locus-tag class description FFE90_000005 PF11638 DnaA N-terminal domain FFE90_000005 PF08299 Bacterial dnaA protein helix-turn-helix FFE90_000005 PF00308 Bacterial dnaA protein FFE90_000010 PF02767 DNA polymerase III beta subunit, central domain FFE90_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain FFE90_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain FFE90_000020 PF02463 RecF/RecN/SMC N terminal domain FFE90_000025 PF04025 Domain of unknown function (DUF370) FFE90_000030 PF00204 DNA gyrase B FFE90_000030 PF00986 DNA gyrase B subunit, carboxyl terminus FFE90_000030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_000030 PF01751 Toprim domain FFE90_000035 PF00521 DNA gyrase/topoisomerase IV, subunit A FFE90_000035 PF03989 DNA gyrase C-terminal domain, beta-propeller FFE90_000065 PF14175 YaaC-like Protein FFE90_000070 PF00571 CBS domain FFE90_000070 PF00478 IMP dehydrogenase / GMP reductase domain FFE90_000075 PF07943 Penicillin-binding protein 5, C-terminal domain FFE90_000075 PF00768 D-alanyl-D-alanine carboxypeptidase FFE90_000080 PF01680 SOR/SNZ family FFE90_000085 PF01174 SNO glutamine amidotransferase family FFE90_000090 PF02403 Seryl-tRNA synthetase N-terminal domain FFE90_000090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFE90_000100 PF01712 Deoxynucleoside kinase FFE90_000105 PF01712 Deoxynucleoside kinase FFE90_000110 PF00704 Glycosyl hydrolases family 18 FFE90_000110 PF01476 LysM domain FFE90_000115 PF00857 Isochorismatase family FFE90_000120 PF14437 MafB19-like deaminase FFE90_000130 PF12169 DNA polymerase III subunits gamma and tau domain III FFE90_000135 PF02575 YbaB/EbfC DNA-binding family FFE90_000140 PF02132 RecR protein FFE90_000140 PF13662 Toprim domain FFE90_000145 PF10704 Protein of unknown function (DUF2508) FFE90_000150 PF07441 SigmaK-factor processing regulatory protein BofA FFE90_000180 PF10764 Inhibitor of sigma-G Gin FFE90_000185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein FFE90_000190 PF05816 Toxic anion resistance protein (TelA) FFE90_000195 PF01276 Orn/Lys/Arg decarboxylase, major domain FFE90_000195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FFE90_000200 PF02223 Thymidylate kinase FFE90_000205 PF06153 Cyclic-di-AMP receptor FFE90_000210 PF03885 Protein of unknown function (DUF327) FFE90_000215 PF09115 DNA polymerase III, delta subunit, C terminal FFE90_000220 PF04468 PSP1 C-terminal conserved region FFE90_000225 PF06156 Initiation control protein YabA FFE90_000230 PF05175 Methyltransferase small domain FFE90_000235 PF01541 GIY-YIG catalytic domain FFE90_000240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE90_000245 PF18277 AbrB C-terminal domain FFE90_000245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FFE90_000250 PF09334 tRNA synthetases class I (M) FFE90_000250 PF01588 Putative tRNA binding domain FFE90_000250 PF08264 Anticodon-binding domain of tRNA FFE90_000255 PF01026 TatD related DNase FFE90_000260 PF06725 3D domain FFE90_000260 PF03990 G5-linked-Ubiquitin-like domain FFE90_000260 PF07501 G5 domain FFE90_000265 PF13331 Domain of unknown function (DUF4093) FFE90_000265 PF13662 Toprim domain FFE90_000270 PF00398 Ribosomal RNA adenine dimethylase FFE90_000275 PF05582 YabG peptidase U57 FFE90_000280 PF06257 Biofilm formation stimulator VEG FFE90_000285 PF00269 Small, acid-soluble spore proteins, alpha/beta type FFE90_000290 PF08544 GHMP kinases C terminal FFE90_000290 PF00288 GHMP kinases N terminal domain FFE90_000295 PF09182 Bacterial purine repressor, N-terminal FFE90_000295 PF00156 Phosphoribosyl transferase domain FFE90_000300 PF01042 Endoribonuclease L-PSP FFE90_000305 PF04026 SpoVG FFE90_000310 PF00132 Bacterial transferase hexapeptide (six repeats) FFE90_000310 PF00483 Nucleotidyl transferase FFE90_000315 PF14572 Phosphoribosyl synthetase-associated domain FFE90_000315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FFE90_000320 PF01386 Ribosomal L25p family FFE90_000320 PF14693 Ribosomal protein TL5, C-terminal domain FFE90_000325 PF01195 Peptidyl-tRNA hydrolase FFE90_000330 PF10955 Protein of unknown function (DUF2757) FFE90_000335 PF03461 TRCF domain FFE90_000335 PF00271 Helicase conserved C-terminal domain FFE90_000335 PF02559 CarD-like/TRCF domain FFE90_000335 PF17757 UvrB interaction domain FFE90_000335 PF00270 DEAD/DEAH box helicase FFE90_000340 PF15714 Stage V sporulation protein T C-terminal, transcription factor FFE90_000340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FFE90_000345 PF14667 Polysaccharide biosynthesis C-terminal domain FFE90_000345 PF01943 Polysaccharide biosynthesis protein FFE90_000350 PF03819 MazG nucleotide pyrophosphohydrolase domain FFE90_000350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE90_000355 PF01479 S4 domain FFE90_000360 PF07873 YabP family FFE90_000365 PF09578 Spore cortex protein YabQ (Spore_YabQ) FFE90_000370 PF04977 Septum formation initiator FFE90_000375 PF00575 S1 RNA binding domain FFE90_000390 PF07228 Stage II sporulation protein E (SpoIIE) FFE90_000395 PF00092 von Willebrand factor type A domain FFE90_000400 PF00069 Protein kinase domain FFE90_000405 PF01171 PP-loop family FFE90_000405 PF09179 TilS substrate binding domain FFE90_000405 PF11734 TilS substrate C-terminal domain FFE90_000415 PF17862 AAA+ lid domain FFE90_000415 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_000415 PF01434 Peptidase family M41 FFE90_000415 PF06480 FtsH Extracellular FFE90_000420 PF03309 Type III pantothenate kinase FFE90_000425 PF01430 Hsp33 protein FFE90_000430 PF13145 PPIC-type PPIASE domain FFE90_000435 PF00291 Pyridoxal-phosphate dependent enzyme FFE90_000440 PF04715 Anthranilate synthase component I, N terminal region FFE90_000440 PF00425 chorismate binding enzyme FFE90_000445 PF00117 Glutamine amidotransferase class-I FFE90_000450 PF01063 Amino-transferase class IV FFE90_000455 PF00809 Pterin binding enzyme FFE90_000460 PF02152 Dihydroneopterin aldolase FFE90_000465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FFE90_000470 PF01381 Helix-turn-helix FFE90_000475 PF01207 Dihydrouridine synthase (Dus) FFE90_000480 PF01336 OB-fold nucleic acid binding domain FFE90_000480 PF00152 tRNA synthetases class II (D, K and N) FFE90_000560 PF05848 CtsR N-terminal HTH domain FFE90_000560 PF17727 CtsR C-terminal dimerization domain FFE90_000565 PF02151 UvrB/uvrC motif FFE90_000570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain FFE90_000575 PF07724 AAA domain (Cdc48 subfamily) FFE90_000575 PF17871 AAA lid domain FFE90_000575 PF02861 Clp amino terminal domain, pathogenicity island component FFE90_000575 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_000575 PF10431 C-terminal, D2-small domain, of ClpB protein FFE90_000580 PF18073 Rubredoxin metal binding domain FFE90_000585 PF02457 DisA bacterial checkpoint controller nucleotide-binding FFE90_000585 PF10635 DisA bacterial checkpoint controller linker region FFE90_000595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FFE90_000600 PF02542 YgbB family FFE90_000605 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFE90_000615 PF00132 Bacterial transferase hexapeptide (six repeats) FFE90_000615 PF06426 Serine acetyltransferase, N-terminal FFE90_000620 PF09190 DALR domain FFE90_000620 PF01406 tRNA synthetases class I (C) catalytic domain FFE90_000625 PF00636 Ribonuclease III domain FFE90_000630 PF00588 SpoU rRNA Methylase family FFE90_000630 PF08032 RNA 2'-O ribose methyltransferase substrate binding FFE90_000635 PF05991 YacP-like NYN domain FFE90_000640 PF08281 Sigma-70, region 4 FFE90_000640 PF04542 Sigma-70 region 2 FFE90_000645 PF00471 Ribosomal protein L33 FFE90_000650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FFE90_000655 PF02357 Transcription termination factor nusG FFE90_000655 PF00467 KOW motif FFE90_000660 PF00298 Ribosomal protein L11, RNA binding domain FFE90_000660 PF03946 Ribosomal protein L11, N-terminal domain FFE90_000665 PF00687 Ribosomal protein L1p/L10e family FFE90_000670 PF00466 Ribosomal protein L10 FFE90_000675 PF00542 Ribosomal protein L7/L12 C-terminal domain FFE90_000675 PF16320 Ribosomal protein L7/L12 dimerisation domain FFE90_000680 PF05175 Methyltransferase small domain FFE90_000685 PF10385 RNA polymerase beta subunit external 1 domain FFE90_000685 PF04561 RNA polymerase Rpb2, domain 2 FFE90_000685 PF04560 RNA polymerase Rpb2, domain 7 FFE90_000685 PF04563 RNA polymerase beta subunit FFE90_000685 PF04565 RNA polymerase Rpb2, domain 3 FFE90_000685 PF00562 RNA polymerase Rpb2, domain 6 FFE90_000690 PF04998 RNA polymerase Rpb1, domain 5 FFE90_000690 PF05000 RNA polymerase Rpb1, domain 4 FFE90_000690 PF04983 RNA polymerase Rpb1, domain 3 FFE90_000690 PF00623 RNA polymerase Rpb1, domain 2 FFE90_000690 PF04997 RNA polymerase Rpb1, domain 1 FFE90_000695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FFE90_000700 PF00164 Ribosomal protein S12/S23 FFE90_000705 PF00177 Ribosomal protein S7p/S5e FFE90_000710 PF00679 Elongation factor G C-terminus FFE90_000710 PF00009 Elongation factor Tu GTP binding domain FFE90_000710 PF03144 Elongation factor Tu domain 2 FFE90_000710 PF14492 Elongation Factor G, domain II FFE90_000710 PF03764 Elongation factor G, domain IV FFE90_000715 PF03143 Elongation factor Tu C-terminal domain FFE90_000715 PF03144 Elongation factor Tu domain 2 FFE90_000715 PF00009 Elongation factor Tu GTP binding domain FFE90_000720 PF12146 Serine aminopeptidase, S33 FFE90_000725 PF00338 Ribosomal protein S10p/S20e FFE90_000730 PF00297 Ribosomal protein L3 FFE90_000735 PF00573 Ribosomal protein L4/L1 family FFE90_000740 PF00276 Ribosomal protein L23 FFE90_000745 PF00181 Ribosomal Proteins L2, RNA binding domain FFE90_000745 PF03947 Ribosomal Proteins L2, C-terminal domain FFE90_000750 PF00203 Ribosomal protein S19 FFE90_000755 PF00237 Ribosomal protein L22p/L17e FFE90_000760 PF00189 Ribosomal protein S3, C-terminal domain FFE90_000760 PF07650 KH domain FFE90_000765 PF00252 Ribosomal protein L16p/L10e FFE90_000770 PF00831 Ribosomal L29 protein FFE90_000775 PF00366 Ribosomal protein S17 FFE90_000780 PF00238 Ribosomal protein L14p/L23e FFE90_000785 PF00467 KOW motif FFE90_000785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FFE90_000790 PF00673 ribosomal L5P family C-terminus FFE90_000790 PF00281 Ribosomal protein L5 FFE90_000795 PF00253 Ribosomal protein S14p/S29e FFE90_000800 PF00410 Ribosomal protein S8 FFE90_000805 PF00347 Ribosomal protein L6 FFE90_000810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FFE90_000815 PF00333 Ribosomal protein S5, N-terminal domain FFE90_000815 PF03719 Ribosomal protein S5, C-terminal domain FFE90_000820 PF00327 Ribosomal protein L30p/L7e FFE90_000825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FFE90_000830 PF00344 SecY translocase FFE90_000835 PF05191 Adenylate kinase, active site lid FFE90_000840 PF00557 Metallopeptidase family M24 FFE90_000850 PF01176 Translation initiation factor 1A / IF-1 FFE90_000855 PF00444 Ribosomal protein L36 FFE90_000860 PF00416 Ribosomal protein S13/S18 FFE90_000865 PF00411 Ribosomal protein S11 FFE90_000870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FFE90_000870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FFE90_000870 PF01000 RNA polymerase Rpb3/RpoA insert domain FFE90_000875 PF01196 Ribosomal protein L17 FFE90_000880 PF00005 ABC transporter FFE90_000885 PF00005 ABC transporter FFE90_000890 PF02361 Cobalt transport protein FFE90_000895 PF01416 tRNA pseudouridine synthase FFE90_000900 PF00572 Ribosomal protein L13 FFE90_000905 PF00380 Ribosomal protein S9/S16 FFE90_000910 PF08241 Methyltransferase domain FFE90_000915 PF10730 Protein of unknown function (DUF2521) FFE90_000920 PF01520 N-acetylmuramoyl-L-alanine amidase FFE90_000925 PF10609 NUBPL iron-transfer P-loop NTPase FFE90_000930 PF17898 Spore germination GerD central core domain FFE90_000935 PF14089 KinB-signalling pathway activation in sporulation FFE90_000940 PF01522 Polysaccharide deacetylase FFE90_001025 PF00916 Sulfate permease family FFE90_001025 PF01740 STAS domain FFE90_001030 PF01758 Sodium Bile acid symporter family FFE90_001035 PF00756 Putative esterase FFE90_001040 PF01032 FecCD transport family FFE90_001045 PF01032 FecCD transport family FFE90_001050 PF01497 Periplasmic binding protein FFE90_001055 PF12833 Helix-turn-helix domain FFE90_001055 PF01497 Periplasmic binding protein FFE90_001060 PF07075 Protein of unknown function (DUF1343) FFE90_001065 PF00933 Glycosyl hydrolase family 3 N terminal domain FFE90_001065 PF01915 Glycosyl hydrolase family 3 C-terminal domain FFE90_001070 PF00144 Beta-lactamase FFE90_001075 PF00367 phosphotransferase system, EIIB FFE90_001075 PF02378 Phosphotransferase system, EIIC FFE90_001080 PF01380 SIS domain FFE90_001080 PF01418 Helix-turn-helix domain, rpiR family FFE90_001085 PF01380 SIS domain FFE90_001095 PF04463 Protein of unknown function (DUF523) FFE90_001125 PF04542 Sigma-70 region 2 FFE90_001125 PF08281 Sigma-70, region 4 FFE90_001130 PF13490 Putative zinc-finger FFE90_001135 PF02457 DisA bacterial checkpoint controller nucleotide-binding FFE90_001140 PF07949 YbbR-like protein FFE90_001145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFE90_001145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFE90_001145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFE90_001145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFE90_001150 PF01380 SIS domain FFE90_001160 PF00730 HhH-GPD superfamily base excision DNA repair protein FFE90_001160 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain FFE90_001165 PF02805 Metal binding domain of Ada FFE90_001165 PF12833 Helix-turn-helix domain FFE90_001170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FFE90_001170 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FFE90_001175 PF00361 Proton-conducting membrane transporter FFE90_001175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFE90_001180 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) FFE90_001195 PF10057 Uncharacterized conserved protein (DUF2294) FFE90_001205 PF07690 Major Facilitator Superfamily FFE90_001220 PF13186 Iron-sulfur cluster-binding domain FFE90_001220 PF04055 Radical SAM superfamily FFE90_001225 PF02517 CPBP intramembrane metalloprotease FFE90_001230 PF00005 ABC transporter FFE90_001245 PF13905 Thioredoxin-like FFE90_001250 PF00561 alpha/beta hydrolase fold FFE90_001255 PF00072 Response regulator receiver domain FFE90_001255 PF00486 Transcriptional regulatory protein, C terminal FFE90_001260 PF00512 His Kinase A (phospho-acceptor) domain FFE90_001260 PF00672 HAMP domain FFE90_001270 PF00069 Protein kinase domain FFE90_001280 PF16226 Domain of unknown function (DUF4885) FFE90_001285 PF00324 Amino acid permease FFE90_001290 PF17334 Minor curli fiber component A FFE90_001295 PF17340 Family of unknown function (DUF5370) FFE90_001300 PF00905 Penicillin binding protein transpeptidase domain FFE90_001305 PF00067 Cytochrome P450 FFE90_001315 PF13520 Amino acid permease FFE90_001320 PF03009 Glycerophosphoryl diester phosphodiesterase family FFE90_001325 PF07690 Major Facilitator Superfamily FFE90_001335 PF10852 Protein of unknown function (DUF2651) FFE90_001340 PF00583 Acetyltransferase (GNAT) family FFE90_001340 PF01047 MarR family FFE90_001345 PF07690 Major Facilitator Superfamily FFE90_001360 PF01471 Putative peptidoglycan binding domain FFE90_001360 PF08924 Domain of unknown function (DUF1906) FFE90_001365 PF00892 EamA-like transporter family FFE90_001370 PF12833 Helix-turn-helix domain FFE90_001370 PF02311 AraC-like ligand binding domain FFE90_001375 PF02222 ATP-grasp domain FFE90_001380 PF00089 Trypsin FFE90_001385 PF10794 Protein of unknown function (DUF2606) FFE90_001390 PF12697 Alpha/beta hydrolase family FFE90_001395 PF01066 CDP-alcohol phosphatidyltransferase FFE90_001400 PF09335 SNARE associated Golgi protein FFE90_001405 PF02666 Phosphatidylserine decarboxylase FFE90_001415 PF05139 Erythromycin esterase FFE90_001420 PF12833 Helix-turn-helix domain FFE90_001430 PF00375 Sodium:dicarboxylate symporter family FFE90_001435 PF02378 Phosphotransferase system, EIIC FFE90_001435 PF00367 phosphotransferase system, EIIB FFE90_001435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE90_001440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FFE90_001450 PF07853 Protein of unknown function (DUF1648) FFE90_001455 PF01063 Amino-transferase class IV FFE90_001460 PF00324 Amino acid permease FFE90_001465 PF02574 Homocysteine S-methyltransferase FFE90_001475 PF01235 Sodium:alanine symporter family FFE90_001480 PF04960 Glutaminase FFE90_001485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_001490 PF08664 YcbB domain FFE90_001490 PF00072 Response regulator receiver domain FFE90_001500 PF00701 Dihydrodipicolinate synthetase family FFE90_001505 PF00171 Aldehyde dehydrogenase family FFE90_001510 PF07690 Major Facilitator Superfamily FFE90_001515 PF13378 Enolase C-terminal domain-like FFE90_001520 PF00392 Bacterial regulatory proteins, gntR family FFE90_001520 PF07729 FCD domain FFE90_001525 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FFE90_001525 PF08666 SAF domain FFE90_001530 PF01636 Phosphotransferase enzyme family FFE90_001535 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein FFE90_001540 PF00892 EamA-like transporter family FFE90_001545 PF00486 Transcriptional regulatory protein, C terminal FFE90_001545 PF00072 Response regulator receiver domain FFE90_001550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_001550 PF00512 His Kinase A (phospho-acceptor) domain FFE90_001555 PF00005 ABC transporter FFE90_001570 PF10710 Protein of unknown function (DUF2512) FFE90_001575 PF07486 Cell Wall Hydrolase FFE90_001580 PF10138 vWA found in TerF C terminus FFE90_001590 PF16655 PhoD-like phosphatase, N-terminal domain FFE90_001590 PF09423 PhoD-like phosphatase FFE90_001595 PF02416 mttA/Hcf106 family FFE90_001600 PF00902 Sec-independent protein translocase protein (TatC) FFE90_001605 PF01470 Pyroglutamyl peptidase FFE90_001610 PF00266 Aminotransferase class-V FFE90_001615 PF07690 Major Facilitator Superfamily FFE90_001620 PF00440 Bacterial regulatory proteins, tetR family FFE90_001625 PF17763 Glutaminase/Asparaginase C-terminal domain FFE90_001625 PF00710 Asparaginase, N-terminal FFE90_001630 PF01674 Lipase (class 2) FFE90_001635 PF06271 RDD family FFE90_001640 PF05225 helix-turn-helix, Psq domain FFE90_001640 PF02810 SEC-C motif FFE90_001645 PF14501 GHKL domain FFE90_001650 PF04397 LytTr DNA-binding domain FFE90_001650 PF00072 Response regulator receiver domain FFE90_001655 PF00005 ABC transporter FFE90_001660 PF12679 ABC-2 family transporter protein FFE90_001665 PF00248 Aldo/keto reductase family FFE90_001670 PF11611 Domain of unknown function (DUF4352) FFE90_001670 PF17118 Domain of unknown function (DUF5105) FFE90_001680 PF16244 Domain of unknown function (DUF4901) FFE90_001685 PF16244 Domain of unknown function (DUF4901) FFE90_001690 PF13539 D-alanyl-D-alanine carboxypeptidase FFE90_001695 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_001705 PF00128 Alpha amylase, catalytic domain FFE90_001710 PF01297 Zinc-uptake complex component A periplasmic FFE90_001715 PF00005 ABC transporter FFE90_001720 PF00950 ABC 3 transport family FFE90_001725 PF00296 Luciferase-like monooxygenase FFE90_001735 PF02342 TerD domain FFE90_001740 PF02342 TerD domain FFE90_001745 PF03741 Integral membrane protein TerC family FFE90_001750 PF14266 Putative component of 'biosynthetic module' FFE90_001755 PF05816 Toxic anion resistance protein (TelA) FFE90_001760 PF07690 Major Facilitator Superfamily FFE90_001770 PF07690 Major Facilitator Superfamily FFE90_001780 PF00571 CBS domain FFE90_001780 PF00005 ABC transporter FFE90_001785 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_001790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFE90_001795 PF07687 Peptidase dimerisation domain FFE90_001795 PF01546 Peptidase family M20/M25/M40 FFE90_001800 PF03606 C4-dicarboxylate anaerobic carrier FFE90_001810 PF16738 Starch-binding module 26 FFE90_001810 PF00128 Alpha amylase, catalytic domain FFE90_001815 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FFE90_001815 PF00056 lactate/malate dehydrogenase, NAD binding domain FFE90_001820 PF02652 L-lactate permease FFE90_001825 PF07690 Major Facilitator Superfamily FFE90_001830 PF01047 MarR family FFE90_001835 PF01810 LysE type translocator FFE90_001840 PF08892 YqcI/YcgG family FFE90_001845 PF00324 Amino acid permease FFE90_001850 PF09347 Domain of unknown function (DUF1989) FFE90_001855 PF02540 NAD synthase FFE90_001870 PF01202 Shikimate kinase FFE90_001875 PF08241 Methyltransferase domain FFE90_001880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_001880 PF03466 LysR substrate binding domain FFE90_001885 PF05448 Acetyl xylan esterase (AXE1) FFE90_001890 PF10127 RNA repair pathway DNA polymerase beta family FFE90_001895 PF01619 Proline dehydrogenase FFE90_001900 PF00171 Aldehyde dehydrogenase family FFE90_001905 PF00474 Sodium:solute symporter family FFE90_001910 PF13556 PucR C-terminal helix-turn-helix domain FFE90_001910 PF17853 GGDEF-like domain FFE90_001915 PF09323 Domain of unknown function (DUF1980) FFE90_001920 PF03773 Predicted permease FFE90_001925 PF00561 alpha/beta hydrolase fold FFE90_001930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_001935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE90_001940 PF00355 Rieske [2Fe-2S] domain FFE90_001945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FFE90_001945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FFE90_001945 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_001945 PF18267 Rubredoxin NAD+ reductase C-terminal domain FFE90_001945 PF04324 BFD-like [2Fe-2S] binding domain FFE90_001950 PF01568 Molydopterin dinucleotide binding domain FFE90_001950 PF00384 Molybdopterin oxidoreductase FFE90_001950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE90_001955 PF18267 Rubredoxin NAD+ reductase C-terminal domain FFE90_001955 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_001955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FFE90_001955 PF04324 BFD-like [2Fe-2S] binding domain FFE90_001960 PF07690 Major Facilitator Superfamily FFE90_001965 PF02649 Type I GTP cyclohydrolase folE2 FFE90_001970 PF03734 L,D-transpeptidase catalytic domain FFE90_001980 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFE90_001980 PF07683 Cobalamin synthesis protein cobW C-terminal domain FFE90_001985 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_001990 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE90_002000 PF06271 RDD family FFE90_002005 PF10925 Protein of unknown function (DUF2680) FFE90_002010 PF00232 Glycosyl hydrolase family 1 FFE90_002015 PF11033 Competence protein J (ComJ) FFE90_002020 PF14040 Deoxyribonuclease NucA/NucB FFE90_002025 PF00672 HAMP domain FFE90_002025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_002025 PF17202 Single cache domain 3 FFE90_002030 PF01380 SIS domain FFE90_002035 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FFE90_002040 PF01638 HxlR-like helix-turn-helix FFE90_002045 PF13193 AMP-binding enzyme C-terminal domain FFE90_002045 PF00668 Condensation domain FFE90_002045 PF00550 Phosphopantetheine attachment site FFE90_002045 PF00501 AMP-binding enzyme FFE90_002050 PF00550 Phosphopantetheine attachment site FFE90_002050 PF13193 AMP-binding enzyme C-terminal domain FFE90_002050 PF00501 AMP-binding enzyme FFE90_002050 PF00668 Condensation domain FFE90_002055 PF00975 Thioesterase domain FFE90_002055 PF00501 AMP-binding enzyme FFE90_002055 PF00668 Condensation domain FFE90_002055 PF00550 Phosphopantetheine attachment site FFE90_002055 PF13193 AMP-binding enzyme C-terminal domain FFE90_002060 PF00975 Thioesterase domain FFE90_002065 PF07690 Major Facilitator Superfamily FFE90_002070 PF14317 YcxB-like protein FFE90_002075 PF00892 EamA-like transporter family FFE90_002080 PF00392 Bacterial regulatory proteins, gntR family FFE90_002080 PF00155 Aminotransferase class I and II FFE90_002085 PF01648 4'-phosphopantetheinyl transferase superfamily FFE90_002095 PF00005 ABC transporter FFE90_002100 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_002105 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE90_002110 PF03466 LysR substrate binding domain FFE90_002110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_002115 PF02441 Flavoprotein FFE90_002120 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FFE90_002135 PF00561 alpha/beta hydrolase fold FFE90_002140 PF00854 POT family FFE90_002145 PF12708 Pectate lyase superfamily protein FFE90_002145 PF13229 Right handed beta helix region FFE90_002155 PF03323 Bacillus/Clostridium GerA spore germination protein FFE90_002160 PF05504 Spore germination B3/ GerAC like, C-terminal FFE90_002165 PF03845 Spore germination protein FFE90_002170 PF00005 ABC transporter FFE90_002175 PF12704 MacB-like periplasmic core domain FFE90_002175 PF02687 FtsX-like permease family FFE90_002180 PF00072 Response regulator receiver domain FFE90_002180 PF00486 Transcriptional regulatory protein, C terminal FFE90_002185 PF00672 HAMP domain FFE90_002185 PF00512 His Kinase A (phospho-acceptor) domain FFE90_002185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_002190 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_002195 PF11131 Rap-phr extracellular signalling FFE90_002200 PF09680 Family of unknown function FFE90_002205 PF09680 Family of unknown function FFE90_002210 PF00696 Amino acid kinase family FFE90_002210 PF13840 ACT domain FFE90_002215 PF01032 FecCD transport family FFE90_002220 PF01032 FecCD transport family FFE90_002225 PF00005 ABC transporter FFE90_002230 PF01497 Periplasmic binding protein FFE90_002235 PF07690 Major Facilitator Superfamily FFE90_002240 PF00440 Bacterial regulatory proteins, tetR family FFE90_002245 PF00881 Nitroreductase family FFE90_002250 PF03992 Antibiotic biosynthesis monooxygenase FFE90_002255 PF01022 Bacterial regulatory protein, arsR family FFE90_002260 PF00392 Bacterial regulatory proteins, gntR family FFE90_002260 PF00155 Aminotransferase class I and II FFE90_002265 PF00202 Aminotransferase class-III FFE90_002270 PF00171 Aldehyde dehydrogenase family FFE90_002275 PF06800 Sugar transport protein FFE90_002285 PF07987 Domain of unkown function (DUF1775) FFE90_002290 PF04234 CopC domain FFE90_002290 PF13115 YtkA-like FFE90_002290 PF05425 Copper resistance protein D FFE90_002295 PF08220 DeoR-like helix-turn-helix domain FFE90_002295 PF05573 NosL FFE90_002305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE90_002305 PF02378 Phosphotransferase system, EIIC FFE90_002310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE90_002315 PF01232 Mannitol dehydrogenase Rossmann domain FFE90_002315 PF08125 Mannitol dehydrogenase C-terminal domain FFE90_002320 PF00180 Isocitrate/isopropylmalate dehydrogenase FFE90_002325 PF10502 Signal peptidase, peptidase S26 FFE90_002330 PF01738 Dienelactone hydrolase family FFE90_002335 PF07977 FabA-like domain FFE90_002350 PF03746 LamB/YcsF family FFE90_002355 PF01566 Natural resistance-associated macrophage protein FFE90_002360 PF07286 Protein of unknown function (DUF1445) FFE90_002365 PF02682 Carboxyltransferase domain, subdomain C and D FFE90_002370 PF02626 Carboxyltransferase domain, subdomain A and B FFE90_002375 PF09339 IclR helix-turn-helix domain FFE90_002375 PF01614 Bacterial transcriptional regulator FFE90_002380 PF13472 GDSL-like Lipase/Acylhydrolase family FFE90_002385 PF13129 Protein of unknown function (DUF3953) FFE90_002390 PF03992 Antibiotic biosynthesis monooxygenase FFE90_002395 PF00905 Penicillin binding protein transpeptidase domain FFE90_002395 PF03717 Penicillin-binding Protein dimerisation domain FFE90_002395 PF05223 NTF2-like N-terminal transpeptidase domain FFE90_002400 PF00248 Aldo/keto reductase family FFE90_002405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE90_002405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE90_002405 PF08279 HTH domain FFE90_002405 PF05043 Mga helix-turn-helix domain FFE90_002405 PF00874 PRD domain FFE90_002410 PF00501 AMP-binding enzyme FFE90_002410 PF13193 AMP-binding enzyme C-terminal domain FFE90_002415 PF13649 Methyltransferase domain FFE90_002430 PF13302 Acetyltransferase (GNAT) domain FFE90_002435 PF16242 Pyridoxamine 5'-phosphate oxidase like FFE90_002440 PF10997 Alternate to MurJ FFE90_002445 PF12823 Domain of unknown function (DUF3817) FFE90_002450 PF01037 Lrp/AsnC ligand binding domain FFE90_002455 PF01131 DNA topoisomerase FFE90_002455 PF01751 Toprim domain FFE90_002465 PF00990 Diguanylate cyclase, GGDEF domain FFE90_002470 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) FFE90_002480 PF03170 Bacterial cellulose synthase subunit FFE90_002485 PF13520 Amino acid permease FFE90_002490 PF00293 NUDIX domain FFE90_002495 PF00205 Thiamine pyrophosphate enzyme, central domain FFE90_002495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE90_002495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE90_002510 PF01566 Natural resistance-associated macrophage protein FFE90_002515 PF04226 Transglycosylase associated protein FFE90_002520 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) FFE90_002525 PF12787 EcsC protein family FFE90_002530 PF10685 Stress-induced bacterial acidophilic repeat motif FFE90_002530 PF00477 Small hydrophilic plant seed protein FFE90_002535 PF07883 Cupin domain FFE90_002540 PF16291 Domain of unknown function (DUF4937 FFE90_002545 PF05067 Manganese containing catalase FFE90_002550 PF03480 Bacterial extracellular solute-binding protein, family 7 FFE90_002555 PF17203 Single cache domain 3 FFE90_002555 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FFE90_002555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_002560 PF08279 HTH domain FFE90_002560 PF00072 Response regulator receiver domain FFE90_002565 PF00375 Sodium:dicarboxylate symporter family FFE90_002570 PF01594 AI-2E family transporter FFE90_002575 PF00005 ABC transporter FFE90_002590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFE90_002590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FFE90_002590 PF02770 Acyl-CoA dehydrogenase, middle domain FFE90_002595 PF13040 Fur-regulated basic protein B FFE90_002605 PF01545 Cation efflux family FFE90_002605 PF16916 Dimerisation domain of Zinc Transporter FFE90_002610 PF00085 Thioredoxin FFE90_002615 PF01820 D-ala D-ala ligase N-terminus FFE90_002615 PF07478 D-ala D-ala ligase C-terminus FFE90_002620 PF08245 Mur ligase middle domain FFE90_002620 PF01225 Mur ligase family, catalytic domain FFE90_002620 PF02875 Mur ligase family, glutamate ligase domain FFE90_002630 PF00271 Helicase conserved C-terminal domain FFE90_002630 PF00270 DEAD/DEAH box helicase FFE90_002635 PF03703 Bacterial PH domain FFE90_002640 PF03703 Bacterial PH domain FFE90_002650 PF01694 Rhomboid family FFE90_002655 PF01648 4'-phosphopantetheinyl transferase superfamily FFE90_002665 PF01168 Alanine racemase, N-terminal domain FFE90_002665 PF00842 Alanine racemase, C-terminal domain FFE90_002670 PF01402 Ribbon-helix-helix protein, copG family FFE90_002675 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FFE90_002680 PF08678 Rsbr N terminal FFE90_002680 PF01740 STAS domain FFE90_002685 PF01740 STAS domain FFE90_002690 PF13581 Histidine kinase-like ATPase domain FFE90_002695 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain FFE90_002695 PF07228 Stage II sporulation protein E (SpoIIE) FFE90_002700 PF01740 STAS domain FFE90_002705 PF13581 Histidine kinase-like ATPase domain FFE90_002710 PF04545 Sigma-70, region 4 FFE90_002710 PF04539 Sigma-70 region 3 FFE90_002710 PF04542 Sigma-70 region 2 FFE90_002715 PF07228 Stage II sporulation protein E (SpoIIE) FFE90_002730 PF01878 EVE domain FFE90_002735 PF01047 MarR family FFE90_002740 PF16921 Tex protein YqgF-like domain FFE90_002740 PF09371 Tex-like protein N-terminal domain FFE90_002740 PF00575 S1 RNA binding domain FFE90_002740 PF17674 HHH domain FFE90_002750 PF17283 SprT-like zinc ribbon domain FFE90_002750 PF10263 SprT-like family FFE90_002790 PF00589 Phage integrase family FFE90_002790 PF14659 Phage integrase, N-terminal SAM-like domain FFE90_002795 PF06114 IrrE N-terminal-like domain FFE90_002800 PF01381 Helix-turn-helix FFE90_002825 PF06125 Bacterial protein of unknown function (DUF961) FFE90_002835 PF18106 Rolling Circle replication initiation protein N-terminal domain FFE90_002835 PF02486 Replication initiation factor FFE90_002855 PF12642 Conjugative transposon protein TcpC FFE90_002865 PF12648 TcpE family FFE90_002875 PF08960 Domain of unknown function (DUF1874) FFE90_002885 PF00877 NlpC/P60 family FFE90_002895 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) FFE90_002900 PF13676 TIR domain FFE90_002905 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_002920 PF00296 Luciferase-like monooxygenase FFE90_002925 PF01037 Lrp/AsnC ligand binding domain FFE90_002930 PF01037 Lrp/AsnC ligand binding domain FFE90_002935 PF00857 Isochorismatase family FFE90_002940 PF12706 Beta-lactamase superfamily domain FFE90_002945 PF07690 Major Facilitator Superfamily FFE90_002945 PF00083 Sugar (and other) transporter FFE90_002965 PF01965 DJ-1/PfpI family FFE90_002970 PF00313 'Cold-shock' DNA-binding domain FFE90_002975 PF02559 CarD-like/TRCF domain FFE90_002990 PF02311 AraC-like ligand binding domain FFE90_002990 PF12833 Helix-turn-helix domain FFE90_002995 PF00892 EamA-like transporter family FFE90_003000 PF06445 GyrI-like small molecule binding domain FFE90_003000 PF12833 Helix-turn-helix domain FFE90_003005 PF00392 Bacterial regulatory proteins, gntR family FFE90_003005 PF00155 Aminotransferase class I and II FFE90_003010 PF07690 Major Facilitator Superfamily FFE90_003020 PF08818 Domain of unknown function (DU1801) FFE90_003030 PF00892 EamA-like transporter family FFE90_003035 PF00392 Bacterial regulatory proteins, gntR family FFE90_003035 PF00155 Aminotransferase class I and II FFE90_003040 PF01575 MaoC like domain FFE90_003045 PF06821 Serine hydrolase FFE90_003050 PF01638 HxlR-like helix-turn-helix FFE90_003055 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FFE90_003055 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FFE90_003060 PF01638 HxlR-like helix-turn-helix FFE90_003065 PF02525 Flavodoxin-like fold FFE90_003070 PF07690 Major Facilitator Superfamily FFE90_003075 PF16859 Tetracyclin repressor-like, C-terminal domain FFE90_003075 PF00440 Bacterial regulatory proteins, tetR family FFE90_003085 PF01022 Bacterial regulatory protein, arsR family FFE90_003090 PF02040 Arsenical pump membrane protein FFE90_003100 PF12746 GNAT acetyltransferase FFE90_003105 PF00892 EamA-like transporter family FFE90_003110 PF00155 Aminotransferase class I and II FFE90_003110 PF00392 Bacterial regulatory proteins, gntR family FFE90_003115 PF01613 Flavin reductase like domain FFE90_003125 PF02627 Carboxymuconolactone decarboxylase family FFE90_003140 PF07730 Histidine kinase FFE90_003140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_003145 PF00196 Bacterial regulatory proteins, luxR family FFE90_003145 PF00072 Response regulator receiver domain FFE90_003150 PF03176 MMPL family FFE90_003155 PF12697 Alpha/beta hydrolase family FFE90_003160 PF04474 Protein of unknown function (DUF554) FFE90_003165 PF06445 GyrI-like small molecule binding domain FFE90_003165 PF13411 MerR HTH family regulatory protein FFE90_003170 PF01545 Cation efflux family FFE90_003170 PF16916 Dimerisation domain of Zinc Transporter FFE90_003175 PF00881 Nitroreductase family FFE90_003180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_003185 PF07681 DoxX FFE90_003190 PF00085 Thioredoxin FFE90_003195 PF10676 Spore germination protein gerPA/gerPF FFE90_003200 PF10676 Spore germination protein gerPA/gerPF FFE90_003205 PF04239 Protein of unknown function (DUF421) FFE90_003210 PF04239 Protein of unknown function (DUF421) FFE90_003215 PF00011 Hsp20/alpha crystallin family FFE90_003220 PF10676 Spore germination protein gerPA/gerPF FFE90_003225 PF10676 Spore germination protein gerPA/gerPF FFE90_003230 PF00440 Bacterial regulatory proteins, tetR family FFE90_003235 PF13564 DoxX-like family FFE90_003240 PF00583 Acetyltransferase (GNAT) family FFE90_003250 PF00324 Amino acid permease FFE90_003255 PF05163 DinB family FFE90_003260 PF01047 MarR family FFE90_003265 PF03176 MMPL family FFE90_003270 PF00881 Nitroreductase family FFE90_003275 PF01047 MarR family FFE90_003280 PF07690 Major Facilitator Superfamily FFE90_003285 PF01925 Sulfite exporter TauE/SafE FFE90_003290 PF00392 Bacterial regulatory proteins, gntR family FFE90_003290 PF07729 FCD domain FFE90_003295 PF01476 LysM domain FFE90_003295 PF00704 Glycosyl hydrolases family 18 FFE90_003300 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase FFE90_003305 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FFE90_003305 PF11611 Domain of unknown function (DUF4352) FFE90_003310 PF00245 Alkaline phosphatase FFE90_003315 PF08818 Domain of unknown function (DU1801) FFE90_003320 PF16302 Domain of unknown function (DUF4944) FFE90_003325 PF00583 Acetyltransferase (GNAT) family FFE90_003330 PF01966 HD domain FFE90_003335 PF07563 Protein of unknown function (DUF1541) FFE90_003340 PF07690 Major Facilitator Superfamily FFE90_003345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE90_003350 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FFE90_003355 PF02378 Phosphotransferase system, EIIC FFE90_003360 PF00232 Glycosyl hydrolase family 1 FFE90_003365 PF00392 Bacterial regulatory proteins, gntR family FFE90_003365 PF07702 UTRA domain FFE90_003370 PF00480 ROK family FFE90_003375 PF01238 Phosphomannose isomerase type I FFE90_003380 PF02156 Glycosyl hydrolase family 26 FFE90_003425 PF02769 AIR synthase related protein, C-terminal domain FFE90_003425 PF00586 AIR synthase related protein, N-terminal domain FFE90_003430 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FFE90_003435 PF00814 Glycoprotease family FFE90_003440 PF00583 Acetyltransferase (GNAT) family FFE90_003445 PF00814 Glycoprotease family FFE90_003450 PF16326 ABC transporter C-terminal domain FFE90_003450 PF12848 ABC transporter FFE90_003450 PF00005 ABC transporter FFE90_003455 PF01967 MoaC family FFE90_003460 PF06971 Putative DNA-binding protein N-terminus FFE90_003460 PF02629 CoA binding domain FFE90_003465 PF02416 mttA/Hcf106 family FFE90_003470 PF00902 Sec-independent protein translocase protein (TatC) FFE90_003475 PF14146 Domain of unknown function (DUF4305) FFE90_003480 PF02517 CPBP intramembrane metalloprotease FFE90_003485 PF00166 Chaperonin 10 Kd subunit FFE90_003490 PF00118 TCP-1/cpn60 chaperonin family FFE90_003520 PF00145 C-5 cytosine-specific DNA methylase FFE90_003525 PF00145 C-5 cytosine-specific DNA methylase FFE90_003545 PF07728 AAA domain (dynein-related subfamily) FFE90_003550 PF09563 LlaJI restriction endonuclease FFE90_003575 PF13176 Tetratricopeptide repeat FFE90_003575 PF00931 NB-ARC domain FFE90_003580 PF00107 Zinc-binding dehydrogenase FFE90_003580 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_003590 PF00294 pfkB family carbohydrate kinase FFE90_003595 PF04012 PspA/IM30 family FFE90_003600 PF08271 TFIIB zinc-binding FFE90_003605 PF04536 TPM domain FFE90_003610 PF13421 SPFH domain-Band 7 family FFE90_003615 PF07885 Ion channel FFE90_003620 PF00083 Sugar (and other) transporter FFE90_003625 PF00107 Zinc-binding dehydrogenase FFE90_003625 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_003630 PF03330 Lytic transglycolase FFE90_003635 PF07676 WD40-like Beta Propeller Repeat FFE90_003645 PF14169 Cold-inducible protein YdjO FFE90_003650 PF12697 Alpha/beta hydrolase family FFE90_003655 PF13170 Protein of unknown function (DUF4003) FFE90_003660 PF00394 Multicopper oxidase FFE90_003660 PF07732 Multicopper oxidase FFE90_003660 PF07731 Multicopper oxidase FFE90_003665 PF00324 Amino acid permease FFE90_003675 PF01545 Cation efflux family FFE90_003675 PF16916 Dimerisation domain of Zinc Transporter FFE90_003680 PF17863 AAA lid domain FFE90_003680 PF07726 ATPase family associated with various cellular activities (AAA) FFE90_003685 PF01882 Protein of unknown function DUF58 FFE90_003690 PF01841 Transglutaminase-like superfamily FFE90_003690 PF13559 Domain of unknown function (DUF4129) FFE90_003690 PF11992 Domain of unknown function (DUF3488) FFE90_003695 PF00117 Glutamine amidotransferase class-I FFE90_003695 PF00958 GMP synthase C terminal domain FFE90_003695 PF02540 NAD synthase FFE90_003700 PF00860 Permease family FFE90_003710 PF13076 Fur-regulated basic protein A FFE90_003715 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FFE90_003720 PF14044 NETI protein FFE90_003725 PF00731 AIR carboxylase FFE90_003730 PF02222 ATP-grasp domain FFE90_003730 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FFE90_003735 PF00206 Lyase FFE90_003735 PF10397 Adenylosuccinate lyase C-terminus FFE90_003740 PF01259 SAICAR synthetase FFE90_003745 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FFE90_003755 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FFE90_003755 PF02769 AIR synthase related protein, C-terminal domain FFE90_003755 PF00586 AIR synthase related protein, N-terminal domain FFE90_003760 PF00156 Phosphoribosyl transferase domain FFE90_003765 PF02769 AIR synthase related protein, C-terminal domain FFE90_003765 PF00586 AIR synthase related protein, N-terminal domain FFE90_003770 PF00551 Formyl transferase FFE90_003775 PF01808 AICARFT/IMPCHase bienzyme FFE90_003775 PF02142 MGS-like domain FFE90_003780 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FFE90_003780 PF02843 Phosphoribosylglycinamide synthetase, C domain FFE90_003780 PF02844 Phosphoribosylglycinamide synthetase, N domain FFE90_003785 PF01037 Lrp/AsnC ligand binding domain FFE90_003790 PF13520 Amino acid permease FFE90_003795 PF11127 Protein of unknown function (DUF2892) FFE90_003800 PF13382 Adenine deaminase C-terminal domain FFE90_003800 PF01979 Amidohydrolase family FFE90_003805 PF17479 Protein of unknown function (DUF3048) C-terminal domain FFE90_003805 PF11258 Protein of unknown function (DUF3048) N-terminal domain FFE90_003810 PF01371 Trp repressor protein FFE90_003815 PF01645 Conserved region in glutamate synthase FFE90_003820 PF01884 PcrB family FFE90_003825 PF00580 UvrD/REP helicase N-terminal domain FFE90_003825 PF13361 UvrD-like helicase C-terminal domain FFE90_003830 PF00533 BRCA1 C Terminus (BRCT) domain FFE90_003830 PF03120 NAD-dependent DNA ligase OB-fold domain FFE90_003830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FFE90_003830 PF12826 Helix-hairpin-helix motif FFE90_003830 PF01653 NAD-dependent DNA ligase adenylation domain FFE90_003835 PF07537 CamS sex pheromone cAM373 precursor FFE90_003840 PF01636 Phosphotransferase enzyme family FFE90_003845 PF02308 MgtC family FFE90_003850 PF00474 Sodium:solute symporter family FFE90_003855 PF02686 Glu-tRNAGln amidotransferase C subunit FFE90_003860 PF01425 Amidase FFE90_003865 PF02934 GatB/GatE catalytic domain FFE90_003865 PF02637 GatB domain FFE90_003870 PF00440 Bacterial regulatory proteins, tetR family FFE90_003875 PF00873 AcrB/AcrD/AcrF family FFE90_003880 PF00781 Diacylglycerol kinase catalytic domain FFE90_003885 PF01938 TRAM domain FFE90_003885 PF05958 tRNA (Uracil-5-)-methyltransferase FFE90_003890 PF13408 Recombinase zinc beta ribbon domain FFE90_003890 PF07508 Recombinase FFE90_003895 PF00239 Resolvase, N terminal domain FFE90_003895 PF18010 Cry35Ab1 HTH C-terminal domain FFE90_003910 PF10544 T5orf172 domain FFE90_003925 PF04634 Protein of unknown function, DUF600 FFE90_003930 PF04740 LXG domain of WXG superfamily FFE90_003940 PF13176 Tetratricopeptide repeat FFE90_003940 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_003950 PF01709 Transcriptional regulator FFE90_003960 PF00440 Bacterial regulatory proteins, tetR family FFE90_003965 PF12680 SnoaL-like domain FFE90_003970 PF01370 NAD dependent epimerase/dehydratase family FFE90_003975 PF11007 Spore coat associated protein JA (CotJA) FFE90_003980 PF12652 CotJB protein FFE90_003985 PF05067 Manganese containing catalase FFE90_003990 PF00583 Acetyltransferase (GNAT) family FFE90_003995 PF14150 YesK-like protein FFE90_004000 PF04854 Protein of unknown function, DUF624 FFE90_004005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_004005 PF02743 Cache domain FFE90_004005 PF00672 HAMP domain FFE90_004005 PF06580 Histidine kinase FFE90_004010 PF12833 Helix-turn-helix domain FFE90_004010 PF00072 Response regulator receiver domain FFE90_004015 PF13416 Bacterial extracellular solute-binding protein FFE90_004020 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_004025 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_004030 PF07470 Glycosyl Hydrolase Family 88 FFE90_004035 PF12833 Helix-turn-helix domain FFE90_004040 PF13472 GDSL-like Lipase/Acylhydrolase family FFE90_004045 PF09224 Domain of unknown function (DUF1961) FFE90_004050 PF04854 Protein of unknown function, DUF624 FFE90_004055 PF18370 Rhamnogalacturonan I lyases beta-sheet domain FFE90_004060 PF01839 FG-GAP repeat FFE90_004060 PF18370 Rhamnogalacturonan I lyases beta-sheet domain FFE90_004065 PF00657 GDSL-like Lipase/Acylhydrolase FFE90_004070 PF08532 Beta-galactosidase trimerisation domain FFE90_004070 PF08533 Beta-galactosidase C-terminal domain FFE90_004070 PF02449 Beta-galactosidase FFE90_004080 PF01547 Bacterial extracellular solute-binding protein FFE90_004085 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_004090 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_004095 PF02056 Family 4 glycosyl hydrolase FFE90_004095 PF11975 Family 4 glycosyl hydrolase C-terminal domain FFE90_004100 PF04239 Protein of unknown function (DUF421) FFE90_004105 PF03992 Antibiotic biosynthesis monooxygenase FFE90_004110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_004125 PF10055 Uncharacterized small protein (DUF2292) FFE90_004130 PF01027 Inhibitor of apoptosis-promoting Bax1 FFE90_004135 PF00892 EamA-like transporter family FFE90_004140 PF01047 MarR family FFE90_004145 PF01494 FAD binding domain FFE90_004150 PF13037 Domain of unknown function (DUF3898) FFE90_004150 PF13039 Protein of unknown function (DUF3900) FFE90_004155 PF00258 Flavodoxin FFE90_004155 PF00067 Cytochrome P450 FFE90_004155 PF00175 Oxidoreductase NAD-binding domain FFE90_004155 PF00667 FAD binding domain FFE90_004160 PF00884 Sulfatase FFE90_004165 PF00483 Nucleotidyl transferase FFE90_004170 PF16363 GDP-mannose 4,6 dehydratase FFE90_004175 PF03407 Nucleotide-diphospho-sugar transferase FFE90_004180 PF00535 Glycosyl transferase family 2 FFE90_004185 PF03407 Nucleotide-diphospho-sugar transferase FFE90_004190 PF07690 Major Facilitator Superfamily FFE90_004195 PF13419 Haloacid dehalogenase-like hydrolase FFE90_004200 PF13520 Amino acid permease FFE90_004205 PF00171 Aldehyde dehydrogenase family FFE90_004210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_004215 PF12848 ABC transporter FFE90_004215 PF16326 ABC transporter C-terminal domain FFE90_004215 PF00005 ABC transporter FFE90_004220 PF10787 Uncharacterised protein from bacillus cereus group FFE90_004225 PF13411 MerR HTH family regulatory protein FFE90_004230 PF07690 Major Facilitator Superfamily FFE90_004245 PF00005 ABC transporter FFE90_004245 PF12848 ABC transporter FFE90_004250 PF00271 Helicase conserved C-terminal domain FFE90_004250 PF00270 DEAD/DEAH box helicase FFE90_004255 PF00583 Acetyltransferase (GNAT) family FFE90_004260 PF00107 Zinc-binding dehydrogenase FFE90_004260 PF16884 N-terminal domain of oxidoreductase FFE90_004270 PF07690 Major Facilitator Superfamily FFE90_004275 PF03781 Sulfatase-modifying factor enzyme 1 FFE90_004280 PF00005 ABC transporter FFE90_004285 PF01032 FecCD transport family FFE90_004290 PF01032 FecCD transport family FFE90_004295 PF01497 Periplasmic binding protein FFE90_004300 PF11486 Protein of unknown function (DUF3212) FFE90_004305 PF11181 Heat induced stress protein YflT FFE90_004310 PF00544 Pectate lyase FFE90_004315 PF00939 Sodium:sulfate symporter transmembrane region FFE90_004320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FFE90_004320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_004325 PF12431 Transcriptional regulator FFE90_004325 PF00072 Response regulator receiver domain FFE90_004325 PF08279 HTH domain FFE90_004330 PF03401 Tripartite tricarboxylate transporter family receptor FFE90_004335 PF03600 Citrate transporter FFE90_004340 PF00753 Metallo-beta-lactamase superfamily FFE90_004345 PF02898 Nitric oxide synthase, oxygenase domain FFE90_004350 PF00708 Acylphosphatase FFE90_004355 PF03475 3-alpha domain FFE90_004355 PF03473 MOSC domain FFE90_004360 PF11121 Protein of unknown function (DUF2639) FFE90_004370 PF11588 Protein of unknown function (DUF3243) FFE90_004375 PF00557 Metallopeptidase family M24 FFE90_004380 PF00367 phosphotransferase system, EIIB FFE90_004380 PF02378 Phosphotransferase system, EIIC FFE90_004385 PF00884 Sulfatase FFE90_004395 PF09350 Domain of unknown function (DUF1992) FFE90_004400 PF01235 Sodium:alanine symporter family FFE90_004405 PF03845 Spore germination protein FFE90_004415 PF05504 Spore germination B3/ GerAC like, C-terminal FFE90_004420 PF03323 Bacillus/Clostridium GerA spore germination protein FFE90_004425 PF00367 phosphotransferase system, EIIB FFE90_004425 PF02378 Phosphotransferase system, EIIC FFE90_004430 PF00128 Alpha amylase, catalytic domain FFE90_004430 PF16657 Maltogenic Amylase, C-terminal domain FFE90_004435 PF00392 Bacterial regulatory proteins, gntR family FFE90_004435 PF07702 UTRA domain FFE90_004440 PF00881 Nitroreductase family FFE90_004445 PF02872 5'-nucleotidase, C-terminal domain FFE90_004445 PF00149 Calcineurin-like phosphoesterase FFE90_004450 PF01965 DJ-1/PfpI family FFE90_004455 PF07690 Major Facilitator Superfamily FFE90_004460 PF06569 Protein of unknown function (DUF1128) FFE90_004465 PF01451 Low molecular weight phosphotyrosine protein phosphatase FFE90_004475 PF03631 Virulence factor BrkB FFE90_004480 PF07690 Major Facilitator Superfamily FFE90_004485 PF01699 Sodium/calcium exchanger protein FFE90_004490 PF14167 YfkD-like protein FFE90_004495 PF00924 Mechanosensitive ion channel FFE90_004500 PF04055 Radical SAM superfamily FFE90_004500 PF08756 YfkB-like domain FFE90_004510 PF01522 Polysaccharide deacetylase FFE90_004515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFE90_004515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFE90_004520 PF01544 CorA-like Mg2+ transporter protein FFE90_004525 PF00730 HhH-GPD superfamily base excision DNA repair protein FFE90_004530 PF05958 tRNA (Uracil-5-)-methyltransferase FFE90_004530 PF01938 TRAM domain FFE90_004535 PF14118 YfzA-like protein FFE90_004540 PF01207 Dihydrouridine synthase (Dus) FFE90_004555 PF00676 Dehydrogenase E1 component FFE90_004560 PF02779 Transketolase, pyrimidine binding domain FFE90_004560 PF02780 Transketolase, C-terminal domain FFE90_004565 PF00364 Biotin-requiring enzyme FFE90_004565 PF02817 e3 binding domain FFE90_004565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FFE90_004570 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_004570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFE90_004575 PF02954 Bacterial regulatory protein, Fis family FFE90_004575 PF01590 GAF domain FFE90_004575 PF00158 Sigma-54 interaction domain FFE90_004580 PF08141 Small acid-soluble spore protein H family FFE90_004585 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FFE90_004590 PF17353 Family of unknown function (DUF5381) FFE90_004595 PF17353 Family of unknown function (DUF5381) FFE90_004610 PF06013 Proteins of 100 residues with WXG FFE90_004615 PF11975 Family 4 glycosyl hydrolase C-terminal domain FFE90_004615 PF02056 Family 4 glycosyl hydrolase FFE90_004620 PF01380 SIS domain FFE90_004620 PF01418 Helix-turn-helix domain, rpiR family FFE90_004625 PF02378 Phosphotransferase system, EIIC FFE90_004625 PF00367 phosphotransferase system, EIIB FFE90_004630 PF00005 ABC transporter FFE90_004630 PF00664 ABC transporter transmembrane region FFE90_004635 PF00664 ABC transporter transmembrane region FFE90_004635 PF00005 ABC transporter FFE90_004640 PF07681 DoxX FFE90_004645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_004650 PF02311 AraC-like ligand binding domain FFE90_004650 PF12833 Helix-turn-helix domain FFE90_004655 PF00083 Sugar (and other) transporter FFE90_004660 PF01261 Xylose isomerase-like TIM barrel FFE90_004665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_004665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_004670 PF07730 Histidine kinase FFE90_004675 PF00072 Response regulator receiver domain FFE90_004675 PF00196 Bacterial regulatory proteins, luxR family FFE90_004680 PF00005 ABC transporter FFE90_004695 PF10400 Virulence activator alpha C-term FFE90_004695 PF03551 Transcriptional regulator PadR-like family FFE90_004700 PF01674 Lipase (class 2) FFE90_004705 PF01757 Acyltransferase family FFE90_004710 PF17922 Tetracyclin repressor-like, C-terminal domain FFE90_004710 PF00440 Bacterial regulatory proteins, tetR family FFE90_004715 PF07690 Major Facilitator Superfamily FFE90_004720 PF12867 DinB superfamily FFE90_004725 PF07690 Major Facilitator Superfamily FFE90_004730 PF01047 MarR family FFE90_004735 PF09924 Uncharacterised conserved protein (DUF2156) FFE90_004735 PF03706 Lysylphosphatidylglycerol synthase TM region FFE90_004740 PF01497 Periplasmic binding protein FFE90_004745 PF01032 FecCD transport family FFE90_004750 PF01032 FecCD transport family FFE90_004755 PF02567 Phenazine biosynthesis-like protein FFE90_004760 PF00881 Nitroreductase family FFE90_004765 PF14151 YfhD-like protein FFE90_004770 PF14152 YfhE-like protein FFE90_004775 PF01370 NAD dependent epimerase/dehydratase family FFE90_004775 PF08338 Domain of unknown function (DUF1731) FFE90_004780 PF02631 RecX family FFE90_004785 PF08838 Protein of unknown function (DUF1811) FFE90_004790 PF07690 Major Facilitator Superfamily FFE90_004795 PF08176 Small acid-soluble spore protein K family FFE90_004800 PF14043 WVELL protein FFE90_004805 PF08239 Bacterial SH3 domain FFE90_004810 PF13630 SdpI/YhfL protein family FFE90_004815 PF00561 alpha/beta hydrolase fold FFE90_004820 PF00535 Glycosyl transferase family 2 FFE90_004825 PF09586 Bacterial membrane protein YfhO FFE90_004830 PF04307 LexA-binding, inner membrane-associated putative hydrolase FFE90_004835 PF14815 NUDIX domain FFE90_004835 PF00730 HhH-GPD superfamily base excision DNA repair protein FFE90_004850 PF04259 Small, acid-soluble spore protein, gamma-type FFE90_004855 PF14182 YgaB-like protein FFE90_004860 PF04167 Protein of unknown function (DUF402) FFE90_004865 PF00005 ABC transporter FFE90_004865 PF00664 ABC transporter transmembrane region FFE90_004870 PF06081 Aromatic acid exporter family member 1 FFE90_004875 PF00202 Aminotransferase class-III FFE90_004880 PF00578 AhpC/TSA family FFE90_004885 PF01475 Ferric uptake regulator family FFE90_004890 PF11023 Zinc-ribbon containing domain FFE90_004895 PF18576 Helix-turn-helix domain FFE90_004895 PF14540 Nucleotidyltransferase-like FFE90_004995 PF07070 SpoOM protein FFE90_005005 PF07875 Coat F domain FFE90_005010 PF03575 Peptidase family S51 FFE90_005015 PF13667 ThiC-associated domain FFE90_005015 PF01964 Radical SAM ThiC family FFE90_005020 PF01565 FAD binding domain FFE90_005020 PF08031 Berberine and berberine like FFE90_005025 PF13040 Fur-regulated basic protein B FFE90_005030 PF06628 Catalase-related immune-responsive FFE90_005030 PF00199 Catalase FFE90_005035 PF00005 ABC transporter FFE90_005040 PF09084 NMT1/THI5 like FFE90_005045 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_005050 PF00296 Luciferase-like monooxygenase FFE90_005060 PF00253 Ribosomal protein S14p/S29e FFE90_005070 PF01381 Helix-turn-helix FFE90_005085 PF08331 Domain of unknown function (DUF1730) FFE90_005090 PF12671 Putative amidase domain FFE90_005095 PF00588 SpoU rRNA Methylase family FFE90_005100 PF13171 Protein of unknown function (DUF4004) FFE90_005105 PF04519 Polymer-forming cytoskeletal FFE90_005115 PF08298 PrkA AAA domain FFE90_005115 PF06798 PrkA serine protein kinase C-terminal domain FFE90_005120 PF04285 Protein of unknown function (DUF444) FFE90_005125 PF01047 MarR family FFE90_005135 PF07690 Major Facilitator Superfamily FFE90_005140 PF03358 NADPH-dependent FMN reductase FFE90_005160 PF00392 Bacterial regulatory proteins, gntR family FFE90_005165 PF00005 ABC transporter FFE90_005170 PF00005 ABC transporter FFE90_005175 PF12679 ABC-2 family transporter protein FFE90_005180 PF00313 'Cold-shock' DNA-binding domain FFE90_005190 PF03180 NLPA lipoprotein FFE90_005195 PF07694 5TMR of 5TMR-LYT FFE90_005195 PF00990 Diguanylate cyclase, GGDEF domain FFE90_005200 PF00375 Sodium:dicarboxylate symporter family FFE90_005210 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FFE90_005220 PF07875 Coat F domain FFE90_005225 PF00565 Staphylococcal nuclease homologue FFE90_005225 PF00149 Calcineurin-like phosphoesterase FFE90_005225 PF00746 LPXTG cell wall anchor motif FFE90_005225 PF02872 5'-nucleotidase, C-terminal domain FFE90_005230 PF04203 Sortase domain FFE90_005235 PF01479 S4 domain FFE90_005235 PF00849 RNA pseudouridylate synthase FFE90_005240 PF17326 Family of unknown function (DUF5365) FFE90_005245 PF00571 CBS domain FFE90_005250 PF13419 Haloacid dehalogenase-like hydrolase FFE90_005255 PF00795 Carbon-nitrogen hydrolase FFE90_005255 PF00583 Acetyltransferase (GNAT) family FFE90_005260 PF00202 Aminotransferase class-III FFE90_005265 PF04309 Glycerol-3-phosphate responsive antiterminator FFE90_005270 PF00230 Major intrinsic protein FFE90_005275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE90_005275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE90_005280 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FFE90_005280 PF01266 FAD dependent oxidoreductase FFE90_005285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFE90_005285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFE90_005285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFE90_005285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFE90_005290 PF13185 GAF domain FFE90_005290 PF07730 Histidine kinase FFE90_005295 PF00196 Bacterial regulatory proteins, luxR family FFE90_005295 PF00072 Response regulator receiver domain FFE90_005300 PF03358 NADPH-dependent FMN reductase FFE90_005305 PF14148 YhdB-like protein FFE90_005310 PF13028 Protein of unknown function (DUF3889) FFE90_005315 PF00877 NlpC/P60 family FFE90_005315 PF01476 LysM domain FFE90_005320 PF02082 Transcriptional regulator FFE90_005325 PF05552 Conserved TM helix FFE90_005330 PF04293 SpoVR like protein FFE90_005335 PF00245 Alkaline phosphatase FFE90_005340 PF01476 LysM domain FFE90_005340 PF00877 NlpC/P60 family FFE90_005345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_005345 PF03466 LysR substrate binding domain FFE90_005350 PF00285 Citrate synthase, C-terminal domain FFE90_005360 PF13520 Amino acid permease FFE90_005365 PF00209 Sodium:neurotransmitter symporter family FFE90_005370 PF00392 Bacterial regulatory proteins, gntR family FFE90_005370 PF00155 Aminotransferase class I and II FFE90_005375 PF00583 Acetyltransferase (GNAT) family FFE90_005380 PF17453 Sigma-M inhibitor FFE90_005385 PF13800 Sigma factor regulator N-terminal FFE90_005385 PF13791 Sigma factor regulator C-terminal FFE90_005390 PF08281 Sigma-70, region 4 FFE90_005390 PF04542 Sigma-70 region 2 FFE90_005395 PF00248 Aldo/keto reductase family FFE90_005400 PF01553 Acyltransferase FFE90_005405 PF03471 Transporter associated domain FFE90_005405 PF01595 Cyclin M transmembrane N-terminal domain FFE90_005405 PF00571 CBS domain FFE90_005410 PF13411 MerR HTH family regulatory protein FFE90_005415 PF00155 Aminotransferase class I and II FFE90_005420 PF00571 CBS domain FFE90_005420 PF03471 Transporter associated domain FFE90_005420 PF01595 Cyclin M transmembrane N-terminal domain FFE90_005425 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FFE90_005430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FFE90_005435 PF03009 Glycerophosphoryl diester phosphodiesterase family FFE90_005440 PF17444 Uncharacterized YhdX-like FFE90_005445 PF00924 Mechanosensitive ion channel FFE90_005450 PF02146 Sir2 family FFE90_005455 PF01522 Polysaccharide deacetylase FFE90_005460 PF01063 Amino-transferase class IV FFE90_005465 PF03553 Na+/H+ antiporter family FFE90_005470 PF00582 Universal stress protein family FFE90_005480 PF00664 ABC transporter transmembrane region FFE90_005480 PF00005 ABC transporter FFE90_005485 PF00005 ABC transporter FFE90_005485 PF00664 ABC transporter transmembrane region FFE90_005490 PF13460 NAD(P)H-binding FFE90_005500 PF00269 Small, acid-soluble spore proteins, alpha/beta type FFE90_005505 PF17277 Family of unknown function (DUF5342) FFE90_005510 PF14398 YheC/D like ATP-grasp FFE90_005515 PF14398 YheC/D like ATP-grasp FFE90_005520 PF04286 Protein of unknown function (DUF445) FFE90_005525 PF06133 Control of competence regulator ComK, YlbF/YmcA FFE90_005530 PF08713 DNA alkylation repair enzyme FFE90_005540 PF04055 Radical SAM superfamily FFE90_005545 PF00999 Sodium/hydrogen exchanger family FFE90_005550 PF02080 TrkA-C domain FFE90_005560 PF00378 Enoyl-CoA hydratase/isomerase FFE90_005565 PF14120 YhzD-like protein FFE90_005570 PF00005 ABC transporter FFE90_005570 PF13732 Domain of unknown function (DUF4162) FFE90_005580 PF00149 Calcineurin-like phosphoesterase FFE90_005585 PF13514 AAA domain FFE90_005590 PF01966 HD domain FFE90_005595 PF14147 Sporulation protein YhaL FFE90_005605 PF09680 Family of unknown function FFE90_005610 PF09680 Family of unknown function FFE90_005620 PF11667 Putative zincin peptidase FFE90_005625 PF08963 Protein of unknown function (DUF1878) FFE90_005630 PF01047 MarR family FFE90_005635 PF12732 YtxH-like protein FFE90_005645 PF17099 Tryptophan transporter TrpP FFE90_005650 PF00266 Aminotransferase class-V FFE90_005655 PF01230 HIT domain FFE90_005660 PF00005 ABC transporter FFE90_005665 PF05975 Bacterial ABC transporter protein EcsB FFE90_005670 PF12787 EcsC protein family FFE90_005675 PF01546 Peptidase family M20/M25/M40 FFE90_005675 PF07687 Peptidase dimerisation domain FFE90_005690 PF03992 Antibiotic biosynthesis monooxygenase FFE90_005695 PF00905 Penicillin binding protein transpeptidase domain FFE90_005695 PF00912 Transglycosylase FFE90_005700 PF01208 Uroporphyrinogen decarboxylase (URO-D) FFE90_005715 PF00440 Bacterial regulatory proteins, tetR family FFE90_005715 PF17932 Tetracyclin repressor-like, C-terminal domain FFE90_005725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFE90_005725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFE90_005730 PF10086 YhfC intramembrane metalloprotease FFE90_005740 PF05343 M42 glutamyl aminopeptidase FFE90_005745 PF04266 ASCH domain FFE90_005750 PF00375 Sodium:dicarboxylate symporter family FFE90_005755 PF14149 YhfH-like protein FFE90_005760 PF12706 Beta-lactamase superfamily domain FFE90_005765 PF10437 Bacterial lipoate protein ligase C-terminus FFE90_005765 PF03099 Biotin/lipoate A/B protein ligase family FFE90_005770 PF13460 NAD(P)H-binding FFE90_005775 PF13193 AMP-binding enzyme C-terminal domain FFE90_005775 PF00501 AMP-binding enzyme FFE90_005785 PF01435 Peptidase family M48 FFE90_005785 PF16491 CAAX prenyl protease N-terminal, five membrane helices FFE90_005790 PF05922 Peptidase inhibitor I9 FFE90_005790 PF00082 Subtilase family FFE90_005795 PF00583 Acetyltransferase (GNAT) family FFE90_005800 PF00107 Zinc-binding dehydrogenase FFE90_005800 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_005805 PF01497 Periplasmic binding protein FFE90_005810 PF00300 Histidine phosphatase superfamily (branch 1) FFE90_005815 PF00108 Thiolase, N-terminal domain FFE90_005815 PF02803 Thiolase, C-terminal domain FFE90_005820 PF13193 AMP-binding enzyme C-terminal domain FFE90_005820 PF00501 AMP-binding enzyme FFE90_005825 PF02632 BioY family FFE90_005830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_005835 PF01266 FAD dependent oxidoreductase FFE90_005835 PF00355 Rieske [2Fe-2S] domain FFE90_005845 PF08858 IDEAL domain FFE90_005850 PF06338 ComK protein FFE90_005860 PF05901 Excalibur calcium-binding domain FFE90_005865 PF00474 Sodium:solute symporter family FFE90_005870 PF11755 Protein of unknown function (DUF3311) FFE90_005880 PF09335 SNARE associated Golgi protein FFE90_005885 PF10502 Signal peptidase, peptidase S26 FFE90_005890 PF01494 FAD binding domain FFE90_005895 PF01047 MarR family FFE90_005900 PF07690 Major Facilitator Superfamily FFE90_005905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_005905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_005910 PF05116 Sucrose-6F-phosphate phosphohydrolase FFE90_005915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFE90_005920 PF00356 Bacterial regulatory proteins, lacI family FFE90_005925 PF05145 Transition state regulatory protein AbrB FFE90_005930 PF07690 Major Facilitator Superfamily FFE90_005935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE90_005935 PF12793 Sugar transport-related sRNA regulator N-term FFE90_005940 PF03860 Domain of Unknown Function (DUF326) FFE90_005945 PF02915 Rubrerythrin FFE90_005950 PF13361 UvrD-like helicase C-terminal domain FFE90_005950 PF12705 PD-(D/E)XK nuclease superfamily FFE90_005955 PF00580 UvrD/REP helicase N-terminal domain FFE90_005955 PF12705 PD-(D/E)XK nuclease superfamily FFE90_005955 PF13361 UvrD-like helicase C-terminal domain FFE90_005960 PF00149 Calcineurin-like phosphoesterase FFE90_005960 PF12320 Type 5 capsule protein repressor C-terminal domain FFE90_005965 PF13476 AAA domain FFE90_005975 PF10676 Spore germination protein gerPA/gerPF FFE90_005980 PF10970 Spore germination protein GerPE FFE90_005990 PF10737 Spore germination protein GerPC FFE90_005995 PF10803 Spore germination GerPB FFE90_006000 PF10676 Spore germination protein gerPA/gerPF FFE90_006005 PF09388 Spo0E like sporulation regulatory protein FFE90_006010 PF08757 CotH kinase protein FFE90_006015 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFE90_006020 PF07457 Protein of unknown function (DUF1516) FFE90_006025 PF00082 Subtilase family FFE90_006025 PF17936 Bacterial Ig domain FFE90_006030 PF10949 Protein of unknown function (DUF2777) FFE90_006035 PF00733 Asparagine synthase FFE90_006035 PF13537 Glutamine amidotransferase domain FFE90_006040 PF05163 DinB family FFE90_006050 PF01554 MatE FFE90_006055 PF12833 Helix-turn-helix domain FFE90_006055 PF02311 AraC-like ligand binding domain FFE90_006060 PF00356 Bacterial regulatory proteins, lacI family FFE90_006065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_006065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_006070 PF05163 DinB family FFE90_006075 PF01810 LysE type translocator FFE90_006080 PF00392 Bacterial regulatory proteins, gntR family FFE90_006080 PF00155 Aminotransferase class I and II FFE90_006085 PF13599 Pentapeptide repeats (9 copies) FFE90_006090 PF00561 alpha/beta hydrolase fold FFE90_006090 PF08386 TAP-like protein FFE90_006100 PF14306 PUA-like domain FFE90_006100 PF01747 ATP-sulfurylase FFE90_006105 PF01507 Phosphoadenosine phosphosulfate reductase family FFE90_006110 PF04029 2-phosphosulpholactate phosphatase FFE90_006115 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) FFE90_006120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FFE90_006125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFE90_006125 PF13378 Enolase C-terminal domain-like FFE90_006130 PF07690 Major Facilitator Superfamily FFE90_006135 PF18014 Acetyltransferase (GNAT) domain FFE90_006135 PF13673 Acetyltransferase (GNAT) domain FFE90_006140 PF13673 Acetyltransferase (GNAT) domain FFE90_006145 PF02219 Methylenetetrahydrofolate reductase FFE90_006145 PF02574 Homocysteine S-methyltransferase FFE90_006150 PF04461 Protein of unknown function (DUF520) FFE90_006155 PF17783 CvfB-like winged helix domain FFE90_006155 PF13509 S1 domain FFE90_006170 PF17418 Sporulation delaying protein SdpA FFE90_006175 PF03551 Transcriptional regulator PadR-like family FFE90_006185 PF12650 Domain of unknown function (DUF3784) FFE90_006190 PF07504 Fungalysin/Thermolysin Propeptide Motif FFE90_006190 PF02868 Thermolysin metallopeptidase, alpha-helical domain FFE90_006190 PF03413 Peptidase propeptide and YPEB domain FFE90_006190 PF01447 Thermolysin metallopeptidase, catalytic domain FFE90_006195 PF02645 Uncharacterised protein, DegV family COG1307 FFE90_006200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FFE90_006200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FFE90_006205 PF12690 Intracellular proteinase inhibitor FFE90_006210 PF12758 Protein of unknown function (DUF3813) FFE90_006220 PF00326 Prolyl oligopeptidase family FFE90_006225 PF01883 Iron-sulfur cluster assembly protein FFE90_006235 PF01565 FAD binding domain FFE90_006240 PF07690 Major Facilitator Superfamily FFE90_006245 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFE90_006245 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFE90_006250 PF01960 ArgJ family FFE90_006255 PF00696 Amino acid kinase family FFE90_006260 PF00202 Aminotransferase class-III FFE90_006265 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FFE90_006265 PF00117 Glutamine amidotransferase class-I FFE90_006270 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FFE90_006270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFE90_006275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFE90_006275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFE90_006280 PF14168 YjzC-like protein FFE90_006285 PF11151 Protein of unknown function (DUF2929) FFE90_006300 PF02608 ABC transporter substrate-binding protein PnrA-like FFE90_006305 PF10815 ComZ FFE90_006315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFE90_006315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFE90_006320 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE90_006320 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE90_006325 PF10026 Predicted Zn-dependent protease (DUF2268) FFE90_006330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE90_006330 PF00005 ABC transporter FFE90_006335 PF00005 ABC transporter FFE90_006335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE90_006340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE90_006345 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_006350 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE90_006350 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_006355 PF12227 Protein of unknown function (DUF3603) FFE90_006360 PF00579 tRNA synthetases class I (W and Y) FFE90_006365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE90_006370 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_006375 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_006375 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE90_006380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE90_006380 PF00005 ABC transporter FFE90_006385 PF00005 ABC transporter FFE90_006385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE90_006390 PF07690 Major Facilitator Superfamily FFE90_006395 PF13508 Acetyltransferase (GNAT) domain FFE90_006400 PF03960 ArsC family FFE90_006405 PF03741 Integral membrane protein TerC family FFE90_006415 PF05389 Negative regulator of genetic competence (MecA) FFE90_006425 PF06054 Competence protein CoiA-like family FFE90_006430 PF08439 Oligopeptidase F FFE90_006430 PF01432 Peptidase family M3 FFE90_006450 PF01152 Bacterial-like globin FFE90_006455 PF01464 Transglycosylase SLT domain FFE90_006460 PF01928 CYTH domain FFE90_006470 PF04607 Region found in RelA / SpoT proteins FFE90_006475 PF01513 ATP-NAD kinase FFE90_006480 PF00849 RNA pseudouridylate synthase FFE90_006485 PF00149 Calcineurin-like phosphoesterase FFE90_006490 PF00999 Sodium/hydrogen exchanger family FFE90_006490 PF02254 TrkA-N domain FFE90_006490 PF02080 TrkA-C domain FFE90_006495 PF03070 TENA/THI-4/PQQC family FFE90_006500 PF02581 Thiamine monophosphate synthase FFE90_006505 PF01266 FAD dependent oxidoreductase FFE90_006510 PF02597 ThiS family FFE90_006515 PF05690 Thiazole biosynthesis protein ThiG FFE90_006520 PF00899 ThiF family FFE90_006525 PF08543 Phosphomethylpyrimidine kinase FFE90_006535 PF14153 Spore coat protein CotO FFE90_006540 PF10612 Spore coat protein Z FFE90_006545 PF10612 Spore coat protein Z FFE90_006550 PF07552 Spore Coat Protein X and V domain FFE90_006560 PF07552 Spore Coat Protein X and V domain FFE90_006565 PF07098 Protein of unknown function (DUF1360) FFE90_006580 PF14069 Stage VI sporulation protein F FFE90_006585 PF13361 UvrD-like helicase C-terminal domain FFE90_006585 PF00580 UvrD/REP helicase N-terminal domain FFE90_006595 PF13673 Acetyltransferase (GNAT) domain FFE90_006605 PF00756 Putative esterase FFE90_006610 PF01053 Cys/Met metabolism PLP-dependent enzyme FFE90_006615 PF01053 Cys/Met metabolism PLP-dependent enzyme FFE90_006620 PF13302 Acetyltransferase (GNAT) domain FFE90_006625 PF05684 Protein of unknown function (DUF819) FFE90_006635 PF12671 Putative amidase domain FFE90_006665 PF09639 YjcQ protein FFE90_006670 PF10668 Phage terminase small subunit FFE90_006675 PF03992 Antibiotic biosynthesis monooxygenase FFE90_006685 PF02368 Bacterial Ig-like domain (group 2) FFE90_006690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE90_006690 PF00874 PRD domain FFE90_006690 PF05043 Mga helix-turn-helix domain FFE90_006690 PF08279 HTH domain FFE90_006695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE90_006695 PF02378 Phosphotransferase system, EIIC FFE90_006695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE90_006700 PF01238 Phosphomannose isomerase type I FFE90_006705 PF11208 Protein of unknown function (DUF2992) FFE90_006710 PF13302 Acetyltransferase (GNAT) domain FFE90_006720 PF04073 Aminoacyl-tRNA editing domain FFE90_006725 PF13783 Domain of unknown function (DUF4177) FFE90_006730 PF14154 Domain of unknown function (DUF4306) FFE90_006740 PF01040 UbiA prenyltransferase family FFE90_006750 PF13739 Deacetylase PdaC FFE90_006750 PF01522 Polysaccharide deacetylase FFE90_006750 PF11738 Protein of unknown function (DUF3298) FFE90_006755 PF10901 Protein of unknown function (DUF2690) FFE90_006760 PF14070 Putative motility protein FFE90_006765 PF10026 Predicted Zn-dependent protease (DUF2268) FFE90_006770 PF10990 Protein of unknown function (DUF2809) FFE90_006775 PF14172 Domain of unknown function (DUF4309) FFE90_006780 PF12838 4Fe-4S dicluster domain FFE90_006780 PF01568 Molydopterin dinucleotide binding domain FFE90_006780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE90_006780 PF00384 Molybdopterin oxidoreductase FFE90_006780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FFE90_006785 PF07849 Protein of unknown function (DUF1641) FFE90_006790 PF11611 Domain of unknown function (DUF4352) FFE90_006795 PF00293 NUDIX domain FFE90_006805 PF00067 Cytochrome P450 FFE90_006810 PF04101 Glycosyltransferase family 28 C-terminal domain FFE90_006820 PF02602 Uroporphyrinogen-III synthase HemD FFE90_006825 PF03649 Uncharacterised protein family (UPF0014) FFE90_006830 PF00005 ABC transporter FFE90_006835 PF13536 Putative multidrug resistance efflux transporter FFE90_006845 PF07849 Protein of unknown function (DUF1641) FFE90_006850 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_006855 PF02614 Glucuronate isomerase FFE90_006865 PF02615 Malate/L-lactate dehydrogenase FFE90_006870 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_006870 PF00107 Zinc-binding dehydrogenase FFE90_006875 PF03786 D-mannonate dehydratase (UxuA) FFE90_006880 PF00106 short chain dehydrogenase FFE90_006885 PF07690 Major Facilitator Superfamily FFE90_006890 PF00356 Bacterial regulatory proteins, lacI family FFE90_006895 PF01232 Mannitol dehydrogenase Rossmann domain FFE90_006895 PF08125 Mannitol dehydrogenase C-terminal domain FFE90_006900 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FFE90_006900 PF08666 SAF domain FFE90_006905 PF01925 Sulfite exporter TauE/SafE FFE90_006910 PF05163 DinB family FFE90_006915 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_006920 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_006930 PF03795 YCII-related domain FFE90_006935 PF01471 Putative peptidoglycan binding domain FFE90_006935 PF01476 LysM domain FFE90_006935 PF01510 N-acetylmuramoyl-L-alanine amidase FFE90_006940 PF08000 Bacterial PH domain FFE90_006945 PF05908 Poly-gamma-glutamate hydrolase FFE90_006950 PF05067 Manganese containing catalase FFE90_006955 PF06114 IrrE N-terminal-like domain FFE90_006960 PF01381 Helix-turn-helix FFE90_006975 PF01695 IstB-like ATP binding protein FFE90_006995 PF08281 Sigma-70, region 4 FFE90_007000 PF10668 Phage terminase small subunit FFE90_007000 PF03592 Terminase small subunit FFE90_007005 PF04466 Phage terminase large subunit FFE90_007005 PF17288 Terminase RNAseH like domain FFE90_007010 PF04860 Phage portal protein FFE90_007015 PF14550 Putative phage serine protease XkdF FFE90_007020 PF05065 Phage capsid family FFE90_007025 PF11436 Protein of unknown function (DUF3199) FFE90_007030 PF12206 Domain of unknown function (DUF3599) FFE90_007035 PF04883 Bacteriophage HK97-gp10, putative tail-component FFE90_007050 PF17482 Phage tail sheath C-terminal domain FFE90_007050 PF04984 Phage tail sheath protein subtilisin-like domain FFE90_007050 PF17481 Phage tail sheath protein beta-sandwich domain FFE90_007055 PF09393 Phage tail tube protein FFE90_007060 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC FFE90_007070 PF01464 Transglycosylase SLT domain FFE90_007075 PF01476 LysM domain FFE90_007085 PF10844 Protein of unknown function (DUF2577) FFE90_007090 PF10934 Protein of unknown function (DUF2634) FFE90_007095 PF04865 Baseplate J-like protein FFE90_007100 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) FFE90_007115 PF09636 XkdW protein FFE90_007120 PF09693 Phage uncharacterised protein (Phage_XkdX) FFE90_007130 PF10779 Haemolysin XhlA FFE90_007135 PF04688 SPP1 phage holin FFE90_007140 PF01476 LysM domain FFE90_007140 PF01471 Putative peptidoglycan binding domain FFE90_007140 PF01510 N-acetylmuramoyl-L-alanine amidase FFE90_007150 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system FFE90_007155 PF14171 Toxin SpoIISA, type II toxin-antitoxin system FFE90_007160 PF01384 Phosphate transporter family FFE90_007165 PF01865 Protein of unknown function DUF47 FFE90_007170 PF13520 Amino acid permease FFE90_007175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_007185 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FFE90_007190 PF00535 Glycosyl transferase family 2 FFE90_007195 PF13180 PDZ domain FFE90_007200 PF14748 Pyrroline-5-carboxylate reductase dimerisation FFE90_007200 PF03807 NADP oxidoreductase coenzyme F420-dependent FFE90_007205 PF04951 D-aminopeptidase FFE90_007210 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_007215 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_007215 PF12911 N-terminal TM domain of oligopeptide transport permease C FFE90_007220 PF00005 ABC transporter FFE90_007220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE90_007225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFE90_007230 PF02016 LD-carboxypeptidase N-terminal domain FFE90_007230 PF17676 LD-carboxypeptidase C-terminal domain FFE90_007235 PF13378 Enolase C-terminal domain-like FFE90_007235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFE90_007240 PF00877 NlpC/P60 family FFE90_007245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFE90_007245 PF00005 ABC transporter FFE90_007250 PF10282 Lactonase, 7-bladed beta-propeller FFE90_007260 PF03061 Thioesterase superfamily FFE90_007265 PF00175 Oxidoreductase NAD-binding domain FFE90_007265 PF00042 Globin FFE90_007265 PF00970 Oxidoreductase FAD-binding domain FFE90_007275 PF04239 Protein of unknown function (DUF421) FFE90_007280 PF12867 DinB superfamily FFE90_007285 PF13302 Acetyltransferase (GNAT) domain FFE90_007290 PF00893 Small Multidrug Resistance protein FFE90_007295 PF00893 Small Multidrug Resistance protein FFE90_007300 PF01842 ACT domain FFE90_007300 PF00551 Formyl transferase FFE90_007305 PF00696 Amino acid kinase family FFE90_007305 PF01472 PUA domain FFE90_007310 PF00171 Aldehyde dehydrogenase family FFE90_007315 PF02566 OsmC-like protein FFE90_007320 PF01047 MarR family FFE90_007325 PF02566 OsmC-like protein FFE90_007335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFE90_007340 PF08267 Cobalamin-independent synthase, N-terminal domain FFE90_007340 PF01717 Cobalamin-independent synthase, Catalytic domain FFE90_007345 PF00082 Subtilase family FFE90_007350 PF01740 STAS domain FFE90_007355 PF02361 Cobalt transport protein FFE90_007360 PF00005 ABC transporter FFE90_007365 PF09819 ABC-type cobalt transport system, permease component FFE90_007370 PF07615 YKOF-related Family FFE90_007375 PF00486 Transcriptional regulatory protein, C terminal FFE90_007375 PF00072 Response regulator receiver domain FFE90_007380 PF00672 HAMP domain FFE90_007380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_007380 PF00512 His Kinase A (phospho-acceptor) domain FFE90_007385 PF03413 Peptidase propeptide and YPEB domain FFE90_007390 PF03413 Peptidase propeptide and YPEB domain FFE90_007395 PF11132 Transcriptional regulator protein (SplA) FFE90_007405 PF00571 CBS domain FFE90_007405 PF01769 Divalent cation transporter FFE90_007405 PF03448 MgtE intracellular N domain FFE90_007410 PF13411 MerR HTH family regulatory protein FFE90_007425 PF01047 MarR family FFE90_007430 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FFE90_007440 PF00149 Calcineurin-like phosphoesterase FFE90_007450 PF00535 Glycosyl transferase family 2 FFE90_007455 PF01068 ATP dependent DNA ligase domain FFE90_007460 PF02735 Ku70/Ku80 beta-barrel domain FFE90_007465 PF03707 Bacterial signalling protein N terminal repeat FFE90_007465 PF00990 Diguanylate cyclase, GGDEF domain FFE90_007465 PF00563 EAL domain FFE90_007470 PF09335 SNARE associated Golgi protein FFE90_007475 PF03741 Integral membrane protein TerC family FFE90_007480 PF04542 Sigma-70 region 2 FFE90_007485 PF12791 Anti-sigma factor N-terminus FFE90_007490 PF00269 Small, acid-soluble spore proteins, alpha/beta type FFE90_007495 PF08876 Domain of unknown function (DUF1836) FFE90_007500 PF01435 Peptidase family M48 FFE90_007505 PF02386 Cation transport protein FFE90_007520 PF01757 Acyltransferase family FFE90_007525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_007525 PF00989 PAS fold FFE90_007525 PF13188 PAS domain FFE90_007525 PF13426 PAS domain FFE90_007525 PF00512 His Kinase A (phospho-acceptor) domain FFE90_007530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FFE90_007530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FFE90_007540 PF01008 Initiation factor 2 subunit family FFE90_007545 PF01636 Phosphotransferase enzyme family FFE90_007550 PF00795 Carbon-nitrogen hydrolase FFE90_007555 PF00155 Aminotransferase class I and II FFE90_007560 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain FFE90_007560 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain FFE90_007570 PF00596 Class II Aldolase and Adducin N-terminal domain FFE90_007575 PF03079 ARD/ARD' family FFE90_007580 PF06803 Protein of unknown function (DUF1232) FFE90_007585 PF09388 Spo0E like sporulation regulatory protein FFE90_007595 PF00512 His Kinase A (phospho-acceptor) domain FFE90_007595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_007595 PF02743 Cache domain FFE90_007600 PF01047 MarR family FFE90_007605 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFE90_007605 PF00691 OmpA family FFE90_007610 PF01618 MotA/TolQ/ExbB proton channel family FFE90_007615 PF10431 C-terminal, D2-small domain, of ClpB protein FFE90_007615 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_007615 PF07724 AAA domain (Cdc48 subfamily) FFE90_007615 PF17871 AAA lid domain FFE90_007625 PF06508 Queuosine biosynthesis protein QueC FFE90_007630 PF01242 6-pyruvoyl tetrahydropterin synthase FFE90_007635 PF04055 Radical SAM superfamily FFE90_007640 PF14489 QueF-like protein FFE90_007645 PF01638 HxlR-like helix-turn-helix FFE90_007655 PF01476 LysM domain FFE90_007660 PF01476 LysM domain FFE90_007670 PF11514 Protein of unknown function (DUF3219) FFE90_007675 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) FFE90_007685 PF07486 Cell Wall Hydrolase FFE90_007690 PF01943 Polysaccharide biosynthesis protein FFE90_007695 PF00578 AhpC/TSA family FFE90_007710 PF00557 Metallopeptidase family M24 FFE90_007710 PF01321 Creatinase/Prolidase N-terminal domain FFE90_007715 PF00356 Bacterial regulatory proteins, lacI family FFE90_007715 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFE90_007720 PF03123 CAT RNA binding domain FFE90_007720 PF00874 PRD domain FFE90_007725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE90_007725 PF02378 Phosphotransferase system, EIIC FFE90_007725 PF00367 phosphotransferase system, EIIB FFE90_007730 PF00381 PTS HPr component phosphorylation site FFE90_007735 PF02896 PEP-utilising enzyme, TIM barrel domain FFE90_007735 PF05524 PEP-utilising enzyme, N-terminal FFE90_007735 PF00391 PEP-utilising enzyme, mobile domain FFE90_007740 PF11132 Transcriptional regulator protein (SplA) FFE90_007750 PF00583 Acetyltransferase (GNAT) family FFE90_007755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_007755 PF02743 Cache domain FFE90_007755 PF00672 HAMP domain FFE90_007760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFE90_007760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFE90_007765 PF00188 Cysteine-rich secretory protein family FFE90_007770 PF03717 Penicillin-binding Protein dimerisation domain FFE90_007770 PF00905 Penicillin binding protein transpeptidase domain FFE90_007775 PF08447 PAS fold FFE90_007775 PF00989 PAS fold FFE90_007775 PF00512 His Kinase A (phospho-acceptor) domain FFE90_007775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_007780 PF00155 Aminotransferase class I and II FFE90_007790 PF00072 Response regulator receiver domain FFE90_007790 PF01584 CheW-like domain FFE90_007795 PF14177 YkyB-like protein FFE90_007800 PF07690 Major Facilitator Superfamily FFE90_007805 PF01476 LysM domain FFE90_007805 PF03734 L,D-transpeptidase catalytic domain FFE90_007810 PF00149 Calcineurin-like phosphoesterase FFE90_007810 PF10518 TAT (twin-arginine translocation) pathway signal sequence FFE90_007820 PF08924 Domain of unknown function (DUF1906) FFE90_007820 PF01471 Putative peptidoglycan binding domain FFE90_007835 PF10388 EAL-domain associated signalling protein domain FFE90_007835 PF00563 EAL domain FFE90_007840 PF08796 Protein of unknown function (DUF1797) FFE90_007845 PF04308 Ribonuclease H-like FFE90_007850 PF14156 Antirepressor AbbA FFE90_007860 PF03466 LysR substrate binding domain FFE90_007860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_007865 PF00258 Flavodoxin FFE90_007875 PF00258 Flavodoxin FFE90_007880 PF00132 Bacterial transferase hexapeptide (six repeats) FFE90_007880 PF14602 Hexapeptide repeat of succinyl-transferase FFE90_007880 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FFE90_007885 PF01546 Peptidase family M20/M25/M40 FFE90_007885 PF07687 Peptidase dimerisation domain FFE90_007890 PF03698 Uncharacterised protein family (UPF0180) FFE90_007895 PF00924 Mechanosensitive ion channel FFE90_007900 PF10417 C-terminal domain of 1-Cys peroxiredoxin FFE90_007900 PF00578 AhpC/TSA family FFE90_007905 PF00578 AhpC/TSA family FFE90_007920 PF12804 MobA-like NTP transferase domain FFE90_007925 PF00899 ThiF family FFE90_007930 PF03454 MoeA C-terminal region (domain IV) FFE90_007930 PF03453 MoeA N-terminal region (domain I and II) FFE90_007930 PF00994 Probable molybdopterin binding domain FFE90_007935 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FFE90_007940 PF02391 MoaE protein FFE90_007945 PF02597 ThiS family FFE90_007950 PF00005 ABC transporter FFE90_007950 PF00664 ABC transporter transmembrane region FFE90_007955 PF00005 ABC transporter FFE90_007955 PF00664 ABC transporter transmembrane region FFE90_007960 PF04893 Yip1 domain FFE90_007965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE90_007970 PF00005 ABC transporter FFE90_007975 PF02687 FtsX-like permease family FFE90_007975 PF12704 MacB-like periplasmic core domain FFE90_007980 PF00455 DeoR C terminal sensor domain FFE90_007980 PF08220 DeoR-like helix-turn-helix domain FFE90_007985 PF00294 pfkB family carbohydrate kinase FFE90_007990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE90_007990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE90_007995 PF10502 Signal peptidase, peptidase S26 FFE90_008005 PF00005 ABC transporter FFE90_008005 PF12848 ABC transporter FFE90_008010 PF08546 Ketopantoate reductase PanE/ApbA C terminal FFE90_008010 PF02558 Ketopantoate reductase PanE/ApbA FFE90_008015 PF02073 Thermophilic metalloprotease (M29) FFE90_008020 PF17447 Uncharacterized YkpC-like FFE90_008030 PF18277 AbrB C-terminal domain FFE90_008030 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FFE90_008035 PF00989 PAS fold FFE90_008035 PF00512 His Kinase A (phospho-acceptor) domain FFE90_008035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_008040 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FFE90_008045 PF02254 TrkA-N domain FFE90_008045 PF02080 TrkA-C domain FFE90_008050 PF01979 Amidohydrolase family FFE90_008050 PF13382 Adenine deaminase C-terminal domain FFE90_008055 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FFE90_008055 PF00753 Metallo-beta-lactamase superfamily FFE90_008055 PF17770 Ribonuclease J C-terminal domain FFE90_008070 PF01327 Polypeptide deformylase FFE90_008080 PF10368 Putative cell-wall binding lipoprotein FFE90_008085 PF00676 Dehydrogenase E1 component FFE90_008090 PF02779 Transketolase, pyrimidine binding domain FFE90_008090 PF02780 Transketolase, C-terminal domain FFE90_008095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FFE90_008095 PF02817 e3 binding domain FFE90_008095 PF00364 Biotin-requiring enzyme FFE90_008100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_008100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFE90_008110 PF13790 SR1 protein FFE90_008115 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FFE90_008115 PF01276 Orn/Lys/Arg decarboxylase, major domain FFE90_008120 PF05256 Uncharacterised protein family (UPF0223) FFE90_008125 PF06335 Protein of unknown function (DUF1054) FFE90_008135 PF00459 Inositol monophosphatase family FFE90_008140 PF00583 Acetyltransferase (GNAT) family FFE90_008145 PF04072 Leucine carboxyl methyltransferase FFE90_008150 PF03413 Peptidase propeptide and YPEB domain FFE90_008150 PF07504 Fungalysin/Thermolysin Propeptide Motif FFE90_008150 PF02868 Thermolysin metallopeptidase, alpha-helical domain FFE90_008150 PF01447 Thermolysin metallopeptidase, catalytic domain FFE90_008165 PF04542 Sigma-70 region 2 FFE90_008165 PF08281 Sigma-70, region 4 FFE90_008170 PF13490 Putative zinc-finger FFE90_008180 PF17259 Family of unknown function (DUF5325) FFE90_008190 PF14036 YlaH-like protein FFE90_008195 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) FFE90_008200 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FFE90_008205 PF13638 PIN domain FFE90_008205 PF02562 PhoH-like protein FFE90_008215 PF04960 Glutaminase FFE90_008220 PF07408 Protein of unknown function (DUF1507) FFE90_008225 PF01098 Cell cycle protein FFE90_008230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFE90_008230 PF02436 Conserved carboxylase domain FFE90_008230 PF00682 HMGL-like FFE90_008230 PF00364 Biotin-requiring enzyme FFE90_008230 PF00289 Biotin carboxylase, N-terminal domain FFE90_008230 PF02785 Biotin carboxylase C-terminal domain FFE90_008235 PF02628 Cytochrome oxidase assembly protein FFE90_008240 PF01040 UbiA prenyltransferase family FFE90_008245 PF00034 Cytochrome c FFE90_008245 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FFE90_008245 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FFE90_008250 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFE90_008255 PF00510 Cytochrome c oxidase subunit III FFE90_008260 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FFE90_008265 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) FFE90_008270 PF08868 YugN-like family FFE90_008275 PF00571 CBS domain FFE90_008280 PF14504 CAP-associated N-terminal FFE90_008280 PF00188 Cysteine-rich secretory protein family FFE90_008285 PF14071 Putative coat protein FFE90_008290 PF14003 YlbE-like protein FFE90_008295 PF06133 Control of competence regulator ComK, YlbF/YmcA FFE90_008300 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) FFE90_008310 PF01467 Cytidylyltransferase-like FFE90_008315 PF07670 Nucleoside recognition FFE90_008320 PF01734 Patatin-like phospholipase FFE90_008325 PF05362 Lon protease (S16) C-terminal proteolytic domain FFE90_008325 PF13180 PDZ domain FFE90_008330 PF05636 HIGH Nucleotidyl Transferase FFE90_008340 PF02620 Large ribosomal RNA subunit accumulation protein YceD FFE90_008345 PF01783 Ribosomal L32p protein family FFE90_008355 PF00583 Acetyltransferase (GNAT) family FFE90_008360 PF02558 Ketopantoate reductase PanE/ApbA FFE90_008360 PF08546 Ketopantoate reductase PanE/ApbA C terminal FFE90_008365 PF10079 Bacillithiol biosynthesis BshC FFE90_008370 PF02381 MraZ protein, putative antitoxin-like FFE90_008375 PF01795 MraW methylase family FFE90_008390 PF03793 PASTA domain FFE90_008390 PF00905 Penicillin binding protein transpeptidase domain FFE90_008390 PF03717 Penicillin-binding Protein dimerisation domain FFE90_008395 PF01225 Mur ligase family, catalytic domain FFE90_008395 PF08245 Mur ligase middle domain FFE90_008395 PF02875 Mur ligase family, glutamate ligase domain FFE90_008400 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FFE90_008400 PF00953 Glycosyl transferase family 4 FFE90_008405 PF08245 Mur ligase middle domain FFE90_008405 PF02875 Mur ligase family, glutamate ligase domain FFE90_008410 PF01098 Cell cycle protein FFE90_008415 PF04101 Glycosyltransferase family 28 C-terminal domain FFE90_008415 PF03033 Glycosyltransferase family 28 N-terminal domain FFE90_008420 PF01565 FAD binding domain FFE90_008420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FFE90_008425 PF08478 POTRA domain, FtsQ-type FFE90_008430 PF05949 Bacterial protein of unknown function (DUF881) FFE90_008435 PF05949 Bacterial protein of unknown function (DUF881) FFE90_008440 PF06947 Protein of unknown function (DUF1290) FFE90_008445 PF02491 SHS2 domain inserted in FTSA FFE90_008450 PF00091 Tubulin/FtsZ family, GTPase domain FFE90_008450 PF12327 FtsZ family, C-terminal domain FFE90_008455 PF05922 Peptidase inhibitor I9 FFE90_008455 PF00082 Subtilase family FFE90_008460 PF03419 Sporulation factor SpoIIGA FFE90_008465 PF04542 Sigma-70 region 2 FFE90_008465 PF04545 Sigma-70, region 4 FFE90_008470 PF04545 Sigma-70, region 4 FFE90_008470 PF04542 Sigma-70 region 2 FFE90_008470 PF04539 Sigma-70 region 3 FFE90_008475 PF00005 ABC transporter FFE90_008480 PF07687 Peptidase dimerisation domain FFE90_008480 PF01546 Peptidase family M20/M25/M40 FFE90_008485 PF05239 PRC-barrel domain FFE90_008495 PF01168 Alanine racemase, N-terminal domain FFE90_008500 PF04472 Cell division protein SepF FFE90_008505 PF02325 YGGT family FFE90_008510 PF01479 S4 domain FFE90_008510 PF17774 Putative RNA-binding domain in YlmH FFE90_008515 PF05103 DivIVA protein FFE90_008520 PF00133 tRNA synthetases class I (I, L, M and V) FFE90_008520 PF08264 Anticodon-binding domain of tRNA FFE90_008525 PF01258 Prokaryotic dksA/traR C4-type zinc finger FFE90_008530 PF01252 Signal peptidase (SPase) II FFE90_008535 PF00849 RNA pseudouridylate synthase FFE90_008535 PF01479 S4 domain FFE90_008540 PF00156 Phosphoribosyl transferase domain FFE90_008545 PF00860 Permease family FFE90_008550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFE90_008550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFE90_008555 PF01979 Amidohydrolase family FFE90_008560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FFE90_008560 PF00117 Glutamine amidotransferase class-I FFE90_008565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFE90_008565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FFE90_008565 PF02142 MGS-like domain FFE90_008570 PF00175 Oxidoreductase NAD-binding domain FFE90_008570 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FFE90_008575 PF01180 Dihydroorotate dehydrogenase FFE90_008580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FFE90_008585 PF00156 Phosphoribosyl transferase domain FFE90_008590 PF01507 Phosphoadenosine phosphosulfate reductase family FFE90_008595 PF01384 Phosphate transporter family FFE90_008600 PF01747 ATP-sulfurylase FFE90_008600 PF14306 PUA-like domain FFE90_008610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFE90_008615 PF01903 CbiX FFE90_008630 PF00690 Cation transporter/ATPase, N-terminus FFE90_008630 PF00689 Cation transporting ATPase, C-terminus FFE90_008635 PF03755 YicC-like family, N-terminal region FFE90_008635 PF08340 Domain of unknown function (DUF1732) FFE90_008640 PF04025 Domain of unknown function (DUF370) FFE90_008645 PF00625 Guanylate kinase FFE90_008650 PF01192 RNA polymerase Rpb6 FFE90_008655 PF02441 Flavoprotein FFE90_008655 PF04127 DNA / pantothenate metabolism flavoprotein FFE90_008660 PF18074 Primosomal protein N C-terminal domain FFE90_008660 PF00271 Helicase conserved C-terminal domain FFE90_008660 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FFE90_008660 PF17764 3′ DNA-binding domain (3′BD) FFE90_008660 PF04851 Type III restriction enzyme, res subunit FFE90_008665 PF01327 Polypeptide deformylase FFE90_008670 PF00551 Formyl transferase FFE90_008670 PF02911 Formyl transferase, C-terminal domain FFE90_008675 PF01189 16S rRNA methyltransferase RsmB/F FFE90_008675 PF01029 NusB family FFE90_008680 PF04055 Radical SAM superfamily FFE90_008690 PF00069 Protein kinase domain FFE90_008690 PF03793 PASTA domain FFE90_008695 PF16745 RsgA N-terminal domain FFE90_008695 PF03193 RsgA GTPase FFE90_008700 PF00834 Ribulose-phosphate 3 epimerase family FFE90_008705 PF04263 Thiamin pyrophosphokinase, catalytic domain FFE90_008705 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain FFE90_008710 PF08183 Stage V sporulation protein family FFE90_008715 PF00830 Ribosomal L28 family FFE90_008720 PF03780 Asp23 family, cell envelope-related function FFE90_008725 PF02734 DAK2 domain FFE90_008725 PF13684 Dihydroxyacetone kinase family FFE90_008730 PF03315 Serine dehydratase beta chain FFE90_008730 PF01842 ACT domain FFE90_008735 PF03313 Serine dehydratase alpha chain FFE90_008740 PF00271 Helicase conserved C-terminal domain FFE90_008740 PF17191 RecG wedge domain FFE90_008740 PF00270 DEAD/DEAH box helicase FFE90_008745 PF03061 Thioesterase superfamily FFE90_008750 PF02504 Fatty acid synthesis protein FFE90_008755 PF00698 Acyl transferase domain FFE90_008765 PF00550 Phosphopantetheine attachment site FFE90_008770 PF00035 Double-stranded RNA binding motif FFE90_008770 PF14622 Ribonuclease-III-like FFE90_008775 PF02463 RecF/RecN/SMC N terminal domain FFE90_008775 PF06470 SMC proteins Flexible Hinge Domain FFE90_008780 PF00448 SRP54-type protein, GTPase domain FFE90_008780 PF02881 SRP54-type protein, helical bundle domain FFE90_008785 PF02369 Bacterial Ig-like domain (group 1) FFE90_008790 PF04297 Putative helix-turn-helix protein, YlxM / p13 like FFE90_008795 PF00448 SRP54-type protein, GTPase domain FFE90_008795 PF02881 SRP54-type protein, helical bundle domain FFE90_008795 PF02978 Signal peptide binding domain FFE90_008800 PF00886 Ribosomal protein S16 FFE90_008810 PF11068 YlqD protein FFE90_008815 PF01782 RimM N-terminal domain FFE90_008815 PF05239 PRC-barrel domain FFE90_008820 PF01746 tRNA (Guanine-1)-methyltransferase FFE90_008825 PF01245 Ribosomal protein L19 FFE90_008830 PF01926 50S ribosome-binding GTPase FFE90_008835 PF01351 Ribonuclease HII FFE90_008845 PF01312 FlhB HrpN YscU SpaS Family FFE90_008850 PF00549 CoA-ligase FFE90_008850 PF08442 ATP-grasp domain FFE90_008855 PF00549 CoA-ligase FFE90_008855 PF02629 CoA binding domain FFE90_008860 PF02481 DNA recombination-mediator protein A FFE90_008865 PF01751 Toprim domain FFE90_008865 PF01396 Topoisomerase DNA binding C4 zinc finger FFE90_008865 PF01131 DNA topoisomerase FFE90_008870 PF01134 Glucose inhibited division protein A FFE90_008875 PF00589 Phage integrase family FFE90_008875 PF02899 Phage integrase, N-terminal SAM-like domain FFE90_008880 PF00227 Proteasome subunit FFE90_008885 PF10431 C-terminal, D2-small domain, of ClpB protein FFE90_008885 PF07724 AAA domain (Cdc48 subfamily) FFE90_008885 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_008890 PF06018 CodY GAF-like domain FFE90_008890 PF08222 CodY helix-turn-helix domain FFE90_008895 PF00460 Flagella basal body rod protein FFE90_008900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE90_008900 PF00460 Flagella basal body rod protein FFE90_008905 PF02049 Flagellar hook-basal body complex protein FliE FFE90_008910 PF08345 Flagellar M-ring protein C-terminal FFE90_008910 PF01514 Secretory protein of YscJ/FliF family FFE90_008915 PF14842 FliG N-terminal domain FFE90_008915 PF01706 FliG C-terminal domain FFE90_008915 PF14841 FliG middle domain FFE90_008920 PF02108 Flagellar assembly protein FliH FFE90_008925 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFE90_008925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE90_008925 PF18269 T3SS EscN ATPase C-terminal domain FFE90_008930 PF02050 Flagellar FliJ protein FFE90_008935 PF03448 MgtE intracellular N domain FFE90_008940 PF02120 Flagellar hook-length control protein FliK FFE90_008945 PF03963 Flagellar hook capping protein - N-terminal region FFE90_008950 PF00460 Flagella basal body rod protein FFE90_008950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE90_008955 PF06289 Flagellar and Swarming motility proteins FFE90_008960 PF03748 Flagellar basal body-associated protein FliL FFE90_008965 PF02154 Flagellar motor switch protein FliM FFE90_008965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFE90_008970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFE90_008970 PF04509 CheC-like family FFE90_008975 PF00072 Response regulator receiver domain FFE90_008980 PF04347 Flagellar biosynthesis protein, FliO FFE90_008985 PF00813 FliP family FFE90_008990 PF01313 Bacterial export proteins, family 3 FFE90_008995 PF01311 Bacterial export proteins, family 1 FFE90_009000 PF01312 FlhB HrpN YscU SpaS Family FFE90_009005 PF00771 FHIPEP family FFE90_009010 PF00448 SRP54-type protein, GTPase domain FFE90_009015 PF10609 NUBPL iron-transfer P-loop NTPase FFE90_009020 PF01339 CheB methylesterase FFE90_009020 PF00072 Response regulator receiver domain FFE90_009025 PF07194 P2 response regulator binding domain FFE90_009025 PF02895 Signal transducing histidine kinase, homodimeric domain FFE90_009025 PF01584 CheW-like domain FFE90_009025 PF01627 Hpt domain FFE90_009025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_009030 PF01584 CheW-like domain FFE90_009035 PF04509 CheC-like family FFE90_009040 PF03975 CheD chemotactic sensory transduction FFE90_009045 PF04542 Sigma-70 region 2 FFE90_009045 PF04539 Sigma-70 region 3 FFE90_009045 PF04545 Sigma-70, region 4 FFE90_009055 PF00318 Ribosomal protein S2 FFE90_009060 PF00889 Elongation factor TS FFE90_009065 PF00696 Amino acid kinase family FFE90_009070 PF01765 Ribosome recycling factor FFE90_009075 PF01255 Putative undecaprenyl diphosphate synthase FFE90_009085 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FFE90_009085 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FFE90_009085 PF13288 DXP reductoisomerase C-terminal domain FFE90_009090 PF17820 PDZ domain FFE90_009090 PF02163 Peptidase family M50 FFE90_009095 PF03129 Anticodon binding domain FFE90_009095 PF04073 Aminoacyl-tRNA editing domain FFE90_009095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFE90_009100 PF02811 PHP domain FFE90_009100 PF00929 Exonuclease FFE90_009100 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFE90_009100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFE90_009100 PF14480 DNA polymerase III polC-type N-terminus I FFE90_009100 PF14579 Helix-hairpin-helix motif FFE90_009100 PF11490 DNA polymerase III polC-type N-terminus II FFE90_009105 PF17384 RimP C-terminal SH3 domain FFE90_009105 PF02576 RimP N-terminal domain FFE90_009110 PF00575 S1 RNA binding domain FFE90_009110 PF08529 NusA N-terminal domain FFE90_009110 PF13184 NusA-like KH domain FFE90_009115 PF04296 Protein of unknown function (DUF448) FFE90_009120 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FFE90_009125 PF11987 Translation-initiation factor 2 FFE90_009125 PF00009 Elongation factor Tu GTP binding domain FFE90_009125 PF04760 Translation initiation factor IF-2, N-terminal region FFE90_009130 PF04456 Protein of unknown function (DUF503) FFE90_009135 PF02033 Ribosome-binding factor A FFE90_009140 PF16198 tRNA pseudouridylate synthase B C-terminal domain FFE90_009140 PF01509 TruB family pseudouridylate synthase (N terminal domain) FFE90_009145 PF01687 Riboflavin kinase FFE90_009145 PF06574 FAD synthetase FFE90_009150 PF00312 Ribosomal protein S15 FFE90_009155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FFE90_009155 PF01138 3' exoribonuclease family, domain 1 FFE90_009155 PF03725 3' exoribonuclease family, domain 2 FFE90_009155 PF00013 KH domain FFE90_009155 PF00575 S1 RNA binding domain FFE90_009160 PF01522 Polysaccharide deacetylase FFE90_009165 PF05193 Peptidase M16 inactive domain FFE90_009165 PF00675 Insulinase (Peptidase family M16) FFE90_009170 PF05239 PRC-barrel domain FFE90_009175 PF16924 Dipicolinate synthase subunit A N-terminal domain FFE90_009175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FFE90_009180 PF02441 Flavoprotein FFE90_009185 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFE90_009185 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFE90_009190 PF13840 ACT domain FFE90_009190 PF00696 Amino acid kinase family FFE90_009195 PF00701 Dihydrodipicolinate synthetase family FFE90_009200 PF17770 Ribonuclease J C-terminal domain FFE90_009200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FFE90_009200 PF00753 Metallo-beta-lactamase superfamily FFE90_009205 PF00574 Clp protease FFE90_009210 PF14035 YlzJ-like protein FFE90_009215 PF01580 FtsK/SpoIIIE family FFE90_009215 PF09397 Ftsk gamma domain FFE90_009215 PF17854 FtsK alpha domain FFE90_009220 PF00392 Bacterial regulatory proteins, gntR family FFE90_009220 PF07702 UTRA domain FFE90_009230 PF05193 Peptidase M16 inactive domain FFE90_009235 PF00675 Insulinase (Peptidase family M16) FFE90_009235 PF05193 Peptidase M16 inactive domain FFE90_009245 PF11588 Protein of unknown function (DUF3243) FFE90_009250 PF11868 Protein of unknown function (DUF3388) FFE90_009255 PF13464 Domain of unknown function (DUF4115) FFE90_009260 PF01066 CDP-alcohol phosphatidyltransferase FFE90_009265 PF00994 Probable molybdopterin binding domain FFE90_009265 PF18146 Damage-inducible protein CinA KH domain FFE90_009265 PF02464 Competence-damaged protein FFE90_009270 PF00154 recA bacterial DNA recombination protein FFE90_009275 PF00144 Beta-lactamase FFE90_009280 PF12072 Domain of unknown function (DUF3552) FFE90_009280 PF00013 KH domain FFE90_009280 PF01966 HD domain FFE90_009285 PF13277 YmdB-like protein FFE90_009290 PF04232 Stage V sporulation protein S (SpoVS) FFE90_009295 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_009295 PF00107 Zinc-binding dehydrogenase FFE90_009300 PF00155 Aminotransferase class I and II FFE90_009305 PF01938 TRAM domain FFE90_009305 PF04055 Radical SAM superfamily FFE90_009305 PF00919 Uncharacterized protein family UPF0004 FFE90_009310 PF06133 Control of competence regulator ComK, YlbF/YmcA FFE90_009315 PF10628 Outer spore coat protein E (CotE) FFE90_009320 PF05190 MutS family domain IV FFE90_009320 PF00488 MutS domain V FFE90_009320 PF05192 MutS domain III FFE90_009320 PF05188 MutS domain II FFE90_009320 PF01624 MutS domain I FFE90_009325 PF01119 DNA mismatch repair protein, C-terminal domain FFE90_009325 PF08676 MutL C terminal dimerisation domain FFE90_009330 PF14184 Regulatory protein YrvL FFE90_009340 PF00440 Bacterial regulatory proteins, tetR family FFE90_009340 PF13977 BetI-type transcriptional repressor, C-terminal FFE90_009345 PF00753 Metallo-beta-lactamase superfamily FFE90_009355 PF00698 Acyl transferase domain FFE90_009360 PF00698 Acyl transferase domain FFE90_009365 PF03060 Nitronate monooxygenase FFE90_009365 PF00698 Acyl transferase domain FFE90_009370 PF00550 Phosphopantetheine attachment site FFE90_009375 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE90_009375 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE90_009380 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal FFE90_009380 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal FFE90_009385 PF00378 Enoyl-CoA hydratase/isomerase FFE90_009390 PF00378 Enoyl-CoA hydratase/isomerase FFE90_009395 PF14765 Polyketide synthase dehydratase FFE90_009395 PF13193 AMP-binding enzyme C-terminal domain FFE90_009395 PF00501 AMP-binding enzyme FFE90_009395 PF00668 Condensation domain FFE90_009395 PF16197 Ketoacyl-synthetase C-terminal extension FFE90_009395 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE90_009395 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE90_009395 PF00550 Phosphopantetheine attachment site FFE90_009395 PF08659 KR domain FFE90_009400 PF16197 Ketoacyl-synthetase C-terminal extension FFE90_009400 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE90_009400 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE90_009400 PF08659 KR domain FFE90_009400 PF00550 Phosphopantetheine attachment site FFE90_009400 PF14765 Polyketide synthase dehydratase FFE90_009405 PF00550 Phosphopantetheine attachment site FFE90_009405 PF14765 Polyketide synthase dehydratase FFE90_009405 PF16197 Ketoacyl-synthetase C-terminal extension FFE90_009405 PF08242 Methyltransferase domain FFE90_009405 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE90_009405 PF08659 KR domain FFE90_009405 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE90_009410 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE90_009410 PF13193 AMP-binding enzyme C-terminal domain FFE90_009410 PF14765 Polyketide synthase dehydratase FFE90_009410 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE90_009410 PF08659 KR domain FFE90_009410 PF16197 Ketoacyl-synthetase C-terminal extension FFE90_009410 PF00550 Phosphopantetheine attachment site FFE90_009410 PF00501 AMP-binding enzyme FFE90_009410 PF00668 Condensation domain FFE90_009415 PF08242 Methyltransferase domain FFE90_009415 PF14765 Polyketide synthase dehydratase FFE90_009415 PF00975 Thioesterase domain FFE90_009415 PF00550 Phosphopantetheine attachment site FFE90_009415 PF02801 Beta-ketoacyl synthase, C-terminal domain FFE90_009415 PF16197 Ketoacyl-synthetase C-terminal extension FFE90_009415 PF00109 Beta-ketoacyl synthase, N-terminal domain FFE90_009420 PF00067 Cytochrome P450 FFE90_009435 PF00082 Subtilase family FFE90_009440 PF05908 Poly-gamma-glutamate hydrolase FFE90_009445 PF02566 OsmC-like protein FFE90_009450 PF00893 Small Multidrug Resistance protein FFE90_009455 PF00893 Small Multidrug Resistance protein FFE90_009465 PF12788 YmaF family FFE90_009475 PF17209 Hfq protein FFE90_009480 PF14157 YmzC-like protein FFE90_009490 PF07972 NrdI Flavodoxin like FFE90_009495 PF02867 Ribonucleotide reductase, barrel domain FFE90_009495 PF08343 Ribonucleotide reductase N-terminal FFE90_009495 PF00317 Ribonucleotide reductase, all-alpha domain FFE90_009500 PF00268 Ribonucleotide reductase, small chain FFE90_009510 PF05036 Sporulation related domain FFE90_009510 PF01520 N-acetylmuramoyl-L-alanine amidase FFE90_009520 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_009520 PF17866 AAA lid domain FFE90_009525 PF13167 GTP-binding GTPase N-terminal FFE90_009525 PF01926 50S ribosome-binding GTPase FFE90_009525 PF16360 GTP-binding GTPase Middle Region FFE90_009530 PF06838 Methionine gamma-lyase FFE90_009535 PF13411 MerR HTH family regulatory protein FFE90_009540 PF00120 Glutamine synthetase, catalytic domain FFE90_009540 PF03951 Glutamine synthetase, beta-Grasp domain FFE90_009570 PF13302 Acetyltransferase (GNAT) domain FFE90_009580 PF13021 Domain of unknown function (DUF3885) FFE90_009610 PF04616 Glycosyl hydrolases family 43 FFE90_009610 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FFE90_009615 PF00480 ROK family FFE90_009620 PF01261 Xylose isomerase-like TIM barrel FFE90_009625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE90_009625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE90_009635 PF00565 Staphylococcal nuclease homologue FFE90_009640 PF00083 Sugar (and other) transporter FFE90_009645 PF01168 Alanine racemase, N-terminal domain FFE90_009645 PF00842 Alanine racemase, C-terminal domain FFE90_009650 PF10903 Protein of unknown function (DUF2691) FFE90_009655 PF00692 dUTPase FFE90_009670 PF00303 Thymidylate synthase FFE90_009680 PF15493 Domain of unknown function, YrpD FFE90_009685 PF14037 YoqO-like protein FFE90_009695 PF02416 mttA/Hcf106 family FFE90_009710 PF08327 Activator of Hsp90 ATPase homolog 1-like protein FFE90_009725 PF03323 Bacillus/Clostridium GerA spore germination protein FFE90_009730 PF03845 Spore germination protein FFE90_009735 PF05504 Spore germination B3/ GerAC like, C-terminal FFE90_009745 PF13761 Domain of unknown function (DUF4166) FFE90_009750 PF14158 YndJ-like protein FFE90_009760 PF05908 Poly-gamma-glutamate hydrolase FFE90_009765 PF10710 Protein of unknown function (DUF2512) FFE90_009770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_009780 PF00717 Peptidase S24-like FFE90_009780 PF01726 LexA DNA binding domain FFE90_009785 PF01476 LysM domain FFE90_009790 PF00239 Resolvase, N terminal domain FFE90_009795 PF05979 Bacterial protein of unknown function (DUF896) FFE90_009800 PF00456 Transketolase, thiamine diphosphate binding domain FFE90_009800 PF02779 Transketolase, pyrimidine binding domain FFE90_009800 PF02780 Transketolase, C-terminal domain FFE90_009805 PF10747 Sporulation inhibitor of replication protein SirA FFE90_009810 PF03672 Uncharacterised protein family (UPF0154) FFE90_009815 PF09388 Spo0E like sporulation regulatory protein FFE90_009820 PF02683 Cytochrome C biogenesis protein transmembrane region FFE90_009825 PF00072 Response regulator receiver domain FFE90_009830 PF07301 Protein of unknown function (DUF1453) FFE90_009835 PF11084 Protein of unknown function (DUF2621) FFE90_009845 PF08179 Small acid-soluble spore protein P family FFE90_009855 PF00330 Aconitase family (aconitate hydratase) FFE90_009855 PF00694 Aconitase C-terminal domain FFE90_009860 PF00578 AhpC/TSA family FFE90_009865 PF13040 Fur-regulated basic protein B FFE90_009870 PF08177 Small acid-soluble spore protein N family FFE90_009880 PF03061 Thioesterase superfamily FFE90_009890 PF01521 Iron-sulphur cluster biosynthesis FFE90_009895 PF02660 Glycerol-3-phosphate acyltransferase FFE90_009900 PF13380 CoA binding domain FFE90_009905 PF00204 DNA gyrase B FFE90_009905 PF01751 Toprim domain FFE90_009905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_009905 PF00986 DNA gyrase B subunit, carboxyl terminus FFE90_009910 PF03989 DNA gyrase C-terminal domain, beta-propeller FFE90_009910 PF00521 DNA gyrase/topoisomerase IV, subunit A FFE90_009920 PF01235 Sodium:alanine symporter family FFE90_009925 PF00150 Cellulase (glycosyl hydrolase family 5) FFE90_009925 PF00942 Cellulose binding domain FFE90_009930 PF17452 Uncharacterized YnfE-like FFE90_009935 PF17189 Glycosyl hydrolase family 30 beta sandwich domain FFE90_009940 PF03422 Carbohydrate binding module (family 6) FFE90_009940 PF04616 Glycosyl hydrolases family 43 FFE90_009950 PF04138 GtrA-like protein FFE90_009955 PF00483 Nucleotidyl transferase FFE90_009960 PF09335 SNARE associated Golgi protein FFE90_009970 PF01039 Carboxyl transferase domain FFE90_009975 PF00378 Enoyl-CoA hydratase/isomerase FFE90_009980 PF00682 HMGL-like FFE90_009985 PF00364 Biotin-requiring enzyme FFE90_009990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFE90_009990 PF00289 Biotin carboxylase, N-terminal domain FFE90_009990 PF02785 Biotin carboxylase C-terminal domain FFE90_009995 PF00501 AMP-binding enzyme FFE90_009995 PF13193 AMP-binding enzyme C-terminal domain FFE90_010000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFE90_010000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFE90_010000 PF02770 Acyl-CoA dehydrogenase, middle domain FFE90_010005 PF17329 Family of unknown function (DUF5367) FFE90_010015 PF02638 Glycosyl hydrolase-like 10 FFE90_010020 PF07098 Protein of unknown function (DUF1360) FFE90_010025 PF00975 Thioesterase domain FFE90_010025 PF00550 Phosphopantetheine attachment site FFE90_010025 PF00668 Condensation domain FFE90_010025 PF00501 AMP-binding enzyme FFE90_010025 PF13193 AMP-binding enzyme C-terminal domain FFE90_010030 PF00550 Phosphopantetheine attachment site FFE90_010030 PF13193 AMP-binding enzyme C-terminal domain FFE90_010030 PF00501 AMP-binding enzyme FFE90_010030 PF00668 Condensation domain FFE90_010035 PF00550 Phosphopantetheine attachment site FFE90_010035 PF00668 Condensation domain FFE90_010035 PF00501 AMP-binding enzyme FFE90_010035 PF13193 AMP-binding enzyme C-terminal domain FFE90_010040 PF00501 AMP-binding enzyme FFE90_010040 PF13193 AMP-binding enzyme C-terminal domain FFE90_010040 PF00668 Condensation domain FFE90_010040 PF00550 Phosphopantetheine attachment site FFE90_010045 PF00501 AMP-binding enzyme FFE90_010045 PF00550 Phosphopantetheine attachment site FFE90_010045 PF13193 AMP-binding enzyme C-terminal domain FFE90_010045 PF00668 Condensation domain FFE90_010050 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FFE90_010055 PF01263 Aldose 1-epimerase FFE90_010060 PF01554 MatE FFE90_010065 PF16800 IseA DL-endopeptidase inhibitor FFE90_010075 PF00589 Phage integrase family FFE90_010080 PF12728 Helix-turn-helix domain FFE90_010090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_010090 PF03466 LysR substrate binding domain FFE90_010095 PF00107 Zinc-binding dehydrogenase FFE90_010095 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_010100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_010100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FFE90_010105 PF01493 GXGXG motif FFE90_010105 PF01645 Conserved region in glutamate synthase FFE90_010105 PF04898 Glutamate synthase central domain FFE90_010105 PF00310 Glutamine amidotransferases class-II FFE90_010110 PF03466 LysR substrate binding domain FFE90_010110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_010115 PF00696 Amino acid kinase family FFE90_010115 PF01472 PUA domain FFE90_010120 PF03807 NADP oxidoreductase coenzyme F420-dependent FFE90_010120 PF14748 Pyrroline-5-carboxylate reductase dimerisation FFE90_010125 PF02334 Replication terminator protein FFE90_010130 PF00106 short chain dehydrogenase FFE90_010135 PF06103 Bacterial protein of unknown function (DUF948) FFE90_010145 PF13302 Acetyltransferase (GNAT) domain FFE90_010150 PF07690 Major Facilitator Superfamily FFE90_010155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE90_010155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE90_010160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE90_010160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE90_010165 PF01568 Molydopterin dinucleotide binding domain FFE90_010165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE90_010165 PF00384 Molybdopterin oxidoreductase FFE90_010175 PF17094 Uncharacterised protein family (UPF0715) FFE90_010190 PF13217 Protein of unknown function (DUF4025) FFE90_010195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_010195 PF00672 HAMP domain FFE90_010195 PF05227 CHASE3 domain FFE90_010200 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FFE90_010200 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FFE90_010205 PF03330 Lytic transglycolase FFE90_010210 PF06912 Protein of unknown function (DUF1275) FFE90_010215 PF00544 Pectate lyase FFE90_010220 PF02586 SOS response associated peptidase (SRAP) FFE90_010230 PF00190 Cupin FFE90_010235 PF16302 Domain of unknown function (DUF4944) FFE90_010245 PF00583 Acetyltransferase (GNAT) family FFE90_010245 PF14268 YoaP-like FFE90_010265 PF04294 VanW like protein FFE90_010270 PF11188 Protein of unknown function (DUF2975) FFE90_010275 PF13443 Cro/C1-type HTH DNA-binding domain FFE90_010280 PF05675 Protein of unknown function (DUF817) FFE90_010285 PF03466 LysR substrate binding domain FFE90_010285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_010290 PF00892 EamA-like transporter family FFE90_010300 PF01965 DJ-1/PfpI family FFE90_010315 PF11518 Protein of unknown function (DUF3221) FFE90_010330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FFE90_010330 PF00391 PEP-utilising enzyme, mobile domain FFE90_010335 PF00457 Glycosyl hydrolases family 11 FFE90_010345 PF05154 TM2 domain FFE90_010350 PF01381 Helix-turn-helix FFE90_010365 PF02586 SOS response associated peptidase (SRAP) FFE90_010405 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_010420 PF08863 YolD-like protein FFE90_010430 PF07693 KAP family P-loop domain FFE90_010455 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH FFE90_010455 PF04740 LXG domain of WXG superfamily FFE90_010460 PF09346 SMI1 / KNR4 family (SUKH-1) FFE90_010465 PF01593 Flavin containing amine oxidoreductase FFE90_010470 PF12708 Pectate lyase superfamily protein FFE90_010470 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain FFE90_010475 PF01588 Putative tRNA binding domain FFE90_010480 PF12833 Helix-turn-helix domain FFE90_010480 PF07883 Cupin domain FFE90_010485 PF00583 Acetyltransferase (GNAT) family FFE90_010490 PF00440 Bacterial regulatory proteins, tetR family FFE90_010490 PF13305 Tetracyclin repressor-like, C-terminal domain FFE90_010495 PF00753 Metallo-beta-lactamase superfamily FFE90_010500 PF06445 GyrI-like small molecule binding domain FFE90_010505 PF08279 HTH domain FFE90_010505 PF13280 WYL domain FFE90_010515 PF01022 Bacterial regulatory protein, arsR family FFE90_010525 PF04238 Protein of unknown function (DUF420) FFE90_010530 PF18846 Bacterial archaeo-eukaryotic release factor family 5 FFE90_010540 PF17676 LD-carboxypeptidase C-terminal domain FFE90_010540 PF02016 LD-carboxypeptidase N-terminal domain FFE90_010545 PF00487 Fatty acid desaturase FFE90_010550 PF07730 Histidine kinase FFE90_010555 PF00196 Bacterial regulatory proteins, luxR family FFE90_010555 PF00072 Response regulator receiver domain FFE90_010560 PF06725 3D domain FFE90_010560 PF01476 LysM domain FFE90_010565 PF09382 RQC domain FFE90_010565 PF00270 DEAD/DEAH box helicase FFE90_010565 PF16124 RecQ zinc-binding FFE90_010565 PF00570 HRDC domain FFE90_010565 PF00271 Helicase conserved C-terminal domain FFE90_010580 PF02525 Flavodoxin-like fold FFE90_010585 PF01258 Prokaryotic dksA/traR C4-type zinc finger FFE90_010600 PF00011 Hsp20/alpha crystallin family FFE90_010615 PF08000 Bacterial PH domain FFE90_010625 PF00171 Aldehyde dehydrogenase family FFE90_010630 PF13243 Squalene-hopene cyclase C-terminal domain FFE90_010630 PF13249 Squalene-hopene cyclase N-terminal domain FFE90_010635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FFE90_010635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FFE90_010640 PF00209 Sodium:neurotransmitter symporter family FFE90_010645 PF01758 Sodium Bile acid symporter family FFE90_010650 PF00364 Biotin-requiring enzyme FFE90_010650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FFE90_010650 PF02817 e3 binding domain FFE90_010655 PF02779 Transketolase, pyrimidine binding domain FFE90_010655 PF16870 2-oxoglutarate dehydrogenase C-terminal FFE90_010655 PF00676 Dehydrogenase E1 component FFE90_010660 PF00092 von Willebrand factor type A domain FFE90_010665 PF07728 AAA domain (dynein-related subfamily) FFE90_010670 PF00080 Copper/zinc superoxide dismutase (SODC) FFE90_010670 PF13627 Prokaryotic lipoprotein-attachment site FFE90_010675 PF00877 NlpC/P60 family FFE90_010675 PF01476 LysM domain FFE90_010680 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase FFE90_010685 PF10372 Bacterial membrane-spanning protein N-terminus FFE90_010685 PF02457 DisA bacterial checkpoint controller nucleotide-binding FFE90_010690 PF01554 MatE FFE90_010695 PF01740 STAS domain FFE90_010700 PF02585 GlcNAc-PI de-N-acetylase FFE90_010705 PF08830 Protein of unknown function (DUF1806) FFE90_010715 PF00892 EamA-like transporter family FFE90_010730 PF02447 GntP family permease FFE90_010735 PF14552 Tautomerase enzyme FFE90_010740 PF01638 HxlR-like helix-turn-helix FFE90_010745 PF00881 Nitroreductase family FFE90_010750 PF01738 Dienelactone hydrolase family FFE90_010755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_010760 PF11755 Protein of unknown function (DUF3311) FFE90_010765 PF00474 Sodium:solute symporter family FFE90_010770 PF01471 Putative peptidoglycan binding domain FFE90_010770 PF17820 PDZ domain FFE90_010770 PF03572 Peptidase family S41 FFE90_010775 PF08241 Methyltransferase domain FFE90_010785 PF02557 D-alanyl-D-alanine carboxypeptidase FFE90_010790 PF01048 Phosphorylase superfamily FFE90_010800 PF14191 YodL-like FFE90_010805 PF01569 PAP2 superfamily FFE90_010810 PF14162 YozD-like protein FFE90_010830 PF06855 YozE SAM-like fold FFE90_010835 PF14122 YokU-like protein, putative antitoxin FFE90_010840 PF12544 Lysine-2,3-aminomutase FFE90_010845 PF00583 Acetyltransferase (GNAT) family FFE90_010850 PF07687 Peptidase dimerisation domain FFE90_010850 PF01546 Peptidase family M20/M25/M40 FFE90_010855 PF01144 Coenzyme A transferase FFE90_010860 PF01144 Coenzyme A transferase FFE90_010865 PF00202 Aminotransferase class-III FFE90_010880 PF00583 Acetyltransferase (GNAT) family FFE90_010885 PF00535 Glycosyl transferase family 2 FFE90_010900 PF12996 DUF based on E. rectale Gene description (DUF3880) FFE90_010905 PF02333 Phytase FFE90_010910 PF08485 Polysaccharide biosynthesis protein C-terminal FFE90_010910 PF02719 Polysaccharide biosynthesis protein FFE90_010925 PF13443 Cro/C1-type HTH DNA-binding domain FFE90_010975 PF00149 Calcineurin-like phosphoesterase FFE90_010980 PF00269 Small, acid-soluble spore proteins, alpha/beta type FFE90_011010 PF06445 GyrI-like small molecule binding domain FFE90_011015 PF00692 dUTPase FFE90_011020 PF00085 Thioredoxin FFE90_011030 PF13392 HNH endonuclease FFE90_011040 PF08343 Ribonucleotide reductase N-terminal FFE90_011040 PF00317 Ribonucleotide reductase, all-alpha domain FFE90_011040 PF02867 Ribonucleotide reductase, barrel domain FFE90_011040 PF14528 LAGLIDADG-like domain FFE90_011045 PF14528 LAGLIDADG-like domain FFE90_011045 PF02867 Ribonucleotide reductase, barrel domain FFE90_011045 PF00317 Ribonucleotide reductase, all-alpha domain FFE90_011045 PF08343 Ribonucleotide reductase N-terminal FFE90_011050 PF07972 NrdI Flavodoxin like FFE90_011140 PF00145 C-5 cytosine-specific DNA methylase FFE90_011150 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) FFE90_011155 PF02223 Thymidylate kinase FFE90_011165 PF09629 YorP protein FFE90_011180 PF06725 3D domain FFE90_011185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFE90_011185 PF14579 Helix-hairpin-helix motif FFE90_011185 PF02811 PHP domain FFE90_011185 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFE90_011190 PF01368 DHH family FFE90_011190 PF17768 RecJ OB domain FFE90_011200 PF03796 DnaB-like helicase C terminal domain FFE90_011225 PF09636 XkdW protein FFE90_011240 PF13229 Right handed beta helix region FFE90_011245 PF05908 Poly-gamma-glutamate hydrolase FFE90_011260 PF02586 SOS response associated peptidase (SRAP) FFE90_011265 PF01068 ATP dependent DNA ligase domain FFE90_011295 PF14037 YoqO-like protein FFE90_011310 PF01844 HNH endonuclease FFE90_011320 PF06908 YspA SLOG family FFE90_011350 PF03374 Phage antirepressor protein KilAC domain FFE90_011350 PF09669 Phage regulatory protein Rha (Phage_pRha) FFE90_011380 PF09643 YopX protein FFE90_011400 PF09467 Hypothetical protein Yopt FFE90_011405 PF13443 Cro/C1-type HTH DNA-binding domain FFE90_011415 PF14072 DNA-sulfur modification-associated FFE90_011420 PF00589 Phage integrase family FFE90_011420 PF02899 Phage integrase, N-terminal SAM-like domain FFE90_011425 PF01381 Helix-turn-helix FFE90_011460 PF14163 Super-infection exclusion protein B FFE90_011490 PF17094 Uncharacterised protein family (UPF0715) FFE90_011495 PF08808 RES domain FFE90_011500 PF13443 Cro/C1-type HTH DNA-binding domain FFE90_011540 PF01381 Helix-turn-helix FFE90_011555 PF00216 Bacterial DNA-binding protein FFE90_011565 PF09642 YonK protein FFE90_011590 PF03237 Terminase-like family FFE90_011675 PF09693 Phage uncharacterised protein (Phage_XkdX) FFE90_011690 PF13495 Phage integrase, N-terminal SAM-like domain FFE90_011690 PF00589 Phage integrase family FFE90_011720 PF01464 Transglycosylase SLT domain FFE90_011720 PF10145 Phage-related minor tail protein FFE90_011720 PF01551 Peptidase family M23 FFE90_011725 PF05709 Phage tail protein FFE90_011730 PF06605 Prophage endopeptidase tail FFE90_011740 PF09992 Phosphodiester glycosidase FFE90_011740 PF12708 Pectate lyase superfamily protein FFE90_011755 PF01510 N-acetylmuramoyl-L-alanine amidase FFE90_011760 PF10960 BhlA holin family FFE90_011765 PF04688 SPP1 phage holin FFE90_011770 PF02600 Disulfide bond formation protein DsbB FFE90_011775 PF00535 Glycosyl transferase family 2 FFE90_011780 PF00085 Thioredoxin FFE90_011785 PF00005 ABC transporter FFE90_011785 PF03412 Peptidase C39 family FFE90_011785 PF00664 ABC transporter transmembrane region FFE90_011795 PF06713 Bacterial PH domain FFE90_011800 PF11798 IMS family HHH motif FFE90_011800 PF00817 impB/mucB/samB family FFE90_011800 PF11799 impB/mucB/samB family C-terminal domain FFE90_011805 PF08863 YolD-like protein FFE90_011820 PF16219 Domain of unknown function (DUF4879) FFE90_011830 PF13302 Acetyltransferase (GNAT) domain FFE90_011840 PF09346 SMI1 / KNR4 family (SUKH-1) FFE90_011845 PF15652 HNH/Endo VII superfamily toxin with a SHH signature FFE90_011845 PF04740 LXG domain of WXG superfamily FFE90_011850 PF09346 SMI1 / KNR4 family (SUKH-1) FFE90_011865 PF05901 Excalibur calcium-binding domain FFE90_011865 PF00565 Staphylococcal nuclease homologue FFE90_011870 PF14470 Bacterial PH domain FFE90_011875 PF02522 Aminoglycoside 3-N-acetyltransferase FFE90_011900 PF07508 Recombinase FFE90_011900 PF00239 Resolvase, N terminal domain FFE90_011905 PF02719 Polysaccharide biosynthesis protein FFE90_011910 PF01641 SelR domain FFE90_011915 PF01625 Peptide methionine sulfoxide reductase FFE90_011920 PF01047 MarR family FFE90_011925 PF01554 MatE FFE90_011930 PF17431 Uncharacterized YmpT-like FFE90_011935 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) FFE90_011940 PF13472 GDSL-like Lipase/Acylhydrolase family FFE90_011945 PF02630 SCO1/SenC FFE90_011950 PF10751 Protein of unknown function (DUF2535) FFE90_011955 PF00291 Pyridoxal-phosphate dependent enzyme FFE90_011955 PF00585 C-terminal regulatory domain of Threonine dehydratase FFE90_011960 PF08461 Ribonuclease R winged-helix domain FFE90_011960 PF00158 Sigma-54 interaction domain FFE90_011965 PF03006 Haemolysin-III related FFE90_011975 PF00186 Dihydrofolate reductase FFE90_011980 PF00303 Thymidylate synthase FFE90_011985 PF04608 Phosphatidylglycerophosphatase A FFE90_011990 PF14005 YpjP-like protein FFE90_011995 PF04445 Putative SAM-dependent methyltransferase FFE90_012000 PF06491 Disulphide isomerase FFE90_012005 PF00920 Dehydratase family FFE90_012010 PF13769 Virulence factor FFE90_012010 PF08712 Scaffold protein Nfu/NifU N terminal FFE90_012015 PF01966 HD domain FFE90_012020 PF00255 Glutathione peroxidase FFE90_012025 PF04204 Homoserine O-succinyltransferase FFE90_012030 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FFE90_012030 PF00534 Glycosyl transferases group 1 FFE90_012040 PF00313 'Cold-shock' DNA-binding domain FFE90_012050 PF10819 Protein of unknown function (DUF2564) FFE90_012055 PF10782 Zinc-finger FFE90_012060 PF13456 Reverse transcriptase-like FFE90_012065 PF02592 Putative vitamin uptake transporter FFE90_012070 PF13456 Reverse transcriptase-like FFE90_012080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FFE90_012080 PF01367 5'-3' exonuclease, C-terminal SAM fold FFE90_012090 PF10752 Protein of unknown function (DUF2533) FFE90_012095 PF00350 Dynamin family FFE90_012105 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family FFE90_012110 PF00195 Chalcone and stilbene synthases, N-terminal domain FFE90_012110 PF02797 Chalcone and stilbene synthases, C-terminal domain FFE90_012115 PF00860 Permease family FFE90_012120 PF00156 Phosphoribosyl transferase domain FFE90_012125 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FFE90_012130 PF03812 2-keto-3-deoxygluconate permease FFE90_012135 PF01081 KDPG and KHG aldolase FFE90_012140 PF00294 pfkB family carbohydrate kinase FFE90_012145 PF00356 Bacterial regulatory proteins, lacI family FFE90_012150 PF04962 KduI/IolB family FFE90_012160 PF13307 Helicase C-terminal domain FFE90_012170 PF14139 YpzG-like protein FFE90_012175 PF02926 THUMP domain FFE90_012175 PF01170 Putative RNA methylase family UPF0020 FFE90_012185 PF05103 DivIVA protein FFE90_012190 PF06908 YspA SLOG family FFE90_012195 PF11122 Inner spore coat protein D FFE90_012205 PF13482 RNase_H superfamily FFE90_012210 PF09369 Domain of unknown function (DUF1998) FFE90_012210 PF00270 DEAD/DEAH box helicase FFE90_012210 PF00271 Helicase conserved C-terminal domain FFE90_012215 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE90_012225 PF14179 YppG-like protein FFE90_012230 PF14178 YppF-like protein FFE90_012235 PF08807 Bacterial domain of unknown function (DUF1798) FFE90_012240 PF17522 Family of unknown function (DUF5446) FFE90_012250 PF10720 Protein of unknown function (DUF2515) FFE90_012255 PF03838 Recombination protein U FFE90_012260 PF00905 Penicillin binding protein transpeptidase domain FFE90_012260 PF00912 Transglycosylase FFE90_012270 PF00730 HhH-GPD superfamily base excision DNA repair protein FFE90_012270 PF00633 Helix-hairpin-helix motif FFE90_012270 PF10576 Iron-sulfur binding domain of endonuclease III FFE90_012275 PF07261 Replication initiation and membrane attachment FFE90_012280 PF00152 tRNA synthetases class II (D, K and N) FFE90_012280 PF01336 OB-fold nucleic acid binding domain FFE90_012285 PF00155 Aminotransferase class I and II FFE90_012290 PF17881 Domain of unknown function (DUF5590) FFE90_012290 PF03413 Peptidase propeptide and YPEB domain FFE90_012295 PF14084 Protein of unknown function (DUF4264) FFE90_012300 PF13307 Helicase C-terminal domain FFE90_012300 PF04851 Type III restriction enzyme, res subunit FFE90_012300 PF00929 Exonuclease FFE90_012305 PF02261 Aspartate decarboxylase FFE90_012310 PF02569 Pantoate-beta-alanine ligase FFE90_012315 PF02548 Ketopantoate hydroxymethyltransferase FFE90_012320 PF02237 Biotin protein ligase C terminal domain FFE90_012320 PF03099 Biotin/lipoate A/B protein ligase family FFE90_012320 PF08279 HTH domain FFE90_012325 PF13735 tRNA nucleotidyltransferase domain 2 putative FFE90_012325 PF12627 Probable RNA and SrmB- binding site of polymerase A FFE90_012325 PF01743 Poly A polymerase head domain FFE90_012330 PF00534 Glycosyl transferases group 1 FFE90_012330 PF13439 Glycosyltransferase Family 4 FFE90_012335 PF02585 GlcNAc-PI de-N-acetylase FFE90_012340 PF02142 MGS-like domain FFE90_012345 PF05173 Dihydrodipicolinate reductase, C-terminus FFE90_012345 PF01113 Dihydrodipicolinate reductase, N-terminus FFE90_012350 PF03819 MazG nucleotide pyrophosphohydrolase domain FFE90_012355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FFE90_012355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FFE90_012360 PF09577 Sporulation protein YpjB (SpoYpjB) FFE90_012365 PF07187 Protein of unknown function (DUF1405) FFE90_012370 PF00032 Cytochrome b(C-terminal)/b6/petD FFE90_012370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFE90_012375 PF00033 Cytochrome b/b6/petB FFE90_012380 PF00355 Rieske [2Fe-2S] domain FFE90_012385 PF10673 Protein of unknown function (DUF2487) FFE90_012390 PF08864 UPF0302 domain FFE90_012390 PF08858 IDEAL domain FFE90_012400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFE90_012405 PF01842 ACT domain FFE90_012405 PF02153 Prephenate dehydrogenase FFE90_012410 PF00155 Aminotransferase class I and II FFE90_012415 PF00290 Tryptophan synthase alpha chain FFE90_012420 PF00291 Pyridoxal-phosphate dependent enzyme FFE90_012425 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FFE90_012430 PF00218 Indole-3-glycerol phosphate synthase FFE90_012435 PF00591 Glycosyl transferase family, a/b domain FFE90_012435 PF02885 Glycosyl transferase family, helical bundle domain FFE90_012440 PF04715 Anthranilate synthase component I, N terminal region FFE90_012440 PF00425 chorismate binding enzyme FFE90_012445 PF07736 Chorismate mutase type I FFE90_012450 PF01761 3-dehydroquinate synthase FFE90_012455 PF01264 Chorismate synthase FFE90_012460 PF03705 CheR methyltransferase, all-alpha domain FFE90_012460 PF01739 CheR methyltransferase, SAM binding domain FFE90_012465 PF00334 Nucleoside diphosphate kinase FFE90_012470 PF00348 Polyprenyl synthetase FFE90_012475 PF01209 ubiE/COQ5 methyltransferase family FFE90_012480 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 FFE90_012485 PF02081 Tryptophan RNA-binding attenuator protein FFE90_012490 PF01227 GTP cyclohydrolase I FFE90_012495 PF00216 Bacterial DNA-binding protein FFE90_012500 PF09547 Stage IV sporulation protein A (spore_IV_A) FFE90_012510 PF10966 Protein of unknown function (DUF2768) FFE90_012515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FFE90_012515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FFE90_012520 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FFE90_012520 PF01926 50S ribosome-binding GTPase FFE90_012530 PF14045 YIEGIA protein FFE90_012540 PF14140 YpzI-like protein FFE90_012545 PF01070 FMN-dependent dehydrogenase FFE90_012550 PF00575 S1 RNA binding domain FFE90_012555 PF02224 Cytidylate kinase FFE90_012560 PF17313 Family of unknown function (DUF5359) FFE90_012565 PF07238 PilZ domain FFE90_012565 PF12945 Flagellar protein YcgR FFE90_012570 PF03413 Peptidase propeptide and YPEB domain FFE90_012570 PF14620 YpeB sporulation FFE90_012575 PF07486 Cell Wall Hydrolase FFE90_012575 PF01471 Putative peptidoglycan binding domain FFE90_012580 PF13367 PrsW family intramembrane metalloprotease FFE90_012590 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FFE90_012590 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FFE90_012595 PF05389 Negative regulator of genetic competence (MecA) FFE90_012600 PF00149 Calcineurin-like phosphoesterase FFE90_012605 PF10864 Protein of unknown function (DUF2663) FFE90_012610 PF01476 LysM domain FFE90_012615 PF02517 CPBP intramembrane metalloprotease FFE90_012620 PF00271 Helicase conserved C-terminal domain FFE90_012620 PF00270 DEAD/DEAH box helicase FFE90_012625 PF14493 Helix-turn-helix domain FFE90_012635 PF12822 ECF transporter, substrate-specific component FFE90_012640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE90_012640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE90_012640 PF01842 ACT domain FFE90_012645 PF01487 Type I 3-dehydroquinase FFE90_012655 PF08281 Sigma-70, region 4 FFE90_012655 PF04542 Sigma-70 region 2 FFE90_012660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_012660 PF00672 HAMP domain FFE90_012660 PF00512 His Kinase A (phospho-acceptor) domain FFE90_012660 PF00989 PAS fold FFE90_012660 PF18698 Histidine kinase sensor domain FFE90_012665 PF00486 Transcriptional regulatory protein, C terminal FFE90_012665 PF00072 Response regulator receiver domain FFE90_012670 PF01578 Cytochrome C assembly protein FFE90_012675 PF05140 ResB-like family FFE90_012680 PF00578 AhpC/TSA family FFE90_012685 PF00849 RNA pseudouridylate synthase FFE90_012685 PF01479 S4 domain FFE90_012690 PF07670 Nucleoside recognition FFE90_012695 PF07670 Nucleoside recognition FFE90_012700 PF07943 Penicillin-binding protein 5, C-terminal domain FFE90_012700 PF00768 D-alanyl-D-alanine carboxypeptidase FFE90_012705 PF13047 Protein of unknown function (DUF3907) FFE90_012710 PF04079 Segregation and condensation complex subunit ScpB FFE90_012715 PF02616 Segregation and condensation protein ScpA FFE90_012720 PF03745 Domain of unknown function (DUF309) FFE90_012725 PF00583 Acetyltransferase (GNAT) family FFE90_012730 PF00885 6,7-dimethyl-8-ribityllumazine synthase FFE90_012735 PF00925 GTP cyclohydrolase II FFE90_012735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FFE90_012740 PF00677 Lumazine binding domain FFE90_012745 PF01872 RibD C-terminal domain FFE90_012745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFE90_012755 PF10502 Signal peptidase, peptidase S26 FFE90_012765 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) FFE90_012785 PF10676 Spore germination protein gerPA/gerPF FFE90_012790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FFE90_012800 PF06207 Protein of unknown function (DUF1002) FFE90_012805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFE90_012805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FFE90_012810 PF03323 Bacillus/Clostridium GerA spore germination protein FFE90_012815 PF14097 Stage V sporulation protein AE1 FFE90_012820 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FFE90_012825 PF07451 Stage V sporulation protein AD (SpoVAD) FFE90_012830 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FFE90_012835 PF13782 Stage V sporulation protein AB FFE90_012840 PF12164 Stage V sporulation protein AA FFE90_012845 PF04545 Sigma-70, region 4 FFE90_012845 PF04539 Sigma-70 region 3 FFE90_012845 PF04542 Sigma-70 region 2 FFE90_012850 PF13581 Histidine kinase-like ATPase domain FFE90_012855 PF01740 STAS domain FFE90_012860 PF00768 D-alanyl-D-alanine carboxypeptidase FFE90_012860 PF07943 Penicillin-binding protein 5, C-terminal domain FFE90_012865 PF01048 Phosphorylase superfamily FFE90_012870 PF01676 Metalloenzyme superfamily FFE90_012875 PF00589 Phage integrase family FFE90_012875 PF02899 Phage integrase, N-terminal SAM-like domain FFE90_012880 PF14004 Protein of unknown function (DUF4227) FFE90_012885 PF01475 Ferric uptake regulator family FFE90_012890 PF01944 Stage II sporulation protein M FFE90_012900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE90_012900 PF03949 Malic enzyme, NAD binding domain FFE90_012900 PF00390 Malic enzyme, N-terminal domain FFE90_012905 PF03553 Na+/H+ antiporter family FFE90_012910 PF10415 Fumarase C C-terminus FFE90_012910 PF00206 Lyase FFE90_012915 PF00710 Asparaginase, N-terminal FFE90_012915 PF17763 Glutaminase/Asparaginase C-terminal domain FFE90_012920 PF01381 Helix-turn-helix FFE90_012930 PF00293 NUDIX domain FFE90_012935 PF13072 Mother cell inhibitor of FtsZ FFE90_012940 PF00248 Aldo/keto reductase family FFE90_012945 PF13025 Protein of unknown function (DUF3886) FFE90_012950 PF12146 Serine aminopeptidase, S33 FFE90_012955 PF10827 Protein of unknown function (DUF2552) FFE90_012960 PF01521 Iron-sulphur cluster biosynthesis FFE90_012965 PF04229 GrpB protein FFE90_012965 PF13673 Acetyltransferase (GNAT) domain FFE90_012970 PF03992 Antibiotic biosynthesis monooxygenase FFE90_012975 PF00583 Acetyltransferase (GNAT) family FFE90_012980 PF08863 YolD-like protein FFE90_012985 PF00817 impB/mucB/samB family FFE90_012985 PF11799 impB/mucB/samB family C-terminal domain FFE90_012990 PF14164 YqzH-like protein FFE90_012995 PF07690 Major Facilitator Superfamily FFE90_013005 PF00485 Phosphoribulokinase / Uridine kinase family FFE90_013010 PF00291 Pyridoxal-phosphate dependent enzyme FFE90_013015 PF00106 short chain dehydrogenase FFE90_013020 PF00753 Metallo-beta-lactamase superfamily FFE90_013025 PF03807 NADP oxidoreductase coenzyme F420-dependent FFE90_013025 PF14748 Pyrroline-5-carboxylate reductase dimerisation FFE90_013030 PF01546 Peptidase family M20/M25/M40 FFE90_013035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFE90_013040 PF12146 Serine aminopeptidase, S33 FFE90_013050 PF12706 Beta-lactamase superfamily domain FFE90_013055 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FFE90_013055 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FFE90_013060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFE90_013060 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FFE90_013065 PF11799 impB/mucB/samB family C-terminal domain FFE90_013065 PF00817 impB/mucB/samB family FFE90_013065 PF11798 IMS family HHH motif FFE90_013075 PF02096 60Kd inner membrane protein FFE90_013080 PF09844 Uncharacterized conserved protein (COG2071) FFE90_013085 PF01546 Peptidase family M20/M25/M40 FFE90_013085 PF07687 Peptidase dimerisation domain FFE90_013090 PF01039 Carboxyl transferase domain FFE90_013100 PF03734 L,D-transpeptidase catalytic domain FFE90_013105 PF06081 Aromatic acid exporter family member 1 FFE90_013105 PF11728 Putative aromatic acid exporter C-terminal domain FFE90_013110 PF00005 ABC transporter FFE90_013115 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_013120 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE90_013125 PF06491 Disulphide isomerase FFE90_013130 PF00781 Diacylglycerol kinase catalytic domain FFE90_013135 PF07690 Major Facilitator Superfamily FFE90_013140 PF06445 GyrI-like small molecule binding domain FFE90_013140 PF13411 MerR HTH family regulatory protein FFE90_013145 PF02817 e3 binding domain FFE90_013145 PF00364 Biotin-requiring enzyme FFE90_013145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FFE90_013150 PF02779 Transketolase, pyrimidine binding domain FFE90_013150 PF02780 Transketolase, C-terminal domain FFE90_013155 PF00676 Dehydrogenase E1 component FFE90_013160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFE90_013160 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_013165 PF00871 Acetokinase family FFE90_013170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FFE90_013170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FFE90_013175 PF01515 Phosphate acetyl/butaryl transferase FFE90_013180 PF00989 PAS fold FFE90_013180 PF00158 Sigma-54 interaction domain FFE90_013180 PF02954 Bacterial regulatory protein, Fis family FFE90_013185 PF11118 Protein of unknown function (DUF2627) FFE90_013195 PF03972 MmgE/PrpD family FFE90_013200 PF00285 Citrate synthase, C-terminal domain FFE90_013205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFE90_013205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFE90_013205 PF02770 Acyl-CoA dehydrogenase, middle domain FFE90_013210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFE90_013210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFE90_013215 PF02803 Thiolase, C-terminal domain FFE90_013215 PF00108 Thiolase, N-terminal domain FFE90_013220 PF03009 Glycerophosphoryl diester phosphodiesterase family FFE90_013225 PF01520 N-acetylmuramoyl-L-alanine amidase FFE90_013240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFE90_013245 PF08769 Sporulation initiation factor Spo0A C terminal FFE90_013245 PF00072 Response regulator receiver domain FFE90_013250 PF17820 PDZ domain FFE90_013250 PF05580 SpoIVB peptidase S55 FFE90_013255 PF13476 AAA domain FFE90_013260 PF02863 Arginine repressor, C-terminal domain FFE90_013260 PF01316 Arginine repressor, DNA binding domain FFE90_013265 PF01479 S4 domain FFE90_013265 PF01728 FtsJ-like methyltransferase FFE90_013270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FFE90_013270 PF02779 Transketolase, pyrimidine binding domain FFE90_013270 PF02780 Transketolase, C-terminal domain FFE90_013275 PF00348 Polyprenyl synthetase FFE90_013280 PF02609 Exonuclease VII small subunit FFE90_013285 PF02601 Exonuclease VII, large subunit FFE90_013285 PF13742 OB-fold nucleic acid binding domain FFE90_013290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FFE90_013290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FFE90_013295 PF01029 NusB family FFE90_013300 PF03780 Asp23 family, cell envelope-related function FFE90_013305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFE90_013305 PF00289 Biotin carboxylase, N-terminal domain FFE90_013305 PF02785 Biotin carboxylase C-terminal domain FFE90_013310 PF00364 Biotin-requiring enzyme FFE90_013315 PF12685 SpoIIIAH-like protein FFE90_013325 PF09581 Stage III sporulation protein AF (Spore_III_AF) FFE90_013330 PF09546 Stage III sporulation protein AE (spore_III_AE) FFE90_013335 PF06686 Stage III sporulation protein AC/AD protein family FFE90_013340 PF06686 Stage III sporulation protein AC/AD protein family FFE90_013345 PF09548 Stage III sporulation protein AB (spore_III_AB) FFE90_013355 PF10942 Protein of unknown function (DUF2619) FFE90_013360 PF01132 Elongation factor P (EF-P) OB domain FFE90_013360 PF08207 Elongation factor P (EF-P) KOW-like domain FFE90_013360 PF09285 Elongation factor P, C-terminal FFE90_013365 PF01321 Creatinase/Prolidase N-terminal domain FFE90_013365 PF00557 Metallopeptidase family M24 FFE90_013370 PF01220 Dehydroquinase class II FFE90_013375 PF11085 Conserved membrane protein YqhR FFE90_013380 PF07136 Protein of unknown function (DUF1385) FFE90_013390 PF01734 Patatin-like phospholipase FFE90_013395 PF02742 Iron dependent repressor, metal binding and dimerisation domain FFE90_013395 PF01325 Iron dependent repressor, N-terminal DNA binding domain FFE90_013400 PF03099 Biotin/lipoate A/B protein ligase family FFE90_013405 PF00581 Rhodanese-like domain FFE90_013410 PF02347 Glycine cleavage system P-protein FFE90_013415 PF02347 Glycine cleavage system P-protein FFE90_013420 PF01571 Aminomethyltransferase folate-binding domain FFE90_013420 PF08669 Glycine cleavage T-protein C-terminal barrel domain FFE90_013425 PF00271 Helicase conserved C-terminal domain FFE90_013425 PF00176 SNF2 family N-terminal domain FFE90_013430 PF11079 Bacterial protein YqhG of unknown function FFE90_013435 PF08671 Anti-repressor SinI FFE90_013440 PF01381 Helix-turn-helix FFE90_013440 PF08671 Anti-repressor SinI FFE90_013445 PF12389 Camelysin metallo-endopeptidase FFE90_013460 PF13028 Protein of unknown function (DUF3889) FFE90_013465 PF14038 YqzE-like protein FFE90_013470 PF14173 ComG operon protein 7 FFE90_013475 PF15980 Putative Competence protein ComGF FFE90_013485 PF07963 Prokaryotic N-terminal methylation motif FFE90_013490 PF07963 Prokaryotic N-terminal methylation motif FFE90_013495 PF00482 Type II secretion system (T2SS), protein F FFE90_013500 PF00437 Type II/IV secretion system protein FFE90_013510 PF01544 CorA-like Mg2+ transporter protein FFE90_013515 PF00571 CBS domain FFE90_013515 PF03471 Transporter associated domain FFE90_013515 PF01595 Cyclin M transmembrane N-terminal domain FFE90_013520 PF01740 STAS domain FFE90_013520 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain FFE90_013530 PF03960 ArsC family FFE90_013535 PF11117 Protein of unknown function (DUF2626) FFE90_013540 PF00753 Metallo-beta-lactamase superfamily FFE90_013545 PF10958 Protein of unknown function (DUF2759) FFE90_013550 PF01910 Thiamine-binding protein FFE90_013560 PF00246 Zinc carboxypeptidase FFE90_013565 PF00884 Sulfatase FFE90_013570 PF00480 ROK family FFE90_013575 PF06014 Bacterial protein of unknown function (DUF910) FFE90_013580 PF01694 Rhomboid family FFE90_013590 PF01812 5-formyltetrahydrofolate cyclo-ligase family FFE90_013595 PF00471 Ribosomal protein L33 FFE90_013600 PF13439 Glycosyltransferase Family 4 FFE90_013600 PF00534 Glycosyl transferases group 1 FFE90_013620 PF00005 ABC transporter FFE90_013625 PF00005 ABC transporter FFE90_013630 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_013635 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_013640 PF12849 PBP superfamily domain FFE90_013650 PF07690 Major Facilitator Superfamily FFE90_013655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FFE90_013655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FFE90_013660 PF04306 Protein of unknown function (DUF456) FFE90_013665 PF06691 Protein of unknown function (DUF1189) FFE90_013680 PF04551 GcpE protein FFE90_013695 PF01475 Ferric uptake regulator family FFE90_013700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FFE90_013700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FFE90_013705 PF11116 Protein of unknown function (DUF2624) FFE90_013710 PF01261 Xylose isomerase-like TIM barrel FFE90_013715 PF00271 Helicase conserved C-terminal domain FFE90_013715 PF00270 DEAD/DEAH box helicase FFE90_013720 PF14181 YqfQ-like protein FFE90_013725 PF02401 LytB protein FFE90_013730 PF01784 NIF3 (NGG1p interacting factor 3) FFE90_013735 PF04816 tRNA (adenine(22)-N(1))-methyltransferase FFE90_013740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFE90_013750 PF04545 Sigma-70, region 4 FFE90_013750 PF04539 Sigma-70 region 3 FFE90_013750 PF00140 Sigma-70 factor, region 1.2 FFE90_013750 PF03979 Sigma-70 factor, region 1.1 FFE90_013750 PF04542 Sigma-70 region 2 FFE90_013755 PF01807 CHC2 zinc finger FFE90_013755 PF08275 DNA primase catalytic core, N-terminal domain FFE90_013755 PF10410 DnaB-helicase binding domain of primase FFE90_013760 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FFE90_013765 PF03618 Kinase/pyrophosphorylase FFE90_013770 PF00571 CBS domain FFE90_013770 PF08279 HTH domain FFE90_013775 PF02092 Glycyl-tRNA synthetase beta subunit FFE90_013780 PF02091 Glycyl-tRNA synthetase alpha subunit FFE90_013785 PF11967 Recombination protein O N terminal FFE90_013785 PF02565 Recombination protein O C terminal FFE90_013790 PF14006 YqzL-like protein FFE90_013795 PF07650 KH domain FFE90_013795 PF01926 50S ribosome-binding GTPase FFE90_013800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFE90_013805 PF01219 Prokaryotic diacylglycerol kinase FFE90_013810 PF02130 Uncharacterized protein family UPF0054 FFE90_013815 PF07697 7TM-HD extracellular FFE90_013815 PF01966 HD domain FFE90_013815 PF07698 7TM receptor with intracellular HD hydrolase FFE90_013820 PF02562 PhoH-like protein FFE90_013825 PF06898 Putative stage IV sporulation protein YqfD FFE90_013830 PF07873 YabP family FFE90_013840 PF12127 SigmaW regulon antibacterial FFE90_013845 PF01972 Serine dehydrogenase proteinase FFE90_013845 PF01957 NfeD-like C-terminal, partner-binding FFE90_013850 PF09424 Yqey-like protein FFE90_013855 PF01165 Ribosomal protein S21 FFE90_013860 PF02690 Na+/Pi-cotransporter FFE90_013865 PF00919 Uncharacterized protein family UPF0004 FFE90_013865 PF01938 TRAM domain FFE90_013865 PF04055 Radical SAM superfamily FFE90_013870 PF04452 RNA methyltransferase FFE90_013880 PF00226 DnaJ domain FFE90_013880 PF00684 DnaJ central domain FFE90_013880 PF01556 DnaJ C terminal domain FFE90_013885 PF00012 Hsp70 protein FFE90_013890 PF01025 GrpE FFE90_013895 PF01628 HrcA protein C terminal domain FFE90_013900 PF04055 Radical SAM superfamily FFE90_013900 PF06969 HemN C-terminal domain FFE90_013905 PF06421 GTP-binding protein LepA C-terminus FFE90_013905 PF03144 Elongation factor Tu domain 2 FFE90_013905 PF00009 Elongation factor Tu GTP binding domain FFE90_013905 PF00679 Elongation factor G C-terminus FFE90_013910 PF12438 Protein of unknown function (DUF3679) FFE90_013915 PF07454 Stage II sporulation protein P (SpoIIP) FFE90_013920 PF03418 Germination protease FFE90_013925 PF01649 Ribosomal protein S20 FFE90_013930 PF06144 DNA polymerase III, delta subunit FFE90_013940 PF14141 YqzM-like protein FFE90_013945 PF13567 Domain of unknown function (DUF4131) FFE90_013945 PF03772 Competence protein FFE90_013945 PF00753 Metallo-beta-lactamase superfamily FFE90_013950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFE90_013955 PF10531 SLBB domain FFE90_013960 PF03807 NADP oxidoreductase coenzyme F420-dependent FFE90_013960 PF14748 Pyrroline-5-carboxylate reductase dimerisation FFE90_013965 PF13649 Methyltransferase domain FFE90_013975 PF01966 HD domain FFE90_013980 PF01467 Cytidylyltransferase-like FFE90_013985 PF01985 CRS1 / YhbY (CRM) domain FFE90_013990 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FFE90_013990 PF01488 Shikimate / quinate 5-dehydrogenase FFE90_013990 PF08501 Shikimate dehydrogenase substrate binding domain FFE90_013995 PF01926 50S ribosome-binding GTPase FFE90_014005 PF08970 Sporulation inhibitor A FFE90_014010 PF00657 GDSL-like Lipase/Acylhydrolase FFE90_014015 PF01510 N-acetylmuramoyl-L-alanine amidase FFE90_014015 PF01471 Putative peptidoglycan binding domain FFE90_014020 PF09335 SNARE associated Golgi protein FFE90_014025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFE90_014025 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FFE90_014035 PF14040 Deoxyribonuclease NucA/NucB FFE90_014045 PF07508 Recombinase FFE90_014045 PF00239 Resolvase, N terminal domain FFE90_014045 PF13408 Recombinase zinc beta ribbon domain FFE90_014055 PF01451 Low molecular weight phosphotyrosine protein phosphatase FFE90_014060 PF01758 Sodium Bile acid symporter family FFE90_014065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_014070 PF01022 Bacterial regulatory protein, arsR family FFE90_014075 PF08892 YqcI/YcgG family FFE90_014080 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_014080 PF13181 Tetratricopeptide repeat FFE90_014095 PF04740 LXG domain of WXG superfamily FFE90_014095 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues FFE90_014095 PF14449 Pre-toxin TG FFE90_014100 PF05076 Suppressor of fused protein (SUFU) FFE90_014120 PF01510 N-acetylmuramoyl-L-alanine amidase FFE90_014120 PF01471 Putative peptidoglycan binding domain FFE90_014125 PF05105 Bacteriophage holin family FFE90_014135 PF09693 Phage uncharacterised protein (Phage_XkdX) FFE90_014140 PF09636 XkdW protein FFE90_014155 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) FFE90_014160 PF04865 Baseplate J-like protein FFE90_014165 PF10934 Protein of unknown function (DUF2634) FFE90_014170 PF10844 Protein of unknown function (DUF2577) FFE90_014180 PF01476 LysM domain FFE90_014185 PF01464 Transglycosylase SLT domain FFE90_014195 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC FFE90_014210 PF09393 Phage tail tube protein FFE90_014215 PF04984 Phage tail sheath protein subtilisin-like domain FFE90_014215 PF17482 Phage tail sheath C-terminal domain FFE90_014215 PF17481 Phage tail sheath protein beta-sandwich domain FFE90_014230 PF04883 Bacteriophage HK97-gp10, putative tail-component FFE90_014235 PF12206 Domain of unknown function (DUF3599) FFE90_014240 PF11436 Protein of unknown function (DUF3199) FFE90_014245 PF14553 YqbF, hypothetical protein domain FFE90_014250 PF05065 Phage capsid family FFE90_014255 PF14550 Putative phage serine protease XkdF FFE90_014265 PF04233 Phage Mu protein F like protein FFE90_014270 PF04860 Phage portal protein FFE90_014275 PF17288 Terminase RNAseH like domain FFE90_014275 PF04466 Phage terminase large subunit FFE90_014280 PF10668 Phage terminase small subunit FFE90_014300 PF17356 Phage-like element PBSX protein XtrA FFE90_014305 PF05866 Endodeoxyribonuclease RusA FFE90_014315 PF01695 IstB-like ATP binding protein FFE90_014320 PF07261 Replication initiation and membrane attachment FFE90_014325 PF03837 RecT family FFE90_014330 PF09588 YqaJ-like viral recombinase domain FFE90_014335 PF09466 Hypothetical protein Yqai FFE90_014345 PF17448 Uncharacterized YqaH-like FFE90_014350 PF01381 Helix-turn-helix FFE90_014360 PF01381 Helix-turn-helix FFE90_014365 PF01381 Helix-turn-helix FFE90_014380 PF06114 IrrE N-terminal-like domain FFE90_014405 PF06146 Phosphate-starvation-inducible E FFE90_014410 PF00512 His Kinase A (phospho-acceptor) domain FFE90_014415 PF00486 Transcriptional regulatory protein, C terminal FFE90_014415 PF00072 Response regulator receiver domain FFE90_014420 PF04235 Protein of unknown function (DUF418) FFE90_014430 PF00583 Acetyltransferase (GNAT) family FFE90_014435 PF02525 Flavodoxin-like fold FFE90_014440 PF13787 Protein of unknown function with HXXEE motif FFE90_014445 PF01925 Sulfite exporter TauE/SafE FFE90_014450 PF01206 Sulfurtransferase TusA FFE90_014455 PF00581 Rhodanese-like domain FFE90_014455 PF00753 Metallo-beta-lactamase superfamily FFE90_014465 PF00581 Rhodanese-like domain FFE90_014465 PF01206 Sulfurtransferase TusA FFE90_014475 PF13686 DsrE/DsrF/DrsH-like family FFE90_014480 PF02583 Metal-sensitive transcriptional repressor FFE90_014495 PF07883 Cupin domain FFE90_014510 PF13411 MerR HTH family regulatory protein FFE90_014510 PF06445 GyrI-like small molecule binding domain FFE90_014515 PF07690 Major Facilitator Superfamily FFE90_014520 PF00583 Acetyltransferase (GNAT) family FFE90_014525 PF01595 Cyclin M transmembrane N-terminal domain FFE90_014525 PF03471 Transporter associated domain FFE90_014525 PF00571 CBS domain FFE90_014530 PF14142 YrzO-like protein FFE90_014535 PF00892 EamA-like transporter family FFE90_014540 PF03466 LysR substrate binding domain FFE90_014540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_014550 PF01545 Cation efflux family FFE90_014550 PF16916 Dimerisation domain of Zinc Transporter FFE90_014555 PF14552 Tautomerase enzyme FFE90_014560 PF03466 LysR substrate binding domain FFE90_014560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_014570 PF05525 Branched-chain amino acid transport protein FFE90_014575 PF05437 Branched-chain amino acid transport protein (AzlD) FFE90_014580 PF03591 AzlC protein FFE90_014585 PF01037 Lrp/AsnC ligand binding domain FFE90_014590 PF01337 Barstar (barnase inhibitor) FFE90_014595 PF00067 Cytochrome P450 FFE90_014605 PF00857 Isochorismatase family FFE90_014610 PF10823 Protein of unknown function (DUF2568) FFE90_014620 PF05163 DinB family FFE90_014625 PF04439 Streptomycin adenylyltransferase FFE90_014630 PF03060 Nitronate monooxygenase FFE90_014645 PF01177 Asp/Glu/Hydantoin racemase FFE90_014650 PF15493 Domain of unknown function, YrpD FFE90_014655 PF09680 Family of unknown function FFE90_014665 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FFE90_014670 PF04542 Sigma-70 region 2 FFE90_014670 PF08281 Sigma-70, region 4 FFE90_014675 PF00248 Aldo/keto reductase family FFE90_014680 PF03600 Citrate transporter FFE90_014685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_014685 PF03466 LysR substrate binding domain FFE90_014690 PF04303 PrpF protein FFE90_014695 PF01374 Glycosyl hydrolase family 46 FFE90_014705 PF00561 alpha/beta hydrolase fold FFE90_014725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_014735 PF07875 Coat F domain FFE90_014740 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_014740 PF00107 Zinc-binding dehydrogenase FFE90_014740 PF13823 Alcohol dehydrogenase GroES-associated FFE90_014750 PF07875 Coat F domain FFE90_014755 PF13411 MerR HTH family regulatory protein FFE90_014765 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_014765 PF00107 Zinc-binding dehydrogenase FFE90_014770 PF01965 DJ-1/PfpI family FFE90_014775 PF08244 Glycosyl hydrolases family 32 C terminal FFE90_014775 PF00251 Glycosyl hydrolases family 32 N-terminal domain FFE90_014780 PF03613 PTS system mannose/fructose/sorbose family IID component FFE90_014785 PF03609 PTS system sorbose-specific iic component FFE90_014790 PF03830 PTS system sorbose subfamily IIB component FFE90_014795 PF03610 PTS system fructose IIA component FFE90_014800 PF03610 PTS system fructose IIA component FFE90_014800 PF00158 Sigma-54 interaction domain FFE90_014800 PF00874 PRD domain FFE90_014810 PF00324 Amino acid permease FFE90_014815 PF01810 LysE type translocator FFE90_014820 PF11495 Archaeal transcriptional regulator TrmB FFE90_014820 PF01978 Sugar-specific transcriptional regulator TrmB FFE90_014825 PF04542 Sigma-70 region 2 FFE90_014825 PF08281 Sigma-70, region 4 FFE90_014830 PF13739 Deacetylase PdaC FFE90_014830 PF11738 Protein of unknown function (DUF3298) FFE90_014835 PF01757 Acyltransferase family FFE90_014840 PF14145 YrhK-like protein FFE90_014845 PF00067 Cytochrome P450 FFE90_014845 PF00667 FAD binding domain FFE90_014845 PF00258 Flavodoxin FFE90_014845 PF00175 Oxidoreductase NAD-binding domain FFE90_014850 PF00440 Bacterial regulatory proteins, tetR family FFE90_014850 PF16295 Tetracyclin repressor-like, C-terminal domain FFE90_014855 PF08241 Methyltransferase domain FFE90_014865 PF09501 Probable sporulation protein (Bac_small_yrzI) FFE90_014870 PF01226 Formate/nitrite transporter FFE90_014875 PF10057 Uncharacterized conserved protein (DUF2294) FFE90_014880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FFE90_014880 PF01568 Molydopterin dinucleotide binding domain FFE90_014880 PF00384 Molybdopterin oxidoreductase FFE90_014880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE90_014880 PF00037 4Fe-4S binding domain FFE90_014885 PF07849 Protein of unknown function (DUF1641) FFE90_014890 PF14143 YrhC-like protein FFE90_014895 PF01053 Cys/Met metabolism PLP-dependent enzyme FFE90_014900 PF00291 Pyridoxal-phosphate dependent enzyme FFE90_014905 PF01048 Phosphorylase superfamily FFE90_014910 PF13649 Methyltransferase domain FFE90_014915 PF10750 Protein of unknown function (DUF2536) FFE90_014920 PF07423 Domain of unknown function (DUF1510) FFE90_014925 PF03717 Penicillin-binding Protein dimerisation domain FFE90_014925 PF00905 Penicillin binding protein transpeptidase domain FFE90_014930 PF01272 Transcription elongation factor, GreA/GreB, C-term FFE90_014930 PF03449 Transcription elongation factor, N-terminal FFE90_014935 PF00485 Phosphoribulokinase / Uridine kinase family FFE90_014955 PF02618 YceG-like family FFE90_014960 PF06949 Protein of unknown function (DUF1292) FFE90_014965 PF03652 Holliday junction resolvase FFE90_014970 PF06135 IreB regulatory phosphoprotein FFE90_014975 PF02272 DHHA1 domain FFE90_014975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFE90_014975 PF01411 tRNA synthetases class II (A) FFE90_014980 PF01594 AI-2E family transporter FFE90_014985 PF00005 ABC transporter FFE90_014990 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE90_014995 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_015000 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_015005 PF13056 Protein of unknown function (DUF3918) FFE90_015015 PF05239 PRC-barrel domain FFE90_015020 PF14490 Helix-hairpin-helix containing domain FFE90_015020 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FFE90_015020 PF13538 UvrD-like helicase C-terminal domain FFE90_015025 PF07719 Tetratricopeptide repeat FFE90_015025 PF13181 Tetratricopeptide repeat FFE90_015035 PF00266 Aminotransferase class-V FFE90_015040 PF02082 Transcriptional regulator FFE90_015045 PF12002 MgsA AAA+ ATPase C terminal FFE90_015045 PF16193 AAA C-terminal domain FFE90_015045 PF05496 Holliday junction DNA helicase RuvB P-loop domain FFE90_015050 PF00899 ThiF family FFE90_015060 PF01336 OB-fold nucleic acid binding domain FFE90_015060 PF02938 GAD domain FFE90_015060 PF00152 tRNA synthetases class II (D, K and N) FFE90_015065 PF13393 Histidyl-tRNA synthetase FFE90_015065 PF03129 Anticodon binding domain FFE90_015070 PF17449 Uncharacterized YrzK-like FFE90_015075 PF01520 N-acetylmuramoyl-L-alanine amidase FFE90_015075 PF08239 Bacterial SH3 domain FFE90_015080 PF02580 D-Tyr-tRNA(Tyr) deacylase FFE90_015085 PF04607 Region found in RelA / SpoT proteins FFE90_015085 PF13291 ACT domain FFE90_015085 PF02824 TGS domain FFE90_015090 PF00156 Phosphoribosyl transferase domain FFE90_015095 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FFE90_015095 PF17768 RecJ OB domain FFE90_015095 PF02272 DHHA1 domain FFE90_015095 PF01368 DHH family FFE90_015100 PF06305 Lipopolysaccharide assembly protein A domain FFE90_015105 PF02080 TrkA-C domain FFE90_015110 PF02355 Protein export membrane protein FFE90_015110 PF07549 SecD/SecF GG Motif FFE90_015115 PF13797 Post-transcriptional regulator FFE90_015120 PF01943 Polysaccharide biosynthesis protein FFE90_015120 PF14667 Polysaccharide biosynthesis C-terminal domain FFE90_015125 PF04239 Protein of unknown function (DUF421) FFE90_015130 PF12670 Protein of unknown function (DUF3792) FFE90_015135 PF02699 Preprotein translocase subunit FFE90_015140 PF01702 Queuine tRNA-ribosyltransferase FFE90_015145 PF02547 Queuosine biosynthesis protein FFE90_015150 PF11146 Protein of unknown function (DUF2905) FFE90_015155 PF17864 RuvB AAA lid domain FFE90_015155 PF05491 RuvB C-terminal winged helix domain FFE90_015155 PF05496 Holliday junction DNA helicase RuvB P-loop domain FFE90_015160 PF01330 RuvA N terminal domain FFE90_015160 PF07499 RuvA, C-terminal domain FFE90_015165 PF08977 Bypass of Forespore C, N terminal FFE90_015165 PF08955 BofC C-terminal domain FFE90_015170 PF07690 Major Facilitator Superfamily FFE90_015175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_015175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_015200 PF01235 Sodium:alanine symporter family FFE90_015205 PF01709 Transcriptional regulator FFE90_015210 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FFE90_015215 PF01476 LysM domain FFE90_015220 PF02445 Quinolinate synthetase A protein FFE90_015225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FFE90_015225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FFE90_015230 PF02910 Fumarate reductase flavoprotein C-term FFE90_015230 PF00890 FAD binding domain FFE90_015235 PF00266 Aminotransferase class-V FFE90_015240 PF08279 HTH domain FFE90_015240 PF02829 3H domain FFE90_015245 PF01842 ACT domain FFE90_015245 PF00800 Prephenate dehydratase FFE90_015250 PF01842 ACT domain FFE90_015255 PF01926 50S ribosome-binding GTPase FFE90_015255 PF01018 GTP1/OBG FFE90_015255 PF09269 Domain of unknown function (DUF1967) FFE90_015260 PF14682 Sporulation initiation phospho-transferase B, C-terminal FFE90_015260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FFE90_015270 PF01016 Ribosomal L27 protein FFE90_015275 PF04327 Cysteine protease Prp FFE90_015280 PF00829 Ribosomal prokaryotic L21 protein FFE90_015285 PF02163 Peptidase family M50 FFE90_015290 PF01551 Peptidase family M23 FFE90_015295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FFE90_015300 PF03775 Septum formation inhibitor MinC, C-terminal domain FFE90_015305 PF04093 rod shape-determining protein MreD FFE90_015310 PF04085 rod shape-determining protein MreC FFE90_015320 PF04002 RadC-like JAB domain FFE90_015320 PF00633 Helix-hairpin-helix motif FFE90_015325 PF02545 Maf-like protein FFE90_015330 PF05036 Sporulation related domain FFE90_015335 PF01478 Type IV leader peptidase family FFE90_015335 PF06750 Bacterial Peptidase A24 N-terminal domain FFE90_015340 PF08245 Mur ligase middle domain FFE90_015340 PF02875 Mur ligase family, glutamate ligase domain FFE90_015345 PF08264 Anticodon-binding domain of tRNA FFE90_015345 PF00133 tRNA synthetases class I (I, L, M and V) FFE90_015345 PF10458 Valyl tRNA synthetase tRNA binding arm FFE90_015360 PF01476 LysM domain FFE90_015365 PF00202 Aminotransferase class-III FFE90_015370 PF00490 Delta-aminolevulinic acid dehydratase FFE90_015375 PF02602 Uroporphyrinogen-III synthase HemD FFE90_015380 PF03900 Porphobilinogen deaminase, C-terminal domain FFE90_015380 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FFE90_015385 PF01578 Cytochrome C assembly protein FFE90_015390 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FFE90_015390 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FFE90_015390 PF01488 Shikimate / quinate 5-dehydrogenase FFE90_015400 PF01926 50S ribosome-binding GTPase FFE90_015405 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_015405 PF05362 Lon protease (S16) C-terminal proteolytic domain FFE90_015405 PF02190 ATP-dependent protease La (LON) substrate-binding domain FFE90_015410 PF05362 Lon protease (S16) C-terminal proteolytic domain FFE90_015410 PF00004 ATPase family associated with various cellular activities (AAA) FFE90_015415 PF06689 ClpX C4-type zinc finger FFE90_015415 PF10431 C-terminal, D2-small domain, of ClpB protein FFE90_015415 PF07724 AAA domain (Cdc48 subfamily) FFE90_015420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFE90_015420 PF05698 Bacterial trigger factor protein (TF) C-terminus FFE90_015420 PF05697 Bacterial trigger factor protein (TF) FFE90_015430 PF00694 Aconitase C-terminal domain FFE90_015435 PF00330 Aconitase family (aconitate hydratase) FFE90_015440 PF00180 Isocitrate/isopropylmalate dehydrogenase FFE90_015445 PF00682 HMGL-like FFE90_015445 PF08502 LeuA allosteric (dimerisation) domain FFE90_015450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FFE90_015450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FFE90_015455 PF10369 Small subunit of acetolactate synthase FFE90_015455 PF01842 ACT domain FFE90_015460 PF00205 Thiamine pyrophosphate enzyme, central domain FFE90_015460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE90_015460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE90_015470 PF00583 Acetyltransferase (GNAT) family FFE90_015475 PF09557 Domain of unknown function (DUF2382) FFE90_015475 PF11181 Heat induced stress protein YflT FFE90_015485 PF12850 Calcineurin-like phosphoesterase superfamily domain FFE90_015490 PF01725 Ham1 family FFE90_015495 PF01138 3' exoribonuclease family, domain 1 FFE90_015495 PF03725 3' exoribonuclease family, domain 2 FFE90_015500 PF10646 Sporulation and spore germination FFE90_015505 PF01177 Asp/Glu/Hydantoin racemase FFE90_015510 PF01047 MarR family FFE90_015515 PF00196 Bacterial regulatory proteins, luxR family FFE90_015520 PF03061 Thioesterase superfamily FFE90_015525 PF13085 2Fe-2S iron-sulfur cluster binding domain FFE90_015525 PF13183 4Fe-4S dicluster domain FFE90_015530 PF00890 FAD binding domain FFE90_015530 PF02910 Fumarate reductase flavoprotein C-term FFE90_015535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FFE90_015540 PF10702 Protein of unknown function (DUF2507) FFE90_015545 PF13840 ACT domain FFE90_015545 PF00696 Amino acid kinase family FFE90_015545 PF01842 ACT domain FFE90_015555 PF08459 UvrC Helix-hairpin-helix N-terminal FFE90_015555 PF02151 UvrB/uvrC motif FFE90_015555 PF01541 GIY-YIG catalytic domain FFE90_015560 PF00085 Thioredoxin FFE90_015570 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FFE90_015575 PF00766 Electron transfer flavoprotein FAD-binding domain FFE90_015575 PF01012 Electron transfer flavoprotein domain FFE90_015580 PF01012 Electron transfer flavoprotein domain FFE90_015585 PF00378 Enoyl-CoA hydratase/isomerase FFE90_015590 PF08359 YsiA-like protein, C-terminal region FFE90_015590 PF00440 Bacterial regulatory proteins, tetR family FFE90_015595 PF13193 AMP-binding enzyme C-terminal domain FFE90_015595 PF00501 AMP-binding enzyme FFE90_015600 PF03994 Domain of Unknown Function (DUF350) FFE90_015605 PF00488 MutS domain V FFE90_015605 PF01713 Smr domain FFE90_015610 PF14791 DNA polymerase beta thumb FFE90_015610 PF14716 Helix-hairpin-helix domain FFE90_015610 PF02811 PHP domain FFE90_015615 PF02674 Colicin V production protein FFE90_015620 PF05164 Cell division protein ZapA FFE90_015625 PF11858 Domain of unknown function (DUF3378) FFE90_015625 PF01351 Ribonuclease HII FFE90_015630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FFE90_015630 PF01588 Putative tRNA binding domain FFE90_015630 PF03483 B3/4 domain FFE90_015630 PF03484 tRNA synthetase B5 domain FFE90_015630 PF03147 Ferredoxin-fold anticodon binding domain FFE90_015635 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FFE90_015635 PF01409 tRNA synthetases class II core domain (F) FFE90_015645 PF00588 SpoU rRNA Methylase family FFE90_015645 PF08032 RNA 2'-O ribose methyltransferase substrate binding FFE90_015650 PF14098 Small, acid-soluble spore protein I FFE90_015655 PF13556 PucR C-terminal helix-turn-helix domain FFE90_015655 PF17853 GGDEF-like domain FFE90_015655 PF05651 Putative sugar diacid recognition FFE90_015660 PF02913 FAD linked oxidases, C-terminal domain FFE90_015660 PF01565 FAD binding domain FFE90_015665 PF02754 Cysteine-rich domain FFE90_015665 PF13183 4Fe-4S dicluster domain FFE90_015670 PF12681 Glyoxalase-like domain FFE90_015680 PF13722 5TM C-terminal transporter carbon starvation CstA FFE90_015680 PF02554 Carbon starvation protein CstA FFE90_015685 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FFE90_015690 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_015695 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_015700 PF01547 Bacterial extracellular solute-binding protein FFE90_015705 PF13685 Iron-containing alcohol dehydrogenase FFE90_015710 PF13344 Haloacid dehalogenase-like hydrolase FFE90_015715 PF00596 Class II Aldolase and Adducin N-terminal domain FFE90_015720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE90_015720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE90_015725 PF11762 L-arabinose isomerase C-terminal domain FFE90_015725 PF02610 L-arabinose isomerase FFE90_015730 PF04616 Glycosyl hydrolases family 43 FFE90_015735 PF05343 M42 glutamyl aminopeptidase FFE90_015745 PF06961 Protein of unknown function (DUF1294) FFE90_015750 PF00453 Ribosomal protein L20 FFE90_015755 PF01632 Ribosomal protein L35 FFE90_015760 PF05198 Translation initiation factor IF-3, N-terminal domain FFE90_015760 PF00707 Translation initiation factor IF-3, C-terminal domain FFE90_015770 PF04172 LrgB-like family FFE90_015775 PF03788 LrgA family FFE90_015780 PF00072 Response regulator receiver domain FFE90_015780 PF04397 LytTr DNA-binding domain FFE90_015785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_015785 PF06580 Histidine kinase FFE90_015785 PF07694 5TMR of 5TMR-LYT FFE90_015795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFE90_015795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFE90_015795 PF02824 TGS domain FFE90_015795 PF03129 Anticodon binding domain FFE90_015800 PF08812 YtxC-like family FFE90_015805 PF09335 SNARE associated Golgi protein FFE90_015810 PF07319 Primosomal protein DnaI N-terminus FFE90_015810 PF01695 IstB-like ATP binding protein FFE90_015815 PF07261 Replication initiation and membrane attachment FFE90_015820 PF03477 ATP cone domain FFE90_015825 PF02675 S-adenosylmethionine decarboxylase FFE90_015830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FFE90_015830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FFE90_015835 PF01638 HxlR-like helix-turn-helix FFE90_015840 PF07690 Major Facilitator Superfamily FFE90_015845 PF00248 Aldo/keto reductase family FFE90_015850 PF01121 Dephospho-CoA kinase FFE90_015855 PF02659 Putative manganese efflux pump FFE90_015860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FFE90_015860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FFE90_015860 PF06827 Zinc finger found in FPG and IleRS FFE90_015865 PF01367 5'-3' exonuclease, C-terminal SAM fold FFE90_015865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FFE90_015865 PF00476 DNA polymerase family A FFE90_015870 PF00989 PAS fold FFE90_015870 PF00512 His Kinase A (phospho-acceptor) domain FFE90_015870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_015870 PF16736 Single Cache-like FFE90_015875 PF00072 Response regulator receiver domain FFE90_015875 PF00486 Transcriptional regulatory protein, C terminal FFE90_015880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FFE90_015880 PF00056 lactate/malate dehydrogenase, NAD binding domain FFE90_015885 PF00180 Isocitrate/isopropylmalate dehydrogenase FFE90_015890 PF00285 Citrate synthase, C-terminal domain FFE90_015895 PF04284 Protein of unknown function (DUF441) FFE90_015900 PF01594 AI-2E family transporter FFE90_015905 PF04186 FxsA cytoplasmic membrane protein FFE90_015910 PF00391 PEP-utilising enzyme, mobile domain FFE90_015910 PF02887 Pyruvate kinase, alpha/beta domain FFE90_015910 PF00224 Pyruvate kinase, barrel domain FFE90_015915 PF00365 Phosphofructokinase FFE90_015920 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FFE90_015925 PF17848 Acetyl-coA carboxylase zinc finger domain FFE90_015925 PF01039 Carboxyl transferase domain FFE90_015930 PF00390 Malic enzyme, N-terminal domain FFE90_015930 PF03949 Malic enzyme, NAD binding domain FFE90_015935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFE90_015935 PF14579 Helix-hairpin-helix motif FFE90_015935 PF02811 PHP domain FFE90_015935 PF01336 OB-fold nucleic acid binding domain FFE90_015935 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFE90_015940 PF14034 Sporulation protein YtrH FFE90_015955 PF01368 DHH family FFE90_015955 PF02272 DHHA1 domain FFE90_015960 PF14007 YtpI-like protein FFE90_015965 PF00392 Bacterial regulatory proteins, gntR family FFE90_015965 PF00571 CBS domain FFE90_015965 PF03061 Thioesterase superfamily FFE90_015965 PF07085 DRTGG domain FFE90_015970 PF01925 Sulfite exporter TauE/SafE FFE90_015975 PF07687 Peptidase dimerisation domain FFE90_015975 PF01546 Peptidase family M20/M25/M40 FFE90_015980 PF01687 Riboflavin kinase FFE90_015985 PF00296 Luciferase-like monooxygenase FFE90_015990 PF00462 Glutaredoxin FFE90_015995 PF00296 Luciferase-like monooxygenase FFE90_016000 PF00005 ABC transporter FFE90_016005 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_016010 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_016015 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE90_016020 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE90_016025 PF00583 Acetyltransferase (GNAT) family FFE90_016030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_016030 PF03466 LysR substrate binding domain FFE90_016050 PF14698 Argininosuccinate lyase C-terminal FFE90_016050 PF00206 Lyase FFE90_016055 PF00764 Arginosuccinate synthase FFE90_016060 PF00994 Probable molybdopterin binding domain FFE90_016065 PF00871 Acetokinase family FFE90_016075 PF02384 N-6 DNA Methylase FFE90_016080 PF08534 Redoxin FFE90_016085 PF09579 Sporulation protein YtfJ (Spore_YtfJ) FFE90_016090 PF11167 Protein of unknown function (DUF2953) FFE90_016095 PF06271 RDD family FFE90_016100 PF01343 Peptidase family S49 FFE90_016105 PF01513 ATP-NAD kinase FFE90_016110 PF07969 Amidohydrolase family FFE90_016115 PF00501 AMP-binding enzyme FFE90_016115 PF13193 AMP-binding enzyme C-terminal domain FFE90_016120 PF00269 Small, acid-soluble spore proteins, alpha/beta type FFE90_016125 PF02568 Thiamine biosynthesis protein (ThiI) FFE90_016125 PF02926 THUMP domain FFE90_016130 PF00266 Aminotransferase class-V FFE90_016135 PF05525 Branched-chain amino acid transport protein FFE90_016140 PF06160 Septation ring formation regulator, EzrA FFE90_016145 PF02811 PHP domain FFE90_016150 PF00440 Bacterial regulatory proteins, tetR family FFE90_016155 PF13185 GAF domain FFE90_016160 PF00990 Diguanylate cyclase, GGDEF domain FFE90_016170 PF00163 Ribosomal protein S4/S9 N-terminal domain FFE90_016170 PF01479 S4 domain FFE90_016175 PF00579 tRNA synthetases class I (W and Y) FFE90_016175 PF01479 S4 domain FFE90_016180 PF13193 AMP-binding enzyme C-terminal domain FFE90_016180 PF00501 AMP-binding enzyme FFE90_016185 PF00583 Acetyltransferase (GNAT) family FFE90_016190 PF00571 CBS domain FFE90_016195 PF00850 Histone deacetylase domain FFE90_016200 PF00691 OmpA family FFE90_016200 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFE90_016205 PF01618 MotA/TolQ/ExbB proton channel family FFE90_016210 PF00356 Bacterial regulatory proteins, lacI family FFE90_016215 PF00793 DAHP synthetase I family FFE90_016215 PF01817 Chorismate mutase type II FFE90_016220 PF11009 Protein of unknown function (DUF2847) FFE90_016225 PF12732 YtxH-like protein FFE90_016230 PF06103 Bacterial protein of unknown function (DUF948) FFE90_016235 PF08245 Mur ligase middle domain FFE90_016235 PF01225 Mur ligase family, catalytic domain FFE90_016235 PF02875 Mur ligase family, glutamate ligase domain FFE90_016240 PF17854 FtsK alpha domain FFE90_016240 PF09397 Ftsk gamma domain FFE90_016240 PF01580 FtsK/SpoIIIE family FFE90_016245 PF14794 Domain of unknown function (DUF4479) FFE90_016245 PF01588 Putative tRNA binding domain FFE90_016250 PF07285 Protein of unknown function (DUF1444) FFE90_016255 PF00085 Thioredoxin FFE90_016265 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ FFE90_016270 PF05343 M42 glutamyl aminopeptidase FFE90_016275 PF03413 Peptidase propeptide and YPEB domain FFE90_016280 PF00390 Malic enzyme, N-terminal domain FFE90_016280 PF03949 Malic enzyme, NAD binding domain FFE90_016285 PF00753 Metallo-beta-lactamase superfamily FFE90_016290 PF02390 Putative methyltransferase FFE90_016295 PF14165 YtzH-like protein FFE90_016300 PF01636 Phosphotransferase enzyme family FFE90_016305 PF00128 Alpha amylase, catalytic domain FFE90_016305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FFE90_016305 PF17999 Pullulanase N1-terminal domain FFE90_016310 PF00781 Diacylglycerol kinase catalytic domain FFE90_016325 PF00291 Pyridoxal-phosphate dependent enzyme FFE90_016330 PF01546 Peptidase family M20/M25/M40 FFE90_016335 PF00860 Permease family FFE90_016340 PF05975 Bacterial ABC transporter protein EcsB FFE90_016345 PF00005 ABC transporter FFE90_016350 PF08220 DeoR-like helix-turn-helix domain FFE90_016355 PF00849 RNA pseudouridylate synthase FFE90_016355 PF01479 S4 domain FFE90_016360 PF14667 Polysaccharide biosynthesis C-terminal domain FFE90_016360 PF01943 Polysaccharide biosynthesis protein FFE90_016370 PF02028 BCCT, betaine/carnitine/choline family transporter FFE90_016375 PF10957 Sporulation protein Cse60 FFE90_016380 PF04854 Protein of unknown function, DUF624 FFE90_016385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_016385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_016395 PF07470 Glycosyl Hydrolase Family 88 FFE90_016400 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_016405 PF17853 GGDEF-like domain FFE90_016405 PF12833 Helix-turn-helix domain FFE90_016410 PF13416 Bacterial extracellular solute-binding protein FFE90_016415 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_016420 PF01370 NAD dependent epimerase/dehydratase family FFE90_016425 PF00067 Cytochrome P450 FFE90_016430 PF06968 Biotin and Thiamin Synthesis associated domain FFE90_016430 PF04055 Radical SAM superfamily FFE90_016440 PF00155 Aminotransferase class I and II FFE90_016445 PF00202 Aminotransferase class-III FFE90_016450 PF03744 6-carboxyhexanoate--CoA ligase FFE90_016455 PF01738 Dienelactone hydrolase family FFE90_016480 PF11975 Family 4 glycosyl hydrolase C-terminal domain FFE90_016480 PF02056 Family 4 glycosyl hydrolase FFE90_016485 PF00581 Rhodanese-like domain FFE90_016490 PF00133 tRNA synthetases class I (I, L, M and V) FFE90_016490 PF09334 tRNA synthetases class I (M) FFE90_016490 PF13603 Leucyl-tRNA synthetase, Domain 2 FFE90_016490 PF08264 Anticodon-binding domain of tRNA FFE90_016495 PF14074 Protein of unknown function (DUF4257) FFE90_016500 PF13426 PAS domain FFE90_016500 PF01740 STAS domain FFE90_016505 PF07690 Major Facilitator Superfamily FFE90_016510 PF04791 LMBR1-like membrane protein FFE90_016515 PF02687 FtsX-like permease family FFE90_016520 PF00005 ABC transporter FFE90_016525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_016530 PF00072 Response regulator receiver domain FFE90_016530 PF00486 Transcriptional regulatory protein, C terminal FFE90_016535 PF02687 FtsX-like permease family FFE90_016535 PF12704 MacB-like periplasmic core domain FFE90_016540 PF00005 ABC transporter FFE90_016555 PF00005 ABC transporter FFE90_016560 PF00392 Bacterial regulatory proteins, gntR family FFE90_016570 PF10732 Protein of unknown function (DUF2524) FFE90_016575 PF04055 Radical SAM superfamily FFE90_016575 PF16199 Radical_SAM C-terminal domain FFE90_016580 PF06962 Putative rRNA methylase FFE90_016585 PF10776 Protein of unknown function (DUF2600) FFE90_016590 PF12146 Serine aminopeptidase, S33 FFE90_016595 PF00132 Bacterial transferase hexapeptide (six repeats) FFE90_016600 PF00324 Amino acid permease FFE90_016605 PF00733 Asparagine synthase FFE90_016605 PF13537 Glutamine amidotransferase domain FFE90_016610 PF02773 S-adenosylmethionine synthetase, C-terminal domain FFE90_016610 PF02772 S-adenosylmethionine synthetase, central domain FFE90_016610 PF00438 S-adenosylmethionine synthetase, N-terminal domain FFE90_016615 PF01293 Phosphoenolpyruvate carboxykinase FFE90_016620 PF10763 Protein of unknown function (DUF2584) FFE90_016625 PF00326 Prolyl oligopeptidase family FFE90_016635 PF00005 ABC transporter FFE90_016640 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_016645 PF00293 NUDIX domain FFE90_016650 PF05105 Bacteriophage holin family FFE90_016655 PF00210 Ferritin-like domain FFE90_016665 PF13115 YtkA-like FFE90_016670 PF02664 S-Ribosylhomocysteinase (LuxS) FFE90_016675 PF01809 Putative membrane protein insertion efficiency factor FFE90_016680 PF00484 Carbonic anhydrase FFE90_016685 PF01197 Ribosomal protein L31 FFE90_016690 PF01654 Cytochrome bd terminal oxidase subunit I FFE90_016695 PF02322 Cytochrome bd terminal oxidase subunit II FFE90_016700 PF07561 Domain of Unknown Function (DUF1540) FFE90_016705 PF00950 ABC 3 transport family FFE90_016710 PF00950 ABC 3 transport family FFE90_016715 PF00005 ABC transporter FFE90_016720 PF01297 Zinc-uptake complex component A periplasmic FFE90_016730 PF13378 Enolase C-terminal domain-like FFE90_016730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFE90_016735 PF13193 AMP-binding enzyme C-terminal domain FFE90_016735 PF00501 AMP-binding enzyme FFE90_016740 PF00378 Enoyl-CoA hydratase/isomerase FFE90_016745 PF00561 alpha/beta hydrolase fold FFE90_016750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE90_016750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE90_016750 PF16582 Middle domain of thiamine pyrophosphate FFE90_016755 PF00425 chorismate binding enzyme FFE90_016765 PF01258 Prokaryotic dksA/traR C4-type zinc finger FFE90_016770 PF00483 Nucleotidyl transferase FFE90_016775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFE90_016775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFE90_016775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFE90_016780 PF01370 NAD dependent epimerase/dehydratase family FFE90_016785 PF13439 Glycosyltransferase Family 4 FFE90_016785 PF00534 Glycosyl transferases group 1 FFE90_016800 PF13439 Glycosyltransferase Family 4 FFE90_016800 PF00534 Glycosyl transferases group 1 FFE90_016805 PF01636 Phosphotransferase enzyme family FFE90_016810 PF03073 TspO/MBR family FFE90_016815 PF00343 Carbohydrate phosphorylase FFE90_016820 PF08323 Starch synthase catalytic domain FFE90_016820 PF00534 Glycosyl transferases group 1 FFE90_016825 PF00483 Nucleotidyl transferase FFE90_016830 PF00483 Nucleotidyl transferase FFE90_016835 PF00128 Alpha amylase, catalytic domain FFE90_016835 PF02806 Alpha amylase, C-terminal all-beta domain FFE90_016835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FFE90_016960 PF09515 Thiamine transporter protein (Thia_YuaJ) FFE90_016965 PF00583 Acetyltransferase (GNAT) family FFE90_016970 PF01145 SPFH domain / Band 7 family FFE90_016970 PF15975 Flotillin FFE90_016980 PF12867 DinB superfamily FFE90_016990 PF00465 Iron-containing alcohol dehydrogenase FFE90_017005 PF17735 Biofilm surface layer A FFE90_017010 PF02080 TrkA-C domain FFE90_017010 PF02254 TrkA-N domain FFE90_017015 PF02386 Cation transport protein FFE90_017020 PF05360 yiaA/B two helix domain FFE90_017025 PF13457 GW (Gly-Tryp) dipeptide domain FFE90_017025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FFE90_017030 PF07690 Major Facilitator Superfamily FFE90_017035 PF05995 Cysteine dioxygenase type I FFE90_017045 PF02673 Bacitracin resistance protein BacA FFE90_017050 PF01594 AI-2E family transporter FFE90_017055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_017055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_017060 PF06134 L-rhamnose isomerase (RhaA) FFE90_017065 PF05336 L-rhamnose mutarotase FFE90_017070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE90_017070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE90_017075 PF00455 DeoR C terminal sensor domain FFE90_017075 PF08220 DeoR-like helix-turn-helix domain FFE90_017080 PF00596 Class II Aldolase and Adducin N-terminal domain FFE90_017090 PF02743 Cache domain FFE90_017090 PF00672 HAMP domain FFE90_017090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_017095 PF02743 Cache domain FFE90_017095 PF00672 HAMP domain FFE90_017095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_017100 PF00672 HAMP domain FFE90_017100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_017100 PF02743 Cache domain FFE90_017105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_017105 PF00672 HAMP domain FFE90_017105 PF02743 Cache domain FFE90_017120 PF01894 Uncharacterised protein family UPF0047 FFE90_017130 PF16657 Maltogenic Amylase, C-terminal domain FFE90_017130 PF00128 Alpha amylase, catalytic domain FFE90_017135 PF00571 CBS domain FFE90_017135 PF01595 Cyclin M transmembrane N-terminal domain FFE90_017135 PF03471 Transporter associated domain FFE90_017140 PF04298 Putative neutral zinc metallopeptidase FFE90_017150 PF11458 Membrane-integrating protein Mistic FFE90_017155 PF07885 Ion channel FFE90_017155 PF02254 TrkA-N domain FFE90_017160 PF08868 YugN-like family FFE90_017170 PF00342 Phosphoglucose isomerase FFE90_017175 PF00465 Iron-containing alcohol dehydrogenase FFE90_017180 PF00465 Iron-containing alcohol dehydrogenase FFE90_017185 PF04070 Domain of unknown function (DUF378) FFE90_017190 PF00575 S1 RNA binding domain FFE90_017195 PF00155 Aminotransferase class I and II FFE90_017200 PF01037 Lrp/AsnC ligand binding domain FFE90_017205 PF08386 TAP-like protein FFE90_017205 PF00561 alpha/beta hydrolase fold FFE90_017210 PF08958 Domain of unknown function (DUF1871) FFE90_017215 PF00155 Aminotransferase class I and II FFE90_017220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_017220 PF00512 His Kinase A (phospho-acceptor) domain FFE90_017225 PF08810 Kinase associated protein B FFE90_017230 PF00929 Exonuclease FFE90_017240 PF07690 Major Facilitator Superfamily FFE90_017245 PF00912 Transglycosylase FFE90_017245 PF00905 Penicillin binding protein transpeptidase domain FFE90_017250 PF04134 Protein of unknown function, DUF393 FFE90_017255 PF17328 Family of unknown function (DUF5366) FFE90_017260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_017260 PF00989 PAS fold FFE90_017260 PF17203 Single cache domain 3 FFE90_017260 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FFE90_017265 PF00072 Response regulator receiver domain FFE90_017290 PF03390 2-hydroxycarboxylate transporter family FFE90_017300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFE90_017300 PF13244 Domain of unknown function (DUF4040) FFE90_017300 PF00361 Proton-conducting membrane transporter FFE90_017305 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FFE90_017310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FFE90_017315 PF00361 Proton-conducting membrane transporter FFE90_017320 PF01899 Na+/H+ ion antiporter subunit FFE90_017325 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FFE90_017330 PF03334 Na+/H+ antiporter subunit FFE90_017335 PF03061 Thioesterase superfamily FFE90_017340 PF00072 Response regulator receiver domain FFE90_017340 PF00196 Bacterial regulatory proteins, luxR family FFE90_017345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_017345 PF07730 Histidine kinase FFE90_017355 PF00348 Polyprenyl synthetase FFE90_017360 PF08181 DegQ (SacQ) family FFE90_017375 PF08668 HDOD domain FFE90_017375 PF00563 EAL domain FFE90_017380 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FFE90_017380 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FFE90_017380 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FFE90_017385 PF00857 Isochorismatase family FFE90_017390 PF07997 Protein of unknown function (DUF1694) FFE90_017395 PF14166 YueH-like protein FFE90_017400 PF10676 Spore germination protein gerPA/gerPF FFE90_017405 PF01594 AI-2E family transporter FFE90_017410 PF10049 Protein of unknown function (DUF2283) FFE90_017415 PF10842 Protein of unknown function (DUF2642) FFE90_017420 PF01966 HD domain FFE90_017425 PF00106 short chain dehydrogenase FFE90_017430 PF17355 Family of unknown function (DUF5383) FFE90_017440 PF12538 DNA transporter FFE90_017440 PF01580 FtsK/SpoIIIE family FFE90_017445 PF10140 WXG100 protein secretion system (Wss), protein YukC FFE90_017450 PF08817 WXG100 protein secretion system (Wss), protein YukD FFE90_017455 PF06013 Proteins of 100 residues with WXG FFE90_017460 PF13556 PucR C-terminal helix-turn-helix domain FFE90_017460 PF17853 GGDEF-like domain FFE90_017460 PF06018 CodY GAF-like domain FFE90_017465 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FFE90_017465 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FFE90_017470 PF10042 Uncharacterized conserved protein (DUF2278) FFE90_017475 PF03621 MbtH-like protein FFE90_017480 PF13193 AMP-binding enzyme C-terminal domain FFE90_017480 PF00501 AMP-binding enzyme FFE90_017480 PF00550 Phosphopantetheine attachment site FFE90_017480 PF00975 Thioesterase domain FFE90_017480 PF00668 Condensation domain FFE90_017485 PF00550 Phosphopantetheine attachment site FFE90_017485 PF00857 Isochorismatase family FFE90_017490 PF00501 AMP-binding enzyme FFE90_017490 PF13193 AMP-binding enzyme C-terminal domain FFE90_017495 PF00425 chorismate binding enzyme FFE90_017500 PF00106 short chain dehydrogenase FFE90_017505 PF00756 Putative esterase FFE90_017510 PF00174 Oxidoreductase molybdopterin binding domain FFE90_017515 PF02632 BioY family FFE90_017520 PF03553 Na+/H+ antiporter family FFE90_017520 PF13726 Na+-H+ antiporter family FFE90_017525 PF02789 Cytosol aminopeptidase family, N-terminal domain FFE90_017525 PF00883 Cytosol aminopeptidase family, catalytic domain FFE90_017530 PF02681 Divergent PAP2 family FFE90_017535 PF06725 3D domain FFE90_017540 PF14068 Putative membrane protein FFE90_017545 PF17302 Family of unknown function (DUF5351) FFE90_017550 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_017555 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_017565 PF00478 IMP dehydrogenase / GMP reductase domain FFE90_017570 PF04299 Putative FMN-binding domain FFE90_017575 PF00583 Acetyltransferase (GNAT) family FFE90_017580 PF01521 Iron-sulphur cluster biosynthesis FFE90_017585 PF01678 Diaminopimelate epimerase FFE90_017590 PF07662 Na+ dependent nucleoside transporter C-terminus FFE90_017590 PF01773 Na+ dependent nucleoside transporter N-terminus FFE90_017595 PF07293 Protein of unknown function (DUF1450) FFE90_017600 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_017605 PF07315 Protein of unknown function (DUF1462) FFE90_017610 PF01106 NifU-like domain FFE90_017615 PF07676 WD40-like Beta Propeller Repeat FFE90_017615 PF00326 Prolyl oligopeptidase family FFE90_017620 PF08544 GHMP kinases C terminal FFE90_017620 PF00288 GHMP kinases N terminal domain FFE90_017625 PF00291 Pyridoxal-phosphate dependent enzyme FFE90_017630 PF01842 ACT domain FFE90_017630 PF03447 Homoserine dehydrogenase, NAD binding domain FFE90_017630 PF00742 Homoserine dehydrogenase FFE90_017640 PF04608 Phosphatidylglycerophosphatase A FFE90_017645 PF13344 Haloacid dehalogenase-like hydrolase FFE90_017650 PF01934 Protein of unknown function DUF86 FFE90_017655 PF06265 Protein of unknown function (DUF1027) FFE90_017660 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FFE90_017665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FFE90_017665 PF04055 Radical SAM superfamily FFE90_017670 PF01551 Peptidase family M23 FFE90_017675 PF09560 Sporulation protein YunB (Spo_YunB) FFE90_017680 PF08827 Domain of unknown function (DUF1805) FFE90_017685 PF02872 5'-nucleotidase, C-terminal domain FFE90_017690 PF01925 Sulfite exporter TauE/SafE FFE90_017695 PF01904 Protein of unknown function DUF72 FFE90_017705 PF01979 Amidohydrolase family FFE90_017710 PF07905 Purine catabolism regulatory protein-like family FFE90_017710 PF13556 PucR C-terminal helix-turn-helix domain FFE90_017710 PF17853 GGDEF-like domain FFE90_017715 PF00860 Permease family FFE90_017720 PF00860 Permease family FFE90_017725 PF09349 OHCU decarboxylase FFE90_017725 PF01014 Uricase FFE90_017730 PF00576 HIUase/Transthyretin family FFE90_017735 PF09680 Family of unknown function FFE90_017740 PF00111 2Fe-2S iron-sulfur cluster binding domain FFE90_017740 PF01799 [2Fe-2S] binding domain FFE90_017745 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FFE90_017745 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FFE90_017750 PF00941 FAD binding domain in molybdopterin dehydrogenase FFE90_017755 PF12804 MobA-like NTP transferase domain FFE90_017760 PF02625 XdhC and CoxI family FFE90_017760 PF13478 XdhC Rossmann domain FFE90_017765 PF00266 Aminotransferase class-V FFE90_017770 PF01546 Peptidase family M20/M25/M40 FFE90_017780 PF04231 Endonuclease I FFE90_017785 PF00005 ABC transporter FFE90_017785 PF17912 MalK OB fold domain FFE90_017785 PF03459 TOBE domain FFE90_017790 PF07702 UTRA domain FFE90_017790 PF00392 Bacterial regulatory proteins, gntR family FFE90_017795 PF00294 pfkB family carbohydrate kinase FFE90_017800 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_017805 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_017810 PF01547 Bacterial extracellular solute-binding protein FFE90_017815 PF01380 SIS domain FFE90_017820 PF01541 GIY-YIG catalytic domain FFE90_017825 PF01266 FAD dependent oxidoreductase FFE90_017840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_017850 PF01458 Uncharacterized protein family (UPF0051) FFE90_017855 PF01592 NifU-like N terminal domain FFE90_017860 PF00266 Aminotransferase class-V FFE90_017865 PF01458 Uncharacterized protein family (UPF0051) FFE90_017870 PF00005 ABC transporter FFE90_017885 PF02627 Carboxymuconolactone decarboxylase family FFE90_017890 PF03180 NLPA lipoprotein FFE90_017895 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_017900 PF09383 NIL domain FFE90_017900 PF00005 ABC transporter FFE90_017905 PF02036 SCP-2 sterol transfer family FFE90_017910 PF00085 Thioredoxin FFE90_017915 PF01751 Toprim domain FFE90_017920 PF10830 Protein of unknown function (DUF2553) FFE90_017925 PF01597 Glycine cleavage H-protein FFE90_017930 PF03960 ArsC family FFE90_017935 PF02770 Acyl-CoA dehydrogenase, middle domain FFE90_017935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFE90_017935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFE90_017940 PF02803 Thiolase, C-terminal domain FFE90_017940 PF00108 Thiolase, N-terminal domain FFE90_017945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFE90_017945 PF00378 Enoyl-CoA hydratase/isomerase FFE90_017945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFE90_017950 PF14115 YuzL-like protein FFE90_017955 PF01619 Proline dehydrogenase FFE90_017965 PF07875 Coat F domain FFE90_017970 PF01047 MarR family FFE90_017975 PF07690 Major Facilitator Superfamily FFE90_017980 PF14552 Tautomerase enzyme FFE90_017990 PF03466 LysR substrate binding domain FFE90_017990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_017995 PF10835 Protein of unknown function (DUF2573) FFE90_018000 PF00005 ABC transporter FFE90_018005 PF14039 YusW-like protein FFE90_018015 PF00106 short chain dehydrogenase FFE90_018020 PF00210 Ferritin-like domain FFE90_018025 PF13180 PDZ domain FFE90_018030 PF00072 Response regulator receiver domain FFE90_018030 PF00486 Transcriptional regulatory protein, C terminal FFE90_018035 PF00672 HAMP domain FFE90_018035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_018035 PF00512 His Kinase A (phospho-acceptor) domain FFE90_018045 PF00440 Bacterial regulatory proteins, tetR family FFE90_018050 PF10415 Fumarase C C-terminus FFE90_018050 PF00206 Lyase FFE90_018055 PF13113 Protein of unknown function (DUF3970) FFE90_018060 PF03323 Bacillus/Clostridium GerA spore germination protein FFE90_018065 PF03845 Spore germination protein FFE90_018070 PF05504 Spore germination B3/ GerAC like, C-terminal FFE90_018075 PF00196 Bacterial regulatory proteins, luxR family FFE90_018075 PF00072 Response regulator receiver domain FFE90_018080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_018080 PF00672 HAMP domain FFE90_018080 PF07730 Histidine kinase FFE90_018085 PF09922 Cell wall-active antibiotics response 4TMS YvqF FFE90_018090 PF13349 Putative adhesin FFE90_018095 PF04012 PspA/IM30 family FFE90_018105 PF07690 Major Facilitator Superfamily FFE90_018110 PF01923 Cobalamin adenosyltransferase FFE90_018115 PF00005 ABC transporter FFE90_018120 PF01032 FecCD transport family FFE90_018125 PF01497 Periplasmic binding protein FFE90_018130 PF00106 short chain dehydrogenase FFE90_018135 PF08450 SMP-30/Gluconolactonase/LRE-like region FFE90_018140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_018140 PF00512 His Kinase A (phospho-acceptor) domain FFE90_018145 PF00072 Response regulator receiver domain FFE90_018145 PF00486 Transcriptional regulatory protein, C terminal FFE90_018155 PF04545 Sigma-70, region 4 FFE90_018160 PF12841 YvrJ protein family FFE90_018165 PF00190 Cupin FFE90_018170 PF14184 Regulatory protein YrvL FFE90_018175 PF02687 FtsX-like permease family FFE90_018175 PF12704 MacB-like periplasmic core domain FFE90_018180 PF00005 ABC transporter FFE90_018185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFE90_018190 PF00005 ABC transporter FFE90_018195 PF01032 FecCD transport family FFE90_018200 PF01032 FecCD transport family FFE90_018205 PF01497 Periplasmic binding protein FFE90_018215 PF13520 Amino acid permease FFE90_018225 PF09575 Small spore protein J (Spore_SspJ) FFE90_018230 PF04307 LexA-binding, inner membrane-associated putative hydrolase FFE90_018235 PF00884 Sulfatase FFE90_018240 PF12728 Helix-turn-helix domain FFE90_018240 PF12727 PBP superfamily domain FFE90_018250 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018255 PF00248 Aldo/keto reductase family FFE90_018265 PF00999 Sodium/hydrogen exchanger family FFE90_018270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FFE90_018270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FFE90_018275 PF00667 FAD binding domain FFE90_018275 PF00175 Oxidoreductase NAD-binding domain FFE90_018275 PF00258 Flavodoxin FFE90_018280 PF13538 UvrD-like helicase C-terminal domain FFE90_018285 PF03458 UPF0126 domain FFE90_018290 PF02600 Disulfide bond formation protein DsbB FFE90_018295 PF13462 Thioredoxin FFE90_018300 PF00403 Heavy-metal-associated domain FFE90_018305 PF00403 Heavy-metal-associated domain FFE90_018310 PF00403 Heavy-metal-associated domain FFE90_018315 PF02583 Metal-sensitive transcriptional repressor FFE90_018320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_018320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_018325 PF02525 Flavodoxin-like fold FFE90_018335 PF17314 Family of unknown function (DUF5360) FFE90_018340 PF00893 Small Multidrug Resistance protein FFE90_018345 PF00440 Bacterial regulatory proteins, tetR family FFE90_018350 PF00106 short chain dehydrogenase FFE90_018360 PF01668 SmpB protein FFE90_018365 PF17876 Cold shock domain FFE90_018365 PF00575 S1 RNA binding domain FFE90_018365 PF00773 RNB domain FFE90_018365 PF08206 Ribonuclease B OB domain FFE90_018370 PF12146 Serine aminopeptidase, S33 FFE90_018375 PF03840 Preprotein translocase SecG subunit FFE90_018380 PF00561 alpha/beta hydrolase fold FFE90_018385 PF01381 Helix-turn-helix FFE90_018400 PF01638 HxlR-like helix-turn-helix FFE90_018405 PF12729 Four helix bundle sensory module for signal transduction FFE90_018405 PF00672 HAMP domain FFE90_018405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFE90_018410 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFE90_018420 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018425 PF00571 CBS domain FFE90_018425 PF00005 ABC transporter FFE90_018430 PF12802 MarR family FFE90_018435 PF17418 Sporulation delaying protein SdpA FFE90_018440 PF05090 Vitamin K-dependent gamma-carboxylase FFE90_018450 PF07853 Protein of unknown function (DUF1648) FFE90_018450 PF13630 SdpI/YhfL protein family FFE90_018455 PF01022 Bacterial regulatory protein, arsR family FFE90_018460 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFE90_018470 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018475 PF00005 ABC transporter FFE90_018475 PF00571 CBS domain FFE90_018480 PF12802 MarR family FFE90_018485 PF01914 MarC family integral membrane protein FFE90_018490 PF11724 YvbH-like oligomerisation region FFE90_018490 PF08000 Bacterial PH domain FFE90_018500 PF13240 zinc-ribbon domain FFE90_018505 PF00583 Acetyltransferase (GNAT) family FFE90_018510 PF03952 Enolase, N-terminal domain FFE90_018510 PF00113 Enolase, C-terminal TIM barrel domain FFE90_018515 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FFE90_018515 PF01676 Metalloenzyme superfamily FFE90_018520 PF00121 Triosephosphate isomerase FFE90_018525 PF00162 Phosphoglycerate kinase FFE90_018530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FFE90_018530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FFE90_018535 PF04198 Putative sugar-binding domain FFE90_018540 PF00083 Sugar (and other) transporter FFE90_018545 PF00392 Bacterial regulatory proteins, gntR family FFE90_018550 PF00296 Luciferase-like monooxygenase FFE90_018560 PF03466 LysR substrate binding domain FFE90_018560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_018565 PF00892 EamA-like transporter family FFE90_018570 PF00324 Amino acid permease FFE90_018575 PF00704 Glycosyl hydrolases family 18 FFE90_018580 PF02589 LUD domain FFE90_018585 PF11870 Domain of unknown function (DUF3390) FFE90_018585 PF13183 4Fe-4S dicluster domain FFE90_018585 PF02589 LUD domain FFE90_018590 PF02754 Cysteine-rich domain FFE90_018595 PF00196 Bacterial regulatory proteins, luxR family FFE90_018595 PF00072 Response regulator receiver domain FFE90_018600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_018600 PF07730 Histidine kinase FFE90_018610 PF00005 ABC transporter FFE90_018615 PF12697 Alpha/beta hydrolase family FFE90_018620 PF07228 Stage II sporulation protein E (SpoIIE) FFE90_018620 PF13426 PAS domain FFE90_018625 PF07745 Glycosyl hydrolase family 53 FFE90_018630 PF08532 Beta-galactosidase trimerisation domain FFE90_018630 PF02449 Beta-galactosidase FFE90_018630 PF08533 Beta-galactosidase C-terminal domain FFE90_018635 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018640 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018645 PF13416 Bacterial extracellular solute-binding protein FFE90_018650 PF00356 Bacterial regulatory proteins, lacI family FFE90_018655 PF00392 Bacterial regulatory proteins, gntR family FFE90_018655 PF07729 FCD domain FFE90_018660 PF02652 L-lactate permease FFE90_018665 PF00309 Sigma-54 factor, Activator interacting domain (AID) FFE90_018665 PF04552 Sigma-54, DNA binding domain FFE90_018665 PF04963 Sigma-54 factor, core binding domain FFE90_018670 PF09628 YvfG protein FFE90_018675 PF04230 Polysaccharide pyruvyl transferase FFE90_018680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFE90_018685 PF00132 Bacterial transferase hexapeptide (six repeats) FFE90_018685 PF17836 PglD N-terminal domain FFE90_018690 PF02397 Bacterial sugar transferase FFE90_018695 PF01943 Polysaccharide biosynthesis protein FFE90_018695 PF14667 Polysaccharide biosynthesis C-terminal domain FFE90_018700 PF00535 Glycosyl transferase family 2 FFE90_018705 PF04230 Polysaccharide pyruvyl transferase FFE90_018710 PF00535 Glycosyl transferase family 2 FFE90_018720 PF13439 Glycosyltransferase Family 4 FFE90_018720 PF00534 Glycosyl transferases group 1 FFE90_018725 PF00535 Glycosyl transferase family 2 FFE90_018730 PF00534 Glycosyl transferases group 1 FFE90_018730 PF13439 Glycosyltransferase Family 4 FFE90_018735 PF02719 Polysaccharide biosynthesis protein FFE90_018740 PF13614 AAA domain FFE90_018745 PF02706 Chain length determinant protein FFE90_018750 PF08671 Anti-repressor SinI FFE90_018750 PF01381 Helix-turn-helix FFE90_018755 PF00135 Carboxylesterase family FFE90_018765 PF05870 Phenolic acid decarboxylase (PAD) FFE90_018775 PF01177 Asp/Glu/Hydantoin racemase FFE90_018780 PF11954 Domain of unknown function (DUF3471) FFE90_018780 PF00144 Beta-lactamase FFE90_018785 PF02435 Levansucrase/Invertase FFE90_018790 PF08244 Glycosyl hydrolases family 32 C terminal FFE90_018790 PF00251 Glycosyl hydrolases family 32 N-terminal domain FFE90_018795 PF13520 Amino acid permease FFE90_018800 PF17934 Tetracyclin repressor-like, C-terminal domain FFE90_018800 PF00440 Bacterial regulatory proteins, tetR family FFE90_018805 PF00893 Small Multidrug Resistance protein FFE90_018810 PF00893 Small Multidrug Resistance protein FFE90_018815 PF11553 Protein of unknown function (DUF3231) FFE90_018820 PF08031 Berberine and berberine like FFE90_018820 PF01565 FAD binding domain FFE90_018825 PF01734 Patatin-like phospholipase FFE90_018835 PF00574 Clp protease FFE90_018840 PF13419 Haloacid dehalogenase-like hydrolase FFE90_018845 PF16657 Maltogenic Amylase, C-terminal domain FFE90_018845 PF00128 Alpha amylase, catalytic domain FFE90_018850 PF03636 Glycosyl hydrolase family 65, N-terminal domain FFE90_018850 PF03633 Glycosyl hydrolase family 65, C-terminal domain FFE90_018850 PF03632 Glycosyl hydrolase family 65 central catalytic domain FFE90_018855 PF06691 Protein of unknown function (DUF1189) FFE90_018860 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018865 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_018870 PF13416 Bacterial extracellular solute-binding protein FFE90_018875 PF00128 Alpha amylase, catalytic domain FFE90_018875 PF02903 Alpha amylase, N-terminal ig-like domain FFE90_018880 PF00356 Bacterial regulatory proteins, lacI family FFE90_018885 PF03641 Possible lysine decarboxylase FFE90_018890 PF03819 MazG nucleotide pyrophosphohydrolase domain FFE90_018895 PF00916 Sulfate permease family FFE90_018895 PF01740 STAS domain FFE90_018900 PF00484 Carbonic anhydrase FFE90_018910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFE90_018910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFE90_018915 PF02687 FtsX-like permease family FFE90_018920 PF00005 ABC transporter FFE90_018925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_018930 PF00486 Transcriptional regulatory protein, C terminal FFE90_018930 PF00072 Response regulator receiver domain FFE90_018940 PF00797 N-acetyltransferase FFE90_018945 PF00381 PTS HPr component phosphorylation site FFE90_018950 PF02650 WhiA C-terminal HTH domain FFE90_018950 PF10298 WhiA N-terminal LAGLIDADG-like domain FFE90_018950 PF14527 WhiA LAGLIDADG-like domain FFE90_018955 PF01933 Uncharacterised protein family UPF0052 FFE90_018960 PF03668 P-loop ATPase protein family FFE90_018965 PF00293 NUDIX domain FFE90_018970 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_018975 PF00877 NlpC/P60 family FFE90_018985 PF00664 ABC transporter transmembrane region FFE90_018985 PF00005 ABC transporter FFE90_019005 PF01502 Phosphoribosyl-AMP cyclohydrolase FFE90_019005 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FFE90_019010 PF00977 Histidine biosynthesis protein FFE90_019015 PF00977 Histidine biosynthesis protein FFE90_019020 PF00117 Glutamine amidotransferase class-I FFE90_019025 PF00475 Imidazoleglycerol-phosphate dehydratase FFE90_019030 PF00815 Histidinol dehydrogenase FFE90_019035 PF01634 ATP phosphoribosyltransferase FFE90_019040 PF13393 Histidyl-tRNA synthetase FFE90_019045 PF13529 Peptidase_C39 like family FFE90_019050 PF03211 Pectate lyase FFE90_019055 PF14602 Hexapeptide repeat of succinyl-transferase FFE90_019060 PF13419 Haloacid dehalogenase-like hydrolase FFE90_019065 PF07670 Nucleoside recognition FFE90_019070 PF01790 Prolipoprotein diacylglyceryl transferase FFE90_019075 PF07475 HPr Serine kinase C-terminal domain FFE90_019075 PF02603 HPr Serine kinase N terminus FFE90_019080 PF01979 Amidohydrolase family FFE90_019085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FFE90_019095 PF00149 Calcineurin-like phosphoesterase FFE90_019100 PF01047 MarR family FFE90_019105 PF00067 Cytochrome P450 FFE90_019110 PF16715 Cyclodipeptide synthase FFE90_019115 PF01047 MarR family FFE90_019120 PF07690 Major Facilitator Superfamily FFE90_019125 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV FFE90_019130 PF04024 PspC domain FFE90_019135 PF13349 Putative adhesin FFE90_019155 PF00005 ABC transporter FFE90_019155 PF17755 UvrA DNA-binding domain FFE90_019155 PF17760 UvrA interaction domain FFE90_019160 PF17757 UvrB interaction domain FFE90_019160 PF12344 Ultra-violet resistance protein B FFE90_019160 PF00271 Helicase conserved C-terminal domain FFE90_019160 PF04851 Type III restriction enzyme, res subunit FFE90_019160 PF02151 UvrB/uvrC motif FFE90_019165 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) FFE90_019170 PF00391 PEP-utilising enzyme, mobile domain FFE90_019170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FFE90_019175 PF00440 Bacterial regulatory proteins, tetR family FFE90_019180 PF07690 Major Facilitator Superfamily FFE90_019185 PF17820 PDZ domain FFE90_019190 PF17423 Swarming motility protein FFE90_019195 PF17820 PDZ domain FFE90_019195 PF03572 Peptidase family S41 FFE90_019195 PF01471 Putative peptidoglycan binding domain FFE90_019200 PF02687 FtsX-like permease family FFE90_019200 PF18075 FtsX extracellular domain FFE90_019205 PF00005 ABC transporter FFE90_019210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFE90_019215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FFE90_019215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FFE90_019225 PF02810 SEC-C motif FFE90_019225 PF07517 SecA DEAD-like domain FFE90_019225 PF07516 SecA Wing and Scaffold domain FFE90_019225 PF01043 SecA preprotein cross-linking domain FFE90_019230 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FFE90_019230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FFE90_019245 PF02561 Flagellar protein FliS FFE90_019250 PF02465 Flagellar hook-associated protein 2 N-terminus FFE90_019250 PF07195 Flagellar hook-associated protein 2 C-terminus FFE90_019250 PF07196 Flagellin hook IN motif FFE90_019255 PF03646 FlaG protein FFE90_019260 PF00669 Bacterial flagellin N-terminal helical region FFE90_019260 PF00700 Bacterial flagellin C-terminal helical region FFE90_019265 PF02599 Global regulator protein family FFE90_019270 PF02623 FliW protein FFE90_019280 PF00700 Bacterial flagellin C-terminal helical region FFE90_019280 PF00669 Bacterial flagellin N-terminal helical region FFE90_019285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE90_019285 PF00460 Flagella basal body rod protein FFE90_019290 PF05130 FlgN protein FFE90_019295 PF04316 Anti-sigma-28 factor, FlgM FFE90_019310 PF10719 Late competence development protein ComFB FFE90_019315 PF00271 Helicase conserved C-terminal domain FFE90_019315 PF04851 Type III restriction enzyme, res subunit FFE90_019320 PF02645 Uncharacterised protein, DegV family COG1307 FFE90_019325 PF00072 Response regulator receiver domain FFE90_019325 PF00196 Bacterial regulatory proteins, luxR family FFE90_019330 PF05384 Sensor protein DegS FFE90_019330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_019330 PF07730 Histidine kinase FFE90_019335 PF01205 Uncharacterized protein family UPF0029 FFE90_019335 PF09186 Domain of unknown function (DUF1949) FFE90_019340 PF03816 Cell envelope-related transcriptional attenuator domain FFE90_019345 PF00953 Glycosyl transferase family 4 FFE90_019355 PF00535 Glycosyl transferase family 2 FFE90_019360 PF02706 Chain length determinant protein FFE90_019365 PF04932 O-Antigen ligase FFE90_019370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFE90_019370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFE90_019370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFE90_019375 PF13439 Glycosyltransferase Family 4 FFE90_019375 PF00534 Glycosyl transferases group 1 FFE90_019380 PF01943 Polysaccharide biosynthesis protein FFE90_019380 PF14667 Polysaccharide biosynthesis C-terminal domain FFE90_019385 PF02397 Bacterial sugar transferase FFE90_019390 PF04122 Putative cell wall binding repeat 2 FFE90_019390 PF01520 N-acetylmuramoyl-L-alanine amidase FFE90_019395 PF08486 Stage II sporulation protein FFE90_019395 PF04122 Putative cell wall binding repeat 2 FFE90_019405 PF03816 Cell envelope-related transcriptional attenuator domain FFE90_019410 PF02350 UDP-N-acetylglucosamine 2-epimerase FFE90_019415 PF00483 Nucleotidyl transferase FFE90_019425 PF00535 Glycosyl transferase family 2 FFE90_019425 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FFE90_019430 PF00535 Glycosyl transferase family 2 FFE90_019440 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FFE90_019450 PF00483 Nucleotidyl transferase FFE90_019455 PF00005 ABC transporter FFE90_019460 PF01061 ABC-2 type transporter FFE90_019465 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FFE90_019470 PF00534 Glycosyl transferases group 1 FFE90_019470 PF09318 Glycosyl transferase 1 domain A FFE90_019475 PF01467 Cytidylyltransferase-like FFE90_019480 PF03808 Glycosyl transferase WecB/TagA/CpsF family FFE90_019485 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FFE90_019495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FFE90_019495 PF08239 Bacterial SH3 domain FFE90_019495 PF05036 Sporulation related domain FFE90_019500 PF01238 Phosphomannose isomerase type I FFE90_019505 PF03323 Bacillus/Clostridium GerA spore germination protein FFE90_019510 PF03845 Spore germination protein FFE90_019515 PF05504 Spore germination B3/ GerAC like, C-terminal FFE90_019520 PF00083 Sugar (and other) transporter FFE90_019525 PF03816 Cell envelope-related transcriptional attenuator domain FFE90_019535 PF00877 NlpC/P60 family FFE90_019545 PF09587 Bacterial capsule synthesis protein PGA_cap FFE90_019550 PF14102 Capsule biosynthesis CapC FFE90_019555 PF08245 Mur ligase middle domain FFE90_019565 PF00356 Bacterial regulatory proteins, lacI family FFE90_019570 PF00294 pfkB family carbohydrate kinase FFE90_019575 PF05025 RbsD / FucU transport protein family FFE90_019580 PF00005 ABC transporter FFE90_019585 PF02653 Branched-chain amino acid transport system / permease component FFE90_019590 PF13407 Periplasmic binding protein domain FFE90_019595 PF08239 Bacterial SH3 domain FFE90_019600 PF13031 Protein of unknown function (DUF3892) FFE90_019605 PF02525 Flavodoxin-like fold FFE90_019610 PF03306 Alpha-acetolactate decarboxylase FFE90_019615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE90_019615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE90_019615 PF00205 Thiamine pyrophosphate enzyme, central domain FFE90_019620 PF03466 LysR substrate binding domain FFE90_019620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_019625 PF02040 Arsenical pump membrane protein FFE90_019640 PF08757 CotH kinase protein FFE90_019650 PF01613 Flavin reductase like domain FFE90_019655 PF13789 Domain of unknown function (DUF4181) FFE90_019665 PF01037 Lrp/AsnC ligand binding domain FFE90_019665 PF13404 AsnC-type helix-turn-helix domain FFE90_019670 PF02417 Chromate transporter FFE90_019675 PF02417 Chromate transporter FFE90_019685 PF03358 NADPH-dependent FMN reductase FFE90_019690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_019690 PF03466 LysR substrate binding domain FFE90_019695 PF04493 Endonuclease V FFE90_019700 PF07661 MORN repeat variant FFE90_019705 PF14431 YwqJ-like deaminase FFE90_019705 PF14449 Pre-toxin TG FFE90_019705 PF04740 LXG domain of WXG superfamily FFE90_019715 PF16888 Domain of unknown function (DUF5082) FFE90_019725 PF09234 Domain of unknown function (DUF1963) FFE90_019730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFE90_019730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFE90_019730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFE90_019740 PF13614 AAA domain FFE90_019745 PF02706 Chain length determinant protein FFE90_019745 PF13807 G-rich domain on putative tyrosine kinase FFE90_019755 PF04434 SWIM zinc finger FFE90_019760 PF00271 Helicase conserved C-terminal domain FFE90_019760 PF12419 SNF2 Helicase protein FFE90_019760 PF00176 SNF2 family N-terminal domain FFE90_019775 PF00455 DeoR C terminal sensor domain FFE90_019775 PF08220 DeoR-like helix-turn-helix domain FFE90_019780 PF00436 Single-strand binding protein family FFE90_019790 PF14183 YwpF-like protein FFE90_019795 PF04203 Sortase domain FFE90_019805 PF06580 Histidine kinase FFE90_019805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_019810 PF01741 Large-conductance mechanosensitive channel, MscL FFE90_019815 PF07977 FabA-like domain FFE90_019820 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_019825 PF00460 Flagella basal body rod protein FFE90_019825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE90_019830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFE90_019830 PF00460 Flagella basal body rod protein FFE90_019840 PF12116 Stage III sporulation protein D FFE90_019850 PF01047 MarR family FFE90_019855 PF07690 Major Facilitator Superfamily FFE90_019860 PF13229 Right handed beta helix region FFE90_019865 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FFE90_019870 PF07690 Major Facilitator Superfamily FFE90_019875 PF00857 Isochorismatase family FFE90_019885 PF00909 Ammonium Transporter Family FFE90_019890 PF00543 Nitrogen regulatory protein P-II FFE90_019895 PF01569 PAP2 superfamily FFE90_019900 PF04892 VanZ like family FFE90_019905 PF01551 Peptidase family M23 FFE90_019910 PF00583 Acetyltransferase (GNAT) family FFE90_019915 PF17319 Family of unknown function (DUF5362) FFE90_019925 PF17370 Family of unknown function (DUF5392) FFE90_019930 PF13396 Phospholipase_D-nuclease N-terminal FFE90_019930 PF13091 PLD-like domain FFE90_019935 PF13411 MerR HTH family regulatory protein FFE90_019935 PF07739 TipAS antibiotic-recognition domain FFE90_019940 PF17319 Family of unknown function (DUF5362) FFE90_019945 PF13460 NAD(P)H-binding FFE90_019950 PF02082 Transcriptional regulator FFE90_019955 PF01979 Amidohydrolase family FFE90_019955 PF00449 Urease alpha-subunit, N-terminal domain FFE90_019960 PF00699 Urease beta subunit FFE90_019965 PF00547 Urease, gamma subunit FFE90_019980 PF05532 CsbD-like FFE90_019990 PF17874 MalT-like TPR region FFE90_019990 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_019995 PF04055 Radical SAM superfamily FFE90_019995 PF06463 Molybdenum Cofactor Synthesis C FFE90_020000 PF02634 FdhD/NarQ family FFE90_020010 PF00092 von Willebrand factor type A domain FFE90_020020 PF00092 von Willebrand factor type A domain FFE90_020025 PF08486 Stage II sporulation protein FFE90_020030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFE90_020035 PF08680 TATA-box binding FFE90_020040 PF06612 Protein of unknown function (DUF1146) FFE90_020050 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FFE90_020050 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FFE90_020055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE90_020055 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFE90_020060 PF00231 ATP synthase FFE90_020065 PF00306 ATP synthase alpha/beta chain, C terminal domain FFE90_020065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE90_020065 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFE90_020070 PF00213 ATP synthase delta (OSCP) subunit FFE90_020075 PF00430 ATP synthase B/B' CF(0) FFE90_020080 PF00137 ATP synthase subunit C FFE90_020085 PF00119 ATP synthase A chain FFE90_020090 PF03899 ATP synthase I chain FFE90_020100 PF00464 Serine hydroxymethyltransferase FFE90_020105 PF04260 Protein of unknown function (DUF436) FFE90_020110 PF02502 Ribose/Galactose Isomerase FFE90_020115 PF01451 Low molecular weight phosphotyrosine protein phosphatase FFE90_020120 PF02659 Putative manganese efflux pump FFE90_020125 PF01300 Telomere recombination FFE90_020125 PF03481 Putative GTP-binding controlling metal-binding FFE90_020135 PF09551 Stage II sporulation protein R (spore_II_R) FFE90_020140 PF17094 Uncharacterised protein family (UPF0715) FFE90_020145 PF17247 Family of unknown function (DUF5316) FFE90_020150 PF05175 Methyltransferase small domain FFE90_020150 PF17827 PrmC N-terminal domain FFE90_020155 PF03462 PCRF domain FFE90_020155 PF00472 RF-1 domain FFE90_020160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_020165 PF13411 MerR HTH family regulatory protein FFE90_020170 PF03547 Membrane transport protein FFE90_020175 PF00390 Malic enzyme, N-terminal domain FFE90_020175 PF03949 Malic enzyme, NAD binding domain FFE90_020180 PF00265 Thymidine kinase FFE90_020185 PF01197 Ribosomal protein L31 FFE90_020190 PF07498 Rho termination factor, N-terminal domain FFE90_020190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFE90_020190 PF07497 Rho termination factor, RNA-binding domain FFE90_020200 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FFE90_020205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFE90_020210 PF00923 Transaldolase/Fructose-6-phosphate aldolase FFE90_020215 PF01116 Fructose-bisphosphate aldolase class-II FFE90_020220 PF00072 Response regulator receiver domain FFE90_020225 PF10740 Domain of unknown function (DUF2529) FFE90_020230 PF00117 Glutamine amidotransferase class-I FFE90_020230 PF06418 CTP synthase N-terminus FFE90_020235 PF05066 HB1, ASXL, restriction endonuclease HTH domain FFE90_020240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFE90_020240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFE90_020240 PF02770 Acyl-CoA dehydrogenase, middle domain FFE90_020245 PF02754 Cysteine-rich domain FFE90_020245 PF13183 4Fe-4S dicluster domain FFE90_020250 PF13091 PLD-like domain FFE90_020255 PF03851 UV-endonuclease UvdE FFE90_020265 PF01872 RibD C-terminal domain FFE90_020270 PF00664 ABC transporter transmembrane region FFE90_020270 PF00005 ABC transporter FFE90_020275 PF13091 PLD-like domain FFE90_020275 PF13396 Phospholipase_D-nuclease N-terminal FFE90_020285 PF02665 Nitrate reductase gamma subunit FFE90_020290 PF02613 Nitrate reductase delta subunit FFE90_020295 PF14711 Respiratory nitrate reductase beta C-terminal FFE90_020295 PF13247 4Fe-4S dicluster domain FFE90_020300 PF00384 Molybdopterin oxidoreductase FFE90_020300 PF14710 Respiratory nitrate reductase alpha N-terminal FFE90_020300 PF01568 Molydopterin dinucleotide binding domain FFE90_020310 PF14256 YwiC-like protein FFE90_020315 PF00325 Bacterial regulatory proteins, crp family FFE90_020315 PF00027 Cyclic nucleotide-binding domain FFE90_020320 PF07690 Major Facilitator Superfamily FFE90_020325 PF00750 tRNA synthetases class I (R) FFE90_020325 PF03485 Arginyl tRNA synthetase N terminal domain FFE90_020325 PF05746 DALR anticodon binding domain FFE90_020330 PF09148 Domain of unknown function (DUF1934) FFE90_020335 PF11420 Bacteriocin subtilosin A FFE90_020345 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FFE90_020345 PF04055 Radical SAM superfamily FFE90_020345 PF13186 Iron-sulfur cluster-binding domain FFE90_020355 PF00005 ABC transporter FFE90_020365 PF05193 Peptidase M16 inactive domain FFE90_020370 PF00675 Insulinase (Peptidase family M16) FFE90_020395 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_020400 PF11131 Rap-phr extracellular signalling FFE90_020405 PF04073 Aminoacyl-tRNA editing domain FFE90_020410 PF00491 Arginase family FFE90_020415 PF17284 Spermidine synthase tetramerisation domain FFE90_020420 PF00912 Transglycosylase FFE90_020420 PF00905 Penicillin binding protein transpeptidase domain FFE90_020430 PF08741 YwhD family FFE90_020435 PF02163 Peptidase family M50 FFE90_020440 PF01361 Tautomerase enzyme FFE90_020445 PF01047 MarR family FFE90_020450 PF02824 TGS domain FFE90_020450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFE90_020450 PF03129 Anticodon binding domain FFE90_020450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFE90_020460 PF07690 Major Facilitator Superfamily FFE90_020465 PF02082 Transcriptional regulator FFE90_020475 PF01966 HD domain FFE90_020480 PF07293 Protein of unknown function (DUF1450) FFE90_020490 PF00892 EamA-like transporter family FFE90_020495 PF03099 Biotin/lipoate A/B protein ligase family FFE90_020500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_020500 PF03466 LysR substrate binding domain FFE90_020505 PF01515 Phosphate acetyl/butaryl transferase FFE90_020520 PF00155 Aminotransferase class I and II FFE90_020525 PF07690 Major Facilitator Superfamily FFE90_020540 PF07883 Cupin domain FFE90_020550 PF07690 Major Facilitator Superfamily FFE90_020555 PF00324 Amino acid permease FFE90_020560 PF01546 Peptidase family M20/M25/M40 FFE90_020565 PF00171 Aldehyde dehydrogenase family FFE90_020570 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FFE90_020570 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FFE90_020575 PF17735 Biofilm surface layer A FFE90_020580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FFE90_020585 PF04321 RmlD substrate binding domain FFE90_020590 PF16363 GDP-mannose 4,6 dehydratase FFE90_020595 PF00483 Nucleotidyl transferase FFE90_020600 PF04101 Glycosyltransferase family 28 C-terminal domain FFE90_020605 PF02348 Cytidylyltransferase FFE90_020610 PF08666 SAF domain FFE90_020610 PF03102 NeuB family FFE90_020615 PF00583 Acetyltransferase (GNAT) family FFE90_020620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFE90_020625 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FFE90_020630 PF00535 Glycosyl transferase family 2 FFE90_020640 PF09671 Spore coat protein (Spore_GerQ) FFE90_020645 PF04241 Protein of unknown function (DUF423) FFE90_020650 PF00860 Permease family FFE90_020655 PF17261 Family of unknown function (DUF5327) FFE90_020660 PF00171 Aldehyde dehydrogenase family FFE90_020665 PF03167 Uracil DNA glycosylase superfamily FFE90_020670 PF00535 Glycosyl transferase family 2 FFE90_020685 PF03551 Transcriptional regulator PadR-like family FFE90_020690 PF08543 Phosphomethylpyrimidine kinase FFE90_020700 PF00251 Glycosyl hydrolases family 32 N-terminal domain FFE90_020700 PF08244 Glycosyl hydrolases family 32 C terminal FFE90_020705 PF00367 phosphotransferase system, EIIB FFE90_020705 PF02378 Phosphotransferase system, EIIC FFE90_020710 PF01226 Formate/nitrite transporter FFE90_020715 PF00874 PRD domain FFE90_020715 PF03123 CAT RNA binding domain FFE90_020725 PF13860 FlgD Ig-like domain FFE90_020725 PF00082 Subtilase family FFE90_020725 PF02225 PA domain FFE90_020725 PF05922 Peptidase inhibitor I9 FFE90_020730 PF00296 Luciferase-like monooxygenase FFE90_020735 PF00881 Nitroreductase family FFE90_020740 PF01098 Cell cycle protein FFE90_020745 PF17368 Spore morphogenesis and germination YwcE FFE90_020750 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FFE90_020755 PF00510 Cytochrome c oxidase subunit III FFE90_020760 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFE90_020765 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FFE90_020765 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FFE90_020770 PF04226 Transglycosylase associated protein FFE90_020775 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FFE90_020775 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FFE90_020780 PF08544 GHMP kinases C terminal FFE90_020780 PF10509 Galactokinase galactose-binding signature FFE90_020780 PF00288 GHMP kinases N terminal domain FFE90_020785 PF04138 GtrA-like protein FFE90_020790 PF00440 Bacterial regulatory proteins, tetR family FFE90_020795 PF08671 Anti-repressor SinI FFE90_020800 PF04341 Protein of unknown function, DUF485 FFE90_020805 PF00474 Sodium:solute symporter family FFE90_020810 PF01323 DSBA-like thioredoxin domain FFE90_020815 PF10518 TAT (twin-arginine translocation) pathway signal sequence FFE90_020815 PF04261 Dyp-type peroxidase family FFE90_020820 PF09375 Imelysin FFE90_020825 PF03239 Iron permease FTR1 family FFE90_020830 PF02581 Thiamine monophosphate synthase FFE90_020835 PF02110 Hydroxyethylthiazole kinase family FFE90_020840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_020840 PF03466 LysR substrate binding domain FFE90_020845 PF03788 LrgA family FFE90_020850 PF04172 LrgB-like family FFE90_020855 PF12832 MFS_1 like family FFE90_020860 PF09962 Uncharacterized conserved protein (DUF2196) FFE90_020865 PF10672 S-adenosylmethionine-dependent methyltransferase FFE90_020865 PF17785 PUA-like domain FFE90_020870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_020875 PF10924 Protein of unknown function (DUF2711) FFE90_020880 PF02378 Phosphotransferase system, EIIC FFE90_020885 PF00082 Subtilase family FFE90_020890 PF02378 Phosphotransferase system, EIIC FFE90_020890 PF00367 phosphotransferase system, EIIB FFE90_020895 PF03123 CAT RNA binding domain FFE90_020895 PF00874 PRD domain FFE90_020900 PF01501 Glycosyl transferase family 8 FFE90_020905 PF09529 Integral membrane protein (intg_mem_TP0381) FFE90_020910 PF01047 MarR family FFE90_020915 PF00579 tRNA synthetases class I (W and Y) FFE90_020915 PF01479 S4 domain FFE90_020920 PF02225 PA domain FFE90_020920 PF04389 Peptidase family M28 FFE90_020925 PF04607 Region found in RelA / SpoT proteins FFE90_020930 PF01040 UbiA prenyltransferase family FFE90_020945 PF12459 D-Ala-teichoic acid biosynthesis protein FFE90_020950 PF13193 AMP-binding enzyme C-terminal domain FFE90_020950 PF00501 AMP-binding enzyme FFE90_020955 PF03062 MBOAT, membrane-bound O-acyltransferase family FFE90_020960 PF00550 Phosphopantetheine attachment site FFE90_020965 PF04914 DltD protein FFE90_020970 PF00106 short chain dehydrogenase FFE90_020975 PF01063 Amino-transferase class IV FFE90_020980 PF11975 Family 4 glycosyl hydrolase C-terminal domain FFE90_020980 PF02056 Family 4 glycosyl hydrolase FFE90_020985 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FFE90_020990 PF02378 Phosphotransferase system, EIIC FFE90_020995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FFE90_021000 PF05043 Mga helix-turn-helix domain FFE90_021000 PF08279 HTH domain FFE90_021000 PF00874 PRD domain FFE90_021000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFE90_021010 PF02245 Methylpurine-DNA glycosylase (MPG) FFE90_021015 PF06628 Catalase-related immune-responsive FFE90_021015 PF00199 Catalase FFE90_021020 PF07690 Major Facilitator Superfamily FFE90_021025 PF12679 ABC-2 family transporter protein FFE90_021030 PF13732 Domain of unknown function (DUF4162) FFE90_021030 PF00005 ABC transporter FFE90_021035 PF13396 Phospholipase_D-nuclease N-terminal FFE90_021045 PF17280 Family of unknown function (DUF5345) FFE90_021050 PF08281 Sigma-70, region 4 FFE90_021050 PF04542 Sigma-70 region 2 FFE90_021055 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FFE90_021060 PF01256 Carbohydrate kinase FFE90_021065 PF00664 ABC transporter transmembrane region FFE90_021065 PF00005 ABC transporter FFE90_021070 PF00664 ABC transporter transmembrane region FFE90_021070 PF00005 ABC transporter FFE90_021075 PF02322 Cytochrome bd terminal oxidase subunit II FFE90_021080 PF01654 Cytochrome bd terminal oxidase subunit I FFE90_021085 PF03390 2-hydroxycarboxylate transporter family FFE90_021090 PF01435 Peptidase family M48 FFE90_021100 PF01522 Polysaccharide deacetylase FFE90_021105 PF03459 TOBE domain FFE90_021105 PF17912 MalK OB fold domain FFE90_021105 PF00005 ABC transporter FFE90_021110 PF13556 PucR C-terminal helix-turn-helix domain FFE90_021115 PF00171 Aldehyde dehydrogenase family FFE90_021120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FFE90_021120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FFE90_021125 PF11611 Domain of unknown function (DUF4352) FFE90_021130 PF16363 GDP-mannose 4,6 dehydratase FFE90_021135 PF01161 Phosphatidylethanolamine-binding protein FFE90_021140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_021140 PF03466 LysR substrate binding domain FFE90_021150 PF07730 Histidine kinase FFE90_021155 PF00196 Bacterial regulatory proteins, luxR family FFE90_021155 PF00072 Response regulator receiver domain FFE90_021160 PF07687 Peptidase dimerisation domain FFE90_021160 PF01546 Peptidase family M20/M25/M40 FFE90_021170 PF04525 LURP-one-related FFE90_021175 PF01717 Cobalamin-independent synthase, Catalytic domain FFE90_021180 PF01717 Cobalamin-independent synthase, Catalytic domain FFE90_021190 PF01144 Coenzyme A transferase FFE90_021195 PF01144 Coenzyme A transferase FFE90_021205 PF08241 Methyltransferase domain FFE90_021210 PF01773 Na+ dependent nucleoside transporter N-terminus FFE90_021210 PF07662 Na+ dependent nucleoside transporter C-terminus FFE90_021225 PF00199 Catalase FFE90_021225 PF06628 Catalase-related immune-responsive FFE90_021225 PF18011 C-terminal domain found in long catalases FFE90_021230 PF03600 Citrate transporter FFE90_021235 PF00722 Glycosyl hydrolases family 16 FFE90_021240 PF00874 PRD domain FFE90_021240 PF03123 CAT RNA binding domain FFE90_021250 PF11700 Vacuole effluxer Atg22 like FFE90_021255 PF03880 DbpA RNA binding domain FFE90_021255 PF00270 DEAD/DEAH box helicase FFE90_021255 PF00271 Helicase conserved C-terminal domain FFE90_021260 PF13472 GDSL-like Lipase/Acylhydrolase family FFE90_021275 PF14176 YxiJ-like protein FFE90_021280 PF10898 Protein of unknown function (DUF2716) FFE90_021315 PF05593 RHS Repeat FFE90_021320 PF00892 EamA-like transporter family FFE90_021325 PF00582 Universal stress protein family FFE90_021330 PF00232 Glycosyl hydrolase family 1 FFE90_021335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE90_021335 PF02378 Phosphotransferase system, EIIC FFE90_021335 PF00367 phosphotransferase system, EIIB FFE90_021340 PF18593 CdiI immunity protein FFE90_021350 PF04740 LXG domain of WXG superfamily FFE90_021350 PF14449 Pre-toxin TG FFE90_021360 PF16888 Domain of unknown function (DUF5082) FFE90_021365 PF04616 Glycosyl hydrolases family 43 FFE90_021365 PF16369 C-terminal lipocalin-like domain FFE90_021375 PF09021 HutP FFE90_021380 PF00221 Aromatic amino acid lyase FFE90_021385 PF17391 Urocanase N-terminal domain FFE90_021385 PF01175 Urocanase Rossmann-like domain FFE90_021385 PF17392 Urocanase C-terminal domain FFE90_021390 PF01979 Amidohydrolase family FFE90_021395 PF00491 Arginase family FFE90_021400 PF00324 Amino acid permease FFE90_021405 PF02885 Glycosyl transferase family, helical bundle domain FFE90_021405 PF00591 Glycosyl transferase family, a/b domain FFE90_021405 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FFE90_021410 PF07662 Na+ dependent nucleoside transporter C-terminus FFE90_021410 PF01773 Na+ dependent nucleoside transporter N-terminus FFE90_021415 PF01791 DeoC/LacD family aldolase FFE90_021420 PF04198 Putative sugar-binding domain FFE90_021425 PF06724 Domain of Unknown Function (DUF1206) FFE90_021430 PF04346 Ethanolamine utilisation protein, EutH FFE90_021435 PF03972 MmgE/PrpD family FFE90_021445 PF00005 ABC transporter FFE90_021450 PF00528 Binding-protein-dependent transport system inner membrane component FFE90_021455 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFE90_021475 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family FFE90_021490 PF11631 Protein of unknown function (DUF3255) FFE90_021510 PF01497 Periplasmic binding protein FFE90_021515 PF06486 Protein of unknown function (DUF1093) FFE90_021520 PF02687 FtsX-like permease family FFE90_021525 PF00005 ABC transporter FFE90_021530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_021535 PF00486 Transcriptional regulatory protein, C terminal FFE90_021535 PF00072 Response regulator receiver domain FFE90_021540 PF01116 Fructose-bisphosphate aldolase class-II FFE90_021545 PF01261 Xylose isomerase-like TIM barrel FFE90_021550 PF01261 Xylose isomerase-like TIM barrel FFE90_021555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFE90_021555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFE90_021560 PF07690 Major Facilitator Superfamily FFE90_021565 PF01261 Xylose isomerase-like TIM barrel FFE90_021570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFE90_021570 PF00205 Thiamine pyrophosphate enzyme, central domain FFE90_021570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFE90_021575 PF00294 pfkB family carbohydrate kinase FFE90_021580 PF04962 KduI/IolB family FFE90_021585 PF00171 Aldehyde dehydrogenase family FFE90_021590 PF08220 DeoR-like helix-turn-helix domain FFE90_021590 PF00455 DeoR C terminal sensor domain FFE90_021595 PF00248 Aldo/keto reductase family FFE90_021605 PF10850 Protein of unknown function (DUF2653) FFE90_021610 PF00083 Sugar (and other) transporter FFE90_021615 PF00183 Hsp90 protein FFE90_021630 PF00440 Bacterial regulatory proteins, tetR family FFE90_021635 PF00171 Aldehyde dehydrogenase family FFE90_021640 PF00583 Acetyltransferase (GNAT) family FFE90_021645 PF08007 Cupin superfamily protein FFE90_021650 PF08241 Methyltransferase domain FFE90_021655 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FFE90_021665 PF00733 Asparagine synthase FFE90_021665 PF13537 Glutamine amidotransferase domain FFE90_021670 PF07690 Major Facilitator Superfamily FFE90_021675 PF01011 PQQ enzyme repeat FFE90_021675 PF13360 PQQ-like domain FFE90_021675 PF13570 PQQ-like domain FFE90_021680 PF17369 Family of unknown function (DUF5391) FFE90_021685 PF06271 RDD family FFE90_021690 PF04235 Protein of unknown function (DUF418) FFE90_021695 PF07883 Cupin domain FFE90_021700 PF00440 Bacterial regulatory proteins, tetR family FFE90_021705 PF00106 short chain dehydrogenase FFE90_021710 PF01047 MarR family FFE90_021715 PF03788 LrgA family FFE90_021720 PF04172 LrgB-like family FFE90_021725 PF04230 Polysaccharide pyruvyl transferase FFE90_021730 PF02595 Glycerate kinase family FFE90_021735 PF07729 FCD domain FFE90_021735 PF00392 Bacterial regulatory proteins, gntR family FFE90_021740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFE90_021740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFE90_021745 PF02447 GntP family permease FFE90_021750 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FFE90_021750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFE90_021755 PF00578 AhpC/TSA family FFE90_021760 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFE90_021760 PF13192 Thioredoxin domain FFE90_021765 PF00232 Glycosyl hydrolase family 1 FFE90_021770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE90_021775 PF02378 Phosphotransferase system, EIIC FFE90_021775 PF00367 phosphotransferase system, EIIB FFE90_021775 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FFE90_021780 PF00392 Bacterial regulatory proteins, gntR family FFE90_021780 PF07702 UTRA domain FFE90_021795 PF00005 ABC transporter FFE90_021805 PF04055 Radical SAM superfamily FFE90_021815 PF06874 Firmicute fructose-1,6-bisphosphatase FFE90_021820 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) FFE90_021820 PF13476 AAA domain FFE90_021830 PF00149 Calcineurin-like phosphoesterase FFE90_021835 PF02590 Predicted SPOUT methyltransferase FFE90_021840 PF14116 YyzF-like protein FFE90_021850 PF00107 Zinc-binding dehydrogenase FFE90_021850 PF08240 Alcohol dehydrogenase GroES-like domain FFE90_021860 PF10852 Protein of unknown function (DUF2651) FFE90_021875 PF00583 Acetyltransferase (GNAT) family FFE90_021880 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_021890 PF00491 Arginase family FFE90_021895 PF00324 Amino acid permease FFE90_021900 PF00202 Aminotransferase class-III FFE90_021905 PF02954 Bacterial regulatory protein, Fis family FFE90_021905 PF13426 PAS domain FFE90_021905 PF00158 Sigma-54 interaction domain FFE90_021925 PF13180 PDZ domain FFE90_021930 PF00753 Metallo-beta-lactamase superfamily FFE90_021935 PF09648 YycH protein FFE90_021940 PF07435 YycH protein FFE90_021945 PF00672 HAMP domain FFE90_021945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_021945 PF00512 His Kinase A (phospho-acceptor) domain FFE90_021945 PF13426 PAS domain FFE90_021950 PF00486 Transcriptional regulatory protein, C terminal FFE90_021950 PF00072 Response regulator receiver domain FFE90_021975 PF00709 Adenylosuccinate synthetase FFE90_021980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_021985 PF00772 DnaB-like helicase N terminal domain FFE90_021985 PF03796 DnaB-like helicase C terminal domain FFE90_021990 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) FFE90_022000 PF14174 YycC-like protein FFE90_022005 PF07690 Major Facilitator Superfamily FFE90_022010 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FFE90_022015 PF03948 Ribosomal protein L9, C-terminal domain FFE90_022015 PF01281 Ribosomal protein L9, N-terminal domain FFE90_022020 PF02272 DHHA1 domain FFE90_022020 PF01368 DHH family FFE90_022025 PF09991 Predicted membrane protein (DUF2232) FFE90_022035 PF07875 Coat F domain FFE90_022040 PF01638 HxlR-like helix-turn-helix FFE90_022045 PF02833 DHHA2 domain FFE90_022045 PF01368 DHH family FFE90_022060 PF07690 Major Facilitator Superfamily FFE90_022075 PF10916 Protein of unknown function (DUF2712) FFE90_022080 PF10920 Protein of unknown function (DUF2705) FFE90_022090 PF10920 Protein of unknown function (DUF2705) FFE90_022095 PF00005 ABC transporter FFE90_022110 PF13474 SnoaL-like domain FFE90_022115 PF00805 Pentapeptide repeats (8 copies) FFE90_022120 PF07690 Major Facilitator Superfamily FFE90_022125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFE90_022125 PF03466 LysR substrate binding domain FFE90_022130 PF13673 Acetyltransferase (GNAT) domain FFE90_022145 PF00753 Metallo-beta-lactamase superfamily FFE90_022150 PF01047 MarR family FFE90_022155 PF13673 Acetyltransferase (GNAT) domain FFE90_022165 PF00583 Acetyltransferase (GNAT) family FFE90_022170 PF04237 YjbR FFE90_022175 PF01872 RibD C-terminal domain FFE90_022185 PF07690 Major Facilitator Superfamily FFE90_022190 PF08050 Tetracycline resistance leader peptide FFE90_022195 PF03190 Protein of unknown function, DUF255 FFE90_022200 PF13411 MerR HTH family regulatory protein FFE90_022205 PF00892 EamA-like transporter family FFE90_022210 PF03190 Protein of unknown function, DUF255 FFE90_022215 PF02517 CPBP intramembrane metalloprotease FFE90_022220 PF00083 Sugar (and other) transporter FFE90_022225 PF12464 Maltose acetyltransferase FFE90_022225 PF14602 Hexapeptide repeat of succinyl-transferase FFE90_022230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFE90_022235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFE90_022235 PF00356 Bacterial regulatory proteins, lacI family FFE90_022240 PF03372 Endonuclease/Exonuclease/phosphatase family FFE90_022245 PF01084 Ribosomal protein S18 FFE90_022250 PF00436 Single-strand binding protein family FFE90_022255 PF01250 Ribosomal protein S6 FFE90_022260 PF06071 Protein of unknown function (DUF933) FFE90_022260 PF01926 50S ribosome-binding GTPase FFE90_022265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFE90_022265 PF00384 Molybdopterin oxidoreductase FFE90_022265 PF01568 Molydopterin dinucleotide binding domain FFE90_022270 PF06107 Bacterial protein of unknown function (DUF951) FFE90_022280 PF06866 Protein of unknown function (DUF1256) FFE90_022285 PF02195 ParB-like nuclease domain FFE90_022285 PF17762 HTH domain found in ParB protein FFE90_022290 PF13614 AAA domain FFE90_022295 PF06713 Bacterial PH domain FFE90_022300 PF17762 HTH domain found in ParB protein FFE90_022300 PF02195 ParB-like nuclease domain FFE90_022305 PF02527 rRNA small subunit methyltransferase G FFE90_022310 PF01134 Glucose inhibited division protein A FFE90_022310 PF13932 GidA associated domain FFE90_022315 PF01926 50S ribosome-binding GTPase FFE90_022315 PF10396 GTP-binding protein TrmE N-terminus FFE90_022315 PF12631 MnmE helical domain FFE90_022320 PF01424 R3H domain FFE90_022320 PF14804 Jag N-terminus FFE90_022325 PF02096 60Kd inner membrane protein FFE90_022330 PF00825 Ribonuclease P FFE90_022335 PF00468 Ribosomal protein L34 FFE90_022345 PF00268 Ribonucleotide reductase, small chain FFE90_022350 PF00258 Flavodoxin FFE90_022390 PF17768 RecJ OB domain FFE90_022390 PF01368 DHH family FFE90_022425 PF00075 RNase H FFE90_022445 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFE90_022445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFE90_022445 PF14579 Helix-hairpin-helix motif FFE90_022445 PF02811 PHP domain FFE90_022465 PF00625 Guanylate kinase FFE90_022495 PF00265 Thymidine kinase FFE90_022505 PF18008 Replication initiator protein A C-terminal domain FFE90_022505 PF06970 Replication initiator protein A (RepA) N-terminus FFE90_022510 PF00204 DNA gyrase B FFE90_022510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFE90_022510 PF01751 Toprim domain FFE90_022510 PF00986 DNA gyrase B subunit, carboxyl terminus FFE90_022515 PF03989 DNA gyrase C-terminal domain, beta-propeller FFE90_022515 PF00521 DNA gyrase/topoisomerase IV, subunit A FFE90_022570 PF04740 LXG domain of WXG superfamily FFE90_022570 PF14449 Pre-toxin TG FFE90_022570 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues FFE90_022625 PF01464 Transglycosylase SLT domain FFE90_022715 PF18801 response regulator aspartate phosphatase H, N terminal FFE90_022735 PF01476 LysM domain FFE90_022735 PF06725 3D domain FFE90_022745 PF00589 Phage integrase family FFE90_022780 PF10850 Protein of unknown function (DUF2653)