locus-tag class description GNK04_00005 PF11638 DnaA N-terminal domain GNK04_00005 PF08299 Bacterial dnaA protein helix-turn-helix GNK04_00005 PF00308 Bacterial dnaA protein GNK04_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GNK04_00010 PF02767 DNA polymerase III beta subunit, central domain GNK04_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GNK04_00020 PF02463 RecF/RecN/SMC N terminal domain GNK04_00025 PF04025 Domain of unknown function (DUF370) GNK04_00030 PF01751 Toprim domain GNK04_00030 PF00204 DNA gyrase B GNK04_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_00030 PF00986 DNA gyrase B subunit, carboxyl terminus GNK04_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller GNK04_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A GNK04_00055 PF14175 YaaC-like Protein GNK04_00060 PF00478 IMP dehydrogenase / GMP reductase domain GNK04_00060 PF00571 CBS domain GNK04_00065 PF07943 Penicillin-binding protein 5, C-terminal domain GNK04_00065 PF00768 D-alanyl-D-alanine carboxypeptidase GNK04_00070 PF01680 SOR/SNZ family GNK04_00075 PF01174 SNO glutamine amidotransferase family GNK04_00080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNK04_00080 PF02403 Seryl-tRNA synthetase N-terminal domain GNK04_00090 PF01712 Deoxynucleoside kinase GNK04_00095 PF01712 Deoxynucleoside kinase GNK04_00100 PF00999 Sodium/hydrogen exchanger family GNK04_00105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_00110 PF01613 Flavin reductase like domain GNK04_00115 PF01557 Fumarylacetoacetate (FAA) hydrolase family GNK04_00140 PF00857 Isochorismatase family GNK04_00145 PF14437 MafB19-like deaminase GNK04_00160 PF12169 DNA polymerase III subunits gamma and tau domain III GNK04_00165 PF02575 YbaB/EbfC DNA-binding family GNK04_00170 PF13662 Toprim domain GNK04_00170 PF02132 RecR protein GNK04_00175 PF10704 Protein of unknown function (DUF2508) GNK04_00200 PF10764 Inhibitor of sigma-G Gin GNK04_00205 PF01276 Orn/Lys/Arg decarboxylase, major domain GNK04_00205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GNK04_00210 PF02223 Thymidylate kinase GNK04_00215 PF06153 Cyclic-di-AMP receptor GNK04_00220 PF09115 DNA polymerase III, delta subunit, C terminal GNK04_00225 PF04468 PSP1 C-terminal conserved region GNK04_00230 PF06156 Initiation control protein YabA GNK04_00235 PF05175 Methyltransferase small domain GNK04_00240 PF01541 GIY-YIG catalytic domain GNK04_00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNK04_00250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNK04_00250 PF18277 AbrB C-terminal domain GNK04_00255 PF08264 Anticodon-binding domain of tRNA GNK04_00255 PF01588 Putative tRNA binding domain GNK04_00255 PF09334 tRNA synthetases class I (M) GNK04_00260 PF01026 TatD related DNase GNK04_00265 PF07501 G5 domain GNK04_00265 PF06725 3D domain GNK04_00265 PF03990 G5-linked-Ubiquitin-like domain GNK04_00270 PF13662 Toprim domain GNK04_00270 PF13331 Domain of unknown function (DUF4093) GNK04_00275 PF00398 Ribosomal RNA adenine dimethylase GNK04_00280 PF05582 YabG peptidase U57 GNK04_00285 PF06257 Biofilm formation stimulator VEG GNK04_00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNK04_00295 PF08544 GHMP kinases C terminal GNK04_00295 PF00288 GHMP kinases N terminal domain GNK04_00300 PF00156 Phosphoribosyl transferase domain GNK04_00300 PF09182 Bacterial purine repressor, N-terminal GNK04_00305 PF01042 Endoribonuclease L-PSP GNK04_00310 PF04026 SpoVG GNK04_00315 PF00483 Nucleotidyl transferase GNK04_00315 PF00132 Bacterial transferase hexapeptide (six repeats) GNK04_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GNK04_00320 PF14572 Phosphoribosyl synthetase-associated domain GNK04_00325 PF01386 Ribosomal L25p family GNK04_00325 PF14693 Ribosomal protein TL5, C-terminal domain GNK04_00330 PF01195 Peptidyl-tRNA hydrolase GNK04_00335 PF10955 Protein of unknown function (DUF2757) GNK04_00340 PF00271 Helicase conserved C-terminal domain GNK04_00340 PF02559 CarD-like/TRCF domain GNK04_00340 PF00270 DEAD/DEAH box helicase GNK04_00340 PF17757 UvrB interaction domain GNK04_00340 PF03461 TRCF domain GNK04_00345 PF15714 Stage V sporulation protein T C-terminal, transcription factor GNK04_00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNK04_00350 PF01943 Polysaccharide biosynthesis protein GNK04_00350 PF14667 Polysaccharide biosynthesis C-terminal domain GNK04_00355 PF03819 MazG nucleotide pyrophosphohydrolase domain GNK04_00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNK04_00360 PF01479 S4 domain GNK04_00365 PF07873 YabP family GNK04_00370 PF09578 Spore cortex protein YabQ (Spore_YabQ) GNK04_00380 PF00575 S1 RNA binding domain GNK04_00395 PF07228 Stage II sporulation protein E (SpoIIE) GNK04_00400 PF00092 von Willebrand factor type A domain GNK04_00405 PF00069 Protein kinase domain GNK04_00410 PF01171 PP-loop family GNK04_00410 PF11734 TilS substrate C-terminal domain GNK04_00410 PF09179 TilS substrate binding domain GNK04_00425 PF03309 Type III pantothenate kinase GNK04_00430 PF01430 Hsp33 protein GNK04_00435 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_00440 PF00425 chorismate binding enzyme GNK04_00440 PF04715 Anthranilate synthase component I, N terminal region GNK04_00445 PF00117 Glutamine amidotransferase class-I GNK04_00450 PF01063 Amino-transferase class IV GNK04_00455 PF00809 Pterin binding enzyme GNK04_00460 PF02152 Dihydroneopterin aldolase GNK04_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GNK04_00470 PF01381 Helix-turn-helix GNK04_00475 PF01207 Dihydrouridine synthase (Dus) GNK04_00480 PF01336 OB-fold nucleic acid binding domain GNK04_00480 PF00152 tRNA synthetases class II (D, K and N) GNK04_00565 PF05848 CtsR N-terminal HTH domain GNK04_00565 PF17727 CtsR C-terminal dimerization domain GNK04_00570 PF02151 UvrB/uvrC motif GNK04_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GNK04_00580 PF10431 C-terminal, D2-small domain, of ClpB protein GNK04_00580 PF00004 ATPase family associated with various cellular activities (AAA) GNK04_00580 PF17871 AAA lid domain GNK04_00580 PF02861 Clp amino terminal domain, pathogenicity island component GNK04_00580 PF07724 AAA domain (Cdc48 subfamily) GNK04_00585 PF18073 Rubredoxin metal binding domain GNK04_00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNK04_00590 PF10635 DisA bacterial checkpoint controller linker region GNK04_00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GNK04_00605 PF02542 YgbB family GNK04_00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain GNK04_00615 PF00132 Bacterial transferase hexapeptide (six repeats) GNK04_00615 PF06426 Serine acetyltransferase, N-terminal GNK04_00620 PF01406 tRNA synthetases class I (C) catalytic domain GNK04_00620 PF09190 DALR domain GNK04_00625 PF00636 Ribonuclease III domain GNK04_00630 PF00588 SpoU rRNA Methylase family GNK04_00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNK04_00635 PF05991 YacP-like NYN domain GNK04_00640 PF04542 Sigma-70 region 2 GNK04_00640 PF08281 Sigma-70, region 4 GNK04_00645 PF00471 Ribosomal protein L33 GNK04_00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GNK04_00655 PF02357 Transcription termination factor nusG GNK04_00655 PF00467 KOW motif GNK04_00660 PF00298 Ribosomal protein L11, RNA binding domain GNK04_00660 PF03946 Ribosomal protein L11, N-terminal domain GNK04_00665 PF00687 Ribosomal protein L1p/L10e family GNK04_00670 PF00466 Ribosomal protein L10 GNK04_00675 PF16320 Ribosomal protein L7/L12 dimerisation domain GNK04_00675 PF00542 Ribosomal protein L7/L12 C-terminal domain GNK04_00680 PF05175 Methyltransferase small domain GNK04_00685 PF04561 RNA polymerase Rpb2, domain 2 GNK04_00685 PF00562 RNA polymerase Rpb2, domain 6 GNK04_00685 PF04565 RNA polymerase Rpb2, domain 3 GNK04_00685 PF10385 RNA polymerase beta subunit external 1 domain GNK04_00685 PF04563 RNA polymerase beta subunit GNK04_00685 PF04560 RNA polymerase Rpb2, domain 7 GNK04_00690 PF04998 RNA polymerase Rpb1, domain 5 GNK04_00690 PF05000 RNA polymerase Rpb1, domain 4 GNK04_00690 PF04983 RNA polymerase Rpb1, domain 3 GNK04_00690 PF04997 RNA polymerase Rpb1, domain 1 GNK04_00690 PF00623 RNA polymerase Rpb1, domain 2 GNK04_00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GNK04_00700 PF00164 Ribosomal protein S12/S23 GNK04_00705 PF00177 Ribosomal protein S7p/S5e GNK04_00710 PF03144 Elongation factor Tu domain 2 GNK04_00710 PF14492 Elongation Factor G, domain II GNK04_00710 PF03764 Elongation factor G, domain IV GNK04_00710 PF00009 Elongation factor Tu GTP binding domain GNK04_00710 PF00679 Elongation factor G C-terminus GNK04_00715 PF00009 Elongation factor Tu GTP binding domain GNK04_00715 PF03143 Elongation factor Tu C-terminal domain GNK04_00715 PF03144 Elongation factor Tu domain 2 GNK04_00720 PF00338 Ribosomal protein S10p/S20e GNK04_00725 PF00297 Ribosomal protein L3 GNK04_00730 PF00573 Ribosomal protein L4/L1 family GNK04_00735 PF00276 Ribosomal protein L23 GNK04_00740 PF00181 Ribosomal Proteins L2, RNA binding domain GNK04_00740 PF03947 Ribosomal Proteins L2, C-terminal domain GNK04_00745 PF00203 Ribosomal protein S19 GNK04_00750 PF00237 Ribosomal protein L22p/L17e GNK04_00755 PF07650 KH domain GNK04_00755 PF00189 Ribosomal protein S3, C-terminal domain GNK04_00760 PF00252 Ribosomal protein L16p/L10e GNK04_00765 PF00831 Ribosomal L29 protein GNK04_00770 PF00366 Ribosomal protein S17 GNK04_00775 PF00238 Ribosomal protein L14p/L23e GNK04_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GNK04_00780 PF00467 KOW motif GNK04_00785 PF00281 Ribosomal protein L5 GNK04_00785 PF00673 ribosomal L5P family C-terminus GNK04_00790 PF00253 Ribosomal protein S14p/S29e GNK04_00795 PF00410 Ribosomal protein S8 GNK04_00800 PF00347 Ribosomal protein L6 GNK04_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GNK04_00810 PF00333 Ribosomal protein S5, N-terminal domain GNK04_00810 PF03719 Ribosomal protein S5, C-terminal domain GNK04_00815 PF00327 Ribosomal protein L30p/L7e GNK04_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GNK04_00825 PF00344 SecY translocase GNK04_00830 PF05191 Adenylate kinase, active site lid GNK04_00835 PF00557 Metallopeptidase family M24 GNK04_00845 PF01176 Translation initiation factor 1A / IF-1 GNK04_00850 PF00444 Ribosomal protein L36 GNK04_00855 PF00416 Ribosomal protein S13/S18 GNK04_00860 PF00411 Ribosomal protein S11 GNK04_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GNK04_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain GNK04_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GNK04_00870 PF01196 Ribosomal protein L17 GNK04_00875 PF00005 ABC transporter GNK04_00880 PF00005 ABC transporter GNK04_00890 PF01416 tRNA pseudouridine synthase GNK04_00895 PF00572 Ribosomal protein L13 GNK04_00900 PF00380 Ribosomal protein S9/S16 GNK04_00910 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_00915 PF10609 NUBPL iron-transfer P-loop NTPase GNK04_00920 PF17898 Spore germination GerD central core domain GNK04_00925 PF14089 KinB-signalling pathway activation in sporulation GNK04_00930 PF01522 Polysaccharide deacetylase GNK04_01005 PF00491 Arginase family GNK04_01015 PF08281 Sigma-70, region 4 GNK04_01015 PF04542 Sigma-70 region 2 GNK04_01020 PF13490 Putative zinc-finger GNK04_01025 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNK04_01030 PF07949 YbbR-like protein GNK04_01035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNK04_01035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNK04_01035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNK04_01035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNK04_01040 PF01380 SIS domain GNK04_01055 PF02384 N-6 DNA Methylase GNK04_01065 PF11867 Domain of unknown function (DUF3387) GNK04_01065 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GNK04_01065 PF18766 SWI2/SNF2 ATPase GNK04_01075 PF08721 TnsA endonuclease C terminal GNK04_01075 PF08722 TnsA endonuclease N terminal GNK04_01080 PF00665 Integrase core domain GNK04_01085 PF13401 AAA domain GNK04_01085 PF11426 Tn7 transposition regulator TnsC GNK04_01105 PF01810 LysE type translocator GNK04_01110 PF08892 YqcI/YcgG family GNK04_01115 PF00324 Amino acid permease GNK04_01125 PF02583 Metal-sensitive transcriptional repressor GNK04_01130 PF00403 Heavy-metal-associated domain GNK04_01135 PF00403 Heavy-metal-associated domain GNK04_01145 PF00403 Heavy-metal-associated domain GNK04_01150 PF02378 Phosphotransferase system, EIIC GNK04_01150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNK04_01155 PF00874 PRD domain GNK04_01155 PF08279 HTH domain GNK04_01155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNK04_01155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNK04_01155 PF05043 Mga helix-turn-helix domain GNK04_01160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNK04_01165 PF01232 Mannitol dehydrogenase Rossmann domain GNK04_01165 PF08125 Mannitol dehydrogenase C-terminal domain GNK04_01170 PF07457 Protein of unknown function (DUF1516) GNK04_01175 PF03061 Thioesterase superfamily GNK04_01180 PF00797 N-acetyltransferase GNK04_01185 PF04748 Divergent polysaccharide deacetylase GNK04_01190 PF02632 BioY family GNK04_01200 PF00248 Aldo/keto reductase family GNK04_01215 PF00557 Metallopeptidase family M24 GNK04_01215 PF01321 Creatinase/Prolidase N-terminal domain GNK04_01220 PF02600 Disulfide bond formation protein DsbB GNK04_01225 PF00085 Thioredoxin GNK04_01230 PF00106 short chain dehydrogenase GNK04_01240 PF01741 Large-conductance mechanosensitive channel, MscL GNK04_01245 PF12146 Serine aminopeptidase, S33 GNK04_01255 PF01588 Putative tRNA binding domain GNK04_01265 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_01265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNK04_01270 PF02645 Uncharacterised protein, DegV family COG1307 GNK04_01275 PF03851 UV-endonuclease UvdE GNK04_01285 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_01285 PF00107 Zinc-binding dehydrogenase GNK04_01290 PF05175 Methyltransferase small domain GNK04_01300 PF03703 Bacterial PH domain GNK04_01305 PF03703 Bacterial PH domain GNK04_01330 PF01694 Rhomboid family GNK04_01335 PF01648 4'-phosphopantetheinyl transferase superfamily GNK04_01340 PF01256 Carbohydrate kinase GNK04_01340 PF03853 YjeF-related protein N-terminus GNK04_01355 PF01402 Ribbon-helix-helix protein, copG family GNK04_01360 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GNK04_01365 PF08678 Rsbr N terminal GNK04_01365 PF01740 STAS domain GNK04_01370 PF01740 STAS domain GNK04_01375 PF13581 Histidine kinase-like ATPase domain GNK04_01380 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain GNK04_01380 PF07228 Stage II sporulation protein E (SpoIIE) GNK04_01385 PF01740 STAS domain GNK04_01390 PF13581 Histidine kinase-like ATPase domain GNK04_01395 PF04542 Sigma-70 region 2 GNK04_01395 PF04539 Sigma-70 region 3 GNK04_01395 PF04545 Sigma-70, region 4 GNK04_01400 PF07228 Stage II sporulation protein E (SpoIIE) GNK04_01405 PF16921 Tex protein YqgF-like domain GNK04_01405 PF00575 S1 RNA binding domain GNK04_01405 PF17674 HHH domain GNK04_01405 PF09371 Tex-like protein N-terminal domain GNK04_01415 PF10263 SprT-like family GNK04_01415 PF17283 SprT-like zinc ribbon domain GNK04_01495 PF01053 Cys/Met metabolism PLP-dependent enzyme GNK04_01510 PF00586 AIR synthase related protein, N-terminal domain GNK04_01510 PF02769 AIR synthase related protein, C-terminal domain GNK04_01515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GNK04_01520 PF00814 Glycoprotease family GNK04_01525 PF00583 Acetyltransferase (GNAT) family GNK04_01530 PF00814 Glycoprotease family GNK04_01535 PF12848 ABC transporter GNK04_01535 PF16326 ABC transporter C-terminal domain GNK04_01535 PF00005 ABC transporter GNK04_01540 PF01967 MoaC family GNK04_01545 PF02629 CoA binding domain GNK04_01545 PF06971 Putative DNA-binding protein N-terminus GNK04_01550 PF02416 mttA/Hcf106 family GNK04_01555 PF00902 Sec-independent protein translocase protein (TatC) GNK04_01565 PF02517 CPBP intramembrane metalloprotease GNK04_01570 PF00166 Chaperonin 10 Kd subunit GNK04_01575 PF00118 TCP-1/cpn60 chaperonin family GNK04_01580 PF02652 L-lactate permease GNK04_01585 PF07729 FCD domain GNK04_01585 PF00392 Bacterial regulatory proteins, gntR family GNK04_01590 PF02754 Cysteine-rich domain GNK04_01595 PF13183 4Fe-4S dicluster domain GNK04_01595 PF11870 Domain of unknown function (DUF3390) GNK04_01595 PF02589 LUD domain GNK04_01600 PF02589 LUD domain GNK04_01620 PF04343 Protein of unknown function, DUF488 GNK04_01625 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_01625 PF00107 Zinc-binding dehydrogenase GNK04_01630 PF07726 ATPase family associated with various cellular activities (AAA) GNK04_01630 PF17863 AAA lid domain GNK04_01635 PF01882 Protein of unknown function DUF58 GNK04_01640 PF13559 Domain of unknown function (DUF4129) GNK04_01640 PF11992 Domain of unknown function (DUF3488) GNK04_01640 PF01841 Transglutaminase-like superfamily GNK04_01645 PF02540 NAD synthase GNK04_01645 PF00117 Glutamine amidotransferase class-I GNK04_01645 PF00958 GMP synthase C terminal domain GNK04_01650 PF00860 Permease family GNK04_01680 PF01638 HxlR-like helix-turn-helix GNK04_01685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_01695 PF00547 Urease, gamma subunit GNK04_01700 PF00699 Urease beta subunit GNK04_01705 PF00449 Urease alpha-subunit, N-terminal domain GNK04_01705 PF01979 Amidohydrolase family GNK04_01710 PF05194 UreE urease accessory protein, C-terminal domain GNK04_01710 PF02814 UreE urease accessory protein, N-terminal domain GNK04_01715 PF01730 UreF GNK04_01720 PF02492 CobW/HypB/UreG, nucleotide-binding domain GNK04_01725 PF01774 UreD urease accessory protein GNK04_01730 PF13386 Cytochrome C biogenesis protein transmembrane region GNK04_01740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_01745 PF14044 NETI protein GNK04_01750 PF00731 AIR carboxylase GNK04_01755 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GNK04_01755 PF02222 ATP-grasp domain GNK04_01760 PF00206 Lyase GNK04_01760 PF10397 Adenylosuccinate lyase C-terminus GNK04_01765 PF01259 SAICAR synthetase GNK04_01770 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GNK04_01780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GNK04_01780 PF00586 AIR synthase related protein, N-terminal domain GNK04_01780 PF02769 AIR synthase related protein, C-terminal domain GNK04_01785 PF00156 Phosphoribosyl transferase domain GNK04_01790 PF02769 AIR synthase related protein, C-terminal domain GNK04_01790 PF00586 AIR synthase related protein, N-terminal domain GNK04_01795 PF00551 Formyl transferase GNK04_01800 PF01808 AICARFT/IMPCHase bienzyme GNK04_01800 PF02142 MGS-like domain GNK04_01805 PF02844 Phosphoribosylglycinamide synthetase, N domain GNK04_01805 PF02843 Phosphoribosylglycinamide synthetase, C domain GNK04_01805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GNK04_01815 PF13382 Adenine deaminase C-terminal domain GNK04_01815 PF01979 Amidohydrolase family GNK04_01820 PF01371 Trp repressor protein GNK04_01825 PF01884 PcrB family GNK04_01830 PF00580 UvrD/REP helicase N-terminal domain GNK04_01830 PF13361 UvrD-like helicase C-terminal domain GNK04_01835 PF01653 NAD-dependent DNA ligase adenylation domain GNK04_01835 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GNK04_01835 PF03120 NAD-dependent DNA ligase OB-fold domain GNK04_01835 PF00533 BRCA1 C Terminus (BRCT) domain GNK04_01835 PF12826 Helix-hairpin-helix motif GNK04_01840 PF07537 CamS sex pheromone cAM373 precursor GNK04_01845 PF01297 Zinc-uptake complex component A periplasmic GNK04_01845 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GNK04_01850 PF00474 Sodium:solute symporter family GNK04_01855 PF02686 Glu-tRNAGln amidotransferase C subunit GNK04_01860 PF01425 Amidase GNK04_01865 PF02934 GatB/GatE catalytic domain GNK04_01865 PF02637 GatB domain GNK04_01870 PF00781 Diacylglycerol kinase catalytic domain GNK04_01875 PF01938 TRAM domain GNK04_01875 PF05958 tRNA (Uracil-5-)-methyltransferase GNK04_01885 PF00141 Peroxidase GNK04_01895 PF13460 NAD(P)H-binding GNK04_01915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_01915 PF03466 LysR substrate binding domain GNK04_01920 PF00072 Response regulator receiver domain GNK04_01920 PF00196 Bacterial regulatory proteins, luxR family GNK04_01925 PF07730 Histidine kinase GNK04_01930 PF00487 Fatty acid desaturase GNK04_01935 PF01380 SIS domain GNK04_01940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GNK04_01945 PF01638 HxlR-like helix-turn-helix GNK04_01960 PF02652 L-lactate permease GNK04_01965 PF00056 lactate/malate dehydrogenase, NAD binding domain GNK04_01965 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNK04_01980 PF02554 Carbon starvation protein CstA GNK04_01985 PF04397 LytTr DNA-binding domain GNK04_01985 PF00072 Response regulator receiver domain GNK04_01990 PF07694 5TMR of 5TMR-LYT GNK04_01990 PF13492 GAF domain GNK04_01990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_01990 PF06580 Histidine kinase GNK04_01995 PF02954 Bacterial regulatory protein, Fis family GNK04_01995 PF13426 PAS domain GNK04_01995 PF00158 Sigma-54 interaction domain GNK04_02000 PF00202 Aminotransferase class-III GNK04_02005 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNK04_02005 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNK04_02020 PF08000 Bacterial PH domain GNK04_02025 PF12697 Alpha/beta hydrolase family GNK04_02030 PF00356 Bacterial regulatory proteins, lacI family GNK04_02040 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_02045 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_02050 PF00232 Glycosyl hydrolase family 1 GNK04_02055 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain GNK04_02055 PF17189 Glycosyl hydrolase family 30 beta sandwich domain GNK04_02060 PF00722 Glycosyl hydrolases family 16 GNK04_02065 PF00874 PRD domain GNK04_02065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNK04_02065 PF05043 Mga helix-turn-helix domain GNK04_02065 PF08279 HTH domain GNK04_02070 PF02378 Phosphotransferase system, EIIC GNK04_02070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNK04_02070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNK04_02080 PF10138 vWA found in TerF C terminus GNK04_02085 PF02342 TerD domain GNK04_02090 PF02342 TerD domain GNK04_02095 PF02342 TerD domain GNK04_02100 PF03741 Integral membrane protein TerC family GNK04_02115 PF15608 PELOTA RNA binding domain GNK04_02115 PF11202 Phosphoribosyl transferase (PRTase) GNK04_02125 PF14266 Putative component of 'biosynthetic module' GNK04_02130 PF05816 Toxic anion resistance protein (TelA) GNK04_02140 PF01235 Sodium:alanine symporter family GNK04_02150 PF06738 Putative threonine/serine exporter GNK04_02155 PF06738 Putative threonine/serine exporter GNK04_02155 PF12821 Threonine/Serine exporter, ThrE GNK04_02160 PF07681 DoxX GNK04_02165 PF13462 Thioredoxin GNK04_02170 PF03061 Thioesterase superfamily GNK04_02175 PF01594 AI-2E family transporter GNK04_02180 PF00296 Luciferase-like monooxygenase GNK04_02185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNK04_02185 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_02190 PF00300 Histidine phosphatase superfamily (branch 1) GNK04_02195 PF01235 Sodium:alanine symporter family GNK04_02200 PF07690 Major Facilitator Superfamily GNK04_02205 PF01047 MarR family GNK04_02210 PF01266 FAD dependent oxidoreductase GNK04_02210 PF00355 Rieske [2Fe-2S] domain GNK04_02215 PF12848 ABC transporter GNK04_02215 PF00005 ABC transporter GNK04_02220 PF04231 Endonuclease I GNK04_02235 PF00106 short chain dehydrogenase GNK04_02240 PF00158 Sigma-54 interaction domain GNK04_02270 PF13538 UvrD-like helicase C-terminal domain GNK04_02280 PF09962 Uncharacterized conserved protein (DUF2196) GNK04_02305 PF07730 Histidine kinase GNK04_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_02305 PF00672 HAMP domain GNK04_02310 PF00072 Response regulator receiver domain GNK04_02310 PF00196 Bacterial regulatory proteins, luxR family GNK04_02315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_02315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_02325 PF16884 N-terminal domain of oxidoreductase GNK04_02325 PF00107 Zinc-binding dehydrogenase GNK04_02330 PF09844 Uncharacterized conserved protein (COG2071) GNK04_02335 PF00892 EamA-like transporter family GNK04_02350 PF00005 ABC transporter GNK04_02350 PF13732 Domain of unknown function (DUF4162) GNK04_02365 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GNK04_02375 PF00708 Acylphosphatase GNK04_02380 PF09529 Integral membrane protein (intg_mem_TP0381) GNK04_02385 PF13426 PAS domain GNK04_02385 PF01740 STAS domain GNK04_02390 PF10388 EAL-domain associated signalling protein domain GNK04_02390 PF00563 EAL domain GNK04_02395 PF01894 Uncharacterised protein family UPF0047 GNK04_02400 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNK04_02415 PF03631 Virulence factor BrkB GNK04_02425 PF18846 Bacterial archaeo-eukaryotic release factor family 5 GNK04_02440 PF00578 AhpC/TSA family GNK04_02445 PF07690 Major Facilitator Superfamily GNK04_02455 PF16242 Pyridoxamine 5'-phosphate oxidase like GNK04_02460 PF01554 MatE GNK04_02470 PF14167 YfkD-like protein GNK04_02475 PF01522 Polysaccharide deacetylase GNK04_02480 PF00730 HhH-GPD superfamily base excision DNA repair protein GNK04_02485 PF01938 TRAM domain GNK04_02485 PF05958 tRNA (Uracil-5-)-methyltransferase GNK04_02505 PF01979 Amidohydrolase family GNK04_02510 PF01370 NAD dependent epimerase/dehydratase family GNK04_02510 PF08338 Domain of unknown function (DUF1731) GNK04_02515 PF02631 RecX family GNK04_02520 PF00106 short chain dehydrogenase GNK04_02525 PF08838 Protein of unknown function (DUF1811) GNK04_02535 PF08176 Small acid-soluble spore protein K family GNK04_02540 PF14043 WVELL protein GNK04_02545 PF04307 LexA-binding, inner membrane-associated putative hydrolase GNK04_02550 PF14815 NUDIX domain GNK04_02550 PF00730 HhH-GPD superfamily base excision DNA repair protein GNK04_02570 PF02586 SOS response associated peptidase (SRAP) GNK04_02580 PF04167 Protein of unknown function (DUF402) GNK04_02585 PF00005 ABC transporter GNK04_02585 PF00664 ABC transporter transmembrane region GNK04_02590 PF00005 ABC transporter GNK04_02590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNK04_02595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNK04_02595 PF00005 ABC transporter GNK04_02600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNK04_02615 PF06081 Aromatic acid exporter family member 1 GNK04_02620 PF00202 Aminotransferase class-III GNK04_02625 PF00005 ABC transporter GNK04_02640 PF04542 Sigma-70 region 2 GNK04_02640 PF04545 Sigma-70, region 4 GNK04_02655 PF07885 Ion channel GNK04_02660 PF00578 AhpC/TSA family GNK04_02665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNK04_02665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNK04_02670 PF01923 Cobalamin adenosyltransferase GNK04_02675 PF01475 Ferric uptake regulator family GNK04_02680 PF11023 Zinc-ribbon containing domain GNK04_02685 PF14540 Nucleotidyltransferase-like GNK04_02685 PF18576 Helix-turn-helix domain GNK04_02790 PF01323 DSBA-like thioredoxin domain GNK04_02795 PF09628 YvfG protein GNK04_02800 PF01588 Putative tRNA binding domain GNK04_02800 PF03147 Ferredoxin-fold anticodon binding domain GNK04_02800 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GNK04_02800 PF03483 B3/4 domain GNK04_02800 PF03484 tRNA synthetase B5 domain GNK04_02810 PF08331 Domain of unknown function (DUF1730) GNK04_02815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GNK04_02815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GNK04_02825 PF12671 Putative amidase domain GNK04_02830 PF00588 SpoU rRNA Methylase family GNK04_02840 PF06798 PrkA serine protein kinase C-terminal domain GNK04_02840 PF08298 PrkA AAA domain GNK04_02845 PF10502 Signal peptidase, peptidase S26 GNK04_02850 PF04285 Protein of unknown function (DUF444) GNK04_02855 PF03772 Competence protein GNK04_02855 PF13567 Domain of unknown function (DUF4131) GNK04_02855 PF00753 Metallo-beta-lactamase superfamily GNK04_02860 PF00571 CBS domain GNK04_02865 PF00795 Carbon-nitrogen hydrolase GNK04_02865 PF00583 Acetyltransferase (GNAT) family GNK04_02870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNK04_02870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNK04_02870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNK04_02870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNK04_02880 PF02583 Metal-sensitive transcriptional repressor GNK04_02885 PF00578 AhpC/TSA family GNK04_02900 PF00924 Mechanosensitive ion channel GNK04_02905 PF01758 Sodium Bile acid symporter family GNK04_02910 PF04293 SpoVR like protein GNK04_02925 PF02386 Cation transport protein GNK04_02930 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNK04_02950 PF17912 MalK OB fold domain GNK04_02950 PF03459 TOBE domain GNK04_02950 PF00005 ABC transporter GNK04_02955 PF13556 PucR C-terminal helix-turn-helix domain GNK04_02965 PF17277 Family of unknown function (DUF5342) GNK04_02975 PF14398 YheC/D like ATP-grasp GNK04_02980 PF14398 YheC/D like ATP-grasp GNK04_02995 PF06133 Control of competence regulator ComK, YlbF/YmcA GNK04_03010 PF00171 Aldehyde dehydrogenase family GNK04_03020 PF13732 Domain of unknown function (DUF4162) GNK04_03020 PF00005 ABC transporter GNK04_03035 PF13514 AAA domain GNK04_03040 PF00486 Transcriptional regulatory protein, C terminal GNK04_03040 PF00072 Response regulator receiver domain GNK04_03045 PF00512 His Kinase A (phospho-acceptor) domain GNK04_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_03045 PF00672 HAMP domain GNK04_03050 PF01336 OB-fold nucleic acid binding domain GNK04_03050 PF01966 HD domain GNK04_03055 PF07690 Major Facilitator Superfamily GNK04_03090 PF01047 MarR family GNK04_03105 PF06803 Protein of unknown function (DUF1232) GNK04_03110 PF17099 Tryptophan transporter TrpP GNK04_03115 PF00266 Aminotransferase class-V GNK04_03125 PF01230 HIT domain GNK04_03130 PF00005 ABC transporter GNK04_03135 PF05975 Bacterial ABC transporter protein EcsB GNK04_03140 PF12787 EcsC protein family GNK04_03150 PF01965 DJ-1/PfpI family GNK04_03160 PF01569 PAP2 superfamily GNK04_03165 PF00781 Diacylglycerol kinase catalytic domain GNK04_03170 PF01226 Formate/nitrite transporter GNK04_03180 PF03992 Antibiotic biosynthesis monooxygenase GNK04_03185 PF00912 Transglycosylase GNK04_03185 PF00905 Penicillin binding protein transpeptidase domain GNK04_03190 PF01208 Uroporphyrinogen decarboxylase (URO-D) GNK04_03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_03205 PF00512 His Kinase A (phospho-acceptor) domain GNK04_03210 PF00440 Bacterial regulatory proteins, tetR family GNK04_03210 PF17932 Tetracyclin repressor-like, C-terminal domain GNK04_03220 PF00005 ABC transporter GNK04_03220 PF00571 CBS domain GNK04_03225 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_03230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNK04_03235 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNK04_03240 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_03245 PF00005 ABC transporter GNK04_03245 PF00571 CBS domain GNK04_03255 PF00005 ABC transporter GNK04_03265 PF00456 Transketolase, thiamine diphosphate binding domain GNK04_03265 PF02780 Transketolase, C-terminal domain GNK04_03265 PF02779 Transketolase, pyrimidine binding domain GNK04_03270 PF04198 Putative sugar-binding domain GNK04_03275 PF12706 Beta-lactamase superfamily domain GNK04_03290 PF10437 Bacterial lipoate protein ligase C-terminus GNK04_03290 PF03099 Biotin/lipoate A/B protein ligase family GNK04_03295 PF13193 AMP-binding enzyme C-terminal domain GNK04_03295 PF00501 AMP-binding enzyme GNK04_03300 PF05138 Phenylacetic acid catabolic protein GNK04_03315 PF01883 Iron-sulfur cluster assembly protein GNK04_03325 PF00378 Enoyl-CoA hydratase/isomerase GNK04_03330 PF00378 Enoyl-CoA hydratase/isomerase GNK04_03335 PF07848 PaaX-like protein GNK04_03335 PF08223 PaaX-like protein C-terminal domain GNK04_03340 PF00132 Bacterial transferase hexapeptide (six repeats) GNK04_03345 PF03060 Nitronate monooxygenase GNK04_03355 PF02653 Branched-chain amino acid transport system / permease component GNK04_03360 PF00005 ABC transporter GNK04_03360 PF09383 NIL domain GNK04_03370 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNK04_03370 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNK04_03375 PF00676 Dehydrogenase E1 component GNK04_03380 PF02779 Transketolase, pyrimidine binding domain GNK04_03380 PF02780 Transketolase, C-terminal domain GNK04_03385 PF00364 Biotin-requiring enzyme GNK04_03385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNK04_03385 PF02817 e3 binding domain GNK04_03390 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_03390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNK04_03395 PF01381 Helix-turn-helix GNK04_03400 PF03591 AzlC protein GNK04_03420 PF01435 Peptidase family M48 GNK04_03420 PF16491 CAAX prenyl protease N-terminal, five membrane helices GNK04_03430 PF00578 AhpC/TSA family GNK04_03435 PF10011 Predicted membrane protein (DUF2254) GNK04_03455 PF13302 Acetyltransferase (GNAT) domain GNK04_03460 PF13396 Phospholipase_D-nuclease N-terminal GNK04_03460 PF13091 PLD-like domain GNK04_03465 PF06103 Bacterial protein of unknown function (DUF948) GNK04_03490 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GNK04_03505 PF00581 Rhodanese-like domain GNK04_03515 PF00004 ATPase family associated with various cellular activities (AAA) GNK04_03515 PF07724 AAA domain (Cdc48 subfamily) GNK04_03515 PF10431 C-terminal, D2-small domain, of ClpB protein GNK04_03515 PF17871 AAA lid domain GNK04_03535 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_03535 PF00107 Zinc-binding dehydrogenase GNK04_03545 PF08876 Domain of unknown function (DUF1836) GNK04_03555 PF00293 NUDIX domain GNK04_03575 PF04542 Sigma-70 region 2 GNK04_03575 PF08281 Sigma-70, region 4 GNK04_03585 PF13302 Acetyltransferase (GNAT) domain GNK04_03620 PF08281 Sigma-70, region 4 GNK04_03620 PF04542 Sigma-70 region 2 GNK04_03625 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_03650 PF03323 Bacillus/Clostridium GerA spore germination protein GNK04_03660 PF03485 Arginyl tRNA synthetase N terminal domain GNK04_03660 PF00750 tRNA synthetases class I (R) GNK04_03660 PF05746 DALR anticodon binding domain GNK04_03665 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNK04_03675 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GNK04_03680 PF01022 Bacterial regulatory protein, arsR family GNK04_03690 PF09297 NADH pyrophosphatase zinc ribbon domain GNK04_03690 PF00293 NUDIX domain GNK04_03695 PF01022 Bacterial regulatory protein, arsR family GNK04_03700 PF00106 short chain dehydrogenase GNK04_03705 PF02630 SCO1/SenC GNK04_03710 PF18324 Hypothetical protein TT1725 GNK04_03710 PF00180 Isocitrate/isopropylmalate dehydrogenase GNK04_03715 PF03323 Bacillus/Clostridium GerA spore germination protein GNK04_03720 PF03845 Spore germination protein GNK04_03725 PF05504 Spore germination B3/ GerAC like, C-terminal GNK04_03730 PF03358 NADPH-dependent FMN reductase GNK04_03735 PF00196 Bacterial regulatory proteins, luxR family GNK04_03735 PF00072 Response regulator receiver domain GNK04_03740 PF07730 Histidine kinase GNK04_03740 PF13185 GAF domain GNK04_03745 PF02386 Cation transport protein GNK04_03750 PF00582 Universal stress protein family GNK04_03755 PF01381 Helix-turn-helix GNK04_03775 PF00583 Acetyltransferase (GNAT) family GNK04_03780 PF13426 PAS domain GNK04_03780 PF00158 Sigma-54 interaction domain GNK04_03780 PF02954 Bacterial regulatory protein, Fis family GNK04_03785 PF01144 Coenzyme A transferase GNK04_03790 PF01144 Coenzyme A transferase GNK04_03810 PF03193 RsgA GTPase GNK04_03825 PF00155 Aminotransferase class I and II GNK04_03825 PF00392 Bacterial regulatory proteins, gntR family GNK04_03830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNK04_03835 PF01425 Amidase GNK04_03840 PF12822 ECF transporter, substrate-specific component GNK04_03845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNK04_03850 PF07454 Stage II sporulation protein P (SpoIIP) GNK04_03855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_03855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_03860 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNK04_03860 PF07504 Fungalysin/Thermolysin Propeptide Motif GNK04_03860 PF03413 Peptidase propeptide and YPEB domain GNK04_03860 PF01447 Thermolysin metallopeptidase, catalytic domain GNK04_03865 PF00999 Sodium/hydrogen exchanger family GNK04_03875 PF13180 PDZ domain GNK04_03880 PF02592 Putative vitamin uptake transporter GNK04_03885 PF14489 QueF-like protein GNK04_03900 PF03009 Glycerophosphoryl diester phosphodiesterase family GNK04_03910 PF02653 Branched-chain amino acid transport system / permease component GNK04_03915 PF00005 ABC transporter GNK04_03920 PF13407 Periplasmic binding protein domain GNK04_03925 PF01008 Initiation factor 2 subunit family GNK04_03930 PF01636 Phosphotransferase enzyme family GNK04_03935 PF00795 Carbon-nitrogen hydrolase GNK04_03940 PF00155 Aminotransferase class I and II GNK04_03945 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GNK04_03945 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GNK04_03955 PF00596 Class II Aldolase and Adducin N-terminal domain GNK04_03960 PF03079 ARD/ARD' family GNK04_03965 PF00583 Acetyltransferase (GNAT) family GNK04_03975 PF13188 PAS domain GNK04_03975 PF00512 His Kinase A (phospho-acceptor) domain GNK04_03975 PF13426 PAS domain GNK04_03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_03975 PF00989 PAS fold GNK04_03980 PF12832 MFS_1 like family GNK04_04000 PF02386 Cation transport protein GNK04_04025 PF03323 Bacillus/Clostridium GerA spore germination protein GNK04_04030 PF03845 Spore germination protein GNK04_04040 PF00221 Aromatic amino acid lyase GNK04_04045 PF01037 Lrp/AsnC ligand binding domain GNK04_04050 PF00155 Aminotransferase class I and II GNK04_04060 PF01242 6-pyruvoyl tetrahydropterin synthase GNK04_04065 PF04055 Radical SAM superfamily GNK04_04070 PF06508 Queuosine biosynthesis protein QueC GNK04_04075 PF00285 Citrate synthase, C-terminal domain GNK04_04080 PF03466 LysR substrate binding domain GNK04_04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_04095 PF13180 PDZ domain GNK04_04105 PF18665 Tetracyclin repressor-like, C-terminal domain GNK04_04105 PF00440 Bacterial regulatory proteins, tetR family GNK04_04110 PF00893 Small Multidrug Resistance protein GNK04_04115 PF00893 Small Multidrug Resistance protein GNK04_04120 PF16326 ABC transporter C-terminal domain GNK04_04120 PF00005 ABC transporter GNK04_04120 PF12848 ABC transporter GNK04_04125 PF02522 Aminoglycoside 3-N-acetyltransferase GNK04_04130 PF00512 His Kinase A (phospho-acceptor) domain GNK04_04130 PF00989 PAS fold GNK04_04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_04130 PF08447 PAS fold GNK04_04135 PF03630 Fumble GNK04_04150 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_04190 PF00583 Acetyltransferase (GNAT) family GNK04_04195 PF09335 SNARE associated Golgi protein GNK04_04215 PF02525 Flavodoxin-like fold GNK04_04220 PF03352 Methyladenine glycosylase GNK04_04220 PF13673 Acetyltransferase (GNAT) domain GNK04_04220 PF00117 Glutamine amidotransferase class-I GNK04_04220 PF00958 GMP synthase C terminal domain GNK04_04220 PF13302 Acetyltransferase (GNAT) domain GNK04_04235 PF00293 NUDIX domain GNK04_04250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNK04_04250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNK04_04250 PF00205 Thiamine pyrophosphate enzyme, central domain GNK04_04255 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GNK04_04265 PF00892 EamA-like transporter family GNK04_04280 PF13439 Glycosyltransferase Family 4 GNK04_04290 PF07690 Major Facilitator Superfamily GNK04_04300 PF01381 Helix-turn-helix GNK04_04320 PF01479 S4 domain GNK04_04320 PF00579 tRNA synthetases class I (W and Y) GNK04_04325 PF13115 YtkA-like GNK04_04335 PF00149 Calcineurin-like phosphoesterase GNK04_04340 PF13419 Haloacid dehalogenase-like hydrolase GNK04_04345 PF00857 Isochorismatase family GNK04_04350 PF02566 OsmC-like protein GNK04_04355 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNK04_04365 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_04375 PF02535 ZIP Zinc transporter GNK04_04385 PF00589 Phage integrase family GNK04_04390 PF00999 Sodium/hydrogen exchanger family GNK04_04390 PF03471 Transporter associated domain GNK04_04390 PF02080 TrkA-C domain GNK04_04395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GNK04_04395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GNK04_04395 PF06827 Zinc finger found in FPG and IleRS GNK04_04400 PF00356 Bacterial regulatory proteins, lacI family GNK04_04405 PF00294 pfkB family carbohydrate kinase GNK04_04410 PF05025 RbsD / FucU transport protein family GNK04_04415 PF00005 ABC transporter GNK04_04420 PF02653 Branched-chain amino acid transport system / permease component GNK04_04425 PF13407 Periplasmic binding protein domain GNK04_04430 PF01636 Phosphotransferase enzyme family GNK04_04435 PF00248 Aldo/keto reductase family GNK04_04475 PF07690 Major Facilitator Superfamily GNK04_04480 PF00884 Sulfatase GNK04_04495 PF00313 'Cold-shock' DNA-binding domain GNK04_04500 PF01740 STAS domain GNK04_04500 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GNK04_04510 PF02733 Dak1 domain GNK04_04515 PF02734 DAK2 domain GNK04_04520 PF03610 PTS system fructose IIA component GNK04_04525 PF00667 FAD binding domain GNK04_04525 PF00258 Flavodoxin GNK04_04525 PF00175 Oxidoreductase NAD-binding domain GNK04_04525 PF00067 Cytochrome P450 GNK04_04530 PF00440 Bacterial regulatory proteins, tetR family GNK04_04530 PF16295 Tetracyclin repressor-like, C-terminal domain GNK04_04535 PF13823 Alcohol dehydrogenase GroES-associated GNK04_04535 PF00107 Zinc-binding dehydrogenase GNK04_04535 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_04545 PF00753 Metallo-beta-lactamase superfamily GNK04_04545 PF16123 Hydroxyacylglutathione hydrolase C-terminus GNK04_04550 PF07690 Major Facilitator Superfamily GNK04_04570 PF00005 ABC transporter GNK04_04580 PF01590 GAF domain GNK04_04580 PF00158 Sigma-54 interaction domain GNK04_04580 PF02954 Bacterial regulatory protein, Fis family GNK04_04585 PF00676 Dehydrogenase E1 component GNK04_04590 PF02779 Transketolase, pyrimidine binding domain GNK04_04590 PF02780 Transketolase, C-terminal domain GNK04_04595 PF00364 Biotin-requiring enzyme GNK04_04595 PF02817 e3 binding domain GNK04_04595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNK04_04600 PF08943 CsiD GNK04_04605 PF01266 FAD dependent oxidoreductase GNK04_04610 PF00756 Putative esterase GNK04_04620 PF04542 Sigma-70 region 2 GNK04_04620 PF08281 Sigma-70, region 4 GNK04_04640 PF03480 Bacterial extracellular solute-binding protein, family 7 GNK04_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_04645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNK04_04645 PF17203 Single cache domain 3 GNK04_04650 PF08279 HTH domain GNK04_04650 PF00072 Response regulator receiver domain GNK04_04655 PF16868 NMT1-like family GNK04_04675 PF17853 GGDEF-like domain GNK04_04675 PF13556 PucR C-terminal helix-turn-helix domain GNK04_04680 PF01619 Proline dehydrogenase GNK04_04685 PF00171 Aldehyde dehydrogenase family GNK04_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_04695 PF00512 His Kinase A (phospho-acceptor) domain GNK04_04695 PF13426 PAS domain GNK04_04695 PF13188 PAS domain GNK04_04695 PF00989 PAS fold GNK04_04705 PF08241 Methyltransferase domain GNK04_04710 PF13649 Methyltransferase domain GNK04_04715 PF03741 Integral membrane protein TerC family GNK04_04720 PF13344 Haloacid dehalogenase-like hydrolase GNK04_04720 PF00293 NUDIX domain GNK04_04725 PF13393 Histidyl-tRNA synthetase GNK04_04725 PF03129 Anticodon binding domain GNK04_04740 PF00107 Zinc-binding dehydrogenase GNK04_04740 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_04755 PF01252 Signal peptidase (SPase) II GNK04_04760 PF03960 ArsC family GNK04_04765 PF07690 Major Facilitator Superfamily GNK04_04805 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNK04_04815 PF00005 ABC transporter GNK04_04825 PF00990 Diguanylate cyclase, GGDEF domain GNK04_04825 PF00563 EAL domain GNK04_04825 PF03707 Bacterial signalling protein N terminal repeat GNK04_04830 PF04055 Radical SAM superfamily GNK04_04830 PF06968 Biotin and Thiamin Synthesis associated domain GNK04_04835 PF01740 STAS domain GNK04_04835 PF13426 PAS domain GNK04_04845 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_04850 PF03575 Peptidase family S51 GNK04_04860 PF01740 STAS domain GNK04_04865 PF01638 HxlR-like helix-turn-helix GNK04_04870 PF00009 Elongation factor Tu GTP binding domain GNK04_04870 PF16658 Class II release factor RF3, C-terminal domain GNK04_04870 PF03144 Elongation factor Tu domain 2 GNK04_04880 PF07690 Major Facilitator Superfamily GNK04_04885 PF00158 Sigma-54 interaction domain GNK04_04885 PF00989 PAS fold GNK04_04885 PF00158 Sigma-54 interaction domain GNK04_04885 PF00989 PAS fold GNK04_04885 PF02954 Bacterial regulatory protein, Fis family GNK04_04885 PF02954 Bacterial regulatory protein, Fis family GNK04_04890 PF03606 C4-dicarboxylate anaerobic carrier GNK04_04895 PF01979 Amidohydrolase family GNK04_04910 PF12706 Beta-lactamase superfamily domain GNK04_04915 PF01037 Lrp/AsnC ligand binding domain GNK04_04925 PF03575 Peptidase family S51 GNK04_04930 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNK04_04935 PF00253 Ribosomal protein S14p/S29e GNK04_04945 PF13411 MerR HTH family regulatory protein GNK04_04950 PF00571 CBS domain GNK04_04950 PF01595 Cyclin M transmembrane N-terminal domain GNK04_04950 PF03471 Transporter associated domain GNK04_04955 PF00069 Protein kinase domain GNK04_04970 PF02683 Cytochrome C biogenesis protein transmembrane region GNK04_04975 PF00578 AhpC/TSA family GNK04_04980 PF00072 Response regulator receiver domain GNK04_04980 PF00486 Transcriptional regulatory protein, C terminal GNK04_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_04985 PF00512 His Kinase A (phospho-acceptor) domain GNK04_04985 PF00672 HAMP domain GNK04_04990 PF07687 Peptidase dimerisation domain GNK04_04990 PF01546 Peptidase family M20/M25/M40 GNK04_04995 PF02435 Levansucrase/Invertase GNK04_05000 PF02435 Levansucrase/Invertase GNK04_05005 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_05005 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_05015 PF08450 SMP-30/Gluconolactonase/LRE-like region GNK04_05020 PF05223 NTF2-like N-terminal transpeptidase domain GNK04_05020 PF03717 Penicillin-binding Protein dimerisation domain GNK04_05020 PF00905 Penicillin binding protein transpeptidase domain GNK04_05030 PF13302 Acetyltransferase (GNAT) domain GNK04_05040 PF12146 Serine aminopeptidase, S33 GNK04_05055 PF00474 Sodium:solute symporter family GNK04_05065 PF12833 Helix-turn-helix domain GNK04_05070 PF16875 Glycosyl hydrolase family 36 N-terminal domain GNK04_05070 PF16874 Glycosyl hydrolase family 36 C-terminal domain GNK04_05075 PF10509 Galactokinase galactose-binding signature GNK04_05075 PF08544 GHMP kinases C terminal GNK04_05075 PF00288 GHMP kinases N terminal domain GNK04_05080 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GNK04_05080 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GNK04_05085 PF00474 Sodium:solute symporter family GNK04_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_05090 PF00512 His Kinase A (phospho-acceptor) domain GNK04_05095 PF02954 Bacterial regulatory protein, Fis family GNK04_05095 PF00158 Sigma-54 interaction domain GNK04_05095 PF00072 Response regulator receiver domain GNK04_05100 PF01566 Natural resistance-associated macrophage protein GNK04_05105 PF02682 Carboxyltransferase domain, subdomain C and D GNK04_05110 PF03746 LamB/YcsF family GNK04_05115 PF02626 Carboxyltransferase domain, subdomain A and B GNK04_05120 PF00364 Biotin-requiring enzyme GNK04_05125 PF02785 Biotin carboxylase C-terminal domain GNK04_05125 PF00289 Biotin carboxylase, N-terminal domain GNK04_05125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNK04_05130 PF07286 Protein of unknown function (DUF1445) GNK04_05155 PF04463 Protein of unknown function (DUF523) GNK04_05165 PF11188 Protein of unknown function (DUF2975) GNK04_05170 PF13443 Cro/C1-type HTH DNA-binding domain GNK04_05205 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_05205 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_05210 PF04854 Protein of unknown function, DUF624 GNK04_05215 PF00356 Bacterial regulatory proteins, lacI family GNK04_05220 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_05225 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_05230 PF01547 Bacterial extracellular solute-binding protein GNK04_05235 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_05235 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_05240 PF06445 GyrI-like small molecule binding domain GNK04_05240 PF12833 Helix-turn-helix domain GNK04_05260 PF07875 Coat F domain GNK04_05265 PF00753 Metallo-beta-lactamase superfamily GNK04_05270 PF00067 Cytochrome P450 GNK04_05275 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GNK04_05280 PF00478 IMP dehydrogenase / GMP reductase domain GNK04_05315 PF02666 Phosphatidylserine decarboxylase GNK04_05325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GNK04_05325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNK04_05330 PF17853 GGDEF-like domain GNK04_05330 PF06018 CodY GAF-like domain GNK04_05330 PF13556 PucR C-terminal helix-turn-helix domain GNK04_05335 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GNK04_05335 PF00391 PEP-utilising enzyme, mobile domain GNK04_05335 PF02896 PEP-utilising enzyme, TIM barrel domain GNK04_05340 PF07690 Major Facilitator Superfamily GNK04_05365 PF03390 2-hydroxycarboxylate transporter family GNK04_05370 PF00072 Response regulator receiver domain GNK04_05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_05375 PF17203 Single cache domain 3 GNK04_05375 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNK04_05375 PF00989 PAS fold GNK04_05380 PF07690 Major Facilitator Superfamily GNK04_05385 PF13673 Acetyltransferase (GNAT) domain GNK04_05385 PF04229 GrpB protein GNK04_05390 PF01032 FecCD transport family GNK04_05395 PF01032 FecCD transport family GNK04_05400 PF00005 ABC transporter GNK04_05405 PF01497 Periplasmic binding protein GNK04_05415 PF00884 Sulfatase GNK04_05430 PF07690 Major Facilitator Superfamily GNK04_05460 PF13673 Acetyltransferase (GNAT) domain GNK04_05470 PF00067 Cytochrome P450 GNK04_05475 PF01226 Formate/nitrite transporter GNK04_05485 PF13302 Acetyltransferase (GNAT) domain GNK04_05495 PF06800 Sugar transport protein GNK04_05500 PF00512 His Kinase A (phospho-acceptor) domain GNK04_05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_05515 PF02254 TrkA-N domain GNK04_05515 PF02080 TrkA-C domain GNK04_05520 PF02386 Cation transport protein GNK04_05530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_05535 PF01022 Bacterial regulatory protein, arsR family GNK04_05540 PF01022 Bacterial regulatory protein, arsR family GNK04_05545 PF02040 Arsenical pump membrane protein GNK04_05550 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNK04_05565 PF04226 Transglycosylase associated protein GNK04_05570 PF01740 STAS domain GNK04_05585 PF01699 Sodium/calcium exchanger protein GNK04_05590 PF00199 Catalase GNK04_05590 PF06628 Catalase-related immune-responsive GNK04_05615 PF00860 Permease family GNK04_05625 PF00120 Glutamine synthetase, catalytic domain GNK04_05625 PF03951 Glutamine synthetase, beta-Grasp domain GNK04_05630 PF01497 Periplasmic binding protein GNK04_05635 PF01032 FecCD transport family GNK04_05640 PF01032 FecCD transport family GNK04_05645 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_05650 PF00005 ABC transporter GNK04_05655 PF00583 Acetyltransferase (GNAT) family GNK04_05660 PF00248 Aldo/keto reductase family GNK04_05675 PF14572 Phosphoribosyl synthetase-associated domain GNK04_05675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GNK04_05715 PF08858 IDEAL domain GNK04_05715 PF08864 UPF0302 domain GNK04_05725 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GNK04_05725 PF11611 Domain of unknown function (DUF4352) GNK04_05730 PF00245 Alkaline phosphatase GNK04_05740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_05740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_05745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNK04_05745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNK04_05755 PF00107 Zinc-binding dehydrogenase GNK04_05755 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_05775 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_05780 PF13344 Haloacid dehalogenase-like hydrolase GNK04_05780 PF00293 NUDIX domain GNK04_05795 PF00106 short chain dehydrogenase GNK04_05810 PF01593 Flavin containing amine oxidoreductase GNK04_05820 PF02525 Flavodoxin-like fold GNK04_05825 PF00248 Aldo/keto reductase family GNK04_05865 PF00072 Response regulator receiver domain GNK04_05865 PF00486 Transcriptional regulatory protein, C terminal GNK04_05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_05870 PF18719 ArlS sensor domain GNK04_05870 PF00512 His Kinase A (phospho-acceptor) domain GNK04_05885 PF00857 Isochorismatase family GNK04_05890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_05925 PF00005 ABC transporter GNK04_05925 PF00664 ABC transporter transmembrane region GNK04_05930 PF07690 Major Facilitator Superfamily GNK04_05935 PF06445 GyrI-like small molecule binding domain GNK04_05935 PF13411 MerR HTH family regulatory protein GNK04_05940 PF07690 Major Facilitator Superfamily GNK04_05970 PF00176 SNF2 family N-terminal domain GNK04_05970 PF00271 Helicase conserved C-terminal domain GNK04_05970 PF12419 SNF2 Helicase protein GNK04_05980 PF08892 YqcI/YcgG family GNK04_05985 PF13302 Acetyltransferase (GNAT) domain GNK04_06025 PF13419 Haloacid dehalogenase-like hydrolase GNK04_06030 PF04239 Protein of unknown function (DUF421) GNK04_06040 PF00326 Prolyl oligopeptidase family GNK04_06050 PF12650 Domain of unknown function (DUF3784) GNK04_06070 PF00248 Aldo/keto reductase family GNK04_06080 PF01966 HD domain GNK04_06085 PF05257 CHAP domain GNK04_06085 PF01476 LysM domain GNK04_06110 PF04264 YceI-like domain GNK04_06115 PF00080 Copper/zinc superoxide dismutase (SODC) GNK04_06120 PF00873 AcrB/AcrD/AcrF family GNK04_06125 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_06130 PF00571 CBS domain GNK04_06130 PF00005 ABC transporter GNK04_06135 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_06155 PF00144 Beta-lactamase GNK04_06195 PF08241 Methyltransferase domain GNK04_06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_06200 PF03466 LysR substrate binding domain GNK04_06210 PF00326 Prolyl oligopeptidase family GNK04_06225 PF02245 Methylpurine-DNA glycosylase (MPG) GNK04_06265 PF00474 Sodium:solute symporter family GNK04_06280 PF00465 Iron-containing alcohol dehydrogenase GNK04_06285 PF00171 Aldehyde dehydrogenase family GNK04_06315 PF01047 MarR family GNK04_06320 PF00583 Acetyltransferase (GNAT) family GNK04_06325 PF04299 Putative FMN-binding domain GNK04_06330 PF11553 Protein of unknown function (DUF3231) GNK04_06335 PF04239 Protein of unknown function (DUF421) GNK04_06360 PF13180 PDZ domain GNK04_06370 PF01098 Cell cycle protein GNK04_06390 PF00403 Heavy-metal-associated domain GNK04_06395 PF03860 Domain of Unknown Function (DUF326) GNK04_06405 PF00072 Response regulator receiver domain GNK04_06405 PF00486 Transcriptional regulatory protein, C terminal GNK04_06415 PF00394 Multicopper oxidase GNK04_06415 PF07731 Multicopper oxidase GNK04_06415 PF07732 Multicopper oxidase GNK04_06415 PF10518 TAT (twin-arginine translocation) pathway signal sequence GNK04_06430 PF07732 Multicopper oxidase GNK04_06430 PF07731 Multicopper oxidase GNK04_06430 PF00394 Multicopper oxidase GNK04_06435 PF07563 Protein of unknown function (DUF1541) GNK04_06440 PF05437 Branched-chain amino acid transport protein (AzlD) GNK04_06445 PF01225 Mur ligase family, catalytic domain GNK04_06445 PF02875 Mur ligase family, glutamate ligase domain GNK04_06445 PF08245 Mur ligase middle domain GNK04_06460 PF10415 Fumarase C C-terminus GNK04_06460 PF00206 Lyase GNK04_06465 PF13416 Bacterial extracellular solute-binding protein GNK04_06470 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_06475 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_06480 PF00356 Bacterial regulatory proteins, lacI family GNK04_06485 PF00232 Glycosyl hydrolase family 1 GNK04_06495 PF00571 CBS domain GNK04_06495 PF00005 ABC transporter GNK04_06500 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_06515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNK04_06515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNK04_06515 PF02378 Phosphotransferase system, EIIC GNK04_06520 PF01074 Glycosyl hydrolases family 38 N-terminal domain GNK04_06520 PF09261 Alpha mannosidase middle domain GNK04_06520 PF07748 Glycosyl hydrolases family 38 C-terminal domain GNK04_06525 PF00128 Alpha amylase, catalytic domain GNK04_06530 PF02595 Glycerate kinase family GNK04_06600 PF04542 Sigma-70 region 2 GNK04_06600 PF08281 Sigma-70, region 4 GNK04_06615 PF13396 Phospholipase_D-nuclease N-terminal GNK04_06620 PF00005 ABC transporter GNK04_06620 PF13732 Domain of unknown function (DUF4162) GNK04_06625 PF12679 ABC-2 family transporter protein GNK04_06640 PF00293 NUDIX domain GNK04_06650 PF00271 Helicase conserved C-terminal domain GNK04_06650 PF04851 Type III restriction enzyme, res subunit GNK04_06655 PF02954 Bacterial regulatory protein, Fis family GNK04_06655 PF00158 Sigma-54 interaction domain GNK04_06655 PF13426 PAS domain GNK04_06660 PF00474 Sodium:solute symporter family GNK04_06675 PF08378 Nuclease-related domain GNK04_06680 PF00356 Bacterial regulatory proteins, lacI family GNK04_06685 PF01547 Bacterial extracellular solute-binding protein GNK04_06690 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_06695 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_06700 PF16657 Maltogenic Amylase, C-terminal domain GNK04_06700 PF00128 Alpha amylase, catalytic domain GNK04_06705 PF01979 Amidohydrolase family GNK04_06710 PF03841 L-seryl-tRNA selenium transferase GNK04_06715 PF07071 KDGP aldolase GNK04_06725 PF02447 GntP family permease GNK04_06735 PF03992 Antibiotic biosynthesis monooxygenase GNK04_06760 PF01022 Bacterial regulatory protein, arsR family GNK04_06765 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GNK04_06770 PF06968 Biotin and Thiamin Synthesis associated domain GNK04_06770 PF04055 Radical SAM superfamily GNK04_06790 PF00202 Aminotransferase class-III GNK04_06795 PF00155 Aminotransferase class I and II GNK04_06810 PF01613 Flavin reductase like domain GNK04_06815 PF00232 Glycosyl hydrolase family 1 GNK04_06820 PF01418 Helix-turn-helix domain, rpiR family GNK04_06820 PF01380 SIS domain GNK04_06865 PF04740 LXG domain of WXG superfamily GNK04_06880 PF13538 UvrD-like helicase C-terminal domain GNK04_06885 PF02540 NAD synthase GNK04_06890 PF00731 AIR carboxylase GNK04_06895 PF01969 Protein of unknown function DUF111 GNK04_06900 PF01969 Protein of unknown function DUF111 GNK04_06905 PF00989 PAS fold GNK04_06905 PF02954 Bacterial regulatory protein, Fis family GNK04_06905 PF00158 Sigma-54 interaction domain GNK04_06910 PF17042 Nucleotide-binding C-terminal domain GNK04_06910 PF07005 Sugar-binding N-terminal domain GNK04_06915 PF03480 Bacterial extracellular solute-binding protein, family 7 GNK04_06920 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GNK04_06925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNK04_06930 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GNK04_06940 PF13386 Cytochrome C biogenesis protein transmembrane region GNK04_06945 PF05651 Putative sugar diacid recognition GNK04_06945 PF17853 GGDEF-like domain GNK04_06945 PF13556 PucR C-terminal helix-turn-helix domain GNK04_06950 PF02595 Glycerate kinase family GNK04_06955 PF03812 2-keto-3-deoxygluconate permease GNK04_06960 PF09861 Lactate racemase N-terminal domain GNK04_06965 PF00392 Bacterial regulatory proteins, gntR family GNK04_06965 PF07702 UTRA domain GNK04_06970 PF09819 ABC-type cobalt transport system, permease component GNK04_06975 PF00005 ABC transporter GNK04_06985 PF04029 2-phosphosulpholactate phosphatase GNK04_06990 PF01048 Phosphorylase superfamily GNK04_06995 PF00171 Aldehyde dehydrogenase family GNK04_07005 PF00920 Dehydratase family GNK04_07015 PF01048 Phosphorylase superfamily GNK04_07020 PF01048 Phosphorylase superfamily GNK04_07030 PF00596 Class II Aldolase and Adducin N-terminal domain GNK04_07035 PF01008 Initiation factor 2 subunit family GNK04_07050 PF00175 Oxidoreductase NAD-binding domain GNK04_07050 PF00042 Globin GNK04_07050 PF00970 Oxidoreductase FAD-binding domain GNK04_07075 PF05067 Manganese containing catalase GNK04_07080 PF01810 LysE type translocator GNK04_07090 PF07690 Major Facilitator Superfamily GNK04_07100 PF00324 Amino acid permease GNK04_07120 PF01209 ubiE/COQ5 methyltransferase family GNK04_07125 PF01740 STAS domain GNK04_07125 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GNK04_07150 PF00583 Acetyltransferase (GNAT) family GNK04_07175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNK04_07175 PF00384 Molybdopterin oxidoreductase GNK04_07175 PF01568 Molydopterin dinucleotide binding domain GNK04_07205 PF07690 Major Facilitator Superfamily GNK04_07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_07210 PF07730 Histidine kinase GNK04_07215 PF00196 Bacterial regulatory proteins, luxR family GNK04_07215 PF00072 Response regulator receiver domain GNK04_07225 PF07730 Histidine kinase GNK04_07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_07230 PF00027 Cyclic nucleotide-binding domain GNK04_07230 PF00325 Bacterial regulatory proteins, crp family GNK04_07235 PF04405 Domain of Unknown function (DUF542) GNK04_07235 PF01814 Hemerythrin HHE cation binding domain GNK04_07270 PF04542 Sigma-70 region 2 GNK04_07270 PF08281 Sigma-70, region 4 GNK04_07280 PF00005 ABC transporter GNK04_07285 PF02687 FtsX-like permease family GNK04_07290 PF00672 HAMP domain GNK04_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_07290 PF00512 His Kinase A (phospho-acceptor) domain GNK04_07295 PF00486 Transcriptional regulatory protein, C terminal GNK04_07295 PF00072 Response regulator receiver domain GNK04_07300 PF00005 ABC transporter GNK04_07325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNK04_07325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNK04_07325 PF04324 BFD-like [2Fe-2S] binding domain GNK04_07325 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_07325 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNK04_07330 PF00384 Molybdopterin oxidoreductase GNK04_07330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNK04_07330 PF01568 Molydopterin dinucleotide binding domain GNK04_07335 PF07690 Major Facilitator Superfamily GNK04_07340 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNK04_07340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNK04_07340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNK04_07340 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_07340 PF04324 BFD-like [2Fe-2S] binding domain GNK04_07345 PF00355 Rieske [2Fe-2S] domain GNK04_07350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNK04_07360 PF04239 Protein of unknown function (DUF421) GNK04_07385 PF00005 ABC transporter GNK04_07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_07395 PF00486 Transcriptional regulatory protein, C terminal GNK04_07395 PF00072 Response regulator receiver domain GNK04_07410 PF00392 Bacterial regulatory proteins, gntR family GNK04_07410 PF07840 FadR C-terminal domain GNK04_07505 PF13188 PAS domain GNK04_07505 PF13426 PAS domain GNK04_07505 PF00512 His Kinase A (phospho-acceptor) domain GNK04_07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_07505 PF00989 PAS fold GNK04_07520 PF02447 GntP family permease GNK04_07525 PF01545 Cation efflux family GNK04_07525 PF16916 Dimerisation domain of Zinc Transporter GNK04_07540 PF00583 Acetyltransferase (GNAT) family GNK04_07545 PF07070 SpoOM protein GNK04_07570 PF00293 NUDIX domain GNK04_07585 PF03706 Lysylphosphatidylglycerol synthase TM region GNK04_07585 PF09924 Uncharacterised conserved protein (DUF2156) GNK04_07590 PF00873 AcrB/AcrD/AcrF family GNK04_07595 PF17934 Tetracyclin repressor-like, C-terminal domain GNK04_07595 PF00440 Bacterial regulatory proteins, tetR family GNK04_07610 PF00801 PKD domain GNK04_07610 PF05547 Immune inhibitor A peptidase M6 GNK04_07625 PF00440 Bacterial regulatory proteins, tetR family GNK04_07630 PF07690 Major Facilitator Superfamily GNK04_07635 PF05504 Spore germination B3/ GerAC like, C-terminal GNK04_07640 PF03845 Spore germination protein GNK04_07645 PF03323 Bacillus/Clostridium GerA spore germination protein GNK04_07650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNK04_07650 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNK04_07650 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_07650 PF04324 BFD-like [2Fe-2S] binding domain GNK04_07650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNK04_07660 PF02602 Uroporphyrinogen-III synthase HemD GNK04_07665 PF11588 Protein of unknown function (DUF3243) GNK04_07705 PF13614 AAA domain GNK04_07710 PF00437 Type II/IV secretion system protein GNK04_07730 PF00005 ABC transporter GNK04_07745 PF00175 Oxidoreductase NAD-binding domain GNK04_07745 PF00667 FAD binding domain GNK04_07745 PF00258 Flavodoxin GNK04_07750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNK04_07750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNK04_07755 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_07785 PF00989 PAS fold GNK04_07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_07785 PF00512 His Kinase A (phospho-acceptor) domain GNK04_07790 PF00158 Sigma-54 interaction domain GNK04_07790 PF02954 Bacterial regulatory protein, Fis family GNK04_07790 PF00072 Response regulator receiver domain GNK04_07800 PF00206 Lyase GNK04_07800 PF10415 Fumarase C C-terminus GNK04_07805 PF00171 Aldehyde dehydrogenase family GNK04_07810 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_07810 PF00107 Zinc-binding dehydrogenase GNK04_07815 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_07825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNK04_07825 PF02272 DHHA1 domain GNK04_07825 PF01411 tRNA synthetases class II (A) GNK04_07830 PF03551 Transcriptional regulator PadR-like family GNK04_07840 PF13536 Putative multidrug resistance efflux transporter GNK04_07850 PF01740 STAS domain GNK04_07850 PF00916 Sulfate permease family GNK04_07860 PF00083 Sugar (and other) transporter GNK04_07865 PF00440 Bacterial regulatory proteins, tetR family GNK04_07865 PF16925 Tetracyclin repressor-like, C-terminal domain GNK04_07870 PF07690 Major Facilitator Superfamily GNK04_07875 PF01717 Cobalamin-independent synthase, Catalytic domain GNK04_07875 PF08267 Cobalamin-independent synthase, N-terminal domain GNK04_07880 PF13411 MerR HTH family regulatory protein GNK04_07880 PF07739 TipAS antibiotic-recognition domain GNK04_07890 PF14602 Hexapeptide repeat of succinyl-transferase GNK04_07890 PF12464 Maltose acetyltransferase GNK04_07895 PF00356 Bacterial regulatory proteins, lacI family GNK04_07905 PF13416 Bacterial extracellular solute-binding protein GNK04_07910 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_07915 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_07920 PF08447 PAS fold GNK04_07920 PF00989 PAS fold GNK04_07920 PF00512 His Kinase A (phospho-acceptor) domain GNK04_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_07935 PF05163 DinB family GNK04_07940 PF00578 AhpC/TSA family GNK04_07945 PF00578 AhpC/TSA family GNK04_07950 PF01209 ubiE/COQ5 methyltransferase family GNK04_07955 PF00733 Asparagine synthase GNK04_07955 PF13537 Glutamine amidotransferase domain GNK04_07995 PF11132 Transcriptional regulator protein (SplA) GNK04_08005 PF05145 Transition state regulatory protein AbrB GNK04_08030 PF00375 Sodium:dicarboxylate symporter family GNK04_08050 PF02629 CoA binding domain GNK04_08050 PF06971 Putative DNA-binding protein N-terminus GNK04_08055 PF00578 AhpC/TSA family GNK04_08055 PF10417 C-terminal domain of 1-Cys peroxiredoxin GNK04_08075 PF02110 Hydroxyethylthiazole kinase family GNK04_08085 PF03109 ABC1 family GNK04_08090 PF00384 Molybdopterin oxidoreductase GNK04_08090 PF01568 Molydopterin dinucleotide binding domain GNK04_08095 PF10057 Uncharacterized conserved protein (DUF2294) GNK04_08100 PF07690 Major Facilitator Superfamily GNK04_08105 PF00781 Diacylglycerol kinase catalytic domain GNK04_08110 PF01156 Inosine-uridine preferring nucleoside hydrolase GNK04_08120 PF01594 AI-2E family transporter GNK04_08125 PF01476 LysM domain GNK04_08125 PF06725 3D domain GNK04_08145 PF00248 Aldo/keto reductase family GNK04_08155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNK04_08160 PF00367 phosphotransferase system, EIIB GNK04_08160 PF02378 Phosphotransferase system, EIIC GNK04_08165 PF00128 Alpha amylase, catalytic domain GNK04_08165 PF16657 Maltogenic Amylase, C-terminal domain GNK04_08170 PF07702 UTRA domain GNK04_08170 PF00392 Bacterial regulatory proteins, gntR family GNK04_08180 PF03060 Nitronate monooxygenase GNK04_08185 PF08659 KR domain GNK04_08185 PF14765 Polyketide synthase dehydratase GNK04_08185 PF00550 Phosphopantetheine attachment site GNK04_08185 PF00698 Acyl transferase domain GNK04_08185 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_08185 PF16197 Ketoacyl-synthetase C-terminal extension GNK04_08185 PF02801 Beta-ketoacyl synthase, C-terminal domain GNK04_08185 PF00109 Beta-ketoacyl synthase, N-terminal domain GNK04_08190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNK04_08200 PF01810 LysE type translocator GNK04_08205 PF04434 SWIM zinc finger GNK04_08205 PF00271 Helicase conserved C-terminal domain GNK04_08205 PF00176 SNF2 family N-terminal domain GNK04_08215 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_08220 PF01740 STAS domain GNK04_08220 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GNK04_08225 PF02146 Sir2 family GNK04_08230 PF00583 Acetyltransferase (GNAT) family GNK04_08235 PF03641 Possible lysine decarboxylase GNK04_08240 PF13193 AMP-binding enzyme C-terminal domain GNK04_08240 PF00501 AMP-binding enzyme GNK04_08260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNK04_08265 PF00005 ABC transporter GNK04_08270 PF12704 MacB-like periplasmic core domain GNK04_08270 PF02687 FtsX-like permease family GNK04_08275 PF09382 RQC domain GNK04_08275 PF16124 RecQ zinc-binding GNK04_08275 PF00570 HRDC domain GNK04_08275 PF00271 Helicase conserved C-terminal domain GNK04_08275 PF00270 DEAD/DEAH box helicase GNK04_08280 PF04239 Protein of unknown function (DUF421) GNK04_08300 PF01197 Ribosomal protein L31 GNK04_08310 PF00440 Bacterial regulatory proteins, tetR family GNK04_08315 PF00873 AcrB/AcrD/AcrF family GNK04_08320 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GNK04_08320 PF01740 STAS domain GNK04_08330 PF13419 Haloacid dehalogenase-like hydrolase GNK04_08335 PF10502 Signal peptidase, peptidase S26 GNK04_08340 PF00188 Cysteine-rich secretory protein family GNK04_08350 PF01740 STAS domain GNK04_08355 PF05225 helix-turn-helix, Psq domain GNK04_08355 PF02810 SEC-C motif GNK04_08360 PF00989 PAS fold GNK04_08360 PF13188 PAS domain GNK04_08360 PF13426 PAS domain GNK04_08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_08360 PF00512 His Kinase A (phospho-acceptor) domain GNK04_08365 PF03816 Cell envelope-related transcriptional attenuator domain GNK04_08370 PF03631 Virulence factor BrkB GNK04_08375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_08375 PF00512 His Kinase A (phospho-acceptor) domain GNK04_08375 PF00989 PAS fold GNK04_08390 PF00860 Permease family GNK04_08395 PF00860 Permease family GNK04_08400 PF00582 Universal stress protein family GNK04_08410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNK04_08410 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GNK04_08420 PF04199 Putative cyclase GNK04_08425 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GNK04_08425 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GNK04_08435 PF04238 Protein of unknown function (DUF420) GNK04_08440 PF01048 Phosphorylase superfamily GNK04_08445 PF13460 NAD(P)H-binding GNK04_08450 PF07687 Peptidase dimerisation domain GNK04_08450 PF01546 Peptidase family M20/M25/M40 GNK04_08465 PF13188 PAS domain GNK04_08465 PF13426 PAS domain GNK04_08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_08465 PF00989 PAS fold GNK04_08465 PF00512 His Kinase A (phospho-acceptor) domain GNK04_08475 PF00582 Universal stress protein family GNK04_08480 PF01297 Zinc-uptake complex component A periplasmic GNK04_08485 PF00005 ABC transporter GNK04_08490 PF00950 ABC 3 transport family GNK04_08495 PF00950 ABC 3 transport family GNK04_08500 PF06724 Domain of Unknown Function (DUF1206) GNK04_08505 PF00085 Thioredoxin GNK04_08510 PF01435 Peptidase family M48 GNK04_08525 PF00463 Isocitrate lyase family GNK04_08535 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) GNK04_08550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNK04_08550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNK04_08555 PF00912 Transglycosylase GNK04_08555 PF00905 Penicillin binding protein transpeptidase domain GNK04_08560 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_08560 PF00107 Zinc-binding dehydrogenase GNK04_08565 PF10803 Spore germination GerPB GNK04_08570 PF10676 Spore germination protein gerPA/gerPF GNK04_08585 PF10737 Spore germination protein GerPC GNK04_08590 PF10676 Spore germination protein gerPA/gerPF GNK04_08615 PF04308 Ribonuclease H-like GNK04_08625 PF06463 Molybdenum Cofactor Synthesis C GNK04_08625 PF04055 Radical SAM superfamily GNK04_08630 PF02634 FdhD/NarQ family GNK04_08640 PF00884 Sulfatase GNK04_08650 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNK04_08655 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_08665 PF01966 HD domain GNK04_08685 PF13426 PAS domain GNK04_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_08685 PF00989 PAS fold GNK04_08685 PF00512 His Kinase A (phospho-acceptor) domain GNK04_08685 PF13188 PAS domain GNK04_08720 PF09335 SNARE associated Golgi protein GNK04_08725 PF05067 Manganese containing catalase GNK04_08730 PF12652 CotJB protein GNK04_08745 PF12705 PD-(D/E)XK nuclease superfamily GNK04_08745 PF13361 UvrD-like helicase C-terminal domain GNK04_08750 PF00580 UvrD/REP helicase N-terminal domain GNK04_08750 PF12705 PD-(D/E)XK nuclease superfamily GNK04_08750 PF13361 UvrD-like helicase C-terminal domain GNK04_08755 PF00149 Calcineurin-like phosphoesterase GNK04_08755 PF12320 Type 5 capsule protein repressor C-terminal domain GNK04_08760 PF13476 AAA domain GNK04_08775 PF01557 Fumarylacetoacetate (FAA) hydrolase family GNK04_08780 PF00171 Aldehyde dehydrogenase family GNK04_08785 PF00202 Aminotransferase class-III GNK04_08790 PF07457 Protein of unknown function (DUF1516) GNK04_08795 PF00990 Diguanylate cyclase, GGDEF domain GNK04_08795 PF03707 Bacterial signalling protein N terminal repeat GNK04_08795 PF00563 EAL domain GNK04_08800 PF01494 FAD binding domain GNK04_08810 PF13537 Glutamine amidotransferase domain GNK04_08810 PF00733 Asparagine synthase GNK04_08815 PF00909 Ammonium Transporter Family GNK04_08820 PF00543 Nitrogen regulatory protein P-II GNK04_08825 PF00128 Alpha amylase, catalytic domain GNK04_08825 PF02903 Alpha amylase, N-terminal ig-like domain GNK04_08825 PF16657 Maltogenic Amylase, C-terminal domain GNK04_08830 PF13416 Bacterial extracellular solute-binding protein GNK04_08835 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_08840 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_08845 PF00356 Bacterial regulatory proteins, lacI family GNK04_08850 PF01068 ATP dependent DNA ligase domain GNK04_08855 PF04679 ATP dependent DNA ligase C terminal region GNK04_08855 PF01068 ATP dependent DNA ligase domain GNK04_08855 PF13298 DNA polymerase Ligase (LigD) GNK04_08860 PF02735 Ku70/Ku80 beta-barrel domain GNK04_08870 PF00512 His Kinase A (phospho-acceptor) domain GNK04_08870 PF00989 PAS fold GNK04_08870 PF13188 PAS domain GNK04_08870 PF13426 PAS domain GNK04_08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_08875 PF03070 TENA/THI-4/PQQC family GNK04_08885 PF00005 ABC transporter GNK04_08900 PF02645 Uncharacterised protein, DegV family COG1307 GNK04_08905 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_08905 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_08950 PF00326 Prolyl oligopeptidase family GNK04_08955 PF01883 Iron-sulfur cluster assembly protein GNK04_08960 PF01476 LysM domain GNK04_08960 PF00704 Glycosyl hydrolases family 18 GNK04_08965 PF00994 Probable molybdopterin binding domain GNK04_08965 PF03454 MoeA C-terminal region (domain IV) GNK04_08965 PF03453 MoeA N-terminal region (domain I and II) GNK04_08970 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GNK04_08975 PF02391 MoaE protein GNK04_08985 PF00325 Bacterial regulatory proteins, crp family GNK04_08985 PF00027 Cyclic nucleotide-binding domain GNK04_08990 PF02673 Bacitracin resistance protein BacA GNK04_08995 PF14168 YjzC-like protein GNK04_09005 PF03073 TspO/MBR family GNK04_09015 PF01266 FAD dependent oxidoreductase GNK04_09035 PF10815 ComZ GNK04_09050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GNK04_09050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GNK04_09055 PF00109 Beta-ketoacyl synthase, N-terminal domain GNK04_09055 PF02801 Beta-ketoacyl synthase, C-terminal domain GNK04_09060 PF12227 Protein of unknown function (DUF3603) GNK04_09065 PF00579 tRNA synthetases class I (W and Y) GNK04_09075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNK04_09080 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_09085 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_09085 PF12911 N-terminal TM domain of oligopeptide transport permease C GNK04_09090 PF00005 ABC transporter GNK04_09090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNK04_09095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNK04_09095 PF00005 ABC transporter GNK04_09110 PF01966 HD domain GNK04_09125 PF13508 Acetyltransferase (GNAT) domain GNK04_09130 PF00873 AcrB/AcrD/AcrF family GNK04_09140 PF03960 ArsC family GNK04_09145 PF03741 Integral membrane protein TerC family GNK04_09160 PF08439 Oligopeptidase F GNK04_09160 PF01432 Peptidase family M3 GNK04_09175 PF01152 Bacterial-like globin GNK04_09180 PF01928 CYTH domain GNK04_09190 PF04607 Region found in RelA / SpoT proteins GNK04_09195 PF01513 ATP-NAD kinase GNK04_09200 PF00849 RNA pseudouridylate synthase GNK04_09205 PF00149 Calcineurin-like phosphoesterase GNK04_09210 PF01098 Cell cycle protein GNK04_09215 PF03448 MgtE intracellular N domain GNK04_09215 PF00571 CBS domain GNK04_09215 PF01769 Divalent cation transporter GNK04_09220 PF02080 TrkA-C domain GNK04_09220 PF02254 TrkA-N domain GNK04_09220 PF00999 Sodium/hydrogen exchanger family GNK04_09255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_09255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_09265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNK04_09270 PF01476 LysM domain GNK04_09300 PF04239 Protein of unknown function (DUF421) GNK04_09305 PF13673 Acetyltransferase (GNAT) domain GNK04_09315 PF00756 Putative esterase GNK04_09320 PF04608 Phosphatidylglycerophosphatase A GNK04_09330 PF13031 Protein of unknown function (DUF3892) GNK04_09340 PF04294 VanW like protein GNK04_09345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_09345 PF00512 His Kinase A (phospho-acceptor) domain GNK04_09345 PF00989 PAS fold GNK04_09345 PF13188 PAS domain GNK04_09345 PF13426 PAS domain GNK04_09365 PF01544 CorA-like Mg2+ transporter protein GNK04_09380 PF07690 Major Facilitator Superfamily GNK04_09390 PF01925 Sulfite exporter TauE/SafE GNK04_09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_09395 PF03466 LysR substrate binding domain GNK04_09400 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GNK04_09400 PF00132 Bacterial transferase hexapeptide (six repeats) GNK04_09400 PF14602 Hexapeptide repeat of succinyl-transferase GNK04_09405 PF07687 Peptidase dimerisation domain GNK04_09405 PF01546 Peptidase family M20/M25/M40 GNK04_09410 PF03698 Uncharacterised protein family (UPF0180) GNK04_09415 PF06150 ChaB GNK04_09420 PF00924 Mechanosensitive ion channel GNK04_09425 PF00578 AhpC/TSA family GNK04_09425 PF10417 C-terminal domain of 1-Cys peroxiredoxin GNK04_09430 PF00005 ABC transporter GNK04_09430 PF00664 ABC transporter transmembrane region GNK04_09435 PF00664 ABC transporter transmembrane region GNK04_09435 PF00005 ABC transporter GNK04_09440 PF01654 Cytochrome bd terminal oxidase subunit I GNK04_09445 PF02322 Cytochrome bd terminal oxidase subunit II GNK04_09450 PF02080 TrkA-C domain GNK04_09450 PF02254 TrkA-N domain GNK04_09455 PF17770 Ribonuclease J C-terminal domain GNK04_09455 PF00753 Metallo-beta-lactamase superfamily GNK04_09455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GNK04_09465 PF00892 EamA-like transporter family GNK04_09475 PF01327 Polypeptide deformylase GNK04_09480 PF10368 Putative cell-wall binding lipoprotein GNK04_09485 PF00676 Dehydrogenase E1 component GNK04_09490 PF02780 Transketolase, C-terminal domain GNK04_09490 PF02779 Transketolase, pyrimidine binding domain GNK04_09495 PF02817 e3 binding domain GNK04_09495 PF00364 Biotin-requiring enzyme GNK04_09495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNK04_09500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNK04_09500 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_09505 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_09525 PF01276 Orn/Lys/Arg decarboxylase, major domain GNK04_09525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GNK04_09530 PF03060 Nitronate monooxygenase GNK04_09535 PF05256 Uncharacterised protein family (UPF0223) GNK04_09540 PF06335 Protein of unknown function (DUF1054) GNK04_09550 PF00459 Inositol monophosphatase family GNK04_09555 PF00583 Acetyltransferase (GNAT) family GNK04_09565 PF14036 YlaH-like protein GNK04_09580 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GNK04_09590 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNK04_09595 PF02562 PhoH-like protein GNK04_09595 PF13638 PIN domain GNK04_09605 PF04960 Glutaminase GNK04_09610 PF07408 Protein of unknown function (DUF1507) GNK04_09620 PF01098 Cell cycle protein GNK04_09625 PF02436 Conserved carboxylase domain GNK04_09625 PF02785 Biotin carboxylase C-terminal domain GNK04_09625 PF00364 Biotin-requiring enzyme GNK04_09625 PF00289 Biotin carboxylase, N-terminal domain GNK04_09625 PF00682 HMGL-like GNK04_09625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNK04_09630 PF02628 Cytochrome oxidase assembly protein GNK04_09645 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNK04_09650 PF00510 Cytochrome c oxidase subunit III GNK04_09655 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GNK04_09670 PF00188 Cysteine-rich secretory protein family GNK04_09675 PF08868 YugN-like family GNK04_09680 PF00188 Cysteine-rich secretory protein family GNK04_09680 PF14504 CAP-associated N-terminal GNK04_09690 PF14071 Putative coat protein GNK04_09695 PF14003 YlbE-like protein GNK04_09710 PF06133 Control of competence regulator ComK, YlbF/YmcA GNK04_09720 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GNK04_09725 PF07690 Major Facilitator Superfamily GNK04_09725 PF00083 Sugar (and other) transporter GNK04_09745 PF01467 Cytidylyltransferase-like GNK04_09750 PF07670 Nucleoside recognition GNK04_09755 PF01734 Patatin-like phospholipase GNK04_09760 PF05362 Lon protease (S16) C-terminal proteolytic domain GNK04_09760 PF13180 PDZ domain GNK04_09765 PF05636 HIGH Nucleotidyl Transferase GNK04_09770 PF02620 Large ribosomal RNA subunit accumulation protein YceD GNK04_09775 PF01783 Ribosomal L32p protein family GNK04_09780 PF00378 Enoyl-CoA hydratase/isomerase GNK04_09790 PF00583 Acetyltransferase (GNAT) family GNK04_09795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNK04_09795 PF00289 Biotin carboxylase, N-terminal domain GNK04_09795 PF02785 Biotin carboxylase C-terminal domain GNK04_09800 PF00364 Biotin-requiring enzyme GNK04_09805 PF01039 Carboxyl transferase domain GNK04_09810 PF02558 Ketopantoate reductase PanE/ApbA GNK04_09810 PF08546 Ketopantoate reductase PanE/ApbA C terminal GNK04_09820 PF10079 Bacillithiol biosynthesis BshC GNK04_09825 PF02381 MraZ protein, putative antitoxin-like GNK04_09830 PF01795 MraW methylase family GNK04_09845 PF00905 Penicillin binding protein transpeptidase domain GNK04_09845 PF03793 PASTA domain GNK04_09845 PF03717 Penicillin-binding Protein dimerisation domain GNK04_09850 PF08245 Mur ligase middle domain GNK04_09850 PF02875 Mur ligase family, glutamate ligase domain GNK04_09850 PF01225 Mur ligase family, catalytic domain GNK04_09855 PF01225 Mur ligase family, catalytic domain GNK04_09855 PF02875 Mur ligase family, glutamate ligase domain GNK04_09855 PF08245 Mur ligase middle domain GNK04_09860 PF00953 Glycosyl transferase family 4 GNK04_09865 PF08245 Mur ligase middle domain GNK04_09865 PF02875 Mur ligase family, glutamate ligase domain GNK04_09870 PF01098 Cell cycle protein GNK04_09875 PF08478 POTRA domain, FtsQ-type GNK04_09875 PF03799 Cell division protein FtsQ GNK04_09880 PF02491 SHS2 domain inserted in FTSA GNK04_09885 PF12327 FtsZ family, C-terminal domain GNK04_09885 PF00091 Tubulin/FtsZ family, GTPase domain GNK04_09890 PF00742 Homoserine dehydrogenase GNK04_09890 PF01842 ACT domain GNK04_09890 PF03447 Homoserine dehydrogenase, NAD binding domain GNK04_09895 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_09900 PF08544 GHMP kinases C terminal GNK04_09900 PF00288 GHMP kinases N terminal domain GNK04_09905 PF03419 Sporulation factor SpoIIGA GNK04_09910 PF04542 Sigma-70 region 2 GNK04_09910 PF04545 Sigma-70, region 4 GNK04_09915 PF04545 Sigma-70, region 4 GNK04_09915 PF04539 Sigma-70 region 3 GNK04_09915 PF04542 Sigma-70 region 2 GNK04_09920 PF05239 PRC-barrel domain GNK04_09930 PF01168 Alanine racemase, N-terminal domain GNK04_09935 PF04472 Cell division protein SepF GNK04_09945 PF17774 Putative RNA-binding domain in YlmH GNK04_09945 PF01479 S4 domain GNK04_09950 PF05103 DivIVA protein GNK04_09955 PF06827 Zinc finger found in FPG and IleRS GNK04_09955 PF08264 Anticodon-binding domain of tRNA GNK04_09955 PF00133 tRNA synthetases class I (I, L, M and V) GNK04_09960 PF01252 Signal peptidase (SPase) II GNK04_09965 PF01479 S4 domain GNK04_09965 PF00849 RNA pseudouridylate synthase GNK04_09970 PF00156 Phosphoribosyl transferase domain GNK04_09975 PF00860 Permease family GNK04_09980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNK04_09980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNK04_09985 PF01979 Amidohydrolase family GNK04_09990 PF00117 Glutamine amidotransferase class-I GNK04_09990 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GNK04_09995 PF02142 MGS-like domain GNK04_09995 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GNK04_09995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNK04_10005 PF01180 Dihydroorotate dehydrogenase GNK04_10010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GNK04_10020 PF01209 ubiE/COQ5 methyltransferase family GNK04_10030 PF00689 Cation transporting ATPase, C-terminus GNK04_10030 PF00690 Cation transporter/ATPase, N-terminus GNK04_10035 PF03755 YicC-like family, N-terminal region GNK04_10035 PF08340 Domain of unknown function (DUF1732) GNK04_10040 PF04025 Domain of unknown function (DUF370) GNK04_10045 PF00625 Guanylate kinase GNK04_10050 PF01192 RNA polymerase Rpb6 GNK04_10055 PF02441 Flavoprotein GNK04_10055 PF04127 DNA / pantothenate metabolism flavoprotein GNK04_10060 PF04851 Type III restriction enzyme, res subunit GNK04_10060 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GNK04_10060 PF18074 Primosomal protein N C-terminal domain GNK04_10060 PF17764 3′ DNA-binding domain (3′BD) GNK04_10060 PF00271 Helicase conserved C-terminal domain GNK04_10065 PF01327 Polypeptide deformylase GNK04_10070 PF00551 Formyl transferase GNK04_10070 PF02911 Formyl transferase, C-terminal domain GNK04_10075 PF01189 16S rRNA methyltransferase RsmB/F GNK04_10075 PF01029 NusB family GNK04_10085 PF00069 Protein kinase domain GNK04_10085 PF03793 PASTA domain GNK04_10090 PF03193 RsgA GTPase GNK04_10090 PF16745 RsgA N-terminal domain GNK04_10095 PF00834 Ribulose-phosphate 3 epimerase family GNK04_10100 PF09515 Thiamine transporter protein (Thia_YuaJ) GNK04_10105 PF04263 Thiamin pyrophosphokinase, catalytic domain GNK04_10105 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GNK04_10110 PF08183 Stage V sporulation protein family GNK04_10120 PF00830 Ribosomal L28 family GNK04_10125 PF03780 Asp23 family, cell envelope-related function GNK04_10130 PF02734 DAK2 domain GNK04_10130 PF13684 Dihydroxyacetone kinase family GNK04_10135 PF01842 ACT domain GNK04_10135 PF03315 Serine dehydratase beta chain GNK04_10140 PF03313 Serine dehydratase alpha chain GNK04_10145 PF00270 DEAD/DEAH box helicase GNK04_10145 PF00271 Helicase conserved C-terminal domain GNK04_10145 PF17191 RecG wedge domain GNK04_10150 PF03061 Thioesterase superfamily GNK04_10155 PF02504 Fatty acid synthesis protein GNK04_10160 PF00698 Acyl transferase domain GNK04_10170 PF00550 Phosphopantetheine attachment site GNK04_10175 PF14622 Ribonuclease-III-like GNK04_10175 PF00035 Double-stranded RNA binding motif GNK04_10180 PF06569 Protein of unknown function (DUF1128) GNK04_10185 PF06470 SMC proteins Flexible Hinge Domain GNK04_10185 PF02463 RecF/RecN/SMC N terminal domain GNK04_10190 PF02881 SRP54-type protein, helical bundle domain GNK04_10190 PF00448 SRP54-type protein, GTPase domain GNK04_10195 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GNK04_10200 PF02881 SRP54-type protein, helical bundle domain GNK04_10200 PF00448 SRP54-type protein, GTPase domain GNK04_10200 PF02978 Signal peptide binding domain GNK04_10205 PF00886 Ribosomal protein S16 GNK04_10220 PF01782 RimM N-terminal domain GNK04_10220 PF05239 PRC-barrel domain GNK04_10225 PF01746 tRNA (Guanine-1)-methyltransferase GNK04_10230 PF01245 Ribosomal protein L19 GNK04_10235 PF10502 Signal peptidase, peptidase S26 GNK04_10240 PF01926 50S ribosome-binding GTPase GNK04_10245 PF01351 Ribonuclease HII GNK04_10255 PF00549 CoA-ligase GNK04_10255 PF08442 ATP-grasp domain GNK04_10260 PF00549 CoA-ligase GNK04_10260 PF02629 CoA binding domain GNK04_10265 PF02481 DNA recombination-mediator protein A GNK04_10270 PF01396 Topoisomerase DNA binding C4 zinc finger GNK04_10270 PF01751 Toprim domain GNK04_10270 PF01131 DNA topoisomerase GNK04_10275 PF01134 Glucose inhibited division protein A GNK04_10280 PF00589 Phage integrase family GNK04_10280 PF02899 Phage integrase, N-terminal SAM-like domain GNK04_10285 PF00227 Proteasome subunit GNK04_10290 PF07724 AAA domain (Cdc48 subfamily) GNK04_10290 PF00004 ATPase family associated with various cellular activities (AAA) GNK04_10290 PF10431 C-terminal, D2-small domain, of ClpB protein GNK04_10295 PF08222 CodY helix-turn-helix domain GNK04_10295 PF06018 CodY GAF-like domain GNK04_10300 PF00318 Ribosomal protein S2 GNK04_10305 PF00889 Elongation factor TS GNK04_10310 PF00696 Amino acid kinase family GNK04_10315 PF01765 Ribosome recycling factor GNK04_10320 PF01255 Putative undecaprenyl diphosphate synthase GNK04_10330 PF13288 DXP reductoisomerase C-terminal domain GNK04_10330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GNK04_10330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GNK04_10335 PF17820 PDZ domain GNK04_10335 PF02163 Peptidase family M50 GNK04_10340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNK04_10340 PF04073 Aminoacyl-tRNA editing domain GNK04_10340 PF03129 Anticodon binding domain GNK04_10345 PF14480 DNA polymerase III polC-type N-terminus I GNK04_10345 PF11490 DNA polymerase III polC-type N-terminus II GNK04_10345 PF00929 Exonuclease GNK04_10345 PF02811 PHP domain GNK04_10345 PF14579 Helix-hairpin-helix motif GNK04_10345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNK04_10345 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNK04_10350 PF02576 RimP N-terminal domain GNK04_10350 PF17384 RimP C-terminal SH3 domain GNK04_10355 PF00575 S1 RNA binding domain GNK04_10355 PF13184 NusA-like KH domain GNK04_10355 PF08529 NusA N-terminal domain GNK04_10360 PF04296 Protein of unknown function (DUF448) GNK04_10365 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GNK04_10370 PF04760 Translation initiation factor IF-2, N-terminal region GNK04_10370 PF11987 Translation-initiation factor 2 GNK04_10370 PF00009 Elongation factor Tu GTP binding domain GNK04_10375 PF04456 Protein of unknown function (DUF503) GNK04_10380 PF02033 Ribosome-binding factor A GNK04_10385 PF16198 tRNA pseudouridylate synthase B C-terminal domain GNK04_10385 PF01509 TruB family pseudouridylate synthase (N terminal domain) GNK04_10390 PF06574 FAD synthetase GNK04_10390 PF01687 Riboflavin kinase GNK04_10395 PF00312 Ribosomal protein S15 GNK04_10400 PF00013 KH domain GNK04_10400 PF03725 3' exoribonuclease family, domain 2 GNK04_10400 PF00575 S1 RNA binding domain GNK04_10400 PF01138 3' exoribonuclease family, domain 1 GNK04_10400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GNK04_10405 PF01522 Polysaccharide deacetylase GNK04_10410 PF05193 Peptidase M16 inactive domain GNK04_10410 PF00675 Insulinase (Peptidase family M16) GNK04_10415 PF05239 PRC-barrel domain GNK04_10420 PF16924 Dipicolinate synthase subunit A N-terminal domain GNK04_10420 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNK04_10425 PF02441 Flavoprotein GNK04_10430 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNK04_10430 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNK04_10435 PF13840 ACT domain GNK04_10435 PF00696 Amino acid kinase family GNK04_10440 PF00701 Dihydrodipicolinate synthetase family GNK04_10445 PF00574 Clp protease GNK04_10455 PF17854 FtsK alpha domain GNK04_10455 PF09397 Ftsk gamma domain GNK04_10455 PF01580 FtsK/SpoIIIE family GNK04_10480 PF05193 Peptidase M16 inactive domain GNK04_10485 PF00675 Insulinase (Peptidase family M16) GNK04_10485 PF05193 Peptidase M16 inactive domain GNK04_10495 PF11588 Protein of unknown function (DUF3243) GNK04_10500 PF11868 Protein of unknown function (DUF3388) GNK04_10505 PF13464 Domain of unknown function (DUF4115) GNK04_10510 PF01066 CDP-alcohol phosphatidyltransferase GNK04_10515 PF18146 Damage-inducible protein CinA KH domain GNK04_10515 PF00994 Probable molybdopterin binding domain GNK04_10515 PF02464 Competence-damaged protein GNK04_10520 PF00270 DEAD/DEAH box helicase GNK04_10520 PF00271 Helicase conserved C-terminal domain GNK04_10525 PF00154 recA bacterial DNA recombination protein GNK04_10530 PF01966 HD domain GNK04_10530 PF00013 KH domain GNK04_10530 PF12072 Domain of unknown function (DUF3552) GNK04_10535 PF13277 YmdB-like protein GNK04_10540 PF04232 Stage V sporulation protein S (SpoVS) GNK04_10545 PF01244 Membrane dipeptidase (Peptidase family M19) GNK04_10550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GNK04_10550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GNK04_10550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GNK04_10555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNK04_10560 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_10560 PF00107 Zinc-binding dehydrogenase GNK04_10565 PF00155 Aminotransferase class I and II GNK04_10570 PF00919 Uncharacterized protein family UPF0004 GNK04_10570 PF04055 Radical SAM superfamily GNK04_10570 PF01938 TRAM domain GNK04_10575 PF06133 Control of competence regulator ComK, YlbF/YmcA GNK04_10590 PF10628 Outer spore coat protein E (CotE) GNK04_10595 PF05188 MutS domain II GNK04_10595 PF05192 MutS domain III GNK04_10595 PF05190 MutS family domain IV GNK04_10595 PF01624 MutS domain I GNK04_10595 PF00488 MutS domain V GNK04_10600 PF01119 DNA mismatch repair protein, C-terminal domain GNK04_10600 PF08676 MutL C terminal dimerisation domain GNK04_10610 PF17209 Hfq protein GNK04_10630 PF17866 AAA lid domain GNK04_10630 PF00004 ATPase family associated with various cellular activities (AAA) GNK04_10635 PF13167 GTP-binding GTPase N-terminal GNK04_10635 PF16360 GTP-binding GTPase Middle Region GNK04_10635 PF01926 50S ribosome-binding GTPase GNK04_10640 PF06838 Methionine gamma-lyase GNK04_10645 PF03951 Glutamine synthetase, beta-Grasp domain GNK04_10645 PF00120 Glutamine synthetase, catalytic domain GNK04_10650 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GNK04_10650 PF01740 STAS domain GNK04_10665 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_10665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNK04_10670 PF01476 LysM domain GNK04_10670 PF00877 NlpC/P60 family GNK04_10675 PF00293 NUDIX domain GNK04_10680 PF01872 RibD C-terminal domain GNK04_10690 PF00703 Glycosyl hydrolases family 2 GNK04_10690 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 GNK04_10690 PF16355 Domain of unknown function (DUF4982) GNK04_10690 PF02837 Glycosyl hydrolases family 2, sugar binding domain GNK04_10690 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GNK04_10710 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_10710 PF18158 Adaptive response protein AidB N-terminal domain GNK04_10710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_10715 PF00210 Ferritin-like domain GNK04_10720 PF00717 Peptidase S24-like GNK04_10720 PF01726 LexA DNA binding domain GNK04_10725 PF01476 LysM domain GNK04_10730 PF00239 Resolvase, N terminal domain GNK04_10735 PF05979 Bacterial protein of unknown function (DUF896) GNK04_10745 PF10747 Sporulation inhibitor of replication protein SirA GNK04_10750 PF03672 Uncharacterised protein family (UPF0154) GNK04_10755 PF02557 D-alanyl-D-alanine carboxypeptidase GNK04_10760 PF02683 Cytochrome C biogenesis protein transmembrane region GNK04_10765 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GNK04_10770 PF07301 Protein of unknown function (DUF1453) GNK04_10775 PF11084 Protein of unknown function (DUF2621) GNK04_10785 PF09107 Elongation factor SelB, winged helix GNK04_10785 PF09106 Elongation factor SelB, winged helix GNK04_10785 PF09105 Elongation factor SelB, winged helix GNK04_10785 PF00009 Elongation factor Tu GTP binding domain GNK04_10785 PF03144 Elongation factor Tu domain 2 GNK04_10795 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_10800 PF00005 ABC transporter GNK04_10815 PF12390 Selenocysteine synthase N terminal GNK04_10815 PF03841 L-seryl-tRNA selenium transferase GNK04_10820 PF08179 Small acid-soluble spore protein P family GNK04_10835 PF00330 Aconitase family (aconitate hydratase) GNK04_10835 PF00694 Aconitase C-terminal domain GNK04_10840 PF13040 Fur-regulated basic protein B GNK04_10845 PF08177 Small acid-soluble spore protein N family GNK04_10865 PF03061 Thioesterase superfamily GNK04_10875 PF01521 Iron-sulphur cluster biosynthesis GNK04_10880 PF13472 GDSL-like Lipase/Acylhydrolase family GNK04_10885 PF13472 GDSL-like Lipase/Acylhydrolase family GNK04_10915 PF01063 Amino-transferase class IV GNK04_10920 PF00271 Helicase conserved C-terminal domain GNK04_10920 PF00270 DEAD/DEAH box helicase GNK04_10925 PF00350 Dynamin family GNK04_10930 PF00581 Rhodanese-like domain GNK04_10935 PF00155 Aminotransferase class I and II GNK04_10940 PF13556 PucR C-terminal helix-turn-helix domain GNK04_10940 PF06018 CodY GAF-like domain GNK04_10940 PF17853 GGDEF-like domain GNK04_10945 PF00202 Aminotransferase class-III GNK04_10950 PF01144 Coenzyme A transferase GNK04_10955 PF01144 Coenzyme A transferase GNK04_10960 PF07687 Peptidase dimerisation domain GNK04_10960 PF01546 Peptidase family M20/M25/M40 GNK04_10965 PF00583 Acetyltransferase (GNAT) family GNK04_10970 PF00158 Sigma-54 interaction domain GNK04_10970 PF02954 Bacterial regulatory protein, Fis family GNK04_10970 PF13426 PAS domain GNK04_10975 PF12544 Lysine-2,3-aminomutase GNK04_10980 PF14122 YokU-like protein, putative antitoxin GNK04_10990 PF01367 5'-3' exonuclease, C-terminal SAM fold GNK04_10990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNK04_10995 PF13456 Reverse transcriptase-like GNK04_11005 PF13456 Reverse transcriptase-like GNK04_11015 PF00313 'Cold-shock' DNA-binding domain GNK04_11020 PF01268 Formate--tetrahydrofolate ligase GNK04_11025 PF03061 Thioesterase superfamily GNK04_11035 PF17783 CvfB-like winged helix domain GNK04_11035 PF13509 S1 domain GNK04_11040 PF14148 YhdB-like protein GNK04_11050 PF02806 Alpha amylase, C-terminal all-beta domain GNK04_11050 PF00128 Alpha amylase, catalytic domain GNK04_11050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNK04_11055 PF00132 Bacterial transferase hexapeptide (six repeats) GNK04_11055 PF00483 Nucleotidyl transferase GNK04_11060 PF00483 Nucleotidyl transferase GNK04_11065 PF00534 Glycosyl transferases group 1 GNK04_11065 PF08323 Starch synthase catalytic domain GNK04_11070 PF12792 CSS motif domain associated with EAL GNK04_11070 PF00563 EAL domain GNK04_11085 PF08712 Scaffold protein Nfu/NifU N terminal GNK04_11085 PF13769 Virulence factor GNK04_11090 PF06491 Disulphide isomerase GNK04_11120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_11120 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_11120 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GNK04_11125 PF07486 Cell Wall Hydrolase GNK04_11125 PF01471 Putative peptidoglycan binding domain GNK04_11130 PF08810 Kinase associated protein B GNK04_11195 PF14005 YpjP-like protein GNK04_11205 PF07293 Protein of unknown function (DUF1450) GNK04_11210 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_11215 PF00011 Hsp20/alpha crystallin family GNK04_11220 PF00303 Thymidylate synthase GNK04_11225 PF00186 Dihydrofolate reductase GNK04_11230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_11230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_11250 PF00005 ABC transporter GNK04_11250 PF16326 ABC transporter C-terminal domain GNK04_11250 PF12848 ABC transporter GNK04_11255 PF04951 D-aminopeptidase GNK04_11260 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_11265 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_11265 PF12911 N-terminal TM domain of oligopeptide transport permease C GNK04_11270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNK04_11275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNK04_11275 PF13378 Enolase C-terminal domain-like GNK04_11280 PF00877 NlpC/P60 family GNK04_11290 PF03734 L,D-transpeptidase catalytic domain GNK04_11290 PF01476 LysM domain GNK04_11300 PF01593 Flavin containing amine oxidoreductase GNK04_11325 PF00005 ABC transporter GNK04_11330 PF13302 Acetyltransferase (GNAT) domain GNK04_11335 PF11188 Protein of unknown function (DUF2975) GNK04_11340 PF13443 Cro/C1-type HTH DNA-binding domain GNK04_11345 PF05675 Protein of unknown function (DUF817) GNK04_11350 PF01230 HIT domain GNK04_11365 PF03575 Peptidase family S51 GNK04_11370 PF01593 Flavin containing amine oxidoreductase GNK04_11375 PF00535 Glycosyl transferase family 2 GNK04_11385 PF01593 Flavin containing amine oxidoreductase GNK04_11395 PF01070 FMN-dependent dehydrogenase GNK04_11400 PF03553 Na+/H+ antiporter family GNK04_11405 PF01625 Peptide methionine sulfoxide reductase GNK04_11415 PF00664 ABC transporter transmembrane region GNK04_11415 PF00005 ABC transporter GNK04_11420 PF00005 ABC transporter GNK04_11420 PF00664 ABC transporter transmembrane region GNK04_11445 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNK04_11445 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNK04_11450 PF01960 ArgJ family GNK04_11455 PF00696 Amino acid kinase family GNK04_11460 PF00202 Aminotransferase class-III GNK04_11465 PF00117 Glutamine amidotransferase class-I GNK04_11465 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GNK04_11470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNK04_11470 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GNK04_11470 PF02142 MGS-like domain GNK04_11475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNK04_11475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNK04_11480 PF00764 Arginosuccinate synthase GNK04_11485 PF00206 Lyase GNK04_11485 PF14698 Argininosuccinate lyase C-terminal GNK04_11495 PF01734 Patatin-like phospholipase GNK04_11500 PF00171 Aldehyde dehydrogenase family GNK04_11505 PF02073 Thermophilic metalloprotease (M29) GNK04_11525 PF13472 GDSL-like Lipase/Acylhydrolase family GNK04_11530 PF12867 DinB superfamily GNK04_11530 PF03781 Sulfatase-modifying factor enzyme 1 GNK04_11535 PF00085 Thioredoxin GNK04_11550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNK04_11550 PF03129 Anticodon binding domain GNK04_11560 PF07690 Major Facilitator Superfamily GNK04_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_11565 PF03466 LysR substrate binding domain GNK04_11570 PF01493 GXGXG motif GNK04_11570 PF01645 Conserved region in glutamate synthase GNK04_11570 PF00310 Glutamine amidotransferases class-II GNK04_11570 PF04898 Glutamate synthase central domain GNK04_11575 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_11575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GNK04_11580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_11585 PF01738 Dienelactone hydrolase family GNK04_11590 PF00375 Sodium:dicarboxylate symporter family GNK04_11595 PF04445 Putative SAM-dependent methyltransferase GNK04_11610 PF00092 von Willebrand factor type A domain GNK04_11615 PF07728 AAA domain (dynein-related subfamily) GNK04_11620 PF08830 Protein of unknown function (DUF1806) GNK04_11625 PF02585 GlcNAc-PI de-N-acetylase GNK04_11630 PF00005 ABC transporter GNK04_11630 PF12848 ABC transporter GNK04_11635 PF01554 MatE GNK04_11640 PF04134 Protein of unknown function, DUF393 GNK04_11645 PF01048 Phosphorylase superfamily GNK04_11655 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_11655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GNK04_11660 PF01180 Dihydroorotate dehydrogenase GNK04_11665 PF01979 Amidohydrolase family GNK04_11670 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GNK04_11690 PF00171 Aldehyde dehydrogenase family GNK04_11695 PF00202 Aminotransferase class-III GNK04_11700 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_11700 PF00107 Zinc-binding dehydrogenase GNK04_11705 PF02779 Transketolase, pyrimidine binding domain GNK04_11705 PF00676 Dehydrogenase E1 component GNK04_11705 PF16870 2-oxoglutarate dehydrogenase C-terminal GNK04_11710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNK04_11710 PF02817 e3 binding domain GNK04_11710 PF00364 Biotin-requiring enzyme GNK04_11720 PF04143 Sulphur transport GNK04_11725 PF02898 Nitric oxide synthase, oxygenase domain GNK04_11730 PF03992 Antibiotic biosynthesis monooxygenase GNK04_11735 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GNK04_11750 PF00248 Aldo/keto reductase family GNK04_11765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_11765 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GNK04_11765 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_11775 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GNK04_11785 PF03601 Conserved hypothetical protein 698 GNK04_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_11790 PF03466 LysR substrate binding domain GNK04_11800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_11805 PF07690 Major Facilitator Superfamily GNK04_11810 PF01070 FMN-dependent dehydrogenase GNK04_11815 PF02872 5'-nucleotidase, C-terminal domain GNK04_11830 PF00589 Phage integrase family GNK04_11835 PF03301 Tryptophan 2,3-dioxygenase GNK04_11840 PF13685 Iron-containing alcohol dehydrogenase GNK04_11850 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_11850 PF00585 C-terminal regulatory domain of Threonine dehydratase GNK04_11860 PF13307 Helicase C-terminal domain GNK04_11870 PF00300 Histidine phosphatase superfamily (branch 1) GNK04_11880 PF02386 Cation transport protein GNK04_11885 PF02080 TrkA-C domain GNK04_11885 PF02254 TrkA-N domain GNK04_11890 PF00311 Phosphoenolpyruvate carboxylase GNK04_11895 PF00188 Cysteine-rich secretory protein family GNK04_11900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_11900 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_11900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_11915 PF15975 Flotillin GNK04_11915 PF01145 SPFH domain / Band 7 family GNK04_11920 PF01565 FAD binding domain GNK04_11920 PF02913 FAD linked oxidases, C-terminal domain GNK04_11925 PF00989 PAS fold GNK04_11925 PF02954 Bacterial regulatory protein, Fis family GNK04_11925 PF00158 Sigma-54 interaction domain GNK04_11935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_11935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_11935 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_11950 PF13193 AMP-binding enzyme C-terminal domain GNK04_11950 PF00501 AMP-binding enzyme GNK04_11955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNK04_11955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNK04_11960 PF00378 Enoyl-CoA hydratase/isomerase GNK04_11970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNK04_11970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNK04_11975 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_11975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_11975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_11995 PF00202 Aminotransferase class-III GNK04_12000 PF00282 Pyridoxal-dependent decarboxylase conserved domain GNK04_12005 PF04183 IucA / IucC family GNK04_12005 PF06276 Ferric iron reductase FhuF-like transporter GNK04_12015 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GNK04_12020 PF04183 IucA / IucC family GNK04_12020 PF06276 Ferric iron reductase FhuF-like transporter GNK04_12030 PF07859 alpha/beta hydrolase fold GNK04_12035 PF00248 Aldo/keto reductase family GNK04_12050 PF03466 LysR substrate binding domain GNK04_12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_12055 PF01274 Malate synthase GNK04_12060 PF07729 FCD domain GNK04_12060 PF00392 Bacterial regulatory proteins, gntR family GNK04_12065 PF02913 FAD linked oxidases, C-terminal domain GNK04_12065 PF01565 FAD binding domain GNK04_12070 PF13183 4Fe-4S dicluster domain GNK04_12070 PF02754 Cysteine-rich domain GNK04_12075 PF01565 FAD binding domain GNK04_12075 PF02913 FAD linked oxidases, C-terminal domain GNK04_12080 PF01557 Fumarylacetoacetate (FAA) hydrolase family GNK04_12085 PF02652 L-lactate permease GNK04_12090 PF00860 Permease family GNK04_12095 PF00156 Phosphoribosyl transferase domain GNK04_12100 PF00296 Luciferase-like monooxygenase GNK04_12110 PF02652 L-lactate permease GNK04_12125 PF04055 Radical SAM superfamily GNK04_12145 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GNK04_12145 PF01565 FAD binding domain GNK04_12150 PF07563 Protein of unknown function (DUF1541) GNK04_12160 PF03860 Domain of Unknown Function (DUF326) GNK04_12165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_12165 PF00989 PAS fold GNK04_12165 PF00512 His Kinase A (phospho-acceptor) domain GNK04_12165 PF16736 Single Cache-like GNK04_12170 PF00486 Transcriptional regulatory protein, C terminal GNK04_12170 PF00072 Response regulator receiver domain GNK04_12185 PF00574 Clp protease GNK04_12190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_12205 PF01546 Peptidase family M20/M25/M40 GNK04_12205 PF07687 Peptidase dimerisation domain GNK04_12215 PF13378 Enolase C-terminal domain-like GNK04_12215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNK04_12235 PF00155 Aminotransferase class I and II GNK04_12245 PF09335 SNARE associated Golgi protein GNK04_12250 PF04307 LexA-binding, inner membrane-associated putative hydrolase GNK04_12255 PF00521 DNA gyrase/topoisomerase IV, subunit A GNK04_12255 PF03989 DNA gyrase C-terminal domain, beta-propeller GNK04_12260 PF01751 Toprim domain GNK04_12260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_12260 PF00986 DNA gyrase B subunit, carboxyl terminus GNK04_12260 PF00204 DNA gyrase B GNK04_12270 PF02632 BioY family GNK04_12290 PF00067 Cytochrome P450 GNK04_12295 PF02073 Thermophilic metalloprotease (M29) GNK04_12305 PF13380 CoA binding domain GNK04_12320 PF07690 Major Facilitator Superfamily GNK04_12325 PF00313 'Cold-shock' DNA-binding domain GNK04_12335 PF00583 Acetyltransferase (GNAT) family GNK04_12355 PF00107 Zinc-binding dehydrogenase GNK04_12355 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_12370 PF02126 Phosphotriesterase family GNK04_12375 PF00501 AMP-binding enzyme GNK04_12375 PF13193 AMP-binding enzyme C-terminal domain GNK04_12390 PF00005 ABC transporter GNK04_12395 PF12399 Branched-chain amino acid ATP-binding cassette transporter GNK04_12395 PF00005 ABC transporter GNK04_12400 PF02653 Branched-chain amino acid transport system / permease component GNK04_12400 PF11862 Domain of unknown function (DUF3382) GNK04_12405 PF02653 Branched-chain amino acid transport system / permease component GNK04_12410 PF00378 Enoyl-CoA hydratase/isomerase GNK04_12420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_12420 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_12420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_12425 PF04029 2-phosphosulpholactate phosphatase GNK04_12440 PF00378 Enoyl-CoA hydratase/isomerase GNK04_12445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNK04_12445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNK04_12450 PF00440 Bacterial regulatory proteins, tetR family GNK04_12450 PF17932 Tetracyclin repressor-like, C-terminal domain GNK04_12455 PF00501 AMP-binding enzyme GNK04_12455 PF13193 AMP-binding enzyme C-terminal domain GNK04_12475 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_12475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_12475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_12480 PF01039 Carboxyl transferase domain GNK04_12485 PF00501 AMP-binding enzyme GNK04_12485 PF13193 AMP-binding enzyme C-terminal domain GNK04_12495 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GNK04_12515 PF02926 THUMP domain GNK04_12515 PF01170 Putative RNA methylase family UPF0020 GNK04_12525 PF05103 DivIVA protein GNK04_12530 PF06908 YspA SLOG family GNK04_12550 PF13482 RNase_H superfamily GNK04_12555 PF00271 Helicase conserved C-terminal domain GNK04_12555 PF09369 Domain of unknown function (DUF1998) GNK04_12555 PF00270 DEAD/DEAH box helicase GNK04_12565 PF03190 Protein of unknown function, DUF255 GNK04_12580 PF00221 Aromatic amino acid lyase GNK04_12585 PF09021 HutP GNK04_12590 PF00491 Arginase family GNK04_12595 PF01979 Amidohydrolase family GNK04_12600 PF01175 Urocanase Rossmann-like domain GNK04_12600 PF17392 Urocanase C-terminal domain GNK04_12600 PF17391 Urocanase N-terminal domain GNK04_12605 PF00274 Fructose-bisphosphate aldolase class-I GNK04_12610 PF12833 Helix-turn-helix domain GNK04_12630 PF01804 Penicillin amidase GNK04_12635 PF01063 Amino-transferase class IV GNK04_12650 PF04542 Sigma-70 region 2 GNK04_12650 PF08281 Sigma-70, region 4 GNK04_12660 PF00005 ABC transporter GNK04_12665 PF00392 Bacterial regulatory proteins, gntR family GNK04_12675 PF07849 Protein of unknown function (DUF1641) GNK04_12680 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_12685 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_12685 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_12690 PF07995 Glucose / Sorbosone dehydrogenase GNK04_12700 PF07486 Cell Wall Hydrolase GNK04_12705 PF01209 ubiE/COQ5 methyltransferase family GNK04_12730 PF00583 Acetyltransferase (GNAT) family GNK04_12790 PF01965 DJ-1/PfpI family GNK04_12805 PF07690 Major Facilitator Superfamily GNK04_12820 PF01266 FAD dependent oxidoreductase GNK04_12830 PF03458 UPF0126 domain GNK04_12835 PF08245 Mur ligase middle domain GNK04_12835 PF02875 Mur ligase family, glutamate ligase domain GNK04_12835 PF01225 Mur ligase family, catalytic domain GNK04_12845 PF13037 Domain of unknown function (DUF3898) GNK04_12845 PF13039 Protein of unknown function (DUF3900) GNK04_12865 PF00239 Resolvase, N terminal domain GNK04_12865 PF02796 Helix-turn-helix domain of resolvase GNK04_12880 PF01695 IstB-like ATP binding protein GNK04_12885 PF00665 Integrase core domain GNK04_12910 PF00589 Phage integrase family GNK04_12910 PF14659 Phage integrase, N-terminal SAM-like domain GNK04_12920 PF00248 Aldo/keto reductase family GNK04_12930 PF00106 short chain dehydrogenase GNK04_12940 PF06874 Firmicute fructose-1,6-bisphosphatase GNK04_12945 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GNK04_12945 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GNK04_12985 PF00266 Aminotransferase class-V GNK04_13000 PF01235 Sodium:alanine symporter family GNK04_13010 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) GNK04_13015 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_13020 PF00768 D-alanyl-D-alanine carboxypeptidase GNK04_13020 PF07943 Penicillin-binding protein 5, C-terminal domain GNK04_13030 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNK04_13050 PF13411 MerR HTH family regulatory protein GNK04_13055 PF10720 Protein of unknown function (DUF2515) GNK04_13060 PF03838 Recombination protein U GNK04_13065 PF00912 Transglycosylase GNK04_13065 PF00905 Penicillin binding protein transpeptidase domain GNK04_13070 PF00730 HhH-GPD superfamily base excision DNA repair protein GNK04_13070 PF00633 Helix-hairpin-helix motif GNK04_13070 PF10576 Iron-sulfur binding domain of endonuclease III GNK04_13075 PF07261 Replication initiation and membrane attachment GNK04_13080 PF01336 OB-fold nucleic acid binding domain GNK04_13080 PF00152 tRNA synthetases class II (D, K and N) GNK04_13085 PF00155 Aminotransferase class I and II GNK04_13095 PF14084 Protein of unknown function (DUF4264) GNK04_13105 PF00929 Exonuclease GNK04_13105 PF04851 Type III restriction enzyme, res subunit GNK04_13105 PF13307 Helicase C-terminal domain GNK04_13110 PF02261 Aspartate decarboxylase GNK04_13115 PF02569 Pantoate-beta-alanine ligase GNK04_13120 PF02548 Ketopantoate hydroxymethyltransferase GNK04_13125 PF03099 Biotin/lipoate A/B protein ligase family GNK04_13125 PF02237 Biotin protein ligase C terminal domain GNK04_13125 PF08279 HTH domain GNK04_13130 PF12627 Probable RNA and SrmB- binding site of polymerase A GNK04_13130 PF13735 tRNA nucleotidyltransferase domain 2 putative GNK04_13130 PF01743 Poly A polymerase head domain GNK04_13135 PF13439 Glycosyltransferase Family 4 GNK04_13135 PF00534 Glycosyl transferases group 1 GNK04_13140 PF02585 GlcNAc-PI de-N-acetylase GNK04_13145 PF02142 MGS-like domain GNK04_13150 PF05173 Dihydrodipicolinate reductase, C-terminus GNK04_13150 PF01113 Dihydrodipicolinate reductase, N-terminus GNK04_13155 PF03819 MazG nucleotide pyrophosphohydrolase domain GNK04_13160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_13160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_13165 PF04298 Putative neutral zinc metallopeptidase GNK04_13170 PF09577 Sporulation protein YpjB (SpoYpjB) GNK04_13175 PF07187 Protein of unknown function (DUF1405) GNK04_13180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNK04_13180 PF00032 Cytochrome b(C-terminal)/b6/petD GNK04_13185 PF00033 Cytochrome b/b6/petB GNK04_13190 PF00355 Rieske [2Fe-2S] domain GNK04_13195 PF10673 Protein of unknown function (DUF2487) GNK04_13205 PF08858 IDEAL domain GNK04_13205 PF08864 UPF0302 domain GNK04_13215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNK04_13220 PF01842 ACT domain GNK04_13220 PF02153 Prephenate dehydrogenase GNK04_13225 PF00155 Aminotransferase class I and II GNK04_13230 PF00290 Tryptophan synthase alpha chain GNK04_13235 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_13240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GNK04_13245 PF00218 Indole-3-glycerol phosphate synthase GNK04_13250 PF00591 Glycosyl transferase family, a/b domain GNK04_13250 PF02885 Glycosyl transferase family, helical bundle domain GNK04_13255 PF04715 Anthranilate synthase component I, N terminal region GNK04_13255 PF00425 chorismate binding enzyme GNK04_13260 PF07736 Chorismate mutase type I GNK04_13265 PF01761 3-dehydroquinate synthase GNK04_13270 PF01264 Chorismate synthase GNK04_13275 PF01425 Amidase GNK04_13280 PF00334 Nucleoside diphosphate kinase GNK04_13285 PF00348 Polyprenyl synthetase GNK04_13290 PF01209 ubiE/COQ5 methyltransferase family GNK04_13295 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GNK04_13300 PF02081 Tryptophan RNA-binding attenuator protein GNK04_13305 PF01227 GTP cyclohydrolase I GNK04_13310 PF00216 Bacterial DNA-binding protein GNK04_13315 PF09547 Stage IV sporulation protein A (spore_IV_A) GNK04_13325 PF10966 Protein of unknown function (DUF2768) GNK04_13335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GNK04_13335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GNK04_13340 PF02660 Glycerol-3-phosphate acyltransferase GNK04_13345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GNK04_13345 PF01926 50S ribosome-binding GTPase GNK04_13355 PF14045 YIEGIA protein GNK04_13365 PF14140 YpzI-like protein GNK04_13370 PF00575 S1 RNA binding domain GNK04_13375 PF01553 Acyltransferase GNK04_13380 PF02224 Cytidylate kinase GNK04_13385 PF14620 YpeB sporulation GNK04_13390 PF07486 Cell Wall Hydrolase GNK04_13390 PF01471 Putative peptidoglycan binding domain GNK04_13395 PF13367 PrsW family intramembrane metalloprotease GNK04_13400 PF17763 Glutaminase/Asparaginase C-terminal domain GNK04_13400 PF00710 Asparaginase, N-terminal GNK04_13410 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNK04_13410 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNK04_13415 PF01820 D-ala D-ala ligase N-terminus GNK04_13415 PF07478 D-ala D-ala ligase C-terminus GNK04_13420 PF02585 GlcNAc-PI de-N-acetylase GNK04_13425 PF05389 Negative regulator of genetic competence (MecA) GNK04_13430 PF02607 B12 binding domain GNK04_13430 PF02310 B12 binding domain GNK04_13430 PF13411 MerR HTH family regulatory protein GNK04_13435 PF00149 Calcineurin-like phosphoesterase GNK04_13445 PF00478 IMP dehydrogenase / GMP reductase domain GNK04_13445 PF00571 CBS domain GNK04_13465 PF00270 DEAD/DEAH box helicase GNK04_13465 PF00271 Helicase conserved C-terminal domain GNK04_13470 PF14493 Helix-turn-helix domain GNK04_13480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNK04_13480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNK04_13480 PF01842 ACT domain GNK04_13485 PF02811 PHP domain GNK04_13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_13490 PF18698 Histidine kinase sensor domain GNK04_13490 PF00512 His Kinase A (phospho-acceptor) domain GNK04_13490 PF00989 PAS fold GNK04_13490 PF00672 HAMP domain GNK04_13495 PF00072 Response regulator receiver domain GNK04_13495 PF00486 Transcriptional regulatory protein, C terminal GNK04_13500 PF01578 Cytochrome C assembly protein GNK04_13505 PF05140 ResB-like family GNK04_13510 PF00578 AhpC/TSA family GNK04_13515 PF00849 RNA pseudouridylate synthase GNK04_13515 PF01479 S4 domain GNK04_13520 PF07670 Nucleoside recognition GNK04_13525 PF07670 Nucleoside recognition GNK04_13530 PF07943 Penicillin-binding protein 5, C-terminal domain GNK04_13530 PF00768 D-alanyl-D-alanine carboxypeptidase GNK04_13535 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GNK04_13540 PF02797 Chalcone and stilbene synthases, C-terminal domain GNK04_13540 PF00195 Chalcone and stilbene synthases, N-terminal domain GNK04_13550 PF04079 Segregation and condensation complex subunit ScpB GNK04_13555 PF02616 Segregation and condensation protein ScpA GNK04_13560 PF03745 Domain of unknown function (DUF309) GNK04_13565 PF00583 Acetyltransferase (GNAT) family GNK04_13570 PF00885 6,7-dimethyl-8-ribityllumazine synthase GNK04_13575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GNK04_13575 PF00925 GTP cyclohydrolase II GNK04_13580 PF00677 Lumazine binding domain GNK04_13585 PF01872 RibD C-terminal domain GNK04_13585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNK04_13590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GNK04_13595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GNK04_13595 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GNK04_13600 PF03323 Bacillus/Clostridium GerA spore germination protein GNK04_13605 PF14097 Stage V sporulation protein AE1 GNK04_13610 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNK04_13615 PF07451 Stage V sporulation protein AD (SpoVAD) GNK04_13620 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNK04_13625 PF13782 Stage V sporulation protein AB GNK04_13630 PF12164 Stage V sporulation protein AA GNK04_13635 PF04542 Sigma-70 region 2 GNK04_13635 PF04539 Sigma-70 region 3 GNK04_13635 PF04545 Sigma-70, region 4 GNK04_13640 PF13581 Histidine kinase-like ATPase domain GNK04_13645 PF01740 STAS domain GNK04_13650 PF07943 Penicillin-binding protein 5, C-terminal domain GNK04_13650 PF00768 D-alanyl-D-alanine carboxypeptidase GNK04_13655 PF02885 Glycosyl transferase family, helical bundle domain GNK04_13655 PF00591 Glycosyl transferase family, a/b domain GNK04_13655 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GNK04_13660 PF01048 Phosphorylase superfamily GNK04_13665 PF01676 Metalloenzyme superfamily GNK04_13670 PF02899 Phage integrase, N-terminal SAM-like domain GNK04_13670 PF00589 Phage integrase family GNK04_13675 PF14004 Protein of unknown function (DUF4227) GNK04_13680 PF01475 Ferric uptake regulator family GNK04_13685 PF01944 Stage II sporulation protein M GNK04_13695 PF00293 NUDIX domain GNK04_13710 PF00248 Aldo/keto reductase family GNK04_13715 PF01144 Coenzyme A transferase GNK04_13720 PF01144 Coenzyme A transferase GNK04_13725 PF00108 Thiolase, N-terminal domain GNK04_13725 PF02803 Thiolase, C-terminal domain GNK04_13730 PF00682 HMGL-like GNK04_13750 PF05922 Peptidase inhibitor I9 GNK04_13750 PF00082 Subtilase family GNK04_13760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNK04_13760 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_13760 PF00403 Heavy-metal-associated domain GNK04_13770 PF09335 SNARE associated Golgi protein GNK04_13775 PF00005 ABC transporter GNK04_13775 PF08402 TOBE domain GNK04_13780 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_13790 PF13416 Bacterial extracellular solute-binding protein GNK04_13800 PF00174 Oxidoreductase molybdopterin binding domain GNK04_13820 PF01810 LysE type translocator GNK04_13835 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNK04_13840 PF00510 Cytochrome c oxidase subunit III GNK04_13845 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GNK04_13860 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_13870 PF04542 Sigma-70 region 2 GNK04_13870 PF08281 Sigma-70, region 4 GNK04_13875 PF00381 PTS HPr component phosphorylation site GNK04_13895 PF02833 DHHA2 domain GNK04_13895 PF01368 DHH family GNK04_13900 PF13460 NAD(P)H-binding GNK04_13905 PF07690 Major Facilitator Superfamily GNK04_13910 PF11495 Archaeal transcriptional regulator TrmB GNK04_13910 PF01978 Sugar-specific transcriptional regulator TrmB GNK04_13915 PF18277 AbrB C-terminal domain GNK04_13915 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNK04_13920 PF01047 MarR family GNK04_13925 PF03176 MMPL family GNK04_13945 PF13539 D-alanyl-D-alanine carboxypeptidase GNK04_13990 PF07690 Major Facilitator Superfamily GNK04_13995 PF00939 Sodium:sulfate symporter transmembrane region GNK04_14010 PF08386 TAP-like protein GNK04_14010 PF00561 alpha/beta hydrolase fold GNK04_14015 PF08863 YolD-like protein GNK04_14020 PF00817 impB/mucB/samB family GNK04_14020 PF11799 impB/mucB/samB family C-terminal domain GNK04_14020 PF11798 IMS family HHH motif GNK04_14025 PF07504 Fungalysin/Thermolysin Propeptide Motif GNK04_14025 PF03413 Peptidase propeptide and YPEB domain GNK04_14025 PF01447 Thermolysin metallopeptidase, catalytic domain GNK04_14025 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNK04_14030 PF00106 short chain dehydrogenase GNK04_14035 PF13302 Acetyltransferase (GNAT) domain GNK04_14040 PF05656 Protein of unknown function (DUF805) GNK04_14055 PF14158 YndJ-like protein GNK04_14060 PF13761 Domain of unknown function (DUF4166) GNK04_14070 PF00106 short chain dehydrogenase GNK04_14075 PF00753 Metallo-beta-lactamase superfamily GNK04_14080 PF03807 NADP oxidoreductase coenzyme F420-dependent GNK04_14080 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNK04_14090 PF13411 MerR HTH family regulatory protein GNK04_14105 PF02028 BCCT, betaine/carnitine/choline family transporter GNK04_14110 PF00209 Sodium:neurotransmitter symporter family GNK04_14115 PF03717 Penicillin-binding Protein dimerisation domain GNK04_14115 PF00905 Penicillin binding protein transpeptidase domain GNK04_14120 PF13091 PLD-like domain GNK04_14120 PF13396 Phospholipase_D-nuclease N-terminal GNK04_14125 PF02525 Flavodoxin-like fold GNK04_14140 PF01546 Peptidase family M20/M25/M40 GNK04_14145 PF03009 Glycerophosphoryl diester phosphodiesterase family GNK04_14150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNK04_14155 PF00753 Metallo-beta-lactamase superfamily GNK04_14155 PF12706 Beta-lactamase superfamily domain GNK04_14175 PF17863 AAA lid domain GNK04_14175 PF07726 ATPase family associated with various cellular activities (AAA) GNK04_14180 PF00817 impB/mucB/samB family GNK04_14180 PF11799 impB/mucB/samB family C-terminal domain GNK04_14185 PF01047 MarR family GNK04_14190 PF07687 Peptidase dimerisation domain GNK04_14190 PF01546 Peptidase family M20/M25/M40 GNK04_14195 PF01039 Carboxyl transferase domain GNK04_14205 PF01642 Methylmalonyl-CoA mutase GNK04_14205 PF02310 B12 binding domain GNK04_14215 PF03734 L,D-transpeptidase catalytic domain GNK04_14220 PF11728 Putative aromatic acid exporter C-terminal domain GNK04_14220 PF06081 Aromatic acid exporter family member 1 GNK04_14225 PF00005 ABC transporter GNK04_14230 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_14235 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNK04_14240 PF06491 Disulphide isomerase GNK04_14245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNK04_14245 PF00364 Biotin-requiring enzyme GNK04_14245 PF02817 e3 binding domain GNK04_14250 PF02780 Transketolase, C-terminal domain GNK04_14250 PF02779 Transketolase, pyrimidine binding domain GNK04_14255 PF00676 Dehydrogenase E1 component GNK04_14260 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_14260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNK04_14265 PF00871 Acetokinase family GNK04_14270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNK04_14270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNK04_14275 PF01515 Phosphate acetyl/butaryl transferase GNK04_14280 PF00158 Sigma-54 interaction domain GNK04_14280 PF02954 Bacterial regulatory protein, Fis family GNK04_14280 PF00989 PAS fold GNK04_14285 PF11118 Protein of unknown function (DUF2627) GNK04_14290 PF00072 Response regulator receiver domain GNK04_14290 PF08769 Sporulation initiation factor Spo0A C terminal GNK04_14295 PF17820 PDZ domain GNK04_14295 PF05580 SpoIVB peptidase S55 GNK04_14300 PF02463 RecF/RecN/SMC N terminal domain GNK04_14305 PF01316 Arginine repressor, DNA binding domain GNK04_14305 PF02863 Arginine repressor, C-terminal domain GNK04_14310 PF01728 FtsJ-like methyltransferase GNK04_14310 PF01479 S4 domain GNK04_14315 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GNK04_14315 PF02779 Transketolase, pyrimidine binding domain GNK04_14315 PF02780 Transketolase, C-terminal domain GNK04_14325 PF00348 Polyprenyl synthetase GNK04_14330 PF02609 Exonuclease VII small subunit GNK04_14335 PF02601 Exonuclease VII, large subunit GNK04_14335 PF13742 OB-fold nucleic acid binding domain GNK04_14340 PF01029 NusB family GNK04_14345 PF03780 Asp23 family, cell envelope-related function GNK04_14350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNK04_14350 PF02785 Biotin carboxylase C-terminal domain GNK04_14350 PF00289 Biotin carboxylase, N-terminal domain GNK04_14355 PF00364 Biotin-requiring enzyme GNK04_14360 PF12685 SpoIIIAH-like protein GNK04_14370 PF09581 Stage III sporulation protein AF (Spore_III_AF) GNK04_14375 PF09546 Stage III sporulation protein AE (spore_III_AE) GNK04_14380 PF06686 Stage III sporulation protein AC/AD protein family GNK04_14385 PF06686 Stage III sporulation protein AC/AD protein family GNK04_14390 PF09548 Stage III sporulation protein AB (spore_III_AB) GNK04_14400 PF10942 Protein of unknown function (DUF2619) GNK04_14415 PF00005 ABC transporter GNK04_14420 PF08207 Elongation factor P (EF-P) KOW-like domain GNK04_14420 PF09285 Elongation factor P, C-terminal GNK04_14420 PF01132 Elongation factor P (EF-P) OB domain GNK04_14425 PF01321 Creatinase/Prolidase N-terminal domain GNK04_14425 PF00557 Metallopeptidase family M24 GNK04_14430 PF01220 Dehydroquinase class II GNK04_14435 PF11085 Conserved membrane protein YqhR GNK04_14440 PF07136 Protein of unknown function (DUF1385) GNK04_14450 PF01734 Patatin-like phospholipase GNK04_14455 PF01325 Iron dependent repressor, N-terminal DNA binding domain GNK04_14455 PF02742 Iron dependent repressor, metal binding and dimerisation domain GNK04_14460 PF02867 Ribonucleotide reductase, barrel domain GNK04_14460 PF00317 Ribonucleotide reductase, all-alpha domain GNK04_14460 PF03477 ATP cone domain GNK04_14465 PF03099 Biotin/lipoate A/B protein ligase family GNK04_14470 PF00581 Rhodanese-like domain GNK04_14475 PF02347 Glycine cleavage system P-protein GNK04_14480 PF02347 Glycine cleavage system P-protein GNK04_14485 PF08669 Glycine cleavage T-protein C-terminal barrel domain GNK04_14485 PF01571 Aminomethyltransferase folate-binding domain GNK04_14490 PF00271 Helicase conserved C-terminal domain GNK04_14490 PF00176 SNF2 family N-terminal domain GNK04_14495 PF11079 Bacterial protein YqhG of unknown function GNK04_14505 PF01202 Shikimate kinase GNK04_14530 PF07963 Prokaryotic N-terminal methylation motif GNK04_14540 PF00437 Type II/IV secretion system protein GNK04_14565 PF03960 ArsC family GNK04_14570 PF11117 Protein of unknown function (DUF2626) GNK04_14580 PF00753 Metallo-beta-lactamase superfamily GNK04_14590 PF10958 Protein of unknown function (DUF2759) GNK04_14595 PF01910 Thiamine-binding protein GNK04_14600 PF03649 Uncharacterised protein family (UPF0014) GNK04_14605 PF00005 ABC transporter GNK04_14610 PF08543 Phosphomethylpyrimidine kinase GNK04_14615 PF01266 FAD dependent oxidoreductase GNK04_14620 PF05690 Thiazole biosynthesis protein ThiG GNK04_14630 PF02581 Thiamine monophosphate synthase GNK04_14635 PF01476 LysM domain GNK04_14635 PF00246 Zinc carboxypeptidase GNK04_14645 PF00884 Sulfatase GNK04_14650 PF00480 ROK family GNK04_14655 PF00881 Nitroreductase family GNK04_14660 PF06014 Bacterial protein of unknown function (DUF910) GNK04_14665 PF03323 Bacillus/Clostridium GerA spore germination protein GNK04_14670 PF05343 M42 glutamyl aminopeptidase GNK04_14680 PF13419 Haloacid dehalogenase-like hydrolase GNK04_14690 PF00899 ThiF family GNK04_14695 PF12804 MobA-like NTP transferase domain GNK04_14705 PF01812 5-formyltetrahydrofolate cyclo-ligase family GNK04_14710 PF00471 Ribosomal protein L33 GNK04_14720 PF01895 PhoU domain GNK04_14725 PF00005 ABC transporter GNK04_14730 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_14735 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_14740 PF12849 PBP superfamily domain GNK04_14750 PF07690 Major Facilitator Superfamily GNK04_14760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNK04_14760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNK04_14800 PF04306 Protein of unknown function (DUF456) GNK04_14805 PF01895 PhoU domain GNK04_14810 PF06691 Protein of unknown function (DUF1189) GNK04_14815 PF01053 Cys/Met metabolism PLP-dependent enzyme GNK04_14820 PF01053 Cys/Met metabolism PLP-dependent enzyme GNK04_14825 PF02574 Homocysteine S-methyltransferase GNK04_14825 PF02219 Methylenetetrahydrofolate reductase GNK04_14830 PF02310 B12 binding domain GNK04_14830 PF02965 Vitamin B12 dependent methionine synthase, activation domain GNK04_14830 PF02574 Homocysteine S-methyltransferase GNK04_14830 PF00809 Pterin binding enzyme GNK04_14830 PF02607 B12 binding domain GNK04_14835 PF14824 Sirohaem biosynthesis protein central GNK04_14840 PF01903 CbiX GNK04_14845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNK04_14855 PF01747 ATP-sulfurylase GNK04_14855 PF14306 PUA-like domain GNK04_14860 PF01384 Phosphate transporter family GNK04_14865 PF01507 Phosphoadenosine phosphosulfate reductase family GNK04_14890 PF04551 GcpE protein GNK04_14905 PF01475 Ferric uptake regulator family GNK04_14910 PF00950 ABC 3 transport family GNK04_14915 PF00005 ABC transporter GNK04_14925 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_14925 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_14935 PF01261 Xylose isomerase-like TIM barrel GNK04_14940 PF00270 DEAD/DEAH box helicase GNK04_14940 PF00271 Helicase conserved C-terminal domain GNK04_14950 PF02401 LytB protein GNK04_14955 PF01784 NIF3 (NGG1p interacting factor 3) GNK04_14960 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GNK04_14965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNK04_14970 PF00501 AMP-binding enzyme GNK04_14970 PF13193 AMP-binding enzyme C-terminal domain GNK04_14975 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_14975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_14975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_14980 PF04539 Sigma-70 region 3 GNK04_14980 PF03979 Sigma-70 factor, region 1.1 GNK04_14980 PF04545 Sigma-70, region 4 GNK04_14980 PF00140 Sigma-70 factor, region 1.2 GNK04_14980 PF04542 Sigma-70 region 2 GNK04_14985 PF01807 CHC2 zinc finger GNK04_14985 PF08275 DNA primase catalytic core, N-terminal domain GNK04_14985 PF10410 DnaB-helicase binding domain of primase GNK04_14990 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GNK04_14995 PF03618 Kinase/pyrophosphorylase GNK04_15000 PF08279 HTH domain GNK04_15000 PF00571 CBS domain GNK04_15005 PF11967 Recombination protein O N terminal GNK04_15005 PF02565 Recombination protein O C terminal GNK04_15010 PF14006 YqzL-like protein GNK04_15015 PF07650 KH domain GNK04_15015 PF01926 50S ribosome-binding GTPase GNK04_15020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNK04_15025 PF01219 Prokaryotic diacylglycerol kinase GNK04_15030 PF02130 Uncharacterized protein family UPF0054 GNK04_15035 PF01966 HD domain GNK04_15035 PF07697 7TM-HD extracellular GNK04_15035 PF07698 7TM receptor with intracellular HD hydrolase GNK04_15040 PF02562 PhoH-like protein GNK04_15045 PF06898 Putative stage IV sporulation protein YqfD GNK04_15050 PF07873 YabP family GNK04_15060 PF12127 SigmaW regulon antibacterial GNK04_15065 PF01957 NfeD-like C-terminal, partner-binding GNK04_15065 PF01972 Serine dehydrogenase proteinase GNK04_15070 PF09424 Yqey-like protein GNK04_15075 PF01165 Ribosomal protein S21 GNK04_15080 PF02690 Na+/Pi-cotransporter GNK04_15085 PF01791 DeoC/LacD family aldolase GNK04_15090 PF01938 TRAM domain GNK04_15090 PF04055 Radical SAM superfamily GNK04_15090 PF00919 Uncharacterized protein family UPF0004 GNK04_15095 PF04452 RNA methyltransferase GNK04_15105 PF00226 DnaJ domain GNK04_15105 PF01556 DnaJ C terminal domain GNK04_15105 PF00684 DnaJ central domain GNK04_15110 PF00012 Hsp70 protein GNK04_15115 PF01025 GrpE GNK04_15120 PF01628 HrcA protein C terminal domain GNK04_15120 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding GNK04_15125 PF04055 Radical SAM superfamily GNK04_15125 PF06969 HemN C-terminal domain GNK04_15130 PF14492 Elongation Factor G, domain II GNK04_15130 PF00009 Elongation factor Tu GTP binding domain GNK04_15130 PF03144 Elongation factor Tu domain 2 GNK04_15130 PF06421 GTP-binding protein LepA C-terminus GNK04_15130 PF00679 Elongation factor G C-terminus GNK04_15140 PF03418 Germination protease GNK04_15145 PF01649 Ribosomal protein S20 GNK04_15150 PF06144 DNA polymerase III, delta subunit GNK04_15155 PF14141 YqzM-like protein GNK04_15160 PF00753 Metallo-beta-lactamase superfamily GNK04_15160 PF13567 Domain of unknown function (DUF4131) GNK04_15160 PF03772 Competence protein GNK04_15165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNK04_15170 PF10531 SLBB domain GNK04_15175 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNK04_15175 PF03807 NADP oxidoreductase coenzyme F420-dependent GNK04_15180 PF13649 Methyltransferase domain GNK04_15190 PF01966 HD domain GNK04_15195 PF01467 Cytidylyltransferase-like GNK04_15200 PF01985 CRS1 / YhbY (CRM) domain GNK04_15205 PF01488 Shikimate / quinate 5-dehydrogenase GNK04_15205 PF08501 Shikimate dehydrogenase substrate binding domain GNK04_15205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GNK04_15210 PF01926 50S ribosome-binding GTPase GNK04_15220 PF08970 Sporulation inhibitor A GNK04_15230 PF13244 Domain of unknown function (DUF4040) GNK04_15230 PF00361 Proton-conducting membrane transporter GNK04_15230 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GNK04_15235 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GNK04_15240 PF00361 Proton-conducting membrane transporter GNK04_15250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GNK04_15260 PF08756 YfkB-like domain GNK04_15260 PF04055 Radical SAM superfamily GNK04_15265 PF13472 GDSL-like Lipase/Acylhydrolase family GNK04_15265 PF02348 Cytidylyltransferase GNK04_15270 PF04545 Sigma-70, region 4 GNK04_15270 PF04542 Sigma-70 region 2 GNK04_15280 PF02082 Transcriptional regulator GNK04_15285 PF00042 Globin GNK04_15285 PF00175 Oxidoreductase NAD-binding domain GNK04_15285 PF00970 Oxidoreductase FAD-binding domain GNK04_15300 PF02540 NAD synthase GNK04_15325 PF14143 YrhC-like protein GNK04_15330 PF01053 Cys/Met metabolism PLP-dependent enzyme GNK04_15335 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_15340 PF02664 S-Ribosylhomocysteinase (LuxS) GNK04_15345 PF01048 Phosphorylase superfamily GNK04_15350 PF13649 Methyltransferase domain GNK04_15355 PF10750 Protein of unknown function (DUF2536) GNK04_15365 PF03717 Penicillin-binding Protein dimerisation domain GNK04_15365 PF00905 Penicillin binding protein transpeptidase domain GNK04_15370 PF01272 Transcription elongation factor, GreA/GreB, C-term GNK04_15370 PF03449 Transcription elongation factor, N-terminal GNK04_15375 PF00485 Phosphoribulokinase / Uridine kinase family GNK04_15385 PF02618 YceG-like family GNK04_15390 PF06949 Protein of unknown function (DUF1292) GNK04_15395 PF03652 Holliday junction resolvase GNK04_15400 PF06135 IreB regulatory phosphoprotein GNK04_15405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNK04_15405 PF01411 tRNA synthetases class II (A) GNK04_15405 PF02272 DHHA1 domain GNK04_15410 PF01594 AI-2E family transporter GNK04_15420 PF13538 UvrD-like helicase C-terminal domain GNK04_15420 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GNK04_15420 PF14490 Helix-hairpin-helix containing domain GNK04_15435 PF00266 Aminotransferase class-V GNK04_15440 PF02082 Transcriptional regulator GNK04_15450 PF05496 Holliday junction DNA helicase RuvB P-loop domain GNK04_15450 PF12002 MgsA AAA+ ATPase C terminal GNK04_15450 PF16193 AAA C-terminal domain GNK04_15465 PF01336 OB-fold nucleic acid binding domain GNK04_15465 PF00152 tRNA synthetases class II (D, K and N) GNK04_15465 PF02938 GAD domain GNK04_15470 PF13393 Histidyl-tRNA synthetase GNK04_15470 PF03129 Anticodon binding domain GNK04_15480 PF08239 Bacterial SH3 domain GNK04_15480 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_15485 PF02580 D-Tyr-tRNA(Tyr) deacylase GNK04_15490 PF02824 TGS domain GNK04_15490 PF04607 Region found in RelA / SpoT proteins GNK04_15490 PF13291 ACT domain GNK04_15495 PF00156 Phosphoribosyl transferase domain GNK04_15500 PF01368 DHH family GNK04_15500 PF02272 DHHA1 domain GNK04_15500 PF17768 RecJ OB domain GNK04_15500 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GNK04_15505 PF06305 Lipopolysaccharide assembly protein A domain GNK04_15510 PF16916 Dimerisation domain of Zinc Transporter GNK04_15510 PF01545 Cation efflux family GNK04_15530 PF14667 Polysaccharide biosynthesis C-terminal domain GNK04_15530 PF01943 Polysaccharide biosynthesis protein GNK04_15535 PF04239 Protein of unknown function (DUF421) GNK04_15540 PF03600 Citrate transporter GNK04_15545 PF12670 Protein of unknown function (DUF3792) GNK04_15550 PF02699 Preprotein translocase subunit GNK04_15555 PF01702 Queuine tRNA-ribosyltransferase GNK04_15560 PF02547 Queuosine biosynthesis protein GNK04_15565 PF11146 Protein of unknown function (DUF2905) GNK04_15570 PF17864 RuvB AAA lid domain GNK04_15570 PF05491 RuvB C-terminal winged helix domain GNK04_15570 PF05496 Holliday junction DNA helicase RuvB P-loop domain GNK04_15575 PF07499 RuvA, C-terminal domain GNK04_15575 PF01330 RuvA N terminal domain GNK04_15580 PF08955 BofC C-terminal domain GNK04_15580 PF08977 Bypass of Forespore C, N terminal GNK04_15585 PF01709 Transcriptional regulator GNK04_15590 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNK04_15600 PF01476 LysM domain GNK04_15605 PF02445 Quinolinate synthetase A protein GNK04_15610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GNK04_15610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GNK04_15615 PF02910 Fumarate reductase flavoprotein C-term GNK04_15615 PF00890 FAD binding domain GNK04_15620 PF00266 Aminotransferase class-V GNK04_15625 PF02829 3H domain GNK04_15625 PF08279 HTH domain GNK04_15630 PF01842 ACT domain GNK04_15630 PF00800 Prephenate dehydratase GNK04_15635 PF01842 ACT domain GNK04_15640 PF01926 50S ribosome-binding GTPase GNK04_15640 PF01018 GTP1/OBG GNK04_15640 PF09269 Domain of unknown function (DUF1967) GNK04_15645 PF14682 Sporulation initiation phospho-transferase B, C-terminal GNK04_15645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNK04_15650 PF01016 Ribosomal L27 protein GNK04_15655 PF04327 Cysteine protease Prp GNK04_15660 PF00829 Ribosomal prokaryotic L21 protein GNK04_15665 PF10150 Ribonuclease E/G family GNK04_15665 PF00575 S1 RNA binding domain GNK04_15670 PF02163 Peptidase family M50 GNK04_15680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GNK04_15685 PF03775 Septum formation inhibitor MinC, C-terminal domain GNK04_15690 PF04093 rod shape-determining protein MreD GNK04_15695 PF04085 rod shape-determining protein MreC GNK04_15705 PF04002 RadC-like JAB domain GNK04_15710 PF02545 Maf-like protein GNK04_15720 PF06750 Bacterial Peptidase A24 N-terminal domain GNK04_15720 PF01478 Type IV leader peptidase family GNK04_15725 PF07694 5TMR of 5TMR-LYT GNK04_15725 PF00990 Diguanylate cyclase, GGDEF domain GNK04_15730 PF02875 Mur ligase family, glutamate ligase domain GNK04_15730 PF08245 Mur ligase middle domain GNK04_15735 PF10458 Valyl tRNA synthetase tRNA binding arm GNK04_15735 PF00133 tRNA synthetases class I (I, L, M and V) GNK04_15735 PF08264 Anticodon-binding domain of tRNA GNK04_15755 PF01476 LysM domain GNK04_15755 PF01476 LysM domain GNK04_15760 PF00202 Aminotransferase class-III GNK04_15765 PF00490 Delta-aminolevulinic acid dehydratase GNK04_15775 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GNK04_15775 PF03900 Porphobilinogen deaminase, C-terminal domain GNK04_15780 PF01578 Cytochrome C assembly protein GNK04_15785 PF01488 Shikimate / quinate 5-dehydrogenase GNK04_15785 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GNK04_15785 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GNK04_15795 PF00005 ABC transporter GNK04_15800 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_15805 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNK04_15810 PF01926 50S ribosome-binding GTPase GNK04_15815 PF05362 Lon protease (S16) C-terminal proteolytic domain GNK04_15815 PF00004 ATPase family associated with various cellular activities (AAA) GNK04_15815 PF02190 ATP-dependent protease La (LON) substrate-binding domain GNK04_15820 PF05362 Lon protease (S16) C-terminal proteolytic domain GNK04_15820 PF00004 ATPase family associated with various cellular activities (AAA) GNK04_15825 PF10431 C-terminal, D2-small domain, of ClpB protein GNK04_15825 PF06689 ClpX C4-type zinc finger GNK04_15825 PF07724 AAA domain (Cdc48 subfamily) GNK04_15830 PF05697 Bacterial trigger factor protein (TF) GNK04_15830 PF05698 Bacterial trigger factor protein (TF) C-terminus GNK04_15830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNK04_15850 PF01725 Ham1 family GNK04_15855 PF03725 3' exoribonuclease family, domain 2 GNK04_15855 PF01138 3' exoribonuclease family, domain 1 GNK04_15860 PF10646 Sporulation and spore germination GNK04_15865 PF01177 Asp/Glu/Hydantoin racemase GNK04_15870 PF01047 MarR family GNK04_15875 PF00391 PEP-utilising enzyme, mobile domain GNK04_15875 PF05524 PEP-utilising enzyme, N-terminal GNK04_15875 PF02896 PEP-utilising enzyme, TIM barrel domain GNK04_15880 PF00381 PTS HPr component phosphorylation site GNK04_15885 PF02378 Phosphotransferase system, EIIC GNK04_15885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNK04_15885 PF00367 phosphotransferase system, EIIB GNK04_15890 PF03123 CAT RNA binding domain GNK04_15890 PF00874 PRD domain GNK04_15895 PF00196 Bacterial regulatory proteins, luxR family GNK04_15900 PF13085 2Fe-2S iron-sulfur cluster binding domain GNK04_15900 PF13183 4Fe-4S dicluster domain GNK04_15905 PF02910 Fumarate reductase flavoprotein C-term GNK04_15905 PF00890 FAD binding domain GNK04_15910 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GNK04_15915 PF10702 Protein of unknown function (DUF2507) GNK04_15920 PF13840 ACT domain GNK04_15920 PF00696 Amino acid kinase family GNK04_15925 PF08459 UvrC Helix-hairpin-helix N-terminal GNK04_15925 PF01541 GIY-YIG catalytic domain GNK04_15925 PF02151 UvrB/uvrC motif GNK04_15935 PF03239 Iron permease FTR1 family GNK04_15945 PF00535 Glycosyl transferase family 2 GNK04_15960 PF01370 NAD dependent epimerase/dehydratase family GNK04_15970 PF00085 Thioredoxin GNK04_15975 PF01012 Electron transfer flavoprotein domain GNK04_15975 PF00766 Electron transfer flavoprotein FAD-binding domain GNK04_15980 PF01012 Electron transfer flavoprotein domain GNK04_15985 PF00378 Enoyl-CoA hydratase/isomerase GNK04_15990 PF00440 Bacterial regulatory proteins, tetR family GNK04_15990 PF08359 YsiA-like protein, C-terminal region GNK04_15995 PF13193 AMP-binding enzyme C-terminal domain GNK04_15995 PF00501 AMP-binding enzyme GNK04_16000 PF03994 Domain of Unknown Function (DUF350) GNK04_16005 PF00488 MutS domain V GNK04_16005 PF01713 Smr domain GNK04_16010 PF14716 Helix-hairpin-helix domain GNK04_16010 PF02811 PHP domain GNK04_16010 PF14791 DNA polymerase beta thumb GNK04_16020 PF05164 Cell division protein ZapA GNK04_16025 PF01351 Ribonuclease HII GNK04_16025 PF11858 Domain of unknown function (DUF3378) GNK04_16030 PF01156 Inosine-uridine preferring nucleoside hydrolase GNK04_16035 PF07670 Nucleoside recognition GNK04_16035 PF07662 Na+ dependent nucleoside transporter C-terminus GNK04_16035 PF01773 Na+ dependent nucleoside transporter N-terminus GNK04_16040 PF01588 Putative tRNA binding domain GNK04_16040 PF03147 Ferredoxin-fold anticodon binding domain GNK04_16040 PF03484 tRNA synthetase B5 domain GNK04_16040 PF03483 B3/4 domain GNK04_16040 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GNK04_16045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GNK04_16045 PF01409 tRNA synthetases class II core domain (F) GNK04_16050 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNK04_16050 PF00588 SpoU rRNA Methylase family GNK04_16055 PF14098 Small, acid-soluble spore protein I GNK04_16060 PF05343 M42 glutamyl aminopeptidase GNK04_16080 PF01654 Cytochrome bd terminal oxidase subunit I GNK04_16085 PF02322 Cytochrome bd terminal oxidase subunit II GNK04_16100 PF01632 Ribosomal protein L35 GNK04_16105 PF05198 Translation initiation factor IF-3, N-terminal domain GNK04_16105 PF00707 Translation initiation factor IF-3, C-terminal domain GNK04_16110 PF02824 TGS domain GNK04_16110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNK04_16110 PF03129 Anticodon binding domain GNK04_16110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNK04_16115 PF08812 YtxC-like family GNK04_16120 PF07319 Primosomal protein DnaI N-terminus GNK04_16120 PF01695 IstB-like ATP binding protein GNK04_16125 PF07261 Replication initiation and membrane attachment GNK04_16130 PF03477 ATP cone domain GNK04_16140 PF02675 S-adenosylmethionine decarboxylase GNK04_16145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNK04_16145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNK04_16150 PF01121 Dephospho-CoA kinase GNK04_16155 PF02659 Putative manganese efflux pump GNK04_16160 PF06827 Zinc finger found in FPG and IleRS GNK04_16160 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GNK04_16160 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GNK04_16165 PF01367 5'-3' exonuclease, C-terminal SAM fold GNK04_16165 PF00476 DNA polymerase family A GNK04_16165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNK04_16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_16170 PF16736 Single Cache-like GNK04_16170 PF00989 PAS fold GNK04_16170 PF00512 His Kinase A (phospho-acceptor) domain GNK04_16175 PF00486 Transcriptional regulatory protein, C terminal GNK04_16175 PF00072 Response regulator receiver domain GNK04_16185 PF00056 lactate/malate dehydrogenase, NAD binding domain GNK04_16185 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNK04_16190 PF00180 Isocitrate/isopropylmalate dehydrogenase GNK04_16195 PF00285 Citrate synthase, C-terminal domain GNK04_16200 PF04284 Protein of unknown function (DUF441) GNK04_16205 PF01594 AI-2E family transporter GNK04_16215 PF00881 Nitroreductase family GNK04_16220 PF01047 MarR family GNK04_16225 PF04186 FxsA cytoplasmic membrane protein GNK04_16230 PF00224 Pyruvate kinase, barrel domain GNK04_16230 PF02887 Pyruvate kinase, alpha/beta domain GNK04_16230 PF00391 PEP-utilising enzyme, mobile domain GNK04_16235 PF00365 Phosphofructokinase GNK04_16240 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GNK04_16245 PF17848 Acetyl-coA carboxylase zinc finger domain GNK04_16245 PF01039 Carboxyl transferase domain GNK04_16250 PF07729 FCD domain GNK04_16250 PF00392 Bacterial regulatory proteins, gntR family GNK04_16255 PF00390 Malic enzyme, N-terminal domain GNK04_16255 PF03949 Malic enzyme, NAD binding domain GNK04_16260 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNK04_16260 PF14579 Helix-hairpin-helix motif GNK04_16260 PF02811 PHP domain GNK04_16260 PF01336 OB-fold nucleic acid binding domain GNK04_16260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNK04_16265 PF14034 Sporulation protein YtrH GNK04_16280 PF02272 DHHA1 domain GNK04_16280 PF01368 DHH family GNK04_16290 PF03061 Thioesterase superfamily GNK04_16290 PF00571 CBS domain GNK04_16290 PF07085 DRTGG domain GNK04_16290 PF00392 Bacterial regulatory proteins, gntR family GNK04_16310 PF03994 Domain of Unknown Function (DUF350) GNK04_16320 PF04012 PspA/IM30 family GNK04_16335 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GNK04_16335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNK04_16340 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GNK04_16345 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GNK04_16365 PF00994 Probable molybdopterin binding domain GNK04_16370 PF12787 EcsC protein family GNK04_16375 PF00871 Acetokinase family GNK04_16380 PF02384 N-6 DNA Methylase GNK04_16385 PF08534 Redoxin GNK04_16390 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GNK04_16400 PF06271 RDD family GNK04_16405 PF01343 Peptidase family S49 GNK04_16410 PF01513 ATP-NAD kinase GNK04_16415 PF07969 Amidohydrolase family GNK04_16420 PF04101 Glycosyltransferase family 28 C-terminal domain GNK04_16420 PF03033 Glycosyltransferase family 28 N-terminal domain GNK04_16425 PF13193 AMP-binding enzyme C-terminal domain GNK04_16425 PF00501 AMP-binding enzyme GNK04_16430 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNK04_16435 PF02926 THUMP domain GNK04_16435 PF02568 Thiamine biosynthesis protein (ThiI) GNK04_16440 PF00266 Aminotransferase class-V GNK04_16445 PF05525 Branched-chain amino acid transport protein GNK04_16450 PF06160 Septation ring formation regulator, EzrA GNK04_16455 PF02811 PHP domain GNK04_16460 PF00440 Bacterial regulatory proteins, tetR family GNK04_16465 PF13185 GAF domain GNK04_16470 PF01053 Cys/Met metabolism PLP-dependent enzyme GNK04_16475 PF01479 S4 domain GNK04_16475 PF00163 Ribosomal protein S4/S9 N-terminal domain GNK04_16480 PF01479 S4 domain GNK04_16480 PF00579 tRNA synthetases class I (W and Y) GNK04_16485 PF00912 Transglycosylase GNK04_16485 PF00905 Penicillin binding protein transpeptidase domain GNK04_16490 PF13193 AMP-binding enzyme C-terminal domain GNK04_16490 PF00501 AMP-binding enzyme GNK04_16495 PF00583 Acetyltransferase (GNAT) family GNK04_16500 PF00571 CBS domain GNK04_16505 PF00850 Histone deacetylase domain GNK04_16510 PF00356 Bacterial regulatory proteins, lacI family GNK04_16515 PF01817 Chorismate mutase type II GNK04_16515 PF00793 DAHP synthetase I family GNK04_16520 PF11009 Protein of unknown function (DUF2847) GNK04_16525 PF12732 YtxH-like protein GNK04_16535 PF01225 Mur ligase family, catalytic domain GNK04_16535 PF02875 Mur ligase family, glutamate ligase domain GNK04_16535 PF08245 Mur ligase middle domain GNK04_16545 PF01580 FtsK/SpoIIIE family GNK04_16545 PF09397 Ftsk gamma domain GNK04_16545 PF17854 FtsK alpha domain GNK04_16550 PF01588 Putative tRNA binding domain GNK04_16550 PF14794 Domain of unknown function (DUF4479) GNK04_16555 PF07285 Protein of unknown function (DUF1444) GNK04_16560 PF00085 Thioredoxin GNK04_16570 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ GNK04_16575 PF01931 Protein of unknown function DUF84 GNK04_16580 PF05343 M42 glutamyl aminopeptidase GNK04_16595 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNK04_16595 PF03807 NADP oxidoreductase coenzyme F420-dependent GNK04_16600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNK04_16600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNK04_16605 PF00294 pfkB family carbohydrate kinase GNK04_16610 PF08220 DeoR-like helix-turn-helix domain GNK04_16610 PF00455 DeoR C terminal sensor domain GNK04_16615 PF00753 Metallo-beta-lactamase superfamily GNK04_16620 PF02390 Putative methyltransferase GNK04_16630 PF01636 Phosphotransferase enzyme family GNK04_16635 PF00128 Alpha amylase, catalytic domain GNK04_16635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNK04_16635 PF17999 Pullulanase N1-terminal domain GNK04_16640 PF04172 LrgB-like family GNK04_16645 PF03788 LrgA family GNK04_16655 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_16660 PF01546 Peptidase family M20/M25/M40 GNK04_16665 PF00027 Cyclic nucleotide-binding domain GNK04_16665 PF07885 Ion channel GNK04_16670 PF08220 DeoR-like helix-turn-helix domain GNK04_16680 PF00849 RNA pseudouridylate synthase GNK04_16680 PF01479 S4 domain GNK04_16695 PF14667 Polysaccharide biosynthesis C-terminal domain GNK04_16695 PF01943 Polysaccharide biosynthesis protein GNK04_16705 PF00271 Helicase conserved C-terminal domain GNK04_16705 PF00270 DEAD/DEAH box helicase GNK04_16710 PF01464 Transglycosylase SLT domain GNK04_16720 PF00581 Rhodanese-like domain GNK04_16725 PF08264 Anticodon-binding domain of tRNA GNK04_16725 PF00133 tRNA synthetases class I (I, L, M and V) GNK04_16725 PF13603 Leucyl-tRNA synthetase, Domain 2 GNK04_16725 PF09334 tRNA synthetases class I (M) GNK04_16735 PF06962 Putative rRNA methylase GNK04_16745 PF10776 Protein of unknown function (DUF2600) GNK04_16750 PF12146 Serine aminopeptidase, S33 GNK04_16755 PF00132 Bacterial transferase hexapeptide (six repeats) GNK04_16765 PF01569 PAP2 superfamily GNK04_16770 PF00534 Glycosyl transferases group 1 GNK04_16770 PF13439 Glycosyltransferase Family 4 GNK04_16775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNK04_16775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNK04_16775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNK04_16785 PF02773 S-adenosylmethionine synthetase, C-terminal domain GNK04_16785 PF00438 S-adenosylmethionine synthetase, N-terminal domain GNK04_16785 PF02772 S-adenosylmethionine synthetase, central domain GNK04_16790 PF01293 Phosphoenolpyruvate carboxykinase GNK04_16800 PF00005 ABC transporter GNK04_16805 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_16810 PF01545 Cation efflux family GNK04_16810 PF16916 Dimerisation domain of Zinc Transporter GNK04_16815 PF00293 NUDIX domain GNK04_16845 PF00580 UvrD/REP helicase N-terminal domain GNK04_16845 PF13361 UvrD-like helicase C-terminal domain GNK04_16855 PF12823 Domain of unknown function (DUF3817) GNK04_16860 PF13378 Enolase C-terminal domain-like GNK04_16860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNK04_16865 PF00501 AMP-binding enzyme GNK04_16865 PF13193 AMP-binding enzyme C-terminal domain GNK04_16870 PF00378 Enoyl-CoA hydratase/isomerase GNK04_16875 PF12697 Alpha/beta hydrolase family GNK04_16880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNK04_16880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNK04_16880 PF16582 Middle domain of thiamine pyrophosphate GNK04_16885 PF00425 chorismate binding enzyme GNK04_16895 PF01040 UbiA prenyltransferase family GNK04_16900 PF03061 Thioesterase superfamily GNK04_16910 PF00565 Staphylococcal nuclease homologue GNK04_16920 PF00664 ABC transporter transmembrane region GNK04_16920 PF00005 ABC transporter GNK04_16925 PF00664 ABC transporter transmembrane region GNK04_16925 PF00005 ABC transporter GNK04_16935 PF00294 pfkB family carbohydrate kinase GNK04_16940 PF00171 Aldehyde dehydrogenase family GNK04_16945 PF02675 S-adenosylmethionine decarboxylase GNK04_16950 PF13243 Squalene-hopene cyclase C-terminal domain GNK04_16950 PF13249 Squalene-hopene cyclase N-terminal domain GNK04_16960 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNK04_16960 PF03807 NADP oxidoreductase coenzyme F420-dependent GNK04_16965 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNK04_16970 PF09125 Cytochrome C oxidase subunit II, transmembrane GNK04_16970 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GNK04_16980 PF00027 Cyclic nucleotide-binding domain GNK04_16980 PF00325 Bacterial regulatory proteins, crp family GNK04_16990 PF09587 Bacterial capsule synthesis protein PGA_cap GNK04_17005 PF02681 Divergent PAP2 family GNK04_17015 PF00270 DEAD/DEAH box helicase GNK04_17015 PF00271 Helicase conserved C-terminal domain GNK04_17025 PF00072 Response regulator receiver domain GNK04_17040 PF02824 TGS domain GNK04_17040 PF13291 ACT domain GNK04_17040 PF04607 Region found in RelA / SpoT proteins GNK04_17045 PF04235 Protein of unknown function (DUF418) GNK04_17050 PF08281 Sigma-70, region 4 GNK04_17050 PF04542 Sigma-70 region 2 GNK04_17060 PF10011 Predicted membrane protein (DUF2254) GNK04_17070 PF01472 PUA domain GNK04_17070 PF00696 Amino acid kinase family GNK04_17075 PF00171 Aldehyde dehydrogenase family GNK04_17080 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_17080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNK04_17095 PF01476 LysM domain GNK04_17095 PF06725 3D domain GNK04_17100 PF00664 ABC transporter transmembrane region GNK04_17100 PF00005 ABC transporter GNK04_17105 PF00664 ABC transporter transmembrane region GNK04_17105 PF00005 ABC transporter GNK04_17115 PF02342 TerD domain GNK04_17135 PF02525 Flavodoxin-like fold GNK04_17140 PF05726 Pirin C-terminal cupin domain GNK04_17140 PF02678 Pirin GNK04_17145 PF06013 Proteins of 100 residues with WXG GNK04_17150 PF08817 WXG100 protein secretion system (Wss), protein YukD GNK04_17155 PF10140 WXG100 protein secretion system (Wss), protein YukC GNK04_17160 PF01580 FtsK/SpoIIIE family GNK04_17160 PF12538 DNA transporter GNK04_17175 PF00144 Beta-lactamase GNK04_17180 PF03413 Peptidase propeptide and YPEB domain GNK04_17180 PF07504 Fungalysin/Thermolysin Propeptide Motif GNK04_17180 PF01447 Thermolysin metallopeptidase, catalytic domain GNK04_17180 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNK04_17190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNK04_17200 PF14449 Pre-toxin TG GNK04_17200 PF04740 LXG domain of WXG superfamily GNK04_17210 PF00092 von Willebrand factor type A domain GNK04_17215 PF00155 Aminotransferase class I and II GNK04_17220 PF00253 Ribosomal protein S14p/S29e GNK04_17225 PF02492 CobW/HypB/UreG, nucleotide-binding domain GNK04_17225 PF07683 Cobalamin synthesis protein cobW C-terminal domain GNK04_17240 PF03773 Predicted permease GNK04_17245 PF07683 Cobalamin synthesis protein cobW C-terminal domain GNK04_17245 PF02492 CobW/HypB/UreG, nucleotide-binding domain GNK04_17250 PF01297 Zinc-uptake complex component A periplasmic GNK04_17250 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GNK04_17255 PF10138 vWA found in TerF C terminus GNK04_17265 PF01638 HxlR-like helix-turn-helix GNK04_17270 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GNK04_17280 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_17280 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_17290 PF00356 Bacterial regulatory proteins, lacI family GNK04_17295 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_17295 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_17300 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_17300 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_17305 PF01547 Bacterial extracellular solute-binding protein GNK04_17310 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_17315 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_17320 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_17320 PF00107 Zinc-binding dehydrogenase GNK04_17320 PF13823 Alcohol dehydrogenase GroES-associated GNK04_17335 PF13180 PDZ domain GNK04_17340 PF18665 Tetracyclin repressor-like, C-terminal domain GNK04_17340 PF00440 Bacterial regulatory proteins, tetR family GNK04_17350 PF00732 GMC oxidoreductase GNK04_17350 PF05199 GMC oxidoreductase GNK04_17365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNK04_17375 PF01212 Beta-eliminating lyase GNK04_17390 PF00206 Lyase GNK04_17390 PF14698 Argininosuccinate lyase C-terminal GNK04_17395 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_17400 PF08402 TOBE domain GNK04_17400 PF00005 ABC transporter GNK04_17410 PF01325 Iron dependent repressor, N-terminal DNA binding domain GNK04_17410 PF00480 ROK family GNK04_17420 PF01418 Helix-turn-helix domain, rpiR family GNK04_17420 PF01380 SIS domain GNK04_17425 PF02423 Ornithine cyclodeaminase/mu-crystallin family GNK04_17450 PF04239 Protein of unknown function (DUF421) GNK04_17455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNK04_17455 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GNK04_17460 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GNK04_17465 PF03480 Bacterial extracellular solute-binding protein, family 7 GNK04_17470 PF02502 Ribose/Galactose Isomerase GNK04_17475 PF00356 Bacterial regulatory proteins, lacI family GNK04_17475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNK04_17490 PF00378 Enoyl-CoA hydratase/isomerase GNK04_17495 PF13193 AMP-binding enzyme C-terminal domain GNK04_17495 PF00501 AMP-binding enzyme GNK04_17500 PF01799 [2Fe-2S] binding domain GNK04_17500 PF00111 2Fe-2S iron-sulfur cluster binding domain GNK04_17505 PF00941 FAD binding domain in molybdopterin dehydrogenase GNK04_17505 PF03450 CO dehydrogenase flavoprotein C-terminal domain GNK04_17515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GNK04_17515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GNK04_17525 PF02625 XdhC and CoxI family GNK04_17525 PF13478 XdhC Rossmann domain GNK04_17530 PF10114 Sensory domain found in PocR GNK04_17530 PF12833 Helix-turn-helix domain GNK04_17535 PF00356 Bacterial regulatory proteins, lacI family GNK04_17540 PF01261 Xylose isomerase-like TIM barrel GNK04_17545 PF02653 Branched-chain amino acid transport system / permease component GNK04_17550 PF00005 ABC transporter GNK04_17555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_17555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_17565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_17565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_17570 PF01261 Xylose isomerase-like TIM barrel GNK04_17580 PF07875 Coat F domain GNK04_17590 PF13823 Alcohol dehydrogenase GroES-associated GNK04_17590 PF00107 Zinc-binding dehydrogenase GNK04_17590 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_17595 PF07875 Coat F domain GNK04_17610 PF00248 Aldo/keto reductase family GNK04_17620 PF01965 DJ-1/PfpI family GNK04_17630 PF00296 Luciferase-like monooxygenase GNK04_17655 PF07804 HipA-like C-terminal domain GNK04_17675 PF01695 IstB-like ATP binding protein GNK04_17680 PF00665 Integrase core domain GNK04_17695 PF00589 Phage integrase family GNK04_17695 PF02899 Phage integrase, N-terminal SAM-like domain GNK04_17700 PF02899 Phage integrase, N-terminal SAM-like domain GNK04_17700 PF00589 Phage integrase family GNK04_17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_17715 PF03466 LysR substrate binding domain GNK04_17735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_17740 PF07969 Amidohydrolase family GNK04_17760 PF00892 EamA-like transporter family GNK04_17765 PF00155 Aminotransferase class I and II GNK04_17765 PF00392 Bacterial regulatory proteins, gntR family GNK04_17770 PF00892 EamA-like transporter family GNK04_17775 PF00072 Response regulator receiver domain GNK04_17775 PF00486 Transcriptional regulatory protein, C terminal GNK04_17780 PF00672 HAMP domain GNK04_17780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_17780 PF00512 His Kinase A (phospho-acceptor) domain GNK04_17785 PF02687 FtsX-like permease family GNK04_17790 PF00005 ABC transporter GNK04_17795 PF03358 NADPH-dependent FMN reductase GNK04_17800 PF03358 NADPH-dependent FMN reductase GNK04_17805 PF01738 Dienelactone hydrolase family GNK04_17810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_17815 PF01613 Flavin reductase like domain GNK04_17820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_17825 PF00589 Phage integrase family GNK04_17825 PF14659 Phage integrase, N-terminal SAM-like domain GNK04_17835 PF00194 Eukaryotic-type carbonic anhydrase GNK04_17845 PF02254 TrkA-N domain GNK04_17845 PF07885 Ion channel GNK04_17850 PF08868 YugN-like family GNK04_17855 PF00342 Phosphoglucose isomerase GNK04_17860 PF00465 Iron-containing alcohol dehydrogenase GNK04_17865 PF04070 Domain of unknown function (DUF378) GNK04_17870 PF00575 S1 RNA binding domain GNK04_17875 PF00209 Sodium:neurotransmitter symporter family GNK04_17880 PF08386 TAP-like protein GNK04_17880 PF00561 alpha/beta hydrolase fold GNK04_17895 PF07730 Histidine kinase GNK04_17895 PF00672 HAMP domain GNK04_17895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_17900 PF00072 Response regulator receiver domain GNK04_17900 PF00196 Bacterial regulatory proteins, luxR family GNK04_17915 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_17930 PF05036 Sporulation related domain GNK04_17930 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_17935 PF13426 PAS domain GNK04_17935 PF01740 STAS domain GNK04_17940 PF00174 Oxidoreductase molybdopterin binding domain GNK04_17945 PF03553 Na+/H+ antiporter family GNK04_17945 PF13726 Na+-H+ antiporter family GNK04_17950 PF02681 Divergent PAP2 family GNK04_17960 PF06725 3D domain GNK04_17965 PF14068 Putative membrane protein GNK04_17970 PF00293 NUDIX domain GNK04_17975 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_17980 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_17995 PF01261 Xylose isomerase-like TIM barrel GNK04_18000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_18000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_18005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_18005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_18015 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_18020 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_18025 PF01547 Bacterial extracellular solute-binding protein GNK04_18030 PF00356 Bacterial regulatory proteins, lacI family GNK04_18045 PF01521 Iron-sulphur cluster biosynthesis GNK04_18050 PF01678 Diaminopimelate epimerase GNK04_18060 PF07662 Na+ dependent nucleoside transporter C-terminus GNK04_18060 PF01773 Na+ dependent nucleoside transporter N-terminus GNK04_18065 PF07293 Protein of unknown function (DUF1450) GNK04_18070 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_18080 PF07315 Protein of unknown function (DUF1462) GNK04_18085 PF01106 NifU-like domain GNK04_18095 PF04608 Phosphatidylglycerophosphatase A GNK04_18100 PF13344 Haloacid dehalogenase-like hydrolase GNK04_18105 PF01934 Protein of unknown function DUF86 GNK04_18120 PF06265 Protein of unknown function (DUF1027) GNK04_18125 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNK04_18130 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GNK04_18130 PF04055 Radical SAM superfamily GNK04_18135 PF01551 Peptidase family M23 GNK04_18145 PF00209 Sodium:neurotransmitter symporter family GNK04_18150 PF03553 Na+/H+ antiporter family GNK04_18160 PF09560 Sporulation protein YunB (Spo_YunB) GNK04_18165 PF08827 Domain of unknown function (DUF1805) GNK04_18175 PF01925 Sulfite exporter TauE/SafE GNK04_18180 PF01904 Protein of unknown function DUF72 GNK04_18185 PF01458 Uncharacterized protein family (UPF0051) GNK04_18190 PF01592 NifU-like N terminal domain GNK04_18195 PF00266 Aminotransferase class-V GNK04_18200 PF01458 Uncharacterized protein family (UPF0051) GNK04_18205 PF00005 ABC transporter GNK04_18210 PF02627 Carboxymuconolactone decarboxylase family GNK04_18215 PF00056 lactate/malate dehydrogenase, NAD binding domain GNK04_18215 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNK04_18220 PF03180 NLPA lipoprotein GNK04_18225 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_18230 PF00005 ABC transporter GNK04_18230 PF09383 NIL domain GNK04_18235 PF13291 ACT domain GNK04_18235 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_18240 PF00694 Aconitase C-terminal domain GNK04_18245 PF00330 Aconitase family (aconitate hydratase) GNK04_18250 PF00180 Isocitrate/isopropylmalate dehydrogenase GNK04_18255 PF08502 LeuA allosteric (dimerisation) domain GNK04_18255 PF00682 HMGL-like GNK04_18260 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GNK04_18260 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GNK04_18265 PF01842 ACT domain GNK04_18265 PF10369 Small subunit of acetolactate synthase GNK04_18270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNK04_18270 PF00205 Thiamine pyrophosphate enzyme, central domain GNK04_18270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNK04_18275 PF01063 Amino-transferase class IV GNK04_18280 PF01053 Cys/Met metabolism PLP-dependent enzyme GNK04_18285 PF00561 alpha/beta hydrolase fold GNK04_18300 PF04542 Sigma-70 region 2 GNK04_18310 PF01751 Toprim domain GNK04_18315 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNK04_18330 PF01597 Glycine cleavage H-protein GNK04_18335 PF03960 ArsC family GNK04_18340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_18340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_18340 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_18345 PF00108 Thiolase, N-terminal domain GNK04_18345 PF02803 Thiolase, C-terminal domain GNK04_18350 PF00378 Enoyl-CoA hydratase/isomerase GNK04_18350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNK04_18350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNK04_18355 PF01619 Proline dehydrogenase GNK04_18360 PF10835 Protein of unknown function (DUF2573) GNK04_18370 PF01593 Flavin containing amine oxidoreductase GNK04_18380 PF03006 Haemolysin-III related GNK04_18385 PF00005 ABC transporter GNK04_18395 PF04542 Sigma-70 region 2 GNK04_18395 PF08281 Sigma-70, region 4 GNK04_18405 PF00005 ABC transporter GNK04_18405 PF13732 Domain of unknown function (DUF4162) GNK04_18410 PF07885 Ion channel GNK04_18415 PF07883 Cupin domain GNK04_18425 PF02562 PhoH-like protein GNK04_18425 PF13638 PIN domain GNK04_18440 PF00216 Bacterial DNA-binding protein GNK04_18445 PF03473 MOSC domain GNK04_18445 PF03475 3-alpha domain GNK04_18455 PF00440 Bacterial regulatory proteins, tetR family GNK04_18460 PF13732 Domain of unknown function (DUF4162) GNK04_18460 PF00005 ABC transporter GNK04_18470 PF00293 NUDIX domain GNK04_18545 PF03992 Antibiotic biosynthesis monooxygenase GNK04_18550 PF01709 Transcriptional regulator GNK04_18555 PF03576 Peptidase family S58 GNK04_18565 PF01472 PUA domain GNK04_18565 PF00696 Amino acid kinase family GNK04_18575 PF00268 Ribonucleotide reductase, small chain GNK04_18580 PF00317 Ribonucleotide reductase, all-alpha domain GNK04_18580 PF03477 ATP cone domain GNK04_18580 PF02867 Ribonucleotide reductase, barrel domain GNK04_18585 PF00512 His Kinase A (phospho-acceptor) domain GNK04_18585 PF18719 ArlS sensor domain GNK04_18585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_18590 PF00072 Response regulator receiver domain GNK04_18590 PF00486 Transcriptional regulatory protein, C terminal GNK04_18600 PF00924 Mechanosensitive ion channel GNK04_18600 PF12795 Mechanosensitive ion channel porin domain GNK04_18600 PF12794 Mechanosensitive ion channel inner membrane domain 1 GNK04_18610 PF12679 ABC-2 family transporter protein GNK04_18615 PF00005 ABC transporter GNK04_18620 PF00005 ABC transporter GNK04_18625 PF00392 Bacterial regulatory proteins, gntR family GNK04_18640 PF01235 Sodium:alanine symporter family GNK04_18645 PF13460 NAD(P)H-binding GNK04_18650 PF00990 Diguanylate cyclase, GGDEF domain GNK04_18650 PF17151 Periplasmic sensor domain GNK04_18655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNK04_18660 PF02681 Divergent PAP2 family GNK04_18670 PF01713 Smr domain GNK04_18670 PF00488 MutS domain V GNK04_18680 PF01235 Sodium:alanine symporter family GNK04_18685 PF00005 ABC transporter GNK04_18685 PF00664 ABC transporter transmembrane region GNK04_18690 PF00881 Nitroreductase family GNK04_18710 PF00296 Luciferase-like monooxygenase GNK04_18715 PF08220 DeoR-like helix-turn-helix domain GNK04_18715 PF00455 DeoR C terminal sensor domain GNK04_18720 PF01842 ACT domain GNK04_18720 PF00551 Formyl transferase GNK04_18725 PF09680 Family of unknown function GNK04_18735 PF03358 NADPH-dependent FMN reductase GNK04_18735 PF01566 Natural resistance-associated macrophage protein GNK04_18745 PF09335 SNARE associated Golgi protein GNK04_18750 PF00571 CBS domain GNK04_18750 PF01595 Cyclin M transmembrane N-terminal domain GNK04_18750 PF03471 Transporter associated domain GNK04_18755 PF01925 Sulfite exporter TauE/SafE GNK04_18760 PF01206 Sulfurtransferase TusA GNK04_18765 PF00581 Rhodanese-like domain GNK04_18765 PF00753 Metallo-beta-lactamase superfamily GNK04_18770 PF00581 Rhodanese-like domain GNK04_18770 PF01206 Sulfurtransferase TusA GNK04_18785 PF13686 DsrE/DsrF/DrsH-like family GNK04_18790 PF02583 Metal-sensitive transcriptional repressor GNK04_18795 PF02656 Domain of unknown function (DUF202) GNK04_18800 PF01641 SelR domain GNK04_18800 PF01625 Peptide methionine sulfoxide reductase GNK04_18805 PF01638 HxlR-like helix-turn-helix GNK04_18810 PF01757 Acyltransferase family GNK04_18815 PF02554 Carbon starvation protein CstA GNK04_18820 PF00881 Nitroreductase family GNK04_18825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_18825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_18830 PF04607 Region found in RelA / SpoT proteins GNK04_18835 PF02667 Short chain fatty acid transporter GNK04_18840 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GNK04_18840 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GNK04_18865 PF00920 Dehydratase family GNK04_18870 PF07561 Domain of Unknown Function (DUF1540) GNK04_18890 PF03466 LysR substrate binding domain GNK04_18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNK04_18910 PF01668 SmpB protein GNK04_18915 PF00575 S1 RNA binding domain GNK04_18915 PF00773 RNB domain GNK04_18915 PF08206 Ribonuclease B OB domain GNK04_18915 PF17876 Cold shock domain GNK04_18920 PF12146 Serine aminopeptidase, S33 GNK04_18925 PF03840 Preprotein translocase SecG subunit GNK04_18930 PF03952 Enolase, N-terminal domain GNK04_18930 PF00113 Enolase, C-terminal TIM barrel domain GNK04_18935 PF01676 Metalloenzyme superfamily GNK04_18935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GNK04_18940 PF00121 Triosephosphate isomerase GNK04_18945 PF00162 Phosphoglycerate kinase GNK04_18950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNK04_18950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNK04_18955 PF04198 Putative sugar-binding domain GNK04_18965 PF04552 Sigma-54, DNA binding domain GNK04_18965 PF04963 Sigma-54 factor, core binding domain GNK04_18965 PF00309 Sigma-54 factor, Activator interacting domain (AID) GNK04_18985 PF00574 Clp protease GNK04_18990 PF00381 PTS HPr component phosphorylation site GNK04_18995 PF14527 WhiA LAGLIDADG-like domain GNK04_18995 PF10298 WhiA N-terminal LAGLIDADG-like domain GNK04_18995 PF02650 WhiA C-terminal HTH domain GNK04_19000 PF01933 Uncharacterised protein family UPF0052 GNK04_19005 PF03668 P-loop ATPase protein family GNK04_19010 PF00293 NUDIX domain GNK04_19015 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_19025 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GNK04_19025 PF01502 Phosphoribosyl-AMP cyclohydrolase GNK04_19030 PF00977 Histidine biosynthesis protein GNK04_19035 PF00977 Histidine biosynthesis protein GNK04_19040 PF00117 Glutamine amidotransferase class-I GNK04_19045 PF00475 Imidazoleglycerol-phosphate dehydratase GNK04_19050 PF00815 Histidinol dehydrogenase GNK04_19055 PF01634 ATP phosphoribosyltransferase GNK04_19060 PF13393 Histidyl-tRNA synthetase GNK04_19065 PF01699 Sodium/calcium exchanger protein GNK04_19070 PF00557 Metallopeptidase family M24 GNK04_19075 PF14602 Hexapeptide repeat of succinyl-transferase GNK04_19085 PF07670 Nucleoside recognition GNK04_19090 PF01790 Prolipoprotein diacylglyceryl transferase GNK04_19100 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GNK04_19100 PF01266 FAD dependent oxidoreductase GNK04_19105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNK04_19105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNK04_19110 PF00230 Major intrinsic protein GNK04_19115 PF04309 Glycerol-3-phosphate responsive antiterminator GNK04_19120 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GNK04_19125 PF13349 Putative adhesin GNK04_19135 PF17755 UvrA DNA-binding domain GNK04_19135 PF17760 UvrA interaction domain GNK04_19140 PF02151 UvrB/uvrC motif GNK04_19140 PF12344 Ultra-violet resistance protein B GNK04_19140 PF04851 Type III restriction enzyme, res subunit GNK04_19140 PF17757 UvrB interaction domain GNK04_19140 PF00271 Helicase conserved C-terminal domain GNK04_19155 PF03061 Thioesterase superfamily GNK04_19165 PF17820 PDZ domain GNK04_19170 PF01471 Putative peptidoglycan binding domain GNK04_19170 PF03572 Peptidase family S41 GNK04_19170 PF17820 PDZ domain GNK04_19175 PF01551 Peptidase family M23 GNK04_19175 PF04225 Opacity-associated protein A LysM-like domain GNK04_19180 PF18075 FtsX extracellular domain GNK04_19180 PF02687 FtsX-like permease family GNK04_19185 PF00005 ABC transporter GNK04_19190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNK04_19195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_19195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_19205 PF07516 SecA Wing and Scaffold domain GNK04_19205 PF01043 SecA preprotein cross-linking domain GNK04_19205 PF07517 SecA DEAD-like domain GNK04_19205 PF02810 SEC-C motif GNK04_19210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GNK04_19210 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GNK04_19215 PF00313 'Cold-shock' DNA-binding domain GNK04_19225 PF00271 Helicase conserved C-terminal domain GNK04_19225 PF04851 Type III restriction enzyme, res subunit GNK04_19230 PF02645 Uncharacterised protein, DegV family COG1307 GNK04_19235 PF01476 LysM domain GNK04_19235 PF00877 NlpC/P60 family GNK04_19240 PF00196 Bacterial regulatory proteins, luxR family GNK04_19240 PF00072 Response regulator receiver domain GNK04_19245 PF05384 Sensor protein DegS GNK04_19245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_19245 PF07730 Histidine kinase GNK04_19250 PF09186 Domain of unknown function (DUF1949) GNK04_19250 PF01205 Uncharacterized protein family UPF0029 GNK04_19255 PF00953 Glycosyl transferase family 4 GNK04_19260 PF03816 Cell envelope-related transcriptional attenuator domain GNK04_19275 PF00534 Glycosyl transferases group 1 GNK04_19275 PF13439 Glycosyltransferase Family 4 GNK04_19290 PF03033 Glycosyltransferase family 28 N-terminal domain GNK04_19290 PF04101 Glycosyltransferase family 28 C-terminal domain GNK04_19295 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNK04_19295 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNK04_19295 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNK04_19300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNK04_19300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNK04_19300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNK04_19310 PF00005 ABC transporter GNK04_19325 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_19330 PF02350 UDP-N-acetylglucosamine 2-epimerase GNK04_19340 PF04122 Putative cell wall binding repeat 2 GNK04_19340 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_19345 PF00082 Subtilase family GNK04_19355 PF18801 response regulator aspartate phosphatase H, N terminal GNK04_19370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_19370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_19380 PF04122 Putative cell wall binding repeat 2 GNK04_19380 PF08486 Stage II sporulation protein GNK04_19405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNK04_19405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNK04_19405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNK04_19415 PF07849 Protein of unknown function (DUF1641) GNK04_19420 PF01568 Molydopterin dinucleotide binding domain GNK04_19420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNK04_19420 PF12838 4Fe-4S dicluster domain GNK04_19420 PF00384 Molybdopterin oxidoreductase GNK04_19420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GNK04_19435 PF14403 Circularly permuted ATP-grasp type 2 GNK04_19440 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_19445 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_19460 PF00364 Biotin-requiring enzyme GNK04_19460 PF00561 alpha/beta hydrolase fold GNK04_19465 PF12833 Helix-turn-helix domain GNK04_19465 PF01497 Periplasmic binding protein GNK04_19470 PF02743 Cache domain GNK04_19470 PF06580 Histidine kinase GNK04_19470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_19470 PF00672 HAMP domain GNK04_19485 PF00005 ABC transporter GNK04_19485 PF00664 ABC transporter transmembrane region GNK04_19490 PF00664 ABC transporter transmembrane region GNK04_19490 PF00005 ABC transporter GNK04_19495 PF01238 Phosphomannose isomerase type I GNK04_19500 PF00480 ROK family GNK04_19505 PF17248 Family of unknown function (DUF5317) GNK04_19510 PF01966 HD domain GNK04_19520 PF01470 Pyroglutamyl peptidase GNK04_19525 PF00465 Iron-containing alcohol dehydrogenase GNK04_19540 PF00171 Aldehyde dehydrogenase family GNK04_19545 PF01116 Fructose-bisphosphate aldolase class-II GNK04_19550 PF00392 Bacterial regulatory proteins, gntR family GNK04_19555 PF00365 Phosphofructokinase GNK04_19565 PF01055 Glycosyl hydrolases family 31 GNK04_19570 PF00474 Sodium:solute symporter family GNK04_19600 PF16363 GDP-mannose 4,6 dehydratase GNK04_19605 PF08533 Beta-galactosidase C-terminal domain GNK04_19605 PF02449 Beta-galactosidase GNK04_19605 PF08532 Beta-galactosidase trimerisation domain GNK04_19610 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GNK04_19610 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GNK04_19615 PF00288 GHMP kinases N terminal domain GNK04_19615 PF08544 GHMP kinases C terminal GNK04_19615 PF10509 Galactokinase galactose-binding signature GNK04_19620 PF00356 Bacterial regulatory proteins, lacI family GNK04_19625 PF16875 Glycosyl hydrolase family 36 N-terminal domain GNK04_19625 PF16874 Glycosyl hydrolase family 36 C-terminal domain GNK04_19630 PF01301 Glycosyl hydrolases family 35 GNK04_19635 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_19640 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_19645 PF13416 Bacterial extracellular solute-binding protein GNK04_19650 PF13416 Bacterial extracellular solute-binding protein GNK04_19655 PF03062 MBOAT, membrane-bound O-acyltransferase family GNK04_19665 PF01209 ubiE/COQ5 methyltransferase family GNK04_19670 PF16363 GDP-mannose 4,6 dehydratase GNK04_19675 PF00005 ABC transporter GNK04_19675 PF08239 Bacterial SH3 domain GNK04_19680 PF01061 ABC-2 type transporter GNK04_19685 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNK04_19690 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNK04_19690 PF00535 Glycosyl transferase family 2 GNK04_19695 PF01467 Cytidylyltransferase-like GNK04_19710 PF00483 Nucleotidyl transferase GNK04_19735 PF00375 Sodium:dicarboxylate symporter family GNK04_19740 PF00465 Iron-containing alcohol dehydrogenase GNK04_19745 PF01070 FMN-dependent dehydrogenase GNK04_19750 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_19755 PF00005 ABC transporter GNK04_19755 PF09383 NIL domain GNK04_19760 PF03180 NLPA lipoprotein GNK04_19765 PF07676 WD40-like Beta Propeller Repeat GNK04_19765 PF00326 Prolyl oligopeptidase family GNK04_19775 PF01380 SIS domain GNK04_19785 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_19790 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_19795 PF01547 Bacterial extracellular solute-binding protein GNK04_19805 PF01418 Helix-turn-helix domain, rpiR family GNK04_19805 PF01380 SIS domain GNK04_19810 PF13580 SIS domain GNK04_19820 PF00367 phosphotransferase system, EIIB GNK04_19820 PF02378 Phosphotransferase system, EIIC GNK04_19825 PF07075 Protein of unknown function (DUF1343) GNK04_19830 PF00933 Glycosyl hydrolase family 3 N terminal domain GNK04_19830 PF01915 Glycosyl hydrolase family 3 C-terminal domain GNK04_19835 PF00144 Beta-lactamase GNK04_19840 PF03401 Tripartite tricarboxylate transporter family receptor GNK04_19850 PF01970 Tripartite tricarboxylate transporter TctA family GNK04_19855 PF00072 Response regulator receiver domain GNK04_19855 PF08279 HTH domain GNK04_19855 PF12431 Transcriptional regulator GNK04_19860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_19860 PF00989 PAS fold GNK04_19860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNK04_19860 PF17203 Single cache domain 3 GNK04_19865 PF01156 Inosine-uridine preferring nucleoside hydrolase GNK04_19870 PF00144 Beta-lactamase GNK04_19875 PF01676 Metalloenzyme superfamily GNK04_19880 PF01168 Alanine racemase, N-terminal domain GNK04_19885 PF00155 Aminotransferase class I and II GNK04_19890 PF02126 Phosphotriesterase family GNK04_19895 PF10797 Protein of unknown function GNK04_19900 PF10941 Protein of unknown function DUF2620 GNK04_19910 PF14503 YhfZ C-terminal domain GNK04_19910 PF14502 Helix-turn-helix domain GNK04_19915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNK04_19925 PF03480 Bacterial extracellular solute-binding protein, family 7 GNK04_19935 PF01380 SIS domain GNK04_19940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GNK04_19945 PF00294 pfkB family carbohydrate kinase GNK04_19950 PF00356 Bacterial regulatory proteins, lacI family GNK04_19960 PF03009 Glycerophosphoryl diester phosphodiesterase family GNK04_19980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNK04_19980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNK04_19985 PF03061 Thioesterase superfamily GNK04_19990 PF07687 Peptidase dimerisation domain GNK04_19990 PF01546 Peptidase family M20/M25/M40 GNK04_20000 PF02225 PA domain GNK04_20000 PF04389 Peptidase family M28 GNK04_20005 PF00474 Sodium:solute symporter family GNK04_20025 PF02308 MgtC family GNK04_20030 PF02308 MgtC family GNK04_20035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNK04_20035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNK04_20050 PF13537 Glutamine amidotransferase domain GNK04_20050 PF00733 Asparagine synthase GNK04_20055 PF00854 POT family GNK04_20060 PF00365 Phosphofructokinase GNK04_20070 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_20085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_20095 PF13520 Amino acid permease GNK04_20100 PF00202 Aminotransferase class-III GNK04_20105 PF00392 Bacterial regulatory proteins, gntR family GNK04_20105 PF07729 FCD domain GNK04_20110 PF02417 Chromate transporter GNK04_20115 PF02417 Chromate transporter GNK04_20125 PF01266 FAD dependent oxidoreductase GNK04_20130 PF04199 Putative cyclase GNK04_20135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNK04_20135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNK04_20140 PF01261 Xylose isomerase-like TIM barrel GNK04_20145 PF04854 Protein of unknown function, DUF624 GNK04_20150 PF00083 Sugar (and other) transporter GNK04_20155 PF03512 Glycosyl hydrolase family 52 GNK04_20160 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20165 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20170 PF01547 Bacterial extracellular solute-binding protein GNK04_20175 PF00480 ROK family GNK04_20180 PF01263 Aldose 1-epimerase GNK04_20190 PF05504 Spore germination B3/ GerAC like, C-terminal GNK04_20195 PF03323 Bacillus/Clostridium GerA spore germination protein GNK04_20200 PF03845 Spore germination protein GNK04_20205 PF03845 Spore germination protein GNK04_20210 PF00561 alpha/beta hydrolase fold GNK04_20215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_20215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_20220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_20220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_20225 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20230 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20235 PF01547 Bacterial extracellular solute-binding protein GNK04_20245 PF00356 Bacterial regulatory proteins, lacI family GNK04_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_20270 PF13188 PAS domain GNK04_20270 PF00989 PAS fold GNK04_20270 PF00512 His Kinase A (phospho-acceptor) domain GNK04_20270 PF13426 PAS domain GNK04_20285 PF04542 Sigma-70 region 2 GNK04_20285 PF08281 Sigma-70, region 4 GNK04_20290 PF01476 LysM domain GNK04_20290 PF00877 NlpC/P60 family GNK04_20295 PF00128 Alpha amylase, catalytic domain GNK04_20295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNK04_20295 PF03714 Bacterial pullanase-associated domain GNK04_20300 PF04122 Putative cell wall binding repeat 2 GNK04_20300 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_20320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNK04_20320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNK04_20325 PF01565 FAD binding domain GNK04_20325 PF02913 FAD linked oxidases, C-terminal domain GNK04_20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_20345 PF00512 His Kinase A (phospho-acceptor) domain GNK04_20365 PF00083 Sugar (and other) transporter GNK04_20365 PF07690 Major Facilitator Superfamily GNK04_20385 PF00005 ABC transporter GNK04_20390 PF02687 FtsX-like permease family GNK04_20390 PF12704 MacB-like periplasmic core domain GNK04_20430 PF00005 ABC transporter GNK04_20445 PF00072 Response regulator receiver domain GNK04_20445 PF04397 LytTr DNA-binding domain GNK04_20460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNK04_20460 PF00929 Exonuclease GNK04_20460 PF02811 PHP domain GNK04_20460 PF14579 Helix-hairpin-helix motif GNK04_20460 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNK04_20470 PF00909 Ammonium Transporter Family GNK04_20475 PF07969 Amidohydrolase family GNK04_20480 PF10710 Protein of unknown function (DUF2512) GNK04_20510 PF00665 Integrase core domain GNK04_20515 PF01695 IstB-like ATP binding protein GNK04_20530 PF05638 Type VI secretion system effector, Hcp GNK04_20535 PF14449 Pre-toxin TG GNK04_20535 PF14431 YwqJ-like deaminase GNK04_20535 PF04740 LXG domain of WXG superfamily GNK04_20550 PF01039 Carboxyl transferase domain GNK04_20555 PF00501 AMP-binding enzyme GNK04_20555 PF13193 AMP-binding enzyme C-terminal domain GNK04_20570 PF00474 Sodium:solute symporter family GNK04_20580 PF01717 Cobalamin-independent synthase, Catalytic domain GNK04_20600 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20605 PF01547 Bacterial extracellular solute-binding protein GNK04_20610 PF00356 Bacterial regulatory proteins, lacI family GNK04_20615 PF00483 Nucleotidyl transferase GNK04_20630 PF00534 Glycosyl transferases group 1 GNK04_20635 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNK04_20640 PF01467 Cytidylyltransferase-like GNK04_20655 PF12708 Pectate lyase superfamily protein GNK04_20655 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) GNK04_20655 PF08548 Peptidase M10 serralysin C terminal GNK04_20660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNK04_20660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNK04_20660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNK04_20665 PF01370 NAD dependent epimerase/dehydratase family GNK04_20675 PF01381 Helix-turn-helix GNK04_20675 PF08671 Anti-repressor SinI GNK04_20685 PF02719 Polysaccharide biosynthesis protein GNK04_20690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNK04_20695 PF02397 Bacterial sugar transferase GNK04_20700 PF00534 Glycosyl transferases group 1 GNK04_20740 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20745 PF00528 Binding-protein-dependent transport system inner membrane component GNK04_20755 PF01116 Fructose-bisphosphate aldolase class-II GNK04_20760 PF08220 DeoR-like helix-turn-helix domain GNK04_20760 PF00455 DeoR C terminal sensor domain GNK04_20765 PF01116 Fructose-bisphosphate aldolase class-II GNK04_20770 PF07385 D-lyxose isomerase GNK04_20775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNK04_20775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNK04_20785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNK04_20795 PF03480 Bacterial extracellular solute-binding protein, family 7 GNK04_20805 PF08240 Alcohol dehydrogenase GroES-like domain GNK04_20805 PF00107 Zinc-binding dehydrogenase GNK04_20830 PF00534 Glycosyl transferases group 1 GNK04_20850 PF01370 NAD dependent epimerase/dehydratase family GNK04_20855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNK04_20855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNK04_20855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNK04_20860 PF13477 Glycosyl transferase 4-like GNK04_20860 PF00534 Glycosyl transferases group 1 GNK04_20870 PF02397 Bacterial sugar transferase GNK04_20875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNK04_20880 PF02719 Polysaccharide biosynthesis protein GNK04_20890 PF13614 AAA domain GNK04_20895 PF02706 Chain length determinant protein GNK04_20895 PF13807 G-rich domain on putative tyrosine kinase GNK04_20905 PF03816 Cell envelope-related transcriptional attenuator domain GNK04_20915 PF16363 GDP-mannose 4,6 dehydratase GNK04_20920 PF01370 NAD dependent epimerase/dehydratase family GNK04_20925 PF01842 ACT domain GNK04_20925 PF00742 Homoserine dehydrogenase GNK04_20925 PF03447 Homoserine dehydrogenase, NAD binding domain GNK04_20955 PF12708 Pectate lyase superfamily protein GNK04_20955 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) GNK04_20955 PF08548 Peptidase M10 serralysin C terminal GNK04_20965 PF04321 RmlD substrate binding domain GNK04_20970 PF16363 GDP-mannose 4,6 dehydratase GNK04_20975 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GNK04_20980 PF00483 Nucleotidyl transferase GNK04_20985 PF02397 Bacterial sugar transferase GNK04_20990 PF00483 Nucleotidyl transferase GNK04_20990 PF01050 Mannose-6-phosphate isomerase GNK04_20995 PF13614 AAA domain GNK04_21000 PF02706 Chain length determinant protein GNK04_21000 PF13807 G-rich domain on putative tyrosine kinase GNK04_21015 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_21035 PF01471 Putative peptidoglycan binding domain GNK04_21035 PF07486 Cell Wall Hydrolase GNK04_21050 PF00356 Bacterial regulatory proteins, lacI family GNK04_21055 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_21055 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_21060 PF00367 phosphotransferase system, EIIB GNK04_21060 PF02378 Phosphotransferase system, EIIC GNK04_21080 PF01923 Cobalamin adenosyltransferase GNK04_21095 PF02654 Cobalamin-5-phosphate synthase GNK04_21100 PF07685 CobB/CobQ-like glutamine amidotransferase domain GNK04_21105 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GNK04_21110 PF00155 Aminotransferase class I and II GNK04_21115 PF03186 CobD/Cbib protein GNK04_21120 PF00005 ABC transporter GNK04_21125 PF01032 FecCD transport family GNK04_21130 PF01497 Periplasmic binding protein GNK04_21135 PF12704 MacB-like periplasmic core domain GNK04_21135 PF00005 ABC transporter GNK04_21135 PF02687 FtsX-like permease family GNK04_21140 PF12704 MacB-like periplasmic core domain GNK04_21140 PF00005 ABC transporter GNK04_21140 PF02687 FtsX-like permease family GNK04_21145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_21145 PF00672 HAMP domain GNK04_21145 PF00512 His Kinase A (phospho-acceptor) domain GNK04_21150 PF00072 Response regulator receiver domain GNK04_21150 PF00486 Transcriptional regulatory protein, C terminal GNK04_21155 PF02915 Rubrerythrin GNK04_21165 PF07681 DoxX GNK04_21180 PF01747 ATP-sulfurylase GNK04_21180 PF14306 PUA-like domain GNK04_21185 PF03600 Citrate transporter GNK04_21185 PF02080 TrkA-C domain GNK04_21200 PF00741 Gas vesicle protein GNK04_21215 PF00741 Gas vesicle protein GNK04_21225 PF07728 AAA domain (dynein-related subfamily) GNK04_21245 PF00741 Gas vesicle protein GNK04_21250 PF05121 Gas vesicle protein K GNK04_21250 PF00741 Gas vesicle protein GNK04_21255 PF00741 Gas vesicle protein GNK04_21275 PF09154 Domain of unknown function (DUF1939) GNK04_21275 PF00128 Alpha amylase, catalytic domain GNK04_21290 PF00291 Pyridoxal-phosphate dependent enzyme GNK04_21295 PF08486 Stage II sporulation protein GNK04_21295 PF04122 Putative cell wall binding repeat 2 GNK04_21300 PF00877 NlpC/P60 family GNK04_21300 PF01476 LysM domain GNK04_21305 PF08486 Stage II sporulation protein GNK04_21305 PF04122 Putative cell wall binding repeat 2 GNK04_21310 PF04122 Putative cell wall binding repeat 2 GNK04_21310 PF01520 N-acetylmuramoyl-L-alanine amidase GNK04_21315 PF00149 Calcineurin-like phosphoesterase GNK04_21315 PF02872 5'-nucleotidase, C-terminal domain GNK04_21320 PF08486 Stage II sporulation protein GNK04_21320 PF04122 Putative cell wall binding repeat 2 GNK04_21325 PF18255 DNA processing protein A sterile alpha motif domain GNK04_21325 PF02481 DNA recombination-mediator protein A GNK04_21340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_21355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GNK04_21360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GNK04_21365 PF03480 Bacterial extracellular solute-binding protein, family 7 GNK04_21370 PF00392 Bacterial regulatory proteins, gntR family GNK04_21370 PF07729 FCD domain GNK04_21380 PF01381 Helix-turn-helix GNK04_21380 PF08671 Anti-repressor SinI GNK04_21385 PF08671 Anti-repressor SinI GNK04_21385 PF01381 Helix-turn-helix GNK04_21400 PF01381 Helix-turn-helix GNK04_21400 PF08671 Anti-repressor SinI GNK04_21410 PF07977 FabA-like domain GNK04_21425 PF12116 Stage III sporulation protein D GNK04_21430 PF00474 Sodium:solute symporter family GNK04_21445 PF01551 Peptidase family M23 GNK04_21455 PF08486 Stage II sporulation protein GNK04_21460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNK04_21470 PF06612 Protein of unknown function (DUF1146) GNK04_21475 PF00361 Proton-conducting membrane transporter GNK04_21480 PF00361 Proton-conducting membrane transporter GNK04_21485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GNK04_21485 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus GNK04_21485 PF00361 Proton-conducting membrane transporter GNK04_21490 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GNK04_21495 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GNK04_21500 PF00037 4Fe-4S binding domain GNK04_21505 PF00146 NADH dehydrogenase GNK04_21510 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GNK04_21515 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GNK04_21520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GNK04_21525 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GNK04_21540 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GNK04_21540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GNK04_21550 PF00231 ATP synthase GNK04_21555 PF00306 ATP synthase alpha/beta chain, C terminal domain GNK04_21555 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNK04_21555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNK04_21560 PF00213 ATP synthase delta (OSCP) subunit GNK04_21565 PF00430 ATP synthase B/B' CF(0) GNK04_21570 PF00137 ATP synthase subunit C GNK04_21575 PF00119 ATP synthase A chain GNK04_21580 PF03899 ATP synthase I chain GNK04_21595 PF00464 Serine hydroxymethyltransferase GNK04_21600 PF04260 Protein of unknown function (DUF436) GNK04_21605 PF02502 Ribose/Galactose Isomerase GNK04_21610 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNK04_21615 PF01145 SPFH domain / Band 7 family GNK04_21625 PF02659 Putative manganese efflux pump GNK04_21630 PF10752 Protein of unknown function (DUF2533) GNK04_21635 PF03481 Putative GTP-binding controlling metal-binding GNK04_21635 PF01300 Telomere recombination GNK04_21645 PF09551 Stage II sporulation protein R (spore_II_R) GNK04_21650 PF17827 PrmC N-terminal domain GNK04_21650 PF13847 Methyltransferase domain GNK04_21655 PF03462 PCRF domain GNK04_21655 PF00472 RF-1 domain GNK04_21660 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNK04_21660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNK04_21670 PF00265 Thymidine kinase GNK04_21675 PF01197 Ribosomal protein L31 GNK04_21680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNK04_21680 PF07498 Rho termination factor, N-terminal domain GNK04_21680 PF07497 Rho termination factor, RNA-binding domain GNK04_21685 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GNK04_21690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNK04_21695 PF00923 Transaldolase/Fructose-6-phosphate aldolase GNK04_21700 PF01116 Fructose-bisphosphate aldolase class-II GNK04_21705 PF00072 Response regulator receiver domain GNK04_21715 PF06418 CTP synthase N-terminus GNK04_21715 PF00117 Glutamine amidotransferase class-I GNK04_21720 PF05066 HB1, ASXL, restriction endonuclease HTH domain GNK04_21725 PF02310 B12 binding domain GNK04_21725 PF01642 Methylmalonyl-CoA mutase GNK04_21730 PF00440 Bacterial regulatory proteins, tetR family GNK04_21730 PF17922 Tetracyclin repressor-like, C-terminal domain GNK04_21740 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_21740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_21740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_21745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNK04_21745 PF02770 Acyl-CoA dehydrogenase, middle domain GNK04_21745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNK04_21750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNK04_21750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNK04_21755 PF02803 Thiolase, C-terminal domain GNK04_21755 PF00108 Thiolase, N-terminal domain GNK04_21760 PF02754 Cysteine-rich domain GNK04_21760 PF13183 4Fe-4S dicluster domain GNK04_21765 PF13091 PLD-like domain GNK04_21770 PF03851 UV-endonuclease UvdE GNK04_21775 PF00561 alpha/beta hydrolase fold GNK04_21785 PF05746 DALR anticodon binding domain GNK04_21785 PF00750 tRNA synthetases class I (R) GNK04_21785 PF03485 Arginyl tRNA synthetase N terminal domain GNK04_21795 PF00491 Arginase family GNK04_21800 PF17284 Spermidine synthase tetramerisation domain GNK04_21805 PF02673 Bacitracin resistance protein BacA GNK04_21810 PF00905 Penicillin binding protein transpeptidase domain GNK04_21810 PF00912 Transglycosylase GNK04_21820 PF08741 YwhD family GNK04_21825 PF00860 Permease family GNK04_21830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNK04_21830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_21845 PF01966 HD domain GNK04_21850 PF00375 Sodium:dicarboxylate symporter family GNK04_21855 PF03099 Biotin/lipoate A/B protein ligase family GNK04_21860 PF01515 Phosphate acetyl/butaryl transferase GNK04_21870 PF09671 Spore coat protein (Spore_GerQ) GNK04_21875 PF04241 Protein of unknown function (DUF423) GNK04_21880 PF05975 Bacterial ABC transporter protein EcsB GNK04_21885 PF00005 ABC transporter GNK04_21905 PF03885 Protein of unknown function (DUF327) GNK04_21915 PF04542 Sigma-70 region 2 GNK04_21915 PF04545 Sigma-70, region 4 GNK04_21915 PF04539 Sigma-70 region 3 GNK04_21920 PF10609 NUBPL iron-transfer P-loop NTPase GNK04_21925 PF00448 SRP54-type protein, GTPase domain GNK04_21930 PF00771 FHIPEP family GNK04_21935 PF01312 FlhB HrpN YscU SpaS Family GNK04_21940 PF01311 Bacterial export proteins, family 1 GNK04_21945 PF01313 Bacterial export proteins, family 3 GNK04_21950 PF00813 FliP family GNK04_21955 PF04347 Flagellar biosynthesis protein, FliO GNK04_21960 PF04509 CheC-like family GNK04_21960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNK04_21965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNK04_21965 PF02154 Flagellar motor switch protein FliM GNK04_21975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNK04_21975 PF00460 Flagella basal body rod protein GNK04_21985 PF03963 Flagellar hook capping protein - N-terminal region GNK04_22005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNK04_22005 PF18269 T3SS EscN ATPase C-terminal domain GNK04_22005 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNK04_22015 PF14841 FliG middle domain GNK04_22015 PF14842 FliG N-terminal domain GNK04_22015 PF01706 FliG C-terminal domain GNK04_22020 PF01514 Secretory protein of YscJ/FliF family GNK04_22020 PF08345 Flagellar M-ring protein C-terminal GNK04_22025 PF02049 Flagellar hook-basal body complex protein FliE GNK04_22030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNK04_22030 PF00460 Flagella basal body rod protein GNK04_22035 PF00460 Flagella basal body rod protein GNK04_22040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNK04_22040 PF00460 Flagella basal body rod protein GNK04_22045 PF00460 Flagella basal body rod protein GNK04_22045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNK04_22050 PF00669 Bacterial flagellin N-terminal helical region GNK04_22055 PF00460 Flagella basal body rod protein GNK04_22055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNK04_22075 PF13677 Membrane MotB of proton-channel complex MotA/MotB GNK04_22075 PF00691 OmpA family GNK04_22080 PF01618 MotA/TolQ/ExbB proton channel family GNK04_22085 PF02561 Flagellar protein FliS GNK04_22095 PF02465 Flagellar hook-associated protein 2 N-terminus GNK04_22095 PF07195 Flagellar hook-associated protein 2 C-terminus GNK04_22100 PF03646 FlaG protein GNK04_22105 PF00700 Bacterial flagellin C-terminal helical region GNK04_22105 PF00669 Bacterial flagellin N-terminal helical region GNK04_22115 PF02599 Global regulator protein family GNK04_22120 PF02623 FliW protein GNK04_22125 PF02682 Carboxyltransferase domain, subdomain C and D GNK04_22130 PF03746 LamB/YcsF family GNK04_22135 PF02626 Carboxyltransferase domain, subdomain A and B GNK04_22145 PF00171 Aldehyde dehydrogenase family GNK04_22160 PF00484 Carbonic anhydrase GNK04_22165 PF01965 DJ-1/PfpI family GNK04_22170 PF03741 Integral membrane protein TerC family GNK04_22180 PF11181 Heat induced stress protein YflT GNK04_22190 PF00206 Lyase GNK04_22190 PF10415 Fumarase C C-terminus GNK04_22205 PF16868 NMT1-like family GNK04_22215 PF06081 Aromatic acid exporter family member 1 GNK04_22230 PF00255 Glutathione peroxidase GNK04_22245 PF01425 Amidase GNK04_22250 PF00892 EamA-like transporter family GNK04_22260 PF00005 ABC transporter GNK04_22265 PF01032 FecCD transport family GNK04_22270 PF01032 FecCD transport family GNK04_22275 PF01497 Periplasmic binding protein GNK04_22285 PF11700 Vacuole effluxer Atg22 like GNK04_22295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNK04_22295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNK04_22305 PF03358 NADPH-dependent FMN reductase GNK04_22310 PF01047 MarR family GNK04_22315 PF01047 MarR family GNK04_22320 PF02566 OsmC-like protein GNK04_22325 PF16123 Hydroxyacylglutathione hydrolase C-terminus GNK04_22325 PF00753 Metallo-beta-lactamase superfamily GNK04_22330 PF00990 Diguanylate cyclase, GGDEF domain GNK04_22335 PF01593 Flavin containing amine oxidoreductase GNK04_22340 PF01641 SelR domain GNK04_22340 PF01625 Peptide methionine sulfoxide reductase GNK04_22345 PF02073 Thermophilic metalloprotease (M29) GNK04_22355 PF11849 Domain of unknown function (DUF3369) GNK04_22360 PF10720 Protein of unknown function (DUF2515) GNK04_22375 PF00375 Sodium:dicarboxylate symporter family GNK04_22395 PF08279 HTH domain GNK04_22395 PF05043 Mga helix-turn-helix domain GNK04_22395 PF00874 PRD domain GNK04_22395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNK04_22405 PF03611 PTS system sugar-specific permease component GNK04_22420 PF00171 Aldehyde dehydrogenase family GNK04_22425 PF00106 short chain dehydrogenase GNK04_22430 PF02574 Homocysteine S-methyltransferase GNK04_22435 PF00324 Amino acid permease GNK04_22480 PF17368 Spore morphogenesis and germination YwcE GNK04_22485 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GNK04_22490 PF00510 Cytochrome c oxidase subunit III GNK04_22495 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNK04_22500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GNK04_22500 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GNK04_22505 PF08244 Glycosyl hydrolases family 32 C terminal GNK04_22505 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNK04_22510 PF00367 phosphotransferase system, EIIB GNK04_22510 PF02378 Phosphotransferase system, EIIC GNK04_22515 PF00356 Bacterial regulatory proteins, lacI family GNK04_22520 PF07690 Major Facilitator Superfamily GNK04_22535 PF01751 Toprim domain GNK04_22535 PF01131 DNA topoisomerase GNK04_22540 PF11871 Domain of unknown function (DUF3391) GNK04_22540 PF01966 HD domain GNK04_22550 PF00128 Alpha amylase, catalytic domain GNK04_22550 PF16657 Maltogenic Amylase, C-terminal domain GNK04_22555 PF01979 Amidohydrolase family GNK04_22555 PF13382 Adenine deaminase C-terminal domain GNK04_22560 PF00465 Iron-containing alcohol dehydrogenase GNK04_22565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNK04_22570 PF02559 CarD-like/TRCF domain GNK04_22575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNK04_22575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNK04_22580 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GNK04_22580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNK04_22585 PF01380 SIS domain GNK04_22585 PF01418 Helix-turn-helix domain, rpiR family GNK04_22590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNK04_22600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNK04_22600 PF00384 Molybdopterin oxidoreductase GNK04_22600 PF01568 Molydopterin dinucleotide binding domain GNK04_22605 PF00196 Bacterial regulatory proteins, luxR family GNK04_22610 PF00268 Ribonucleotide reductase, small chain GNK04_22615 PF00171 Aldehyde dehydrogenase family GNK04_22620 PF00465 Iron-containing alcohol dehydrogenase GNK04_22630 PF10672 S-adenosylmethionine-dependent methyltransferase GNK04_22630 PF17785 PUA-like domain GNK04_22635 PF07690 Major Facilitator Superfamily GNK04_22645 PF00005 ABC transporter GNK04_22660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNK04_22665 PF12728 Helix-turn-helix domain GNK04_22675 PF13580 SIS domain GNK04_22685 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GNK04_22690 PF01979 Amidohydrolase family GNK04_22695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNK04_22695 PF02378 Phosphotransferase system, EIIC GNK04_22695 PF00367 phosphotransferase system, EIIB GNK04_22710 PF06039 Malate:quinone oxidoreductase (Mqo) GNK04_22715 PF01207 Dihydrouridine synthase (Dus) GNK04_22720 PF02590 Predicted SPOUT methyltransferase GNK04_22730 PF13180 PDZ domain GNK04_22735 PF00753 Metallo-beta-lactamase superfamily GNK04_22740 PF09648 YycH protein GNK04_22750 PF00672 HAMP domain GNK04_22750 PF13426 PAS domain GNK04_22750 PF00512 His Kinase A (phospho-acceptor) domain GNK04_22750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNK04_22755 PF00072 Response regulator receiver domain GNK04_22755 PF00486 Transcriptional regulatory protein, C terminal GNK04_22760 PF01476 LysM domain GNK04_22760 PF08525 Opacity-associated protein A N-terminal motif GNK04_22760 PF01551 Peptidase family M23 GNK04_22790 PF00709 Adenylosuccinate synthetase GNK04_22795 PF03796 DnaB-like helicase C terminal domain GNK04_22795 PF00772 DnaB-like helicase N terminal domain GNK04_22800 PF03948 Ribosomal protein L9, C-terminal domain GNK04_22800 PF01281 Ribosomal protein L9, N-terminal domain GNK04_22805 PF01368 DHH family GNK04_22805 PF02272 DHHA1 domain GNK04_22810 PF09991 Predicted membrane protein (DUF2232) GNK04_22820 PF01084 Ribosomal protein S18 GNK04_22825 PF00436 Single-strand binding protein family GNK04_22835 PF06071 Protein of unknown function (DUF933) GNK04_22835 PF01926 50S ribosome-binding GTPase GNK04_22840 PF06107 Bacterial protein of unknown function (DUF951) GNK04_22845 PF00924 Mechanosensitive ion channel GNK04_22855 PF06866 Protein of unknown function (DUF1256) GNK04_22865 PF00266 Aminotransferase class-V GNK04_22870 PF02195 ParB-like nuclease domain GNK04_22870 PF17762 HTH domain found in ParB protein GNK04_22875 PF13614 AAA domain GNK04_22880 PF17762 HTH domain found in ParB protein GNK04_22880 PF02195 ParB-like nuclease domain GNK04_22885 PF02527 rRNA small subunit methyltransferase G GNK04_22890 PF13932 GidA associated domain GNK04_22890 PF01134 Glucose inhibited division protein A GNK04_22895 PF10396 GTP-binding protein TrmE N-terminus GNK04_22895 PF01926 50S ribosome-binding GTPase GNK04_22895 PF12631 MnmE helical domain GNK04_22900 PF14804 Jag N-terminus GNK04_22900 PF01424 R3H domain GNK04_22905 PF02096 60Kd inner membrane protein GNK04_22910 PF01809 Putative membrane protein insertion efficiency factor GNK04_22915 PF00825 Ribonuclease P GNK04_22920 PF00468 Ribosomal protein L34