PF03315 Serine dehydratase beta chain DN407_11850 PF03313 Serine dehydratase alpha chain DN407_11885 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN407_11910 PF00905 Penicillin binding protein transpeptidase domain DN407_11910 PF05223 NTF2-like N-terminal transpeptidase domain DN407_11910 PF03717 Penicillin-binding Protein dimerisation domain DN407_11915 PF04542 Sigma-70 region 2 DN407_11915 PF08281 Sigma-70, region 4 DN407_11925 PF00905 Penicillin binding protein transpeptidase domain DN407_11925 PF03717 Penicillin-binding Protein dimerisation domain DN407_11940 PF00149 Calcineurin-like phosphoesterase DN407_11950 PF00005 ABC transporter DN407_11960 PF08359 YsiA-like protein, C-terminal region DN407_11960 PF00440 Bacterial regulatory proteins, tetR family DN407_11975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN407_11975 PF02770 Acyl-CoA dehydrogenase, middle domain DN407_11975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN407_11980 PF02785 Biotin carboxylase C-terminal domain DN407_11980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN407_11980 PF00289 Biotin carboxylase, N-terminal domain DN407_11985 PF00364 Biotin-requiring enzyme DN407_11990 PF00682 HMGL-like DN407_11995 PF00378 Enoyl-CoA hydratase/isomerase DN407_12000 PF01039 Carboxyl transferase domain DN407_12005 PF16177 Acetyl-coenzyme A synthetase N-terminus DN407_12005 PF13193 AMP-binding enzyme C-terminal domain DN407_12005 PF00501 AMP-binding enzyme DN407_12055 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_12055 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_12060 PF00512 His Kinase A (phospho-acceptor) domain DN407_12065 PF00072 Response regulator receiver domain DN407_12065 PF00486 Transcriptional regulatory protein, C terminal DN407_12070 PF01966 HD domain DN407_12075 PF13021 Domain of unknown function (DUF3885) DN407_12080 PF01048 Phosphorylase superfamily DN407_12095 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN407_12095 PF07504 Fungalysin/Thermolysin Propeptide Motif DN407_12095 PF03413 Peptidase propeptide and YPEB domain DN407_12095 PF01447 Thermolysin metallopeptidase, catalytic domain DN407_12100 PF12833 Helix-turn-helix domain DN407_12100 PF17853 GGDEF-like domain DN407_12130 PF09278 MerR, DNA binding DN407_12130 PF00376 MerR family regulatory protein DN407_12140 PF01638 HxlR-like helix-turn-helix DN407_12155 PF14552 Tautomerase enzyme DN407_12160 PF03466 LysR substrate binding domain DN407_12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_12170 PF00005 ABC transporter DN407_12170 PF13732 Domain of unknown function (DUF4162) DN407_12200 PF00155 Aminotransferase class I and II DN407_12200 PF00392 Bacterial regulatory proteins, gntR family DN407_12210 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DN407_12210 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DN407_12235 PF04239 Protein of unknown function (DUF421) DN407_12240 PF01965 DJ-1/PfpI family DN407_12250 PF08450 SMP-30/Gluconolactonase/LRE-like region DN407_12265 PF07486 Cell Wall Hydrolase DN407_12275 PF00072 Response regulator receiver domain DN407_12275 PF00486 Transcriptional regulatory protein, C terminal DN407_12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_12295 PF00005 ABC transporter DN407_12300 PF02687 FtsX-like permease family DN407_12320 PF03447 Homoserine dehydrogenase, NAD binding domain DN407_12320 PF00742 Homoserine dehydrogenase DN407_12320 PF01842 ACT domain DN407_12325 PF00392 Bacterial regulatory proteins, gntR family DN407_12325 PF00155 Aminotransferase class I and II DN407_12330 PF01820 D-ala D-ala ligase N-terminus DN407_12330 PF07478 D-ala D-ala ligase C-terminus DN407_12335 PF03070 TENA/THI-4/PQQC family DN407_12365 PF14659 Phage integrase, N-terminal SAM-like domain DN407_12365 PF00589 Phage integrase family DN407_12390 PF01381 Helix-turn-helix DN407_12420 PF09588 YqaJ-like viral recombinase domain DN407_12425 PF03837 RecT family DN407_12450 PF08858 IDEAL domain DN407_12450 PF08864 UPF0302 domain DN407_12510 PF10676 Spore germination protein gerPA/gerPF DN407_12540 PF10668 Phage terminase small subunit DN407_12540 PF03592 Terminase small subunit DN407_12640 PF05105 Bacteriophage holin family DN407_12660 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_12665 PF11553 Protein of unknown function (DUF3231) DN407_12670 PF10710 Protein of unknown function (DUF2512) DN407_12675 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_12680 PF00324 Amino acid permease DN407_12685 PF01810 LysE type translocator DN407_12690 PF08892 YqcI/YcgG family DN407_12695 PF07875 Coat F domain DN407_12740 PF00067 Cytochrome P450 DN407_12755 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_12760 PF07561 Domain of Unknown Function (DUF1540) DN407_12770 PF00067 Cytochrome P450 DN407_12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_12785 PF13188 PAS domain DN407_12785 PF00989 PAS fold DN407_12785 PF13426 PAS domain DN407_12785 PF00512 His Kinase A (phospho-acceptor) domain DN407_12795 PF10502 Signal peptidase, peptidase S26 DN407_12800 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN407_12805 PF01177 Asp/Glu/Hydantoin racemase DN407_12810 PF07155 ECF-type riboflavin transporter, S component DN407_12815 PF12558 ATP-binding cassette cobalt transporter DN407_12815 PF00005 ABC transporter DN407_12830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_12830 PF00512 His Kinase A (phospho-acceptor) domain DN407_12870 PF10676 Spore germination protein gerPA/gerPF DN407_12910 PF00072 Response regulator receiver domain DN407_12910 PF00486 Transcriptional regulatory protein, C terminal DN407_12915 PF00512 His Kinase A (phospho-acceptor) domain DN407_12915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_12915 PF18719 ArlS sensor domain DN407_12920 PF00107 Zinc-binding dehydrogenase DN407_12920 PF08240 Alcohol dehydrogenase GroES-like domain DN407_12925 PF01569 PAP2 superfamily DN407_12985 PF01965 DJ-1/PfpI family DN407_13000 PF07690 Major Facilitator Superfamily DN407_13005 PF07690 Major Facilitator Superfamily DN407_13020 PF03009 Glycerophosphoryl diester phosphodiesterase family DN407_13035 PF00155 Aminotransferase class I and II DN407_13035 PF00392 Bacterial regulatory proteins, gntR family DN407_13040 PF00892 EamA-like transporter family DN407_13045 PF01270 Glycosyl hydrolases family 8 DN407_13050 PF01156 Inosine-uridine preferring nucleoside hydrolase DN407_13060 PF01784 NIF3 (NGG1p interacting factor 3) DN407_13065 PF00293 NUDIX domain DN407_13080 PF07690 Major Facilitator Superfamily DN407_13090 PF09297 NADH pyrophosphatase zinc ribbon domain DN407_13090 PF00293 NUDIX domain DN407_13095 PF00712 DNA polymerase III beta subunit, N-terminal domain DN407_13095 PF02767 DNA polymerase III beta subunit, central domain DN407_13095 PF02768 DNA polymerase III beta subunit, C-terminal domain DN407_13105 PF12706 Beta-lactamase superfamily domain DN407_13115 PF09234 Domain of unknown function (DUF1963) DN407_13140 PF01734 Patatin-like phospholipase DN407_13145 PF08000 Bacterial PH domain DN407_13155 PF12867 DinB superfamily DN407_13170 PF02673 Bacitracin resistance protein BacA DN407_13180 PF01541 GIY-YIG catalytic domain DN407_13220 PF01266 FAD dependent oxidoreductase DN407_13255 PF00072 Response regulator receiver domain DN407_13255 PF00486 Transcriptional regulatory protein, C terminal DN407_13260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_13260 PF16736 Single Cache-like DN407_13260 PF00989 PAS fold DN407_13260 PF00512 His Kinase A (phospho-acceptor) domain DN407_13275 PF00005 ABC transporter DN407_13280 PF02687 FtsX-like permease family DN407_13280 PF12704 MacB-like periplasmic core domain DN407_13290 PF07859 alpha/beta hydrolase fold DN407_13295 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN407_13300 PF13193 AMP-binding enzyme C-terminal domain DN407_13300 PF00550 Phosphopantetheine attachment site DN407_13300 PF00501 AMP-binding enzyme DN407_13300 PF00668 Condensation domain DN407_13310 PF00128 Alpha amylase, catalytic domain DN407_13310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN407_13310 PF03714 Bacterial pullanase-associated domain DN407_13315 PF07504 Fungalysin/Thermolysin Propeptide Motif DN407_13315 PF03413 Peptidase propeptide and YPEB domain DN407_13315 PF01447 Thermolysin metallopeptidase, catalytic domain DN407_13315 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN407_13320 PF02872 5'-nucleotidase, C-terminal domain DN407_13320 PF00149 Calcineurin-like phosphoesterase DN407_13335 PF00344 SecY translocase DN407_13340 PF00892 EamA-like transporter family DN407_13345 PF00392 Bacterial regulatory proteins, gntR family DN407_13345 PF00155 Aminotransferase class I and II DN407_13350 PF00561 alpha/beta hydrolase fold DN407_13375 PF06081 Aromatic acid exporter family member 1 DN407_13375 PF06081 Aromatic acid exporter family member 1 DN407_13390 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN407_13395 PF14620 YpeB sporulation DN407_13395 PF03413 Peptidase propeptide and YPEB domain DN407_13400 PF01471 Putative peptidoglycan binding domain DN407_13400 PF07486 Cell Wall Hydrolase DN407_13420 PF03301 Tryptophan 2,3-dioxygenase DN407_13425 PF04199 Putative cyclase DN407_13430 PF00266 Aminotransferase class-V DN407_13435 PF00440 Bacterial regulatory proteins, tetR family DN407_13435 PF08359 YsiA-like protein, C-terminal region DN407_13440 PF00293 NUDIX domain DN407_13440 PF13344 Haloacid dehalogenase-like hydrolase DN407_13480 PF02954 Bacterial regulatory protein, Fis family DN407_13480 PF01590 GAF domain DN407_13480 PF00158 Sigma-54 interaction domain DN407_13490 PF13302 Acetyltransferase (GNAT) domain DN407_13495 PF08220 DeoR-like helix-turn-helix domain DN407_13495 PF00455 DeoR C terminal sensor domain DN407_13510 PF02082 Transcriptional regulator DN407_13525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN407_13525 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_13530 PF00364 Biotin-requiring enzyme DN407_13530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN407_13530 PF02817 e3 binding domain DN407_13535 PF02779 Transketolase, pyrimidine binding domain DN407_13535 PF02780 Transketolase, C-terminal domain DN407_13540 PF00676 Dehydrogenase E1 component DN407_13550 PF07690 Major Facilitator Superfamily DN407_13560 PF00106 short chain dehydrogenase DN407_13565 PF13789 Domain of unknown function (DUF4181) DN407_13590 PF00528 Binding-protein-dependent transport system inner membrane component DN407_13595 PF00005 ABC transporter DN407_13595 PF00571 CBS domain DN407_13600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN407_13605 PF00574 Clp protease DN407_13620 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DN407_13625 PF13673 Acetyltransferase (GNAT) domain DN407_13630 PF18416 N-acetylglucosamine binding protein domain 2 DN407_13630 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN407_13635 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN407_13640 PF03781 Sulfatase-modifying factor enzyme 1 DN407_13655 PF10990 Protein of unknown function (DUF2809) DN407_13660 PF08241 Methyltransferase domain DN407_13665 PF04237 YjbR DN407_13710 PF00583 Acetyltransferase (GNAT) family DN407_13715 PF13538 UvrD-like helicase C-terminal domain DN407_13730 PF09382 RQC domain DN407_13730 PF00271 Helicase conserved C-terminal domain DN407_13730 PF16124 RecQ zinc-binding DN407_13730 PF00570 HRDC domain DN407_13730 PF00270 DEAD/DEAH box helicase DN407_13750 PF01510 N-acetylmuramoyl-L-alanine amidase DN407_13750 PF12123 N-acetylmuramoyl-l-alanine amidase DN407_13770 PF01368 DHH family DN407_13770 PF02833 DHHA2 domain DN407_13775 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN407_13775 PF18416 N-acetylglucosamine binding protein domain 2 DN407_13790 PF03193 RsgA GTPase DN407_13795 PF02627 Carboxymuconolactone decarboxylase family DN407_13800 PF01235 Sodium:alanine symporter family DN407_13805 PF00171 Aldehyde dehydrogenase family DN407_13810 PF00701 Dihydrodipicolinate synthetase family DN407_13815 PF05544 Proline racemase DN407_13820 PF05544 Proline racemase DN407_13825 PF01266 FAD dependent oxidoreductase DN407_13830 PF13188 PAS domain DN407_13830 PF00158 Sigma-54 interaction domain DN407_13830 PF02954 Bacterial regulatory protein, Fis family DN407_13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_13835 PF04324 BFD-like [2Fe-2S] binding domain DN407_13845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_13845 PF04324 BFD-like [2Fe-2S] binding domain DN407_13860 PF08876 Domain of unknown function (DUF1836) DN407_13865 PF09335 SNARE associated Golgi protein DN407_13875 PF04914 DltD protein DN407_13885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_13890 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DN407_13890 PF00877 NlpC/P60 family DN407_13895 PF13378 Enolase C-terminal domain-like DN407_13895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN407_13910 PF00248 Aldo/keto reductase family DN407_13915 PF01965 DJ-1/PfpI family DN407_13945 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DN407_13945 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DN407_13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_13955 PF00512 His Kinase A (phospho-acceptor) domain DN407_13955 PF00672 HAMP domain DN407_13960 PF00072 Response regulator receiver domain DN407_13960 PF00486 Transcriptional regulatory protein, C terminal DN407_13980 PF13419 Haloacid dehalogenase-like hydrolase DN407_13985 PF01048 Phosphorylase superfamily DN407_13995 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN407_14000 PF08439 Oligopeptidase F DN407_14000 PF01432 Peptidase family M3 DN407_14005 PF02645 Uncharacterised protein, DegV family COG1307 DN407_14010 PF07552 Spore Coat Protein X and V domain DN407_14045 PF07690 Major Facilitator Superfamily DN407_14055 PF04519 Polymer-forming cytoskeletal DN407_14060 PF13171 Protein of unknown function (DUF4004) DN407_14065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_14065 PF12793 Sugar transport-related sRNA regulator N-term DN407_14070 PF07690 Major Facilitator Superfamily DN407_14095 PF04226 Transglycosylase associated protein DN407_14145 PF00155 Aminotransferase class I and II DN407_14150 PF07977 FabA-like domain DN407_14155 PF03630 Fumble DN407_14175 PF00005 ABC transporter DN407_14225 PF01594 AI-2E family transporter DN407_14235 PF00296 Luciferase-like monooxygenase DN407_14240 PF00528 Binding-protein-dependent transport system inner membrane component DN407_14245 PF09084 NMT1/THI5 like DN407_14250 PF00005 ABC transporter DN407_14275 PF02522 Aminoglycoside 3-N-acetyltransferase DN407_14295 PF13536 Putative multidrug resistance efflux transporter DN407_14325 PF08713 DNA alkylation repair enzyme DN407_14330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_14340 PF01522 Polysaccharide deacetylase DN407_14345 PF03741 Integral membrane protein TerC family DN407_14350 PF00884 Sulfatase DN407_14355 PF00005 ABC transporter DN407_14355 PF12848 ABC transporter DN407_14360 PF03176 MMPL family DN407_14365 PF00440 Bacterial regulatory proteins, tetR family DN407_14365 PF16295 Tetracyclin repressor-like, C-terminal domain DN407_14375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN407_14380 PF02153 Prephenate dehydrogenase DN407_14380 PF01842 ACT domain DN407_14385 PF00155 Aminotransferase class I and II DN407_14390 PF01264 Chorismate synthase DN407_14395 PF00793 DAHP synthetase I family DN407_14395 PF01817 Chorismate mutase type II DN407_14420 PF01636 Phosphotransferase enzyme family DN407_14450 PF06725 3D domain DN407_14450 PF01476 LysM domain DN407_14460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_14465 PF01565 FAD binding domain DN407_14465 PF08031 Berberine and berberine like DN407_14490 PF06039 Malate:quinone oxidoreductase (Mqo) DN407_14495 PF13407 Periplasmic binding protein domain DN407_14500 PF02653 Branched-chain amino acid transport system / permease component DN407_14505 PF02653 Branched-chain amino acid transport system / permease component DN407_14510 PF00005 ABC transporter DN407_14515 PF00325 Bacterial regulatory proteins, crp family DN407_14515 PF04198 Putative sugar-binding domain DN407_14520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN407_14520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN407_14530 PF01791 DeoC/LacD family aldolase DN407_14540 PF03992 Antibiotic biosynthesis monooxygenase DN407_14560 PF01773 Na+ dependent nucleoside transporter N-terminus DN407_14560 PF07662 Na+ dependent nucleoside transporter C-terminus DN407_14565 PF00171 Aldehyde dehydrogenase family DN407_14570 PF00696 Amino acid kinase family DN407_14570 PF01472 PUA domain DN407_14575 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN407_14575 PF03807 NADP oxidoreductase coenzyme F420-dependent DN407_14580 PF01546 Peptidase family M20/M25/M40 DN407_14585 PF09339 IclR helix-turn-helix domain DN407_14585 PF01614 Bacterial transcriptional regulator DN407_14595 PF00324 Amino acid permease DN407_14610 PF00487 Fatty acid desaturase DN407_14615 PF05547 Immune inhibitor A peptidase M6 DN407_14620 PF04294 VanW like protein DN407_14625 PF00245 Alkaline phosphatase DN407_14630 PF11188 Protein of unknown function (DUF2975) DN407_14635 PF13443 Cro/C1-type HTH DNA-binding domain DN407_14655 PF13302 Acetyltransferase (GNAT) domain DN407_14660 PF12681 Glyoxalase-like domain DN407_14685 PF17863 AAA lid domain DN407_14685 PF07726 ATPase family associated with various cellular activities (AAA) DN407_14700 PF07690 Major Facilitator Superfamily DN407_14710 PF00535 Glycosyl transferase family 2 DN407_14725 PF00535 Glycosyl transferase family 2 DN407_14730 PF00535 Glycosyl transferase family 2 DN407_14740 PF00202 Aminotransferase class-III DN407_14745 PF06628 Catalase-related immune-responsive DN407_14745 PF00199 Catalase DN407_14750 PF08453 Peptidase family M9 N-terminal DN407_14750 PF18496 Collagenase G catalytic helper subdomain DN407_14750 PF04151 Bacterial pre-peptidase C-terminal domain DN407_14750 PF01752 Collagenase DN407_14760 PF13382 Adenine deaminase C-terminal domain DN407_14760 PF01979 Amidohydrolase family DN407_14765 PF00144 Beta-lactamase DN407_14785 PF17863 AAA lid domain DN407_14785 PF07726 ATPase family associated with various cellular activities (AAA) DN407_14795 PF14436 Bacterial EndoU nuclease DN407_14795 PF04740 LXG domain of WXG superfamily DN407_14815 PF00881 Nitroreductase family DN407_14820 PF01047 MarR family DN407_14825 PF00679 Elongation factor G C-terminus DN407_14825 PF03764 Elongation factor G, domain IV DN407_14825 PF14492 Elongation Factor G, domain II DN407_14825 PF00009 Elongation factor Tu GTP binding domain DN407_14835 PF00293 NUDIX domain DN407_14840 PF05406 WGR domain DN407_14860 PF12833 Helix-turn-helix domain DN407_14865 PF01171 PP-loop family DN407_14865 PF11734 TilS substrate C-terminal domain DN407_14865 PF14437 MafB19-like deaminase DN407_14870 PF00583 Acetyltransferase (GNAT) family DN407_14885 PF00892 EamA-like transporter family DN407_14890 PF00392 Bacterial regulatory proteins, gntR family DN407_14890 PF00155 Aminotransferase class I and II DN407_14905 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DN407_14910 PF13031 Protein of unknown function (DUF3892) DN407_14940 PF01925 Sulfite exporter TauE/SafE DN407_14950 PF00324 Amino acid permease DN407_14965 PF08713 DNA alkylation repair enzyme DN407_14985 PF00293 NUDIX domain DN407_14995 PF10502 Signal peptidase, peptidase S26 DN407_15005 PF02146 Sir2 family DN407_15010 PF01470 Pyroglutamyl peptidase DN407_15025 PF03746 LamB/YcsF family DN407_15030 PF02626 Carboxyltransferase domain, subdomain A and B DN407_15035 PF02682 Carboxyltransferase domain, subdomain C and D DN407_15040 PF01614 Bacterial transcriptional regulator DN407_15040 PF09339 IclR helix-turn-helix domain DN407_15045 PF10502 Signal peptidase, peptidase S26 DN407_15050 PF03932 CutC family DN407_15065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN407_15065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DN407_15065 PF02770 Acyl-CoA dehydrogenase, middle domain DN407_15095 PF10903 Protein of unknown function (DUF2691) DN407_15100 PF02915 Rubrerythrin DN407_15115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN407_15115 PF00391 PEP-utilising enzyme, mobile domain DN407_15135 PF01037 Lrp/AsnC ligand binding domain DN407_15145 PF00753 Metallo-beta-lactamase superfamily DN407_15150 PF10710 Protein of unknown function (DUF2512) DN407_15155 PF11553 Protein of unknown function (DUF3231) DN407_15160 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_15165 PF13823 Alcohol dehydrogenase GroES-associated DN407_15165 PF08240 Alcohol dehydrogenase GroES-like domain DN407_15165 PF00107 Zinc-binding dehydrogenase DN407_15175 PF10415 Fumarase C C-terminus DN407_15175 PF00206 Lyase DN407_15180 PF17763 Glutaminase/Asparaginase C-terminal domain DN407_15180 PF00710 Asparaginase, N-terminal DN407_15185 PF01381 Helix-turn-helix DN407_15205 PF05504 Spore germination B3/ GerAC like, C-terminal DN407_15210 PF03845 Spore germination protein DN407_15215 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_15220 PF00512 His Kinase A (phospho-acceptor) domain DN407_15220 PF13426 PAS domain DN407_15220 PF00989 PAS fold DN407_15220 PF13188 PAS domain DN407_15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_15225 PF05791 Bacillus haemolytic enterotoxin (HBL) DN407_15230 PF05791 Bacillus haemolytic enterotoxin (HBL) DN407_15245 PF17853 GGDEF-like domain DN407_15245 PF12833 Helix-turn-helix domain DN407_15265 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_15270 PF12826 Helix-hairpin-helix motif DN407_15270 PF02151 UvrB/uvrC motif DN407_15270 PF08459 UvrC Helix-hairpin-helix N-terminal DN407_15270 PF01541 GIY-YIG catalytic domain DN407_15275 PF13520 Amino acid permease DN407_15280 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN407_15280 PF03807 NADP oxidoreductase coenzyme F420-dependent DN407_15285 PF05504 Spore germination B3/ GerAC like, C-terminal DN407_15290 PF03845 Spore germination protein DN407_15295 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_15300 PF00072 Response regulator receiver domain DN407_15300 PF08664 YcbB domain DN407_15305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_15310 PF04960 Glutaminase DN407_15315 PF01235 Sodium:alanine symporter family DN407_15330 PF00144 Beta-lactamase DN407_15340 PF02872 5'-nucleotidase, C-terminal domain DN407_15340 PF17936 Bacterial Ig domain DN407_15340 PF00149 Calcineurin-like phosphoesterase DN407_15345 PF00561 alpha/beta hydrolase fold DN407_15350 PF00857 Isochorismatase family DN407_15365 PF01979 Amidohydrolase family DN407_15370 PF03466 LysR substrate binding domain DN407_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_15385 PF07690 Major Facilitator Superfamily DN407_15395 PF18496 Collagenase G catalytic helper subdomain DN407_15395 PF01752 Collagenase DN407_15395 PF08453 Peptidase family M9 N-terminal DN407_15420 PF01544 CorA-like Mg2+ transporter protein DN407_15435 PF11181 Heat induced stress protein YflT DN407_15445 PF13026 Protein of unknown function (DUF3887) DN407_15445 PF12146 Serine aminopeptidase, S33 DN407_15460 PF03073 TspO/MBR family DN407_15465 PF03441 FAD binding domain of DNA photolyase DN407_15465 PF00875 DNA photolyase DN407_15475 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DN407_15480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN407_15480 PF00361 Proton-conducting membrane transporter DN407_15485 PF10057 Uncharacterized conserved protein (DUF2294) DN407_15490 PF01522 Polysaccharide deacetylase DN407_15495 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_15495 PF08239 Bacterial SH3 domain DN407_15500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_15500 PF00512 His Kinase A (phospho-acceptor) domain DN407_15500 PF16736 Single Cache-like DN407_15500 PF00989 PAS fold DN407_15505 PF00072 Response regulator receiver domain DN407_15505 PF00486 Transcriptional regulatory protein, C terminal DN407_15515 PF01040 UbiA prenyltransferase family DN407_15520 PF01965 DJ-1/PfpI family DN407_15520 PF12833 Helix-turn-helix domain DN407_15525 PF12746 GNAT acetyltransferase DN407_15530 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN407_15535 PF01758 Sodium Bile acid symporter family DN407_15540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_15545 PF01022 Bacterial regulatory protein, arsR family DN407_15555 PF02517 CPBP intramembrane metalloprotease DN407_15560 PF01609 Transposase DDE domain DN407_15570 PF01872 RibD C-terminal domain DN407_15590 PF01609 Transposase DDE domain DN407_15600 PF00550 Phosphopantetheine attachment site DN407_15600 PF07993 Male sterility protein DN407_15605 PF00440 Bacterial regulatory proteins, tetR family DN407_15605 PF18665 Tetracyclin repressor-like, C-terminal domain DN407_15610 PF07690 Major Facilitator Superfamily DN407_15615 PF00440 Bacterial regulatory proteins, tetR family DN407_15625 PF01037 Lrp/AsnC ligand binding domain DN407_15640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_15650 PF00144 Beta-lactamase DN407_15655 PF08803 Putative mono-oxygenase ydhR DN407_15665 PF12802 MarR family DN407_15700 PF00072 Response regulator receiver domain DN407_15700 PF00196 Bacterial regulatory proteins, luxR family DN407_15730 PF00258 Flavodoxin DN407_15730 PF00067 Cytochrome P450 DN407_15730 PF00667 FAD binding domain DN407_15730 PF00175 Oxidoreductase NAD-binding domain DN407_15735 PF07690 Major Facilitator Superfamily DN407_15750 PF00291 Pyridoxal-phosphate dependent enzyme DN407_15760 PF01139 tRNA-splicing ligase RtcB DN407_15770 PF04072 Leucine carboxyl methyltransferase DN407_15785 PF00005 ABC transporter DN407_15790 PF02687 FtsX-like permease family DN407_15810 PF00512 His Kinase A (phospho-acceptor) domain DN407_15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_15810 PF00672 HAMP domain DN407_15815 PF00072 Response regulator receiver domain DN407_15815 PF00486 Transcriptional regulatory protein, C terminal DN407_15820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_15820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_15850 PF01842 ACT domain DN407_15850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN407_15850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN407_15855 PF00266 Aminotransferase class-V DN407_15895 PF01510 N-acetylmuramoyl-L-alanine amidase DN407_15895 PF01476 LysM domain DN407_15895 PF01471 Putative peptidoglycan binding domain DN407_15965 PF02557 D-alanyl-D-alanine carboxypeptidase DN407_15970 PF09587 Bacterial capsule synthesis protein PGA_cap DN407_15975 PF14044 NETI protein DN407_15980 PF07690 Major Facilitator Superfamily DN407_15990 PF12697 Alpha/beta hydrolase family DN407_15995 PF01047 MarR family DN407_16000 PF07690 Major Facilitator Superfamily DN407_16015 PF01381 Helix-turn-helix DN407_16020 PF02667 Short chain fatty acid transporter DN407_16030 PF02525 Flavodoxin-like fold DN407_16050 PF14256 YwiC-like protein DN407_16060 PF00005 ABC transporter DN407_16080 PF03737 Aldolase/RraA DN407_16085 PF03606 C4-dicarboxylate anaerobic carrier DN407_16090 PF04231 Endonuclease I DN407_16105 PF01381 Helix-turn-helix DN407_16110 PF04073 Aminoacyl-tRNA editing domain DN407_16115 PF03129 Anticodon binding domain DN407_16115 PF13393 Histidyl-tRNA synthetase DN407_16120 PF01638 HxlR-like helix-turn-helix DN407_16125 PF00881 Nitroreductase family DN407_16135 PF02887 Pyruvate kinase, alpha/beta domain DN407_16135 PF00224 Pyruvate kinase, barrel domain DN407_16135 PF00391 PEP-utilising enzyme, mobile domain DN407_16165 PF00005 ABC transporter DN407_16190 PF13419 Haloacid dehalogenase-like hydrolase DN407_16220 PF00293 NUDIX domain DN407_16220 PF13344 Haloacid dehalogenase-like hydrolase DN407_16225 PF00579 tRNA synthetases class I (W and Y) DN407_16230 PF13288 DXP reductoisomerase C-terminal domain DN407_16230 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN407_16230 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN407_16235 PF01594 AI-2E family transporter DN407_16260 PF08003 Protein of unknown function (DUF1698) DN407_16270 PF07690 Major Facilitator Superfamily DN407_16290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_16300 PF03471 Transporter associated domain DN407_16300 PF00571 CBS domain DN407_16300 PF01595 Cyclin M transmembrane N-terminal domain DN407_16305 PF13411 MerR HTH family regulatory protein DN407_16315 PF00483 Nucleotidyl transferase DN407_16320 PF16363 GDP-mannose 4,6 dehydratase DN407_16325 PF08484 C-methyltransferase C-terminal domain DN407_16325 PF08421 Putative zinc binding domain DN407_16330 PF01370 NAD dependent epimerase/dehydratase family DN407_16345 PF00892 EamA-like transporter family DN407_16355 PF00805 Pentapeptide repeats (8 copies) DN407_16360 PF06906 Protein of unknown function (DUF1272) DN407_16365 PF10282 Lactonase, 7-bladed beta-propeller DN407_16370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN407_16370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN407_16375 PF02447 GntP family permease DN407_16380 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN407_16385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN407_16385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN407_16390 PF00456 Transketolase, thiamine diphosphate binding domain DN407_16390 PF02779 Transketolase, pyrimidine binding domain DN407_16390 PF02780 Transketolase, C-terminal domain DN407_16395 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN407_16395 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN407_16400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN407_16400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN407_16410 PF08240 Alcohol dehydrogenase GroES-like domain DN407_16410 PF00107 Zinc-binding dehydrogenase DN407_16415 PF00296 Luciferase-like monooxygenase DN407_16420 PF08659 KR domain DN407_16420 PF00109 Beta-ketoacyl synthase, N-terminal domain DN407_16420 PF16197 Ketoacyl-synthetase C-terminal extension DN407_16420 PF02801 Beta-ketoacyl synthase, C-terminal domain DN407_16420 PF00107 Zinc-binding dehydrogenase DN407_16420 PF14765 Polyketide synthase dehydratase DN407_16420 PF00550 Phosphopantetheine attachment site DN407_16420 PF08240 Alcohol dehydrogenase GroES-like domain DN407_16420 PF00698 Acyl transferase domain DN407_16425 PF00106 short chain dehydrogenase DN407_16430 PF07504 Fungalysin/Thermolysin Propeptide Motif DN407_16430 PF03413 Peptidase propeptide and YPEB domain DN407_16430 PF01447 Thermolysin metallopeptidase, catalytic domain DN407_16430 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN407_16440 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DN407_16445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN407_16445 PF01872 RibD C-terminal domain DN407_16450 PF00925 GTP cyclohydrolase II DN407_16455 PF01638 HxlR-like helix-turn-helix DN407_16470 PF00248 Aldo/keto reductase family DN407_16475 PF07690 Major Facilitator Superfamily DN407_16485 PF03928 Haem-degrading DN407_16495 PF01047 MarR family DN407_16535 PF03960 ArsC family DN407_16545 PF07702 UTRA domain DN407_16545 PF00392 Bacterial regulatory proteins, gntR family DN407_16550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN407_16550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN407_16560 PF01638 HxlR-like helix-turn-helix DN407_16565 PF01638 HxlR-like helix-turn-helix DN407_16570 PF00248 Aldo/keto reductase family DN407_16610 PF02567 Phenazine biosynthesis-like protein DN407_16615 PF13302 Acetyltransferase (GNAT) domain DN407_16620 PF13193 AMP-binding enzyme C-terminal domain DN407_16620 PF00501 AMP-binding enzyme DN407_16625 PF02525 Flavodoxin-like fold DN407_16630 PF01638 HxlR-like helix-turn-helix DN407_16640 PF01022 Bacterial regulatory protein, arsR family DN407_16645 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DN407_16645 PF01522 Polysaccharide deacetylase DN407_16650 PF12791 Anti-sigma factor N-terminus DN407_16655 PF04542 Sigma-70 region 2 DN407_16660 PF00535 Glycosyl transferase family 2 DN407_16660 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DN407_16695 PF01061 ABC-2 type transporter DN407_16700 PF00005 ABC transporter DN407_16700 PF13732 Domain of unknown function (DUF4162) DN407_16725 PF03063 Prismane/CO dehydrogenase family DN407_16730 PF00753 Metallo-beta-lactamase superfamily DN407_16780 PF00753 Metallo-beta-lactamase superfamily DN407_16785 PF00324 Amino acid permease DN407_16790 PF07690 Major Facilitator Superfamily DN407_16820 PF02585 GlcNAc-PI de-N-acetylase DN407_16825 PF08830 Protein of unknown function (DUF1806) DN407_16830 PF03600 Citrate transporter DN407_16840 PF00583 Acetyltransferase (GNAT) family DN407_16845 PF01497 Periplasmic binding protein DN407_16850 PF01032 FecCD transport family DN407_16855 PF01032 FecCD transport family DN407_16865 PF13170 Protein of unknown function (DUF4003) DN407_16880 PF13302 Acetyltransferase (GNAT) domain DN407_16885 PF10901 Protein of unknown function (DUF2690) DN407_16895 PF03466 LysR substrate binding domain DN407_16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_16900 PF08240 Alcohol dehydrogenase GroES-like domain DN407_16900 PF00107 Zinc-binding dehydrogenase DN407_16905 PF17827 PrmC N-terminal domain DN407_16905 PF05175 Methyltransferase small domain DN407_16920 PF00488 MutS domain V DN407_16920 PF01713 Smr domain DN407_16925 PF09154 Domain of unknown function (DUF1939) DN407_16925 PF00128 Alpha amylase, catalytic domain DN407_16930 PF00797 N-acetyltransferase DN407_16935 PF08439 Oligopeptidase F DN407_16935 PF01432 Peptidase family M3 DN407_16940 PF00144 Beta-lactamase DN407_16955 PF03466 LysR substrate binding domain DN407_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_16965 PF03009 Glycerophosphoryl diester phosphodiesterase family DN407_16970 PF01494 FAD binding domain DN407_16975 PF01022 Bacterial regulatory protein, arsR family DN407_16980 PF08240 Alcohol dehydrogenase GroES-like domain DN407_16980 PF00107 Zinc-binding dehydrogenase DN407_16985 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DN407_16990 PF18801 response regulator aspartate phosphatase H, N terminal DN407_17005 PF01565 FAD binding domain DN407_17005 PF02913 FAD linked oxidases, C-terminal domain DN407_17030 PF01066 CDP-alcohol phosphatidyltransferase DN407_17040 PF00753 Metallo-beta-lactamase superfamily DN407_17040 PF00581 Rhodanese-like domain DN407_17045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_17055 PF00483 Nucleotidyl transferase DN407_17065 PF01370 NAD dependent epimerase/dehydratase family DN407_17070 PF16363 GDP-mannose 4,6 dehydratase DN407_17080 PF18801 response regulator aspartate phosphatase H, N terminal DN407_17085 PF00672 HAMP domain DN407_17085 PF02743 Cache domain DN407_17085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_17125 PF03707 Bacterial signalling protein N terminal repeat DN407_17125 PF00563 EAL domain DN407_17125 PF00990 Diguanylate cyclase, GGDEF domain DN407_17160 PF00989 PAS fold DN407_17160 PF00512 His Kinase A (phospho-acceptor) domain DN407_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_17165 PF18496 Collagenase G catalytic helper subdomain DN407_17165 PF01752 Collagenase DN407_17165 PF08453 Peptidase family M9 N-terminal DN407_17170 PF02308 MgtC family DN407_17180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_17185 PF04294 VanW like protein DN407_17195 PF13039 Protein of unknown function (DUF3900) DN407_17195 PF13037 Domain of unknown function (DUF3898) DN407_17210 PF00313 'Cold-shock' DNA-binding domain DN407_17220 PF00258 Flavodoxin DN407_17235 PF00293 NUDIX domain DN407_17245 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_17255 PF00106 short chain dehydrogenase DN407_17265 PF00206 Lyase DN407_17265 PF14698 Argininosuccinate lyase C-terminal DN407_17275 PF01156 Inosine-uridine preferring nucleoside hydrolase DN407_17280 PF00474 Sodium:solute symporter family DN407_17285 PF06196 Protein of unknown function (DUF997) DN407_17290 PF00171 Aldehyde dehydrogenase family DN407_17305 PF13243 Squalene-hopene cyclase C-terminal domain DN407_17305 PF13249 Squalene-hopene cyclase N-terminal domain DN407_17310 PF02681 Divergent PAP2 family DN407_17315 PF00892 EamA-like transporter family DN407_17320 PF06961 Protein of unknown function (DUF1294) DN407_17335 PF10609 NUBPL iron-transfer P-loop NTPase DN407_17345 PF02391 MoaE protein DN407_17350 PF03454 MoeA C-terminal region (domain IV) DN407_17350 PF00994 Probable molybdopterin binding domain DN407_17350 PF03453 MoeA N-terminal region (domain I and II) DN407_17355 PF00899 ThiF family DN407_17360 PF01226 Formate/nitrite transporter DN407_17365 PF04055 Radical SAM superfamily DN407_17365 PF06463 Molybdenum Cofactor Synthesis C DN407_17370 PF02634 FdhD/NarQ family DN407_17375 PF10057 Uncharacterized conserved protein (DUF2294) DN407_17380 PF07849 Protein of unknown function (DUF1641) DN407_17385 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN407_17385 PF01568 Molydopterin dinucleotide binding domain DN407_17385 PF00384 Molybdopterin oxidoreductase DN407_17385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN407_17385 PF00037 4Fe-4S binding domain DN407_17390 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_17405 PF13520 Amino acid permease DN407_17440 PF08241 Methyltransferase domain DN407_17445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_17450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_17455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN407_17460 PF03816 Cell envelope-related transcriptional attenuator domain DN407_17470 PF08281 Sigma-70, region 4 DN407_17470 PF04542 Sigma-70 region 2 DN407_17480 PF13732 Domain of unknown function (DUF4162) DN407_17480 PF00005 ABC transporter DN407_17500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN407_17500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN407_17505 PF00521 DNA gyrase/topoisomerase IV, subunit A DN407_17505 PF03989 DNA gyrase C-terminal domain, beta-propeller DN407_17510 PF00986 DNA gyrase B subunit, carboxyl terminus DN407_17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_17510 PF00204 DNA gyrase B DN407_17510 PF01751 Toprim domain DN407_17515 PF13380 CoA binding domain DN407_17520 PF13180 PDZ domain DN407_17525 PF00072 Response regulator receiver domain DN407_17525 PF00486 Transcriptional regulatory protein, C terminal DN407_17530 PF04055 Radical SAM superfamily DN407_17535 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN407_17535 PF03477 ATP cone domain DN407_17540 PF02660 Glycerol-3-phosphate acyltransferase DN407_17545 PF01521 Iron-sulphur cluster biosynthesis DN407_17550 PF03061 Thioesterase superfamily DN407_17555 PF00704 Glycosyl hydrolases family 18 DN407_17555 PF01476 LysM domain DN407_17565 PF08177 Small acid-soluble spore protein N family DN407_17570 PF13040 Fur-regulated basic protein B DN407_17575 PF02811 PHP domain DN407_17575 PF14579 Helix-hairpin-helix motif DN407_17575 PF00929 Exonuclease DN407_17575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN407_17575 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN407_17575 PF11490 DNA polymerase III polC-type N-terminus II DN407_17575 PF01336 OB-fold nucleic acid binding domain DN407_17580 PF00578 AhpC/TSA family DN407_17595 PF00664 ABC transporter transmembrane region DN407_17595 PF00005 ABC transporter DN407_17600 PF00330 Aconitase family (aconitate hydratase) DN407_17600 PF00694 Aconitase C-terminal domain DN407_17610 PF01522 Polysaccharide deacetylase DN407_17620 PF08179 Small acid-soluble spore protein P family DN407_17630 PF07690 Major Facilitator Superfamily DN407_17640 PF01411 tRNA synthetases class II (A) DN407_17640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN407_17640 PF02272 DHHA1 domain DN407_17645 PF00293 NUDIX domain DN407_17645 PF13344 Haloacid dehalogenase-like hydrolase DN407_17655 PF00108 Thiolase, N-terminal domain DN407_17655 PF02803 Thiolase, C-terminal domain DN407_17660 PF13193 AMP-binding enzyme C-terminal domain DN407_17660 PF00501 AMP-binding enzyme DN407_17665 PF02632 BioY family DN407_17670 PF13193 AMP-binding enzyme C-terminal domain DN407_17670 PF00501 AMP-binding enzyme DN407_17675 PF01381 Helix-turn-helix DN407_17695 PF05532 CsbD-like DN407_17700 PF03824 High-affinity nickel-transport protein DN407_17705 PF02293 AmiS/UreI family transporter DN407_17710 PF01774 UreD urease accessory protein DN407_17715 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN407_17720 PF01730 UreF DN407_17725 PF02814 UreE urease accessory protein, N-terminal domain DN407_17725 PF05194 UreE urease accessory protein, C-terminal domain DN407_17730 PF00449 Urease alpha-subunit, N-terminal domain DN407_17730 PF01979 Amidohydrolase family DN407_17735 PF00699 Urease beta subunit DN407_17740 PF00547 Urease, gamma subunit DN407_17760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_17760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_17775 PF13426 PAS domain DN407_17775 PF13188 PAS domain DN407_17775 PF00989 PAS fold DN407_17775 PF00512 His Kinase A (phospho-acceptor) domain DN407_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_17780 PF01738 Dienelactone hydrolase family DN407_17785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_17795 PF01645 Conserved region in glutamate synthase DN407_17800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN407_17805 PF02559 CarD-like/TRCF domain DN407_17810 PF00491 Arginase family DN407_17815 PF01979 Amidohydrolase family DN407_17820 PF17392 Urocanase C-terminal domain DN407_17820 PF01175 Urocanase Rossmann-like domain DN407_17820 PF17391 Urocanase N-terminal domain DN407_17825 PF00221 Aromatic amino acid lyase DN407_17830 PF09021 HutP DN407_17835 PF01209 ubiE/COQ5 methyltransferase family DN407_17860 PF11084 Protein of unknown function (DUF2621) DN407_17865 PF07301 Protein of unknown function (DUF1453) DN407_17870 PF02683 Cytochrome C biogenesis protein transmembrane region DN407_17895 PF00005 ABC transporter DN407_17910 PF03466 LysR substrate binding domain DN407_17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_17915 PF03788 LrgA family DN407_17920 PF04172 LrgB-like family DN407_17925 PF13344 Haloacid dehalogenase-like hydrolase DN407_17925 PF00293 NUDIX domain DN407_17935 PF01925 Sulfite exporter TauE/SafE DN407_17960 PF00005 ABC transporter DN407_17960 PF00664 ABC transporter transmembrane region DN407_17965 PF00664 ABC transporter transmembrane region DN407_17965 PF00005 ABC transporter DN407_17970 PF03672 Uncharacterised protein family (UPF0154) DN407_17975 PF10747 Sporulation inhibitor of replication protein SirA DN407_17980 PF02780 Transketolase, C-terminal domain DN407_17980 PF00456 Transketolase, thiamine diphosphate binding domain DN407_17980 PF02779 Transketolase, pyrimidine binding domain DN407_17990 PF00528 Binding-protein-dependent transport system inner membrane component DN407_17995 PF00528 Binding-protein-dependent transport system inner membrane component DN407_18000 PF00005 ABC transporter DN407_18005 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN407_18010 PF02872 5'-nucleotidase, C-terminal domain DN407_18010 PF00149 Calcineurin-like phosphoesterase DN407_18015 PF05979 Bacterial protein of unknown function (DUF896) DN407_18020 PF00239 Resolvase, N terminal domain DN407_18025 PF01726 LexA DNA binding domain DN407_18025 PF00717 Peptidase S24-like DN407_18040 PF03551 Transcriptional regulator PadR-like family DN407_18045 PF03951 Glutamine synthetase, beta-Grasp domain DN407_18045 PF00120 Glutamine synthetase, catalytic domain DN407_18050 PF13411 MerR HTH family regulatory protein DN407_18055 PF06838 Methionine gamma-lyase DN407_18060 PF16360 GTP-binding GTPase Middle Region DN407_18060 PF13167 GTP-binding GTPase N-terminal DN407_18060 PF01926 50S ribosome-binding GTPase DN407_18065 PF03458 UPF0126 domain DN407_18070 PF00004 ATPase family associated with various cellular activities (AAA) DN407_18070 PF17866 AAA lid domain DN407_18085 PF17209 Hfq protein DN407_18100 PF01476 LysM domain DN407_18100 PF06725 3D domain DN407_18105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN407_18105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN407_18110 PF00294 pfkB family carbohydrate kinase DN407_18115 PF08220 DeoR-like helix-turn-helix domain DN407_18115 PF00455 DeoR C terminal sensor domain DN407_18120 PF00465 Iron-containing alcohol dehydrogenase DN407_18125 PF04238 Protein of unknown function (DUF420) DN407_18135 PF00324 Amino acid permease DN407_18145 PF00704 Glycosyl hydrolases family 18 DN407_18145 PF00041 Fibronectin type III domain DN407_18150 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN407_18150 PF00149 Calcineurin-like phosphoesterase DN407_18155 PF01226 Formate/nitrite transporter DN407_18160 PF00216 Bacterial DNA-binding protein DN407_18170 PF00403 Heavy-metal-associated domain DN407_18175 PF00403 Heavy-metal-associated domain DN407_18180 PF02583 Metal-sensitive transcriptional repressor DN407_18190 PF00756 Putative esterase DN407_18195 PF00005 ABC transporter DN407_18200 PF01032 FecCD transport family DN407_18205 PF01032 FecCD transport family DN407_18210 PF01497 Periplasmic binding protein DN407_18220 PF02805 Metal binding domain of Ada DN407_18220 PF12833 Helix-turn-helix domain DN407_18225 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN407_18225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN407_18230 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DN407_18230 PF00730 HhH-GPD superfamily base excision DNA repair protein DN407_18235 PF07687 Peptidase dimerisation domain DN407_18235 PF01546 Peptidase family M20/M25/M40 DN407_18255 PF00990 Diguanylate cyclase, GGDEF domain DN407_18255 PF03707 Bacterial signalling protein N terminal repeat DN407_18255 PF00563 EAL domain DN407_18260 PF03033 Glycosyltransferase family 28 N-terminal domain DN407_18260 PF04101 Glycosyltransferase family 28 C-terminal domain DN407_18270 PF16363 GDP-mannose 4,6 dehydratase DN407_18275 PF08485 Polysaccharide biosynthesis protein C-terminal DN407_18275 PF02719 Polysaccharide biosynthesis protein DN407_18290 PF10787 Uncharacterised protein from bacillus cereus group DN407_18295 PF04172 LrgB-like family DN407_18300 PF03788 LrgA family DN407_18305 PF00392 Bacterial regulatory proteins, gntR family DN407_18305 PF00155 Aminotransferase class I and II DN407_18315 PF00392 Bacterial regulatory proteins, gntR family DN407_18315 PF07702 UTRA domain DN407_18320 PF00232 Glycosyl hydrolase family 1 DN407_18325 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN407_18330 PF00082 Subtilase family DN407_18335 PF07486 Cell Wall Hydrolase DN407_18350 PF00884 Sulfatase DN407_18355 PF00350 Dynamin family DN407_18365 PF01119 DNA mismatch repair protein, C-terminal domain DN407_18365 PF08676 MutL C terminal dimerisation domain DN407_18370 PF00488 MutS domain V DN407_18370 PF05190 MutS family domain IV DN407_18370 PF01624 MutS domain I DN407_18370 PF05188 MutS domain II DN407_18370 PF05192 MutS domain III DN407_18375 PF10628 Outer spore coat protein E (CotE) DN407_18380 PF06133 Control of competence regulator ComK, YlbF/YmcA DN407_18385 PF00919 Uncharacterized protein family UPF0004 DN407_18385 PF01938 TRAM domain DN407_18385 PF04055 Radical SAM superfamily DN407_18390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_18395 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN407_18395 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN407_18395 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN407_18400 PF01244 Membrane dipeptidase (Peptidase family M19) DN407_18405 PF04232 Stage V sporulation protein S (SpoVS) DN407_18410 PF13277 YmdB-like protein DN407_18415 PF12072 Domain of unknown function (DUF3552) DN407_18415 PF00013 KH domain DN407_18415 PF01966 HD domain DN407_18420 PF00154 recA bacterial DNA recombination protein DN407_18425 PF02464 Competence-damaged protein DN407_18425 PF18146 Damage-inducible protein CinA KH domain DN407_18425 PF00994 Probable molybdopterin binding domain DN407_18430 PF01066 CDP-alcohol phosphatidyltransferase DN407_18435 PF13464 Domain of unknown function (DUF4115) DN407_18440 PF11868 Protein of unknown function (DUF3388) DN407_18445 PF11588 Protein of unknown function (DUF3243) DN407_18455 PF00675 Insulinase (Peptidase family M16) DN407_18455 PF05193 Peptidase M16 inactive domain DN407_18460 PF05193 Peptidase M16 inactive domain DN407_18485 PF07702 UTRA domain DN407_18485 PF00392 Bacterial regulatory proteins, gntR family DN407_18495 PF01580 FtsK/SpoIIIE family DN407_18495 PF17854 FtsK alpha domain DN407_18495 PF09397 Ftsk gamma domain DN407_18500 PF14035 YlzJ-like protein DN407_18505 PF00574 Clp protease DN407_18510 PF17770 Ribonuclease J C-terminal domain DN407_18510 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN407_18510 PF00753 Metallo-beta-lactamase superfamily DN407_18515 PF00701 Dihydrodipicolinate synthetase family DN407_18520 PF00696 Amino acid kinase family DN407_18520 PF13840 ACT domain DN407_18525 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN407_18525 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN407_18530 PF02441 Flavoprotein DN407_18535 PF04740 LXG domain of WXG superfamily DN407_18535 PF14436 Bacterial EndoU nuclease DN407_18665 PF00313 'Cold-shock' DNA-binding domain DN407_18670 PF04259 Small, acid-soluble spore protein, gamma-type DN407_18675 PF00589 Phage integrase family DN407_18710 PF00772 DnaB-like helicase N terminal domain DN407_18710 PF03796 DnaB-like helicase C terminal domain DN407_18790 PF16924 Dipicolinate synthase subunit A N-terminal domain DN407_18790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN407_18795 PF05239 PRC-barrel domain DN407_18800 PF05193 Peptidase M16 inactive domain DN407_18800 PF00675 Insulinase (Peptidase family M16) DN407_18805 PF01522 Polysaccharide deacetylase DN407_18810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DN407_18810 PF00013 KH domain DN407_18810 PF00575 S1 RNA binding domain DN407_18810 PF01138 3' exoribonuclease family, domain 1 DN407_18810 PF03725 3' exoribonuclease family, domain 2 DN407_18815 PF00312 Ribosomal protein S15 DN407_18820 PF06574 FAD synthetase DN407_18820 PF01687 Riboflavin kinase DN407_18825 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN407_18825 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN407_18830 PF02033 Ribosome-binding factor A DN407_18835 PF04456 Protein of unknown function (DUF503) DN407_18840 PF00009 Elongation factor Tu GTP binding domain DN407_18840 PF11987 Translation-initiation factor 2 DN407_18840 PF04760 Translation initiation factor IF-2, N-terminal region DN407_18845 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN407_18850 PF04296 Protein of unknown function (DUF448) DN407_18855 PF00575 S1 RNA binding domain DN407_18855 PF13184 NusA-like KH domain DN407_18855 PF08529 NusA N-terminal domain DN407_18860 PF02576 RimP N-terminal domain DN407_18860 PF17384 RimP C-terminal SH3 domain DN407_18865 PF11490 DNA polymerase III polC-type N-terminus II DN407_18865 PF14480 DNA polymerase III polC-type N-terminus I DN407_18865 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN407_18865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN407_18865 PF00929 Exonuclease DN407_18865 PF14579 Helix-hairpin-helix motif DN407_18865 PF02811 PHP domain DN407_18870 PF04073 Aminoacyl-tRNA editing domain DN407_18870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN407_18870 PF03129 Anticodon binding domain DN407_18875 PF17820 PDZ domain DN407_18875 PF02163 Peptidase family M50 DN407_18880 PF13288 DXP reductoisomerase C-terminal domain DN407_18880 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN407_18880 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN407_18890 PF01255 Putative undecaprenyl diphosphate synthase DN407_18895 PF01765 Ribosome recycling factor DN407_18900 PF00696 Amino acid kinase family DN407_18905 PF00889 Elongation factor TS DN407_18910 PF00318 Ribosomal protein S2 DN407_18915 PF08222 CodY helix-turn-helix domain DN407_18915 PF06018 CodY GAF-like domain DN407_18920 PF07724 AAA domain (Cdc48 subfamily) DN407_18920 PF00004 ATPase family associated with various cellular activities (AAA) DN407_18920 PF10431 C-terminal, D2-small domain, of ClpB protein DN407_18925 PF00227 Proteasome subunit DN407_18930 PF02899 Phage integrase, N-terminal SAM-like domain DN407_18930 PF00589 Phage integrase family DN407_18935 PF01134 Glucose inhibited division protein A DN407_18940 PF01396 Topoisomerase DNA binding C4 zinc finger DN407_18940 PF01131 DNA topoisomerase DN407_18940 PF01751 Toprim domain DN407_18945 PF02481 DNA recombination-mediator protein A DN407_18950 PF00549 CoA-ligase DN407_18950 PF02629 CoA binding domain DN407_18955 PF08442 ATP-grasp domain DN407_18955 PF00549 CoA-ligase DN407_18960 PF01351 Ribonuclease HII DN407_18965 PF01926 50S ribosome-binding GTPase DN407_18970 PF10502 Signal peptidase, peptidase S26 DN407_18975 PF01245 Ribosomal protein L19 DN407_18980 PF01746 tRNA (Guanine-1)-methyltransferase DN407_18985 PF05239 PRC-barrel domain DN407_18985 PF01782 RimM N-terminal domain DN407_18995 PF00886 Ribosomal protein S16 DN407_19000 PF02978 Signal peptide binding domain DN407_19000 PF00448 SRP54-type protein, GTPase domain DN407_19000 PF02881 SRP54-type protein, helical bundle domain DN407_19005 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DN407_19010 PF02881 SRP54-type protein, helical bundle domain DN407_19010 PF00448 SRP54-type protein, GTPase domain DN407_19015 PF02463 RecF/RecN/SMC N terminal domain DN407_19015 PF06470 SMC proteins Flexible Hinge Domain DN407_19020 PF14622 Ribonuclease-III-like DN407_19020 PF00035 Double-stranded RNA binding motif DN407_19025 PF00550 Phosphopantetheine attachment site DN407_19035 PF00698 Acyl transferase domain DN407_19040 PF02504 Fatty acid synthesis protein DN407_19045 PF03061 Thioesterase superfamily DN407_19050 PF17191 RecG wedge domain DN407_19050 PF00270 DEAD/DEAH box helicase DN407_19050 PF00271 Helicase conserved C-terminal domain DN407_19055 PF13684 Dihydroxyacetone kinase family DN407_19055 PF02734 DAK2 domain DN407_19060 PF03780 Asp23 family, cell envelope-related function DN407_19065 PF00830 Ribosomal L28 family DN407_19070 PF08183 Stage V sporulation protein family DN407_19075 PF04263 Thiamin pyrophosphokinase, catalytic domain DN407_19075 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DN407_19080 PF00834 Ribulose-phosphate 3 epimerase family DN407_19085 PF03193 RsgA GTPase DN407_19085 PF16745 RsgA N-terminal domain DN407_19090 PF03793 PASTA domain DN407_19090 PF00069 Protein kinase domain DN407_19100 PF04055 Radical SAM superfamily DN407_19105 PF01029 NusB family DN407_19105 PF01189 16S rRNA methyltransferase RsmB/F DN407_19110 PF02911 Formyl transferase, C-terminal domain DN407_19110 PF00551 Formyl transferase DN407_19115 PF01327 Polypeptide deformylase DN407_19120 PF18074 Primosomal protein N C-terminal domain DN407_19120 PF17764 3′ DNA-binding domain (3′BD) DN407_19120 PF00271 Helicase conserved C-terminal domain DN407_19120 PF04851 Type III restriction enzyme, res subunit DN407_19120 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN407_19125 PF02441 Flavoprotein DN407_19125 PF04127 DNA / pantothenate metabolism flavoprotein DN407_19130 PF01192 RNA polymerase Rpb6 DN407_19135 PF00625 Guanylate kinase DN407_19140 PF04025 Domain of unknown function (DUF370) DN407_19145 PF03755 YicC-like family, N-terminal region DN407_19145 PF08340 Domain of unknown function (DUF1732) DN407_19150 PF00689 Cation transporting ATPase, C-terminus DN407_19150 PF00690 Cation transporter/ATPase, N-terminus DN407_19165 PF01321 Creatinase/Prolidase N-terminal domain DN407_19165 PF00557 Metallopeptidase family M24 DN407_19190 PF13419 Haloacid dehalogenase-like hydrolase DN407_19195 PF00156 Phosphoribosyl transferase domain DN407_19200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN407_19205 PF01180 Dihydroorotate dehydrogenase DN407_19210 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN407_19215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN407_19215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN407_19215 PF02142 MGS-like domain DN407_19220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN407_19220 PF00117 Glutamine amidotransferase class-I DN407_19225 PF01979 Amidohydrolase family DN407_19230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN407_19230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN407_19235 PF00860 Permease family DN407_19240 PF00156 Phosphoribosyl transferase domain DN407_19245 PF00849 RNA pseudouridylate synthase DN407_19245 PF01479 S4 domain DN407_19250 PF01252 Signal peptidase (SPase) II DN407_19260 PF00133 tRNA synthetases class I (I, L, M and V) DN407_19260 PF06827 Zinc finger found in FPG and IleRS DN407_19260 PF08264 Anticodon-binding domain of tRNA DN407_19265 PF05103 DivIVA protein DN407_19270 PF01479 S4 domain DN407_19270 PF17774 Putative RNA-binding domain in YlmH DN407_19275 PF02325 YGGT family DN407_19280 PF04472 Cell division protein SepF DN407_19285 PF01168 Alanine racemase, N-terminal domain DN407_19295 PF05239 PRC-barrel domain DN407_19300 PF04542 Sigma-70 region 2 DN407_19300 PF04539 Sigma-70 region 3 DN407_19300 PF04545 Sigma-70, region 4 DN407_19305 PF04542 Sigma-70 region 2 DN407_19305 PF04545 Sigma-70, region 4 DN407_19310 PF03419 Sporulation factor SpoIIGA DN407_19315 PF12327 FtsZ family, C-terminal domain DN407_19315 PF00091 Tubulin/FtsZ family, GTPase domain DN407_19320 PF02491 SHS2 domain inserted in FTSA DN407_19325 PF03799 Cell division protein FtsQ DN407_19325 PF08478 POTRA domain, FtsQ-type DN407_19330 PF01565 FAD binding domain DN407_19330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN407_19335 PF04101 Glycosyltransferase family 28 C-terminal domain DN407_19335 PF03033 Glycosyltransferase family 28 N-terminal domain DN407_19340 PF01098 Cell cycle protein DN407_19345 PF08245 Mur ligase middle domain DN407_19345 PF02875 Mur ligase family, glutamate ligase domain DN407_19350 PF00953 Glycosyl transferase family 4 DN407_19350 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DN407_19355 PF02875 Mur ligase family, glutamate ligase domain DN407_19355 PF01225 Mur ligase family, catalytic domain DN407_19355 PF08245 Mur ligase middle domain DN407_19360 PF03717 Penicillin-binding Protein dimerisation domain DN407_19360 PF03793 PASTA domain DN407_19360 PF00905 Penicillin binding protein transpeptidase domain DN407_19370 PF04977 Septum formation initiator DN407_19375 PF01795 MraW methylase family DN407_19380 PF10079 Bacillithiol biosynthesis BshC DN407_19385 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN407_19385 PF02558 Ketopantoate reductase PanE/ApbA DN407_19390 PF00583 Acetyltransferase (GNAT) family DN407_19400 PF01783 Ribosomal L32p protein family DN407_19405 PF02620 Large ribosomal RNA subunit accumulation protein YceD DN407_19410 PF05636 HIGH Nucleotidyl Transferase DN407_19415 PF13180 PDZ domain DN407_19415 PF05362 Lon protease (S16) C-terminal proteolytic domain DN407_19420 PF01734 Patatin-like phospholipase DN407_19425 PF07670 Nucleoside recognition DN407_19430 PF01467 Cytidylyltransferase-like DN407_19445 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DN407_19450 PF06133 Control of competence regulator ComK, YlbF/YmcA DN407_19455 PF00300 Histidine phosphatase superfamily (branch 1) DN407_19460 PF14003 YlbE-like protein DN407_19465 PF14071 Putative coat protein DN407_19470 PF14504 CAP-associated N-terminal DN407_19470 PF00188 Cysteine-rich secretory protein family DN407_19475 PF08868 YugN-like family DN407_19480 PF00795 Carbon-nitrogen hydrolase DN407_19485 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DN407_19490 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DN407_19495 PF00510 Cytochrome c oxidase subunit III DN407_19500 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN407_19505 PF00034 Cytochrome c DN407_19505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DN407_19505 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN407_19510 PF01040 UbiA prenyltransferase family DN407_19515 PF02628 Cytochrome oxidase assembly protein DN407_19520 PF00682 HMGL-like DN407_19520 PF02785 Biotin carboxylase C-terminal domain DN407_19520 PF00289 Biotin carboxylase, N-terminal domain DN407_19520 PF00364 Biotin-requiring enzyme DN407_19520 PF02436 Conserved carboxylase domain DN407_19520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN407_19530 PF01098 Cell cycle protein DN407_19535 PF07408 Protein of unknown function (DUF1507) DN407_19545 PF13638 PIN domain DN407_19545 PF02562 PhoH-like protein DN407_19555 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DN407_19565 PF14036 YlaH-like protein DN407_19580 PF00459 Inositol monophosphatase family DN407_19590 PF06335 Protein of unknown function (DUF1054) DN407_19595 PF05256 Uncharacterised protein family (UPF0223) DN407_19600 PF01276 Orn/Lys/Arg decarboxylase, major domain DN407_19600 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN407_19640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN407_19640 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_19645 PF00364 Biotin-requiring enzyme DN407_19645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN407_19645 PF02817 e3 binding domain DN407_19650 PF02780 Transketolase, C-terminal domain DN407_19650 PF02779 Transketolase, pyrimidine binding domain DN407_19655 PF00676 Dehydrogenase E1 component DN407_19665 PF01327 Polypeptide deformylase DN407_19685 PF00753 Metallo-beta-lactamase superfamily DN407_19685 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN407_19685 PF17770 Ribonuclease J C-terminal domain DN407_19690 PF02080 TrkA-C domain DN407_19690 PF02254 TrkA-N domain DN407_19700 PF07687 Peptidase dimerisation domain DN407_19700 PF01546 Peptidase family M20/M25/M40 DN407_19705 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DN407_19705 PF14602 Hexapeptide repeat of succinyl-transferase DN407_19705 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_19710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_19710 PF03466 LysR substrate binding domain DN407_19725 PF04308 Ribonuclease H-like DN407_19730 PF08796 Protein of unknown function (DUF1797) DN407_19745 PF10388 EAL-domain associated signalling protein domain DN407_19745 PF00563 EAL domain DN407_19755 PF00149 Calcineurin-like phosphoesterase DN407_19755 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN407_19765 PF17941 Polyphosphate kinase C-terminal domain 1 DN407_19765 PF13089 Polyphosphate kinase N-terminal domain DN407_19765 PF13090 Polyphosphate kinase C-terminal domain 2 DN407_19765 PF02503 Polyphosphate kinase middle domain DN407_19770 PF02541 Ppx/GppA phosphatase family DN407_19775 PF14177 YkyB-like protein DN407_19800 PF07690 Major Facilitator Superfamily DN407_19815 PF08267 Cobalamin-independent synthase, N-terminal domain DN407_19815 PF01717 Cobalamin-independent synthase, Catalytic domain DN407_19825 PF14040 Deoxyribonuclease NucA/NucB DN407_19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_19835 PF00512 His Kinase A (phospho-acceptor) domain DN407_19845 PF00155 Aminotransferase class I and II DN407_19850 PF00356 Bacterial regulatory proteins, lacI family DN407_19850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN407_19855 PF00528 Binding-protein-dependent transport system inner membrane component DN407_19860 PF00528 Binding-protein-dependent transport system inner membrane component DN407_19865 PF13416 Bacterial extracellular solute-binding protein DN407_19870 PF02903 Alpha amylase, N-terminal ig-like domain DN407_19870 PF16657 Maltogenic Amylase, C-terminal domain DN407_19870 PF00128 Alpha amylase, catalytic domain DN407_19875 PF16657 Maltogenic Amylase, C-terminal domain DN407_19875 PF00128 Alpha amylase, catalytic domain DN407_19880 PF00005 ABC transporter DN407_19880 PF17912 MalK OB fold domain DN407_19880 PF03459 TOBE domain DN407_19920 PF00108 Thiolase, N-terminal domain DN407_19920 PF02803 Thiolase, C-terminal domain DN407_19925 PF00293 NUDIX domain DN407_19955 PF03551 Transcriptional regulator PadR-like family DN407_19975 PF01636 Phosphotransferase enzyme family DN407_19980 PF00795 Carbon-nitrogen hydrolase DN407_19985 PF00155 Aminotransferase class I and II DN407_19990 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DN407_19990 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DN407_20000 PF00596 Class II Aldolase and Adducin N-terminal domain DN407_20005 PF03079 ARD/ARD' family DN407_20020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN407_20020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN407_20025 PF00144 Beta-lactamase DN407_20030 PF00990 Diguanylate cyclase, GGDEF domain DN407_20035 PF00881 Nitroreductase family DN407_20050 PF02896 PEP-utilising enzyme, TIM barrel domain DN407_20050 PF05524 PEP-utilising enzyme, N-terminal DN407_20050 PF00391 PEP-utilising enzyme, mobile domain DN407_20055 PF00381 PTS HPr component phosphorylation site DN407_20060 PF00367 phosphotransferase system, EIIB DN407_20060 PF02378 Phosphotransferase system, EIIC DN407_20060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN407_20065 PF03123 CAT RNA binding domain DN407_20065 PF00874 PRD domain DN407_20080 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DN407_20085 PF01979 Amidohydrolase family DN407_20095 PF04079 Segregation and condensation complex subunit ScpB DN407_20105 PF02616 Segregation and condensation protein ScpA DN407_20115 PF03745 Domain of unknown function (DUF309) DN407_20120 PF00583 Acetyltransferase (GNAT) family DN407_20125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN407_20130 PF06207 Protein of unknown function (DUF1002) DN407_20140 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_20145 PF14097 Stage V sporulation protein AE1 DN407_20150 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN407_20155 PF07451 Stage V sporulation protein AD (SpoVAD) DN407_20160 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN407_20165 PF13782 Stage V sporulation protein AB DN407_20170 PF12164 Stage V sporulation protein AA DN407_20180 PF00209 Sodium:neurotransmitter symporter family DN407_20185 PF04542 Sigma-70 region 2 DN407_20185 PF04545 Sigma-70, region 4 DN407_20185 PF04539 Sigma-70 region 3 DN407_20190 PF13581 Histidine kinase-like ATPase domain DN407_20195 PF01740 STAS domain DN407_20200 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_20200 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_20210 PF00392 Bacterial regulatory proteins, gntR family DN407_20215 PF00005 ABC transporter DN407_20230 PF01047 MarR family DN407_20240 PF00860 Permease family DN407_20245 PF01544 CorA-like Mg2+ transporter protein DN407_20250 PF02885 Glycosyl transferase family, helical bundle domain DN407_20250 PF00591 Glycosyl transferase family, a/b domain DN407_20250 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN407_20255 PF01048 Phosphorylase superfamily DN407_20260 PF01676 Metalloenzyme superfamily DN407_20265 PF13115 YtkA-like DN407_20270 PF02899 Phage integrase, N-terminal SAM-like domain DN407_20270 PF00589 Phage integrase family DN407_20275 PF14004 Protein of unknown function (DUF4227) DN407_20280 PF01475 Ferric uptake regulator family DN407_20285 PF01944 Stage II sporulation protein M DN407_20295 PF00293 NUDIX domain DN407_20300 PF13072 Mother cell inhibitor of FtsZ DN407_20305 PF00248 Aldo/keto reductase family DN407_20310 PF00248 Aldo/keto reductase family DN407_20315 PF04229 GrpB protein DN407_20315 PF13673 Acetyltransferase (GNAT) domain DN407_20325 PF00149 Calcineurin-like phosphoesterase DN407_20325 PF00746 LPXTG cell wall anchor motif DN407_20325 PF02872 5'-nucleotidase, C-terminal domain DN407_20325 PF00565 Staphylococcal nuclease homologue DN407_20335 PF12146 Serine aminopeptidase, S33 DN407_20340 PF13726 Na+-H+ antiporter family DN407_20340 PF03553 Na+/H+ antiporter family DN407_20345 PF00356 Bacterial regulatory proteins, lacI family DN407_20350 PF00583 Acetyltransferase (GNAT) family DN407_20355 PF12146 Serine aminopeptidase, S33 DN407_20360 PF10827 Protein of unknown function (DUF2552) DN407_20375 PF01872 RibD C-terminal domain DN407_20375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN407_20380 PF00677 Lumazine binding domain DN407_20385 PF00925 GTP cyclohydrolase II DN407_20385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DN407_20390 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN407_20400 PF04055 Radical SAM superfamily DN407_20400 PF06968 Biotin and Thiamin Synthesis associated domain DN407_20405 PF13847 Methyltransferase domain DN407_20410 PF08241 Methyltransferase domain DN407_20410 PF12697 Alpha/beta hydrolase family DN407_20415 PF00155 Aminotransferase class I and II DN407_20425 PF00202 Aminotransferase class-III DN407_20440 PF00149 Calcineurin-like phosphoesterase DN407_20440 PF02872 5'-nucleotidase, C-terminal domain DN407_20450 PF01037 Lrp/AsnC ligand binding domain DN407_20450 PF13404 AsnC-type helix-turn-helix domain DN407_20465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN407_20465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN407_20470 PF00202 Aminotransferase class-III DN407_20475 PF00696 Amino acid kinase family DN407_20480 PF01960 ArgJ family DN407_20485 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN407_20485 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN407_20495 PF00106 short chain dehydrogenase DN407_20500 PF00753 Metallo-beta-lactamase superfamily DN407_20505 PF03807 NADP oxidoreductase coenzyme F420-dependent DN407_20505 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN407_20510 PF03313 Serine dehydratase alpha chain DN407_20515 PF03315 Serine dehydratase beta chain DN407_20515 PF01842 ACT domain DN407_20525 PF00753 Metallo-beta-lactamase superfamily DN407_20525 PF12706 Beta-lactamase superfamily domain DN407_20540 PF00689 Cation transporting ATPase, C-terminus DN407_20540 PF00690 Cation transporter/ATPase, N-terminus DN407_20545 PF02308 MgtC family DN407_20550 PF11799 impB/mucB/samB family C-terminal domain DN407_20550 PF00817 impB/mucB/samB family DN407_20550 PF11798 IMS family HHH motif DN407_20555 PF07687 Peptidase dimerisation domain DN407_20555 PF01546 Peptidase family M20/M25/M40 DN407_20560 PF13302 Acetyltransferase (GNAT) domain DN407_20570 PF03734 L,D-transpeptidase catalytic domain DN407_20575 PF11728 Putative aromatic acid exporter C-terminal domain DN407_20575 PF06081 Aromatic acid exporter family member 1 DN407_20580 PF00005 ABC transporter DN407_20585 PF00528 Binding-protein-dependent transport system inner membrane component DN407_20590 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN407_20595 PF06491 Disulphide isomerase DN407_20605 PF09297 NADH pyrophosphatase zinc ribbon domain DN407_20605 PF00293 NUDIX domain DN407_20610 PF04239 Protein of unknown function (DUF421) DN407_20615 PF01098 Cell cycle protein DN407_20620 PF00364 Biotin-requiring enzyme DN407_20620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN407_20620 PF02817 e3 binding domain DN407_20625 PF02780 Transketolase, C-terminal domain DN407_20625 PF02779 Transketolase, pyrimidine binding domain DN407_20630 PF00676 Dehydrogenase E1 component DN407_20635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN407_20635 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_20640 PF00871 Acetokinase family DN407_20645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN407_20645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN407_20650 PF01515 Phosphate acetyl/butaryl transferase DN407_20660 PF00158 Sigma-54 interaction domain DN407_20660 PF00989 PAS fold DN407_20660 PF02954 Bacterial regulatory protein, Fis family DN407_20670 PF03009 Glycerophosphoryl diester phosphodiesterase family DN407_20675 PF14174 YycC-like protein DN407_20685 PF00072 Response regulator receiver domain DN407_20685 PF08769 Sporulation initiation factor Spo0A C terminal DN407_20695 PF17820 PDZ domain DN407_20695 PF05580 SpoIVB peptidase S55 DN407_20700 PF13476 AAA domain DN407_20705 PF02863 Arginine repressor, C-terminal domain DN407_20705 PF01316 Arginine repressor, DNA binding domain DN407_20710 PF01728 FtsJ-like methyltransferase DN407_20710 PF01479 S4 domain DN407_20715 PF02780 Transketolase, C-terminal domain DN407_20715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN407_20715 PF02779 Transketolase, pyrimidine binding domain DN407_20720 PF00348 Polyprenyl synthetase DN407_20725 PF02609 Exonuclease VII small subunit DN407_20730 PF02601 Exonuclease VII, large subunit DN407_20730 PF13742 OB-fold nucleic acid binding domain DN407_20735 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN407_20735 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN407_20740 PF01029 NusB family DN407_20745 PF03780 Asp23 family, cell envelope-related function DN407_20750 PF02785 Biotin carboxylase C-terminal domain DN407_20750 PF00289 Biotin carboxylase, N-terminal domain DN407_20750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN407_20755 PF00364 Biotin-requiring enzyme DN407_20765 PF12685 SpoIIIAH-like protein DN407_20775 PF09581 Stage III sporulation protein AF (Spore_III_AF) DN407_20780 PF09546 Stage III sporulation protein AE (spore_III_AE) DN407_20785 PF06686 Stage III sporulation protein AC/AD protein family DN407_20790 PF06686 Stage III sporulation protein AC/AD protein family DN407_20795 PF09548 Stage III sporulation protein AB (spore_III_AB) DN407_20820 PF01132 Elongation factor P (EF-P) OB domain DN407_20820 PF08207 Elongation factor P (EF-P) KOW-like domain DN407_20820 PF09285 Elongation factor P, C-terminal DN407_20825 PF00557 Metallopeptidase family M24 DN407_20825 PF01321 Creatinase/Prolidase N-terminal domain DN407_20830 PF01220 Dehydroquinase class II DN407_20835 PF11085 Conserved membrane protein YqhR DN407_20840 PF07136 Protein of unknown function (DUF1385) DN407_20850 PF13419 Haloacid dehalogenase-like hydrolase DN407_20855 PF02742 Iron dependent repressor, metal binding and dimerisation domain DN407_20855 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN407_20880 PF03099 Biotin/lipoate A/B protein ligase family DN407_20885 PF00581 Rhodanese-like domain DN407_20895 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN407_20895 PF00356 Bacterial regulatory proteins, lacI family DN407_20905 PF00893 Small Multidrug Resistance protein DN407_20910 PF00893 Small Multidrug Resistance protein DN407_20940 PF00005 ABC transporter DN407_20945 PF00392 Bacterial regulatory proteins, gntR family DN407_20960 PF02347 Glycine cleavage system P-protein DN407_20965 PF02347 Glycine cleavage system P-protein DN407_20970 PF02347 Glycine cleavage system P-protein DN407_20975 PF01571 Aminomethyltransferase folate-binding domain DN407_20975 PF08669 Glycine cleavage T-protein C-terminal barrel domain DN407_20980 PF00176 SNF2 family N-terminal domain DN407_20980 PF00271 Helicase conserved C-terminal domain DN407_20985 PF11079 Bacterial protein YqhG of unknown function DN407_21005 PF14038 YqzE-like protein DN407_21010 PF01202 Shikimate kinase DN407_21045 PF00482 Type II secretion system (T2SS), protein F DN407_21050 PF00437 Type II/IV secretion system protein DN407_21060 PF11117 Protein of unknown function (DUF2626) DN407_21065 PF00375 Sodium:dicarboxylate symporter family DN407_21100 PF03033 Glycosyltransferase family 28 N-terminal domain DN407_21100 PF04101 Glycosyltransferase family 28 C-terminal domain DN407_21105 PF02574 Homocysteine S-methyltransferase DN407_21105 PF02310 B12 binding domain DN407_21105 PF02607 B12 binding domain DN407_21105 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN407_21105 PF00809 Pterin binding enzyme DN407_21110 PF02574 Homocysteine S-methyltransferase DN407_21110 PF02219 Methylenetetrahydrofolate reductase DN407_21115 PF01053 Cys/Met metabolism PLP-dependent enzyme DN407_21120 PF01053 Cys/Met metabolism PLP-dependent enzyme DN407_21130 PF01022 Bacterial regulatory protein, arsR family DN407_21140 PF00753 Metallo-beta-lactamase superfamily DN407_21145 PF10958 Protein of unknown function (DUF2759) DN407_21150 PF00480 ROK family DN407_21155 PF06014 Bacterial protein of unknown function (DUF910) DN407_21160 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN407_21165 PF00471 Ribosomal protein L33 DN407_21170 PF00483 Nucleotidyl transferase DN407_21175 PF01895 PhoU domain DN407_21180 PF00005 ABC transporter DN407_21185 PF00528 Binding-protein-dependent transport system inner membrane component DN407_21190 PF00528 Binding-protein-dependent transport system inner membrane component DN407_21195 PF12849 PBP superfamily domain DN407_21205 PF07690 Major Facilitator Superfamily DN407_21210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN407_21210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN407_21220 PF06691 Protein of unknown function (DUF1189) DN407_21230 PF04551 GcpE protein DN407_21235 PF01475 Ferric uptake regulator family DN407_21240 PF00950 ABC 3 transport family DN407_21245 PF00005 ABC transporter DN407_21250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_21250 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_21255 PF11116 Protein of unknown function (DUF2624) DN407_21260 PF01261 Xylose isomerase-like TIM barrel DN407_21265 PF00271 Helicase conserved C-terminal domain DN407_21265 PF00270 DEAD/DEAH box helicase DN407_21275 PF02401 LytB protein DN407_21280 PF01784 NIF3 (NGG1p interacting factor 3) DN407_21285 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DN407_21290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN407_21295 PF00140 Sigma-70 factor, region 1.2 DN407_21295 PF04542 Sigma-70 region 2 DN407_21295 PF04539 Sigma-70 region 3 DN407_21295 PF04545 Sigma-70, region 4 DN407_21295 PF03979 Sigma-70 factor, region 1.1 DN407_21300 PF08275 DNA primase catalytic core, N-terminal domain DN407_21300 PF10410 DnaB-helicase binding domain of primase DN407_21300 PF01807 CHC2 zinc finger DN407_21305 PF03618 Kinase/pyrophosphorylase DN407_21310 PF00571 CBS domain DN407_21310 PF08279 HTH domain DN407_21315 PF02565 Recombination protein O C terminal DN407_21315 PF11967 Recombination protein O N terminal DN407_21325 PF07650 KH domain DN407_21325 PF01926 50S ribosome-binding GTPase DN407_21330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN407_21335 PF01219 Prokaryotic diacylglycerol kinase DN407_21340 PF02130 Uncharacterized protein family UPF0054 DN407_21345 PF07698 7TM receptor with intracellular HD hydrolase DN407_21345 PF01966 HD domain DN407_21345 PF07697 7TM-HD extracellular DN407_21350 PF02562 PhoH-like protein DN407_21355 PF06898 Putative stage IV sporulation protein YqfD DN407_21360 PF07873 YabP family DN407_21370 PF09424 Yqey-like protein DN407_21375 PF01165 Ribosomal protein S21 DN407_21385 PF00919 Uncharacterized protein family UPF0004 DN407_21385 PF01938 TRAM domain DN407_21385 PF04055 Radical SAM superfamily DN407_21390 PF04452 RNA methyltransferase DN407_21400 PF01556 DnaJ C terminal domain DN407_21400 PF00226 DnaJ domain DN407_21400 PF00684 DnaJ central domain DN407_21405 PF00012 Hsp70 protein DN407_21410 PF01025 GrpE DN407_21415 PF01628 HrcA protein C terminal domain DN407_21420 PF04055 Radical SAM superfamily DN407_21420 PF06969 HemN C-terminal domain DN407_21425 PF01638 HxlR-like helix-turn-helix DN407_21430 PF03144 Elongation factor Tu domain 2 DN407_21430 PF06421 GTP-binding protein LepA C-terminus DN407_21430 PF00679 Elongation factor G C-terminus DN407_21430 PF00009 Elongation factor Tu GTP binding domain DN407_21440 PF03418 Germination protease DN407_21445 PF01649 Ribosomal protein S20 DN407_21450 PF06144 DNA polymerase III, delta subunit DN407_21455 PF14141 YqzM-like protein DN407_21460 PF00753 Metallo-beta-lactamase superfamily DN407_21460 PF13567 Domain of unknown function (DUF4131) DN407_21460 PF03772 Competence protein DN407_21465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN407_21470 PF10531 SLBB domain DN407_21475 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN407_21475 PF03807 NADP oxidoreductase coenzyme F420-dependent DN407_21480 PF13649 Methyltransferase domain DN407_21490 PF01966 HD domain DN407_21495 PF01467 Cytidylyltransferase-like DN407_21500 PF01985 CRS1 / YhbY (CRM) domain DN407_21505 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DN407_21505 PF01488 Shikimate / quinate 5-dehydrogenase DN407_21505 PF08501 Shikimate dehydrogenase substrate binding domain DN407_21510 PF01926 50S ribosome-binding GTPase DN407_21525 PF02666 Phosphatidylserine decarboxylase DN407_21530 PF04545 Sigma-70, region 4 DN407_21530 PF04542 Sigma-70 region 2 DN407_21540 PF16244 Domain of unknown function (DUF4901) DN407_21545 PF00471 Ribosomal protein L33 DN407_21550 PF00881 Nitroreductase family DN407_21555 PF04607 Region found in RelA / SpoT proteins DN407_21565 PF00245 Alkaline phosphatase DN407_21570 PF00583 Acetyltransferase (GNAT) family DN407_21575 PF08386 TAP-like protein DN407_21575 PF00561 alpha/beta hydrolase fold DN407_21615 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DN407_21625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN407_21630 PF07681 DoxX DN407_21660 PF00005 ABC transporter DN407_21665 PF01032 FecCD transport family DN407_21670 PF01497 Periplasmic binding protein DN407_21680 PF14143 YrhC-like protein DN407_21685 PF00465 Iron-containing alcohol dehydrogenase DN407_21685 PF00171 Aldehyde dehydrogenase family DN407_21690 PF01053 Cys/Met metabolism PLP-dependent enzyme DN407_21695 PF00291 Pyridoxal-phosphate dependent enzyme DN407_21700 PF01048 Phosphorylase superfamily DN407_21705 PF08241 Methyltransferase domain DN407_21720 PF03717 Penicillin-binding Protein dimerisation domain DN407_21720 PF00905 Penicillin binding protein transpeptidase domain DN407_21730 PF01272 Transcription elongation factor, GreA/GreB, C-term DN407_21730 PF03449 Transcription elongation factor, N-terminal DN407_21735 PF00485 Phosphoribulokinase / Uridine kinase family DN407_21755 PF02618 YceG-like family DN407_21760 PF06949 Protein of unknown function (DUF1292) DN407_21765 PF03652 Holliday junction resolvase DN407_21770 PF06135 IreB regulatory phosphoprotein DN407_21775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN407_21775 PF01411 tRNA synthetases class II (A) DN407_21775 PF02272 DHHA1 domain DN407_21785 PF01594 AI-2E family transporter DN407_21805 PF14490 Helix-hairpin-helix containing domain DN407_21805 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN407_21805 PF13538 UvrD-like helicase C-terminal domain DN407_21820 PF00266 Aminotransferase class-V DN407_21825 PF02082 Transcriptional regulator DN407_21830 PF16193 AAA C-terminal domain DN407_21830 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN407_21830 PF12002 MgsA AAA+ ATPase C terminal DN407_21845 PF00899 ThiF family DN407_21855 PF00152 tRNA synthetases class II (D, K and N) DN407_21855 PF02938 GAD domain DN407_21855 PF01336 OB-fold nucleic acid binding domain DN407_21860 PF03129 Anticodon binding domain DN407_21860 PF13393 Histidyl-tRNA synthetase DN407_21865 PF02580 D-Tyr-tRNA(Tyr) deacylase DN407_21870 PF13291 ACT domain DN407_21870 PF02824 TGS domain DN407_21870 PF04607 Region found in RelA / SpoT proteins DN407_21875 PF00156 Phosphoribosyl transferase domain DN407_21880 PF01368 DHH family DN407_21880 PF02272 DHHA1 domain DN407_21880 PF17768 RecJ OB domain DN407_21880 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DN407_21885 PF01545 Cation efflux family DN407_21885 PF16916 Dimerisation domain of Zinc Transporter DN407_21890 PF02355 Protein export membrane protein DN407_21890 PF07549 SecD/SecF GG Motif DN407_21895 PF13797 Post-transcriptional regulator DN407_21900 PF14667 Polysaccharide biosynthesis C-terminal domain DN407_21900 PF01943 Polysaccharide biosynthesis protein DN407_21905 PF04239 Protein of unknown function (DUF421) DN407_21915 PF02699 Preprotein translocase subunit DN407_21920 PF01702 Queuine tRNA-ribosyltransferase DN407_21925 PF02547 Queuosine biosynthesis protein DN407_21930 PF11146 Protein of unknown function (DUF2905) DN407_21935 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN407_21935 PF05491 RuvB C-terminal winged helix domain DN407_21935 PF17864 RuvB AAA lid domain DN407_21940 PF07499 RuvA, C-terminal domain DN407_21940 PF01330 RuvA N terminal domain DN407_21945 PF01497 Periplasmic binding protein DN407_21965 PF01476 LysM domain DN407_21970 PF02445 Quinolinate synthetase A protein DN407_21975 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DN407_21975 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DN407_21980 PF02910 Fumarate reductase flavoprotein C-term DN407_21980 PF00890 FAD binding domain DN407_21985 PF00266 Aminotransferase class-V DN407_21990 PF02829 3H domain DN407_21990 PF08279 HTH domain DN407_21995 PF03473 MOSC domain DN407_21995 PF03475 3-alpha domain DN407_22010 PF01842 ACT domain DN407_22010 PF00800 Prephenate dehydratase DN407_22015 PF02687 FtsX-like permease family DN407_22020 PF02687 FtsX-like permease family DN407_22025 PF00005 ABC transporter DN407_22030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_22035 PF00486 Transcriptional regulatory protein, C terminal DN407_22035 PF00072 Response regulator receiver domain DN407_22040 PF09269 Domain of unknown function (DUF1967) DN407_22040 PF01018 GTP1/OBG DN407_22040 PF01926 50S ribosome-binding GTPase DN407_22045 PF14682 Sporulation initiation phospho-transferase B, C-terminal DN407_22045 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN407_22055 PF00829 Ribosomal prokaryotic L21 protein DN407_22060 PF10150 Ribonuclease E/G family DN407_22060 PF00575 S1 RNA binding domain DN407_22065 PF02163 Peptidase family M50 DN407_22070 PF01551 Peptidase family M23 DN407_22075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN407_22080 PF03775 Septum formation inhibitor MinC, C-terminal domain DN407_22090 PF04085 rod shape-determining protein MreC DN407_22100 PF04002 RadC-like JAB domain DN407_22105 PF02545 Maf-like protein DN407_22115 PF02875 Mur ligase family, glutamate ligase domain DN407_22115 PF08245 Mur ligase middle domain DN407_22120 PF10458 Valyl tRNA synthetase tRNA binding arm DN407_22120 PF08264 Anticodon-binding domain of tRNA DN407_22120 PF00133 tRNA synthetases class I (I, L, M and V) DN407_22135 PF01476 LysM domain DN407_22140 PF00202 Aminotransferase class-III DN407_22145 PF00490 Delta-aminolevulinic acid dehydratase DN407_22150 PF02602 Uroporphyrinogen-III synthase HemD DN407_22155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DN407_22155 PF03900 Porphobilinogen deaminase, C-terminal domain DN407_22160 PF01578 Cytochrome C assembly protein DN407_22165 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DN407_22165 PF01488 Shikimate / quinate 5-dehydrogenase DN407_22165 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DN407_22170 PF01047 MarR family DN407_22175 PF02566 OsmC-like protein DN407_22180 PF01926 50S ribosome-binding GTPase DN407_22185 PF05362 Lon protease (S16) C-terminal proteolytic domain DN407_22185 PF00004 ATPase family associated with various cellular activities (AAA) DN407_22185 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN407_22190 PF00004 ATPase family associated with various cellular activities (AAA) DN407_22190 PF05362 Lon protease (S16) C-terminal proteolytic domain DN407_22195 PF07724 AAA domain (Cdc48 subfamily) DN407_22195 PF06689 ClpX C4-type zinc finger DN407_22195 PF10431 C-terminal, D2-small domain, of ClpB protein DN407_22200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN407_22200 PF05697 Bacterial trigger factor protein (TF) DN407_22200 PF05698 Bacterial trigger factor protein (TF) C-terminus DN407_22215 PF11724 YvbH-like oligomerisation region DN407_22215 PF08000 Bacterial PH domain DN407_22235 PF12850 Calcineurin-like phosphoesterase superfamily domain DN407_22240 PF01725 Ham1 family DN407_22245 PF01138 3' exoribonuclease family, domain 1 DN407_22245 PF03725 3' exoribonuclease family, domain 2 DN407_22250 PF10646 Sporulation and spore germination DN407_22255 PF01177 Asp/Glu/Hydantoin racemase DN407_22265 PF00196 Bacterial regulatory proteins, luxR family DN407_22270 PF00860 Permease family DN407_22275 PF07969 Amidohydrolase family DN407_22280 PF04024 PspC domain DN407_22285 PF01381 Helix-turn-helix DN407_22285 PF07883 Cupin domain DN407_22290 PF13536 Putative multidrug resistance efflux transporter DN407_22295 PF00230 Major intrinsic protein DN407_22300 PF02082 Transcriptional regulator DN407_22310 PF13732 Domain of unknown function (DUF4162) DN407_22310 PF00005 ABC transporter DN407_22315 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DN407_22320 PF00691 OmpA family DN407_22320 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN407_22325 PF01618 MotA/TolQ/ExbB proton channel family DN407_22330 PF02557 D-alanyl-D-alanine carboxypeptidase DN407_22335 PF03061 Thioesterase superfamily DN407_22340 PF13085 2Fe-2S iron-sulfur cluster binding domain DN407_22340 PF13183 4Fe-4S dicluster domain DN407_22345 PF02910 Fumarate reductase flavoprotein C-term DN407_22345 PF00890 FAD binding domain DN407_22350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DN407_22355 PF10702 Protein of unknown function (DUF2507) DN407_22360 PF08459 UvrC Helix-hairpin-helix N-terminal DN407_22360 PF01541 GIY-YIG catalytic domain DN407_22360 PF02151 UvrB/uvrC motif DN407_22365 PF00085 Thioredoxin DN407_22370 PF00766 Electron transfer flavoprotein FAD-binding domain DN407_22370 PF01012 Electron transfer flavoprotein domain DN407_22375 PF01012 Electron transfer flavoprotein domain DN407_22380 PF00378 Enoyl-CoA hydratase/isomerase DN407_22385 PF00440 Bacterial regulatory proteins, tetR family DN407_22385 PF08359 YsiA-like protein, C-terminal region DN407_22390 PF00501 AMP-binding enzyme DN407_22390 PF13193 AMP-binding enzyme C-terminal domain DN407_22415 PF05163 DinB family DN407_22440 PF00005 ABC transporter DN407_22445 PF00512 His Kinase A (phospho-acceptor) domain DN407_22445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_22450 PF00072 Response regulator receiver domain DN407_22450 PF00486 Transcriptional regulatory protein, C terminal DN407_22455 PF09962 Uncharacterized conserved protein (DUF2196) DN407_22460 PF10672 S-adenosylmethionine-dependent methyltransferase DN407_22460 PF17785 PUA-like domain DN407_22465 PF03992 Antibiotic biosynthesis monooxygenase DN407_22470 PF04203 Sortase domain DN407_22475 PF00005 ABC transporter DN407_22480 PF01032 FecCD transport family DN407_22485 PF01497 Periplasmic binding protein DN407_22490 PF05031 Iron Transport-associated domain DN407_22500 PF05031 Iron Transport-associated domain DN407_22505 PF05525 Branched-chain amino acid transport protein DN407_22510 PF00849 RNA pseudouridylate synthase DN407_22510 PF01479 S4 domain DN407_22515 PF01713 Smr domain DN407_22515 PF00488 MutS domain V DN407_22520 PF02811 PHP domain DN407_22520 PF14716 Helix-hairpin-helix domain DN407_22520 PF14791 DNA polymerase beta thumb DN407_22525 PF02674 Colicin V production protein DN407_22530 PF05164 Cell division protein ZapA DN407_22535 PF01351 Ribonuclease HII DN407_22535 PF11858 Domain of unknown function (DUF3378) DN407_22555 PF01336 OB-fold nucleic acid binding domain DN407_22555 PF00152 tRNA synthetases class II (D, K and N) DN407_22560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN407_22560 PF03483 B3/4 domain DN407_22560 PF03484 tRNA synthetase B5 domain DN407_22560 PF03147 Ferredoxin-fold anticodon binding domain DN407_22560 PF01588 Putative tRNA binding domain DN407_22565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DN407_22565 PF01409 tRNA synthetases class II core domain (F) DN407_22570 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN407_22570 PF00588 SpoU rRNA Methylase family DN407_22575 PF14098 Small, acid-soluble spore protein I DN407_22580 PF01966 HD domain DN407_22600 PF07690 Major Facilitator Superfamily DN407_22610 PF00440 Bacterial regulatory proteins, tetR family DN407_22610 PF16859 Tetracyclin repressor-like, C-terminal domain DN407_22615 PF05343 M42 glutamyl aminopeptidase DN407_22625 PF00453 Ribosomal protein L20 DN407_22630 PF01632 Ribosomal protein L35 DN407_22635 PF00707 Translation initiation factor IF-3, C-terminal domain DN407_22635 PF05198 Translation initiation factor IF-3, N-terminal domain DN407_22640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN407_22640 PF03129 Anticodon binding domain DN407_22640 PF02824 TGS domain DN407_22640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN407_22645 PF08812 YtxC-like family DN407_22650 PF13783 Domain of unknown function (DUF4177) DN407_22655 PF01695 IstB-like ATP binding protein DN407_22655 PF07319 Primosomal protein DnaI N-terminus DN407_22660 PF07261 Replication initiation and membrane attachment DN407_22665 PF03477 ATP cone domain DN407_22670 PF02675 S-adenosylmethionine decarboxylase DN407_22675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN407_22675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN407_22680 PF01121 Dephospho-CoA kinase DN407_22685 PF02659 Putative manganese efflux pump DN407_22690 PF06827 Zinc finger found in FPG and IleRS DN407_22690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DN407_22690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DN407_22695 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN407_22695 PF01367 5'-3' exonuclease, C-terminal SAM fold DN407_22695 PF00476 DNA polymerase family A DN407_22700 PF16736 Single Cache-like DN407_22700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_22700 PF00512 His Kinase A (phospho-acceptor) domain DN407_22700 PF00989 PAS fold DN407_22705 PF00072 Response regulator receiver domain DN407_22705 PF00486 Transcriptional regulatory protein, C terminal DN407_22720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN407_22720 PF00056 lactate/malate dehydrogenase, NAD binding domain DN407_22725 PF00180 Isocitrate/isopropylmalate dehydrogenase DN407_22730 PF00285 Citrate synthase, C-terminal domain DN407_22740 PF04284 Protein of unknown function (DUF441) DN407_22745 PF01594 AI-2E family transporter DN407_22750 PF04186 FxsA cytoplasmic membrane protein DN407_22755 PF02887 Pyruvate kinase, alpha/beta domain DN407_22755 PF00391 PEP-utilising enzyme, mobile domain DN407_22755 PF00224 Pyruvate kinase, barrel domain DN407_22760 PF00365 Phosphofructokinase DN407_22765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN407_22770 PF01039 Carboxyl transferase domain DN407_22770 PF17848 Acetyl-coA carboxylase zinc finger domain DN407_22775 PF00392 Bacterial regulatory proteins, gntR family DN407_22780 PF03949 Malic enzyme, NAD binding domain DN407_22780 PF00390 Malic enzyme, N-terminal domain DN407_22785 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN407_22785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN407_22785 PF14579 Helix-hairpin-helix motif DN407_22785 PF02811 PHP domain DN407_22785 PF01336 OB-fold nucleic acid binding domain DN407_22790 PF14034 Sporulation protein YtrH DN407_22800 PF02272 DHHA1 domain DN407_22800 PF01368 DHH family DN407_22805 PF14007 YtpI-like protein DN407_22815 PF00392 Bacterial regulatory proteins, gntR family DN407_22815 PF07085 DRTGG domain DN407_22815 PF00571 CBS domain DN407_22815 PF03061 Thioesterase superfamily DN407_22825 PF00557 Metallopeptidase family M24 DN407_22825 PF01321 Creatinase/Prolidase N-terminal domain DN407_22870 PF07883 Cupin domain DN407_22880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN407_22880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN407_22890 PF00582 Universal stress protein family DN407_22905 PF00206 Lyase DN407_22905 PF14698 Argininosuccinate lyase C-terminal DN407_22910 PF00764 Arginosuccinate synthase DN407_22925 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_22925 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_22930 PF12787 EcsC protein family DN407_22945 PF00871 Acetokinase family DN407_22950 PF02384 N-6 DNA Methylase DN407_22955 PF08534 Redoxin DN407_22960 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN407_22970 PF01513 ATP-NAD kinase DN407_22975 PF07969 Amidohydrolase family DN407_22985 PF00501 AMP-binding enzyme DN407_22985 PF13193 AMP-binding enzyme C-terminal domain DN407_22990 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_22995 PF02926 THUMP domain DN407_22995 PF02568 Thiamine biosynthesis protein (ThiI) DN407_23000 PF00266 Aminotransferase class-V DN407_23005 PF06160 Septation ring formation regulator, EzrA DN407_23010 PF03466 LysR substrate binding domain DN407_23010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_23015 PF00892 EamA-like transporter family DN407_23020 PF00440 Bacterial regulatory proteins, tetR family DN407_23025 PF13185 GAF domain DN407_23030 PF01053 Cys/Met metabolism PLP-dependent enzyme DN407_23035 PF01479 S4 domain DN407_23035 PF00163 Ribosomal protein S4/S9 N-terminal domain DN407_23040 PF04740 LXG domain of WXG superfamily DN407_23040 PF14436 Bacterial EndoU nuclease DN407_23075 PF00579 tRNA synthetases class I (W and Y) DN407_23075 PF01479 S4 domain DN407_23085 PF04542 Sigma-70 region 2 DN407_23085 PF08281 Sigma-70, region 4 DN407_23095 PF12464 Maltose acetyltransferase DN407_23095 PF14602 Hexapeptide repeat of succinyl-transferase DN407_23100 PF00501 AMP-binding enzyme DN407_23100 PF13193 AMP-binding enzyme C-terminal domain DN407_23105 PF00583 Acetyltransferase (GNAT) family DN407_23110 PF00571 CBS domain DN407_23115 PF00850 Histone deacetylase domain DN407_23130 PF00486 Transcriptional regulatory protein, C terminal DN407_23130 PF00072 Response regulator receiver domain DN407_23135 PF16736 Single Cache-like DN407_23135 PF00512 His Kinase A (phospho-acceptor) domain DN407_23135 PF00989 PAS fold DN407_23135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_23140 PF12796 Ankyrin repeats (3 copies) DN407_23145 PF06580 Histidine kinase DN407_23145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_23165 PF04397 LytTr DNA-binding domain DN407_23165 PF00072 Response regulator receiver domain DN407_23170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN407_23175 PF01741 Large-conductance mechanosensitive channel, MscL DN407_23190 PF00356 Bacterial regulatory proteins, lacI family DN407_23195 PF01817 Chorismate mutase type II DN407_23195 PF00793 DAHP synthetase I family DN407_23200 PF07537 CamS sex pheromone cAM373 precursor DN407_23205 PF11009 Protein of unknown function (DUF2847) DN407_23215 PF02073 Thermophilic metalloprotease (M29) DN407_23230 PF13302 Acetyltransferase (GNAT) domain DN407_23235 PF01225 Mur ligase family, catalytic domain DN407_23235 PF08245 Mur ligase middle domain DN407_23235 PF02875 Mur ligase family, glutamate ligase domain DN407_23245 PF09397 Ftsk gamma domain DN407_23245 PF01580 FtsK/SpoIIIE family DN407_23245 PF17854 FtsK alpha domain DN407_23250 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_23250 PF01476 LysM domain DN407_23260 PF14794 Domain of unknown function (DUF4479) DN407_23260 PF01588 Putative tRNA binding domain DN407_23265 PF07285 Protein of unknown function (DUF1444) DN407_23270 PF00085 Thioredoxin DN407_23275 PF01931 Protein of unknown function DUF84 DN407_23280 PF05343 M42 glutamyl aminopeptidase DN407_23290 PF00753 Metallo-beta-lactamase superfamily DN407_23295 PF02390 Putative methyltransferase DN407_23300 PF14165 YtzH-like protein DN407_23305 PF01636 Phosphotransferase enzyme family DN407_23310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN407_23310 PF17999 Pullulanase N1-terminal domain DN407_23310 PF00128 Alpha amylase, catalytic domain DN407_23315 PF02834 LigT like Phosphoesterase DN407_23320 PF01546 Peptidase family M20/M25/M40 DN407_23325 PF08220 DeoR-like helix-turn-helix domain DN407_23330 PF00849 RNA pseudouridylate synthase DN407_23330 PF01479 S4 domain DN407_23335 PF01943 Polysaccharide biosynthesis protein DN407_23335 PF14667 Polysaccharide biosynthesis C-terminal domain DN407_23345 PF07690 Major Facilitator Superfamily DN407_23350 PF01022 Bacterial regulatory protein, arsR family DN407_23355 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DN407_23365 PF10957 Sporulation protein Cse60 DN407_23375 PF02559 CarD-like/TRCF domain DN407_23385 PF06800 Sugar transport protein DN407_23400 PF02391 MoaE protein DN407_23405 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DN407_23410 PF03453 MoeA N-terminal region (domain I and II) DN407_23410 PF00994 Probable molybdopterin binding domain DN407_23410 PF03454 MoeA C-terminal region (domain IV) DN407_23415 PF01967 MoaC family DN407_23420 PF00899 ThiF family DN407_23425 PF04055 Radical SAM superfamily DN407_23425 PF06463 Molybdenum Cofactor Synthesis C DN407_23450 PF00581 Rhodanese-like domain DN407_23460 PF00561 alpha/beta hydrolase fold DN407_23465 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_23470 PF03845 Spore germination protein DN407_23500 PF09334 tRNA synthetases class I (M) DN407_23500 PF13603 Leucyl-tRNA synthetase, Domain 2 DN407_23500 PF00133 tRNA synthetases class I (I, L, M and V) DN407_23500 PF08264 Anticodon-binding domain of tRNA DN407_23505 PF07690 Major Facilitator Superfamily DN407_23510 PF00999 Sodium/hydrogen exchanger family DN407_23515 PF02080 TrkA-C domain DN407_23520 PF00589 Phage integrase family DN407_23535 PF00005 ABC transporter DN407_23540 PF07786 Protein of unknown function (DUF1624) DN407_23540 PF04235 Protein of unknown function (DUF418) DN407_23550 PF10732 Protein of unknown function (DUF2524) DN407_23555 PF16199 Radical_SAM C-terminal domain DN407_23555 PF04055 Radical SAM superfamily DN407_23560 PF06962 Putative rRNA methylase DN407_23570 PF00005 ABC transporter DN407_23570 PF13732 Domain of unknown function (DUF4162) DN407_23580 PF01177 Asp/Glu/Hydantoin racemase DN407_23595 PF10776 Protein of unknown function (DUF2600) DN407_23600 PF12146 Serine aminopeptidase, S33 DN407_23605 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_23610 PF01569 PAP2 superfamily DN407_23615 PF13439 Glycosyltransferase Family 4 DN407_23615 PF00534 Glycosyl transferases group 1 DN407_23620 PF12804 MobA-like NTP transferase domain DN407_23625 PF00994 Probable molybdopterin binding domain DN407_23640 PF13302 Acetyltransferase (GNAT) domain DN407_23645 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN407_23645 PF02772 S-adenosylmethionine synthetase, central domain DN407_23645 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN407_23650 PF01293 Phosphoenolpyruvate carboxykinase DN407_23680 PF00989 PAS fold DN407_23680 PF00512 His Kinase A (phospho-acceptor) domain DN407_23680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_23680 PF13188 PAS domain DN407_23680 PF13426 PAS domain DN407_23685 PF00512 His Kinase A (phospho-acceptor) domain DN407_23685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_23685 PF02743 Cache domain DN407_23690 PF08386 TAP-like protein DN407_23690 PF00561 alpha/beta hydrolase fold DN407_23695 PF00884 Sulfatase DN407_23725 PF00005 ABC transporter DN407_23730 PF00528 Binding-protein-dependent transport system inner membrane component DN407_23745 PF13419 Haloacid dehalogenase-like hydrolase DN407_23755 PF00293 NUDIX domain DN407_23790 PF02664 S-Ribosylhomocysteinase (LuxS) DN407_23795 PF01809 Putative membrane protein insertion efficiency factor DN407_23800 PF00484 Carbonic anhydrase DN407_23805 PF01654 Cytochrome bd terminal oxidase subunit I DN407_23810 PF02322 Cytochrome bd terminal oxidase subunit II DN407_23815 PF10676 Spore germination protein gerPA/gerPF DN407_23825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_23825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_23845 PF04012 PspA/IM30 family DN407_23860 PF02421 Ferrous iron transport protein B DN407_23860 PF07670 Nucleoside recognition DN407_23860 PF17910 FeoB cytosolic helical domain DN407_23860 PF07664 Ferrous iron transport protein B C terminus DN407_23870 PF09515 Thiamine transporter protein (Thia_YuaJ) DN407_23875 PF00672 HAMP domain DN407_23875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_23875 PF00512 His Kinase A (phospho-acceptor) domain DN407_23880 PF00072 Response regulator receiver domain DN407_23880 PF00486 Transcriptional regulatory protein, C terminal DN407_23910 PF00781 Diacylglycerol kinase catalytic domain DN407_23940 PF09335 SNARE associated Golgi protein DN407_23945 PF00398 Ribosomal RNA adenine dimethylase DN407_23950 PF02687 FtsX-like permease family DN407_23955 PF00005 ABC transporter DN407_23960 PF06445 GyrI-like small molecule binding domain DN407_23960 PF12833 Helix-turn-helix domain DN407_23980 PF07853 Protein of unknown function (DUF1648) DN407_23980 PF13630 SdpI/YhfL protein family DN407_23985 PF01022 Bacterial regulatory protein, arsR family DN407_23990 PF00072 Response regulator receiver domain DN407_23990 PF00486 Transcriptional regulatory protein, C terminal DN407_23995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_24000 PF02687 FtsX-like permease family DN407_24005 PF02687 FtsX-like permease family DN407_24010 PF00005 ABC transporter DN407_24015 PF02687 FtsX-like permease family DN407_24025 PF00440 Bacterial regulatory proteins, tetR family DN407_24025 PF13977 BetI-type transcriptional repressor, C-terminal DN407_24035 PF02447 GntP family permease DN407_24050 PF07071 KDGP aldolase DN407_24055 PF03841 L-seryl-tRNA selenium transferase DN407_24060 PF01979 Amidohydrolase family DN407_24065 PF02557 D-alanyl-D-alanine carboxypeptidase DN407_24070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_24070 PF00512 His Kinase A (phospho-acceptor) domain DN407_24075 PF00072 Response regulator receiver domain DN407_24075 PF00486 Transcriptional regulatory protein, C terminal DN407_24080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN407_24080 PF13378 Enolase C-terminal domain-like DN407_24085 PF00501 AMP-binding enzyme DN407_24085 PF13193 AMP-binding enzyme C-terminal domain DN407_24090 PF00378 Enoyl-CoA hydratase/isomerase DN407_24095 PF12697 Alpha/beta hydrolase family DN407_24100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_24100 PF16582 Middle domain of thiamine pyrophosphate DN407_24100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN407_24105 PF00425 chorismate binding enzyme DN407_24110 PF01040 UbiA prenyltransferase family DN407_24115 PF01258 Prokaryotic dksA/traR C4-type zinc finger DN407_24120 PF00313 'Cold-shock' DNA-binding domain DN407_24135 PF00343 Carbohydrate phosphorylase DN407_24140 PF00534 Glycosyl transferases group 1 DN407_24140 PF08323 Starch synthase catalytic domain DN407_24145 PF00483 Nucleotidyl transferase DN407_24150 PF00483 Nucleotidyl transferase DN407_24155 PF02806 Alpha amylase, C-terminal all-beta domain DN407_24155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN407_24155 PF00128 Alpha amylase, catalytic domain DN407_24175 PF00056 lactate/malate dehydrogenase, NAD binding domain DN407_24175 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN407_24270 PF05698 Bacterial trigger factor protein (TF) C-terminus DN407_24270 PF05697 Bacterial trigger factor protein (TF) DN407_24305 PF02308 MgtC family DN407_24310 PF07885 Ion channel DN407_24310 PF02254 TrkA-N domain DN407_24315 PF08868 YugN-like family DN407_24320 PF00342 Phosphoglucose isomerase DN407_24330 PF04070 Domain of unknown function (DUF378) DN407_24335 PF00575 S1 RNA binding domain DN407_24340 PF00155 Aminotransferase class I and II DN407_24345 PF01037 Lrp/AsnC ligand binding domain DN407_24350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN407_24350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN407_24355 PF08386 TAP-like protein DN407_24355 PF00561 alpha/beta hydrolase fold DN407_24365 PF00155 Aminotransferase class I and II DN407_24375 PF08810 Kinase associated protein B DN407_24380 PF00929 Exonuclease DN407_24385 PF03600 Citrate transporter DN407_24400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN407_24400 PF03129 Anticodon binding domain DN407_24405 PF03061 Thioesterase superfamily DN407_24415 PF02632 BioY family DN407_24420 PF00483 Nucleotidyl transferase DN407_24425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN407_24425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN407_24425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN407_24425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN407_24430 PF10372 Bacterial membrane-spanning protein N-terminus DN407_24430 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN407_24435 PF00883 Cytosol aminopeptidase family, catalytic domain DN407_24435 PF02789 Cytosol aminopeptidase family, N-terminal domain DN407_24440 PF06725 3D domain DN407_24450 PF13344 Haloacid dehalogenase-like hydrolase DN407_24450 PF00293 NUDIX domain DN407_24455 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_24460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_24470 PF06445 GyrI-like small molecule binding domain DN407_24485 PF04463 Protein of unknown function (DUF523) DN407_24500 PF01521 Iron-sulphur cluster biosynthesis DN407_24505 PF01678 Diaminopimelate epimerase DN407_24510 PF07293 Protein of unknown function (DUF1450) DN407_24515 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_24525 PF00005 ABC transporter DN407_24525 PF03412 Peptidase C39 family DN407_24525 PF00664 ABC transporter transmembrane region DN407_24530 PF03649 Uncharacterised protein family (UPF0014) DN407_24535 PF03831 PhnA domain DN407_24535 PF08274 PhnA Zinc-Ribbon DN407_24560 PF07315 Protein of unknown function (DUF1462) DN407_24565 PF01106 NifU-like domain DN407_24580 PF04608 Phosphatidylglycerophosphatase A DN407_24600 PF15608 PELOTA RNA binding domain DN407_24600 PF11202 Phosphoribosyl transferase (PRTase) DN407_24615 PF02525 Flavodoxin-like fold DN407_24620 PF13344 Haloacid dehalogenase-like hydrolase DN407_24630 PF01934 Protein of unknown function DUF86 DN407_24635 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN407_24650 PF06265 Protein of unknown function (DUF1027) DN407_24655 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN407_24660 PF13411 MerR HTH family regulatory protein DN407_24660 PF07739 TipAS antibiotic-recognition domain DN407_24665 PF10086 YhfC intramembrane metalloprotease DN407_24685 PF04055 Radical SAM superfamily DN407_24685 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DN407_24690 PF01551 Peptidase family M23 DN407_24695 PF09560 Sporulation protein YunB (Spo_YunB) DN407_24700 PF08827 Domain of unknown function (DUF1805) DN407_24705 PF02872 5'-nucleotidase, C-terminal domain DN407_24715 PF01458 Uncharacterized protein family (UPF0051) DN407_24720 PF01592 NifU-like N terminal domain DN407_24725 PF00266 Aminotransferase class-V DN407_24730 PF01458 Uncharacterized protein family (UPF0051) DN407_24735 PF00005 ABC transporter DN407_24740 PF03180 NLPA lipoprotein DN407_24745 PF03180 NLPA lipoprotein DN407_24750 PF00528 Binding-protein-dependent transport system inner membrane component DN407_24755 PF09383 NIL domain DN407_24755 PF00005 ABC transporter DN407_24765 PF00085 Thioredoxin DN407_24770 PF01751 Toprim domain DN407_24775 PF01597 Glycine cleavage H-protein DN407_24780 PF03960 ArsC family DN407_24800 PF00056 lactate/malate dehydrogenase, NAD binding domain DN407_24800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN407_24820 PF00440 Bacterial regulatory proteins, tetR family DN407_24820 PF13305 Tetracyclin repressor-like, C-terminal domain DN407_24825 PF00753 Metallo-beta-lactamase superfamily DN407_24830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN407_24830 PF02770 Acyl-CoA dehydrogenase, middle domain DN407_24830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN407_24835 PF02803 Thiolase, C-terminal domain DN407_24835 PF00108 Thiolase, N-terminal domain DN407_24840 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN407_24840 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN407_24840 PF00378 Enoyl-CoA hydratase/isomerase DN407_24845 PF14115 YuzL-like protein DN407_24850 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_24850 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_24855 PF01619 Proline dehydrogenase DN407_24860 PF10835 Protein of unknown function (DUF2573) DN407_24865 PF01910 Thiamine-binding protein DN407_24870 PF00672 HAMP domain DN407_24870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_24870 PF02743 Cache domain DN407_24885 PF07690 Major Facilitator Superfamily DN407_24890 PF13520 Amino acid permease DN407_24900 PF02096 60Kd inner membrane protein DN407_24910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_24910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_24950 PF09335 SNARE associated Golgi protein DN407_24960 PF17969 L,D-transpeptidase C-terminal domain DN407_24960 PF03734 L,D-transpeptidase catalytic domain DN407_24965 PF00486 Transcriptional regulatory protein, C terminal DN407_24965 PF00072 Response regulator receiver domain DN407_24970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_24970 PF00512 His Kinase A (phospho-acceptor) domain DN407_24970 PF00989 PAS fold DN407_24970 PF16736 Single Cache-like DN407_24985 PF09334 tRNA synthetases class I (M) DN407_24985 PF08264 Anticodon-binding domain of tRNA DN407_24995 PF02743 Cache domain DN407_24995 PF00672 HAMP domain DN407_24995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_25000 PF02743 Cache domain DN407_25000 PF00672 HAMP domain DN407_25000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_25005 PF01883 Iron-sulfur cluster assembly protein DN407_25010 PF07504 Fungalysin/Thermolysin Propeptide Motif DN407_25010 PF03413 Peptidase propeptide and YPEB domain DN407_25010 PF01447 Thermolysin metallopeptidase, catalytic domain DN407_25010 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN407_25015 PF17954 Quercetinase C-terminal cupin domain DN407_25015 PF02678 Pirin DN407_25020 PF01047 MarR family DN407_25030 PF09335 SNARE associated Golgi protein DN407_25035 PF00999 Sodium/hydrogen exchanger family DN407_25040 PF02080 TrkA-C domain DN407_25045 PF01235 Sodium:alanine symporter family DN407_25050 PF00210 Ferritin-like domain DN407_25065 PF03641 Possible lysine decarboxylase DN407_25075 PF00210 Ferritin-like domain DN407_25080 PF04235 Protein of unknown function (DUF418) DN407_25085 PF07662 Na+ dependent nucleoside transporter C-terminus DN407_25085 PF01773 Na+ dependent nucleoside transporter N-terminus DN407_25090 PF07662 Na+ dependent nucleoside transporter C-terminus DN407_25090 PF01773 Na+ dependent nucleoside transporter N-terminus DN407_25095 PF01235 Sodium:alanine symporter family DN407_25100 PF01235 Sodium:alanine symporter family DN407_25105 PF13460 NAD(P)H-binding DN407_25120 PF00248 Aldo/keto reductase family DN407_25125 PF07690 Major Facilitator Superfamily DN407_25130 PF01638 HxlR-like helix-turn-helix DN407_25135 PF07849 Protein of unknown function (DUF1641) DN407_25140 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_25145 PF01479 S4 domain DN407_25145 PF00579 tRNA synthetases class I (W and Y) DN407_25150 PF01565 FAD binding domain DN407_25150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN407_25160 PF17202 Single cache domain 3 DN407_25160 PF00672 HAMP domain DN407_25160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_25170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN407_25175 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN407_25190 PF07690 Major Facilitator Superfamily DN407_25195 PF12848 ABC transporter DN407_25195 PF00005 ABC transporter DN407_25200 PF13302 Acetyltransferase (GNAT) domain DN407_25205 PF06146 Phosphate-starvation-inducible E DN407_25220 PF01289 Thiol-activated cytolysin DN407_25220 PF17440 Thiol-activated cytolysin beta sandwich domain DN407_25225 PF00005 ABC transporter DN407_25230 PF01032 FecCD transport family DN407_25235 PF01032 FecCD transport family DN407_25245 PF00072 Response regulator receiver domain DN407_25245 PF00486 Transcriptional regulatory protein, C terminal DN407_25255 PF01668 SmpB protein DN407_25265 PF17876 Cold shock domain DN407_25265 PF00773 RNB domain DN407_25265 PF00575 S1 RNA binding domain DN407_25265 PF08206 Ribonuclease B OB domain DN407_25270 PF12146 Serine aminopeptidase, S33 DN407_25275 PF03840 Preprotein translocase SecG subunit DN407_25280 PF04172 LrgB-like family DN407_25285 PF03788 LrgA family DN407_25290 PF01156 Inosine-uridine preferring nucleoside hydrolase DN407_25295 PF03952 Enolase, N-terminal domain DN407_25295 PF00113 Enolase, C-terminal TIM barrel domain DN407_25300 PF01676 Metalloenzyme superfamily DN407_25300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN407_25305 PF00121 Triosephosphate isomerase DN407_25310 PF00162 Phosphoglycerate kinase DN407_25315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN407_25315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN407_25320 PF04198 Putative sugar-binding domain DN407_25330 PF04552 Sigma-54, DNA binding domain DN407_25330 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN407_25330 PF04963 Sigma-54 factor, core binding domain DN407_25375 PF02899 Phage integrase, N-terminal SAM-like domain DN407_25375 PF00589 Phage integrase family DN407_25395 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN407_25400 PF07451 Stage V sporulation protein AD (SpoVAD) DN407_25405 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN407_25415 PF04239 Protein of unknown function (DUF421) DN407_25420 PF00574 Clp protease DN407_25430 PF00381 PTS HPr component phosphorylation site DN407_25435 PF10298 WhiA N-terminal LAGLIDADG-like domain DN407_25435 PF02650 WhiA C-terminal HTH domain DN407_25435 PF14527 WhiA LAGLIDADG-like domain DN407_25440 PF01933 Uncharacterised protein family UPF0052 DN407_25445 PF03668 P-loop ATPase protein family DN407_25450 PF00293 NUDIX domain DN407_25460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN407_25470 PF14602 Hexapeptide repeat of succinyl-transferase DN407_25475 PF13419 Haloacid dehalogenase-like hydrolase DN407_25480 PF01790 Prolipoprotein diacylglyceryl transferase DN407_25485 PF07475 HPr Serine kinase C-terminal domain DN407_25485 PF02603 HPr Serine kinase N terminus DN407_25490 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DN407_25500 PF00005 ABC transporter DN407_25500 PF17760 UvrA interaction domain DN407_25500 PF17755 UvrA DNA-binding domain DN407_25505 PF02151 UvrB/uvrC motif DN407_25505 PF17757 UvrB interaction domain DN407_25505 PF00271 Helicase conserved C-terminal domain DN407_25505 PF04851 Type III restriction enzyme, res subunit DN407_25505 PF12344 Ultra-violet resistance protein B DN407_25520 PF07739 TipAS antibiotic-recognition domain DN407_25520 PF13411 MerR HTH family regulatory protein DN407_25535 PF03601 Conserved hypothetical protein 698 DN407_25540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_25540 PF03466 LysR substrate binding domain DN407_25545 PF09278 MerR, DNA binding DN407_25545 PF00376 MerR family regulatory protein DN407_25550 PF03358 NADPH-dependent FMN reductase DN407_25560 PF01906 Putative heavy-metal-binding DN407_25565 PF00664 ABC transporter transmembrane region DN407_25565 PF00005 ABC transporter DN407_25570 PF17820 PDZ domain DN407_25575 PF01471 Putative peptidoglycan binding domain DN407_25575 PF17820 PDZ domain DN407_25575 PF03572 Peptidase family S41 DN407_25580 PF18075 FtsX extracellular domain DN407_25580 PF02687 FtsX-like permease family DN407_25585 PF00005 ABC transporter DN407_25595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN407_25605 PF07516 SecA Wing and Scaffold domain DN407_25605 PF07517 SecA DEAD-like domain DN407_25605 PF01043 SecA preprotein cross-linking domain DN407_25605 PF02810 SEC-C motif DN407_25615 PF00005 ABC transporter DN407_25645 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DN407_25645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN407_25650 PF00313 'Cold-shock' DNA-binding domain DN407_25660 PF00271 Helicase conserved C-terminal domain DN407_25660 PF04851 Type III restriction enzyme, res subunit DN407_25665 PF01476 LysM domain DN407_25665 PF00877 NlpC/P60 family DN407_25670 PF01638 HxlR-like helix-turn-helix DN407_25675 PF02645 Uncharacterised protein, DegV family COG1307 DN407_25680 PF01205 Uncharacterized protein family UPF0029 DN407_25680 PF09186 Domain of unknown function (DUF1949) DN407_25685 PF03816 Cell envelope-related transcriptional attenuator domain DN407_25690 PF02350 UDP-N-acetylglucosamine 2-epimerase DN407_25695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN407_25695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN407_25695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN407_25700 PF00953 Glycosyl transferase family 4 DN407_25710 PF03610 PTS system fructose IIA component DN407_25710 PF00158 Sigma-54 interaction domain DN407_25710 PF00874 PRD domain DN407_25720 PF02417 Chromate transporter DN407_25725 PF04794 YdjC-like protein DN407_25730 PF11975 Family 4 glycosyl hydrolase C-terminal domain DN407_25730 PF02056 Family 4 glycosyl hydrolase DN407_25735 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN407_25740 PF02378 Phosphotransferase system, EIIC DN407_25745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN407_25750 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN407_25755 PF02378 Phosphotransferase system, EIIC DN407_25760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN407_25765 PF00375 Sodium:dicarboxylate symporter family DN407_25785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN407_25785 PF03466 LysR substrate binding domain DN407_25795 PF01654 Cytochrome bd terminal oxidase subunit I DN407_25800 PF02322 Cytochrome bd terminal oxidase subunit II DN407_25805 PF02040 Arsenical pump membrane protein DN407_25810 PF13667 ThiC-associated domain DN407_25810 PF01964 Radical SAM ThiC family DN407_25815 PF02652 L-lactate permease DN407_25825 PF09988 Uncharacterized metal-binding protein (DUF2227) DN407_25840 PF00884 Sulfatase DN407_25845 PF01063 Amino-transferase class IV DN407_25855 PF01476 LysM domain DN407_25855 PF00877 NlpC/P60 family DN407_25860 PF01773 Na+ dependent nucleoside transporter N-terminus DN407_25860 PF07662 Na+ dependent nucleoside transporter C-terminus DN407_25875 PF02028 BCCT, betaine/carnitine/choline family transporter DN407_25885 PF06725 3D domain DN407_25885 PF01476 LysM domain DN407_25910 PF04434 SWIM zinc finger DN407_25915 PF00176 SNF2 family N-terminal domain DN407_25915 PF12419 SNF2 Helicase protein DN407_25915 PF00271 Helicase conserved C-terminal domain DN407_25945 PF04545 Sigma-70, region 4 DN407_25945 PF04542 Sigma-70 region 2 DN407_25950 PF04893 Yip1 domain DN407_25955 PF02687 FtsX-like permease family DN407_25955 PF12704 MacB-like periplasmic core domain DN407_25960 PF00005 ABC transporter DN407_25970 PF07690 Major Facilitator Superfamily DN407_25985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_25985 PF00989 PAS fold DN407_25985 PF16736 Single Cache-like DN407_25985 PF00512 His Kinase A (phospho-acceptor) domain DN407_25990 PF00072 Response regulator receiver domain DN407_25990 PF00486 Transcriptional regulatory protein, C terminal DN407_25995 PF16363 GDP-mannose 4,6 dehydratase DN407_26000 PF16363 GDP-mannose 4,6 dehydratase DN407_26010 PF03816 Cell envelope-related transcriptional attenuator domain DN407_26020 PF13439 Glycosyltransferase Family 4 DN407_26020 PF00534 Glycosyl transferases group 1 DN407_26045 PF13439 Glycosyltransferase Family 4 DN407_26045 PF00534 Glycosyl transferases group 1 DN407_26055 PF03033 Glycosyltransferase family 28 N-terminal domain DN407_26055 PF04101 Glycosyltransferase family 28 C-terminal domain DN407_26060 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN407_26060 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN407_26060 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN407_26065 PF02397 Bacterial sugar transferase DN407_26070 PF00483 Nucleotidyl transferase DN407_26080 PF13614 AAA domain DN407_26085 PF13807 G-rich domain on putative tyrosine kinase DN407_26085 PF02706 Chain length determinant protein DN407_26090 PF13614 AAA domain DN407_26095 PF07977 FabA-like domain DN407_26105 PF12116 Stage III sporulation protein D DN407_26115 PF01551 Peptidase family M23 DN407_26125 PF00005 ABC transporter DN407_26130 PF04397 LytTr DNA-binding domain DN407_26130 PF00072 Response regulator receiver domain DN407_26135 PF08486 Stage II sporulation protein DN407_26140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN407_26150 PF06612 Protein of unknown function (DUF1146) DN407_26155 PF00361 Proton-conducting membrane transporter DN407_26160 PF00361 Proton-conducting membrane transporter DN407_26165 PF00361 Proton-conducting membrane transporter DN407_26165 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DN407_26165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN407_26170 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DN407_26175 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DN407_26185 PF00146 NADH dehydrogenase DN407_26190 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DN407_26195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DN407_26200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DN407_26205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DN407_26210 PF03707 Bacterial signalling protein N terminal repeat DN407_26210 PF00990 Diguanylate cyclase, GGDEF domain DN407_26210 PF00563 EAL domain DN407_26225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DN407_26225 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DN407_26230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN407_26230 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN407_26235 PF00231 ATP synthase DN407_26240 PF00306 ATP synthase alpha/beta chain, C terminal domain DN407_26240 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN407_26240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN407_26245 PF00213 ATP synthase delta (OSCP) subunit DN407_26250 PF00430 ATP synthase B/B' CF(0) DN407_26255 PF00137 ATP synthase subunit C DN407_26260 PF00119 ATP synthase A chain DN407_26265 PF03899 ATP synthase I chain DN407_26285 PF00464 Serine hydroxymethyltransferase DN407_26290 PF04260 Protein of unknown function (DUF436) DN407_26295 PF02502 Ribose/Galactose Isomerase DN407_26300 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN407_26305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN407_26310 PF07681 DoxX DN407_26315 PF01613 Flavin reductase like domain DN407_26325 PF02659 Putative manganese efflux pump DN407_26330 PF01300 Telomere recombination DN407_26330 PF03481 Putative GTP-binding controlling metal-binding DN407_26340 PF09551 Stage II sporulation protein R (spore_II_R) DN407_26345 PF17827 PrmC N-terminal domain DN407_26345 PF13847 Methyltransferase domain DN407_26350 PF03462 PCRF domain DN407_26350 PF00472 RF-1 domain DN407_26355 PF00265 Thymidine kinase DN407_26360 PF01197 Ribosomal protein L31 DN407_26365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN407_26365 PF07498 Rho termination factor, N-terminal domain DN407_26365 PF07497 Rho termination factor, RNA-binding domain DN407_26370 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN407_26375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN407_26380 PF01116 Fructose-bisphosphate aldolase class-II DN407_26385 PF00072 Response regulator receiver domain DN407_26390 PF10740 Domain of unknown function (DUF2529) DN407_26395 PF06418 CTP synthase N-terminus DN407_26395 PF00117 Glutamine amidotransferase class-I DN407_26400 PF05066 HB1, ASXL, restriction endonuclease HTH domain DN407_26410 PF02770 Acyl-CoA dehydrogenase, middle domain DN407_26410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN407_26410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN407_26415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN407_26415 PF02770 Acyl-CoA dehydrogenase, middle domain DN407_26415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN407_26420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN407_26420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN407_26425 PF02803 Thiolase, C-terminal domain DN407_26425 PF00108 Thiolase, N-terminal domain DN407_26430 PF02754 Cysteine-rich domain DN407_26430 PF13183 4Fe-4S dicluster domain DN407_26435 PF13091 PLD-like domain DN407_26440 PF03851 UV-endonuclease UvdE DN407_26445 PF00563 EAL domain DN407_26445 PF00990 Diguanylate cyclase, GGDEF domain DN407_26445 PF03707 Bacterial signalling protein N terminal repeat DN407_26460 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN407_26460 PF01447 Thermolysin metallopeptidase, catalytic domain DN407_26460 PF07504 Fungalysin/Thermolysin Propeptide Motif DN407_26460 PF03413 Peptidase propeptide and YPEB domain DN407_26465 PF00196 Bacterial regulatory proteins, luxR family DN407_26465 PF00072 Response regulator receiver domain DN407_26470 PF07730 Histidine kinase DN407_26470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_26480 PF00005 ABC transporter DN407_26485 PF00557 Metallopeptidase family M24 DN407_26495 PF04389 Peptidase family M28 DN407_26495 PF02225 PA domain DN407_26515 PF04542 Sigma-70 region 2 DN407_26515 PF08281 Sigma-70, region 4 DN407_26520 PF00750 tRNA synthetases class I (R) DN407_26520 PF05746 DALR anticodon binding domain DN407_26520 PF03485 Arginyl tRNA synthetase N terminal domain DN407_26525 PF09148 Domain of unknown function (DUF1934) DN407_26530 PF02016 LD-carboxypeptidase N-terminal domain DN407_26530 PF17676 LD-carboxypeptidase C-terminal domain DN407_26545 PF00491 Arginase family DN407_26550 PF17284 Spermidine synthase tetramerisation domain DN407_26555 PF07690 Major Facilitator Superfamily DN407_26560 PF13411 MerR HTH family regulatory protein DN407_26565 PF03009 Glycerophosphoryl diester phosphodiesterase family DN407_26570 PF00912 Transglycosylase DN407_26570 PF00905 Penicillin binding protein transpeptidase domain DN407_26575 PF08741 YwhD family DN407_26580 PF02163 Peptidase family M50 DN407_26585 PF01361 Tautomerase enzyme DN407_26590 PF01966 HD domain DN407_26595 PF01497 Periplasmic binding protein DN407_26600 PF00005 ABC transporter DN407_26605 PF01032 FecCD transport family DN407_26610 PF01032 FecCD transport family DN407_26615 PF07293 Protein of unknown function (DUF1450) DN407_26625 PF03099 Biotin/lipoate A/B protein ligase family DN407_26630 PF01515 Phosphate acetyl/butaryl transferase DN407_26640 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_26640 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_26645 PF07486 Cell Wall Hydrolase DN407_26650 PF09671 Spore coat protein (Spore_GerQ) DN407_26655 PF04241 Protein of unknown function (DUF423) DN407_26665 PF07885 Ion channel DN407_26665 PF02254 TrkA-N domain DN407_26670 PF00860 Permease family DN407_26680 PF12823 Domain of unknown function (DUF3817) DN407_26685 PF03167 Uracil DNA glycosylase superfamily DN407_26690 PF12679 ABC-2 family transporter protein DN407_26695 PF00005 ABC transporter DN407_26700 PF13472 GDSL-like Lipase/Acylhydrolase family DN407_26705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN407_26705 PF00356 Bacterial regulatory proteins, lacI family DN407_26715 PF00742 Homoserine dehydrogenase DN407_26715 PF03447 Homoserine dehydrogenase, NAD binding domain DN407_26715 PF01842 ACT domain DN407_26720 PF04204 Homoserine O-succinyltransferase DN407_26725 PF01053 Cys/Met metabolism PLP-dependent enzyme DN407_26735 PF13419 Haloacid dehalogenase-like hydrolase DN407_26740 PF00027 Cyclic nucleotide-binding domain DN407_26745 PF02525 Flavodoxin-like fold DN407_26750 PF00196 Bacterial regulatory proteins, luxR family DN407_26750 PF00072 Response regulator receiver domain DN407_26755 PF07730 Histidine kinase DN407_26755 PF13185 GAF domain DN407_26760 PF08543 Phosphomethylpyrimidine kinase DN407_26765 PF07694 5TMR of 5TMR-LYT DN407_26765 PF00990 Diguanylate cyclase, GGDEF domain DN407_26770 PF04328 Selenoprotein, putative DN407_26775 PF02554 Carbon starvation protein CstA DN407_26775 PF13722 5TM C-terminal transporter carbon starvation CstA DN407_26780 PF00072 Response regulator receiver domain DN407_26780 PF04397 LytTr DNA-binding domain DN407_26785 PF07690 Major Facilitator Superfamily DN407_26795 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN407_26800 PF13439 Glycosyltransferase Family 4 DN407_26800 PF00534 Glycosyl transferases group 1 DN407_26810 PF03458 UPF0126 domain DN407_26815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_26825 PF03061 Thioesterase superfamily DN407_26830 PF00535 Glycosyl transferase family 2 DN407_26845 PF00535 Glycosyl transferase family 2 DN407_26855 PF09586 Bacterial membrane protein YfhO DN407_26860 PF00535 Glycosyl transferase family 2 DN407_26865 PF00005 ABC transporter DN407_26865 PF12848 ABC transporter DN407_26870 PF00440 Bacterial regulatory proteins, tetR family DN407_26875 PF00873 AcrB/AcrD/AcrF family DN407_26880 PF01625 Peptide methionine sulfoxide reductase DN407_26880 PF01641 SelR domain DN407_26885 PF01594 AI-2E family transporter DN407_26890 PF04172 LrgB-like family DN407_26895 PF03788 LrgA family DN407_26900 PF00072 Response regulator receiver domain DN407_26900 PF04397 LytTr DNA-binding domain DN407_26905 PF06580 Histidine kinase DN407_26905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_26905 PF07694 5TMR of 5TMR-LYT DN407_26905 PF13492 GAF domain DN407_26910 PF07690 Major Facilitator Superfamily DN407_26915 PF02028 BCCT, betaine/carnitine/choline family transporter DN407_26920 PF02898 Nitric oxide synthase, oxygenase domain DN407_26930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN407_26930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN407_26940 PF02293 AmiS/UreI family transporter DN407_26950 PF16363 GDP-mannose 4,6 dehydratase DN407_26955 PF03006 Haemolysin-III related DN407_26965 PF03880 DbpA RNA binding domain DN407_26965 PF00270 DEAD/DEAH box helicase DN407_26965 PF00271 Helicase conserved C-terminal domain DN407_26970 PF00478 IMP dehydrogenase / GMP reductase domain DN407_26990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_26990 PF00512 His Kinase A (phospho-acceptor) domain DN407_26990 PF13188 PAS domain DN407_26990 PF00989 PAS fold DN407_26990 PF13426 PAS domain DN407_26995 PF02590 Predicted SPOUT methyltransferase DN407_27005 PF13180 PDZ domain DN407_27010 PF00753 Metallo-beta-lactamase superfamily DN407_27015 PF09648 YycH protein DN407_27025 PF13426 PAS domain DN407_27025 PF00512 His Kinase A (phospho-acceptor) domain DN407_27025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_27025 PF00672 HAMP domain DN407_27030 PF00486 Transcriptional regulatory protein, C terminal DN407_27030 PF00072 Response regulator receiver domain DN407_27055 PF00709 Adenylosuccinate synthetase DN407_27060 PF00772 DnaB-like helicase N terminal domain DN407_27060 PF03796 DnaB-like helicase C terminal domain DN407_27065 PF03948 Ribosomal protein L9, C-terminal domain DN407_27065 PF01281 Ribosomal protein L9, N-terminal domain DN407_27070 PF01368 DHH family DN407_27070 PF02272 DHHA1 domain DN407_27075 PF09991 Predicted membrane protein (DUF2232) DN407_27080 PF01084 Ribosomal protein S18 DN407_27085 PF00436 Single-strand binding protein family DN407_27090 PF01250 Ribosomal protein S6 DN407_27095 PF01926 50S ribosome-binding GTPase DN407_27095 PF06071 Protein of unknown function (DUF933) DN407_27100 PF06107 Bacterial protein of unknown function (DUF951) DN407_27105 PF00924 Mechanosensitive ion channel DN407_27110 PF06866 Protein of unknown function (DUF1256) DN407_27115 PF02195 ParB-like nuclease domain DN407_27115 PF17762 HTH domain found in ParB protein DN407_27120 PF13614 AAA domain DN407_27125 PF17762 HTH domain found in ParB protein DN407_27125 PF02195 ParB-like nuclease domain DN407_27130 PF02527 rRNA small subunit methyltransferase G DN407_27135 PF13932 GidA associated domain DN407_27135 PF01134 Glucose inhibited division protein A DN407_27140 PF01926 50S ribosome-binding GTPase DN407_27140 PF12631 MnmE helical domain DN407_27140 PF10396 GTP-binding protein TrmE N-terminus DN407_27145 PF01424 R3H domain DN407_27145 PF14804 Jag N-terminus DN407_27150 PF02096 60Kd inner membrane protein DN407_27155 PF00825 Ribonuclease P DN407_27160 PF00468 Ribosomal protein L34 DN407_27220 PF01520 N-acetylmuramoyl-L-alanine amidase DN407_27220 PF00395 S-layer homology domain DN407_27225 PF01522 Polysaccharide deacetylase DN407_27240 PF00672 HAMP domain DN407_27240 PF18698 Histidine kinase sensor domain DN407_27240 PF00512 His Kinase A (phospho-acceptor) domain DN407_27240 PF00989 PAS fold DN407_27240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_27245 PF00486 Transcriptional regulatory protein, C terminal DN407_27245 PF00072 Response regulator receiver domain DN407_27255 PF00672 HAMP domain DN407_27255 PF01966 HD domain DN407_27330 PF17854 FtsK alpha domain DN407_27330 PF09397 Ftsk gamma domain DN407_27330 PF01580 FtsK/SpoIIIE family DN407_27330 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DN407_27635 PF00392 Bacterial regulatory proteins, gntR family DN407_27640 PF00005 ABC transporter DN407_27655 PF00392 Bacterial regulatory proteins, gntR family DN407_27655 PF07729 FCD domain DN407_27660 PF13536 Putative multidrug resistance efflux transporter DN407_27680 PF00313 'Cold-shock' DNA-binding domain DN407_27700 PF02559 CarD-like/TRCF domain DN407_27725 PF01494 FAD binding domain DN407_27740 PF00300 Histidine phosphatase superfamily (branch 1) DN407_27750 PF01047 MarR family DN407_27755 PF00857 Isochorismatase family DN407_27760 PF07690 Major Facilitator Superfamily DN407_27770 PF13411 MerR HTH family regulatory protein DN407_27780 PF04235 Protein of unknown function (DUF418) DN407_27830 PF01494 FAD binding domain DN407_27850 PF13302 Acetyltransferase (GNAT) domain DN407_27855 PF00067 Cytochrome P450 DN407_27860 PF01609 Transposase DDE domain DN407_27870 PF01609 Transposase DDE domain DN407_27885 PF01510 N-acetylmuramoyl-L-alanine amidase DN407_27885 PF01471 Putative peptidoglycan binding domain DN407_27885 PF01476 LysM domain DN407_27895 PF01569 PAP2 superfamily DN407_27925 PF00892 EamA-like transporter family DN407_27935 PF00392 Bacterial regulatory proteins, gntR family DN407_27935 PF07729 FCD domain DN407_27940 PF00892 EamA-like transporter family DN407_27955 PF01804 Penicillin amidase DN407_27960 PF00501 AMP-binding enzyme DN407_27960 PF13193 AMP-binding enzyme C-terminal domain DN407_27960 PF00668 Condensation domain DN407_27960 PF00550 Phosphopantetheine attachment site DN407_27960 PF00501 AMP-binding enzyme DN407_27960 PF13193 AMP-binding enzyme C-terminal domain DN407_27960 PF00668 Condensation domain DN407_27960 PF00550 Phosphopantetheine attachment site DN407_27965 PF00550 Phosphopantetheine attachment site DN407_27965 PF00501 AMP-binding enzyme DN407_27965 PF13193 AMP-binding enzyme C-terminal domain DN407_27965 PF00668 Condensation domain DN407_27970 PF13193 AMP-binding enzyme C-terminal domain DN407_27970 PF00668 Condensation domain DN407_27970 PF00550 Phosphopantetheine attachment site DN407_27970 PF00501 AMP-binding enzyme DN407_27975 PF00975 Thioesterase domain DN407_27980 PF01648 4'-phosphopantetheinyl transferase superfamily DN407_27990 PF00291 Pyridoxal-phosphate dependent enzyme DN407_27995 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN407_28005 PF00144 Beta-lactamase DN407_28010 PF00144 Beta-lactamase DN407_28015 PF00854 POT family DN407_28025 PF00155 Aminotransferase class I and II DN407_28025 PF00392 Bacterial regulatory proteins, gntR family DN407_28030 PF00892 EamA-like transporter family DN407_28080 PF00005 ABC transporter DN407_28085 PF02687 FtsX-like permease family DN407_28090 PF18277 AbrB C-terminal domain DN407_28090 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN407_28100 PF17209 Hfq protein DN407_28115 PF02743 Cache domain DN407_28115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_28115 PF00672 HAMP domain DN407_28125 PF00144 Beta-lactamase DN407_28135 PF07690 Major Facilitator Superfamily DN407_28140 PF00440 Bacterial regulatory proteins, tetR family DN407_28140 PF16859 Tetracyclin repressor-like, C-terminal domain DN407_28155 PF12323 Helix-turn-helix domain DN407_28155 PF01385 Probable transposase DN407_28155 PF07282 Putative transposase DNA-binding domain DN407_28180 PF17853 GGDEF-like domain DN407_28180 PF12833 Helix-turn-helix domain DN407_28195 PF12833 Helix-turn-helix domain DN407_28230 PF02311 AraC-like ligand binding domain DN407_28230 PF12833 Helix-turn-helix domain DN407_28240 PF01022 Bacterial regulatory protein, arsR family DN407_28265 PF05163 DinB family DN407_28285 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_28290 PF10676 Spore germination protein gerPA/gerPF DN407_28300 PF01554 MatE DN407_28305 PF00355 Rieske [2Fe-2S] domain DN407_28305 PF01266 FAD dependent oxidoreductase DN407_28315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN407_28315 PF00205 Thiamine pyrophosphate enzyme, central domain DN407_28315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN407_28350 PF01040 UbiA prenyltransferase family DN407_28375 PF13520 Amino acid permease DN407_28390 PF00109 Beta-ketoacyl synthase, N-terminal domain DN407_28390 PF02801 Beta-ketoacyl synthase, C-terminal domain DN407_28405 PF00535 Glycosyl transferase family 2 DN407_28405 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DN407_28435 PF18801 response regulator aspartate phosphatase H, N terminal DN407_28460 PF03009 Glycerophosphoryl diester phosphodiesterase family DN407_28465 PF00005 ABC transporter DN407_28485 PF12323 Helix-turn-helix domain DN407_28485 PF07282 Putative transposase DNA-binding domain DN407_28485 PF01385 Probable transposase DN407_28505 PF03965 Penicillinase repressor DN407_28535 PF04235 Protein of unknown function (DUF418) DN407_28535 PF07786 Protein of unknown function (DUF1624) DN407_28540 PF00005 ABC transporter DN407_28550 PF00440 Bacterial regulatory proteins, tetR family DN407_28575 PF00589 Phage integrase family DN407_28575 PF13495 Phage integrase, N-terminal SAM-like domain DN407_28590 PF12146 Serine aminopeptidase, S33 DN407_28590 PF13026 Protein of unknown function (DUF3887) DN407_28620 PF07681 DoxX DN407_28625 PF00501 AMP-binding enzyme DN407_28625 PF13193 AMP-binding enzyme C-terminal domain DN407_28645 PF01833 IPT/TIG domain DN407_28645 PF00128 Alpha amylase, catalytic domain DN407_28645 PF00686 Starch binding domain DN407_28650 PF07690 Major Facilitator Superfamily DN407_28675 PF00005 ABC transporter DN407_28685 PF00486 Transcriptional regulatory protein, C terminal DN407_28685 PF00072 Response regulator receiver domain DN407_28690 PF00512 His Kinase A (phospho-acceptor) domain DN407_28690 PF00672 HAMP domain DN407_28690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_28720 PF01370 NAD dependent epimerase/dehydratase family DN407_28720 PF00551 Formyl transferase DN407_28720 PF02911 Formyl transferase, C-terminal domain DN407_28725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN407_28725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN407_28725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN407_28735 PF00535 Glycosyl transferase family 2 DN407_28740 PF00535 Glycosyl transferase family 2 DN407_28745 PF00535 Glycosyl transferase family 2 DN407_28775 PF04259 Small, acid-soluble spore protein, gamma-type DN407_28820 PF07486 Cell Wall Hydrolase DN407_28845 PF01051 Initiator Replication protein DN407_28855 PF00483 Nucleotidyl transferase DN407_28860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN407_28860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN407_28860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN407_28865 PF01370 NAD dependent epimerase/dehydratase family DN407_28870 PF00534 Glycosyl transferases group 1 DN407_28870 PF13439 Glycosyltransferase Family 4 DN407_28895 PF13439 Glycosyltransferase Family 4 DN407_28895 PF00534 Glycosyl transferases group 1 DN407_28900 PF01636 Phosphotransferase enzyme family DN407_29055 PF01022 Bacterial regulatory protein, arsR family DN407_29060 PF01022 Bacterial regulatory protein, arsR family DN407_29065 PF02600 Disulfide bond formation protein DsbB DN407_29080 PF01131 DNA topoisomerase DN407_29080 PF01751 Toprim domain DN407_29080 PF13342 C-terminal repeat of topoisomerase DN407_29085 PF13342 C-terminal repeat of topoisomerase DN407_29085 PF01751 Toprim domain DN407_29085 PF01131 DNA topoisomerase DN407_29095 PF07690 Major Facilitator Superfamily DN407_29100 PF01979 Amidohydrolase family DN407_29105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN407_29105 PF02770 Acyl-CoA dehydrogenase, middle domain DN407_29105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN407_29110 PF04303 PrpF protein DN407_29115 PF00733 Asparagine synthase DN407_29115 PF13537 Glutamine amidotransferase domain DN407_29145 PF08378 Nuclease-related domain DN407_29195 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN407_29195 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN407_29205 PF00698 Acyl transferase domain DN407_29205 PF00550 Phosphopantetheine attachment site DN407_29205 PF02801 Beta-ketoacyl synthase, C-terminal domain DN407_29205 PF00668 Condensation domain DN407_29205 PF00109 Beta-ketoacyl synthase, N-terminal domain DN407_29205 PF16197 Ketoacyl-synthetase C-terminal extension DN407_29210 PF00550 Phosphopantetheine attachment site DN407_29210 PF00668 Condensation domain DN407_29210 PF13193 AMP-binding enzyme C-terminal domain DN407_29210 PF00501 AMP-binding enzyme DN407_29215 PF00975 Thioesterase domain DN407_29240 PF02142 MGS-like domain DN407_29240 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN407_29240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN407_29250 PF01047 MarR family DN407_29260 PF00291 Pyridoxal-phosphate dependent enzyme DN407_29275 PF00291 Pyridoxal-phosphate dependent enzyme DN407_29305 PF00589 Phage integrase family DN407_29350 PF00005 ABC transporter DN407_29395 PF18801 response regulator aspartate phosphatase H, N terminal DN407_29415 PF00082 Subtilase family DN407_29445 PF00132 Bacterial transferase hexapeptide (six repeats) DN407_29450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN407_29455 PF00535 Glycosyl transferase family 2 DN407_29460 PF00378 Enoyl-CoA hydratase/isomerase DN407_29475 PF01381 Helix-turn-helix DN407_29500 PF14436 Bacterial EndoU nuclease DN407_29500 PF04740 LXG domain of WXG superfamily DN407_29530 PF01381 Helix-turn-helix DN407_29540 PF03793 PASTA domain DN407_29540 PF00069 Protein kinase domain DN407_29590 PF00589 Phage integrase family DN407_29590 PF14659 Phage integrase, N-terminal SAM-like domain DN407_29620 PF18801 response regulator aspartate phosphatase H, N terminal DN407_29645 PF17874 MalT-like TPR region DN407_29645 PF18801 response regulator aspartate phosphatase H, N terminal DN407_29680 PF08240 Alcohol dehydrogenase GroES-like domain DN407_29680 PF00107 Zinc-binding dehydrogenase DN407_29705 PF13520 Amino acid permease DN407_29715 PF03323 Bacillus/Clostridium GerA spore germination protein DN407_29720 PF03845 Spore germination protein DN407_29740 PF00216 Bacterial DNA-binding protein DN407_29745 PF13302 Acetyltransferase (GNAT) domain DN407_29750 PF12706 Beta-lactamase superfamily domain DN407_29755 PF01037 Lrp/AsnC ligand binding domain DN407_29815 PF00733 Asparagine synthase DN407_29815 PF13537 Glutamine amidotransferase domain DN407_29820 PF17932 Tetracyclin repressor-like, C-terminal domain DN407_29820 PF00440 Bacterial regulatory proteins, tetR family DN407_29830 PF00005 ABC transporter DN407_29860 PF01522 Polysaccharide deacetylase DN407_29885 PF13847 Methyltransferase domain DN407_29885 PF00069 Protein kinase domain DN407_29975 PF07282 Putative transposase DNA-binding domain DN407_29975 PF01385 Probable transposase DN407_29975 PF12323 Helix-turn-helix domain DN407_30005 PF01510 N-acetylmuramoyl-L-alanine amidase DN407_30020 PF01476 LysM domain DN407_30020 PF01471 Putative peptidoglycan binding domain DN407_30020 PF01510 N-acetylmuramoyl-L-alanine amidase DN407_30025 PF01551 Peptidase family M23 DN407_30025 PF04225 Opacity-associated protein A LysM-like domain DN407_30060 PF10042 Uncharacterized conserved protein (DUF2278) DN407_30075 PF03412 Peptidase C39 family DN407_30075 PF00664 ABC transporter transmembrane region DN407_30075 PF00005 ABC transporter DN407_30085 PF00535 Glycosyl transferase family 2 DN407_30120 PF06414 Zeta toxin DN407_30135 PF18801 response regulator aspartate phosphatase H, N terminal DN407_30155 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN407_30160 PF00672 HAMP domain DN407_30160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN407_30230 PF00144 Beta-lactamase DN407_30240 PF00665 Integrase core domain DN407_30240 PF13276 HTH-like domain DN407_30240 PF13333 Integrase core domain DN407_30250 PF07282 Putative transposase DNA-binding domain DN407_30250 PF01385 Probable transposase DN407_30250 PF12323 Helix-turn-helix domain DN407_30340 PF00005 ABC transporter DN407_30390 PF13700 Domain of unknown function (DUF4158) DN407_30390 PF01526 Tn3 transposase DDE domain DN407_30430 PF00005 ABC transporter DN407_30460 PF00005 ABC transporter DN407_30495 PF00579 tRNA synthetases class I (W and Y) DN407_30495 PF01479 S4 domain DN407_30505 PF13520 Amino acid permease DN407_30515 PF08543 Phosphomethylpyrimidine kinase DN407_30525 PF01371 Trp repressor protein DN407_30545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN407_30560 PF01790 Prolipoprotein diacylglyceryl transferase DN407_30600 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN407_30710 PF01098 Cell cycle protein DN407_30715 PF03448 MgtE intracellular N domain DN407_30715 PF01769 Divalent cation transporter DN407_30715 PF00571 CBS domain DN407_30745 PF01569 PAP2 superfamily DN407_30750 PF01098 Cell cycle protein DN407_30770 PF13180 PDZ domain DN407_30790 PF18413 Neuraminidase-like domain DN407_30790 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain DN407_30795 PF03534 Salmonella virulence plasmid 65kDa B protein DN407_30795 PF12255 Insecticide toxin TcdB middle/C-terminal region DN407_30795 PF12256 Insecticide toxin TcdB middle/N-terminal region DN407_30800 PF18807 Tripartite Tc toxins repeat DN407_30800 PF14431 YwqJ-like deaminase DN407_30815 PF00486 Transcriptional regulatory protein, C terminal DN407_30815 PF00072 Response regulator receiver domain DN407_30820 PF00512 His Kinase A (phospho-acceptor) domain DN407_30820 PF00989 PAS fold DN407_30820 PF16736 Single Cache-like DN407_30820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN407_30845 PF13520 Amino acid permease DN407_30860 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN407_30860 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN407_30870 PF13495 Phage integrase, N-terminal SAM-like domain DN407_30870 PF00589 Phage integrase family DN407_30885 PF01471 Putative peptidoglycan binding domain DN407_30885 PF01510 N-acetylmuramoyl-L-alanine amidase DN407_30885 PF01476 LysM domain DN407_30905 PF18801 response regulator aspartate phosphatase H, N terminal DN407_30985 PF13520 Amino acid permease DN407_30990 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN407_30990 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN407_30995 PF00291 Pyridoxal-phosphate dependent enzyme DN407_31000 PF13520 Amino acid permease DN407_31020 PF03497 Anthrax toxin LF subunit DN407_31020 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain DN407_31025 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain DN407_31025 PF07691 PA14 domain DN407_31025 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 DN407_31025 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 DN407_31050 PF05105 Bacteriophage holin family DN407_31060 PF01769 Divalent cation transporter DN407_31060 PF03448 MgtE intracellular N domain DN407_31060 PF00571 CBS domain DN407_31065 PF08280 M protein trans-acting positive regulator (MGA) HTH domain DN407_31065 PF05043 Mga helix-turn-helix domain DN407_31070 PF12323 Helix-turn-helix domain DN407_31070 PF07282 Putative transposase DNA-binding domain DN407_31070 PF01385 Probable transposase DN407_31075 PF01522 Polysaccharide deacetylase DN407_31080 PF06146 Phosphate-starvation-inducible E DN407_31090 PF01566 Natural resistance-associated macrophage protein DN407_31095 PF00486 Transcriptional regulatory protein, C terminal DN407_31095 PF00072 Response regulator receiver domain DN407_31100 PF12323 Helix-turn-helix domain DN407_31100 PF01385 Probable transposase DN407_31100 PF07282 Putative transposase DNA-binding domain DN407_31115 PF00665 Integrase core domain DN407_31115 PF09299 Mu transposase, C-terminal DN407_31135 PF00665 Integrase core domain DN407_31135 PF13333 Integrase core domain DN407_31135 PF13276 HTH-like domain DN407_31165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN407_31250 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN407_31250 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN407_31265 PF01297 Zinc-uptake complex component A periplasmic DN407_31270 PF00005 ABC transporter DN407_31275 PF00950 ABC 3 transport family DN407_31290 PF13333 Integrase core domain DN407_31290 PF00665 Integrase core domain DN407_31295 PF00665 Integrase core domain DN407_31295 PF13333 Integrase core domain DN407_31295 PF13276 HTH-like domain DN407_31305 PF01022 Bacterial regulatory protein, arsR family DN407_31310 PF01471 Putative peptidoglycan binding domain DN407_31310 PF01183 Glycosyl hydrolases family 25 DN407_31325 PF00768 D-alanyl-D-alanine carboxypeptidase DN407_31325 PF07943 Penicillin-binding protein 5, C-terminal domain DN407_31335 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN407_31335 PF18277 AbrB C-terminal domain DN407_31355 PF04012 PspA/IM30 family DN407_31415 PF01522 Polysaccharide deacetylase DN407_31430 PF12671 Putative amidase domain DN407_31570 PF02661 Fic/DOC family DN407_31570 PF13784 Fic/DOC family N-terminal