locus-tag	class	description
DN407_00010	COG0592	DNA-directed DNA polymerase activity
DN407_00015	COG2501	S4 domain
DN407_00025	COG0187	DNA topoisomerase II activity
DN407_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DN407_00065	COG0517	IMP dehydrogenase activity
DN407_00065	COG0516	GMP reductase activity
DN407_00070	COG1686	Belongs to the peptidase S11 family
DN407_00100	COG1428	Deoxynucleoside kinase
DN407_00105	COG1428	Deoxynucleoside kinase
DN407_00110	COG1335	isochorismatase
DN407_00120	COG0590	tRNA wobble adenosine to inosine editing
DN407_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DN407_00185	COG1982	Orn Lys Arg decarboxylase major
DN407_00195	COG0470	DNA polymerase III
DN407_00200	COG1774	PSP1 C-terminal conserved region
DN407_00210	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DN407_00220	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DN407_00225	COG2002	toxin-antitoxin pair type II binding
DN407_00235	COG0084	hydrolase, TatD family'
DN407_00255	COG4466	Protein conserved in bacteria
DN407_00270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DN407_00275	COG0251	oxidation-reduction process
DN407_00290	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DN407_00305	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DN407_00310	COG2002	toxin-antitoxin pair type II binding
DN407_00315	COG2244	polysaccharide biosynthetic process
DN407_00320	COG3956	TIGRFAM MazG family protein
DN407_00325	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DN407_00345	COG1098	S1 RNA binding domain
DN407_00360	COG2208	phosphoserine phosphatase activity
DN407_00375	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DN407_00390	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DN407_00395	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DN407_00400	COG0512	Glutamine amidotransferase of anthranilate synthase
DN407_00405	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_00410	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DN407_00415	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DN407_00420	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DN407_00425	COG1396	sequence-specific DNA binding
DN407_00430	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DN407_00520	COG3880	PFAM UvrB UvrC protein
DN407_00530	COG0542	response to heat
DN407_00535	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DN407_00545	COG4956	integral membrane protein (PIN domain superfamily)
DN407_00565	COG1045	serine acetyltransferase
DN407_00580	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DN407_00585	COG3688	RNA-binding protein containing a PIN domain
DN407_00595	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DN407_00600	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DN407_00605	COG0250	Participates in transcription elongation, termination and antitermination
DN407_00630	COG2813	Specifically methylates the guanine in position
DN407_00645	COG1358	cellular component organization or biogenesis
DN407_00755	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DN407_00780	COG0201	protein transport
DN407_00790	COG0024	Methionine aminopeptidase
DN407_00800	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DN407_00835	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DN407_00860	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_00865	COG0489	protein tyrosine kinase activity
DN407_00875	COG2194	sulfuric ester hydrolase activity
DN407_00880	COG0726	polysaccharide deacetylase
DN407_00960	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DN407_00965	COG4856	YbbR-like protein
DN407_01000	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_01005	COG2011	ABC-type metal ion transport system permease component
DN407_01010	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DN407_01015	COG1464	Belongs to the NlpA lipoprotein family
DN407_01020	COG0604	alcohol dehydrogenase
DN407_01030	COG0277	FAD linked oxidase domain protein
DN407_01035	COG2271	Major facilitator Superfamily
DN407_01045	COG2814	Major facilitator Superfamily
DN407_01060	COG0601	transmembrane transport
DN407_01065	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DN407_01070	COG0444	Belongs to the ABC transporter superfamily
DN407_01075	COG4608	Belongs to the ABC transporter superfamily
DN407_01080	COG4166	transmembrane transport
DN407_01090	COG2207	Transcriptional regulator
DN407_01105	COG4166	transmembrane transport
DN407_01110	COG4166	transmembrane transport
DN407_01115	COG0656	L-ascorbic acid biosynthetic process
DN407_01130	COG4149	molybdate abc transporter
DN407_01135	COG0725	ABC transporter, periplasmic molybdate-binding protein
DN407_01140	COG1910	domain protein
DN407_01155	COG0697	spore germination
DN407_01170	COG0204	Acyl-transferase
DN407_01180	COG1609	Transcriptional regulator
DN407_01190	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_01210	COG5298	Protein conserved in bacteria
DN407_01230	COG0488	(ABC) transporter
DN407_01245	COG0747	negative chemotaxis
DN407_01250	COG0601	transmembrane transport
DN407_01260	COG0444	Belongs to the ABC transporter superfamily
DN407_01265	COG4608	Belongs to the ABC transporter superfamily
DN407_01270	COG0561	phosphatase activity
DN407_01295	COG3185	4-Hydroxyphenylpyruvate dioxygenase
DN407_01300	COG0179	Fumarylacetoacetate (FAA) hydrolase
DN407_01310	COG0531	amino acid
DN407_01315	COG2814	Major facilitator Superfamily
DN407_01325	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DN407_01335	COG4294	response to UV
DN407_01340	COG0705	Rhomboid family
DN407_01350	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DN407_01355	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DN407_01360	COG0864	Transcriptional regulator
DN407_01365	COG2337	Toxic component of a toxin-antitoxin (TA) module
DN407_01370	COG2183	response to ionizing radiation
DN407_01470	COG0802	atpase or kinase
DN407_01475	COG1214	PFAM Peptidase M22, glycoprotease
DN407_01480	COG0456	acetyltransferase
DN407_01490	COG0488	(ABC) transporter
DN407_01505	COG1266	CAAX protease self-immunity
DN407_01525	COG2252	PERMEase
DN407_01535	COG5002	protein histidine kinase activity
DN407_01580	COG2205	protein histidine kinase activity
DN407_01585	COG0745	RESPONSE REGULATOR receiver
DN407_01625	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_01635	COG1216	Glycosyl transferase, family 2
DN407_01635	COG0463	Glycosyl transferase, family 2
DN407_01655	COG0697	spore germination
DN407_01685	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DN407_01690	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DN407_01695	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DN407_01705	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DN407_01720	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DN407_01730	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DN407_01740	COG0151	Belongs to the GarS family
DN407_01770	COG0210	DNA helicase
DN407_01780	COG4851	CamS sex pheromone cAM373 precursor
DN407_01795	COG1335	isochorismatase
DN407_01810	COG2011	ABC-type metal ion transport system permease component
DN407_01830	COG0003	Pfam Anion-transporting ATPase
DN407_01835	COG1846	Transcriptional regulator
DN407_01840	COG4682	membrane
DN407_01860	COG1597	lipid kinase activity
DN407_01870	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DN407_01880	COG1012	belongs to the aldehyde dehydrogenase family
DN407_01885	COG2076	Multidrug Resistance protein
DN407_01895	COG2309	aminopeptidase activity
DN407_01910	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_01920	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DN407_01925	COG4807	Protein conserved in bacteria
DN407_01960	COG1473	amidohydrolase
DN407_01975	COG0450	alkyl hydroperoxide reductase
DN407_01980	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
DN407_01990	COG0235	Class ii aldolase
DN407_01995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_02000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_02005	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_02030	COG0166	Belongs to the GPI family
DN407_02055	COG5002	protein histidine kinase activity
DN407_02075	COG3541	Predicted nucleotidyltransferase
DN407_02090	COG2814	Major facilitator Superfamily
DN407_02095	COG0723	plastoquinol--plastocyanin reductase activity
DN407_02095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_02105	COG0765	amino acid transport
DN407_02110	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_02120	COG0840	transmembrane signaling receptor activity
DN407_02145	COG0549	Belongs to the carbamate kinase family
DN407_02150	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_02165	COG0366	Alpha amylase catalytic
DN407_02170	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_02170	COG1263	PTS System
DN407_02170	COG2190	(PTS) system
DN407_02200	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DN407_02220	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_02230	COG1116	anion transmembrane transporter activity
DN407_02280	COG2270	Major facilitator Superfamily
DN407_02310	COG2310	stress, protein
DN407_02315	COG2310	stress, protein
DN407_02320	COG2310	stress, protein
DN407_02325	COG0861	Integral membrane protein TerC family
DN407_02335	COG3853	Toxic anion resistance protein (TelA)
DN407_02350	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DN407_02360	COG1295	ribonuclease BN
DN407_02365	COG2217	Heavy metal translocating P-type atpase
DN407_02370	COG0697	spore germination
DN407_02390	COG0586	Pfam SNARE associated Golgi protein
DN407_02405	COG3871	stress protein (general stress protein 26)
DN407_02410	COG0387	Pfam Sodium calcium exchanger
DN407_02420	COG0535	radical SAM domain protein
DN407_02440	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DN407_02445	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DN407_02460	COG3829	transcription factor binding
DN407_02470	COG0833	amino acid
DN407_02475	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DN407_02505	COG1263	PTS System
DN407_02505	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_02510	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_02525	COG0463	Glycosyl transferase, family 2
DN407_02535	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DN407_02535	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_02555	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DN407_02575	COG1228	amidohydrolase
DN407_02580	COG1090	epimerase
DN407_02610	COG1988	membrane-bound metal-dependent
DN407_02615	COG1194	a g-specific adenine glycosylase
DN407_02640	COG1132	(ABC) transporter
DN407_02645	COG4129	membrane
DN407_02650	COG0070	glutamate synthase
DN407_02650	COG0069	glutamate synthase activity
DN407_02650	COG0067	glutamate synthase
DN407_02660	COG4555	ABC transporter
DN407_02680	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DN407_02685	COG0735	belongs to the Fur family
DN407_02805	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DN407_02830	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DN407_02835	COG1716	ATPase activity
DN407_02835	COG5001	Diguanylate cyclase
DN407_02840	COG2766	serine protein kinase
DN407_02860	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DN407_02870	COG1585	Membrane protein implicated in regulation of membrane protease activity
DN407_02875	COG2268	Band 7 protein
DN407_02885	COG3290	protein histidine kinase activity
DN407_02890	COG4565	transcriptional regulatory protein
DN407_02895	COG2851	Citrate transporter
DN407_02920	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DN407_02925	COG3842	ATPase activity
DN407_02930	COG1175	transmembrane transport
DN407_02935	COG0395	ABC-type sugar transport system, permease component
DN407_02945	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DN407_02950	COG0745	RESPONSE REGULATOR receiver
DN407_02955	COG5002	protein histidine kinase activity
DN407_02965	COG4990	cell redox homeostasis
DN407_02975	COG3290	protein histidine kinase activity
DN407_02980	COG4565	transcriptional regulatory protein
DN407_02985	COG3493	citrate carrier protein
DN407_02990	COG0281	malic enzyme
DN407_03000	COG0697	spore germination
DN407_03005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_03015	COG5002	protein histidine kinase activity
DN407_03020	COG0745	RESPONSE REGULATOR receiver
DN407_03025	COG0454	-acetyltransferase
DN407_03025	COG0456	acetyltransferase
DN407_03030	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DN407_03035	COG3383	formate dehydrogenase (NAD+) activity
DN407_03040	COG2427	Protein of unknown function (DUF1641)
DN407_03055	COG0531	amino acid
DN407_03065	COG0640	Transcriptional regulator
DN407_03070	COG2217	Heavy metal translocating P-type atpase
DN407_03075	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DN407_03085	COG3227	Zinc metalloprotease (Elastase)
DN407_03105	COG2720	vancomycin resistance protein
DN407_03110	COG1316	TRANSCRIPTIONal
DN407_03115	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_03120	COG0346	lactoylglutathione lyase activity
DN407_03125	COG1253	flavin adenine dinucleotide binding
DN407_03130	COG1027	Aspartate ammonia-lyase
DN407_03135	COG1620	l-lactate permease
DN407_03150	COG3104	oligopeptide transport
DN407_03155	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_03160	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_03165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_03175	COG2226	methyltransferase
DN407_03185	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_03195	COG4548	von Willebrand factor, type A
DN407_03200	COG0714	Associated with various cellular activities
DN407_03220	COG0531	amino acid
DN407_03225	COG2188	Transcriptional regulator
DN407_03230	COG1263	PTS System
DN407_03230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_03235	COG0366	Alpha amylase catalytic
DN407_03250	COG0697	spore germination
DN407_03255	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_03260	COG1115	amino acid carrier protein
DN407_03270	COG1126	abc transporter atp-binding protein
DN407_03275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_03280	COG0765	amino acid transport
DN407_03285	COG0765	amino acid transport
DN407_03290	COG0833	amino acid
DN407_03305	COG1595	DNA-templated transcription, initiation
DN407_03315	COG2378	regulation of single-species biofilm formation
DN407_03320	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DN407_03325	COG5002	protein histidine kinase activity
DN407_03355	COG2271	Major facilitator Superfamily
DN407_03360	COG1846	Transcriptional regulator
DN407_03365	COG0477	Major facilitator Superfamily
DN407_03370	COG1609	Transcriptional regulator
DN407_03375	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DN407_03390	COG1172	Belongs to the binding-protein-dependent transport system permease family
DN407_03395	COG1879	ABC-type sugar transport system periplasmic component
DN407_03425	COG1063	alcohol dehydrogenase
DN407_03475	COG0840	transmembrane signaling receptor activity
DN407_03480	COG3583	domain protein
DN407_03480	COG3584	3D domain protein
DN407_03485	COG1476	TRANSCRIPTIONal
DN407_03505	COG3104	oligopeptide transport
DN407_03510	COG1114	Component of the transport system for branched-chain amino acids
DN407_03525	COG1113	amino acid transport
DN407_03530	COG2252	PERMEase
DN407_03545	COG2153	protein acetylation
DN407_03555	COG0569	domain protein
DN407_03555	COG0475	glutathione-regulated potassium exporter activity
DN407_03565	COG1845	cytochrome c oxidase, subunit III
DN407_03570	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DN407_03575	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DN407_03580	COG0833	amino acid
DN407_03585	COG4990	cell redox homeostasis
DN407_03600	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DN407_03605	COG0697	spore germination
DN407_03610	COG0531	amino acid
DN407_03620	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DN407_03625	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DN407_03630	COG1918	ferrous iron import across plasma membrane
DN407_03630	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DN407_03635	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DN407_03640	COG0573	inorganic phosphate transmembrane transporter activity
DN407_03645	COG0581	inorganic phosphate transmembrane transporter activity
DN407_03650	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DN407_03770	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
DN407_03790	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DN407_03795	COG1116	anion transmembrane transporter activity
DN407_03800	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_03805	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DN407_03810	COG0352	thiamine-phosphate diphosphorylase activity
DN407_03815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_03820	COG2104	thiamine diphosphate biosynthetic process
DN407_03830	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_03835	COG0351	phosphomethylpyrimidine kinase
DN407_03875	COG2205	protein histidine kinase activity
DN407_03880	COG2814	Major facilitator Superfamily
DN407_03885	COG1846	Transcriptional regulator
DN407_03910	COG1136	(ABC) transporter
DN407_03920	COG2252	PERMEase
DN407_03925	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_03985	COG0778	Nitroreductase
DN407_03990	COG2719	SpoVR family
DN407_04000	COG3591	Belongs to the peptidase S1B family
DN407_04010	COG0446	pyridine nucleotide-disulphide oxidoreductase
DN407_04015	COG1937	Protein conserved in bacteria
DN407_04020	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_04020	COG0425	Belongs to the sulfur carrier protein TusA family
DN407_04025	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_04025	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_04030	COG0425	Belongs to the sulfur carrier protein TusA family
DN407_04035	COG0425	Belongs to the sulfur carrier protein TusA family
DN407_04035	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_04045	COG2210	Belongs to the sulfur carrier protein TusA family
DN407_04050	COG0730	response to heat
DN407_04060	COG1316	TRANSCRIPTIONal
DN407_04065	COG0604	alcohol dehydrogenase
DN407_04070	COG1283	sodium-dependent phosphate transmembrane transporter activity
DN407_04090	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DN407_04090	COG3711	transcriptional antiterminator
DN407_04095	COG1447	Phosphotransferase system cellobiose-specific component IIA
DN407_04100	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DN407_04125	COG3584	3D domain protein
DN407_04125	COG1388	LysM domain
DN407_04130	COG0577	efflux transmembrane transporter activity
DN407_04135	COG1136	(ABC) transporter
DN407_04145	COG5522	Integral membrane protein (intg_mem_TP0381)
DN407_04160	COG1114	Component of the transport system for branched-chain amino acids
DN407_04165	COG3546	catalase activity
DN407_04200	COG0586	Pfam SNARE associated Golgi protein
DN407_04230	COG0531	amino acid
DN407_04235	COG0475	glutathione-regulated potassium exporter activity
DN407_04245	COG1737	Transcriptional regulator
DN407_04255	COG1263	PTS System
DN407_04255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_04265	COG2259	Doxx family
DN407_04285	COG1522	sequence-specific DNA binding
DN407_04290	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DN407_04290	COG0165	Argininosuccinate lyase
DN407_04295	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_04305	COG2076	Multidrug Resistance protein
DN407_04315	COG1309	transcriptional regulator
DN407_04320	COG2814	Major facilitator Superfamily
DN407_04325	COG1733	regulation of RNA biosynthetic process
DN407_04340	COG4533	DNA binding
DN407_04345	COG2211	Major facilitator Superfamily
DN407_04355	COG0693	protein deglycase activity
DN407_04360	COG0693	protein deglycase activity
DN407_04360	COG0753	catalase activity
DN407_04370	COG0531	amino acid
DN407_04375	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DN407_04385	COG1012	belongs to the aldehyde dehydrogenase family
DN407_04400	COG1132	(ABC) transporter
DN407_04405	COG1132	(ABC) transporter
DN407_04415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_04420	COG0765	amino acid transport
DN407_04425	COG1126	abc transporter atp-binding protein
DN407_04440	COG0189	ligase activity
DN407_04470	COG0028	Belongs to the TPP enzyme family
DN407_04475	COG3527	Alpha-acetolactate decarboxylase
DN407_04490	COG0561	phosphatase activity
DN407_04500	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_04500	COG3409	Peptidoglycan-binding domain 1 protein
DN407_04505	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DN407_04510	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_04525	COG0659	secondary active sulfate transmembrane transporter activity
DN407_04530	COG2244	polysaccharide biosynthetic process
DN407_04555	COG1024	Enoyl-CoA hydratase
DN407_04575	COG1363	Peptidase, m42
DN407_04615	COG0601	transmembrane transport
DN407_04620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DN407_04625	COG0444	Belongs to the ABC transporter superfamily
DN407_04630	COG4608	Belongs to the ABC transporter superfamily
DN407_04655	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_04680	COG0477	Major facilitator Superfamily
DN407_04685	COG3290	protein histidine kinase activity
DN407_04690	COG4565	transcriptional regulatory protein
DN407_04695	COG3181	Tripartite tricarboxylate transporter family receptor
DN407_04720	COG0433	COG0433 Predicted ATPase
DN407_04730	COG0419	ATPase involved in DNA repair
DN407_04740	COG1104	cysteine desulfurase activity
DN407_04775	COG4978	Transcriptional regulator
DN407_04775	COG0789	Transcriptional regulator
DN407_04790	COG0305	Participates in initiation and elongation during chromosome replication
DN407_04815	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DN407_04820	COG1288	antiporter activity
DN407_04830	COG0477	Major facilitator Superfamily
DN407_04850	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_04915	COG1183	phosphatidylcholine synthase activity
DN407_04935	COG2376	Dihydroxyacetone kinase
DN407_04950	COG2376	Dihydroxyacetone kinase
DN407_04985	COG2373	Large extracellular alpha-helical protein
DN407_05060	COG1191	sigma factor activity
DN407_05070	COG2208	phosphoserine phosphatase activity
DN407_05075	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DN407_05080	COG2205	protein histidine kinase activity
DN407_05080	COG0784	Response regulator, receiver
DN407_05080	COG5002	protein histidine kinase activity
DN407_05100	COG0393	Putative heavy-metal-binding
DN407_05120	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
DN407_05140	COG0420	3'-5' exonuclease activity
DN407_05145	COG4717	serine-type aminopeptidase activity
DN407_05155	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_05175	COG0346	lactoylglutathione lyase activity
DN407_05180	COG0346	lactoylglutathione lyase activity
DN407_05190	COG0457	Tetratricopeptide repeat
DN407_05200	COG2267	carboxylic ester hydrolase activity
DN407_05220	COG2140	Oxalate decarboxylase
DN407_05225	COG3620	sequence-specific DNA binding
DN407_05230	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
DN407_05235	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DN407_05245	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DN407_05250	COG1695	Transcriptional regulator
DN407_05270	COG0772	Belongs to the SEDS family
DN407_05275	COG3973	AAA domain
DN407_05305	COG4980	gas vesicle protein
DN407_05310	COG0537	adenosine 5'-monophosphoramidase activity
DN407_05315	COG1131	(ABC) transporter
DN407_05320	COG4473	ABC transporter
DN407_05335	COG1309	transcriptional regulator
DN407_05340	COG3402	PFAM membrane-flanked domain
DN407_05345	COG3428	Bacterial PH domain
DN407_05380	COG0697	spore germination
DN407_05385	COG3402	PFAM membrane-flanked domain
DN407_05390	COG3428	Bacterial PH domain
DN407_05395	COG2329	Antibiotic biosynthesis monooxygenase
DN407_05400	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_05450	COG1309	transcriptional regulator
DN407_05455	COG1511	domain protein
DN407_05455	COG1511	domain protein
DN407_05480	COG1609	Transcriptional regulator
DN407_05490	COG1234	tRNA 3'-trailer cleavage
DN407_05495	COG0095	Lipoate-protein ligase
DN407_05505	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_05515	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DN407_05525	COG4208	sulfate ABC transporter
DN407_05545	COG1408	metallophosphoesterase
DN407_05550	COG1078	dGTPase activity
DN407_05560	COG1595	DNA-templated transcription, initiation
DN407_05570	COG3708	Transcriptional regulator
DN407_05570	COG2207	Transcriptional regulator
DN407_05580	COG2205	protein histidine kinase activity
DN407_05585	COG0745	RESPONSE REGULATOR receiver
DN407_05605	COG0501	Belongs to the peptidase M48B family
DN407_05610	COG0840	transmembrane signaling receptor activity
DN407_05615	COG3693	PFAM glycoside hydrolase, family 10
DN407_05625	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DN407_05630	COG2224	Isocitrate lyase
DN407_05645	COG1278	Cold shock
DN407_05665	COG0398	Pfam SNARE associated Golgi protein
DN407_05725	COG0179	Fumarylacetoacetate (FAA) hydrolase
DN407_05750	COG0367	asparagine synthase
DN407_05760	COG0753	catalase activity
DN407_05770	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DN407_05795	COG3339	Conserved Protein
DN407_05800	COG0004	ammonium transporteR
DN407_05820	COG2996	Protein conserved in bacteria
DN407_05835	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_05850	COG0561	phosphatase activity
DN407_05870	COG2267	carboxylic ester hydrolase activity
DN407_05885	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DN407_05890	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DN407_05895	COG5504	Zn-dependent protease
DN407_05905	COG0180	Tryptophanyl-tRNA synthetase
DN407_05915	COG4166	transmembrane transport
DN407_05920	COG0601	transmembrane transport
DN407_05925	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DN407_05930	COG0444	Belongs to the ABC transporter superfamily
DN407_05935	COG4608	Belongs to the ABC transporter superfamily
DN407_05940	COG0534	Mate efflux family protein
DN407_05945	COG4166	transmembrane transport
DN407_05955	COG1393	Belongs to the ArsC family
DN407_05960	COG0861	Integral membrane protein TerC family
DN407_05970	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_05980	COG1164	Oligoendopeptidase f
DN407_05990	COG2346	COG2346, Truncated hemoglobins
DN407_05995	COG4116	CYTH
DN407_06005	COG2357	RelA SpoT domain protein
DN407_06015	COG0564	pseudouridine synthase activity
DN407_06030	COG0772	Belongs to the SEDS family
DN407_06035	COG1216	Glycosyl transferase, family 2
DN407_06055	COG0457	Tetratricopeptide repeat
DN407_06055	COG0463	Glycosyl transferase, family 2
DN407_06075	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DN407_06090	COG1091	dTDP-4-dehydrorhamnose reductase activity
DN407_06135	COG2153	protein acetylation
DN407_06145	COG2382	esterase
DN407_06170	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DN407_06185	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DN407_06185	COG0512	Glutamine amidotransferase of anthranilate synthase
DN407_06220	COG1620	l-lactate permease
DN407_06225	COG5634	Uncharacterized conserved protein (DUF2278)
DN407_06280	COG0508	dehydrogenase complex catalyzes the overall conversion of
DN407_06335	COG1686	Belongs to the peptidase S11 family
DN407_06340	COG0681	Belongs to the peptidase S26 family
DN407_06375	COG1012	belongs to the aldehyde dehydrogenase family
DN407_06385	COG1176	ABC-type spermidine putrescine transport system, permease component I
DN407_06390	COG1177	transmembrane transport
DN407_06395	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DN407_06405	COG2409	Drug exporters of the RND superfamily
DN407_06415	COG0564	pseudouridine synthase activity
DN407_06425	COG2340	Cysteine-rich secretory protein family
DN407_06430	COG0247	lactate metabolic process
DN407_06435	COG0277	FAD linked oxidase domain protein
DN407_06440	COG3835	regulator
DN407_06450	COG0745	RESPONSE REGULATOR receiver
DN407_06455	COG5002	protein histidine kinase activity
DN407_06460	COG2186	Transcriptional regulator
DN407_06480	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DN407_06490	COG2116	formate transmembrane transporter activity
DN407_06495	COG0861	Integral membrane protein TerC family
DN407_06500	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DN407_06510	COG2030	dehydratase
DN407_06530	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_06535	COG3243	poly(R)-hydroxyalkanoic acid synthase
DN407_06545	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DN407_06560	COG1840	ABC-type Fe3 transport system, periplasmic component
DN407_06565	COG3842	ATPase activity
DN407_06590	COG1349	DNA-binding transcription factor activity
DN407_06600	COG0235	Class ii aldolase
DN407_06610	COG2861	carbohydrate metabolic process
DN407_06620	COG3852	Histidine kinase
DN407_06625	COG1846	Transcriptional regulator
DN407_06635	COG2318	DinB family
DN407_06640	COG5002	protein histidine kinase activity
DN407_06650	COG0720	synthase
DN407_06665	COG4873	Protein conserved in bacteria
DN407_06695	COG1780	Probably involved in ribonucleotide reductase function
DN407_06700	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DN407_06705	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DN407_06710	COG1725	Transcriptional regulator
DN407_06715	COG1131	(ABC) transporter
DN407_06725	COG1131	(ABC) transporter
DN407_06745	COG1522	sequence-specific DNA binding
DN407_06755	COG1335	isochorismatase
DN407_06765	COG1619	proteins homologs of microcin C7 resistance protein MccF
DN407_06770	COG2070	2-Nitropropane dioxygenase
DN407_06775	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DN407_06785	COG1696	Membrane protein involved in D-alanine export
DN407_06810	COG0716	FMN binding
DN407_06850	COG1846	Transcriptional regulator
DN407_06860	COG1301	dicarboxylic acid transport
DN407_06865	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DN407_06870	COG4709	membrane
DN407_06875	COG3874	Sporulation protein YtfJ
DN407_06895	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_06900	COG0028	Belongs to the TPP enzyme family
DN407_06905	COG0440	acetolactate synthase activity
DN407_06980	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DN407_06995	COG1183	phosphatidylcholine synthase activity
DN407_07000	COG1368	sulfuric ester hydrolase activity
DN407_07010	COG0019	diaminopimelate decarboxylase activity
DN407_07030	COG0529	Catalyzes the synthesis of activated sulfate
DN407_07035	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DN407_07055	COG1648	precorrin-2 dehydrogenase activity
DN407_07060	COG0733	neurotransmitter:sodium symporter activity
DN407_07080	COG1757	Na H antiporter
DN407_07095	COG4758	membrane
DN407_07100	COG4585	Histidine kinase
DN407_07105	COG2197	response regulator
DN407_07115	COG1114	Component of the transport system for branched-chain amino acids
DN407_07165	COG0730	response to heat
DN407_07170	COG0306	phosphate transporter
DN407_07175	COG1392	Phosphate transport regulator
DN407_07180	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_07195	COG3852	Histidine kinase
DN407_07200	COG1801	Protein of unknown function DUF72
DN407_07210	COG0582	viral genome integration into host DNA
DN407_07215	COG5002	protein histidine kinase activity
DN407_07235	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DN407_07235	COG0392	lysyltransferase activity
DN407_07250	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DN407_07255	COG1686	Belongs to the peptidase S11 family
DN407_07260	COG2715	membrane protein required for spore maturation
DN407_07265	COG0700	Nucleoside recognition
DN407_07270	COG1187	pseudouridine synthase activity
DN407_07280	COG1333	cytochrome c biogenesis protein
DN407_07285	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DN407_07290	COG0745	RESPONSE REGULATOR receiver
DN407_07295	COG5002	protein histidine kinase activity
DN407_07300	COG2096	Adenosyltransferase
DN407_07315	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DN407_07320	COG1141	Ferredoxin
DN407_07330	COG0514	ATP-dependent DNA helicase (RecQ)
DN407_07335	COG1266	CAAX protease self-immunity
DN407_07345	COG1408	metallophosphoesterase
DN407_07350	COG0789	Transcriptional regulator
DN407_07360	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DN407_07380	COG0492	ferredoxin-NADP+ reductase activity
DN407_07385	COG0252	asparaginase activity
DN407_07450	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DN407_07465	COG0142	geranyltranstransferase activity
DN407_07475	COG0142	geranyltranstransferase activity
DN407_07500	COG0457	Tetratricopeptide repeat
DN407_07520	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DN407_07525	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DN407_07525	COG2010	Cytochrome c
DN407_07530	COG4347	Protein of unknown function (DUF1405)
DN407_07545	COG2738	Putative neutral zinc metallopeptidase
DN407_07555	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_07565	COG1694	Mazg nucleotide pyrophosphohydrolase
DN407_07585	COG0438	transferase activity, transferring glycosyl groups
DN407_07625	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DN407_07625	COG1199	ATP-dependent helicase activity
DN407_07645	COG3935	DnaD domain protein
DN407_07650	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DN407_07660	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_07660	COG4499	WXG100 protein secretion system (Wss), protein YukC
DN407_07715	COG0116	Belongs to the methyltransferase superfamily
DN407_07725	COG1199	ATP-dependent helicase activity
DN407_07730	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DN407_07740	COG0024	Methionine aminopeptidase
DN407_07750	COG2233	PERMEase
DN407_07755	COG2311	Membrane
DN407_07760	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DN407_07770	COG0456	acetyltransferase
DN407_07825	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DN407_07840	COG3944	biosynthesis protein
DN407_07850	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DN407_07865	COG1215	transferase activity, transferring glycosyl groups
DN407_07870	COG0438	transferase activity, transferring glycosyl groups
DN407_07885	COG0454	-acetyltransferase
DN407_07905	COG0328	RNA-DNA hybrid ribonuclease activity
DN407_07940	COG3403	YqcI/YcgG family
DN407_07945	COG1280	lysine exporter protein (LysE YggA)
DN407_07965	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DN407_07970	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DN407_07980	COG0475	glutathione-regulated potassium exporter activity
DN407_07985	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DN407_07990	COG4978	Transcriptional regulator
DN407_07990	COG0789	Transcriptional regulator
DN407_08000	COG2323	membrane
DN407_08005	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DN407_08045	COG1923	regulation of RNA biosynthetic process
DN407_08055	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DN407_08060	COG1360	Flagellar Motor Protein
DN407_08065	COG2201	protein-glutamate methylesterase activity
DN407_08070	COG0643	Histidine kinase
DN407_08070	COG2198	Histidine kinase
DN407_08075	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_08075	COG1776	CheC inhibitor of MCP methylation
DN407_08090	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DN407_08110	COG1256	bacterial-type flagellum assembly
DN407_08115	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_08135	COG1815	bacterial-type flagellum-dependent cell motility
DN407_08140	COG1558	bacterial-type flagellum-dependent cell motility
DN407_08145	COG1677	Flagellar hook-basal body complex protein FliE
DN407_08150	COG1766	The M ring may be actively involved in energy transduction
DN407_08155	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_08165	COG1157	protein secretion by the type III secretion system
DN407_08200	COG0784	Response regulator, receiver
DN407_08200	COG0835	chemotaxis
DN407_08215	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_08220	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_08225	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_08230	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DN407_08235	COG0741	lytic transglycosylase activity
DN407_08245	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_08250	COG1776	CheC inhibitor of MCP methylation
DN407_08250	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DN407_08260	COG1338	Plays a role in the flagellum-specific transport system
DN407_08265	COG1987	bacterial-type flagellum assembly
DN407_08275	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DN407_08280	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DN407_08285	COG1419	protein localization to endoplasmic reticulum
DN407_08290	COG4786	Flagellar basal body rod
DN407_08295	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DN407_08330	COG2329	Antibiotic biosynthesis monooxygenase
DN407_08360	COG3842	ATPase activity
DN407_08365	COG0725	ABC transporter, periplasmic molybdate-binding protein
DN407_08370	COG1177	transmembrane transport
DN407_08435	COG0367	asparagine synthase
DN407_08465	COG1802	Transcriptional regulator
DN407_08470	COG0697	spore germination
DN407_08480	COG0523	cobalamin synthesis protein
DN407_08490	COG0701	Predicted permease
DN407_08505	COG1757	Na H antiporter
DN407_08510	COG0789	Transcriptional regulator
DN407_08535	COG0534	Mate efflux family protein
DN407_08540	COG3340	Belongs to the peptidase S51 family
DN407_08560	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_08570	COG0457	Tetratricopeptide repeat
DN407_08590	COG2733	membrane
DN407_08630	COG1131	(ABC) transporter
DN407_08650	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_08655	COG0528	UMP kinase activity
DN407_08665	COG1027	Aspartate ammonia-lyase
DN407_08670	COG0281	malic enzyme
DN407_08675	COG4191	Histidine kinase
DN407_08680	COG0784	Response regulator, receiver
DN407_08685	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DN407_08740	COG2814	Major facilitator Superfamily
DN407_08760	COG1695	Transcriptional regulator
DN407_08770	COG0477	Major facilitator Superfamily
DN407_08780	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DN407_08785	COG2223	nitrite transmembrane transporter activity
DN407_08790	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DN407_08810	COG0733	neurotransmitter:sodium symporter activity
DN407_08815	COG5566	PFAM Mor transcription activator
DN407_08820	COG2323	membrane
DN407_08840	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DN407_08850	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_08855	COG0028	Belongs to the TPP enzyme family
DN407_08875	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DN407_08900	COG2814	Major facilitator Superfamily
DN407_08905	COG3384	dioxygenase
DN407_08915	COG3279	Response regulator of the LytR AlgR family
DN407_08920	COG0427	acetyl-CoA hydrolase
DN407_08940	COG4166	transmembrane transport
DN407_08945	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_08950	COG1914	H( )-stimulated, divalent metal cation uptake system
DN407_08965	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DN407_08970	COG0531	amino acid
DN407_09005	COG1309	transcriptional regulator
DN407_09010	COG2390	Transcriptional regulator
DN407_09020	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_09025	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
DN407_09040	COG4846	Membrane protein involved in cytochrome C biogenesis
DN407_09065	COG0006	proline dipeptidase activity
DN407_09075	COG2132	Multicopper oxidase
DN407_09110	COG1114	Component of the transport system for branched-chain amino acids
DN407_09125	COG2372	response to copper ion
DN407_09125	COG1276	copper resistance
DN407_09130	COG4549	nuclear export factor GLE1
DN407_09135	COG0697	spore germination
DN407_09140	COG0583	DNA-binding transcription factor activity
DN407_09145	COG1959	2 iron, 2 sulfur cluster binding
DN407_09150	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
DN407_09155	COG0778	Nitroreductase
DN407_09165	COG0628	permease
DN407_09175	COG1231	oxidoreductase activity
DN407_09185	COG0523	cobalamin synthesis protein
DN407_09195	COG0411	ABC transporter
DN407_09215	COG0583	DNA-binding transcription factor activity
DN407_09225	COG1942	4-Oxalocrotonate Tautomerase
DN407_09240	COG1271	oxidase subunit
DN407_09245	COG1294	oxidase, subunit
DN407_09250	COG4988	ABC transporter
DN407_09255	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DN407_09265	COG1216	Glycosyl transferase, family 2
DN407_09305	COG1686	Belongs to the peptidase S11 family
DN407_09320	COG0791	NLP P60 protein
DN407_09320	COG1388	LysM domain
DN407_09330	COG1132	(ABC) transporter
DN407_09335	COG0745	RESPONSE REGULATOR receiver
DN407_09340	COG5002	protein histidine kinase activity
DN407_09345	COG0300	oxidoreductase activity
DN407_09355	COG0726	polysaccharide deacetylase
DN407_09375	COG0460	homoserine dehydrogenase
DN407_09400	COG1316	TRANSCRIPTIONal
DN407_09410	COG0745	RESPONSE REGULATOR receiver
DN407_09415	COG5002	protein histidine kinase activity
DN407_09420	COG0726	polysaccharide deacetylase
DN407_09430	COG1285	pathogenesis
DN407_09435	COG1247	-acetyltransferase
DN407_09445	COG4264	IucA IucC family
DN407_09450	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_09465	COG1082	Xylose isomerase domain protein TIM barrel
DN407_09475	COG2814	Major facilitator Superfamily
DN407_09480	COG1279	arginine transmembrane transporter activity
DN407_09485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_09495	COG1752	Esterase of the alpha-beta hydrolase superfamily
DN407_09530	COG0577	efflux transmembrane transporter activity
DN407_09535	COG2002	toxin-antitoxin pair type II binding
DN407_09540	COG1404	Belongs to the peptidase S8 family
DN407_09575	COG0840	transmembrane signaling receptor activity
DN407_09590	COG3949	Membrane
DN407_09595	COG0783	Belongs to the Dps family
DN407_09610	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DN407_09620	COG1231	oxidoreductase activity
DN407_09625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_09630	COG4989	oxidoreductase activity
DN407_09635	COG0523	cobalamin synthesis protein
DN407_09640	COG0456	acetyltransferase
DN407_09645	COG0803	Belongs to the bacterial solute-binding protein 9 family
DN407_09650	COG0702	epimerase
DN407_09660	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DN407_09670	COG4166	transmembrane transport
DN407_09695	COG5337	Spore coat protein CotH
DN407_09700	COG1051	belongs to the nudix hydrolase family
DN407_09705	COG0586	Pfam SNARE associated Golgi protein
DN407_09710	COG2244	polysaccharide biosynthetic process
DN407_09720	COG0701	Predicted permease
DN407_09725	COG3689	TIGRFAM TIGR03943 family protein
DN407_09730	COG1607	acyl-coa hydrolase
DN407_09740	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_09755	COG0702	epimerase
DN407_09760	COG2839	Protein conserved in bacteria
DN407_09765	COG1253	flavin adenine dinucleotide binding
DN407_09780	COG1114	Component of the transport system for branched-chain amino acids
DN407_09785	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DN407_09805	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_09815	COG1876	peptidase activity
DN407_09830	COG2211	Major facilitator Superfamily
DN407_09845	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_09855	COG0561	phosphatase activity
DN407_09870	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DN407_09890	COG1819	glycosyl
DN407_09895	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_09900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_09930	COG0456	acetyltransferase
DN407_09950	COG1511	domain protein
DN407_09950	COG0842	Transport permease protein
DN407_09965	COG4499	WXG100 protein secretion system (Wss), protein YukC
DN407_10040	COG3874	Sporulation protein YtfJ
DN407_10065	COG2226	methyltransferase
DN407_10085	COG1082	Xylose isomerase domain protein TIM barrel
DN407_10090	COG0346	lactoylglutathione lyase activity
DN407_10100	COG0604	alcohol dehydrogenase
DN407_10105	COG1595	DNA-templated transcription, initiation
DN407_10130	COG0386	Belongs to the glutathione peroxidase family
DN407_10135	COG1305	Transglutaminase-like
DN407_10140	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
DN407_10145	COG0714	Associated with various cellular activities
DN407_10150	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DN407_10155	COG1140	nitrate reductase beta subunit
DN407_10160	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DN407_10165	COG2181	nitrate reductase activity
DN407_10170	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_10175	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DN407_10180	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_10185	COG0303	'Molybdopterin
DN407_10190	COG0314	molybdopterin synthase activity
DN407_10195	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DN407_10200	COG2223	nitrite transmembrane transporter activity
DN407_10225	COG1648	precorrin-2 dehydrogenase activity
DN407_10235	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DN407_10235	COG1587	Uroporphyrinogen-III synthase
DN407_10240	COG2146	nitrite reductase [NAD(P)H] activity
DN407_10245	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DN407_10250	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
DN407_10285	COG2359	stage V sporulation protein S
DN407_10305	COG0457	Tetratricopeptide repeat
DN407_10320	COG1418	mRNA catabolic process
DN407_10325	COG0488	(ABC) transporter
DN407_10340	COG0629	single-stranded DNA binding
DN407_10350	COG1413	lyase activity
DN407_10365	COG2521	methyltransferase
DN407_10365	COG2136	Putative SAM-dependent methyltransferase
DN407_10370	COG0018	arginyl-trna synthetase
DN407_10425	COG0017	Asparaginyl-tRNA synthetase
DN407_10430	COG0733	neurotransmitter:sodium symporter activity
DN407_10455	COG2610	gluconate transmembrane transporter activity
DN407_10465	COG1794	racemase activity, acting on amino acids and derivatives
DN407_10475	COG0456	acetyltransferase
DN407_10485	COG3655	Transcriptional regulator
DN407_10490	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DN407_10500	COG1131	(ABC) transporter
DN407_10505	COG4473	ABC transporter
DN407_10515	COG0546	phosphoglycolate phosphatase activity
DN407_10530	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_10545	COG0768	penicillin binding
DN407_10555	COG0204	Acyl-transferase
DN407_10560	COG1272	protein, Hemolysin III
DN407_10570	COG0805	protein transport
DN407_10580	COG1307	EDD domain protein, DegV family
DN407_10590	COG1999	signal sequence binding
DN407_10595	COG0071	Belongs to the small heat shock protein (HSP20) family
DN407_10600	COG0367	asparagine synthase
DN407_10615	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_10620	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_10625	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DN407_10645	COG1335	isochorismatase
DN407_10660	COG0668	transmembrane transport
DN407_10665	COG4585	Histidine kinase
DN407_10665	COG2203	Gaf domain
DN407_10670	COG2197	response regulator
DN407_10675	COG1737	Transcriptional regulator
DN407_10680	COG0384	phenazine biosynthesis protein PhzF
DN407_10685	COG1064	alcohol dehydrogenase
DN407_10710	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DN407_10745	COG1125	glycine betaine transport
DN407_10745	COG0517	IMP dehydrogenase activity
DN407_10750	COG1174	glycine betaine transport
DN407_10785	COG1253	flavin adenine dinucleotide binding
DN407_10790	COG1012	belongs to the aldehyde dehydrogenase family
DN407_10795	COG5506	Protein of unknown function (DUF1694)
DN407_10810	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DN407_10815	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DN407_10820	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DN407_10825	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DN407_10830	COG0456	acetyltransferase
DN407_10835	COG3829	transcription factor binding
DN407_10840	COG1509	lysine 2,3-aminomutase activity
DN407_10875	COG3064	Membrane
DN407_10875	COG0515	serine threonine protein kinase
DN407_10875	COG4991	sh3 domain protein
DN407_10885	COG0671	phosphoesterase, PA-phosphatase related
DN407_10890	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DN407_10895	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_10965	COG0300	oxidoreductase activity
DN407_10985	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_10985	COG4499	WXG100 protein secretion system (Wss), protein YukC
DN407_10995	COG2814	Major facilitator Superfamily
DN407_11000	COG4841	protein insertion into membrane
DN407_11005	COG0372	Belongs to the citrate synthase family
DN407_11010	COG2079	MmgE PrpD family protein
DN407_11015	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DN407_11020	COG1960	acyl-CoA dehydrogenase activity
DN407_11025	COG2084	Dehydrogenase
DN407_11035	COG1280	lysine exporter protein (LysE YggA)
DN407_11040	COG1024	Enoyl-CoA hydratase
DN407_11055	COG0420	3'-5' exonuclease activity
DN407_11060	COG0419	ATPase involved in DNA repair
DN407_11075	COG2223	nitrite transmembrane transporter activity
DN407_11080	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_11085	COG1169	isochorismate synthase
DN407_11090	COG1021	2,3-dihydroxybenzoate-AMP ligase
DN407_11095	COG1535	isochorismatase
DN407_11095	COG3433	isochorismatase activity
DN407_11100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DN407_11105	COG3251	PFAM MbtH domain protein
DN407_11110	COG2814	Major facilitator Superfamily
DN407_11125	COG0776	regulation of translation
DN407_11135	COG2318	DinB family
DN407_11145	COG1115	amino acid carrier protein
DN407_11165	COG1187	pseudouridine synthase activity
DN407_11170	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DN407_11175	COG1136	(ABC) transporter
DN407_11190	COG0028	Belongs to the TPP enzyme family
DN407_11230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_11285	COG1247	-acetyltransferase
DN407_11320	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_11350	COG0583	DNA-binding transcription factor activity
DN407_11355	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DN407_11375	COG0583	DNA-binding transcription factor activity
DN407_11380	COG2258	MOSC domain
DN407_11395	COG1132	(ABC) transporter
DN407_11400	COG1132	(ABC) transporter
DN407_11430	COG1396	sequence-specific DNA binding
DN407_11490	COG1649	PFAM Uncharacterised BCR, COG1649
DN407_11515	COG2971	BadF BadG BcrA BcrD
DN407_11525	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DN407_11535	COG1846	Transcriptional regulator
DN407_11550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_11565	COG1309	transcriptional regulator
DN407_11585	COG3615	Tellurite resistance protein tehB
DN407_11585	COG0500	methyltransferase
DN407_11595	COG2226	methyltransferase
DN407_11600	COG3961	Belongs to the TPP enzyme family
DN407_11605	COG1846	Transcriptional regulator
DN407_11635	COG2195	Cleaves the N-terminal amino acid of tripeptides
DN407_11660	COG2002	toxin-antitoxin pair type II binding
DN407_11670	COG0730	response to heat
DN407_11675	COG0110	maltose O-acetyltransferase activity
DN407_11680	COG1686	Belongs to the peptidase S11 family
DN407_11695	COG2814	Major facilitator Superfamily
DN407_11750	COG2312	Erythromycin esterase
DN407_11755	COG0741	lytic transglycosylase activity
DN407_11760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_11775	COG1396	sequence-specific DNA binding
DN407_11790	COG0726	polysaccharide deacetylase
DN407_11795	COG1309	transcriptional regulator
DN407_11800	COG0367	asparagine synthase
DN407_11805	COG4585	Histidine kinase
DN407_11815	COG1404	Belongs to the peptidase S8 family
DN407_11845	COG1760	l-serine dehydratase
DN407_11850	COG1760	l-serine dehydratase
DN407_11855	COG0814	amino acid
DN407_11885	COG0076	glutamate decarboxylase activity
DN407_11910	COG0768	penicillin binding
DN407_11915	COG1595	DNA-templated transcription, initiation
DN407_11925	COG0768	penicillin binding
DN407_11940	COG1408	metallophosphoesterase
DN407_11950	COG1131	(ABC) transporter
DN407_11960	COG1309	transcriptional regulator
DN407_11975	COG1960	acyl-CoA dehydrogenase activity
DN407_11980	COG0439	Biotin carboxylase
DN407_11985	COG0511	ligase activity, forming carbon-carbon bonds
DN407_11990	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DN407_11995	COG1024	Enoyl-CoA hydratase
DN407_12000	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DN407_12005	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DN407_12055	COG1686	Belongs to the peptidase S11 family
DN407_12080	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DN407_12095	COG3227	Zinc metalloprotease (Elastase)
DN407_12100	COG2207	Transcriptional regulator
DN407_12140	COG1733	regulation of RNA biosynthetic process
DN407_12155	COG1942	4-Oxalocrotonate Tautomerase
DN407_12160	COG0583	DNA-binding transcription factor activity
DN407_12200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_12210	COG2368	4-hydroxyphenylacetate
DN407_12235	COG2323	membrane
DN407_12240	COG0693	protein deglycase activity
DN407_12250	COG3386	PFAM SMP-30 Gluconolaconase
DN407_12265	COG3773	Cell wall hydrolase
DN407_12275	COG0745	RESPONSE REGULATOR receiver
DN407_12280	COG2205	protein histidine kinase activity
DN407_12295	COG1136	(ABC) transporter
DN407_12300	COG0577	efflux transmembrane transporter activity
DN407_12320	COG0460	homoserine dehydrogenase
DN407_12325	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_12335	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DN407_12365	COG0582	viral genome integration into host DNA
DN407_12390	COG1396	sequence-specific DNA binding
DN407_12420	COG5377	YqaJ viral recombinase family
DN407_12425	COG3723	Recombinational DNA repair protein, rece pathway
DN407_12450	COG5582	Belongs to the UPF0302 family
DN407_12540	COG3728	DNA packaging
DN407_12540	COG5484	DNA packaging
DN407_12640	COG4824	toxin secretion phage lysis holin
DN407_12680	COG1113	amino acid transport
DN407_12685	COG1280	lysine exporter protein (LysE YggA)
DN407_12690	COG3403	YqcI/YcgG family
DN407_12695	COG5577	PFAM Coat F domain
DN407_12740	COG2124	cytochrome p450
DN407_12780	COG0561	phosphatase activity
DN407_12785	COG5002	protein histidine kinase activity
DN407_12800	COG1819	glycosyl
DN407_12805	COG1794	racemase activity, acting on amino acids and derivatives
DN407_12830	COG2205	protein histidine kinase activity
DN407_12910	COG0745	RESPONSE REGULATOR receiver
DN407_12915	COG5002	protein histidine kinase activity
DN407_12920	COG0604	alcohol dehydrogenase
DN407_12925	COG0671	phosphoesterase, PA-phosphatase related
DN407_12985	COG0693	protein deglycase activity
DN407_13000	COG2814	Major facilitator Superfamily
DN407_13005	COG2814	Major facilitator Superfamily
DN407_13020	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_13035	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_13040	COG0697	spore germination
DN407_13065	COG0494	nUDIX hydrolase
DN407_13080	COG2223	nitrite transmembrane transporter activity
DN407_13095	COG0592	DNA-directed DNA polymerase activity
DN407_13115	COG3878	Protein conserved in bacteria
DN407_13140	COG4667	esterase of the alpha-beta hydrolase superfamily
DN407_13180	COG0322	excinuclease ABC activity
DN407_13220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_13255	COG0745	RESPONSE REGULATOR receiver
DN407_13260	COG5002	protein histidine kinase activity
DN407_13275	COG1136	(ABC) transporter
DN407_13280	COG0577	efflux transmembrane transporter activity
DN407_13285	COG1073	alpha beta
DN407_13295	COG0076	glutamate decarboxylase activity
DN407_13310	COG1523	belongs to the glycosyl hydrolase 13 family
DN407_13315	COG3227	Zinc metalloprotease (Elastase)
DN407_13320	COG0737	Belongs to the 5'-nucleotidase family
DN407_13335	COG0201	protein transport
DN407_13340	COG0697	spore germination
DN407_13345	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_13380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_13395	COG2959	enzyme of heme biosynthesis
DN407_13400	COG3773	Cell wall hydrolase
DN407_13400	COG3409	Peptidoglycan-binding domain 1 protein
DN407_13435	COG1309	transcriptional regulator
DN407_13480	COG3284	Transcriptional regulator
DN407_13495	COG1349	DNA-binding transcription factor activity
DN407_13510	COG1959	2 iron, 2 sulfur cluster binding
DN407_13525	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DN407_13530	COG0508	dehydrogenase complex catalyzes the overall conversion of
DN407_13535	COG0022	dehydrogenase e1 component
DN407_13540	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DN407_13550	COG2814	Major facilitator Superfamily
DN407_13560	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_13590	COG4176	ABC-type proline glycine betaine transport system permease component
DN407_13595	COG0517	IMP dehydrogenase activity
DN407_13595	COG4175	Glycine betaine
DN407_13605	COG0740	serine-type endopeptidase activity
DN407_13625	COG2153	protein acetylation
DN407_13630	COG3397	chitin binding
DN407_13635	COG1819	glycosyl
DN407_13655	COG2205	protein histidine kinase activity
DN407_13660	COG2226	methyltransferase
DN407_13665	COG2315	Protein conserved in bacteria
DN407_13710	COG0456	acetyltransferase
DN407_13715	COG3973	AAA domain
DN407_13730	COG0514	ATP-dependent DNA helicase (RecQ)
DN407_13760	COG4637	Psort location Cytoplasmic, score
DN407_13775	COG3397	chitin binding
DN407_13790	COG1162	GTPase activity
DN407_13795	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DN407_13800	COG1115	amino acid carrier protein
DN407_13805	COG1012	belongs to the aldehyde dehydrogenase family
DN407_13810	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DN407_13820	COG3938	Belongs to the proline racemase family
DN407_13825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_13865	COG0586	Pfam SNARE associated Golgi protein
DN407_13875	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DN407_13885	COG4166	transmembrane transport
DN407_13895	COG4948	Mandelate Racemase Muconate Lactonizing
DN407_13910	COG0667	Aldo Keto reductase
DN407_13955	COG3850	Histidine kinase
DN407_13955	COG5002	protein histidine kinase activity
DN407_13960	COG0745	RESPONSE REGULATOR receiver
DN407_14000	COG1164	Oligoendopeptidase f
DN407_14005	COG1307	EDD domain protein, DegV family
DN407_14045	COG2814	Major facilitator Superfamily
DN407_14055	COG1664	Polymer-forming cytoskeletal
DN407_14060	COG0789	Transcriptional regulator
DN407_14065	COG4533	DNA binding
DN407_14070	COG2814	Major facilitator Superfamily
DN407_14070	COG0477	Major facilitator Superfamily
DN407_14095	COG2261	transglycosylase associated protein
DN407_14110	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
DN407_14145	COG0436	Aminotransferase
DN407_14150	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DN407_14160	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DN407_14175	COG1131	(ABC) transporter
DN407_14225	COG0628	permease
DN407_14235	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DN407_14240	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_14245	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DN407_14275	COG2746	aminoglycoside 3-N-acetyltransferase activity
DN407_14295	COG0697	spore germination
DN407_14325	COG4912	Dna alkylation repair
DN407_14330	COG0346	lactoylglutathione lyase activity
DN407_14335	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_14340	COG0726	polysaccharide deacetylase
DN407_14345	COG0861	Integral membrane protein TerC family
DN407_14350	COG1368	sulfuric ester hydrolase activity
DN407_14355	COG0488	(ABC) transporter
DN407_14360	COG2409	Drug exporters of the RND superfamily
DN407_14360	COG1033	growth of symbiont in host cell
DN407_14365	COG1309	transcriptional regulator
DN407_14380	COG0287	Prephenate dehydrogenase
DN407_14395	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DN407_14395	COG1605	Chorismate mutase
DN407_14450	COG3584	3D domain protein
DN407_14450	COG1388	LysM domain
DN407_14460	COG0346	lactoylglutathione lyase activity
DN407_14465	COG0277	FAD linked oxidase domain protein
DN407_14495	COG1879	ABC-type sugar transport system periplasmic component
DN407_14500	COG1172	Belongs to the binding-protein-dependent transport system permease family
DN407_14505	COG1172	Belongs to the binding-protein-dependent transport system permease family
DN407_14515	COG2390	Transcriptional regulator
DN407_14520	COG1070	Carbohydrate kinase
DN407_14540	COG2329	Antibiotic biosynthesis monooxygenase
DN407_14560	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_14575	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_14580	COG4187	Peptidase family M20/M25/M40
DN407_14585	COG1414	Transcriptional regulator
DN407_14595	COG0833	amino acid
DN407_14610	COG3239	Fatty acid desaturase
DN407_14620	COG2720	vancomycin resistance protein
DN407_14625	COG1785	Belongs to the alkaline phosphatase family
DN407_14635	COG3655	Transcriptional regulator
DN407_14655	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_14660	COG0346	lactoylglutathione lyase activity
DN407_14685	COG0714	Associated with various cellular activities
DN407_14710	COG0463	Glycosyl transferase, family 2
DN407_14740	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DN407_14745	COG0753	catalase activity
DN407_14785	COG0714	Associated with various cellular activities
DN407_14815	COG0778	Nitroreductase
DN407_14820	COG1846	Transcriptional regulator
DN407_14840	COG3831	ATPase activity
DN407_14840	COG4884	unkown
DN407_14865	COG0590	tRNA wobble adenosine to inosine editing
DN407_14865	COG0037	tRNA processing
DN407_14870	COG0456	acetyltransferase
DN407_14885	COG0697	spore germination
DN407_14890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_14940	COG0730	response to heat
DN407_14950	COG0833	amino acid
DN407_14965	COG4335	DNA alkylation repair
DN407_15030	COG1984	allophanate hydrolase subunit 2
DN407_15035	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DN407_15040	COG1414	Transcriptional regulator
DN407_15050	COG3142	Participates in the control of copper homeostasis
DN407_15055	COG0640	Transcriptional regulator
DN407_15065	COG1960	acyl-CoA dehydrogenase activity
DN407_15100	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
DN407_15115	COG0574	Belongs to the PEP-utilizing enzyme family
DN407_15115	COG3848	Pyruvate phosphate dikinase
DN407_15135	COG1522	sequence-specific DNA binding
DN407_15140	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_15145	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_15165	COG1063	alcohol dehydrogenase
DN407_15175	COG1027	Aspartate ammonia-lyase
DN407_15180	COG0252	asparaginase activity
DN407_15185	COG1396	sequence-specific DNA binding
DN407_15220	COG5002	protein histidine kinase activity
DN407_15245	COG2207	Transcriptional regulator
DN407_15270	COG0322	excinuclease ABC activity
DN407_15275	COG0531	amino acid
DN407_15280	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_15290	COG0531	amino acid
DN407_15295	COG0697	spore germination
DN407_15300	COG0784	Response regulator, receiver
DN407_15305	COG4191	Histidine kinase
DN407_15315	COG1115	amino acid carrier protein
DN407_15340	COG0737	Belongs to the 5'-nucleotidase family
DN407_15345	COG2267	carboxylic ester hydrolase activity
DN407_15350	COG1335	isochorismatase
DN407_15370	COG0583	DNA-binding transcription factor activity
DN407_15385	COG2814	Major facilitator Superfamily
DN407_15420	COG0598	Magnesium transport protein CorA
DN407_15445	COG1073	alpha beta
DN407_15465	COG0415	Belongs to the DNA photolyase family
DN407_15470	COG0288	reversible hydration of carbon dioxide
DN407_15480	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DN407_15485	COG5609	conserved protein (DUF2294)
DN407_15490	COG0726	polysaccharide deacetylase
DN407_15495	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_15500	COG5002	protein histidine kinase activity
DN407_15505	COG0745	RESPONSE REGULATOR receiver
DN407_15515	COG1575	Belongs to the MenA family. Type 1 subfamily
DN407_15525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_15535	COG0798	PFAM Bile acid sodium symporter
DN407_15540	COG0346	lactoylglutathione lyase activity
DN407_15545	COG0640	Transcriptional regulator
DN407_15555	COG1266	CAAX protease self-immunity
DN407_15570	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DN407_15600	COG3320	Male sterility
DN407_15600	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DN407_15605	COG1309	transcriptional regulator
DN407_15610	COG2814	Major facilitator Superfamily
DN407_15615	COG1309	transcriptional regulator
DN407_15620	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_15625	COG1522	sequence-specific DNA binding
DN407_15640	COG0346	lactoylglutathione lyase activity
DN407_15735	COG2814	Major facilitator Superfamily
DN407_15750	COG2515	1-aminocyclopropane-1-carboxylate deaminase
DN407_15760	COG1690	Belongs to the RtcB family
DN407_15770	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DN407_15790	COG0577	efflux transmembrane transporter activity
DN407_15810	COG3850	Histidine kinase
DN407_15810	COG5002	protein histidine kinase activity
DN407_15820	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_15850	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DN407_15895	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_15895	COG3409	Peptidoglycan-binding domain 1 protein
DN407_15965	COG1876	peptidase activity
DN407_15970	COG2843	Capsule synthesis protein
DN407_15980	COG0477	Major facilitator Superfamily
DN407_15995	COG1846	Transcriptional regulator
DN407_16000	COG2814	Major facilitator Superfamily
DN407_16020	COG2031	fatty acid transporter
DN407_16030	COG2249	NAD(P)H dehydrogenase (quinone) activity
DN407_16085	COG1288	antiporter activity
DN407_16090	COG2356	endonuclease I
DN407_16105	COG3620	sequence-specific DNA binding
DN407_16110	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DN407_16120	COG1733	regulation of RNA biosynthetic process
DN407_16125	COG0778	Nitroreductase
DN407_16155	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_16165	COG1131	(ABC) transporter
DN407_16190	COG1011	Hydrolase
DN407_16225	COG0180	Tryptophanyl-tRNA synthetase
DN407_16235	COG0628	permease
DN407_16260	COG0500	methyltransferase
DN407_16270	COG0477	Major facilitator Superfamily
DN407_16300	COG1253	flavin adenine dinucleotide binding
DN407_16305	COG0789	Transcriptional regulator
DN407_16315	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DN407_16345	COG0697	spore germination
DN407_16355	COG1357	PFAM Pentapeptide repeats (8 copies)
DN407_16360	COG3813	Protein conserved in bacteria
DN407_16365	COG2706	6-phosphogluconolactonase activity
DN407_16370	COG1070	Carbohydrate kinase
DN407_16385	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DN407_16390	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DN407_16395	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DN407_16410	COG0604	alcohol dehydrogenase
DN407_16415	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DN407_16425	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_16445	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_16445	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_16450	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DN407_16455	COG1733	regulation of RNA biosynthetic process
DN407_16470	COG0656	L-ascorbic acid biosynthetic process
DN407_16475	COG2814	Major facilitator Superfamily
DN407_16495	COG1846	Transcriptional regulator
DN407_16505	COG0814	amino acid
DN407_16545	COG2188	Transcriptional regulator
DN407_16550	COG0673	inositol 2-dehydrogenase activity
DN407_16555	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DN407_16560	COG1733	regulation of RNA biosynthetic process
DN407_16565	COG1733	regulation of RNA biosynthetic process
DN407_16590	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_16610	COG0384	phenazine biosynthesis protein PhzF
DN407_16620	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_16625	COG2249	NAD(P)H dehydrogenase (quinone) activity
DN407_16630	COG1733	regulation of RNA biosynthetic process
DN407_16645	COG0726	polysaccharide deacetylase
DN407_16655	COG1191	sigma factor activity
DN407_16725	COG1151	hydroxylamine reductase activity
DN407_16750	COG2072	flavoprotein involved in K transport
DN407_16785	COG1113	amino acid transport
DN407_16790	COG2814	Major facilitator Superfamily
DN407_16825	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DN407_16830	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DN407_16840	COG1247	-acetyltransferase
DN407_16850	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_16855	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_16880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_16895	COG0583	DNA-binding transcription factor activity
DN407_16905	COG2890	protein-(glutamine-N5) methyltransferase activity
DN407_16920	COG1193	negative regulation of DNA recombination
DN407_16930	COG2162	N-hydroxyarylamine O-acetyltransferase activity
DN407_16935	COG1164	Oligoendopeptidase f
DN407_16940	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_16965	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_16975	COG0640	Transcriptional regulator
DN407_16980	COG0604	alcohol dehydrogenase
DN407_16990	COG0457	Tetratricopeptide repeat
DN407_17005	COG0277	FAD linked oxidase domain protein
DN407_17030	COG1183	phosphatidylcholine synthase activity
DN407_17040	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_17040	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_17045	COG1252	NADH dehydrogenase
DN407_17055	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DN407_17065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_17080	COG0457	Tetratricopeptide repeat
DN407_17125	COG3300	MHYT domain
DN407_17125	COG5001	Diguanylate cyclase
DN407_17160	COG3852	Histidine kinase
DN407_17170	COG1285	pathogenesis
DN407_17180	COG2514	catechol 2,3-dioxygenase activity
DN407_17185	COG2720	vancomycin resistance protein
DN407_17210	COG1278	Cold shock
DN407_17220	COG0716	FMN binding
DN407_17235	COG0494	nUDIX hydrolase
DN407_17255	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_17265	COG0165	Argininosuccinate lyase
DN407_17280	COG4145	pantothenate transmembrane transporter activity
DN407_17285	COG3924	membrane
DN407_17290	COG1012	belongs to the aldehyde dehydrogenase family
DN407_17295	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_17305	COG1657	PFAM Prenyltransferase squalene oxidase
DN407_17310	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
DN407_17315	COG2962	Rard protein
DN407_17320	COG3326	Membrane
DN407_17335	COG0489	protein tyrosine kinase activity
DN407_17345	COG0314	molybdopterin synthase activity
DN407_17350	COG0303	'Molybdopterin
DN407_17355	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_17360	COG2116	formate transmembrane transporter activity
DN407_17370	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DN407_17375	COG5609	conserved protein (DUF2294)
DN407_17380	COG2427	Protein of unknown function (DUF1641)
DN407_17385	COG3383	formate dehydrogenase (NAD+) activity
DN407_17390	COG0697	spore germination
DN407_17405	COG0531	amino acid
DN407_17440	COG2226	methyltransferase
DN407_17445	COG4166	transmembrane transport
DN407_17450	COG4166	transmembrane transport
DN407_17455	COG4166	transmembrane transport
DN407_17460	COG1316	TRANSCRIPTIONal
DN407_17470	COG1595	DNA-templated transcription, initiation
DN407_17480	COG1131	(ABC) transporter
DN407_17500	COG0673	inositol 2-dehydrogenase activity
DN407_17505	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DN407_17510	COG0187	DNA topoisomerase II activity
DN407_17515	COG1832	CoA-binding protein
DN407_17520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_17525	COG0745	RESPONSE REGULATOR receiver
DN407_17535	COG1328	CTP reductase activity
DN407_17535	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DN407_17545	COG4841	protein insertion into membrane
DN407_17550	COG0824	Thioesterase
DN407_17580	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_17595	COG1132	(ABC) transporter
DN407_17600	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DN407_17610	COG0726	polysaccharide deacetylase
DN407_17630	COG2211	Major facilitator Superfamily
DN407_17640	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DN407_17655	COG0183	Belongs to the thiolase family
DN407_17660	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_17665	COG1268	BioY protein
DN407_17670	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_17675	COG1396	sequence-specific DNA binding
DN407_17700	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DN407_17720	COG0830	nickel cation binding
DN407_17760	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_17775	COG5002	protein histidine kinase activity
DN407_17780	COG0400	carboxylic ester hydrolase activity
DN407_17785	COG0346	lactoylglutathione lyase activity
DN407_17795	COG0069	glutamate synthase activity
DN407_17800	COG1902	pentaerythritol trinitrate reductase activity
DN407_17805	COG1329	Transcriptional regulator
DN407_17810	COG0010	Belongs to the arginase family
DN407_17835	COG2226	methyltransferase
DN407_17865	COG4846	Membrane protein involved in cytochrome C biogenesis
DN407_17870	COG0785	Cytochrome C biogenesis protein
DN407_17895	COG1131	(ABC) transporter
DN407_17910	COG0583	DNA-binding transcription factor activity
DN407_17920	COG1346	cytolysis
DN407_17935	COG0730	response to heat
DN407_17960	COG1132	(ABC) transporter
DN407_17965	COG1132	(ABC) transporter
DN407_18005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_18010	COG0737	Belongs to the 5'-nucleotidase family
DN407_18020	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DN407_18040	COG1695	Transcriptional regulator
DN407_18045	COG0174	glutamine synthetase
DN407_18050	COG0789	Transcriptional regulator
DN407_18055	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
DN407_18060	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DN407_18065	COG2860	membrane
DN407_18070	COG0464	growth
DN407_18100	COG3584	3D domain protein
DN407_18100	COG1388	LysM domain
DN407_18105	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DN407_18105	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DN407_18105	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DN407_18110	COG1105	Belongs to the carbohydrate kinase PfkB family
DN407_18115	COG1349	DNA-binding transcription factor activity
DN407_18120	COG1979	alcohol dehydrogenase
DN407_18125	COG2322	membrane
DN407_18135	COG1113	amino acid transport
DN407_18150	COG1408	metallophosphoesterase
DN407_18155	COG2116	formate transmembrane transporter activity
DN407_18170	COG2217	Heavy metal translocating P-type atpase
DN407_18175	COG2608	mercury ion transmembrane transporter activity
DN407_18180	COG1937	Protein conserved in bacteria
DN407_18190	COG2819	hydrolase of the alpha beta superfamily
DN407_18195	COG1120	ATPase activity
DN407_18200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_18205	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_18210	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_18220	COG2169	Transcriptional regulator
DN407_18225	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DN407_18230	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DN407_18255	COG3300	MHYT domain
DN407_18255	COG5001	Diguanylate cyclase
DN407_18275	COG1086	Polysaccharide biosynthesis protein
DN407_18295	COG1346	cytolysis
DN407_18305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_18315	COG2188	Transcriptional regulator
DN407_18320	COG2723	6-phospho-beta-galactosidase activity
DN407_18330	COG1404	Belongs to the peptidase S8 family
DN407_18335	COG3773	Cell wall hydrolase
DN407_18350	COG1368	sulfuric ester hydrolase activity
DN407_18355	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
DN407_18380	COG4550	Control of competence regulator ComK, YlbF/YmcA
DN407_18390	COG1013	pyruvate-flavodoxin oxidoreductase activity
DN407_18395	COG0674	pyruvate-flavodoxin oxidoreductase activity
DN407_18395	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DN407_18405	COG2359	stage V sporulation protein S
DN407_18410	COG1692	metallophosphoesterase
DN407_18430	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DN407_18435	COG1426	Protein conserved in bacteria
DN407_18450	COG0300	oxidoreductase activity
DN407_18455	COG0612	Peptidase, M16
DN407_18460	COG0612	Peptidase, M16
DN407_18485	COG2188	Transcriptional regulator
DN407_18505	COG0740	serine-type endopeptidase activity
DN407_18510	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DN407_18520	COG0527	aspartate kinase activity
DN407_18525	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DN407_18530	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DN407_18665	COG1278	Cold shock
DN407_18675	COG0582	viral genome integration into host DNA
DN407_18710	COG0305	Participates in initiation and elongation during chromosome replication
DN407_18790	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DN407_18795	COG1873	PFAM PRC-barrel domain
DN407_18800	COG0612	Peptidase, M16
DN407_18805	COG0726	polysaccharide deacetylase
DN407_18820	COG0196	riboflavin kinase activity
DN407_18835	COG1550	Protein conserved in bacteria
DN407_18845	COG1358	cellular component organization or biogenesis
DN407_18850	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DN407_18855	COG0195	Participates in both transcription termination and antitermination
DN407_18875	COG0750	zinc metalloprotease
DN407_18885	COG4589	Belongs to the CDS family
DN407_18930	COG4974	Belongs to the 'phage' integrase family
DN407_18940	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DN407_18945	COG0758	DNA mediated transformation
DN407_18950	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DN407_18990	COG1837	Belongs to the UPF0109 family
DN407_19000	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DN407_19010	COG0552	protein localization to endoplasmic reticulum
DN407_19015	COG1196	nuclear chromosome segregation
DN407_19030	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_19035	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DN407_19050	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DN407_19055	COG1461	Dihydroxyacetone kinase
DN407_19060	COG1302	Protein conserved in bacteria
DN407_19075	COG1564	THIamine pyrophosphokinase
DN407_19080	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DN407_19090	COG0515	serine threonine protein kinase
DN407_19090	COG2815	serine threonine protein kinase
DN407_19095	COG0631	protein serine/threonine phosphatase activity
DN407_19105	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DN407_19105	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DN407_19120	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DN407_19125	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DN407_19145	COG1561	YicC-like family, N-terminal region
DN407_19150	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DN407_19165	COG0006	proline dipeptidase activity
DN407_19180	COG3069	C4-dicarboxylate transmembrane transporter activity
DN407_19190	COG0546	phosphoglycolate phosphatase activity
DN407_19245	COG0564	pseudouridine synthase activity
DN407_19265	COG3599	regulation of cell shape
DN407_19270	COG2302	S4 RNA-binding domain
DN407_19275	COG0762	integral membrane protein
DN407_19285	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DN407_19295	COG1873	PFAM PRC-barrel domain
DN407_19300	COG1191	sigma factor activity
DN407_19305	COG1191	sigma factor activity
DN407_19315	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DN407_19320	COG0849	cell division
DN407_19340	COG0772	Belongs to the SEDS family
DN407_19360	COG0768	penicillin binding
DN407_19385	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DN407_19405	COG1399	metal-binding, possibly nucleic acid-binding protein
DN407_19415	COG3480	Lon protease (S16) C-terminal proteolytic domain
DN407_19420	COG1752	Esterase of the alpha-beta hydrolase superfamily
DN407_19425	COG3314	Sporulation integral membrane protein YlbJ
DN407_19435	COG0742	ribosomal rna small subunit methyltransferase
DN407_19450	COG3679	Belongs to the UPF0342 family
DN407_19455	COG0406	alpha-ribazole phosphatase activity
DN407_19470	COG2340	Cysteine-rich secretory protein family
DN407_19485	COG3336	cytochrome c oxidase
DN407_19520	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DN407_19530	COG0772	Belongs to the SEDS family
DN407_19540	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DN407_19545	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DN407_19555	COG4896	Protein conserved in bacteria
DN407_19580	COG0483	inositol monophosphate 1-phosphatase activity
DN407_19600	COG1982	Orn Lys Arg decarboxylase major
DN407_19650	COG0022	dehydrogenase e1 component
DN407_19655	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DN407_19670	COG0561	phosphatase activity
DN407_19685	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DN407_19690	COG0569	domain protein
DN407_19710	COG0583	DNA-binding transcription factor activity
DN407_19715	COG0517	IMP dehydrogenase activity
DN407_19725	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
DN407_19730	COG4703	Protein of unknown function (DUF1797)
DN407_19745	COG2200	EAL domain
DN407_19750	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_19755	COG1408	metallophosphoesterase
DN407_19800	COG2814	Major facilitator Superfamily
DN407_19825	COG3209	COG3209 Rhs family protein
DN407_19835	COG2205	protein histidine kinase activity
DN407_19845	COG0436	Aminotransferase
DN407_19850	COG1609	Transcriptional regulator
DN407_19855	COG3833	ABC-type maltose transport systems, permease component
DN407_19860	COG1175	transmembrane transport
DN407_19865	COG2182	Extracellular solute-binding protein
DN407_19875	COG0366	Alpha amylase catalytic
DN407_19880	COG3842	ATPase activity
DN407_19920	COG0183	Belongs to the thiolase family
DN407_19955	COG1695	Transcriptional regulator
DN407_19960	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_19980	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DN407_19985	COG0436	Aminotransferase
DN407_20020	COG2084	Dehydrogenase
DN407_20030	COG2199	diguanylate cyclase activity
DN407_20030	COG2203	Gaf domain
DN407_20035	COG0778	Nitroreductase
DN407_20060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DN407_20060	COG2190	(PTS) system
DN407_20060	COG1263	PTS System
DN407_20065	COG3711	transcriptional antiterminator
DN407_20085	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DN407_20115	COG1547	Domain of unknown function (DUF309)
DN407_20120	COG0456	acetyltransferase
DN407_20125	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DN407_20130	COG4086	secreted protein
DN407_20135	COG0561	phosphatase activity
DN407_20140	COG0697	spore germination
DN407_20155	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DN407_20180	COG0733	neurotransmitter:sodium symporter activity
DN407_20200	COG1686	Belongs to the peptidase S11 family
DN407_20210	COG1725	Transcriptional regulator
DN407_20215	COG1131	(ABC) transporter
DN407_20230	COG1846	Transcriptional regulator
DN407_20245	COG0598	Magnesium transport protein CorA
DN407_20270	COG4974	Belongs to the 'phage' integrase family
DN407_20280	COG0735	belongs to the Fur family
DN407_20285	COG1300	Membrane
DN407_20305	COG0667	Aldo Keto reductase
DN407_20310	COG0656	L-ascorbic acid biosynthetic process
DN407_20315	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DN407_20315	COG0456	acetyltransferase
DN407_20325	COG0737	Belongs to the 5'-nucleotidase family
DN407_20325	COG4085	toxin activity
DN407_20325	COG1525	nuclease
DN407_20335	COG0596	Alpha beta hydrolase
DN407_20340	COG2056	Na+-H+ antiporter family
DN407_20345	COG1609	Transcriptional regulator
DN407_20350	COG0456	acetyltransferase
DN407_20355	COG1073	alpha beta
DN407_20375	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_20375	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DN407_20380	COG0307	riboflavin synthase, alpha
DN407_20410	COG2226	methyltransferase
DN407_20410	COG1073	alpha beta
DN407_20425	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DN407_20440	COG0737	Belongs to the 5'-nucleotidase family
DN407_20450	COG1522	sequence-specific DNA binding
DN407_20495	COG0300	oxidoreductase activity
DN407_20500	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_20505	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_20510	COG1760	l-serine dehydratase
DN407_20515	COG1760	l-serine dehydratase
DN407_20545	COG1285	pathogenesis
DN407_20555	COG2195	Cleaves the N-terminal amino acid of tripeptides
DN407_20560	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_20570	COG1376	ErfK ybiS ycfS ynhG family protein
DN407_20575	COG4129	membrane
DN407_20580	COG1126	abc transporter atp-binding protein
DN407_20585	COG0765	amino acid transport
DN407_20590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DN407_20610	COG2323	membrane
DN407_20615	COG0772	Belongs to the SEDS family
DN407_20620	COG0508	dehydrogenase complex catalyzes the overall conversion of
DN407_20625	COG0022	dehydrogenase e1 component
DN407_20630	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DN407_20635	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DN407_20645	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DN407_20650	COG0280	phosphate acetyltransferase
DN407_20660	COG3290	protein histidine kinase activity
DN407_20660	COG3829	transcription factor binding
DN407_20670	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_20675	COG3093	addiction module antidote protein HigA
DN407_20695	COG0750	zinc metalloprotease
DN407_20700	COG0497	DNA recombination
DN407_20710	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DN407_20720	COG0142	geranyltranstransferase activity
DN407_20745	COG1302	Protein conserved in bacteria
DN407_20750	COG0439	Biotin carboxylase
DN407_20755	COG0511	ligase activity, forming carbon-carbon bonds
DN407_20800	COG3854	ATPases associated with a variety of cellular activities
DN407_20825	COG0006	proline dipeptidase activity
DN407_20840	COG3872	metal-dependent enzyme
DN407_20850	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DN407_20885	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_20895	COG1609	Transcriptional regulator
DN407_20905	COG2076	Multidrug Resistance protein
DN407_20910	COG2076	Multidrug Resistance protein
DN407_20940	COG1131	(ABC) transporter
DN407_20945	COG1725	Transcriptional regulator
DN407_20980	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DN407_21045	COG1459	type II secretion system
DN407_21050	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DN407_21105	COG1410	methionine synthase
DN407_21105	COG0646	methionine synthase
DN407_21110	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DN407_21110	COG0646	methionine synthase
DN407_21115	COG0626	cystathionine gamma-synthase activity
DN407_21120	COG0626	cystathionine gamma-synthase activity
DN407_21140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_21150	COG1940	carbohydrate kinase activity
DN407_21155	COG4483	Protein conserved in bacteria
DN407_21160	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DN407_21170	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
DN407_21175	COG0704	Plays a role in the regulation of phosphate uptake
DN407_21185	COG0573	inorganic phosphate transmembrane transporter activity
DN407_21190	COG0573	inorganic phosphate transmembrane transporter activity
DN407_21205	COG0477	Major facilitator Superfamily
DN407_21210	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DN407_21220	COG5521	maltodextrose utilization protein MalA
DN407_21235	COG0735	belongs to the Fur family
DN407_21240	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DN407_21245	COG1121	(ABC) transporter
DN407_21250	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_21280	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DN407_21285	COG2384	SAM-dependent methyltransferase
DN407_21295	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DN407_21300	COG0358	DNA primase activity
DN407_21310	COG0517	IMP dehydrogenase activity
DN407_21325	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DN407_21330	COG0295	cytidine deaminase activity
DN407_21335	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DN407_21345	COG1480	7TM receptor with intracellular HD hydrolase
DN407_21350	COG1702	phosphate starvation-inducible protein PhoH
DN407_21370	COG1610	YqeY-like protein
DN407_21385	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DN407_21390	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DN407_21420	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DN407_21425	COG1733	regulation of RNA biosynthetic process
DN407_21450	COG1466	dna polymerase III delta subunit
DN407_21460	COG2333	competence protein COMEC
DN407_21460	COG0658	competence protein
DN407_21465	COG2131	deaminase
DN407_21470	COG1596	polysaccharide export
DN407_21470	COG1555	photosystem II stabilization
DN407_21475	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DN407_21480	COG2226	methyltransferase
DN407_21485	COG0799	negative regulation of ribosome biogenesis
DN407_21490	COG1713	HD superfamily hydrolase involved in NAD metabolism
DN407_21500	COG1534	Rna-binding protein
DN407_21510	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DN407_21515	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DN407_21530	COG1191	sigma factor activity
DN407_21540	COG1595	DNA-templated transcription, initiation
DN407_21550	COG0778	Nitroreductase
DN407_21555	COG2357	RelA SpoT domain protein
DN407_21565	COG1785	Belongs to the alkaline phosphatase family
DN407_21575	COG2267	carboxylic ester hydrolase activity
DN407_21615	COG3186	Phenylalanine-4-hydroxylase
DN407_21625	COG2514	catechol 2,3-dioxygenase activity
DN407_21630	COG2259	Doxx family
DN407_21670	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_21685	COG1454	alcohol dehydrogenase
DN407_21685	COG1012	belongs to the aldehyde dehydrogenase family
DN407_21690	COG0626	cystathionine gamma-synthase activity
DN407_21695	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DN407_21720	COG0768	penicillin binding
DN407_21755	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DN407_21785	COG0628	permease
DN407_21805	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DN407_21820	COG1104	cysteine desulfurase activity
DN407_21825	COG1959	2 iron, 2 sulfur cluster binding
DN407_21830	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DN407_21845	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DN407_21870	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DN407_21880	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DN407_21880	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DN407_21885	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DN407_21890	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DN407_21890	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DN407_21900	COG2244	polysaccharide biosynthetic process
DN407_21905	COG2323	membrane
DN407_21915	COG1862	Preprotein translocase
DN407_21945	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DN407_21975	COG0157	Belongs to the NadC ModD family
DN407_21980	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DN407_21985	COG1104	cysteine desulfurase activity
DN407_21990	COG1827	regulation of RNA biosynthetic process
DN407_21995	COG2258	MOSC domain
DN407_22010	COG0077	Prephenate dehydratase
DN407_22015	COG0577	efflux transmembrane transporter activity
DN407_22020	COG0577	efflux transmembrane transporter activity
DN407_22025	COG1136	(ABC) transporter
DN407_22030	COG5002	protein histidine kinase activity
DN407_22035	COG0745	RESPONSE REGULATOR receiver
DN407_22045	COG3290	protein histidine kinase activity
DN407_22060	COG1530	ribonuclease E activity
DN407_22065	COG1994	Peptidase M50
DN407_22070	COG0739	heme binding
DN407_22075	COG2894	cell division
DN407_22090	COG1792	Involved in formation and maintenance of cell shape
DN407_22095	COG1077	Cell shape determining protein MreB Mrl
DN407_22115	COG0285	dihydrofolate synthase activity
DN407_22135	COG1388	LysM domain
DN407_22145	COG0113	porphobilinogen synthase activity
DN407_22150	COG1587	Uroporphyrinogen-III synthase
DN407_22160	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DN407_22170	COG1846	Transcriptional regulator
DN407_22175	COG1764	response to oxidative stress
DN407_22190	COG1067	ATP-dependent peptidase activity
DN407_22190	COG0470	DNA polymerase III
DN407_22235	COG0622	Phosphoesterase
DN407_22240	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DN407_22250	COG5401	PFAM Sporulation and spore germination
DN407_22265	COG2197	response regulator
DN407_22270	COG2233	PERMEase
DN407_22275	COG0402	S-adenosylhomocysteine deaminase activity
DN407_22280	COG1983	PspC domain protein
DN407_22285	COG1396	sequence-specific DNA binding
DN407_22290	COG0697	spore germination
DN407_22300	COG1959	2 iron, 2 sulfur cluster binding
DN407_22305	COG1668	transmembrane transport
DN407_22310	COG4152	abc transporter atp-binding protein
DN407_22315	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DN407_22320	COG1360	Flagellar Motor Protein
DN407_22325	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DN407_22330	COG1876	peptidase activity
DN407_22335	COG0824	Thioesterase
DN407_22340	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DN407_22345	COG1053	succinate dehydrogenase
DN407_22350	COG2009	succinate dehydrogenase
DN407_22355	COG1719	4-vinyl reductase, 4VR
DN407_22365	COG3118	belongs to the thioredoxin family
DN407_22370	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
DN407_22375	COG2086	electron transfer activity
DN407_22380	COG1024	Enoyl-CoA hydratase
DN407_22385	COG1309	transcriptional regulator
DN407_22390	COG0318	PFAM AMP-dependent synthetase and ligase
DN407_22415	COG2318	DinB family
DN407_22440	COG1131	(ABC) transporter
DN407_22445	COG2205	protein histidine kinase activity
DN407_22450	COG0745	RESPONSE REGULATOR receiver
DN407_22455	COG4895	conserved protein (DUF2196)
DN407_22460	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DN407_22470	COG4509	Sortase family
DN407_22475	COG1120	ATPase activity
DN407_22490	COG5386	Cell surface protein
DN407_22500	COG5386	Cell surface protein
DN407_22505	COG1114	Component of the transport system for branched-chain amino acids
DN407_22510	COG1187	pseudouridine synthase activity
DN407_22520	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DN407_22520	COG1796	DNA polymerase
DN407_22525	COG1286	toxin biosynthetic process
DN407_22570	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DN407_22580	COG1418	mRNA catabolic process
DN407_22600	COG2814	Major facilitator Superfamily
DN407_22605	COG1566	PFAM secretion protein HlyD family protein
DN407_22610	COG1309	transcriptional regulator
DN407_22615	COG1363	Peptidase, m42
DN407_22640	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DN407_22655	COG1484	DNA-dependent DNA replication
DN407_22660	COG3611	Membrane attachment protein
DN407_22670	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
DN407_22675	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DN407_22685	COG1971	Probably functions as a manganese efflux pump
DN407_22695	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DN407_22695	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DN407_22700	COG5002	protein histidine kinase activity
DN407_22705	COG0745	RESPONSE REGULATOR receiver
DN407_22725	COG0538	isocitrate dehydrogenase activity
DN407_22730	COG0372	Belongs to the citrate synthase family
DN407_22745	COG0628	permease
DN407_22750	COG3030	protein affecting phage T7 exclusion by the F plasmid
DN407_22775	COG1725	Transcriptional regulator
DN407_22780	COG0281	malic enzyme
DN407_22785	COG0587	DNA-directed DNA polymerase activity
DN407_22800	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DN407_22815	COG4109	DRTGG domain
DN407_22825	COG0006	proline dipeptidase activity
DN407_22870	COG0662	Cupin 2, conserved barrel domain protein
DN407_22885	COG1028	Short-chain dehydrogenase reductase Sdr
DN407_22890	COG0589	response to stress
DN407_22925	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_22950	COG0827	DNA restriction-modification system
DN407_22955	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DN407_22960	COG3874	Sporulation protein YtfJ
DN407_22975	COG1574	metal-dependent hydrolase with the TIM-barrel fold
DN407_22985	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DN407_23000	COG1104	cysteine desulfurase activity
DN407_23010	COG0583	DNA-binding transcription factor activity
DN407_23015	COG0697	spore germination
DN407_23020	COG1309	transcriptional regulator
DN407_23025	COG1956	GAF domain-containing protein
DN407_23030	COG0626	cystathionine gamma-synthase activity
DN407_23085	COG1595	DNA-templated transcription, initiation
DN407_23095	COG0110	maltose O-acetyltransferase activity
DN407_23100	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DN407_23105	COG0454	-acetyltransferase
DN407_23110	COG0517	IMP dehydrogenase activity
DN407_23115	COG0123	including yeast histone deacetylase and acetoin utilization protein
DN407_23130	COG0745	RESPONSE REGULATOR receiver
DN407_23135	COG5002	protein histidine kinase activity
DN407_23140	COG0666	response to abiotic stimulus
DN407_23145	COG2972	Histidine kinase
DN407_23145	COG0745	RESPONSE REGULATOR receiver
DN407_23165	COG3279	Response regulator of the LytR AlgR family
DN407_23190	COG1609	Transcriptional regulator
DN407_23195	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DN407_23195	COG1605	Chorismate mutase
DN407_23200	COG4851	CamS sex pheromone cAM373 precursor
DN407_23205	COG3118	belongs to the thioredoxin family
DN407_23215	COG2309	aminopeptidase activity
DN407_23230	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_23245	COG1674	ftsk spoiiie
DN407_23250	COG1388	LysM domain
DN407_23250	COG0860	N-Acetylmuramoyl-L-alanine amidase
DN407_23260	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DN407_23270	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_23275	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
DN407_23280	COG1363	Peptidase, m42
DN407_23290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_23305	COG0510	thiamine kinase activity
DN407_23310	COG1523	belongs to the glycosyl hydrolase 13 family
DN407_23320	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DN407_23325	COG1349	DNA-binding transcription factor activity
DN407_23330	COG1187	pseudouridine synthase activity
DN407_23335	COG2244	polysaccharide biosynthetic process
DN407_23340	COG2081	HI0933 family
DN407_23345	COG2814	Major facilitator Superfamily
DN407_23355	COG3832	glyoxalase III activity
DN407_23375	COG1329	Transcriptional regulator
DN407_23400	COG0314	molybdopterin synthase activity
DN407_23405	COG1763	Mo-molybdopterin cofactor biosynthetic process
DN407_23410	COG0303	'Molybdopterin
DN407_23420	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DN407_23425	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DN407_23450	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DN407_23460	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DN407_23505	COG2814	Major facilitator Superfamily
DN407_23510	COG0475	glutathione-regulated potassium exporter activity
DN407_23515	COG0490	domain, Protein
DN407_23520	COG0582	viral genome integration into host DNA
DN407_23535	COG1136	(ABC) transporter
DN407_23555	COG1242	4 iron, 4 sulfur cluster binding
DN407_23560	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DN407_23570	COG1131	(ABC) transporter
DN407_23580	COG1794	racemase activity, acting on amino acids and derivatives
DN407_23600	COG2267	carboxylic ester hydrolase activity
DN407_23605	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DN407_23610	COG0671	phosphoesterase, PA-phosphatase related
DN407_23615	COG0438	transferase activity, transferring glycosyl groups
DN407_23640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_23680	COG5002	protein histidine kinase activity
DN407_23685	COG3852	Histidine kinase
DN407_23690	COG2267	carboxylic ester hydrolase activity
DN407_23695	COG1368	sulfuric ester hydrolase activity
DN407_23720	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DN407_23725	COG1116	anion transmembrane transporter activity
DN407_23730	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DN407_23755	COG0494	nUDIX hydrolase
DN407_23800	COG0288	reversible hydration of carbon dioxide
DN407_23805	COG1271	oxidase subunit
DN407_23810	COG1294	oxidase, subunit
DN407_23825	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_23845	COG1842	Phage shock protein A
DN407_23875	COG5002	protein histidine kinase activity
DN407_23880	COG0745	RESPONSE REGULATOR receiver
DN407_23910	COG1597	lipid kinase activity
DN407_23940	COG0586	Pfam SNARE associated Golgi protein
DN407_23950	COG0577	efflux transmembrane transporter activity
DN407_23955	COG1136	(ABC) transporter
DN407_23960	COG2207	Transcriptional regulator
DN407_23960	COG3708	Transcriptional regulator
DN407_23980	COG5658	integral membrane protein
DN407_23985	COG0640	Transcriptional regulator
DN407_23990	COG0745	RESPONSE REGULATOR receiver
DN407_23995	COG2205	protein histidine kinase activity
DN407_24000	COG0577	efflux transmembrane transporter activity
DN407_24005	COG0577	efflux transmembrane transporter activity
DN407_24010	COG1136	(ABC) transporter
DN407_24015	COG0577	efflux transmembrane transporter activity
DN407_24060	COG3964	amidohydrolase
DN407_24080	COG4948	Mandelate Racemase Muconate Lactonizing
DN407_24090	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DN407_24095	COG0596	Alpha beta hydrolase
DN407_24105	COG1169	isochorismate synthase
DN407_24110	COG1575	Belongs to the MenA family. Type 1 subfamily
DN407_24115	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DN407_24120	COG1278	Cold shock
DN407_24135	COG0058	SHG alpha-glucan phosphorylase activity
DN407_24145	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DN407_24175	COG0039	L-malate dehydrogenase activity
DN407_24270	COG0544	peptidyl-prolyl cis-trans isomerase activity
DN407_24305	COG1285	pathogenesis
DN407_24310	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DN407_24330	COG2155	Conserved Protein
DN407_24335	COG1098	S1 RNA binding domain
DN407_24340	COG0436	Aminotransferase
DN407_24345	COG1522	sequence-specific DNA binding
DN407_24350	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DN407_24355	COG2267	carboxylic ester hydrolase activity
DN407_24365	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DN407_24380	COG5018	Exonuclease
DN407_24385	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DN407_24400	COG0423	glycine-tRNA ligase activity
DN407_24405	COG2050	protein possibly involved in aromatic compounds catabolism
DN407_24415	COG1268	BioY protein
DN407_24420	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DN407_24425	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DN407_24440	COG3584	3D domain protein
DN407_24455	COG1252	NADH dehydrogenase
DN407_24470	COG3708	Transcriptional regulator
DN407_24485	COG1683	Conserved Protein
DN407_24500	COG0316	Belongs to the HesB IscA family
DN407_24515	COG1252	NADH dehydrogenase
DN407_24525	COG2274	protein secretion by the type I secretion system
DN407_24530	COG0390	transport system, permease component
DN407_24535	COG2824	Alkylphosphonate utilization operon protein PhnA
DN407_24560	COG4837	Protein of unknown function (DUF1462)
DN407_24565	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DN407_24575	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_24580	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DN407_24600	COG1358	cellular component organization or biogenesis
DN407_24615	COG2249	NAD(P)H dehydrogenase (quinone) activity
DN407_24620	COG0647	UMP catabolic process
DN407_24630	COG2445	Protein of unknown function DUF86
DN407_24635	COG1494	fructose-1,6-bisphosphatase
DN407_24650	COG4470	Protein conserved in bacteria
DN407_24660	COG0789	Transcriptional regulator
DN407_24665	COG4377	Putative membrane peptidase family (DUF2324)
DN407_24690	COG0739	heme binding
DN407_24700	COG3377	Domain of unknown function (DUF1805)
DN407_24705	COG0737	Belongs to the 5'-nucleotidase family
DN407_24715	COG0719	Fe-S assembly protein
DN407_24720	COG0822	iron-sulfur transferase activity
DN407_24725	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DN407_24730	COG0719	Fe-S assembly protein
DN407_24735	COG0396	ATPase activity
DN407_24740	COG1464	Belongs to the NlpA lipoprotein family
DN407_24745	COG1464	Belongs to the NlpA lipoprotein family
DN407_24750	COG2011	ABC-type metal ion transport system permease component
DN407_24765	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DN407_24770	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DN407_24780	COG1393	Belongs to the ArsC family
DN407_24800	COG0039	L-malate dehydrogenase activity
DN407_24820	COG1309	transcriptional regulator
DN407_24825	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DN407_24830	COG1960	acyl-CoA dehydrogenase activity
DN407_24835	COG0183	Belongs to the thiolase family
DN407_24840	COG1250	3-hydroxyacyl-CoA dehydrogenase
DN407_24840	COG1024	Enoyl-CoA hydratase
DN407_24850	COG1686	Belongs to the peptidase S11 family
DN407_24865	COG0011	TIGRFAM Protein of
DN407_24870	COG0840	transmembrane signaling receptor activity
DN407_24885	COG2814	Major facilitator Superfamily
DN407_24890	COG0531	amino acid
DN407_24910	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_24950	COG0586	Pfam SNARE associated Golgi protein
DN407_24960	COG1376	ErfK ybiS ycfS ynhG family protein
DN407_24965	COG0745	RESPONSE REGULATOR receiver
DN407_24970	COG5002	protein histidine kinase activity
DN407_25000	COG0840	transmembrane signaling receptor activity
DN407_25005	COG2151	metal-sulfur cluster biosynthetic enzyme
DN407_25010	COG3227	Zinc metalloprotease (Elastase)
DN407_25015	COG1741	Belongs to the pirin family
DN407_25030	COG0586	Pfam SNARE associated Golgi protein
DN407_25035	COG0475	glutathione-regulated potassium exporter activity
DN407_25040	COG0490	domain, Protein
DN407_25045	COG1115	amino acid carrier protein
DN407_25050	COG0783	Belongs to the Dps family
DN407_25065	COG1611	Belongs to the LOG family
DN407_25075	COG1528	Iron-storage protein
DN407_25080	COG2311	Membrane
DN407_25085	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_25090	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_25095	COG1115	amino acid carrier protein
DN407_25100	COG1115	amino acid carrier protein
DN407_25105	COG2910	NAD(P)H-binding
DN407_25120	COG0656	L-ascorbic acid biosynthetic process
DN407_25125	COG2814	Major facilitator Superfamily
DN407_25130	COG1733	regulation of RNA biosynthetic process
DN407_25140	COG1252	NADH dehydrogenase
DN407_25160	COG0840	transmembrane signaling receptor activity
DN407_25160	COG3290	protein histidine kinase activity
DN407_25195	COG0488	(ABC) transporter
DN407_25200	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_25205	COG3223	Belongs to the PsiE family
DN407_25245	COG0745	RESPONSE REGULATOR receiver
DN407_25265	COG0557	exoribonuclease II activity
DN407_25270	COG1647	Serine aminopeptidase, S33
DN407_25275	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DN407_25280	COG1346	cytolysis
DN407_25315	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DN407_25330	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DN407_25400	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DN407_25415	COG2323	membrane
DN407_25430	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DN407_25440	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DN407_25450	COG1051	belongs to the nudix hydrolase family
DN407_25460	COG0492	ferredoxin-NADP+ reductase activity
DN407_25465	COG0457	Tetratricopeptide repeat
DN407_25470	COG0110	maltose O-acetyltransferase activity
DN407_25490	COG1950	PFAM Membrane protein of
DN407_25500	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DN407_25505	COG0556	nucleotide-excision repair
DN407_25520	COG0789	Transcriptional regulator
DN407_25540	COG0583	DNA-binding transcription factor activity
DN407_25550	COG0655	NAD(P)H dehydrogenase (quinone) activity
DN407_25565	COG1132	(ABC) transporter
DN407_25570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_25575	COG0793	Belongs to the peptidase S41A family
DN407_25575	COG3409	Peptidoglycan-binding domain 1 protein
DN407_25580	COG2177	Part of the ABC transporter FtsEX involved in
DN407_25585	COG2884	Cell division ATP-binding protein ftsE
DN407_25615	COG1131	(ABC) transporter
DN407_25645	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DN407_25650	COG1278	Cold shock
DN407_25655	COG1040	competence protein
DN407_25660	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DN407_25665	COG0791	NLP P60 protein
DN407_25665	COG1388	LysM domain
DN407_25670	COG1733	regulation of RNA biosynthetic process
DN407_25675	COG1307	EDD domain protein, DegV family
DN407_25680	COG1739	Uncharacterized protein family UPF0029
DN407_25685	COG1316	TRANSCRIPTIONal
DN407_25690	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DN407_25695	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DN407_25700	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DN407_25710	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DN407_25710	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DN407_25730	COG1486	melibiose metabolic process
DN407_25735	COG1447	Phosphotransferase system cellobiose-specific component IIA
DN407_25740	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DN407_25750	COG1447	Phosphotransferase system cellobiose-specific component IIA
DN407_25760	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DN407_25765	COG1301	dicarboxylic acid transport
DN407_25780	COG1511	domain protein
DN407_25785	COG0583	DNA-binding transcription factor activity
DN407_25790	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DN407_25795	COG1271	oxidase subunit
DN407_25800	COG1294	oxidase, subunit
DN407_25805	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DN407_25815	COG1620	l-lactate permease
DN407_25825	COG2389	metal-binding protein
DN407_25840	COG1368	sulfuric ester hydrolase activity
DN407_25855	COG1388	LysM domain
DN407_25855	COG0791	NLP P60 protein
DN407_25860	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DN407_25870	COG1215	transferase activity, transferring glycosyl groups
DN407_25875	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DN407_25885	COG3584	3D domain protein
DN407_25885	COG1388	LysM domain
DN407_25910	COG4715	Zinc finger, swim domain protein
DN407_25915	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DN407_25945	COG1191	sigma factor activity
DN407_25955	COG0577	efflux transmembrane transporter activity
DN407_25960	COG1136	(ABC) transporter
DN407_25985	COG5002	protein histidine kinase activity
DN407_25990	COG0745	RESPONSE REGULATOR receiver
DN407_25995	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DN407_26000	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DN407_26020	COG0438	transferase activity, transferring glycosyl groups
DN407_26045	COG0438	transferase activity, transferring glycosyl groups
DN407_26045	COG0297	glycogen (starch) synthase activity
DN407_26060	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DN407_26065	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DN407_26070	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DN407_26075	COG4464	protein tyrosine phosphatase activity
DN407_26080	COG0489	protein tyrosine kinase activity
DN407_26085	COG3944	biosynthesis protein
DN407_26090	COG0489	protein tyrosine kinase activity
DN407_26105	COG1609	Transcriptional regulator
DN407_26115	COG0739	heme binding
DN407_26130	COG3279	Response regulator of the LytR AlgR family
DN407_26135	COG2385	sporulation resulting in formation of a cellular spore
DN407_26150	COG4836	Membrane
DN407_26155	COG1007	ATP synthesis coupled electron transport
DN407_26160	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DN407_26165	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DN407_26175	COG0839	Belongs to the complex I subunit 6 family
DN407_26195	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DN407_26210	COG3300	MHYT domain
DN407_26210	COG5001	Diguanylate cyclase
DN407_26260	COG0356	it plays a direct role in the translocation of protons across the membrane
DN407_26295	COG0698	ribose 5-phosphate isomerase
DN407_26310	COG2259	Doxx family
DN407_26315	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DN407_26330	COG0009	L-threonylcarbamoyladenylate synthase
DN407_26365	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DN407_26370	COG1494	fructose-1,6-bisphosphatase
DN407_26390	COG4821	SIS domain
DN407_26400	COG3343	RNA polymerase activity
DN407_26410	COG1960	acyl-CoA dehydrogenase activity
DN407_26415	COG1960	acyl-CoA dehydrogenase activity
DN407_26420	COG1250	3-hydroxyacyl-CoA dehydrogenase
DN407_26425	COG0183	Belongs to the thiolase family
DN407_26430	COG0247	lactate metabolic process
DN407_26430	COG2181	nitrate reductase activity
DN407_26435	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DN407_26445	COG3300	MHYT domain
DN407_26445	COG5001	Diguanylate cyclase
DN407_26460	COG3227	Zinc metalloprotease (Elastase)
DN407_26465	COG2197	response regulator
DN407_26470	COG4585	Histidine kinase
DN407_26475	COG0842	Transport permease protein
DN407_26480	COG1131	(ABC) transporter
DN407_26485	COG0024	Methionine aminopeptidase
DN407_26495	COG2234	aminopeptidase activity
DN407_26515	COG1595	DNA-templated transcription, initiation
DN407_26525	COG4506	Protein conserved in bacteria
DN407_26530	COG1619	proteins homologs of microcin C7 resistance protein MccF
DN407_26550	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DN407_26555	COG2814	Major facilitator Superfamily
DN407_26560	COG0789	Transcriptional regulator
DN407_26565	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_26570	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DN407_26580	COG1994	Peptidase M50
DN407_26590	COG1078	dGTPase activity
DN407_26595	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DN407_26600	COG1120	ATPase activity
DN407_26605	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_26610	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DN407_26630	COG0280	phosphate acetyltransferase
DN407_26645	COG3773	Cell wall hydrolase
DN407_26655	COG2363	Small membrane protein
DN407_26665	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DN407_26670	COG2233	PERMEase
DN407_26675	COG0561	phosphatase activity
DN407_26680	COG2814	Major facilitator Superfamily
DN407_26690	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
DN407_26695	COG1131	(ABC) transporter
DN407_26700	COG2755	lipolytic protein G-D-S-L family
DN407_26705	COG1609	Transcriptional regulator
DN407_26715	COG0460	homoserine dehydrogenase
DN407_26735	COG1011	Hydrolase
DN407_26740	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DN407_26750	COG2197	response regulator
DN407_26755	COG2203	Gaf domain
DN407_26755	COG4585	Histidine kinase
DN407_26760	COG0351	phosphomethylpyrimidine kinase
DN407_26765	COG3706	GGDEF domain
DN407_26770	COG2879	small protein
DN407_26775	COG1966	Carbon starvation protein
DN407_26780	COG3279	Response regulator of the LytR AlgR family
DN407_26785	COG0477	Major facilitator Superfamily
DN407_26800	COG0438	transferase activity, transferring glycosyl groups
DN407_26815	COG0840	transmembrane signaling receptor activity
DN407_26825	COG1607	acyl-coa hydrolase
DN407_26830	COG1216	Glycosyl transferase, family 2
DN407_26845	COG1216	Glycosyl transferase, family 2
DN407_26855	COG4485	Bacterial membrane protein, YfhO
DN407_26860	COG0463	Glycosyl transferase, family 2
DN407_26865	COG0488	(ABC) transporter
DN407_26870	COG1309	transcriptional regulator
DN407_26875	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DN407_26880	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DN407_26880	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DN407_26885	COG0628	permease
DN407_26905	COG3275	phosphorelay sensor kinase activity
DN407_26910	COG2814	Major facilitator Superfamily
DN407_26915	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DN407_26920	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
DN407_26950	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DN407_26955	COG1272	protein, Hemolysin III
DN407_26990	COG5002	protein histidine kinase activity
DN407_27005	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_27010	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DN407_27015	COG4853	Protein conserved in bacteria
DN407_27025	COG5002	protein histidine kinase activity
DN407_27030	COG0745	RESPONSE REGULATOR receiver
DN407_27060	COG0305	Participates in initiation and elongation during chromosome replication
DN407_27070	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
DN407_27075	COG4241	membrane
DN407_27095	COG0012	GTP binding
DN407_27100	COG4481	Protein conserved in bacteria
DN407_27105	COG0668	transmembrane transport
DN407_27115	COG1475	DNA binding
DN407_27120	COG1192	Involved in chromosome partitioning
DN407_27145	COG1847	R3H domain protein
DN407_27225	COG0726	polysaccharide deacetylase
DN407_27235	COG0741	lytic transglycosylase activity
DN407_27240	COG5002	protein histidine kinase activity
DN407_27245	COG0745	RESPONSE REGULATOR receiver
DN407_27255	COG3437	response regulator, receiver
DN407_27255	COG2770	Histidine kinase
DN407_27635	COG1725	Transcriptional regulator
DN407_27640	COG1131	(ABC) transporter
DN407_27655	COG1802	Transcriptional regulator
DN407_27660	COG0697	spore germination
DN407_27680	COG1278	Cold shock
DN407_27700	COG1329	Transcriptional regulator
DN407_27725	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DN407_27740	COG0406	alpha-ribazole phosphatase activity
DN407_27750	COG1846	Transcriptional regulator
DN407_27755	COG1335	isochorismatase
DN407_27760	COG0477	Major facilitator Superfamily
DN407_27770	COG0789	Transcriptional regulator
DN407_27780	COG2311	Membrane
DN407_27850	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_27885	COG3409	Peptidoglycan-binding domain 1 protein
DN407_27885	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_27925	COG0697	spore germination
DN407_27935	COG1802	Transcriptional regulator
DN407_27940	COG0697	spore germination
DN407_27955	COG2366	antibiotic biosynthetic process
DN407_27995	COG2423	ornithine cyclodeaminase activity
DN407_28015	COG3104	oligopeptide transport
DN407_28025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DN407_28080	COG1136	(ABC) transporter
DN407_28085	COG0577	efflux transmembrane transporter activity
DN407_28090	COG2002	toxin-antitoxin pair type II binding
DN407_28100	COG1923	regulation of RNA biosynthetic process
DN407_28115	COG0840	transmembrane signaling receptor activity
DN407_28135	COG2814	Major facilitator Superfamily
DN407_28140	COG1309	transcriptional regulator
DN407_28180	COG2207	Transcriptional regulator
DN407_28240	COG0640	Transcriptional regulator
DN407_28265	COG2318	DinB family
DN407_28300	COG0534	Mate efflux family protein
DN407_28305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DN407_28305	COG0723	plastoquinol--plastocyanin reductase activity
DN407_28315	COG3961	Belongs to the TPP enzyme family
DN407_28350	COG0109	protoheme IX farnesyltransferase activity
DN407_28375	COG0531	amino acid
DN407_28390	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DN407_28435	COG0457	Tetratricopeptide repeat
DN407_28460	COG0584	glycerophosphoryl diester phosphodiesterase
DN407_28465	COG1131	(ABC) transporter
DN407_28540	COG1136	(ABC) transporter
DN407_28550	COG1309	transcriptional regulator
DN407_28575	COG4974	Belongs to the 'phage' integrase family
DN407_28590	COG1073	alpha beta
DN407_28620	COG2259	Doxx family
DN407_28650	COG2814	Major facilitator Superfamily
DN407_28675	COG1136	(ABC) transporter
DN407_28685	COG0745	RESPONSE REGULATOR receiver
DN407_28690	COG3850	Histidine kinase
DN407_28690	COG5002	protein histidine kinase activity
DN407_28720	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_28720	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DN407_28820	COG3773	Cell wall hydrolase
DN407_28855	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DN407_28860	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
DN407_28865	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DN407_28870	COG0438	transferase activity, transferring glycosyl groups
DN407_28890	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_28895	COG0438	transferase activity, transferring glycosyl groups
DN407_28900	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DN407_29095	COG2814	Major facilitator Superfamily
DN407_29105	COG1960	acyl-CoA dehydrogenase activity
DN407_29115	COG0367	asparagine synthase
DN407_29195	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DN407_29210	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DN407_29250	COG1846	Transcriptional regulator
DN407_29275	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DN407_29305	COG0582	viral genome integration into host DNA
DN407_29350	COG1136	(ABC) transporter
DN407_29395	COG0457	Tetratricopeptide repeat
DN407_29455	COG1216	Glycosyl transferase, family 2
DN407_29460	COG1024	Enoyl-CoA hydratase
DN407_29475	COG1396	sequence-specific DNA binding
DN407_29530	COG1396	sequence-specific DNA binding
DN407_29540	COG2815	serine threonine protein kinase
DN407_29540	COG0515	serine threonine protein kinase
DN407_29590	COG0582	viral genome integration into host DNA
DN407_29620	COG0457	Tetratricopeptide repeat
DN407_29645	COG0457	Tetratricopeptide repeat
DN407_29680	COG1063	alcohol dehydrogenase
DN407_29705	COG0531	amino acid
DN407_29715	COG0697	spore germination
DN407_29720	COG0814	amino acid
DN407_29745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DN407_29750	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DN407_29755	COG1522	sequence-specific DNA binding
DN407_29760	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DN407_29815	COG0367	asparagine synthase
DN407_29820	COG1309	transcriptional regulator
DN407_29860	COG0726	polysaccharide deacetylase
DN407_30005	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_30020	COG1388	LysM domain
DN407_30020	COG3409	Peptidoglycan-binding domain 1 protein
DN407_30020	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_30025	COG0739	heme binding
DN407_30060	COG5634	Uncharacterized conserved protein (DUF2278)
DN407_30085	COG0463	Glycosyl transferase, family 2
DN407_30120	COG0542	response to heat
DN407_30135	COG0457	Tetratricopeptide repeat
DN407_30230	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DN407_30240	COG2801	Transposase and inactivated derivatives
DN407_30340	COG1136	(ABC) transporter
DN407_30430	COG1136	(ABC) transporter
DN407_30460	COG1131	(ABC) transporter
DN407_30505	COG0531	amino acid
DN407_30515	COG0351	phosphomethylpyrimidine kinase
DN407_30525	COG4496	protein, YerC YecD
DN407_30545	COG3344	reverse transcriptase
DN407_30600	COG3344	reverse transcriptase
DN407_30710	COG0772	Belongs to the SEDS family
DN407_30715	COG2239	Acts as a magnesium transporter
DN407_30750	COG0772	Belongs to the SEDS family
DN407_30770	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DN407_30815	COG0745	RESPONSE REGULATOR receiver
DN407_30820	COG5002	protein histidine kinase activity
DN407_30845	COG0531	amino acid
DN407_30860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DN407_30870	COG4974	Belongs to the 'phage' integrase family
DN407_30885	COG5632	N-Acetylmuramoyl-L-alanine amidase
DN407_30885	COG3409	Peptidoglycan-binding domain 1 protein
DN407_30905	COG0457	Tetratricopeptide repeat
DN407_30985	COG0531	amino acid
DN407_31000	COG0531	amino acid
DN407_31050	COG4824	toxin secretion phage lysis holin
DN407_31060	COG2239	Acts as a magnesium transporter
DN407_31075	COG0726	polysaccharide deacetylase
DN407_31080	COG3223	Belongs to the PsiE family
DN407_31090	COG1914	H( )-stimulated, divalent metal cation uptake system
DN407_31095	COG0745	RESPONSE REGULATOR receiver
DN407_31135	COG2801	Transposase and inactivated derivatives
DN407_31165	COG3344	reverse transcriptase
DN407_31250	COG0523	cobalamin synthesis protein
DN407_31265	COG0803	Belongs to the bacterial solute-binding protein 9 family
DN407_31270	COG1121	(ABC) transporter
DN407_31275	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DN407_31290	COG2801	Transposase and inactivated derivatives
DN407_31295	COG2801	Transposase and inactivated derivatives
DN407_31310	COG3757	hydrolase, family 25
DN407_31310	COG3409	Peptidoglycan-binding domain 1 protein
DN407_31325	COG1686	Belongs to the peptidase S11 family
DN407_31335	COG2002	toxin-antitoxin pair type II binding
DN407_31355	COG1842	Phage shock protein A
DN407_31415	COG0726	polysaccharide deacetylase
DN407_31570	COG3177	Filamentation induced by cAMP protein fic