locus-tag class description M654_000005 PF01336 OB-fold nucleic acid binding domain M654_000005 PF00152 tRNA synthetases class II (D, K and N) M654_000010 PF01207 Dihydrouridine synthase (Dus) M654_000015 PF01381 Helix-turn-helix M654_000020 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M654_000025 PF02152 Dihydroneopterin aldolase M654_000030 PF00809 Pterin binding enzyme M654_000035 PF01063 Amino-transferase class IV M654_000040 PF00117 Glutamine amidotransferase class-I M654_000045 PF04715 Anthranilate synthase component I, N terminal region M654_000045 PF00425 chorismate binding enzyme M654_000050 PF00291 Pyridoxal-phosphate dependent enzyme M654_000055 PF13145 PPIC-type PPIASE domain M654_000060 PF01430 Hsp33 protein M654_000065 PF03309 Type III pantothenate kinase M654_000070 PF06480 FtsH Extracellular M654_000070 PF00004 ATPase family associated with various cellular activities (AAA) M654_000070 PF01434 Peptidase family M41 M654_000070 PF17862 AAA+ lid domain M654_000095 PF00069 Protein kinase domain M654_000100 PF00092 von Willebrand factor type A domain M654_000105 PF07228 Stage II sporulation protein E (SpoIIE) M654_000120 PF00575 S1 RNA binding domain M654_000125 PF04977 Septum formation initiator M654_000130 PF09578 Spore cortex protein YabQ (Spore_YabQ) M654_000135 PF07873 YabP family M654_000140 PF01479 S4 domain M654_000145 PF03819 MazG nucleotide pyrophosphohydrolase domain M654_000145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M654_000150 PF01943 Polysaccharide biosynthesis protein M654_000150 PF14667 Polysaccharide biosynthesis C-terminal domain M654_000155 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M654_000155 PF15714 Stage V sporulation protein T C-terminal, transcription factor M654_000160 PF03461 TRCF domain M654_000160 PF17757 UvrB interaction domain M654_000160 PF00271 Helicase conserved C-terminal domain M654_000160 PF00270 DEAD/DEAH box helicase M654_000160 PF02559 CarD-like/TRCF domain M654_000165 PF10955 Protein of unknown function (DUF2757) M654_000170 PF01195 Peptidyl-tRNA hydrolase M654_000175 PF01386 Ribosomal L25p family M654_000175 PF14693 Ribosomal protein TL5, C-terminal domain M654_000180 PF14572 Phosphoribosyl synthetase-associated domain M654_000180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M654_000185 PF00132 Bacterial transferase hexapeptide (six repeats) M654_000185 PF00483 Nucleotidyl transferase M654_000190 PF04026 SpoVG M654_000195 PF01042 Endoribonuclease L-PSP M654_000200 PF09182 Bacterial purine repressor, N-terminal M654_000200 PF00156 Phosphoribosyl transferase domain M654_000205 PF00288 GHMP kinases N terminal domain M654_000205 PF08544 GHMP kinases C terminal M654_000210 PF00269 Small, acid-soluble spore proteins, alpha/beta type M654_000215 PF06257 Biofilm formation stimulator VEG M654_000220 PF05582 YabG peptidase U57 M654_000225 PF00398 Ribosomal RNA adenine dimethylase M654_000230 PF13662 Toprim domain M654_000230 PF13331 Domain of unknown function (DUF4093) M654_000235 PF07501 G5 domain M654_000235 PF06725 3D domain M654_000235 PF03990 G5-linked-Ubiquitin-like domain M654_000240 PF01026 TatD related DNase M654_000245 PF01588 Putative tRNA binding domain M654_000245 PF09334 tRNA synthetases class I (M) M654_000245 PF08264 Anticodon-binding domain of tRNA M654_000250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M654_000250 PF18277 AbrB C-terminal domain M654_000255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M654_000260 PF01541 GIY-YIG catalytic domain M654_000265 PF05175 Methyltransferase small domain M654_000270 PF06156 Initiation control protein YabA M654_000275 PF04468 PSP1 C-terminal conserved region M654_000280 PF09115 DNA polymerase III, delta subunit, C terminal M654_000285 PF03885 Protein of unknown function (DUF327) M654_000290 PF06153 Cyclic-di-AMP receptor M654_000295 PF02223 Thymidylate kinase M654_000300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M654_000300 PF01276 Orn/Lys/Arg decarboxylase, major domain M654_000305 PF05816 Toxic anion resistance protein (TelA) M654_000310 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein M654_000315 PF10764 Inhibitor of sigma-G Gin M654_000320 PF00324 Amino acid permease M654_000330 PF12867 DinB superfamily M654_000350 PF10704 Protein of unknown function (DUF2508) M654_000355 PF07441 SigmaK-factor processing regulatory protein BofA M654_000360 PF07441 SigmaK-factor processing regulatory protein BofA M654_000365 PF10704 Protein of unknown function (DUF2508) M654_000370 PF13662 Toprim domain M654_000370 PF02132 RecR protein M654_000375 PF02575 YbaB/EbfC DNA-binding family M654_000380 PF12169 DNA polymerase III subunits gamma and tau domain III M654_000390 PF14437 MafB19-like deaminase M654_000395 PF00857 Isochorismatase family M654_000400 PF01476 LysM domain M654_000400 PF00704 Glycosyl hydrolases family 18 M654_000405 PF01712 Deoxynucleoside kinase M654_000410 PF01712 Deoxynucleoside kinase M654_000425 PF13556 PucR C-terminal helix-turn-helix domain M654_000425 PF05651 Putative sugar diacid recognition M654_000425 PF17853 GGDEF-like domain M654_000430 PF02447 GntP family permease M654_000435 PF02595 Glycerate kinase family M654_000440 PF02403 Seryl-tRNA synthetase N-terminal domain M654_000440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M654_000445 PF01174 SNO glutamine amidotransferase family M654_000450 PF01680 SOR/SNZ family M654_000455 PF00768 D-alanyl-D-alanine carboxypeptidase M654_000455 PF07943 Penicillin-binding protein 5, C-terminal domain M654_000460 PF00478 IMP dehydrogenase / GMP reductase domain M654_000460 PF00571 CBS domain M654_000495 PF10704 Protein of unknown function (DUF2508) M654_000500 PF07441 SigmaK-factor processing regulatory protein BofA M654_000505 PF00521 DNA gyrase/topoisomerase IV, subunit A M654_000505 PF03989 DNA gyrase C-terminal domain, beta-propeller M654_000510 PF00986 DNA gyrase B subunit, carboxyl terminus M654_000510 PF00204 DNA gyrase B M654_000510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_000510 PF01751 Toprim domain M654_000515 PF04025 Domain of unknown function (DUF370) M654_000520 PF02463 RecF/RecN/SMC N terminal domain M654_000530 PF02767 DNA polymerase III beta subunit, central domain M654_000530 PF00712 DNA polymerase III beta subunit, N-terminal domain M654_000530 PF02768 DNA polymerase III beta subunit, C-terminal domain M654_000535 PF00308 Bacterial dnaA protein M654_000535 PF11638 DnaA N-terminal domain M654_000535 PF08299 Bacterial dnaA protein helix-turn-helix M654_000540 PF00468 Ribosomal protein L34 M654_000545 PF00825 Ribonuclease P M654_000550 PF02096 60Kd inner membrane protein M654_000555 PF14804 Jag N-terminus M654_000555 PF01424 R3H domain M654_000560 PF01926 50S ribosome-binding GTPase M654_000560 PF12631 MnmE helical domain M654_000560 PF10396 GTP-binding protein TrmE N-terminus M654_000565 PF13932 GidA associated domain M654_000565 PF01134 Glucose inhibited division protein A M654_000570 PF02527 rRNA small subunit methyltransferase G M654_000575 PF17762 HTH domain found in ParB protein M654_000575 PF02195 ParB-like nuclease domain M654_000580 PF08281 Sigma-70, region 4 M654_000580 PF04542 Sigma-70 region 2 M654_000585 PF02627 Carboxymuconolactone decarboxylase family M654_000590 PF13614 AAA domain M654_000595 PF17762 HTH domain found in ParB protein M654_000595 PF02195 ParB-like nuclease domain M654_000600 PF06866 Protein of unknown function (DUF1256) M654_000610 PF06107 Bacterial protein of unknown function (DUF951) M654_000615 PF06071 Protein of unknown function (DUF933) M654_000615 PF01926 50S ribosome-binding GTPase M654_000620 PF01250 Ribosomal protein S6 M654_000625 PF00436 Single-strand binding protein family M654_000630 PF01084 Ribosomal protein S18 M654_000635 PF02796 Helix-turn-helix domain of resolvase M654_000635 PF00239 Resolvase, N terminal domain M654_000640 PF01740 STAS domain M654_000640 PF00916 Sulfate permease family M654_000645 PF00582 Universal stress protein family M654_000655 PF07690 Major Facilitator Superfamily M654_000660 PF01740 STAS domain M654_000660 PF00916 Sulfate permease family M654_000665 PF00582 Universal stress protein family M654_000670 PF07875 Coat F domain M654_000675 PF09991 Predicted membrane protein (DUF2232) M654_000680 PF01368 DHH family M654_000680 PF02272 DHHA1 domain M654_000685 PF03948 Ribosomal protein L9, C-terminal domain M654_000685 PF01281 Ribosomal protein L9, N-terminal domain M654_000690 PF00367 phosphotransferase system, EIIB M654_000690 PF02378 Phosphotransferase system, EIIC M654_000695 PF01380 SIS domain M654_000700 PF07702 UTRA domain M654_000700 PF00392 Bacterial regulatory proteins, gntR family M654_000705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M654_000710 PF01979 Amidohydrolase family M654_000715 PF12833 Helix-turn-helix domain M654_000720 PF07690 Major Facilitator Superfamily M654_000730 PF00772 DnaB-like helicase N terminal domain M654_000730 PF03796 DnaB-like helicase C terminal domain M654_000735 PF00709 Adenylosuccinate synthetase M654_000740 PF00293 NUDIX domain M654_000765 PF00072 Response regulator receiver domain M654_000765 PF00486 Transcriptional regulatory protein, C terminal M654_000770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_000770 PF00672 HAMP domain M654_000770 PF00512 His Kinase A (phospho-acceptor) domain M654_000770 PF13426 PAS domain M654_000775 PF07435 YycH protein M654_000780 PF09648 YycH protein M654_000785 PF00753 Metallo-beta-lactamase superfamily M654_000790 PF13180 PDZ domain M654_000805 PF00583 Acetyltransferase (GNAT) family M654_000815 PF14116 YyzF-like protein M654_000820 PF02590 Predicted SPOUT methyltransferase M654_000830 PF00145 C-5 cytosine-specific DNA methylase M654_000855 PF13411 MerR HTH family regulatory protein M654_000860 PF01381 Helix-turn-helix M654_000875 PF00072 Response regulator receiver domain M654_000875 PF00196 Bacterial regulatory proteins, luxR family M654_000880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_000880 PF07730 Histidine kinase M654_000890 PF00005 ABC transporter M654_000905 PF01032 FecCD transport family M654_000910 PF01032 FecCD transport family M654_000915 PF01497 Periplasmic binding protein M654_000930 PF13192 Thioredoxin domain M654_000930 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_000935 PF00578 AhpC/TSA family M654_000940 PF00654 Voltage gated chloride channel M654_000950 PF00465 Iron-containing alcohol dehydrogenase M654_000950 PF00171 Aldehyde dehydrogenase family M654_000955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M654_000955 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M654_000960 PF02447 GntP family permease M654_000965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M654_000965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M654_000970 PF00392 Bacterial regulatory proteins, gntR family M654_000970 PF07729 FCD domain M654_000975 PF01878 EVE domain M654_000980 PF00581 Rhodanese-like domain M654_000985 PF01047 MarR family M654_000990 PF01325 Iron dependent repressor, N-terminal DNA binding domain M654_000990 PF00480 ROK family M654_000995 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M654_000995 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M654_001000 PF16363 GDP-mannose 4,6 dehydratase M654_001005 PF10509 Galactokinase galactose-binding signature M654_001005 PF08544 GHMP kinases C terminal M654_001005 PF00288 GHMP kinases N terminal domain M654_001010 PF00356 Bacterial regulatory proteins, lacI family M654_001015 PF13416 Bacterial extracellular solute-binding protein M654_001020 PF00528 Binding-protein-dependent transport system inner membrane component M654_001025 PF00528 Binding-protein-dependent transport system inner membrane component M654_001030 PF02449 Beta-galactosidase M654_001030 PF08532 Beta-galactosidase trimerisation domain M654_001030 PF08533 Beta-galactosidase C-terminal domain M654_001035 PF07745 Glycosyl hydrolase family 53 M654_001050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M654_001050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M654_001055 PF01235 Sodium:alanine symporter family M654_001060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_001060 PF00672 HAMP domain M654_001060 PF05227 CHASE3 domain M654_001070 PF00486 Transcriptional regulatory protein, C terminal M654_001070 PF00072 Response regulator receiver domain M654_001075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_001080 PF00005 ABC transporter M654_001085 PF02687 FtsX-like permease family M654_001100 PF07664 Ferrous iron transport protein B C terminus M654_001100 PF07670 Nucleoside recognition M654_001100 PF02421 Ferrous iron transport protein B M654_001100 PF17910 FeoB cytosolic helical domain M654_001115 PF01497 Periplasmic binding protein M654_001130 PF13685 Iron-containing alcohol dehydrogenase M654_001140 PF00005 ABC transporter M654_001140 PF12848 ABC transporter M654_001145 PF00183 Hsp90 protein M654_001155 PF07690 Major Facilitator Superfamily M654_001160 PF03009 Glycerophosphoryl diester phosphodiesterase family M654_001165 PF00248 Aldo/keto reductase family M654_001170 PF08220 DeoR-like helix-turn-helix domain M654_001170 PF00455 DeoR C terminal sensor domain M654_001175 PF00171 Aldehyde dehydrogenase family M654_001180 PF04962 KduI/IolB family M654_001185 PF00294 pfkB family carbohydrate kinase M654_001190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M654_001190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M654_001190 PF00205 Thiamine pyrophosphate enzyme, central domain M654_001195 PF01261 Xylose isomerase-like TIM barrel M654_001200 PF07690 Major Facilitator Superfamily M654_001205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M654_001205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M654_001210 PF01261 Xylose isomerase-like TIM barrel M654_001215 PF01261 Xylose isomerase-like TIM barrel M654_001220 PF01116 Fructose-bisphosphate aldolase class-II M654_001225 PF00892 EamA-like transporter family M654_001230 PF07478 D-ala D-ala ligase C-terminus M654_001230 PF01820 D-ala D-ala ligase N-terminus M654_001245 PF00155 Aminotransferase class I and II M654_001250 PF03170 Bacterial cellulose synthase subunit M654_001260 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) M654_001265 PF00990 Diguanylate cyclase, GGDEF domain M654_001280 PF18801 response regulator aspartate phosphatase H, N terminal M654_001285 PF13195 Protein of unknown function (DUF4011) M654_001285 PF13086 AAA domain M654_001285 PF13087 AAA domain M654_001290 PF04198 Putative sugar-binding domain M654_001295 PF01791 DeoC/LacD family aldolase M654_001300 PF01773 Na+ dependent nucleoside transporter N-terminus M654_001300 PF07662 Na+ dependent nucleoside transporter C-terminus M654_001305 PF02885 Glycosyl transferase family, helical bundle domain M654_001305 PF00591 Glycosyl transferase family, a/b domain M654_001305 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M654_001320 PF00271 Helicase conserved C-terminal domain M654_001320 PF00270 DEAD/DEAH box helicase M654_001320 PF03880 DbpA RNA binding domain M654_001325 PF04616 Glycosyl hydrolases family 43 M654_001325 PF16369 C-terminal lipocalin-like domain M654_001335 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family M654_001355 PF00367 phosphotransferase system, EIIB M654_001355 PF02378 Phosphotransferase system, EIIC M654_001355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M654_001360 PF00232 Glycosyl hydrolase family 1 M654_001365 PF00486 Transcriptional regulatory protein, C terminal M654_001365 PF00072 Response regulator receiver domain M654_001370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_001375 PF00005 ABC transporter M654_001380 PF02687 FtsX-like permease family M654_001385 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase M654_001395 PF01274 Malate synthase M654_001400 PF00463 Isocitrate lyase family M654_001405 PF03070 TENA/THI-4/PQQC family M654_001410 PF09819 ABC-type cobalt transport system, permease component M654_001415 PF00005 ABC transporter M654_001420 PF02361 Cobalt transport protein M654_001425 PF03123 CAT RNA binding domain M654_001425 PF00874 PRD domain M654_001430 PF02378 Phosphotransferase system, EIIC M654_001430 PF00367 phosphotransferase system, EIIB M654_001430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M654_001435 PF00232 Glycosyl hydrolase family 1 M654_001445 PF00199 Catalase M654_001445 PF18011 C-terminal domain found in long catalases M654_001445 PF06628 Catalase-related immune-responsive M654_001455 PF01381 Helix-turn-helix M654_001460 PF07662 Na+ dependent nucleoside transporter C-terminus M654_001460 PF01773 Na+ dependent nucleoside transporter N-terminus M654_001485 PF01370 NAD dependent epimerase/dehydratase family M654_001490 PF00535 Glycosyl transferase family 2 M654_001495 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase M654_001500 PF01717 Cobalamin-independent synthase, Catalytic domain M654_001515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_001520 PF03611 PTS system sugar-specific permease component M654_001525 PF00294 pfkB family carbohydrate kinase M654_001530 PF00596 Class II Aldolase and Adducin N-terminal domain M654_001550 PF00356 Bacterial regulatory proteins, lacI family M654_001560 PF00528 Binding-protein-dependent transport system inner membrane component M654_001565 PF00528 Binding-protein-dependent transport system inner membrane component M654_001570 PF01306 LacY proton/sugar symporter M654_001575 PF08244 Glycosyl hydrolases family 32 C terminal M654_001575 PF00251 Glycosyl hydrolases family 32 N-terminal domain M654_001580 PF01546 Peptidase family M20/M25/M40 M654_001580 PF07687 Peptidase dimerisation domain M654_001590 PF08281 Sigma-70, region 4 M654_001590 PF04542 Sigma-70 region 2 M654_001600 PF02378 Phosphotransferase system, EIIC M654_001605 PF00232 Glycosyl hydrolase family 1 M654_001610 PF02899 Phage integrase, N-terminal SAM-like domain M654_001610 PF00589 Phage integrase family M654_001610 PF00589 Phage integrase family M654_001610 PF02899 Phage integrase, N-terminal SAM-like domain M654_001630 PF00072 Response regulator receiver domain M654_001630 PF00486 Transcriptional regulatory protein, C terminal M654_001635 PF00005 ABC transporter M654_001655 PF00696 Amino acid kinase family M654_001660 PF13520 Amino acid permease M654_001665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M654_001665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M654_001675 PF01316 Arginine repressor, DNA binding domain M654_001675 PF02863 Arginine repressor, C-terminal domain M654_001680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M654_001680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M654_001685 PF06013 Proteins of 100 residues with WXG M654_001705 PF17353 Family of unknown function (DUF5381) M654_001710 PF00884 Sulfatase M654_001720 PF04740 LXG domain of WXG superfamily M654_001720 PF14449 Pre-toxin TG M654_001720 PF14431 YwqJ-like deaminase M654_001735 PF05901 Excalibur calcium-binding domain M654_001740 PF03009 Glycerophosphoryl diester phosphodiesterase family M654_001745 PF03390 2-hydroxycarboxylate transporter family M654_001750 PF07238 PilZ domain M654_001750 PF00535 Glycosyl transferase family 2 M654_001760 PF00392 Bacterial regulatory proteins, gntR family M654_001760 PF00155 Aminotransferase class I and II M654_001765 PF01522 Polysaccharide deacetylase M654_001775 PF10282 Lactonase, 7-bladed beta-propeller M654_001780 PF01381 Helix-turn-helix M654_001785 PF17763 Glutaminase/Asparaginase C-terminal domain M654_001785 PF00710 Asparaginase, N-terminal M654_001790 PF00206 Lyase M654_001790 PF10415 Fumarase C C-terminus M654_001795 PF03553 Na+/H+ antiporter family M654_001800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M654_001800 PF00390 Malic enzyme, N-terminal domain M654_001800 PF03949 Malic enzyme, NAD binding domain M654_001810 PF01226 Formate/nitrite transporter M654_001815 PF03881 Fructosamine kinase M654_001820 PF01654 Cytochrome bd terminal oxidase subunit I M654_001825 PF02322 Cytochrome bd terminal oxidase subunit II M654_001830 PF00664 ABC transporter transmembrane region M654_001830 PF00005 ABC transporter M654_001835 PF00005 ABC transporter M654_001835 PF00664 ABC transporter transmembrane region M654_001840 PF04235 Protein of unknown function (DUF418) M654_001845 PF01256 Carbohydrate kinase M654_001850 PF00544 Pectate lyase M654_001865 PF06628 Catalase-related immune-responsive M654_001865 PF00199 Catalase M654_001870 PF00199 Catalase M654_001870 PF06628 Catalase-related immune-responsive M654_001875 PF07690 Major Facilitator Superfamily M654_001880 PF04542 Sigma-70 region 2 M654_001880 PF08281 Sigma-70, region 4 M654_001900 PF00005 ABC transporter M654_001900 PF13732 Domain of unknown function (DUF4162) M654_001905 PF12679 ABC-2 family transporter protein M654_001910 PF07690 Major Facilitator Superfamily M654_001915 PF17735 Biofilm surface layer A M654_001920 PF17735 Biofilm surface layer A M654_001925 PF13472 GDSL-like Lipase/Acylhydrolase family M654_001930 PF00664 ABC transporter transmembrane region M654_001930 PF00005 ABC transporter M654_001935 PF03551 Transcriptional regulator PadR-like family M654_001950 PF03972 MmgE/PrpD family M654_001955 PF00285 Citrate synthase, C-terminal domain M654_001960 PF00392 Bacterial regulatory proteins, gntR family M654_001960 PF07729 FCD domain M654_001970 PF02719 Polysaccharide biosynthesis protein M654_001975 PF02350 UDP-N-acetylglucosamine 2-epimerase M654_001980 PF02245 Methylpurine-DNA glycosylase (MPG) M654_001985 PF05043 Mga helix-turn-helix domain M654_001985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_001985 PF08279 HTH domain M654_001985 PF00874 PRD domain M654_001990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_001995 PF02378 Phosphotransferase system, EIIC M654_002000 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M654_002005 PF11975 Family 4 glycosyl hydrolase C-terminal domain M654_002005 PF02056 Family 4 glycosyl hydrolase M654_002010 PF07690 Major Facilitator Superfamily M654_002015 PF01063 Amino-transferase class IV M654_002020 PF04914 DltD protein M654_002025 PF00550 Phosphopantetheine attachment site M654_002030 PF03062 MBOAT, membrane-bound O-acyltransferase family M654_002035 PF13193 AMP-binding enzyme C-terminal domain M654_002035 PF00501 AMP-binding enzyme M654_002040 PF12459 D-Ala-teichoic acid biosynthesis protein M654_002045 PF04607 Region found in RelA / SpoT proteins M654_002050 PF00857 Isochorismatase family M654_002055 PF07690 Major Facilitator Superfamily M654_002065 PF04389 Peptidase family M28 M654_002065 PF02225 PA domain M654_002070 PF01614 Bacterial transcriptional regulator M654_002070 PF09339 IclR helix-turn-helix domain M654_002075 PF00294 pfkB family carbohydrate kinase M654_002080 PF01081 KDPG and KHG aldolase M654_002085 PF13378 Enolase C-terminal domain-like M654_002085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M654_002090 PF07690 Major Facilitator Superfamily M654_002095 PF09529 Integral membrane protein (intg_mem_TP0381) M654_002100 PF03176 MMPL family M654_002105 PF00072 Response regulator receiver domain M654_002105 PF00196 Bacterial regulatory proteins, luxR family M654_002110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_002110 PF07730 Histidine kinase M654_002125 PF01501 Glycosyl transferase family 8 M654_002130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M654_002130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M654_002135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_002140 PF10672 S-adenosylmethionine-dependent methyltransferase M654_002140 PF17785 PUA-like domain M654_002145 PF00474 Sodium:solute symporter family M654_002150 PF04172 LrgB-like family M654_002155 PF03788 LrgA family M654_002170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_002170 PF03466 LysR substrate binding domain M654_002175 PF02110 Hydroxyethylthiazole kinase family M654_002180 PF02581 Thiamine monophosphate synthase M654_002185 PF00480 ROK family M654_002190 PF01261 Xylose isomerase-like TIM barrel M654_002195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M654_002195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M654_002200 PF00474 Sodium:solute symporter family M654_002205 PF04341 Protein of unknown function, DUF485 M654_002210 PF03358 NADPH-dependent FMN reductase M654_002220 PF16363 GDP-mannose 4,6 dehydratase M654_002225 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M654_002225 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M654_002230 PF00115 Cytochrome C and Quinol oxidase polypeptide I M654_002235 PF00510 Cytochrome c oxidase subunit III M654_002240 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M654_002245 PF17368 Spore morphogenesis and germination YwcE M654_002260 PF01098 Cell cycle protein M654_002265 PF01098 Cell cycle protein M654_002270 PF00881 Nitroreductase family M654_002275 PF00296 Luciferase-like monooxygenase M654_002285 PF13860 FlgD Ig-like domain M654_002285 PF05922 Peptidase inhibitor I9 M654_002285 PF02225 PA domain M654_002285 PF00082 Subtilase family M654_002295 PF00874 PRD domain M654_002295 PF03123 CAT RNA binding domain M654_002300 PF02378 Phosphotransferase system, EIIC M654_002300 PF00367 phosphotransferase system, EIIB M654_002305 PF00251 Glycosyl hydrolases family 32 N-terminal domain M654_002305 PF08244 Glycosyl hydrolases family 32 C terminal M654_002315 PF08543 Phosphomethylpyrimidine kinase M654_002320 PF04239 Protein of unknown function (DUF421) M654_002325 PF00535 Glycosyl transferase family 2 M654_002330 PF03167 Uracil DNA glycosylase superfamily M654_002335 PF17261 Family of unknown function (DUF5327) M654_002340 PF00860 Permease family M654_002345 PF04241 Protein of unknown function (DUF423) M654_002350 PF00072 Response regulator receiver domain M654_002350 PF00196 Bacterial regulatory proteins, luxR family M654_002360 PF00005 ABC transporter M654_002375 PF09671 Spore coat protein (Spore_GerQ) M654_002380 PF02386 Cation transport protein M654_002385 PF17735 Biofilm surface layer A M654_002395 PF01515 Phosphate acetyl/butaryl transferase M654_002405 PF01614 Bacterial transcriptional regulator M654_002405 PF09339 IclR helix-turn-helix domain M654_002410 PF00171 Aldehyde dehydrogenase family M654_002420 PF01361 Tautomerase enzyme M654_002430 PF07690 Major Facilitator Superfamily M654_002435 PF01494 FAD binding domain M654_002440 PF03099 Biotin/lipoate A/B protein ligase family M654_002445 PF14154 Domain of unknown function (DUF4306) M654_002455 PF07293 Protein of unknown function (DUF1450) M654_002460 PF01966 HD domain M654_002475 PF01361 Tautomerase enzyme M654_002480 PF02163 Peptidase family M50 M654_002485 PF08741 YwhD family M654_002490 PF00912 Transglycosylase M654_002490 PF00905 Penicillin binding protein transpeptidase domain M654_002500 PF17284 Spermidine synthase tetramerisation domain M654_002505 PF00491 Arginase family M654_002510 PF09148 Domain of unknown function (DUF1934) M654_002515 PF00750 tRNA synthetases class I (R) M654_002515 PF03485 Arginyl tRNA synthetase N terminal domain M654_002515 PF05746 DALR anticodon binding domain M654_002525 PF13091 PLD-like domain M654_002530 PF13183 4Fe-4S dicluster domain M654_002530 PF02754 Cysteine-rich domain M654_002535 PF02803 Thiolase, C-terminal domain M654_002535 PF00108 Thiolase, N-terminal domain M654_002540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M654_002540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M654_002545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M654_002545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M654_002545 PF02770 Acyl-CoA dehydrogenase, middle domain M654_002550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M654_002550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M654_002550 PF02770 Acyl-CoA dehydrogenase, middle domain M654_002555 PF05066 HB1, ASXL, restriction endonuclease HTH domain M654_002560 PF00117 Glutamine amidotransferase class-I M654_002560 PF06418 CTP synthase N-terminus M654_002565 PF10740 Domain of unknown function (DUF2529) M654_002570 PF00072 Response regulator receiver domain M654_002575 PF01116 Fructose-bisphosphate aldolase class-II M654_002580 PF00923 Transaldolase/Fructose-6-phosphate aldolase M654_002585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M654_002590 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M654_002595 PF07497 Rho termination factor, RNA-binding domain M654_002595 PF07498 Rho termination factor, N-terminal domain M654_002595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M654_002600 PF01197 Ribosomal protein L31 M654_002605 PF00265 Thymidine kinase M654_002610 PF03949 Malic enzyme, NAD binding domain M654_002610 PF00390 Malic enzyme, N-terminal domain M654_002615 PF03547 Membrane transport protein M654_002620 PF13411 MerR HTH family regulatory protein M654_002625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_002630 PF00472 RF-1 domain M654_002630 PF03462 PCRF domain M654_002635 PF17827 PrmC N-terminal domain M654_002635 PF05175 Methyltransferase small domain M654_002640 PF09551 Stage II sporulation protein R (spore_II_R) M654_002650 PF03481 Putative GTP-binding controlling metal-binding M654_002650 PF01300 Telomere recombination M654_002655 PF02659 Putative manganese efflux pump M654_002660 PF01451 Low molecular weight phosphotyrosine protein phosphatase M654_002665 PF02502 Ribose/Galactose Isomerase M654_002670 PF04260 Protein of unknown function (DUF436) M654_002675 PF00464 Serine hydroxymethyltransferase M654_002685 PF03899 ATP synthase I chain M654_002690 PF00119 ATP synthase A chain M654_002695 PF00137 ATP synthase subunit C M654_002700 PF00430 ATP synthase B/B' CF(0) M654_002705 PF00213 ATP synthase delta (OSCP) subunit M654_002710 PF00306 ATP synthase alpha/beta chain, C terminal domain M654_002710 PF02874 ATP synthase alpha/beta family, beta-barrel domain M654_002710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M654_002715 PF00231 ATP synthase M654_002720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M654_002720 PF02874 ATP synthase alpha/beta family, beta-barrel domain M654_002725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M654_002725 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M654_002730 PF06612 Protein of unknown function (DUF1146) M654_002735 PF08680 TATA-box binding M654_002740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M654_002745 PF08486 Stage II sporulation protein M654_002750 PF00092 von Willebrand factor type A domain M654_002755 PF00092 von Willebrand factor type A domain M654_002760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M654_002760 PF00384 Molybdopterin oxidoreductase M654_002760 PF01568 Molydopterin dinucleotide binding domain M654_002765 PF07690 Major Facilitator Superfamily M654_002770 PF02634 FdhD/NarQ family M654_002775 PF04055 Radical SAM superfamily M654_002775 PF06463 Molybdenum Cofactor Synthesis C M654_002790 PF02082 Transcriptional regulator M654_002795 PF13460 NAD(P)H-binding M654_002800 PF17319 Family of unknown function (DUF5362) M654_002805 PF01497 Periplasmic binding protein M654_002805 PF12833 Helix-turn-helix domain M654_002810 PF01497 Periplasmic binding protein M654_002815 PF01032 FecCD transport family M654_002820 PF01032 FecCD transport family M654_002825 PF00756 Putative esterase M654_002830 PF00106 short chain dehydrogenase M654_002835 PF00425 chorismate binding enzyme M654_002840 PF13193 AMP-binding enzyme C-terminal domain M654_002840 PF00501 AMP-binding enzyme M654_002845 PF00550 Phosphopantetheine attachment site M654_002845 PF00857 Isochorismatase family M654_002850 PF00550 Phosphopantetheine attachment site M654_002850 PF00501 AMP-binding enzyme M654_002850 PF00975 Thioesterase domain M654_002850 PF00668 Condensation domain M654_002850 PF13193 AMP-binding enzyme C-terminal domain M654_002855 PF03621 MbtH-like protein M654_002860 PF07690 Major Facilitator Superfamily M654_002865 PF13396 Phospholipase_D-nuclease N-terminal M654_002865 PF13091 PLD-like domain M654_002870 PF17370 Family of unknown function (DUF5392) M654_002875 PF00583 Acetyltransferase (GNAT) family M654_002880 PF01551 Peptidase family M23 M654_002885 PF08281 Sigma-70, region 4 M654_002885 PF12680 SnoaL-like domain M654_002885 PF04542 Sigma-70 region 2 M654_002890 PF00574 Clp protease M654_002895 PF00543 Nitrogen regulatory protein P-II M654_002900 PF00909 Ammonium Transporter Family M654_002905 PF03471 Transporter associated domain M654_002905 PF00571 CBS domain M654_002905 PF01595 Cyclin M transmembrane N-terminal domain M654_002910 PF01544 CorA-like Mg2+ transporter protein M654_002915 PF00571 CBS domain M654_002920 PF09844 Uncharacterized conserved protein (COG2071) M654_002925 PF05067 Manganese containing catalase M654_002930 PF01368 DHH family M654_002930 PF02833 DHHA2 domain M654_002935 PF01569 PAP2 superfamily M654_002945 PF07690 Major Facilitator Superfamily M654_002950 PF01047 MarR family M654_002960 PF12116 Stage III sporulation protein D M654_002970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M654_002970 PF00460 Flagella basal body rod protein M654_002975 PF00460 Flagella basal body rod protein M654_002975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M654_002980 PF07977 FabA-like domain M654_002985 PF01741 Large-conductance mechanosensitive channel, MscL M654_002990 PF14183 YwpF-like protein M654_003000 PF00436 Single-strand binding protein family M654_003005 PF04198 Putative sugar-binding domain M654_003005 PF13936 Helix-turn-helix domain M654_003015 PF03608 PTS system enzyme II sorbitol-specific factor M654_003020 PF03612 Sorbitol phosphotransferase enzyme II N-terminus M654_003020 PF07663 Sorbitol phosphotransferase enzyme II C-terminus M654_003030 PF00106 short chain dehydrogenase M654_003035 PF00923 Transaldolase/Fructose-6-phosphate aldolase M654_003040 PF08220 DeoR-like helix-turn-helix domain M654_003040 PF00455 DeoR C terminal sensor domain M654_003050 PF09234 Domain of unknown function (DUF1963) M654_003055 PF12419 SNF2 Helicase protein M654_003055 PF00176 SNF2 family N-terminal domain M654_003055 PF00271 Helicase conserved C-terminal domain M654_003060 PF04434 SWIM zinc finger M654_003070 PF13807 G-rich domain on putative tyrosine kinase M654_003070 PF02706 Chain length determinant protein M654_003080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M654_003080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M654_003080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M654_003085 PF02417 Chromate transporter M654_003090 PF02417 Chromate transporter M654_003095 PF01037 Lrp/AsnC ligand binding domain M654_003095 PF13404 AsnC-type helix-turn-helix domain M654_003105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_003105 PF03466 LysR substrate binding domain M654_003110 PF00205 Thiamine pyrophosphate enzyme, central domain M654_003110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M654_003110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M654_003115 PF03306 Alpha-acetolactate decarboxylase M654_003120 PF08241 Methyltransferase domain M654_003125 PF03466 LysR substrate binding domain M654_003125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_003130 PF13407 Periplasmic binding protein domain M654_003135 PF02653 Branched-chain amino acid transport system / permease component M654_003140 PF00005 ABC transporter M654_003145 PF05025 RbsD / FucU transport protein family M654_003150 PF00294 pfkB family carbohydrate kinase M654_003155 PF00356 Bacterial regulatory proteins, lacI family M654_003160 PF08245 Mur ligase middle domain M654_003165 PF14102 Capsule biosynthesis CapC M654_003170 PF09587 Bacterial capsule synthesis protein PGA_cap M654_003175 PF00877 NlpC/P60 family M654_003185 PF03816 Cell envelope-related transcriptional attenuator domain M654_003190 PF00083 Sugar (and other) transporter M654_003195 PF08240 Alcohol dehydrogenase GroES-like domain M654_003195 PF13823 Alcohol dehydrogenase GroES-associated M654_003195 PF00107 Zinc-binding dehydrogenase M654_003205 PF04962 KduI/IolB family M654_003210 PF00356 Bacterial regulatory proteins, lacI family M654_003215 PF00294 pfkB family carbohydrate kinase M654_003220 PF01081 KDPG and KHG aldolase M654_003225 PF03812 2-keto-3-deoxygluconate permease M654_003230 PF03477 ATP cone domain M654_003230 PF13597 Anaerobic ribonucleoside-triphosphate reductase M654_003235 PF04055 Radical SAM superfamily M654_003240 PF01238 Phosphomannose isomerase type I M654_003245 PF08239 Bacterial SH3 domain M654_003245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M654_003245 PF05036 Sporulation related domain M654_003255 PF00534 Glycosyl transferases group 1 M654_003255 PF13439 Glycosyltransferase Family 4 M654_003260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M654_003260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M654_003260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M654_003265 PF02350 UDP-N-acetylglucosamine 2-epimerase M654_003270 PF00535 Glycosyl transferase family 2 M654_003280 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M654_003280 PF05036 Sporulation related domain M654_003280 PF08239 Bacterial SH3 domain M654_003285 PF00005 ABC transporter M654_003290 PF01061 ABC-2 type transporter M654_003295 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M654_003300 PF00534 Glycosyl transferases group 1 M654_003300 PF09318 Glycosyl transferase 1 domain A M654_003305 PF01467 Cytidylyltransferase-like M654_003310 PF03808 Glycosyl transferase WecB/TagA/CpsF family M654_003315 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M654_003320 PF00483 Nucleotidyl transferase M654_003325 PF03816 Cell envelope-related transcriptional attenuator domain M654_003335 PF01520 N-acetylmuramoyl-L-alanine amidase M654_003335 PF04122 Putative cell wall binding repeat 2 M654_003340 PF02397 Bacterial sugar transferase M654_003345 PF14667 Polysaccharide biosynthesis C-terminal domain M654_003345 PF01943 Polysaccharide biosynthesis protein M654_003350 PF00534 Glycosyl transferases group 1 M654_003350 PF13439 Glycosyltransferase Family 4 M654_003355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M654_003355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M654_003355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M654_003360 PF16363 GDP-mannose 4,6 dehydratase M654_003365 PF04932 O-Antigen ligase M654_003370 PF02706 Chain length determinant protein M654_003375 PF00535 Glycosyl transferase family 2 M654_003385 PF00953 Glycosyl transferase family 4 M654_003390 PF02368 Bacterial Ig-like domain (group 2) M654_003395 PF03816 Cell envelope-related transcriptional attenuator domain M654_003400 PF01205 Uncharacterized protein family UPF0029 M654_003400 PF09186 Domain of unknown function (DUF1949) M654_003405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_003405 PF05384 Sensor protein DegS M654_003405 PF07730 Histidine kinase M654_003410 PF00072 Response regulator receiver domain M654_003410 PF00196 Bacterial regulatory proteins, luxR family M654_003415 PF02645 Uncharacterised protein, DegV family COG1307 M654_003420 PF04851 Type III restriction enzyme, res subunit M654_003420 PF00271 Helicase conserved C-terminal domain M654_003425 PF10719 Late competence development protein ComFB M654_003440 PF04316 Anti-sigma-28 factor, FlgM M654_003445 PF05130 FlgN protein M654_003450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M654_003450 PF00460 Flagella basal body rod protein M654_003455 PF00669 Bacterial flagellin N-terminal helical region M654_003455 PF00700 Bacterial flagellin C-terminal helical region M654_003465 PF02623 FliW protein M654_003470 PF02599 Global regulator protein family M654_003475 PF00700 Bacterial flagellin C-terminal helical region M654_003475 PF00669 Bacterial flagellin N-terminal helical region M654_003485 PF03646 FlaG protein M654_003490 PF07196 Flagellin hook IN motif M654_003490 PF07195 Flagellar hook-associated protein 2 C-terminus M654_003490 PF02465 Flagellar hook-associated protein 2 N-terminus M654_003495 PF02561 Flagellar protein FliS M654_003510 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M654_003510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M654_003515 PF01043 SecA preprotein cross-linking domain M654_003515 PF07516 SecA Wing and Scaffold domain M654_003515 PF02810 SEC-C motif M654_003515 PF07517 SecA DEAD-like domain M654_003525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M654_003525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M654_003530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M654_003535 PF00005 ABC transporter M654_003540 PF18075 FtsX extracellular domain M654_003540 PF02687 FtsX-like permease family M654_003545 PF00877 NlpC/P60 family M654_003550 PF04397 LytTr DNA-binding domain M654_003550 PF00072 Response regulator receiver domain M654_003555 PF00005 ABC transporter M654_003565 PF00180 Isocitrate/isopropylmalate dehydrogenase M654_003570 PF01471 Putative peptidoglycan binding domain M654_003570 PF03572 Peptidase family S41 M654_003570 PF17820 PDZ domain M654_003575 PF17423 Swarming motility protein M654_003580 PF17820 PDZ domain M654_003590 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) M654_003595 PF02151 UvrB/uvrC motif M654_003595 PF04851 Type III restriction enzyme, res subunit M654_003595 PF17757 UvrB interaction domain M654_003595 PF00271 Helicase conserved C-terminal domain M654_003595 PF12344 Ultra-violet resistance protein B M654_003600 PF17755 UvrA DNA-binding domain M654_003600 PF17760 UvrA interaction domain M654_003600 PF00005 ABC transporter M654_003615 PF13349 Putative adhesin M654_003620 PF04024 PspC domain M654_003625 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M654_003630 PF00149 Calcineurin-like phosphoesterase M654_003635 PF07690 Major Facilitator Superfamily M654_003640 PF01047 MarR family M654_003645 PF07475 HPr Serine kinase C-terminal domain M654_003645 PF02603 HPr Serine kinase N terminus M654_003650 PF01790 Prolipoprotein diacylglyceryl transferase M654_003655 PF07670 Nucleoside recognition M654_003660 PF13419 Haloacid dehalogenase-like hydrolase M654_003665 PF14602 Hexapeptide repeat of succinyl-transferase M654_003670 PF00704 Glycosyl hydrolases family 18 M654_003675 PF13529 Peptidase_C39 like family M654_003680 PF13393 Histidyl-tRNA synthetase M654_003685 PF01634 ATP phosphoribosyltransferase M654_003690 PF00815 Histidinol dehydrogenase M654_003695 PF00475 Imidazoleglycerol-phosphate dehydratase M654_003700 PF00117 Glutamine amidotransferase class-I M654_003705 PF00977 Histidine biosynthesis protein M654_003710 PF00977 Histidine biosynthesis protein M654_003715 PF01502 Phosphoribosyl-AMP cyclohydrolase M654_003715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M654_003730 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_003735 PF00293 NUDIX domain M654_003740 PF03668 P-loop ATPase protein family M654_003745 PF01933 Uncharacterised protein family UPF0052 M654_003750 PF02650 WhiA C-terminal HTH domain M654_003750 PF14527 WhiA LAGLIDADG-like domain M654_003750 PF10298 WhiA N-terminal LAGLIDADG-like domain M654_003755 PF00381 PTS HPr component phosphorylation site M654_003760 PF00797 N-acetyltransferase M654_003765 PF01638 HxlR-like helix-turn-helix M654_003770 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M654_003775 PF01380 SIS domain M654_003785 PF01613 Flavin reductase like domain M654_003790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M654_003790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M654_003795 PF00484 Carbonic anhydrase M654_003800 PF00916 Sulfate permease family M654_003800 PF01740 STAS domain M654_003805 PF01966 HD domain M654_003810 PF03819 MazG nucleotide pyrophosphohydrolase domain M654_003815 PF03641 Possible lysine decarboxylase M654_003820 PF00574 Clp protease M654_003845 PF00251 Glycosyl hydrolases family 32 N-terminal domain M654_003845 PF08244 Glycosyl hydrolases family 32 C terminal M654_003850 PF02435 Levansucrase/Invertase M654_003855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M654_003860 PF01638 HxlR-like helix-turn-helix M654_003865 PF02525 Flavodoxin-like fold M654_003870 PF08671 Anti-repressor SinI M654_003870 PF01381 Helix-turn-helix M654_003875 PF02706 Chain length determinant protein M654_003880 PF13614 AAA domain M654_003885 PF02719 Polysaccharide biosynthesis protein M654_003890 PF13439 Glycosyltransferase Family 4 M654_003890 PF00534 Glycosyl transferases group 1 M654_003895 PF00535 Glycosyl transferase family 2 M654_003900 PF13439 Glycosyltransferase Family 4 M654_003900 PF00534 Glycosyl transferases group 1 M654_003910 PF00535 Glycosyl transferase family 2 M654_003915 PF04230 Polysaccharide pyruvyl transferase M654_003920 PF00535 Glycosyl transferase family 2 M654_003925 PF01943 Polysaccharide biosynthesis protein M654_003925 PF14667 Polysaccharide biosynthesis C-terminal domain M654_003930 PF02397 Bacterial sugar transferase M654_003935 PF17836 PglD N-terminal domain M654_003935 PF00132 Bacterial transferase hexapeptide (six repeats) M654_003940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M654_003945 PF04230 Polysaccharide pyruvyl transferase M654_003950 PF09628 YvfG protein M654_003955 PF00309 Sigma-54 factor, Activator interacting domain (AID) M654_003955 PF04963 Sigma-54 factor, core binding domain M654_003955 PF04552 Sigma-54, DNA binding domain M654_003960 PF02652 L-lactate permease M654_003965 PF00392 Bacterial regulatory proteins, gntR family M654_003965 PF07729 FCD domain M654_003970 PF02754 Cysteine-rich domain M654_003975 PF11870 Domain of unknown function (DUF3390) M654_003975 PF13183 4Fe-4S dicluster domain M654_003975 PF02589 LUD domain M654_003980 PF02589 LUD domain M654_004000 PF00005 ABC transporter M654_004005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_004005 PF03466 LysR substrate binding domain M654_004010 PF01161 Phosphatidylethanolamine-binding protein M654_004015 PF00082 Subtilase family M654_004015 PF05922 Peptidase inhibitor I9 M654_004030 PF00324 Amino acid permease M654_004035 PF00296 Luciferase-like monooxygenase M654_004040 PF00083 Sugar (and other) transporter M654_004045 PF04198 Putative sugar-binding domain M654_004050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M654_004050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M654_004055 PF00162 Phosphoglycerate kinase M654_004060 PF00121 Triosephosphate isomerase M654_004065 PF01676 Metalloenzyme superfamily M654_004065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M654_004070 PF03952 Enolase, N-terminal domain M654_004070 PF00113 Enolase, C-terminal TIM barrel domain M654_004075 PF01965 DJ-1/PfpI family M654_004085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_004085 PF00672 HAMP domain M654_004085 PF02743 Cache domain M654_004090 PF01497 Periplasmic binding protein M654_004095 PF13240 zinc-ribbon domain M654_004105 PF01914 MarC family integral membrane protein M654_004110 PF12802 MarR family M654_004115 PF00571 CBS domain M654_004115 PF00005 ABC transporter M654_004120 PF00528 Binding-protein-dependent transport system inner membrane component M654_004125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M654_004130 PF00528 Binding-protein-dependent transport system inner membrane component M654_004145 PF01381 Helix-turn-helix M654_004150 PF18277 AbrB C-terminal domain M654_004150 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M654_004155 PF03840 Preprotein translocase SecG subunit M654_004160 PF12146 Serine aminopeptidase, S33 M654_004165 PF00575 S1 RNA binding domain M654_004165 PF00773 RNB domain M654_004165 PF17876 Cold shock domain M654_004165 PF08206 Ribonuclease B OB domain M654_004170 PF01668 SmpB protein M654_004185 PF03422 Carbohydrate binding module (family 6) M654_004185 PF04616 Glycosyl hydrolases family 43 M654_004190 PF17189 Glycosyl hydrolase family 30 beta sandwich domain M654_004210 PF14184 Regulatory protein YrvL M654_004215 PF00190 Cupin M654_004220 PF12841 YvrJ protein family M654_004225 PF04545 Sigma-70, region 4 M654_004245 PF02525 Flavodoxin-like fold M654_004250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M654_004250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M654_004255 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase M654_004260 PF01425 Amidase M654_004265 PF01047 MarR family M654_004275 PF00067 Cytochrome P450 M654_004280 PF16715 Cyclodipeptide synthase M654_004285 PF07690 Major Facilitator Superfamily M654_004300 PF00596 Class II Aldolase and Adducin N-terminal domain M654_004310 PF01261 Xylose isomerase-like TIM barrel M654_004315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M654_004315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M654_004320 PF08220 DeoR-like helix-turn-helix domain M654_004320 PF00455 DeoR C terminal sensor domain M654_004325 PF01965 DJ-1/PfpI family M654_004330 PF02583 Metal-sensitive transcriptional repressor M654_004335 PF00403 Heavy-metal-associated domain M654_004340 PF00403 Heavy-metal-associated domain M654_004345 PF01297 Zinc-uptake complex component A periplasmic M654_004350 PF00950 ABC 3 transport family M654_004355 PF00005 ABC transporter M654_004360 PF14310 Fibronectin type III-like domain M654_004360 PF07691 PA14 domain M654_004360 PF01915 Glycosyl hydrolase family 3 C-terminal domain M654_004360 PF00933 Glycosyl hydrolase family 3 N terminal domain M654_004365 PF13802 Galactose mutarotase-like M654_004365 PF01055 Glycosyl hydrolases family 31 M654_004370 PF00528 Binding-protein-dependent transport system inner membrane component M654_004375 PF00528 Binding-protein-dependent transport system inner membrane component M654_004380 PF13416 Bacterial extracellular solute-binding protein M654_004385 PF00403 Heavy-metal-associated domain M654_004390 PF13462 Thioredoxin M654_004395 PF02600 Disulfide bond formation protein DsbB M654_004415 PF04229 GrpB protein M654_004420 PF03458 UPF0126 domain M654_004430 PF13538 UvrD-like helicase C-terminal domain M654_004440 PF00266 Aminotransferase class-V M654_004445 PF00999 Sodium/hydrogen exchanger family M654_004450 PF00480 ROK family M654_004455 PF00248 Aldo/keto reductase family M654_004460 PF07690 Major Facilitator Superfamily M654_004465 PF00884 Sulfatase M654_004475 PF09575 Small spore protein J (Spore_SspJ) M654_004480 PF13520 Amino acid permease M654_004485 PF01032 FecCD transport family M654_004490 PF01032 FecCD transport family M654_004495 PF00005 ABC transporter M654_004500 PF00486 Transcriptional regulatory protein, C terminal M654_004500 PF00072 Response regulator receiver domain M654_004510 PF02614 Glucuronate isomerase M654_004520 PF00356 Bacterial regulatory proteins, lacI family M654_004525 PF08125 Mannitol dehydrogenase C-terminal domain M654_004525 PF01232 Mannitol dehydrogenase Rossmann domain M654_004530 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M654_004530 PF08666 SAF domain M654_004535 PF00295 Glycosyl hydrolases family 28 M654_004540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_004540 PF03466 LysR substrate binding domain M654_004545 PF03475 3-alpha domain M654_004545 PF03473 MOSC domain M654_004550 PF00106 short chain dehydrogenase M654_004555 PF00392 Bacterial regulatory proteins, gntR family M654_004555 PF07729 FCD domain M654_004560 PF01497 Periplasmic binding protein M654_004565 PF01032 FecCD transport family M654_004570 PF00005 ABC transporter M654_004575 PF00701 Dihydrodipicolinate synthetase family M654_004580 PF00465 Iron-containing alcohol dehydrogenase M654_004595 PF00158 Sigma-54 interaction domain M654_004595 PF02954 Bacterial regulatory protein, Fis family M654_004595 PF00072 Response regulator receiver domain M654_004600 PF17042 Nucleotide-binding C-terminal domain M654_004600 PF07005 Sugar-binding N-terminal domain M654_004605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M654_004615 PF01923 Cobalamin adenosyltransferase M654_004620 PF01095 Pectinesterase M654_004630 PF04012 PspA/IM30 family M654_004640 PF09922 Cell wall-active antibiotics response 4TMS YvqF M654_004645 PF07730 Histidine kinase M654_004645 PF00672 HAMP domain M654_004645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_004650 PF00196 Bacterial regulatory proteins, luxR family M654_004650 PF00072 Response regulator receiver domain M654_004660 PF05504 Spore germination B3/ GerAC like, C-terminal M654_004665 PF03845 Spore germination protein M654_004670 PF03323 Bacillus/Clostridium GerA spore germination protein M654_004675 PF13113 Protein of unknown function (DUF3970) M654_004680 PF10415 Fumarase C C-terminus M654_004680 PF00206 Lyase M654_004685 PF00440 Bacterial regulatory proteins, tetR family M654_004690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_004690 PF00672 HAMP domain M654_004690 PF00512 His Kinase A (phospho-acceptor) domain M654_004695 PF00486 Transcriptional regulatory protein, C terminal M654_004695 PF00072 Response regulator receiver domain M654_004700 PF13180 PDZ domain M654_004705 PF00210 Ferritin-like domain M654_004710 PF00106 short chain dehydrogenase M654_004715 PF07943 Penicillin-binding protein 5, C-terminal domain M654_004715 PF00768 D-alanyl-D-alanine carboxypeptidase M654_004725 PF14039 YusW-like protein M654_004730 PF01497 Periplasmic binding protein M654_004735 PF01032 FecCD transport family M654_004740 PF01032 FecCD transport family M654_004745 PF00005 ABC transporter M654_004755 PF10835 Protein of unknown function (DUF2573) M654_004760 PF07875 Coat F domain M654_004770 PF14115 YuzL-like protein M654_004775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M654_004775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M654_004775 PF00378 Enoyl-CoA hydratase/isomerase M654_004780 PF00108 Thiolase, N-terminal domain M654_004780 PF02803 Thiolase, C-terminal domain M654_004785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M654_004785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M654_004785 PF02770 Acyl-CoA dehydrogenase, middle domain M654_004790 PF03960 ArsC family M654_004795 PF01597 Glycine cleavage H-protein M654_004800 PF10830 Protein of unknown function (DUF2553) M654_004805 PF01751 Toprim domain M654_004810 PF00085 Thioredoxin M654_004815 PF02036 SCP-2 sterol transfer family M654_004820 PF09383 NIL domain M654_004820 PF00005 ABC transporter M654_004825 PF00528 Binding-protein-dependent transport system inner membrane component M654_004830 PF03180 NLPA lipoprotein M654_004835 PF02627 Carboxymuconolactone decarboxylase family M654_004840 PF01545 Cation efflux family M654_004840 PF16916 Dimerisation domain of Zinc Transporter M654_004845 PF00005 ABC transporter M654_004850 PF01458 Uncharacterized protein family (UPF0051) M654_004855 PF00266 Aminotransferase class-V M654_004860 PF01592 NifU-like N terminal domain M654_004865 PF01458 Uncharacterized protein family (UPF0051) M654_004885 PF01266 FAD dependent oxidoreductase M654_004900 PF01380 SIS domain M654_004905 PF01547 Bacterial extracellular solute-binding protein M654_004910 PF00528 Binding-protein-dependent transport system inner membrane component M654_004915 PF00528 Binding-protein-dependent transport system inner membrane component M654_004920 PF00294 pfkB family carbohydrate kinase M654_004925 PF00392 Bacterial regulatory proteins, gntR family M654_004925 PF07702 UTRA domain M654_004930 PF04231 Endonuclease I M654_004940 PF03606 C4-dicarboxylate anaerobic carrier M654_004950 PF13556 PucR C-terminal helix-turn-helix domain M654_004950 PF07905 Purine catabolism regulatory protein-like family M654_004950 PF17853 GGDEF-like domain M654_004955 PF01546 Peptidase family M20/M25/M40 M654_004960 PF00266 Aminotransferase class-V M654_004965 PF01979 Amidohydrolase family M654_004970 PF13977 BetI-type transcriptional repressor, C-terminal M654_004970 PF00440 Bacterial regulatory proteins, tetR family M654_004980 PF01904 Protein of unknown function DUF72 M654_004985 PF01925 Sulfite exporter TauE/SafE M654_004990 PF02872 5'-nucleotidase, C-terminal domain M654_004995 PF08827 Domain of unknown function (DUF1805) M654_005000 PF09560 Sporulation protein YunB (Spo_YunB) M654_005005 PF00209 Sodium:neurotransmitter symporter family M654_005015 PF01551 Peptidase family M23 M654_005020 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M654_005020 PF04055 Radical SAM superfamily M654_005025 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M654_005030 PF06265 Protein of unknown function (DUF1027) M654_005035 PF01934 Protein of unknown function DUF86 M654_005040 PF13344 Haloacid dehalogenase-like hydrolase M654_005055 PF04608 Phosphatidylglycerophosphatase A M654_005065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M654_005065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M654_005070 PF01842 ACT domain M654_005070 PF00742 Homoserine dehydrogenase M654_005070 PF03447 Homoserine dehydrogenase, NAD binding domain M654_005075 PF00291 Pyridoxal-phosphate dependent enzyme M654_005080 PF00288 GHMP kinases N terminal domain M654_005080 PF08544 GHMP kinases C terminal M654_005085 PF00326 Prolyl oligopeptidase family M654_005085 PF07676 WD40-like Beta Propeller Repeat M654_005090 PF01106 NifU-like domain M654_005095 PF07315 Protein of unknown function (DUF1462) M654_005105 PF05870 Phenolic acid decarboxylase (PAD) M654_005110 PF18801 response regulator aspartate phosphatase H, N terminal M654_005120 PF01738 Dienelactone hydrolase family M654_005125 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_005130 PF07293 Protein of unknown function (DUF1450) M654_005135 PF01773 Na+ dependent nucleoside transporter N-terminus M654_005135 PF07662 Na+ dependent nucleoside transporter C-terminus M654_005140 PF01678 Diaminopimelate epimerase M654_005145 PF01521 Iron-sulphur cluster biosynthesis M654_005150 PF00583 Acetyltransferase (GNAT) family M654_005155 PF14169 Cold-inducible protein YdjO M654_005165 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_005170 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_005175 PF17302 Family of unknown function (DUF5351) M654_005180 PF14068 Putative membrane protein M654_005185 PF06725 3D domain M654_005190 PF02681 Divergent PAP2 family M654_005195 PF00883 Cytosol aminopeptidase family, catalytic domain M654_005195 PF02789 Cytosol aminopeptidase family, N-terminal domain M654_005200 PF13726 Na+-H+ antiporter family M654_005200 PF03553 Na+/H+ antiporter family M654_005205 PF02632 BioY family M654_005210 PF00174 Oxidoreductase molybdopterin binding domain M654_005215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M654_005215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M654_005220 PF13556 PucR C-terminal helix-turn-helix domain M654_005220 PF17853 GGDEF-like domain M654_005220 PF06018 CodY GAF-like domain M654_005225 PF01235 Sodium:alanine symporter family M654_005230 PF06013 Proteins of 100 residues with WXG M654_005235 PF08817 WXG100 protein secretion system (Wss), protein YukD M654_005240 PF10140 WXG100 protein secretion system (Wss), protein YukC M654_005245 PF01580 FtsK/SpoIIIE family M654_005245 PF12538 DNA transporter M654_005255 PF17355 Family of unknown function (DUF5383) M654_005260 PF00106 short chain dehydrogenase M654_005265 PF01966 HD domain M654_005275 PF01594 AI-2E family transporter M654_005285 PF14166 YueH-like protein M654_005290 PF07997 Protein of unknown function (DUF1694) M654_005295 PF00857 Isochorismatase family M654_005300 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain M654_005300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M654_005300 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M654_005305 PF00563 EAL domain M654_005305 PF08668 HDOD domain M654_005315 PF08181 DegQ (SacQ) family M654_005320 PF00348 Polyprenyl synthetase M654_005325 PF05952 Bacillus competence pheromone ComX M654_005330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_005330 PF07730 Histidine kinase M654_005335 PF00196 Bacterial regulatory proteins, luxR family M654_005335 PF00072 Response regulator receiver domain M654_005340 PF03061 Thioesterase superfamily M654_005345 PF03334 Na+/H+ antiporter subunit M654_005350 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M654_005355 PF01899 Na+/H+ ion antiporter subunit M654_005360 PF00361 Proton-conducting membrane transporter M654_005365 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M654_005370 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M654_005375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M654_005375 PF00361 Proton-conducting membrane transporter M654_005375 PF13244 Domain of unknown function (DUF4040) M654_005385 PF03390 2-hydroxycarboxylate transporter family M654_005390 PF02666 Phosphatidylserine decarboxylase M654_005395 PF09335 SNARE associated Golgi protein M654_005400 PF01066 CDP-alcohol phosphatidyltransferase M654_005405 PF00072 Response regulator receiver domain M654_005410 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M654_005410 PF17203 Single cache domain 3 M654_005410 PF00989 PAS fold M654_005410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_005415 PF17328 Family of unknown function (DUF5366) M654_005420 PF04134 Protein of unknown function, DUF393 M654_005425 PF00905 Penicillin binding protein transpeptidase domain M654_005425 PF00912 Transglycosylase M654_005430 PF07690 Major Facilitator Superfamily M654_005435 PF00929 Exonuclease M654_005440 PF08810 Kinase associated protein B M654_005450 PF00155 Aminotransferase class I and II M654_005460 PF08958 Domain of unknown function (DUF1871) M654_005465 PF08386 TAP-like protein M654_005465 PF00561 alpha/beta hydrolase fold M654_005470 PF01037 Lrp/AsnC ligand binding domain M654_005475 PF00155 Aminotransferase class I and II M654_005480 PF00575 S1 RNA binding domain M654_005485 PF04070 Domain of unknown function (DUF378) M654_005490 PF00465 Iron-containing alcohol dehydrogenase M654_005495 PF00342 Phosphoglucose isomerase M654_005500 PF13302 Acetyltransferase (GNAT) domain M654_005510 PF04239 Protein of unknown function (DUF421) M654_005515 PF08868 YugN-like family M654_005520 PF07885 Ion channel M654_005520 PF02254 TrkA-N domain M654_005525 PF11458 Membrane-integrating protein Mistic M654_005530 PF04298 Putative neutral zinc metallopeptidase M654_005535 PF01595 Cyclin M transmembrane N-terminal domain M654_005535 PF03471 Transporter associated domain M654_005535 PF00571 CBS domain M654_005540 PF01670 Glycosyl hydrolase family 12 M654_005545 PF00128 Alpha amylase, catalytic domain M654_005545 PF16657 Maltogenic Amylase, C-terminal domain M654_005550 PF01894 Uncharacterised protein family UPF0047 M654_005555 PF03060 Nitronate monooxygenase M654_005565 PF00672 HAMP domain M654_005565 PF02743 Cache domain M654_005565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_005570 PF02743 Cache domain M654_005570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_005570 PF00672 HAMP domain M654_005575 PF02743 Cache domain M654_005575 PF00672 HAMP domain M654_005575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_005580 PF01965 DJ-1/PfpI family M654_005585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M654_005585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M654_005590 PF01594 AI-2E family transporter M654_005595 PF02673 Bacitracin resistance protein BacA M654_005600 PF00149 Calcineurin-like phosphoesterase M654_005610 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase M654_005625 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) M654_005675 PF03747 ADP-ribosylglycohydrolase M654_005685 PF00589 Phage integrase family M654_005685 PF02899 Phage integrase, N-terminal SAM-like domain M654_005810 PF01367 5'-3' exonuclease, C-terminal SAM fold M654_005810 PF00476 DNA polymerase family A M654_005810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M654_005810 PF01612 3'-5' exonuclease M654_005830 PF02075 Crossover junction endodeoxyribonuclease RuvC M654_005865 PF07972 NrdI Flavodoxin like M654_005870 PF02867 Ribonucleotide reductase, barrel domain M654_005870 PF00317 Ribonucleotide reductase, all-alpha domain M654_005870 PF08343 Ribonucleotide reductase N-terminal M654_005885 PF13392 HNH endonuclease M654_005895 PF00692 dUTPase M654_005905 PF02511 Thymidylate synthase complementing protein M654_005910 PF06725 3D domain M654_005935 PF00145 C-5 cytosine-specific DNA methylase M654_005980 PF01068 ATP dependent DNA ligase domain M654_006025 PF00589 Phage integrase family M654_006135 PF01471 Putative peptidoglycan binding domain M654_006135 PF01476 LysM domain M654_006135 PF01510 N-acetylmuramoyl-L-alanine amidase M654_006160 PF08863 YolD-like protein M654_006180 PF00398 Ribosomal RNA adenine dimethylase M654_006185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_006195 PF10042 Uncharacterized conserved protein (DUF2278) M654_006210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M654_006215 PF07451 Stage V sporulation protein AD (SpoVAD) M654_006220 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M654_006230 PF04239 Protein of unknown function (DUF421) M654_006235 PF04239 Protein of unknown function (DUF421) M654_006240 PF04294 VanW like protein M654_006245 PF04072 Leucine carboxyl methyltransferase M654_006260 PF00171 Aldehyde dehydrogenase family M654_006265 PF00465 Iron-containing alcohol dehydrogenase M654_006275 PF12867 DinB superfamily M654_006285 PF02386 Cation transport protein M654_006290 PF02080 TrkA-C domain M654_006290 PF02254 TrkA-N domain M654_006295 PF01470 Pyroglutamyl peptidase M654_006300 PF18801 response regulator aspartate phosphatase H, N terminal M654_006315 PF04203 Sortase domain M654_006320 PF09515 Thiamine transporter protein (Thia_YuaJ) M654_006325 PF00392 Bacterial regulatory proteins, gntR family M654_006330 PF07441 SigmaK-factor processing regulatory protein BofA M654_006335 PF10704 Protein of unknown function (DUF2508) M654_006490 PF00005 ABC transporter M654_006490 PF13732 Domain of unknown function (DUF4162) M654_006500 PF05656 Protein of unknown function (DUF805) M654_006505 PF18801 response regulator aspartate phosphatase H, N terminal M654_006515 PF01487 Type I 3-dehydroquinase M654_006520 PF07070 SpoOM protein M654_006525 PF13667 ThiC-associated domain M654_006525 PF01964 Radical SAM ThiC family M654_006530 PF00005 ABC transporter M654_006535 PF09084 NMT1/THI5 like M654_006540 PF00528 Binding-protein-dependent transport system inner membrane component M654_006545 PF00296 Luciferase-like monooxygenase M654_006555 PF01381 Helix-turn-helix M654_006565 PF13732 Domain of unknown function (DUF4162) M654_006565 PF00005 ABC transporter M654_006585 PF00253 Ribosomal protein S14p/S29e M654_006600 PF08331 Domain of unknown function (DUF1730) M654_006605 PF12671 Putative amidase domain M654_006610 PF00588 SpoU rRNA Methylase family M654_006615 PF13171 Protein of unknown function (DUF4004) M654_006620 PF04519 Polymer-forming cytoskeletal M654_006625 PF04519 Polymer-forming cytoskeletal M654_006630 PF06798 PrkA serine protein kinase C-terminal domain M654_006630 PF08298 PrkA AAA domain M654_006635 PF04285 Protein of unknown function (DUF444) M654_006645 PF07690 Major Facilitator Superfamily M654_006650 PF03358 NADPH-dependent FMN reductase M654_006665 PF00392 Bacterial regulatory proteins, gntR family M654_006670 PF00005 ABC transporter M654_006675 PF00005 ABC transporter M654_006680 PF12679 ABC-2 family transporter protein M654_006685 PF00313 'Cold-shock' DNA-binding domain M654_006690 PF00375 Sodium:dicarboxylate symporter family M654_006700 PF00326 Prolyl oligopeptidase family M654_006705 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M654_006715 PF07875 Coat F domain M654_006725 PF13426 PAS domain M654_006725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_006725 PF00512 His Kinase A (phospho-acceptor) domain M654_006725 PF00989 PAS fold M654_006725 PF13188 PAS domain M654_006730 PF00149 Calcineurin-like phosphoesterase M654_006730 PF00565 Staphylococcal nuclease homologue M654_006730 PF02872 5'-nucleotidase, C-terminal domain M654_006730 PF00746 LPXTG cell wall anchor motif M654_006735 PF04203 Sortase domain M654_006740 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_006745 PF01380 SIS domain M654_006750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M654_006755 PF08669 Glycine cleavage T-protein C-terminal barrel domain M654_006755 PF01571 Aminomethyltransferase folate-binding domain M654_006755 PF16350 FAD dependent oxidoreductase central domain M654_006755 PF01266 FAD dependent oxidoreductase M654_006760 PF01266 FAD dependent oxidoreductase M654_006765 PF00355 Rieske [2Fe-2S] domain M654_006765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M654_006770 PF00005 ABC transporter M654_006770 PF00571 CBS domain M654_006775 PF00528 Binding-protein-dependent transport system inner membrane component M654_006795 PF01638 HxlR-like helix-turn-helix M654_006800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M654_006800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M654_006805 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M654_006805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M654_006815 PF01479 S4 domain M654_006815 PF00849 RNA pseudouridylate synthase M654_006820 PF17326 Family of unknown function (DUF5365) M654_006825 PF00571 CBS domain M654_006830 PF13419 Haloacid dehalogenase-like hydrolase M654_006835 PF00583 Acetyltransferase (GNAT) family M654_006835 PF00795 Carbon-nitrogen hydrolase M654_006840 PF12848 ABC transporter M654_006840 PF16326 ABC transporter C-terminal domain M654_006840 PF00005 ABC transporter M654_006855 PF04309 Glycerol-3-phosphate responsive antiterminator M654_006860 PF00230 Major intrinsic protein M654_006865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M654_006865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M654_006870 PF01266 FAD dependent oxidoreductase M654_006870 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M654_006875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M654_006875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M654_006875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M654_006875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M654_006890 PF07730 Histidine kinase M654_006890 PF13185 GAF domain M654_006895 PF00072 Response regulator receiver domain M654_006895 PF00196 Bacterial regulatory proteins, luxR family M654_006900 PF03358 NADPH-dependent FMN reductase M654_006905 PF14148 YhdB-like protein M654_006910 PF13028 Protein of unknown function (DUF3889) M654_006915 PF02082 Transcriptional regulator M654_006920 PF00175 Oxidoreductase NAD-binding domain M654_006920 PF00042 Globin M654_006920 PF00970 Oxidoreductase FAD-binding domain M654_006925 PF04293 SpoVR like protein M654_006930 PF00877 NlpC/P60 family M654_006930 PF01476 LysM domain M654_006935 PF03466 LysR substrate binding domain M654_006935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_006940 PF00285 Citrate synthase, C-terminal domain M654_006945 PF00209 Sodium:neurotransmitter symporter family M654_006955 PF12833 Helix-turn-helix domain M654_006955 PF06445 GyrI-like small molecule binding domain M654_006960 PF00392 Bacterial regulatory proteins, gntR family M654_006960 PF00155 Aminotransferase class I and II M654_006965 PF00583 Acetyltransferase (GNAT) family M654_006970 PF17453 Sigma-M inhibitor M654_006975 PF13800 Sigma factor regulator N-terminal M654_006975 PF13791 Sigma factor regulator C-terminal M654_006980 PF04542 Sigma-70 region 2 M654_006980 PF08281 Sigma-70, region 4 M654_006990 PF01553 Acyltransferase M654_007000 PF00440 Bacterial regulatory proteins, tetR family M654_007005 PF05656 Protein of unknown function (DUF805) M654_007010 PF01595 Cyclin M transmembrane N-terminal domain M654_007010 PF03471 Transporter associated domain M654_007010 PF00571 CBS domain M654_007015 PF13411 MerR HTH family regulatory protein M654_007020 PF00571 CBS domain M654_007020 PF01595 Cyclin M transmembrane N-terminal domain M654_007020 PF03471 Transporter associated domain M654_007035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M654_007040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M654_007045 PF03009 Glycerophosphoryl diester phosphodiesterase family M654_007050 PF17444 Uncharacterized YhdX-like M654_007055 PF00924 Mechanosensitive ion channel M654_007060 PF02146 Sir2 family M654_007075 PF01522 Polysaccharide deacetylase M654_007080 PF01063 Amino-transferase class IV M654_007085 PF03553 Na+/H+ antiporter family M654_007090 PF01263 Aldose 1-epimerase M654_007095 PF16302 Domain of unknown function (DUF4944) M654_007115 PF00582 Universal stress protein family M654_007120 PF00664 ABC transporter transmembrane region M654_007120 PF00005 ABC transporter M654_007125 PF00664 ABC transporter transmembrane region M654_007125 PF00005 ABC transporter M654_007130 PF13460 NAD(P)H-binding M654_007135 PF00269 Small, acid-soluble spore proteins, alpha/beta type M654_007145 PF03459 TOBE domain M654_007145 PF17912 MalK OB fold domain M654_007145 PF00005 ABC transporter M654_007150 PF13556 PucR C-terminal helix-turn-helix domain M654_007155 PF17277 Family of unknown function (DUF5342) M654_007160 PF14398 YheC/D like ATP-grasp M654_007165 PF14398 YheC/D like ATP-grasp M654_007180 PF04286 Protein of unknown function (DUF445) M654_007185 PF06133 Control of competence regulator ComK, YlbF/YmcA M654_007195 PF04055 Radical SAM superfamily M654_007200 PF00378 Enoyl-CoA hydratase/isomerase M654_007205 PF18801 response regulator aspartate phosphatase H, N terminal M654_007215 PF14120 YhzD-like protein M654_007220 PF00005 ABC transporter M654_007220 PF13732 Domain of unknown function (DUF4162) M654_007230 PF00149 Calcineurin-like phosphoesterase M654_007235 PF13514 AAA domain M654_007240 PF01966 HD domain M654_007245 PF14147 Sporulation protein YhaL M654_007255 PF09680 Family of unknown function M654_007270 PF11667 Putative zincin peptidase M654_007275 PF08963 Protein of unknown function (DUF1878) M654_007280 PF01047 MarR family M654_007285 PF12732 YtxH-like protein M654_007295 PF17099 Tryptophan transporter TrpP M654_007300 PF00266 Aminotransferase class-V M654_007305 PF01230 HIT domain M654_007310 PF00005 ABC transporter M654_007315 PF05975 Bacterial ABC transporter protein EcsB M654_007320 PF12787 EcsC protein family M654_007325 PF07687 Peptidase dimerisation domain M654_007325 PF01546 Peptidase family M20/M25/M40 M654_007335 PF03992 Antibiotic biosynthesis monooxygenase M654_007340 PF00905 Penicillin binding protein transpeptidase domain M654_007340 PF00912 Transglycosylase M654_007345 PF01208 Uroporphyrinogen decarboxylase (URO-D) M654_007360 PF00440 Bacterial regulatory proteins, tetR family M654_007360 PF17932 Tetracyclin repressor-like, C-terminal domain M654_007370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M654_007370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M654_007375 PF05343 M42 glutamyl aminopeptidase M654_007385 PF00375 Sodium:dicarboxylate symporter family M654_007390 PF14149 YhfH-like protein M654_007395 PF12706 Beta-lactamase superfamily domain M654_007400 PF03099 Biotin/lipoate A/B protein ligase family M654_007400 PF10437 Bacterial lipoate protein ligase C-terminus M654_007405 PF13193 AMP-binding enzyme C-terminal domain M654_007405 PF00501 AMP-binding enzyme M654_007415 PF01381 Helix-turn-helix M654_007415 PF07883 Cupin domain M654_007430 PF01435 Peptidase family M48 M654_007430 PF16491 CAAX prenyl protease N-terminal, five membrane helices M654_007435 PF05922 Peptidase inhibitor I9 M654_007435 PF00082 Subtilase family M654_007440 PF00892 EamA-like transporter family M654_007445 PF01497 Periplasmic binding protein M654_007450 PF01032 FecCD transport family M654_007455 PF01032 FecCD transport family M654_007460 PF00300 Histidine phosphatase superfamily (branch 1) M654_007465 PF00108 Thiolase, N-terminal domain M654_007465 PF02803 Thiolase, C-terminal domain M654_007470 PF00501 AMP-binding enzyme M654_007470 PF13193 AMP-binding enzyme C-terminal domain M654_007475 PF02632 BioY family M654_007480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_007485 PF01266 FAD dependent oxidoreductase M654_007485 PF00355 Rieske [2Fe-2S] domain M654_007495 PF08858 IDEAL domain M654_007500 PF06338 ComK protein M654_007510 PF09335 SNARE associated Golgi protein M654_007515 PF10502 Signal peptidase, peptidase S26 M654_007520 PF00082 Subtilase family M654_007525 PF18801 response regulator aspartate phosphatase H, N terminal M654_007535 PF00356 Bacterial regulatory proteins, lacI family M654_007540 PF01547 Bacterial extracellular solute-binding protein M654_007545 PF00528 Binding-protein-dependent transport system inner membrane component M654_007550 PF00528 Binding-protein-dependent transport system inner membrane component M654_007555 PF11975 Family 4 glycosyl hydrolase C-terminal domain M654_007555 PF02056 Family 4 glycosyl hydrolase M654_007560 PF05145 Transition state regulatory protein AbrB M654_007565 PF11007 Spore coat associated protein JA (CotJA) M654_007570 PF12652 CotJB protein M654_007575 PF05067 Manganese containing catalase M654_007580 PF13193 AMP-binding enzyme C-terminal domain M654_007580 PF00501 AMP-binding enzyme M654_007585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M654_007585 PF12793 Sugar transport-related sRNA regulator N-term M654_007595 PF13426 PAS domain M654_007595 PF00672 HAMP domain M654_007595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_007595 PF00512 His Kinase A (phospho-acceptor) domain M654_007600 PF00072 Response regulator receiver domain M654_007600 PF00486 Transcriptional regulatory protein, C terminal M654_007605 PF02915 Rubrerythrin M654_007615 PF00528 Binding-protein-dependent transport system inner membrane component M654_007620 PF12705 PD-(D/E)XK nuclease superfamily M654_007625 PF12705 PD-(D/E)XK nuclease superfamily M654_007625 PF00580 UvrD/REP helicase N-terminal domain M654_007625 PF13361 UvrD-like helicase C-terminal domain M654_007630 PF12320 Type 5 capsule protein repressor C-terminal domain M654_007630 PF00149 Calcineurin-like phosphoesterase M654_007635 PF13476 AAA domain M654_007640 PF10676 Spore germination protein gerPA/gerPF M654_007645 PF10970 Spore germination protein GerPE M654_007655 PF10737 Spore germination protein GerPC M654_007660 PF10803 Spore germination GerPB M654_007665 PF10676 Spore germination protein gerPA/gerPF M654_007670 PF12650 Domain of unknown function (DUF3784) M654_007675 PF09388 Spo0E like sporulation regulatory protein M654_007680 PF08757 CotH kinase protein M654_007690 PF01557 Fumarylacetoacetate (FAA) hydrolase family M654_007695 PF03193 RsgA GTPase M654_007700 PF07457 Protein of unknown function (DUF1516) M654_007705 PF10949 Protein of unknown function (DUF2777) M654_007710 PF13537 Glutamine amidotransferase domain M654_007710 PF00733 Asparagine synthase M654_007715 PF00909 Ammonium Transporter Family M654_007720 PF00543 Nitrogen regulatory protein P-II M654_007725 PF01554 MatE M654_007730 PF12833 Helix-turn-helix domain M654_007730 PF02311 AraC-like ligand binding domain M654_007750 PF03323 Bacillus/Clostridium GerA spore germination protein M654_007755 PF01810 LysE type translocator M654_007760 PF00392 Bacterial regulatory proteins, gntR family M654_007760 PF00155 Aminotransferase class I and II M654_007765 PF00202 Aminotransferase class-III M654_007770 PF00282 Pyridoxal-dependent decarboxylase conserved domain M654_007775 PF06276 Ferric iron reductase FhuF-like transporter M654_007775 PF04183 IucA / IucC family M654_007785 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M654_007790 PF04183 IucA / IucC family M654_007790 PF06276 Ferric iron reductase FhuF-like transporter M654_007795 PF13673 Acetyltransferase (GNAT) domain M654_007810 PF02965 Vitamin B12 dependent methionine synthase, activation domain M654_007810 PF00809 Pterin binding enzyme M654_007810 PF02310 B12 binding domain M654_007810 PF02607 B12 binding domain M654_007810 PF02574 Homocysteine S-methyltransferase M654_007815 PF02219 Methylenetetrahydrofolate reductase M654_007815 PF02574 Homocysteine S-methyltransferase M654_007820 PF04461 Protein of unknown function (DUF520) M654_007825 PF17783 CvfB-like winged helix domain M654_007825 PF13509 S1 domain M654_007840 PF02645 Uncharacterised protein, DegV family COG1307 M654_007845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M654_007845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M654_007850 PF12690 Intracellular proteinase inhibitor M654_007855 PF00478 IMP dehydrogenase / GMP reductase domain M654_007860 PF12758 Protein of unknown function (DUF3813) M654_007870 PF00326 Prolyl oligopeptidase family M654_007875 PF01883 Iron-sulfur cluster assembly protein M654_007885 PF01118 Semialdehyde dehydrogenase, NAD binding domain M654_007885 PF02774 Semialdehyde dehydrogenase, dimerisation domain M654_007890 PF01960 ArgJ family M654_007895 PF00696 Amino acid kinase family M654_007900 PF00202 Aminotransferase class-III M654_007905 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M654_007905 PF00117 Glutamine amidotransferase class-I M654_007910 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M654_007910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M654_007915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M654_007915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M654_007920 PF02673 Bacitracin resistance protein BacA M654_007925 PF14168 YjzC-like protein M654_007930 PF11151 Protein of unknown function (DUF2929) M654_007945 PF02608 ABC transporter substrate-binding protein PnrA-like M654_007950 PF10815 ComZ M654_007960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M654_007960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M654_007965 PF00109 Beta-ketoacyl synthase, N-terminal domain M654_007965 PF02801 Beta-ketoacyl synthase, C-terminal domain M654_007970 PF10026 Predicted Zn-dependent protease (DUF2268) M654_007975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_007975 PF00005 ABC transporter M654_007980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_007980 PF00005 ABC transporter M654_007985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M654_007990 PF00528 Binding-protein-dependent transport system inner membrane component M654_007995 PF00528 Binding-protein-dependent transport system inner membrane component M654_007995 PF12911 N-terminal TM domain of oligopeptide transport permease C M654_008000 PF12227 Protein of unknown function (DUF3603) M654_008005 PF00579 tRNA synthetases class I (W and Y) M654_008015 PF00528 Binding-protein-dependent transport system inner membrane component M654_008020 PF12911 N-terminal TM domain of oligopeptide transport permease C M654_008020 PF00528 Binding-protein-dependent transport system inner membrane component M654_008025 PF00005 ABC transporter M654_008025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_008030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_008030 PF00005 ABC transporter M654_008035 PF13508 Acetyltransferase (GNAT) domain M654_008040 PF03960 ArsC family M654_008045 PF03741 Integral membrane protein TerC family M654_008055 PF05389 Negative regulator of genetic competence (MecA) M654_008060 PF01270 Glycosyl hydrolases family 8 M654_008075 PF01970 Tripartite tricarboxylate transporter TctA family M654_008080 PF00072 Response regulator receiver domain M654_008080 PF12431 Transcriptional regulator M654_008085 PF00989 PAS fold M654_008085 PF17203 Single cache domain 3 M654_008085 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M654_008085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_008090 PF06054 Competence protein CoiA-like family M654_008095 PF01432 Peptidase family M3 M654_008095 PF08439 Oligopeptidase F M654_008105 PF01152 Bacterial-like globin M654_008110 PF01464 Transglycosylase SLT domain M654_008115 PF01928 CYTH domain M654_008125 PF04607 Region found in RelA / SpoT proteins M654_008130 PF01513 ATP-NAD kinase M654_008135 PF00849 RNA pseudouridylate synthase M654_008140 PF00149 Calcineurin-like phosphoesterase M654_008145 PF02080 TrkA-C domain M654_008145 PF02254 TrkA-N domain M654_008145 PF00999 Sodium/hydrogen exchanger family M654_008150 PF03070 TENA/THI-4/PQQC family M654_008155 PF02581 Thiamine monophosphate synthase M654_008160 PF01266 FAD dependent oxidoreductase M654_008165 PF02597 ThiS family M654_008170 PF05690 Thiazole biosynthesis protein ThiG M654_008175 PF00899 ThiF family M654_008180 PF08543 Phosphomethylpyrimidine kinase M654_008190 PF14153 Spore coat protein CotO M654_008195 PF10612 Spore coat protein Z M654_008200 PF10612 Spore coat protein Z M654_008205 PF07552 Spore Coat Protein X and V domain M654_008215 PF07552 Spore Coat Protein X and V domain M654_008220 PF07098 Protein of unknown function (DUF1360) M654_008235 PF14069 Stage VI sporulation protein F M654_008240 PF13361 UvrD-like helicase C-terminal domain M654_008240 PF00580 UvrD/REP helicase N-terminal domain M654_008250 PF09335 SNARE associated Golgi protein M654_008255 PF16363 GDP-mannose 4,6 dehydratase M654_008260 PF00483 Nucleotidyl transferase M654_008265 PF04138 GtrA-like protein M654_008270 PF13673 Acetyltransferase (GNAT) domain M654_008280 PF00756 Putative esterase M654_008295 PF13280 WYL domain M654_008300 PF01053 Cys/Met metabolism PLP-dependent enzyme M654_008305 PF01053 Cys/Met metabolism PLP-dependent enzyme M654_008310 PF05684 Protein of unknown function (DUF819) M654_008330 PF04616 Glycosyl hydrolases family 43 M654_008335 PF14310 Fibronectin type III-like domain M654_008335 PF00933 Glycosyl hydrolase family 3 N terminal domain M654_008335 PF01915 Glycosyl hydrolase family 3 C-terminal domain M654_008345 PF00933 Glycosyl hydrolase family 3 N terminal domain M654_008345 PF14310 Fibronectin type III-like domain M654_008345 PF01915 Glycosyl hydrolase family 3 C-terminal domain M654_008350 PF14310 Fibronectin type III-like domain M654_008350 PF00933 Glycosyl hydrolase family 3 N terminal domain M654_008350 PF01915 Glycosyl hydrolase family 3 C-terminal domain M654_008360 PF00535 Glycosyl transferase family 2 M654_008365 PF03275 UDP-galactopyranose mutase M654_008370 PF00480 ROK family M654_008470 PF00589 Phage integrase family M654_008495 PF00589 Phage integrase family M654_008495 PF14659 Phage integrase, N-terminal SAM-like domain M654_008515 PF01381 Helix-turn-helix M654_008545 PF09466 Hypothetical protein Yqai M654_008585 PF03796 DnaB-like helicase C terminal domain M654_008585 PF00772 DnaB-like helicase N terminal domain M654_008600 PF05866 Endodeoxyribonuclease RusA M654_008635 PF18801 response regulator aspartate phosphatase H, N terminal M654_008640 PF04740 LXG domain of WXG superfamily M654_008640 PF14449 Pre-toxin TG M654_008655 PF01555 DNA methylase M654_008675 PF04466 Phage terminase large subunit M654_008675 PF17288 Terminase RNAseH like domain M654_008685 PF04233 Phage Mu protein F like protein M654_008695 PF14550 Putative phage serine protease XkdF M654_008700 PF05065 Phage capsid family M654_008705 PF14553 YqbF, hypothetical protein domain M654_008710 PF11436 Protein of unknown function (DUF3199) M654_008715 PF12206 Domain of unknown function (DUF3599) M654_008720 PF04883 Bacteriophage HK97-gp10, putative tail-component M654_008735 PF04984 Phage tail sheath protein subtilisin-like domain M654_008735 PF17482 Phage tail sheath C-terminal domain M654_008735 PF17481 Phage tail sheath protein beta-sandwich domain M654_008740 PF09393 Phage tail tube protein M654_008745 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC M654_008755 PF01464 Transglycosylase SLT domain M654_008755 PF01464 Transglycosylase SLT domain M654_008760 PF01476 LysM domain M654_008770 PF10844 Protein of unknown function (DUF2577) M654_008775 PF10934 Protein of unknown function (DUF2634) M654_008780 PF04865 Baseplate J-like protein M654_008785 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) M654_008800 PF09636 XkdW protein M654_008810 PF10779 Haemolysin XhlA M654_008815 PF04688 SPP1 phage holin M654_008820 PF01183 Glycosyl hydrolases family 25 M654_008820 PF08239 Bacterial SH3 domain M654_008850 PF14602 Hexapeptide repeat of succinyl-transferase M654_008850 PF12464 Maltose acetyltransferase M654_008860 PF01261 Xylose isomerase-like TIM barrel M654_008865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M654_008865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M654_008870 PF01040 UbiA prenyltransferase family M654_008875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_008875 PF03466 LysR substrate binding domain M654_008880 PF00667 FAD binding domain M654_008880 PF00258 Flavodoxin M654_008880 PF00175 Oxidoreductase NAD-binding domain M654_008885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M654_008885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M654_008890 PF03466 LysR substrate binding domain M654_008890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_008895 PF00892 EamA-like transporter family M654_008900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_008905 PF16800 IseA DL-endopeptidase inhibitor M654_008910 PF06725 3D domain M654_008910 PF01476 LysM domain M654_008915 PF07690 Major Facilitator Superfamily M654_008920 PF00440 Bacterial regulatory proteins, tetR family M654_008930 PF05908 Poly-gamma-glutamate hydrolase M654_008935 PF06114 IrrE N-terminal-like domain M654_008940 PF01381 Helix-turn-helix M654_008960 PF01695 IstB-like ATP binding protein M654_008970 PF17356 Phage-like element PBSX protein XtrA M654_008975 PF08281 Sigma-70, region 4 M654_008980 PF03592 Terminase small subunit M654_008980 PF10668 Phage terminase small subunit M654_008985 PF04466 Phage terminase large subunit M654_008985 PF17288 Terminase RNAseH like domain M654_008990 PF04860 Phage portal protein M654_008995 PF14550 Putative phage serine protease XkdF M654_009000 PF05065 Phage capsid family M654_009005 PF14553 YqbF, hypothetical protein domain M654_009010 PF11436 Protein of unknown function (DUF3199) M654_009015 PF12206 Domain of unknown function (DUF3599) M654_009020 PF04883 Bacteriophage HK97-gp10, putative tail-component M654_009035 PF17481 Phage tail sheath protein beta-sandwich domain M654_009035 PF17482 Phage tail sheath C-terminal domain M654_009035 PF04984 Phage tail sheath protein subtilisin-like domain M654_009040 PF09393 Phage tail tube protein M654_009045 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC M654_009055 PF01464 Transglycosylase SLT domain M654_009055 PF01464 Transglycosylase SLT domain M654_009060 PF01476 LysM domain M654_009070 PF10844 Protein of unknown function (DUF2577) M654_009075 PF10934 Protein of unknown function (DUF2634) M654_009080 PF04865 Baseplate J-like protein M654_009085 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) M654_009105 PF03009 Glycerophosphoryl diester phosphodiesterase family M654_009115 PF10779 Haemolysin XhlA M654_009120 PF04688 SPP1 phage holin M654_009125 PF01471 Putative peptidoglycan binding domain M654_009125 PF01510 N-acetylmuramoyl-L-alanine amidase M654_009130 PF00392 Bacterial regulatory proteins, gntR family M654_009130 PF07729 FCD domain M654_009135 PF08240 Alcohol dehydrogenase GroES-like domain M654_009135 PF00107 Zinc-binding dehydrogenase M654_009140 PF03786 D-mannonate dehydratase (UxuA) M654_009145 PF00106 short chain dehydrogenase M654_009150 PF08240 Alcohol dehydrogenase GroES-like domain M654_009150 PF00107 Zinc-binding dehydrogenase M654_009155 PF07690 Major Facilitator Superfamily M654_009165 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system M654_009170 PF14171 Toxin SpoIISA, type II toxin-antitoxin system M654_009175 PF01384 Phosphate transporter family M654_009180 PF01865 Protein of unknown function DUF47 M654_009190 PF04854 Protein of unknown function, DUF624 M654_009195 PF02743 Cache domain M654_009195 PF00672 HAMP domain M654_009195 PF06580 Histidine kinase M654_009195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_009200 PF00072 Response regulator receiver domain M654_009200 PF12833 Helix-turn-helix domain M654_009205 PF13416 Bacterial extracellular solute-binding protein M654_009210 PF00528 Binding-protein-dependent transport system inner membrane component M654_009215 PF00528 Binding-protein-dependent transport system inner membrane component M654_009220 PF07470 Glycosyl Hydrolase Family 88 M654_009225 PF12833 Helix-turn-helix domain M654_009230 PF13472 GDSL-like Lipase/Acylhydrolase family M654_009235 PF09224 Domain of unknown function (DUF1961) M654_009240 PF04854 Protein of unknown function, DUF624 M654_009245 PF18370 Rhamnogalacturonan I lyases beta-sheet domain M654_009250 PF13472 GDSL-like Lipase/Acylhydrolase family M654_009255 PF18370 Rhamnogalacturonan I lyases beta-sheet domain M654_009255 PF01839 FG-GAP repeat M654_009265 PF00657 GDSL-like Lipase/Acylhydrolase M654_009270 PF08532 Beta-galactosidase trimerisation domain M654_009270 PF02449 Beta-galactosidase M654_009270 PF08533 Beta-galactosidase C-terminal domain M654_009280 PF01547 Bacterial extracellular solute-binding protein M654_009285 PF00528 Binding-protein-dependent transport system inner membrane component M654_009290 PF00528 Binding-protein-dependent transport system inner membrane component M654_009295 PF13520 Amino acid permease M654_009300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_009305 PF13180 PDZ domain M654_009350 PF01510 N-acetylmuramoyl-L-alanine amidase M654_009350 PF01471 Putative peptidoglycan binding domain M654_009355 PF01510 N-acetylmuramoyl-L-alanine amidase M654_009355 PF01471 Putative peptidoglycan binding domain M654_009375 PF04951 D-aminopeptidase M654_009380 PF00528 Binding-protein-dependent transport system inner membrane component M654_009385 PF00528 Binding-protein-dependent transport system inner membrane component M654_009385 PF12911 N-terminal TM domain of oligopeptide transport permease C M654_009390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_009390 PF00005 ABC transporter M654_009395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M654_009400 PF17676 LD-carboxypeptidase C-terminal domain M654_009400 PF02016 LD-carboxypeptidase N-terminal domain M654_009405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M654_009405 PF13378 Enolase C-terminal domain-like M654_009410 PF00877 NlpC/P60 family M654_009415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_009415 PF00005 ABC transporter M654_009430 PF03061 Thioesterase superfamily M654_009435 PF00544 Pectate lyase M654_009450 PF12867 DinB superfamily M654_009455 PF00893 Small Multidrug Resistance protein M654_009460 PF00893 Small Multidrug Resistance protein M654_009465 PF00551 Formyl transferase M654_009465 PF01842 ACT domain M654_009470 PF00696 Amino acid kinase family M654_009470 PF01472 PUA domain M654_009475 PF00171 Aldehyde dehydrogenase family M654_009480 PF02566 OsmC-like protein M654_009485 PF01047 MarR family M654_009490 PF02566 OsmC-like protein M654_009500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M654_009505 PF00300 Histidine phosphatase superfamily (branch 1) M654_009520 PF01717 Cobalamin-independent synthase, Catalytic domain M654_009520 PF08267 Cobalamin-independent synthase, N-terminal domain M654_009525 PF00082 Subtilase family M654_009530 PF11132 Transcriptional regulator protein (SplA) M654_009535 PF00571 CBS domain M654_009535 PF01769 Divalent cation transporter M654_009535 PF03448 MgtE intracellular N domain M654_009545 PF13411 MerR HTH family regulatory protein M654_009555 PF01047 MarR family M654_009560 PF01068 ATP dependent DNA ligase domain M654_009565 PF02735 Ku70/Ku80 beta-barrel domain M654_009570 PF00990 Diguanylate cyclase, GGDEF domain M654_009570 PF00563 EAL domain M654_009570 PF03707 Bacterial signalling protein N terminal repeat M654_009575 PF09335 SNARE associated Golgi protein M654_009580 PF03741 Integral membrane protein TerC family M654_009585 PF04542 Sigma-70 region 2 M654_009590 PF12791 Anti-sigma factor N-terminus M654_009595 PF00269 Small, acid-soluble spore proteins, alpha/beta type M654_009600 PF08876 Domain of unknown function (DUF1836) M654_009605 PF01435 Peptidase family M48 M654_009610 PF02386 Cation transport protein M654_009615 PF03717 Penicillin-binding Protein dimerisation domain M654_009615 PF00905 Penicillin binding protein transpeptidase domain M654_009615 PF05223 NTF2-like N-terminal transpeptidase domain M654_009625 PF01757 Acyltransferase family M654_009630 PF13426 PAS domain M654_009630 PF00512 His Kinase A (phospho-acceptor) domain M654_009630 PF00989 PAS fold M654_009630 PF13188 PAS domain M654_009630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_009635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M654_009635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M654_009640 PF01008 Initiation factor 2 subunit family M654_009645 PF01636 Phosphotransferase enzyme family M654_009650 PF00795 Carbon-nitrogen hydrolase M654_009655 PF00155 Aminotransferase class I and II M654_009660 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain M654_009660 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain M654_009665 PF00596 Class II Aldolase and Adducin N-terminal domain M654_009670 PF00596 Class II Aldolase and Adducin N-terminal domain M654_009675 PF03079 ARD/ARD' family M654_009680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_009685 PF06803 Protein of unknown function (DUF1232) M654_009700 PF01047 MarR family M654_009705 PF00691 OmpA family M654_009705 PF13677 Membrane MotB of proton-channel complex MotA/MotB M654_009710 PF01618 MotA/TolQ/ExbB proton channel family M654_009715 PF10431 C-terminal, D2-small domain, of ClpB protein M654_009715 PF17871 AAA lid domain M654_009715 PF07724 AAA domain (Cdc48 subfamily) M654_009715 PF00004 ATPase family associated with various cellular activities (AAA) M654_009725 PF06508 Queuosine biosynthesis protein QueC M654_009730 PF01242 6-pyruvoyl tetrahydropterin synthase M654_009735 PF04055 Radical SAM superfamily M654_009740 PF14489 QueF-like protein M654_009770 PF18801 response regulator aspartate phosphatase H, N terminal M654_009785 PF05675 Protein of unknown function (DUF817) M654_009790 PF13443 Cro/C1-type HTH DNA-binding domain M654_009795 PF11188 Protein of unknown function (DUF2975) M654_009820 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) M654_009830 PF07486 Cell Wall Hydrolase M654_009835 PF01943 Polysaccharide biosynthesis protein M654_009840 PF00578 AhpC/TSA family M654_009850 PF01321 Creatinase/Prolidase N-terminal domain M654_009850 PF00557 Metallopeptidase family M24 M654_009860 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M654_009860 PF00356 Bacterial regulatory proteins, lacI family M654_009865 PF03123 CAT RNA binding domain M654_009865 PF00874 PRD domain M654_009870 PF02378 Phosphotransferase system, EIIC M654_009870 PF00367 phosphotransferase system, EIIB M654_009870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M654_009875 PF00381 PTS HPr component phosphorylation site M654_009880 PF00391 PEP-utilising enzyme, mobile domain M654_009880 PF02896 PEP-utilising enzyme, TIM barrel domain M654_009880 PF05524 PEP-utilising enzyme, N-terminal M654_009885 PF11132 Transcriptional regulator protein (SplA) M654_009895 PF00583 Acetyltransferase (GNAT) family M654_009900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_009900 PF00672 HAMP domain M654_009900 PF02743 Cache domain M654_009910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M654_009910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M654_009915 PF00188 Cysteine-rich secretory protein family M654_009920 PF00905 Penicillin binding protein transpeptidase domain M654_009920 PF03717 Penicillin-binding Protein dimerisation domain M654_009925 PF08447 PAS fold M654_009925 PF00989 PAS fold M654_009925 PF00512 His Kinase A (phospho-acceptor) domain M654_009925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_009930 PF00155 Aminotransferase class I and II M654_009940 PF06271 RDD family M654_009950 PF00072 Response regulator receiver domain M654_009950 PF01584 CheW-like domain M654_009955 PF14177 YkyB-like protein M654_009960 PF07690 Major Facilitator Superfamily M654_009965 PF01476 LysM domain M654_009965 PF03734 L,D-transpeptidase catalytic domain M654_009970 PF00149 Calcineurin-like phosphoesterase M654_009970 PF10518 TAT (twin-arginine translocation) pathway signal sequence M654_009980 PF00563 EAL domain M654_009980 PF10388 EAL-domain associated signalling protein domain M654_009985 PF08796 Protein of unknown function (DUF1797) M654_009990 PF04308 Ribonuclease H-like M654_009995 PF14156 Antirepressor AbbA M654_010005 PF03466 LysR substrate binding domain M654_010005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_010010 PF00258 Flavodoxin M654_010020 PF00258 Flavodoxin M654_010025 PF14602 Hexapeptide repeat of succinyl-transferase M654_010025 PF00132 Bacterial transferase hexapeptide (six repeats) M654_010025 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal M654_010030 PF01546 Peptidase family M20/M25/M40 M654_010030 PF07687 Peptidase dimerisation domain M654_010035 PF03698 Uncharacterised protein family (UPF0180) M654_010040 PF00578 AhpC/TSA family M654_010040 PF10417 C-terminal domain of 1-Cys peroxiredoxin M654_010045 PF00578 AhpC/TSA family M654_010060 PF12804 MobA-like NTP transferase domain M654_010065 PF00899 ThiF family M654_010070 PF03454 MoeA C-terminal region (domain IV) M654_010070 PF00994 Probable molybdopterin binding domain M654_010070 PF03453 MoeA N-terminal region (domain I and II) M654_010075 PF03205 Molybdopterin guanine dinucleotide synthesis protein B M654_010080 PF02391 MoaE protein M654_010085 PF02597 ThiS family M654_010095 PF00664 ABC transporter transmembrane region M654_010095 PF00005 ABC transporter M654_010100 PF00005 ABC transporter M654_010100 PF00664 ABC transporter transmembrane region M654_010105 PF04893 Yip1 domain M654_010110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M654_010115 PF00005 ABC transporter M654_010120 PF12704 MacB-like periplasmic core domain M654_010120 PF02687 FtsX-like permease family M654_010125 PF04893 Yip1 domain M654_010130 PF08220 DeoR-like helix-turn-helix domain M654_010130 PF00455 DeoR C terminal sensor domain M654_010135 PF00294 pfkB family carbohydrate kinase M654_010140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_010140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_010145 PF10502 Signal peptidase, peptidase S26 M654_010155 PF12848 ABC transporter M654_010155 PF00005 ABC transporter M654_010165 PF02073 Thermophilic metalloprotease (M29) M654_010170 PF17447 Uncharacterized YkpC-like M654_010180 PF18277 AbrB C-terminal domain M654_010180 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M654_010185 PF00512 His Kinase A (phospho-acceptor) domain M654_010185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_010185 PF00989 PAS fold M654_010190 PF02080 TrkA-C domain M654_010190 PF02254 TrkA-N domain M654_010195 PF01979 Amidohydrolase family M654_010195 PF13382 Adenine deaminase C-terminal domain M654_010200 PF00753 Metallo-beta-lactamase superfamily M654_010200 PF17770 Ribonuclease J C-terminal domain M654_010200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M654_010215 PF01327 Polypeptide deformylase M654_010225 PF10368 Putative cell-wall binding lipoprotein M654_010230 PF00676 Dehydrogenase E1 component M654_010235 PF02779 Transketolase, pyrimidine binding domain M654_010235 PF02780 Transketolase, C-terminal domain M654_010240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M654_010240 PF02817 e3 binding domain M654_010240 PF00364 Biotin-requiring enzyme M654_010245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M654_010245 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_010255 PF13790 SR1 protein M654_010260 PF01276 Orn/Lys/Arg decarboxylase, major domain M654_010260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M654_010265 PF05256 Uncharacterised protein family (UPF0223) M654_010270 PF06335 Protein of unknown function (DUF1054) M654_010280 PF00459 Inositol monophosphatase family M654_010285 PF00583 Acetyltransferase (GNAT) family M654_010300 PF00480 ROK family M654_010305 PF03825 Nucleoside H+ symporter M654_010310 PF17259 Family of unknown function (DUF5325) M654_010320 PF14036 YlaH-like protein M654_010325 PF01047 MarR family M654_010330 PF01494 FAD binding domain M654_010335 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) M654_010340 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M654_010345 PF13638 PIN domain M654_010345 PF02562 PhoH-like protein M654_010355 PF04960 Glutaminase M654_010360 PF07408 Protein of unknown function (DUF1507) M654_010365 PF01098 Cell cycle protein M654_010370 PF02785 Biotin carboxylase C-terminal domain M654_010370 PF00289 Biotin carboxylase, N-terminal domain M654_010370 PF00364 Biotin-requiring enzyme M654_010370 PF02436 Conserved carboxylase domain M654_010370 PF00682 HMGL-like M654_010370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M654_010375 PF02628 Cytochrome oxidase assembly protein M654_010380 PF01040 UbiA prenyltransferase family M654_010385 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M654_010385 PF00034 Cytochrome c M654_010385 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M654_010390 PF00115 Cytochrome C and Quinol oxidase polypeptide I M654_010395 PF00510 Cytochrome c oxidase subunit III M654_010400 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M654_010405 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) M654_010410 PF08868 YugN-like family M654_010415 PF00571 CBS domain M654_010420 PF00188 Cysteine-rich secretory protein family M654_010420 PF14504 CAP-associated N-terminal M654_010425 PF14071 Putative coat protein M654_010430 PF14003 YlbE-like protein M654_010435 PF06133 Control of competence regulator ComK, YlbF/YmcA M654_010440 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) M654_010450 PF01467 Cytidylyltransferase-like M654_010455 PF07670 Nucleoside recognition M654_010460 PF05362 Lon protease (S16) C-terminal proteolytic domain M654_010460 PF13180 PDZ domain M654_010465 PF05636 HIGH Nucleotidyl Transferase M654_010470 PF02620 Large ribosomal RNA subunit accumulation protein YceD M654_010475 PF01783 Ribosomal L32p protein family M654_010485 PF00583 Acetyltransferase (GNAT) family M654_010490 PF08546 Ketopantoate reductase PanE/ApbA C terminal M654_010490 PF02558 Ketopantoate reductase PanE/ApbA M654_010495 PF10079 Bacillithiol biosynthesis BshC M654_010500 PF02381 MraZ protein, putative antitoxin-like M654_010505 PF01795 MraW methylase family M654_010520 PF03793 PASTA domain M654_010520 PF03717 Penicillin-binding Protein dimerisation domain M654_010520 PF00905 Penicillin binding protein transpeptidase domain M654_010525 PF01225 Mur ligase family, catalytic domain M654_010525 PF08245 Mur ligase middle domain M654_010525 PF02875 Mur ligase family, glutamate ligase domain M654_010530 PF00953 Glycosyl transferase family 4 M654_010530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M654_010535 PF08245 Mur ligase middle domain M654_010535 PF02875 Mur ligase family, glutamate ligase domain M654_010540 PF01098 Cell cycle protein M654_010545 PF03033 Glycosyltransferase family 28 N-terminal domain M654_010545 PF04101 Glycosyltransferase family 28 C-terminal domain M654_010550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M654_010550 PF01565 FAD binding domain M654_010555 PF08478 POTRA domain, FtsQ-type M654_010560 PF05949 Bacterial protein of unknown function (DUF881) M654_010565 PF05949 Bacterial protein of unknown function (DUF881) M654_010570 PF06947 Protein of unknown function (DUF1290) M654_010575 PF02491 SHS2 domain inserted in FTSA M654_010580 PF00091 Tubulin/FtsZ family, GTPase domain M654_010580 PF12327 FtsZ family, C-terminal domain M654_010585 PF05922 Peptidase inhibitor I9 M654_010585 PF00082 Subtilase family M654_010590 PF05922 Peptidase inhibitor I9 M654_010590 PF00082 Subtilase family M654_010595 PF03419 Sporulation factor SpoIIGA M654_010600 PF04542 Sigma-70 region 2 M654_010600 PF04545 Sigma-70, region 4 M654_010605 PF04542 Sigma-70 region 2 M654_010605 PF04539 Sigma-70 region 3 M654_010605 PF04545 Sigma-70, region 4 M654_010610 PF00005 ABC transporter M654_010615 PF08241 Methyltransferase domain M654_010620 PF05239 PRC-barrel domain M654_010630 PF01168 Alanine racemase, N-terminal domain M654_010635 PF04472 Cell division protein SepF M654_010640 PF02325 YGGT family M654_010645 PF01479 S4 domain M654_010645 PF17774 Putative RNA-binding domain in YlmH M654_010650 PF05103 DivIVA protein M654_010655 PF08264 Anticodon-binding domain of tRNA M654_010655 PF00133 tRNA synthetases class I (I, L, M and V) M654_010655 PF06827 Zinc finger found in FPG and IleRS M654_010660 PF01258 Prokaryotic dksA/traR C4-type zinc finger M654_010665 PF01252 Signal peptidase (SPase) II M654_010670 PF01479 S4 domain M654_010670 PF00849 RNA pseudouridylate synthase M654_010675 PF00156 Phosphoribosyl transferase domain M654_010680 PF00860 Permease family M654_010685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M654_010685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M654_010690 PF01979 Amidohydrolase family M654_010695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M654_010695 PF00117 Glutamine amidotransferase class-I M654_010700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M654_010700 PF02142 MGS-like domain M654_010700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M654_010705 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B M654_010705 PF00175 Oxidoreductase NAD-binding domain M654_010710 PF01180 Dihydroorotate dehydrogenase M654_010715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M654_010720 PF00156 Phosphoribosyl transferase domain M654_010730 PF01507 Phosphoadenosine phosphosulfate reductase family M654_010735 PF01384 Phosphate transporter family M654_010740 PF01747 ATP-sulfurylase M654_010740 PF14306 PUA-like domain M654_010750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M654_010755 PF01903 CbiX M654_010765 PF05670 NFACT protein RNA binding domain M654_010770 PF00690 Cation transporter/ATPase, N-terminus M654_010770 PF00689 Cation transporting ATPase, C-terminus M654_010775 PF03755 YicC-like family, N-terminal region M654_010775 PF08340 Domain of unknown function (DUF1732) M654_010780 PF04025 Domain of unknown function (DUF370) M654_010785 PF00625 Guanylate kinase M654_010790 PF01192 RNA polymerase Rpb6 M654_010795 PF04127 DNA / pantothenate metabolism flavoprotein M654_010795 PF02441 Flavoprotein M654_010800 PF17764 3′ DNA-binding domain (3′BD) M654_010800 PF00271 Helicase conserved C-terminal domain M654_010800 PF04851 Type III restriction enzyme, res subunit M654_010800 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M654_010800 PF18074 Primosomal protein N C-terminal domain M654_010805 PF01327 Polypeptide deformylase M654_010810 PF02911 Formyl transferase, C-terminal domain M654_010810 PF00551 Formyl transferase M654_010815 PF01029 NusB family M654_010815 PF01189 16S rRNA methyltransferase RsmB/F M654_010820 PF04055 Radical SAM superfamily M654_010830 PF00069 Protein kinase domain M654_010830 PF03793 PASTA domain M654_010835 PF03193 RsgA GTPase M654_010835 PF16745 RsgA N-terminal domain M654_010840 PF00834 Ribulose-phosphate 3 epimerase family M654_010845 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain M654_010845 PF04263 Thiamin pyrophosphokinase, catalytic domain M654_010850 PF08183 Stage V sporulation protein family M654_010855 PF00830 Ribosomal L28 family M654_010860 PF03780 Asp23 family, cell envelope-related function M654_010865 PF13684 Dihydroxyacetone kinase family M654_010865 PF02734 DAK2 domain M654_010870 PF01842 ACT domain M654_010870 PF03315 Serine dehydratase beta chain M654_010875 PF03313 Serine dehydratase alpha chain M654_010880 PF17191 RecG wedge domain M654_010880 PF00271 Helicase conserved C-terminal domain M654_010880 PF00270 DEAD/DEAH box helicase M654_010885 PF03061 Thioesterase superfamily M654_010885 PF08279 HTH domain M654_010890 PF02504 Fatty acid synthesis protein M654_010895 PF00698 Acyl transferase domain M654_010905 PF00550 Phosphopantetheine attachment site M654_010910 PF00035 Double-stranded RNA binding motif M654_010910 PF14622 Ribonuclease-III-like M654_010915 PF02463 RecF/RecN/SMC N terminal domain M654_010915 PF06470 SMC proteins Flexible Hinge Domain M654_010920 PF00448 SRP54-type protein, GTPase domain M654_010920 PF02881 SRP54-type protein, helical bundle domain M654_010925 PF04297 Putative helix-turn-helix protein, YlxM / p13 like M654_010930 PF00448 SRP54-type protein, GTPase domain M654_010930 PF02881 SRP54-type protein, helical bundle domain M654_010930 PF02978 Signal peptide binding domain M654_010935 PF00886 Ribosomal protein S16 M654_010945 PF11068 YlqD protein M654_010950 PF05239 PRC-barrel domain M654_010950 PF01782 RimM N-terminal domain M654_010955 PF01746 tRNA (Guanine-1)-methyltransferase M654_010960 PF01245 Ribosomal protein L19 M654_010965 PF01926 50S ribosome-binding GTPase M654_010970 PF01351 Ribonuclease HII M654_010980 PF01312 FlhB HrpN YscU SpaS Family M654_010985 PF00549 CoA-ligase M654_010985 PF08442 ATP-grasp domain M654_010990 PF00549 CoA-ligase M654_010990 PF02629 CoA binding domain M654_010995 PF02481 DNA recombination-mediator protein A M654_011000 PF01131 DNA topoisomerase M654_011000 PF01396 Topoisomerase DNA binding C4 zinc finger M654_011000 PF01751 Toprim domain M654_011005 PF01134 Glucose inhibited division protein A M654_011010 PF00589 Phage integrase family M654_011010 PF02899 Phage integrase, N-terminal SAM-like domain M654_011015 PF00227 Proteasome subunit M654_011020 PF00004 ATPase family associated with various cellular activities (AAA) M654_011020 PF07724 AAA domain (Cdc48 subfamily) M654_011020 PF10431 C-terminal, D2-small domain, of ClpB protein M654_011025 PF06018 CodY GAF-like domain M654_011025 PF08222 CodY helix-turn-helix domain M654_011030 PF00460 Flagella basal body rod protein M654_011035 PF00460 Flagella basal body rod protein M654_011035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M654_011040 PF02049 Flagellar hook-basal body complex protein FliE M654_011045 PF08345 Flagellar M-ring protein C-terminal M654_011045 PF01514 Secretory protein of YscJ/FliF family M654_011050 PF14842 FliG N-terminal domain M654_011050 PF14841 FliG middle domain M654_011050 PF01706 FliG C-terminal domain M654_011055 PF02108 Flagellar assembly protein FliH M654_011060 PF02874 ATP synthase alpha/beta family, beta-barrel domain M654_011060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M654_011060 PF18269 T3SS EscN ATPase C-terminal domain M654_011065 PF02050 Flagellar FliJ protein M654_011075 PF02120 Flagellar hook-length control protein FliK M654_011080 PF03963 Flagellar hook capping protein - N-terminal region M654_011085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M654_011085 PF00460 Flagella basal body rod protein M654_011090 PF06289 Flagellar and Swarming motility proteins M654_011095 PF03748 Flagellar basal body-associated protein FliL M654_011100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M654_011100 PF02154 Flagellar motor switch protein FliM M654_011105 PF04509 CheC-like family M654_011105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M654_011110 PF00072 Response regulator receiver domain M654_011115 PF04347 Flagellar biosynthesis protein, FliO M654_011120 PF00813 FliP family M654_011125 PF01313 Bacterial export proteins, family 3 M654_011130 PF01311 Bacterial export proteins, family 1 M654_011135 PF01312 FlhB HrpN YscU SpaS Family M654_011140 PF00771 FHIPEP family M654_011145 PF00448 SRP54-type protein, GTPase domain M654_011150 PF10609 NUBPL iron-transfer P-loop NTPase M654_011155 PF00072 Response regulator receiver domain M654_011155 PF01339 CheB methylesterase M654_011160 PF01627 Hpt domain M654_011160 PF07194 P2 response regulator binding domain M654_011160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_011160 PF02895 Signal transducing histidine kinase, homodimeric domain M654_011160 PF01584 CheW-like domain M654_011165 PF01584 CheW-like domain M654_011170 PF04509 CheC-like family M654_011175 PF03975 CheD chemotactic sensory transduction M654_011180 PF04539 Sigma-70 region 3 M654_011180 PF04545 Sigma-70, region 4 M654_011180 PF04542 Sigma-70 region 2 M654_011190 PF00318 Ribosomal protein S2 M654_011195 PF00889 Elongation factor TS M654_011200 PF00696 Amino acid kinase family M654_011205 PF01765 Ribosome recycling factor M654_011210 PF01255 Putative undecaprenyl diphosphate synthase M654_011220 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M654_011220 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M654_011220 PF13288 DXP reductoisomerase C-terminal domain M654_011225 PF17820 PDZ domain M654_011225 PF02163 Peptidase family M50 M654_011230 PF03129 Anticodon binding domain M654_011230 PF04073 Aminoacyl-tRNA editing domain M654_011230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M654_011235 PF11490 DNA polymerase III polC-type N-terminus II M654_011235 PF02811 PHP domain M654_011235 PF00929 Exonuclease M654_011235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M654_011235 PF14480 DNA polymerase III polC-type N-terminus I M654_011235 PF14579 Helix-hairpin-helix motif M654_011235 PF07733 Bacterial DNA polymerase III alpha NTPase domain M654_011240 PF00942 Cellulose binding domain M654_011240 PF00759 Glycosyl hydrolase family 9 M654_011245 PF00942 Cellulose binding domain M654_011245 PF02011 Glycosyl hydrolase family 48 M654_011245 PF00759 Glycosyl hydrolase family 9 M654_011250 PF18448 Carbohydrate binding domain M654_011250 PF03442 Carbohydrate binding domain X2 M654_011250 PF00150 Cellulase (glycosyl hydrolase family 5) M654_011255 PF02576 RimP N-terminal domain M654_011255 PF17384 RimP C-terminal SH3 domain M654_011260 PF13184 NusA-like KH domain M654_011260 PF00575 S1 RNA binding domain M654_011260 PF08529 NusA N-terminal domain M654_011265 PF04296 Protein of unknown function (DUF448) M654_011270 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M654_011275 PF11987 Translation-initiation factor 2 M654_011275 PF00009 Elongation factor Tu GTP binding domain M654_011275 PF04760 Translation initiation factor IF-2, N-terminal region M654_011280 PF04456 Protein of unknown function (DUF503) M654_011285 PF02033 Ribosome-binding factor A M654_011290 PF16198 tRNA pseudouridylate synthase B C-terminal domain M654_011290 PF01509 TruB family pseudouridylate synthase (N terminal domain) M654_011295 PF06574 FAD synthetase M654_011295 PF01687 Riboflavin kinase M654_011300 PF00312 Ribosomal protein S15 M654_011305 PF00013 KH domain M654_011305 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M654_011305 PF01138 3' exoribonuclease family, domain 1 M654_011305 PF00575 S1 RNA binding domain M654_011305 PF03725 3' exoribonuclease family, domain 2 M654_011310 PF01522 Polysaccharide deacetylase M654_011315 PF00675 Insulinase (Peptidase family M16) M654_011315 PF05193 Peptidase M16 inactive domain M654_011320 PF05239 PRC-barrel domain M654_011325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M654_011325 PF16924 Dipicolinate synthase subunit A N-terminal domain M654_011330 PF02441 Flavoprotein M654_011335 PF02774 Semialdehyde dehydrogenase, dimerisation domain M654_011335 PF01118 Semialdehyde dehydrogenase, NAD binding domain M654_011340 PF00696 Amino acid kinase family M654_011340 PF13840 ACT domain M654_011345 PF00701 Dihydrodipicolinate synthetase family M654_011350 PF00753 Metallo-beta-lactamase superfamily M654_011350 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M654_011350 PF17770 Ribonuclease J C-terminal domain M654_011355 PF00574 Clp protease M654_011360 PF14035 YlzJ-like protein M654_011365 PF17854 FtsK alpha domain M654_011365 PF01580 FtsK/SpoIIIE family M654_011365 PF09397 Ftsk gamma domain M654_011370 PF00392 Bacterial regulatory proteins, gntR family M654_011370 PF07702 UTRA domain M654_011375 PF07690 Major Facilitator Superfamily M654_011380 PF05193 Peptidase M16 inactive domain M654_011385 PF05193 Peptidase M16 inactive domain M654_011385 PF00675 Insulinase (Peptidase family M16) M654_011395 PF11588 Protein of unknown function (DUF3243) M654_011400 PF11868 Protein of unknown function (DUF3388) M654_011405 PF13464 Domain of unknown function (DUF4115) M654_011410 PF01066 CDP-alcohol phosphatidyltransferase M654_011415 PF02464 Competence-damaged protein M654_011415 PF00994 Probable molybdopterin binding domain M654_011415 PF18146 Damage-inducible protein CinA KH domain M654_011420 PF00154 recA bacterial DNA recombination protein M654_011425 PF01966 HD domain M654_011425 PF00013 KH domain M654_011425 PF12072 Domain of unknown function (DUF3552) M654_011430 PF13277 YmdB-like protein M654_011435 PF04232 Stage V sporulation protein S (SpoVS) M654_011440 PF01244 Membrane dipeptidase (Peptidase family M19) M654_011445 PF00107 Zinc-binding dehydrogenase M654_011445 PF08240 Alcohol dehydrogenase GroES-like domain M654_011450 PF00155 Aminotransferase class I and II M654_011455 PF00919 Uncharacterized protein family UPF0004 M654_011455 PF04055 Radical SAM superfamily M654_011455 PF01938 TRAM domain M654_011460 PF06133 Control of competence regulator ComK, YlbF/YmcA M654_011465 PF10628 Outer spore coat protein E (CotE) M654_011470 PF00488 MutS domain V M654_011470 PF05190 MutS family domain IV M654_011470 PF05192 MutS domain III M654_011470 PF05188 MutS domain II M654_011470 PF01624 MutS domain I M654_011475 PF01119 DNA mismatch repair protein, C-terminal domain M654_011475 PF08676 MutL C terminal dimerisation domain M654_011480 PF02368 Bacterial Ig-like domain (group 2) M654_011485 PF02368 Bacterial Ig-like domain (group 2) M654_011490 PF05504 Spore germination B3/ GerAC like, C-terminal M654_011505 PF13732 Domain of unknown function (DUF4162) M654_011505 PF00005 ABC transporter M654_011510 PF01061 ABC-2 type transporter M654_011515 PF12945 Flagellar protein YcgR M654_011515 PF07238 PilZ domain M654_011520 PF13217 Protein of unknown function (DUF4025) M654_011550 PF01381 Helix-turn-helix M654_011570 PF03551 Transcriptional regulator PadR-like family M654_011590 PF10100 Staphylopine dehydrogenase M654_011595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M654_011600 PF00528 Binding-protein-dependent transport system inner membrane component M654_011605 PF00528 Binding-protein-dependent transport system inner membrane component M654_011605 PF12911 N-terminal TM domain of oligopeptide transport permease C M654_011610 PF00005 ABC transporter M654_011615 PF00005 ABC transporter M654_011620 PF07690 Major Facilitator Superfamily M654_011635 PF01037 Lrp/AsnC ligand binding domain M654_011640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M654_011665 PF04740 LXG domain of WXG superfamily M654_011665 PF14436 Bacterial EndoU nuclease M654_011670 PF00348 Polyprenyl synthetase M654_011680 PF13176 Tetratricopeptide repeat M654_011680 PF18801 response regulator aspartate phosphatase H, N terminal M654_011685 PF01979 Amidohydrolase family M654_011690 PF11122 Inner spore coat protein D M654_011695 PF06912 Protein of unknown function (DUF1275) M654_011700 PF02080 TrkA-C domain M654_011700 PF03471 Transporter associated domain M654_011700 PF00999 Sodium/hydrogen exchanger family M654_011705 PF00561 alpha/beta hydrolase fold M654_011715 PF01906 Putative heavy-metal-binding M654_011720 PF09335 SNARE associated Golgi protein M654_011725 PF00144 Beta-lactamase M654_011725 PF11954 Domain of unknown function (DUF3471) M654_011730 PF04101 Glycosyltransferase family 28 C-terminal domain M654_011735 PF13520 Amino acid permease M654_011740 PF07875 Coat F domain M654_011750 PF01476 LysM domain M654_011750 PF00704 Glycosyl hydrolases family 18 M654_011765 PF02566 OsmC-like protein M654_011770 PF00893 Small Multidrug Resistance protein M654_011775 PF00893 Small Multidrug Resistance protein M654_011790 PF12788 YmaF family M654_011800 PF17209 Hfq protein M654_011810 PF07972 NrdI Flavodoxin like M654_011815 PF08343 Ribonucleotide reductase N-terminal M654_011815 PF00317 Ribonucleotide reductase, all-alpha domain M654_011815 PF02867 Ribonucleotide reductase, barrel domain M654_011820 PF00268 Ribonucleotide reductase, small chain M654_011830 PF00392 Bacterial regulatory proteins, gntR family M654_011830 PF07729 FCD domain M654_011835 PF13536 Putative multidrug resistance efflux transporter M654_011840 PF01520 N-acetylmuramoyl-L-alanine amidase M654_011840 PF05036 Sporulation related domain M654_011850 PF01230 HIT domain M654_011860 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH M654_011860 PF04740 LXG domain of WXG superfamily M654_011870 PF07690 Major Facilitator Superfamily M654_011875 PF18801 response regulator aspartate phosphatase H, N terminal M654_011885 PF04740 LXG domain of WXG superfamily M654_011885 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH M654_011905 PF18801 response regulator aspartate phosphatase H, N terminal M654_011920 PF03253 Urea transporter M654_011925 PF00547 Urease, gamma subunit M654_011930 PF00699 Urease beta subunit M654_011935 PF01979 Amidohydrolase family M654_011935 PF00449 Urease alpha-subunit, N-terminal domain M654_011940 PF05194 UreE urease accessory protein, C-terminal domain M654_011940 PF02814 UreE urease accessory protein, N-terminal domain M654_011945 PF01730 UreF M654_011950 PF02492 CobW/HypB/UreG, nucleotide-binding domain M654_011955 PF01774 UreD urease accessory protein M654_011960 PF13386 Cytochrome C biogenesis protein transmembrane region M654_011965 PF03551 Transcriptional regulator PadR-like family M654_011965 PF10400 Virulence activator alpha C-term M654_011975 PF00004 ATPase family associated with various cellular activities (AAA) M654_011975 PF17866 AAA lid domain M654_011980 PF01926 50S ribosome-binding GTPase M654_011980 PF16360 GTP-binding GTPase Middle Region M654_011980 PF13167 GTP-binding GTPase N-terminal M654_011985 PF06838 Methionine gamma-lyase M654_011990 PF13411 MerR HTH family regulatory protein M654_011995 PF03951 Glutamine synthetase, beta-Grasp domain M654_011995 PF00120 Glutamine synthetase, catalytic domain M654_012000 PF02899 Phage integrase, N-terminal SAM-like domain M654_012000 PF00589 Phage integrase family M654_012055 PF17356 Phage-like element PBSX protein XtrA M654_012075 PF00589 Phage integrase family M654_012130 PF03354 Phage Terminase M654_012200 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M654_012200 PF05257 CHAP domain M654_012205 PF12708 Pectate lyase superfamily protein M654_012205 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain M654_012220 PF10779 Haemolysin XhlA M654_012225 PF04688 SPP1 phage holin M654_012230 PF01183 Glycosyl hydrolases family 25 M654_012230 PF08239 Bacterial SH3 domain M654_012240 PF04740 LXG domain of WXG superfamily M654_012240 PF14449 Pre-toxin TG M654_012250 PF08863 YolD-like protein M654_012290 PF03830 PTS system sorbose subfamily IIB component M654_012290 PF03610 PTS system fructose IIA component M654_012295 PF03609 PTS system sorbose-specific iic component M654_012300 PF03613 PTS system mannose/fructose/sorbose family IID component M654_012310 PF01925 Sulfite exporter TauE/SafE M654_012320 PF07690 Major Facilitator Superfamily M654_012325 PF18801 response regulator aspartate phosphatase H, N terminal M654_012340 PF02224 Cytidylate kinase M654_012345 PF11518 Protein of unknown function (DUF3221) M654_012380 PF00692 dUTPase M654_012390 PF01593 Flavin containing amine oxidoreductase M654_012395 PF18801 response regulator aspartate phosphatase H, N terminal M654_012400 PF14184 Regulatory protein YrvL M654_012405 PF00440 Bacterial regulatory proteins, tetR family M654_012405 PF17934 Tetracyclin repressor-like, C-terminal domain M654_012410 PF00893 Small Multidrug Resistance protein M654_012415 PF00893 Small Multidrug Resistance protein M654_012420 PF13302 Acetyltransferase (GNAT) domain M654_012430 PF13783 Domain of unknown function (DUF4177) M654_012445 PF00583 Acetyltransferase (GNAT) family M654_012455 PF08360 QacR-like protein, C-terminal region M654_012455 PF00440 Bacterial regulatory proteins, tetR family M654_012475 PF00303 Thymidylate synthase M654_012485 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain M654_012485 PF12708 Pectate lyase superfamily protein M654_012490 PF00717 Peptidase S24-like M654_012490 PF01726 LexA DNA binding domain M654_012495 PF01476 LysM domain M654_012500 PF00239 Resolvase, N terminal domain M654_012505 PF05979 Bacterial protein of unknown function (DUF896) M654_012510 PF02780 Transketolase, C-terminal domain M654_012510 PF00456 Transketolase, thiamine diphosphate binding domain M654_012510 PF02779 Transketolase, pyrimidine binding domain M654_012515 PF10747 Sporulation inhibitor of replication protein SirA M654_012520 PF03672 Uncharacterised protein family (UPF0154) M654_012525 PF09388 Spo0E like sporulation regulatory protein M654_012530 PF02683 Cytochrome C biogenesis protein transmembrane region M654_012535 PF00072 Response regulator receiver domain M654_012540 PF07301 Protein of unknown function (DUF1453) M654_012545 PF11084 Protein of unknown function (DUF2621) M654_012555 PF08179 Small acid-soluble spore protein P family M654_012565 PF00694 Aconitase C-terminal domain M654_012565 PF00330 Aconitase family (aconitate hydratase) M654_012575 PF13040 Fur-regulated basic protein B M654_012580 PF08177 Small acid-soluble spore protein N family M654_012590 PF03061 Thioesterase superfamily M654_012600 PF01521 Iron-sulphur cluster biosynthesis M654_012605 PF02660 Glycerol-3-phosphate acyltransferase M654_012610 PF13380 CoA binding domain M654_012615 PF00986 DNA gyrase B subunit, carboxyl terminus M654_012615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_012615 PF01751 Toprim domain M654_012615 PF00204 DNA gyrase B M654_012620 PF03989 DNA gyrase C-terminal domain, beta-propeller M654_012620 PF00521 DNA gyrase/topoisomerase IV, subunit A M654_012625 PF00106 short chain dehydrogenase M654_012635 PF01235 Sodium:alanine symporter family M654_012645 PF02665 Nitrate reductase gamma subunit M654_012650 PF02613 Nitrate reductase delta subunit M654_012655 PF13247 4Fe-4S dicluster domain M654_012655 PF14711 Respiratory nitrate reductase beta C-terminal M654_012660 PF01568 Molydopterin dinucleotide binding domain M654_012660 PF00384 Molybdopterin oxidoreductase M654_012660 PF14710 Respiratory nitrate reductase alpha N-terminal M654_012675 PF04055 Radical SAM superfamily M654_012675 PF13186 Iron-sulfur cluster-binding domain M654_012685 PF14256 YwiC-like protein M654_012690 PF00027 Cyclic nucleotide-binding domain M654_012690 PF00325 Bacterial regulatory proteins, crp family M654_012695 PF07690 Major Facilitator Superfamily M654_012705 PF00027 Cyclic nucleotide-binding domain M654_012705 PF13545 Crp-like helix-turn-helix domain M654_012710 PF00115 Cytochrome C and Quinol oxidase polypeptide I M654_012715 PF01814 Hemerythrin HHE cation binding domain M654_012715 PF04405 Domain of Unknown function (DUF542) M654_012720 PF07098 Protein of unknown function (DUF1360) M654_012725 PF00942 Cellulose binding domain M654_012725 PF00150 Cellulase (glycosyl hydrolase family 5) M654_012730 PF17452 Uncharacterized YnfE-like M654_012735 PF13302 Acetyltransferase (GNAT) domain M654_012745 PF07690 Major Facilitator Superfamily M654_012755 PF00391 PEP-utilising enzyme, mobile domain M654_012755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M654_012770 PF13229 Right handed beta helix region M654_012775 PF05525 Branched-chain amino acid transport protein M654_012800 PF00378 Enoyl-CoA hydratase/isomerase M654_012805 PF00171 Aldehyde dehydrogenase family M654_012810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M654_012810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M654_012815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M654_012815 PF02770 Acyl-CoA dehydrogenase, middle domain M654_012815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M654_012820 PF01238 Phosphomannose isomerase type I M654_012825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_012825 PF02378 Phosphotransferase system, EIIC M654_012825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_012830 PF00874 PRD domain M654_012830 PF08279 HTH domain M654_012830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_012830 PF05043 Mga helix-turn-helix domain M654_012840 PF00005 ABC transporter M654_012845 PF00392 Bacterial regulatory proteins, gntR family M654_012855 PF00440 Bacterial regulatory proteins, tetR family M654_012855 PF16859 Tetracyclin repressor-like, C-terminal domain M654_012880 PF04616 Glycosyl hydrolases family 43 M654_012880 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M654_012885 PF00675 Insulinase (Peptidase family M16) M654_012885 PF05193 Peptidase M16 inactive domain M654_012885 PF08367 Peptidase M16C associated M654_012890 PF00085 Thioredoxin M654_012900 PF00664 ABC transporter transmembrane region M654_012900 PF00005 ABC transporter M654_012905 PF00664 ABC transporter transmembrane region M654_012905 PF00005 ABC transporter M654_012910 PF00158 Sigma-54 interaction domain M654_012910 PF02954 Bacterial regulatory protein, Fis family M654_012910 PF13426 PAS domain M654_012915 PF01053 Cys/Met metabolism PLP-dependent enzyme M654_012930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M654_012930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M654_012940 PF01451 Low molecular weight phosphotyrosine protein phosphatase M654_012945 PF02040 Arsenical pump membrane protein M654_012950 PF01022 Bacterial regulatory protein, arsR family M654_012955 PF00842 Alanine racemase, C-terminal domain M654_012955 PF01168 Alanine racemase, N-terminal domain M654_012965 PF06800 Sugar transport protein M654_012970 PF02638 Glycosyl hydrolase-like 10 M654_012980 PF04055 Radical SAM superfamily M654_012985 PF01228 Glycine radical M654_012985 PF02901 Pyruvate formate lyase-like M654_012990 PF00534 Glycosyl transferases group 1 M654_012990 PF13439 Glycosyltransferase Family 4 M654_012995 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M654_013000 PF02156 Glycosyl hydrolase family 26 M654_013000 PF03425 Carbohydrate binding domain (family 11) M654_013010 PF00356 Bacterial regulatory proteins, lacI family M654_013015 PF00232 Glycosyl hydrolase family 1 M654_013025 PF13416 Bacterial extracellular solute-binding protein M654_013030 PF00528 Binding-protein-dependent transport system inner membrane component M654_013035 PF00528 Binding-protein-dependent transport system inner membrane component M654_013040 PF16875 Glycosyl hydrolase family 36 N-terminal domain M654_013040 PF16874 Glycosyl hydrolase family 36 C-terminal domain M654_013045 PF00480 ROK family M654_013060 PF00005 ABC transporter M654_013065 PF00440 Bacterial regulatory proteins, tetR family M654_013065 PF17934 Tetracyclin repressor-like, C-terminal domain M654_013075 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_013080 PF07849 Protein of unknown function (DUF1641) M654_013085 PF12728 Helix-turn-helix domain M654_013095 PF13193 AMP-binding enzyme C-terminal domain M654_013095 PF00501 AMP-binding enzyme M654_013095 PF16177 Acetyl-coenzyme A synthetase N-terminus M654_013100 PF01039 Carboxyl transferase domain M654_013105 PF00378 Enoyl-CoA hydratase/isomerase M654_013110 PF00682 HMGL-like M654_013115 PF00364 Biotin-requiring enzyme M654_013120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M654_013120 PF02785 Biotin carboxylase C-terminal domain M654_013120 PF00289 Biotin carboxylase, N-terminal domain M654_013125 PF00501 AMP-binding enzyme M654_013125 PF13193 AMP-binding enzyme C-terminal domain M654_013130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M654_013130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M654_013130 PF02770 Acyl-CoA dehydrogenase, middle domain M654_013135 PF00171 Aldehyde dehydrogenase family M654_013140 PF01472 PUA domain M654_013140 PF00696 Amino acid kinase family M654_013145 PF14748 Pyrroline-5-carboxylate reductase dimerisation M654_013145 PF03807 NADP oxidoreductase coenzyme F420-dependent M654_013150 PF04239 Protein of unknown function (DUF421) M654_013160 PF01747 ATP-sulfurylase M654_013160 PF14306 PUA-like domain M654_013165 PF01384 Phosphate transporter family M654_013170 PF01507 Phosphoadenosine phosphosulfate reductase family M654_013175 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) M654_013180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M654_013185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M654_013185 PF13378 Enolase C-terminal domain-like M654_013190 PF07690 Major Facilitator Superfamily M654_013195 PF00535 Glycosyl transferase family 2 M654_013210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M654_013210 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_013215 PF00310 Glutamine amidotransferases class-II M654_013215 PF01493 GXGXG motif M654_013215 PF01645 Conserved region in glutamate synthase M654_013215 PF04898 Glutamate synthase central domain M654_013220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_013220 PF03466 LysR substrate binding domain M654_013245 PF00005 ABC transporter M654_013245 PF00664 ABC transporter transmembrane region M654_013250 PF00005 ABC transporter M654_013250 PF00664 ABC transporter transmembrane region M654_013255 PF16655 PhoD-like phosphatase, N-terminal domain M654_013255 PF09423 PhoD-like phosphatase M654_013260 PF00067 Cytochrome P450 M654_013265 PF00106 short chain dehydrogenase M654_013270 PF07690 Major Facilitator Superfamily M654_013275 PF00384 Molybdopterin oxidoreductase M654_013275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M654_013275 PF01568 Molydopterin dinucleotide binding domain M654_013285 PF07690 Major Facilitator Superfamily M654_013290 PF03845 Spore germination protein M654_013295 PF05504 Spore germination B3/ GerAC like, C-terminal M654_013300 PF03845 Spore germination protein M654_013305 PF03845 Spore germination protein M654_013310 PF03323 Bacillus/Clostridium GerA spore germination protein M654_013320 PF05504 Spore germination B3/ GerAC like, C-terminal M654_013330 PF03323 Bacillus/Clostridium GerA spore germination protein M654_013345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_013345 PF02743 Cache domain M654_013345 PF00672 HAMP domain M654_013350 PF01588 Putative tRNA binding domain M654_013355 PF13302 Acetyltransferase (GNAT) domain M654_013360 PF00082 Subtilase family M654_013365 PF17329 Family of unknown function (DUF5367) M654_013370 PF17932 Tetracyclin repressor-like, C-terminal domain M654_013370 PF00440 Bacterial regulatory proteins, tetR family M654_013375 PF01047 MarR family M654_013380 PF01966 HD domain M654_013390 PF14158 YndJ-like protein M654_013395 PF13761 Domain of unknown function (DUF4166) M654_013405 PF13305 Tetracyclin repressor-like, C-terminal domain M654_013405 PF00440 Bacterial regulatory proteins, tetR family M654_013410 PF00753 Metallo-beta-lactamase superfamily M654_013415 PF06445 GyrI-like small molecule binding domain M654_013420 PF13280 WYL domain M654_013420 PF08279 HTH domain M654_013430 PF01022 Bacterial regulatory protein, arsR family M654_013445 PF00324 Amino acid permease M654_013455 PF02719 Polysaccharide biosynthesis protein M654_013470 PF00534 Glycosyl transferases group 1 M654_013475 PF04238 Protein of unknown function (DUF420) M654_013490 PF02016 LD-carboxypeptidase N-terminal domain M654_013490 PF17676 LD-carboxypeptidase C-terminal domain M654_013495 PF00474 Sodium:solute symporter family M654_013500 PF01476 LysM domain M654_013500 PF06725 3D domain M654_013505 PF16124 RecQ zinc-binding M654_013505 PF00270 DEAD/DEAH box helicase M654_013505 PF00271 Helicase conserved C-terminal domain M654_013505 PF09382 RQC domain M654_013505 PF00570 HRDC domain M654_013515 PF14070 Putative motility protein M654_013565 PF18801 response regulator aspartate phosphatase H, N terminal M654_013580 PF08818 Domain of unknown function (DU1801) M654_013585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_013595 PF04892 VanZ like family M654_013600 PF02557 D-alanyl-D-alanine carboxypeptidase M654_013605 PF00512 His Kinase A (phospho-acceptor) domain M654_013605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_013610 PF00486 Transcriptional regulatory protein, C terminal M654_013610 PF00072 Response regulator receiver domain M654_013630 PF05504 Spore germination B3/ GerAC like, C-terminal M654_013655 PF07690 Major Facilitator Superfamily M654_013660 PF08386 TAP-like protein M654_013660 PF00561 alpha/beta hydrolase fold M654_013670 PF11122 Inner spore coat protein D M654_013675 PF01810 LysE type translocator M654_013680 PF00253 Ribosomal protein S14p/S29e M654_013685 PF00391 PEP-utilising enzyme, mobile domain M654_013685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M654_013695 PF00440 Bacterial regulatory proteins, tetR family M654_013705 PF10710 Protein of unknown function (DUF2512) M654_013730 PF05163 DinB family M654_013735 PF02525 Flavodoxin-like fold M654_013740 PF01258 Prokaryotic dksA/traR C4-type zinc finger M654_013745 PF08000 Bacterial PH domain M654_013755 PF00171 Aldehyde dehydrogenase family M654_013765 PF13460 NAD(P)H-binding M654_013765 PF11066 Protein of unknown function (DUF2867) M654_013770 PF07690 Major Facilitator Superfamily M654_013775 PF01636 Phosphotransferase enzyme family M654_013785 PF00248 Aldo/keto reductase family M654_013790 PF13243 Squalene-hopene cyclase C-terminal domain M654_013790 PF13249 Squalene-hopene cyclase N-terminal domain M654_013795 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M654_013795 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M654_013810 PF00209 Sodium:neurotransmitter symporter family M654_013815 PF01758 Sodium Bile acid symporter family M654_013820 PF00364 Biotin-requiring enzyme M654_013820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M654_013820 PF02817 e3 binding domain M654_013825 PF02779 Transketolase, pyrimidine binding domain M654_013825 PF16870 2-oxoglutarate dehydrogenase C-terminal M654_013825 PF00676 Dehydrogenase E1 component M654_013830 PF00092 von Willebrand factor type A domain M654_013835 PF07728 AAA domain (dynein-related subfamily) M654_013840 PF00080 Copper/zinc superoxide dismutase (SODC) M654_013840 PF13627 Prokaryotic lipoprotein-attachment site M654_013845 PF01476 LysM domain M654_013845 PF00877 NlpC/P60 family M654_013850 PF01554 MatE M654_013855 PF02585 GlcNAc-PI de-N-acetylase M654_013860 PF08830 Protein of unknown function (DUF1806) M654_013870 PF00892 EamA-like transporter family M654_013880 PF03330 Lytic transglycolase M654_013895 PF01638 HxlR-like helix-turn-helix M654_013900 PF00881 Nitroreductase family M654_013905 PF01738 Dienelactone hydrolase family M654_013910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_013915 PF11755 Protein of unknown function (DUF3311) M654_013920 PF00474 Sodium:solute symporter family M654_013925 PF17820 PDZ domain M654_013925 PF03572 Peptidase family S41 M654_013925 PF01471 Putative peptidoglycan binding domain M654_013930 PF08241 Methyltransferase domain M654_013940 PF02557 D-alanyl-D-alanine carboxypeptidase M654_013945 PF01048 Phosphorylase superfamily M654_013950 PF03773 Predicted permease M654_013965 PF14191 YodL-like M654_013970 PF01569 PAP2 superfamily M654_013975 PF14162 YozD-like protein M654_013985 PF06855 YozE SAM-like fold M654_013990 PF14122 YokU-like protein, putative antitoxin M654_013995 PF12544 Lysine-2,3-aminomutase M654_014000 PF00583 Acetyltransferase (GNAT) family M654_014005 PF07687 Peptidase dimerisation domain M654_014005 PF01546 Peptidase family M20/M25/M40 M654_014010 PF01144 Coenzyme A transferase M654_014015 PF01144 Coenzyme A transferase M654_014020 PF00202 Aminotransferase class-III M654_014035 PF00583 Acetyltransferase (GNAT) family M654_014040 PF01641 SelR domain M654_014045 PF01625 Peptide methionine sulfoxide reductase M654_014050 PF01047 MarR family M654_014060 PF01554 MatE M654_014070 PF17431 Uncharacterized YmpT-like M654_014075 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) M654_014080 PF13472 GDSL-like Lipase/Acylhydrolase family M654_014085 PF02630 SCO1/SenC M654_014090 PF02645 Uncharacterised protein, DegV family COG1307 M654_014095 PF10751 Protein of unknown function (DUF2535) M654_014100 PF00291 Pyridoxal-phosphate dependent enzyme M654_014100 PF00585 C-terminal regulatory domain of Threonine dehydratase M654_014105 PF00158 Sigma-54 interaction domain M654_014105 PF08461 Ribonuclease R winged-helix domain M654_014110 PF03006 Haemolysin-III related M654_014120 PF00186 Dihydrofolate reductase M654_014125 PF04608 Phosphatidylglycerophosphatase A M654_014130 PF14005 YpjP-like protein M654_014135 PF08502 LeuA allosteric (dimerisation) domain M654_014135 PF00682 HMGL-like M654_014140 PF04445 Putative SAM-dependent methyltransferase M654_014145 PF06491 Disulphide isomerase M654_014150 PF00920 Dehydratase family M654_014155 PF13769 Virulence factor M654_014155 PF08712 Scaffold protein Nfu/NifU N terminal M654_014160 PF01966 HD domain M654_014165 PF00255 Glutathione peroxidase M654_014170 PF01268 Formate--tetrahydrofolate ligase M654_014175 PF04204 Homoserine O-succinyltransferase M654_014180 PF00534 Glycosyl transferases group 1 M654_014180 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase M654_014190 PF00313 'Cold-shock' DNA-binding domain M654_014200 PF10819 Protein of unknown function (DUF2564) M654_014205 PF10782 Zinc-finger M654_014210 PF13456 Reverse transcriptase-like M654_014215 PF02592 Putative vitamin uptake transporter M654_014220 PF13456 Reverse transcriptase-like M654_014230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M654_014230 PF01367 5'-3' exonuclease, C-terminal SAM fold M654_014235 PF10752 Protein of unknown function (DUF2533) M654_014240 PF00350 Dynamin family M654_014250 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M654_014255 PF02797 Chalcone and stilbene synthases, C-terminal domain M654_014255 PF00195 Chalcone and stilbene synthases, N-terminal domain M654_014260 PF13302 Acetyltransferase (GNAT) domain M654_014265 PF00860 Permease family M654_014270 PF00156 Phosphoribosyl transferase domain M654_014275 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M654_014280 PF13307 Helicase C-terminal domain M654_014290 PF01170 Putative RNA methylase family UPF0020 M654_014290 PF02926 THUMP domain M654_014300 PF05103 DivIVA protein M654_014305 PF06908 YspA SLOG family M654_014310 PF11122 Inner spore coat protein D M654_014315 PF13482 RNase_H superfamily M654_014320 PF00270 DEAD/DEAH box helicase M654_014320 PF09369 Domain of unknown function (DUF1998) M654_014320 PF00271 Helicase conserved C-terminal domain M654_014325 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M654_014340 PF14178 YppF-like protein M654_014345 PF08807 Bacterial domain of unknown function (DUF1798) M654_014360 PF10720 Protein of unknown function (DUF2515) M654_014365 PF03838 Recombination protein U M654_014370 PF00912 Transglycosylase M654_014370 PF00905 Penicillin binding protein transpeptidase domain M654_014380 PF00730 HhH-GPD superfamily base excision DNA repair protein M654_014380 PF10576 Iron-sulfur binding domain of endonuclease III M654_014380 PF00633 Helix-hairpin-helix motif M654_014385 PF07261 Replication initiation and membrane attachment M654_014390 PF00152 tRNA synthetases class II (D, K and N) M654_014390 PF01336 OB-fold nucleic acid binding domain M654_014395 PF00155 Aminotransferase class I and II M654_014400 PF03413 Peptidase propeptide and YPEB domain M654_014400 PF17881 Domain of unknown function (DUF5590) M654_014405 PF14084 Protein of unknown function (DUF4264) M654_014410 PF04851 Type III restriction enzyme, res subunit M654_014410 PF00929 Exonuclease M654_014410 PF13307 Helicase C-terminal domain M654_014415 PF02261 Aspartate decarboxylase M654_014420 PF02569 Pantoate-beta-alanine ligase M654_014425 PF02548 Ketopantoate hydroxymethyltransferase M654_014430 PF03099 Biotin/lipoate A/B protein ligase family M654_014430 PF02237 Biotin protein ligase C terminal domain M654_014430 PF08279 HTH domain M654_014435 PF12627 Probable RNA and SrmB- binding site of polymerase A M654_014435 PF13735 tRNA nucleotidyltransferase domain 2 putative M654_014435 PF01743 Poly A polymerase head domain M654_014440 PF00534 Glycosyl transferases group 1 M654_014440 PF13439 Glycosyltransferase Family 4 M654_014445 PF02585 GlcNAc-PI de-N-acetylase M654_014450 PF02142 MGS-like domain M654_014455 PF05173 Dihydrodipicolinate reductase, C-terminus M654_014455 PF01113 Dihydrodipicolinate reductase, N-terminus M654_014460 PF03819 MazG nucleotide pyrophosphohydrolase domain M654_014465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M654_014465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M654_014470 PF09577 Sporulation protein YpjB (SpoYpjB) M654_014475 PF07187 Protein of unknown function (DUF1405) M654_014480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M654_014480 PF00032 Cytochrome b(C-terminal)/b6/petD M654_014485 PF00033 Cytochrome b/b6/petB M654_014490 PF00355 Rieske [2Fe-2S] domain M654_014495 PF10673 Protein of unknown function (DUF2487) M654_014500 PF08858 IDEAL domain M654_014500 PF08864 UPF0302 domain M654_014510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M654_014515 PF02153 Prephenate dehydrogenase M654_014515 PF01842 ACT domain M654_014520 PF00155 Aminotransferase class I and II M654_014525 PF00290 Tryptophan synthase alpha chain M654_014530 PF00291 Pyridoxal-phosphate dependent enzyme M654_014535 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M654_014540 PF00218 Indole-3-glycerol phosphate synthase M654_014545 PF02885 Glycosyl transferase family, helical bundle domain M654_014545 PF00591 Glycosyl transferase family, a/b domain M654_014550 PF04715 Anthranilate synthase component I, N terminal region M654_014550 PF00425 chorismate binding enzyme M654_014555 PF07736 Chorismate mutase type I M654_014560 PF01761 3-dehydroquinate synthase M654_014565 PF01264 Chorismate synthase M654_014570 PF01739 CheR methyltransferase, SAM binding domain M654_014570 PF03705 CheR methyltransferase, all-alpha domain M654_014575 PF00334 Nucleoside diphosphate kinase M654_014580 PF00348 Polyprenyl synthetase M654_014585 PF01209 ubiE/COQ5 methyltransferase family M654_014590 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 M654_014595 PF02081 Tryptophan RNA-binding attenuator protein M654_014600 PF01227 GTP cyclohydrolase I M654_014605 PF00216 Bacterial DNA-binding protein M654_014610 PF09547 Stage IV sporulation protein A (spore_IV_A) M654_014620 PF10966 Protein of unknown function (DUF2768) M654_014625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M654_014625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M654_014630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M654_014630 PF01926 50S ribosome-binding GTPase M654_014640 PF14045 YIEGIA protein M654_014650 PF14140 YpzI-like protein M654_014655 PF01070 FMN-dependent dehydrogenase M654_014660 PF00575 S1 RNA binding domain M654_014665 PF02224 Cytidylate kinase M654_014670 PF17313 Family of unknown function (DUF5359) M654_014675 PF03413 Peptidase propeptide and YPEB domain M654_014675 PF14620 YpeB sporulation M654_014680 PF01471 Putative peptidoglycan binding domain M654_014680 PF07486 Cell Wall Hydrolase M654_014685 PF13367 PrsW family intramembrane metalloprotease M654_014690 PF00710 Asparaginase, N-terminal M654_014690 PF17763 Glutaminase/Asparaginase C-terminal domain M654_014700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M654_014700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M654_014705 PF05389 Negative regulator of genetic competence (MecA) M654_014710 PF00149 Calcineurin-like phosphoesterase M654_014715 PF10864 Protein of unknown function (DUF2663) M654_014720 PF01476 LysM domain M654_014725 PF02517 CPBP intramembrane metalloprotease M654_014730 PF00270 DEAD/DEAH box helicase M654_014730 PF00271 Helicase conserved C-terminal domain M654_014735 PF14493 Helix-turn-helix domain M654_014745 PF12822 ECF transporter, substrate-specific component M654_014750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M654_014750 PF01842 ACT domain M654_014750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M654_014755 PF04225 Opacity-associated protein A LysM-like domain M654_014755 PF01551 Peptidase family M23 M654_014765 PF08281 Sigma-70, region 4 M654_014765 PF04542 Sigma-70 region 2 M654_014770 PF03816 Cell envelope-related transcriptional attenuator domain M654_014775 PF01522 Polysaccharide deacetylase M654_014785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_014785 PF00512 His Kinase A (phospho-acceptor) domain M654_014790 PF00486 Transcriptional regulatory protein, C terminal M654_014790 PF00072 Response regulator receiver domain M654_014795 PF00672 HAMP domain M654_014795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_014795 PF18698 Histidine kinase sensor domain M654_014795 PF00512 His Kinase A (phospho-acceptor) domain M654_014795 PF00989 PAS fold M654_014800 PF00072 Response regulator receiver domain M654_014800 PF00486 Transcriptional regulatory protein, C terminal M654_014805 PF01578 Cytochrome C assembly protein M654_014810 PF05140 ResB-like family M654_014815 PF00578 AhpC/TSA family M654_014820 PF00849 RNA pseudouridylate synthase M654_014820 PF01479 S4 domain M654_014825 PF07670 Nucleoside recognition M654_014830 PF07670 Nucleoside recognition M654_014835 PF00768 D-alanyl-D-alanine carboxypeptidase M654_014835 PF07943 Penicillin-binding protein 5, C-terminal domain M654_014840 PF13047 Protein of unknown function (DUF3907) M654_014845 PF04079 Segregation and condensation complex subunit ScpB M654_014850 PF02616 Segregation and condensation protein ScpA M654_014860 PF03745 Domain of unknown function (DUF309) M654_014865 PF00583 Acetyltransferase (GNAT) family M654_014870 PF00885 6,7-dimethyl-8-ribityllumazine synthase M654_014875 PF00925 GTP cyclohydrolase II M654_014875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M654_014880 PF00677 Lumazine binding domain M654_014885 PF01872 RibD C-terminal domain M654_014885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M654_014900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M654_014910 PF06207 Protein of unknown function (DUF1002) M654_014915 PF05908 Poly-gamma-glutamate hydrolase M654_014920 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M654_014920 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M654_014930 PF03323 Bacillus/Clostridium GerA spore germination protein M654_014935 PF14097 Stage V sporulation protein AE1 M654_014940 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M654_014945 PF07451 Stage V sporulation protein AD (SpoVAD) M654_014950 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M654_014955 PF13782 Stage V sporulation protein AB M654_014960 PF12164 Stage V sporulation protein AA M654_014965 PF04542 Sigma-70 region 2 M654_014965 PF04539 Sigma-70 region 3 M654_014965 PF04545 Sigma-70, region 4 M654_014970 PF13581 Histidine kinase-like ATPase domain M654_014975 PF01740 STAS domain M654_014980 PF07943 Penicillin-binding protein 5, C-terminal domain M654_014980 PF00768 D-alanyl-D-alanine carboxypeptidase M654_014985 PF01048 Phosphorylase superfamily M654_014990 PF01676 Metalloenzyme superfamily M654_014995 PF02899 Phage integrase, N-terminal SAM-like domain M654_014995 PF00589 Phage integrase family M654_015000 PF14004 Protein of unknown function (DUF4227) M654_015005 PF01475 Ferric uptake regulator family M654_015010 PF01944 Stage II sporulation protein M M654_015015 PF02378 Phosphotransferase system, EIIC M654_015020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_015025 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M654_015045 PF05711 Macrocin-O-methyltransferase (TylF) M654_015050 PF13673 Acetyltransferase (GNAT) domain M654_015060 PF00293 NUDIX domain M654_015065 PF13072 Mother cell inhibitor of FtsZ M654_015070 PF00440 Bacterial regulatory proteins, tetR family M654_015075 PF13564 DoxX-like family M654_015080 PF00248 Aldo/keto reductase family M654_015090 PF12146 Serine aminopeptidase, S33 M654_015095 PF10827 Protein of unknown function (DUF2552) M654_015100 PF01521 Iron-sulphur cluster biosynthesis M654_015110 PF13673 Acetyltransferase (GNAT) domain M654_015110 PF04229 GrpB protein M654_015115 PF03992 Antibiotic biosynthesis monooxygenase M654_015120 PF00583 Acetyltransferase (GNAT) family M654_015125 PF01674 Lipase (class 2) M654_015135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M654_015140 PF00528 Binding-protein-dependent transport system inner membrane component M654_015145 PF00528 Binding-protein-dependent transport system inner membrane component M654_015150 PF00005 ABC transporter M654_015155 PF00005 ABC transporter M654_015155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_015160 PF01554 MatE M654_015170 PF08863 YolD-like protein M654_015175 PF11798 IMS family HHH motif M654_015175 PF11799 impB/mucB/samB family C-terminal domain M654_015175 PF00817 impB/mucB/samB family M654_015185 PF14164 YqzH-like protein M654_015190 PF07690 Major Facilitator Superfamily M654_015200 PF00485 Phosphoribulokinase / Uridine kinase family M654_015210 PF00005 ABC transporter M654_015220 PF01569 PAP2 superfamily M654_015230 PF00005 ABC transporter M654_015235 PF13426 PAS domain M654_015235 PF00512 His Kinase A (phospho-acceptor) domain M654_015235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_015235 PF00672 HAMP domain M654_015240 PF00486 Transcriptional regulatory protein, C terminal M654_015240 PF00072 Response regulator receiver domain M654_015250 PF05908 Poly-gamma-glutamate hydrolase M654_015255 PF00106 short chain dehydrogenase M654_015260 PF00753 Metallo-beta-lactamase superfamily M654_015265 PF14748 Pyrroline-5-carboxylate reductase dimerisation M654_015265 PF03807 NADP oxidoreductase coenzyme F420-dependent M654_015270 PF01546 Peptidase family M20/M25/M40 M654_015275 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M654_015280 PF12146 Serine aminopeptidase, S33 M654_015285 PF00471 Ribosomal protein L33 M654_015290 PF00753 Metallo-beta-lactamase superfamily M654_015290 PF12706 Beta-lactamase superfamily domain M654_015295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M654_015295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M654_015310 PF16868 NMT1-like family M654_015315 PF02423 Ornithine cyclodeaminase/mu-crystallin family M654_015320 PF01266 FAD dependent oxidoreductase M654_015325 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_015325 PF04324 BFD-like [2Fe-2S] binding domain M654_015330 PF17806 Sarcosine oxidase A3 domain M654_015330 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_015330 PF01571 Aminomethyltransferase folate-binding domain M654_015330 PF08669 Glycine cleavage T-protein C-terminal barrel domain M654_015340 PF05525 Branched-chain amino acid transport protein M654_015350 PF07702 UTRA domain M654_015350 PF00392 Bacterial regulatory proteins, gntR family M654_015355 PF00232 Glycosyl hydrolase family 1 M654_015360 PF02378 Phosphotransferase system, EIIC M654_015365 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M654_015370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_015375 PF00245 Alkaline phosphatase M654_015385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M654_015385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M654_015390 PF11799 impB/mucB/samB family C-terminal domain M654_015390 PF00817 impB/mucB/samB family M654_015390 PF11798 IMS family HHH motif M654_015400 PF02096 60Kd inner membrane protein M654_015405 PF07687 Peptidase dimerisation domain M654_015405 PF01546 Peptidase family M20/M25/M40 M654_015410 PF01039 Carboxyl transferase domain M654_015420 PF11728 Putative aromatic acid exporter C-terminal domain M654_015420 PF06081 Aromatic acid exporter family member 1 M654_015425 PF00005 ABC transporter M654_015430 PF00528 Binding-protein-dependent transport system inner membrane component M654_015435 PF00497 Bacterial extracellular solute-binding proteins, family 3 M654_015440 PF06491 Disulphide isomerase M654_015445 PF00781 Diacylglycerol kinase catalytic domain M654_015450 PF02817 e3 binding domain M654_015450 PF00364 Biotin-requiring enzyme M654_015450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M654_015455 PF02779 Transketolase, pyrimidine binding domain M654_015455 PF02780 Transketolase, C-terminal domain M654_015460 PF00676 Dehydrogenase E1 component M654_015465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M654_015465 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_015470 PF00871 Acetokinase family M654_015475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M654_015475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M654_015480 PF01515 Phosphate acetyl/butaryl transferase M654_015485 PF02954 Bacterial regulatory protein, Fis family M654_015485 PF00989 PAS fold M654_015485 PF00158 Sigma-54 interaction domain M654_015490 PF11118 Protein of unknown function (DUF2627) M654_015495 PF03009 Glycerophosphoryl diester phosphodiesterase family M654_015500 PF01520 N-acetylmuramoyl-L-alanine amidase M654_015515 PF08769 Sporulation initiation factor Spo0A C terminal M654_015515 PF00072 Response regulator receiver domain M654_015520 PF05580 SpoIVB peptidase S55 M654_015520 PF17820 PDZ domain M654_015525 PF13476 AAA domain M654_015530 PF02863 Arginine repressor, C-terminal domain M654_015530 PF01316 Arginine repressor, DNA binding domain M654_015535 PF01728 FtsJ-like methyltransferase M654_015535 PF01479 S4 domain M654_015540 PF02780 Transketolase, C-terminal domain M654_015540 PF02779 Transketolase, pyrimidine binding domain M654_015540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M654_015545 PF00348 Polyprenyl synthetase M654_015550 PF02609 Exonuclease VII small subunit M654_015555 PF02601 Exonuclease VII, large subunit M654_015555 PF13742 OB-fold nucleic acid binding domain M654_015560 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M654_015560 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M654_015565 PF01029 NusB family M654_015570 PF03780 Asp23 family, cell envelope-related function M654_015575 PF02785 Biotin carboxylase C-terminal domain M654_015575 PF00289 Biotin carboxylase, N-terminal domain M654_015575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M654_015580 PF00364 Biotin-requiring enzyme M654_015585 PF12685 SpoIIIAH-like protein M654_015595 PF09581 Stage III sporulation protein AF (Spore_III_AF) M654_015600 PF09546 Stage III sporulation protein AE (spore_III_AE) M654_015605 PF06686 Stage III sporulation protein AC/AD protein family M654_015610 PF06686 Stage III sporulation protein AC/AD protein family M654_015615 PF09548 Stage III sporulation protein AB (spore_III_AB) M654_015625 PF10942 Protein of unknown function (DUF2619) M654_015630 PF09285 Elongation factor P, C-terminal M654_015630 PF01132 Elongation factor P (EF-P) OB domain M654_015630 PF08207 Elongation factor P (EF-P) KOW-like domain M654_015635 PF00557 Metallopeptidase family M24 M654_015635 PF01321 Creatinase/Prolidase N-terminal domain M654_015640 PF01220 Dehydroquinase class II M654_015645 PF11085 Conserved membrane protein YqhR M654_015650 PF07136 Protein of unknown function (DUF1385) M654_015660 PF01734 Patatin-like phospholipase M654_015665 PF02742 Iron dependent repressor, metal binding and dimerisation domain M654_015665 PF01325 Iron dependent repressor, N-terminal DNA binding domain M654_015670 PF03099 Biotin/lipoate A/B protein ligase family M654_015675 PF00581 Rhodanese-like domain M654_015680 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M654_015685 PF00528 Binding-protein-dependent transport system inner membrane component M654_015690 PF00571 CBS domain M654_015690 PF00005 ABC transporter M654_015695 PF02347 Glycine cleavage system P-protein M654_015700 PF02347 Glycine cleavage system P-protein M654_015705 PF08669 Glycine cleavage T-protein C-terminal barrel domain M654_015705 PF01571 Aminomethyltransferase folate-binding domain M654_015710 PF00176 SNF2 family N-terminal domain M654_015710 PF00271 Helicase conserved C-terminal domain M654_015715 PF11079 Bacterial protein YqhG of unknown function M654_015720 PF08671 Anti-repressor SinI M654_015725 PF08671 Anti-repressor SinI M654_015725 PF01381 Helix-turn-helix M654_015730 PF12389 Camelysin metallo-endopeptidase M654_015745 PF13028 Protein of unknown function (DUF3889) M654_015750 PF14038 YqzE-like protein M654_015760 PF15980 Putative Competence protein ComGF M654_015770 PF07963 Prokaryotic N-terminal methylation motif M654_015775 PF07963 Prokaryotic N-terminal methylation motif M654_015780 PF00482 Type II secretion system (T2SS), protein F M654_015785 PF00437 Type II/IV secretion system protein M654_015790 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain M654_015790 PF01740 STAS domain M654_015800 PF03960 ArsC family M654_015805 PF11117 Protein of unknown function (DUF2626) M654_015810 PF00753 Metallo-beta-lactamase superfamily M654_015815 PF10958 Protein of unknown function (DUF2759) M654_015820 PF01910 Thiamine-binding protein M654_015830 PF00246 Zinc carboxypeptidase M654_015850 PF01497 Periplasmic binding protein M654_015855 PF00884 Sulfatase M654_015860 PF00480 ROK family M654_015865 PF06014 Bacterial protein of unknown function (DUF910) M654_015870 PF03323 Bacillus/Clostridium GerA spore germination protein M654_015875 PF01694 Rhomboid family M654_015880 PF01812 5-formyltetrahydrofolate cyclo-ligase family M654_015885 PF00471 Ribosomal protein L33 M654_015890 PF00534 Glycosyl transferases group 1 M654_015890 PF13439 Glycosyltransferase Family 4 M654_015910 PF00005 ABC transporter M654_015915 PF00005 ABC transporter M654_015920 PF00528 Binding-protein-dependent transport system inner membrane component M654_015925 PF00528 Binding-protein-dependent transport system inner membrane component M654_015930 PF12849 PBP superfamily domain M654_015940 PF07690 Major Facilitator Superfamily M654_015945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M654_015945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M654_015950 PF04306 Protein of unknown function (DUF456) M654_015955 PF06691 Protein of unknown function (DUF1189) M654_015965 PF04551 GcpE protein M654_015980 PF01475 Ferric uptake regulator family M654_015985 PF00950 ABC 3 transport family M654_015990 PF00005 ABC transporter M654_015995 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M654_015995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M654_016000 PF11116 Protein of unknown function (DUF2624) M654_016005 PF01261 Xylose isomerase-like TIM barrel M654_016010 PF00271 Helicase conserved C-terminal domain M654_016010 PF00270 DEAD/DEAH box helicase M654_016020 PF02401 LytB protein M654_016025 PF00999 Sodium/hydrogen exchanger family M654_016030 PF01784 NIF3 (NGG1p interacting factor 3) M654_016035 PF04816 tRNA (adenine(22)-N(1))-methyltransferase M654_016040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M654_016045 PF04542 Sigma-70 region 2 M654_016045 PF04545 Sigma-70, region 4 M654_016045 PF04539 Sigma-70 region 3 M654_016045 PF03979 Sigma-70 factor, region 1.1 M654_016045 PF00140 Sigma-70 factor, region 1.2 M654_016050 PF08275 DNA primase catalytic core, N-terminal domain M654_016050 PF01807 CHC2 zinc finger M654_016050 PF10410 DnaB-helicase binding domain of primase M654_016055 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M654_016060 PF03618 Kinase/pyrophosphorylase M654_016065 PF00571 CBS domain M654_016065 PF08279 HTH domain M654_016070 PF02092 Glycyl-tRNA synthetase beta subunit M654_016075 PF02091 Glycyl-tRNA synthetase alpha subunit M654_016080 PF11967 Recombination protein O N terminal M654_016080 PF02565 Recombination protein O C terminal M654_016085 PF14006 YqzL-like protein M654_016090 PF07650 KH domain M654_016090 PF01926 50S ribosome-binding GTPase M654_016095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M654_016100 PF01219 Prokaryotic diacylglycerol kinase M654_016105 PF02130 Uncharacterized protein family UPF0054 M654_016110 PF01966 HD domain M654_016110 PF07697 7TM-HD extracellular M654_016110 PF07698 7TM receptor with intracellular HD hydrolase M654_016115 PF02562 PhoH-like protein M654_016120 PF06898 Putative stage IV sporulation protein YqfD M654_016125 PF07873 YabP family M654_016135 PF12127 SigmaW regulon antibacterial M654_016140 PF01957 NfeD-like C-terminal, partner-binding M654_016140 PF01972 Serine dehydrogenase proteinase M654_016145 PF09424 Yqey-like protein M654_016150 PF01165 Ribosomal protein S21 M654_016155 PF02690 Na+/Pi-cotransporter M654_016160 PF04055 Radical SAM superfamily M654_016160 PF00919 Uncharacterized protein family UPF0004 M654_016160 PF01938 TRAM domain M654_016165 PF04452 RNA methyltransferase M654_016175 PF01556 DnaJ C terminal domain M654_016175 PF00226 DnaJ domain M654_016175 PF00684 DnaJ central domain M654_016180 PF00012 Hsp70 protein M654_016185 PF01025 GrpE M654_016190 PF01628 HrcA protein C terminal domain M654_016195 PF06969 HemN C-terminal domain M654_016195 PF04055 Radical SAM superfamily M654_016200 PF03144 Elongation factor Tu domain 2 M654_016200 PF00009 Elongation factor Tu GTP binding domain M654_016200 PF00679 Elongation factor G C-terminus M654_016200 PF06421 GTP-binding protein LepA C-terminus M654_016205 PF12438 Protein of unknown function (DUF3679) M654_016210 PF07454 Stage II sporulation protein P (SpoIIP) M654_016215 PF03418 Germination protease M654_016220 PF01649 Ribosomal protein S20 M654_016230 PF06144 DNA polymerase III, delta subunit M654_016235 PF14141 YqzM-like protein M654_016240 PF03772 Competence protein M654_016240 PF13567 Domain of unknown function (DUF4131) M654_016240 PF00753 Metallo-beta-lactamase superfamily M654_016245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M654_016250 PF10531 SLBB domain M654_016255 PF14748 Pyrroline-5-carboxylate reductase dimerisation M654_016255 PF03807 NADP oxidoreductase coenzyme F420-dependent M654_016260 PF13649 Methyltransferase domain M654_016270 PF01966 HD domain M654_016275 PF01467 Cytidylyltransferase-like M654_016280 PF01985 CRS1 / YhbY (CRM) domain M654_016285 PF08501 Shikimate dehydrogenase substrate binding domain M654_016285 PF01488 Shikimate / quinate 5-dehydrogenase M654_016285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M654_016290 PF01926 50S ribosome-binding GTPase M654_016300 PF08970 Sporulation inhibitor A M654_016305 PF00657 GDSL-like Lipase/Acylhydrolase M654_016315 PF10057 Uncharacterized conserved protein (DUF2294) M654_016320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M654_016320 PF01568 Molydopterin dinucleotide binding domain M654_016320 PF00384 Molybdopterin oxidoreductase M654_016320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M654_016320 PF00037 4Fe-4S binding domain M654_016325 PF07849 Protein of unknown function (DUF1641) M654_016335 PF04545 Sigma-70, region 4 M654_016335 PF04542 Sigma-70 region 2 M654_016345 PF00583 Acetyltransferase (GNAT) family M654_016380 PF00701 Dihydrodipicolinate synthetase family M654_016385 PF04299 Putative FMN-binding domain M654_016390 PF00392 Bacterial regulatory proteins, gntR family M654_016390 PF00155 Aminotransferase class I and II M654_016400 PF02272 DHHA1 domain M654_016400 PF01411 tRNA synthetases class II (A) M654_016400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M654_016410 PF01042 Endoribonuclease L-PSP M654_016415 PF00710 Asparaginase, N-terminal M654_016415 PF17763 Glutaminase/Asparaginase C-terminal domain M654_016420 PF00291 Pyridoxal-phosphate dependent enzyme M654_016425 PF01042 Endoribonuclease L-PSP M654_016470 PF04237 YjbR M654_016480 PF06445 GyrI-like small molecule binding domain M654_016480 PF13411 MerR HTH family regulatory protein M654_016490 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M654_016490 PF11611 Domain of unknown function (DUF4352) M654_016495 PF00245 Alkaline phosphatase M654_016500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M654_016505 PF00528 Binding-protein-dependent transport system inner membrane component M654_016510 PF00528 Binding-protein-dependent transport system inner membrane component M654_016515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_016515 PF00005 ABC transporter M654_016520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_016520 PF00005 ABC transporter M654_016525 PF00487 Fatty acid desaturase M654_016530 PF07730 Histidine kinase M654_016535 PF00196 Bacterial regulatory proteins, luxR family M654_016535 PF00072 Response regulator receiver domain M654_016540 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_016550 PF02492 CobW/HypB/UreG, nucleotide-binding domain M654_016550 PF07683 Cobalamin synthesis protein cobW C-terminal domain M654_016555 PF00753 Metallo-beta-lactamase superfamily M654_016560 PF01809 Putative membrane protein insertion efficiency factor M654_016565 PF00490 Delta-aminolevulinic acid dehydratase M654_016570 PF01592 NifU-like N terminal domain M654_016575 PF01297 Zinc-uptake complex component A periplasmic M654_016580 PF00005 ABC transporter M654_016585 PF00950 ABC 3 transport family M654_016590 PF14552 Tautomerase enzyme M654_016600 PF12833 Helix-turn-helix domain M654_016600 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M654_016605 PF00106 short chain dehydrogenase M654_016610 PF05901 Excalibur calcium-binding domain M654_016610 PF00565 Staphylococcal nuclease homologue M654_016620 PF00403 Heavy-metal-associated domain M654_016625 PF01022 Bacterial regulatory protein, arsR family M654_016630 PF12706 Beta-lactamase superfamily domain M654_016640 PF01925 Sulfite exporter TauE/SafE M654_016645 PF00753 Metallo-beta-lactamase superfamily M654_016655 PF00196 Bacterial regulatory proteins, luxR family M654_016655 PF00072 Response regulator receiver domain M654_016660 PF07730 Histidine kinase M654_016660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_016670 PF00135 Carboxylesterase family M654_016680 PF00067 Cytochrome P450 M654_016685 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M654_016685 PF04616 Glycosyl hydrolases family 43 M654_016695 PF00106 short chain dehydrogenase M654_016700 PF08244 Glycosyl hydrolases family 32 C terminal M654_016700 PF00251 Glycosyl hydrolases family 32 N-terminal domain M654_016705 PF03613 PTS system mannose/fructose/sorbose family IID component M654_016710 PF03609 PTS system sorbose-specific iic component M654_016715 PF03830 PTS system sorbose subfamily IIB component M654_016720 PF03610 PTS system fructose IIA component M654_016725 PF03610 PTS system fructose IIA component M654_016725 PF00158 Sigma-54 interaction domain M654_016725 PF00874 PRD domain M654_016730 PF11208 Protein of unknown function (DUF2992) M654_016750 PF07690 Major Facilitator Superfamily M654_016755 PF14145 YrhK-like protein M654_016760 PF03795 YCII-related domain M654_016770 PF00302 Chloramphenicol acetyltransferase M654_016775 PF12833 Helix-turn-helix domain M654_016775 PF02805 Metal binding domain of Ada M654_016780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M654_016780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M654_016785 PF02702 Osmosensitive K+ channel His kinase sensor domain M654_016790 PF02669 K+-transporting ATPase, c chain M654_016800 PF03814 Potassium-transporting ATPase A subunit M654_016810 PF00248 Aldo/keto reductase family M654_016815 PF07690 Major Facilitator Superfamily M654_016820 PF01638 HxlR-like helix-turn-helix M654_016825 PF03575 Peptidase family S51 M654_016830 PF02602 Uroporphyrinogen-III synthase HemD M654_016835 PF07883 Cupin domain M654_016840 PF01497 Periplasmic binding protein M654_016870 PF07690 Major Facilitator Superfamily M654_016875 PF00667 FAD binding domain M654_016875 PF00258 Flavodoxin M654_016875 PF00175 Oxidoreductase NAD-binding domain M654_016875 PF00067 Cytochrome P450 M654_016880 PF00440 Bacterial regulatory proteins, tetR family M654_016880 PF16295 Tetracyclin repressor-like, C-terminal domain M654_016885 PF08241 Methyltransferase domain M654_016895 PF09501 Probable sporulation protein (Bac_small_yrzI) M654_016900 PF14143 YrhC-like protein M654_016905 PF01053 Cys/Met metabolism PLP-dependent enzyme M654_016910 PF00291 Pyridoxal-phosphate dependent enzyme M654_016915 PF01048 Phosphorylase superfamily M654_016920 PF13649 Methyltransferase domain M654_016925 PF10750 Protein of unknown function (DUF2536) M654_016930 PF07423 Domain of unknown function (DUF1510) M654_016935 PF03717 Penicillin-binding Protein dimerisation domain M654_016935 PF00905 Penicillin binding protein transpeptidase domain M654_016940 PF03449 Transcription elongation factor, N-terminal M654_016940 PF01272 Transcription elongation factor, GreA/GreB, C-term M654_016945 PF00485 Phosphoribulokinase / Uridine kinase family M654_016960 PF01596 O-methyltransferase M654_016965 PF02618 YceG-like family M654_016970 PF06949 Protein of unknown function (DUF1292) M654_016975 PF03652 Holliday junction resolvase M654_016980 PF06135 IreB regulatory phosphoprotein M654_016985 PF02272 DHHA1 domain M654_016985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M654_016985 PF01411 tRNA synthetases class II (A) M654_016990 PF01594 AI-2E family transporter M654_016995 PF13056 Protein of unknown function (DUF3918) M654_017005 PF05239 PRC-barrel domain M654_017010 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain M654_017010 PF14490 Helix-hairpin-helix containing domain M654_017010 PF13538 UvrD-like helicase C-terminal domain M654_017015 PF13181 Tetratricopeptide repeat M654_017015 PF07719 Tetratricopeptide repeat M654_017025 PF00266 Aminotransferase class-V M654_017030 PF02082 Transcriptional regulator M654_017035 PF12002 MgsA AAA+ ATPase C terminal M654_017035 PF05496 Holliday junction DNA helicase RuvB P-loop domain M654_017035 PF16193 AAA C-terminal domain M654_017040 PF00899 ThiF family M654_017050 PF02938 GAD domain M654_017050 PF00152 tRNA synthetases class II (D, K and N) M654_017050 PF01336 OB-fold nucleic acid binding domain M654_017055 PF13393 Histidyl-tRNA synthetase M654_017055 PF03129 Anticodon binding domain M654_017065 PF01520 N-acetylmuramoyl-L-alanine amidase M654_017065 PF08239 Bacterial SH3 domain M654_017070 PF02580 D-Tyr-tRNA(Tyr) deacylase M654_017075 PF04607 Region found in RelA / SpoT proteins M654_017075 PF13291 ACT domain M654_017075 PF02824 TGS domain M654_017080 PF00156 Phosphoribosyl transferase domain M654_017085 PF01368 DHH family M654_017085 PF02272 DHHA1 domain M654_017085 PF17768 RecJ OB domain M654_017085 PF10141 Single-strand DNA-specific exonuclease, C terminal domain M654_017090 PF06305 Lipopolysaccharide assembly protein A domain M654_017095 PF02355 Protein export membrane protein M654_017095 PF07549 SecD/SecF GG Motif M654_017100 PF13797 Post-transcriptional regulator M654_017105 PF14667 Polysaccharide biosynthesis C-terminal domain M654_017105 PF01943 Polysaccharide biosynthesis protein M654_017110 PF04239 Protein of unknown function (DUF421) M654_017115 PF12670 Protein of unknown function (DUF3792) M654_017120 PF02699 Preprotein translocase subunit M654_017125 PF01702 Queuine tRNA-ribosyltransferase M654_017130 PF02547 Queuosine biosynthesis protein M654_017135 PF11146 Protein of unknown function (DUF2905) M654_017140 PF17864 RuvB AAA lid domain M654_017140 PF05496 Holliday junction DNA helicase RuvB P-loop domain M654_017140 PF05491 RuvB C-terminal winged helix domain M654_017145 PF07499 RuvA, C-terminal domain M654_017145 PF01330 RuvA N terminal domain M654_017150 PF08977 Bypass of Forespore C, N terminal M654_017150 PF08955 BofC C-terminal domain M654_017160 PF08141 Small acid-soluble spore protein H family M654_017165 PF05163 DinB family M654_017170 PF05908 Poly-gamma-glutamate hydrolase M654_017185 PF01709 Transcriptional regulator M654_017190 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M654_017195 PF01476 LysM domain M654_017200 PF02445 Quinolinate synthetase A protein M654_017205 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M654_017205 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M654_017210 PF00890 FAD binding domain M654_017210 PF02910 Fumarate reductase flavoprotein C-term M654_017215 PF00266 Aminotransferase class-V M654_017220 PF08279 HTH domain M654_017220 PF02829 3H domain M654_017225 PF00800 Prephenate dehydratase M654_017225 PF01842 ACT domain M654_017230 PF01842 ACT domain M654_017235 PF01018 GTP1/OBG M654_017235 PF01926 50S ribosome-binding GTPase M654_017235 PF09269 Domain of unknown function (DUF1967) M654_017240 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M654_017240 PF14682 Sporulation initiation phospho-transferase B, C-terminal M654_017245 PF01016 Ribosomal L27 protein M654_017250 PF04327 Cysteine protease Prp M654_017255 PF00829 Ribosomal prokaryotic L21 protein M654_017260 PF02163 Peptidase family M50 M654_017265 PF01551 Peptidase family M23 M654_017270 PF08327 Activator of Hsp90 ATPase homolog 1-like protein M654_017275 PF01022 Bacterial regulatory protein, arsR family M654_017280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M654_017285 PF03775 Septum formation inhibitor MinC, C-terminal domain M654_017290 PF04093 rod shape-determining protein MreD M654_017295 PF04085 rod shape-determining protein MreC M654_017305 PF04002 RadC-like JAB domain M654_017310 PF02545 Maf-like protein M654_017315 PF05036 Sporulation related domain M654_017320 PF01478 Type IV leader peptidase family M654_017320 PF06750 Bacterial Peptidase A24 N-terminal domain M654_017325 PF08245 Mur ligase middle domain M654_017325 PF02875 Mur ligase family, glutamate ligase domain M654_017330 PF00133 tRNA synthetases class I (I, L, M and V) M654_017330 PF10458 Valyl tRNA synthetase tRNA binding arm M654_017330 PF08264 Anticodon-binding domain of tRNA M654_017345 PF01476 LysM domain M654_017350 PF00202 Aminotransferase class-III M654_017355 PF00490 Delta-aminolevulinic acid dehydratase M654_017360 PF02602 Uroporphyrinogen-III synthase HemD M654_017365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M654_017365 PF03900 Porphobilinogen deaminase, C-terminal domain M654_017370 PF01578 Cytochrome C assembly protein M654_017375 PF01488 Shikimate / quinate 5-dehydrogenase M654_017375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M654_017375 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M654_017385 PF01926 50S ribosome-binding GTPase M654_017390 PF02190 ATP-dependent protease La (LON) substrate-binding domain M654_017390 PF00004 ATPase family associated with various cellular activities (AAA) M654_017390 PF05362 Lon protease (S16) C-terminal proteolytic domain M654_017395 PF00004 ATPase family associated with various cellular activities (AAA) M654_017395 PF05362 Lon protease (S16) C-terminal proteolytic domain M654_017400 PF06689 ClpX C4-type zinc finger M654_017400 PF10431 C-terminal, D2-small domain, of ClpB protein M654_017400 PF07724 AAA domain (Cdc48 subfamily) M654_017405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M654_017405 PF05698 Bacterial trigger factor protein (TF) C-terminus M654_017405 PF05697 Bacterial trigger factor protein (TF) M654_017415 PF00694 Aconitase C-terminal domain M654_017420 PF00330 Aconitase family (aconitate hydratase) M654_017425 PF00180 Isocitrate/isopropylmalate dehydrogenase M654_017430 PF00682 HMGL-like M654_017430 PF08502 LeuA allosteric (dimerisation) domain M654_017435 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M654_017435 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M654_017440 PF10369 Small subunit of acetolactate synthase M654_017440 PF01842 ACT domain M654_017445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M654_017445 PF00205 Thiamine pyrophosphate enzyme, central domain M654_017445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M654_017450 PF01063 Amino-transferase class IV M654_017460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M654_017460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M654_017485 PF12850 Calcineurin-like phosphoesterase superfamily domain M654_017490 PF01725 Ham1 family M654_017495 PF03725 3' exoribonuclease family, domain 2 M654_017495 PF01138 3' exoribonuclease family, domain 1 M654_017500 PF10646 Sporulation and spore germination M654_017505 PF01177 Asp/Glu/Hydantoin racemase M654_017510 PF01047 MarR family M654_017515 PF00196 Bacterial regulatory proteins, luxR family M654_017520 PF00106 short chain dehydrogenase M654_017525 PF03061 Thioesterase superfamily M654_017530 PF13183 4Fe-4S dicluster domain M654_017530 PF13085 2Fe-2S iron-sulfur cluster binding domain M654_017535 PF00890 FAD binding domain M654_017535 PF02910 Fumarate reductase flavoprotein C-term M654_017540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M654_017545 PF10702 Protein of unknown function (DUF2507) M654_017555 PF01842 ACT domain M654_017555 PF13840 ACT domain M654_017555 PF00696 Amino acid kinase family M654_017560 PF02151 UvrB/uvrC motif M654_017560 PF01541 GIY-YIG catalytic domain M654_017560 PF08459 UvrC Helix-hairpin-helix N-terminal M654_017565 PF00085 Thioredoxin M654_017570 PF01012 Electron transfer flavoprotein domain M654_017570 PF00766 Electron transfer flavoprotein FAD-binding domain M654_017575 PF01012 Electron transfer flavoprotein domain M654_017580 PF00378 Enoyl-CoA hydratase/isomerase M654_017585 PF08359 YsiA-like protein, C-terminal region M654_017585 PF00440 Bacterial regulatory proteins, tetR family M654_017590 PF13193 AMP-binding enzyme C-terminal domain M654_017590 PF00501 AMP-binding enzyme M654_017595 PF03994 Domain of Unknown Function (DUF350) M654_017600 PF00488 MutS domain V M654_017600 PF01713 Smr domain M654_017605 PF14791 DNA polymerase beta thumb M654_017605 PF14716 Helix-hairpin-helix domain M654_017605 PF02811 PHP domain M654_017610 PF02674 Colicin V production protein M654_017615 PF05164 Cell division protein ZapA M654_017620 PF11858 Domain of unknown function (DUF3378) M654_017620 PF01351 Ribonuclease HII M654_017635 PF03483 B3/4 domain M654_017635 PF03484 tRNA synthetase B5 domain M654_017635 PF01588 Putative tRNA binding domain M654_017635 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M654_017635 PF03147 Ferredoxin-fold anticodon binding domain M654_017640 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M654_017640 PF01409 tRNA synthetases class II core domain (F) M654_017645 PF08032 RNA 2'-O ribose methyltransferase substrate binding M654_017645 PF00588 SpoU rRNA Methylase family M654_017650 PF14098 Small, acid-soluble spore protein I M654_017655 PF13722 5TM C-terminal transporter carbon starvation CstA M654_017655 PF02554 Carbon starvation protein CstA M654_017660 PF00440 Bacterial regulatory proteins, tetR family M654_017665 PF03703 Bacterial PH domain M654_017680 PF06964 Alpha-L-arabinofuranosidase C-terminal domain M654_017685 PF00528 Binding-protein-dependent transport system inner membrane component M654_017690 PF00528 Binding-protein-dependent transport system inner membrane component M654_017695 PF01547 Bacterial extracellular solute-binding protein M654_017700 PF13685 Iron-containing alcohol dehydrogenase M654_017705 PF00596 Class II Aldolase and Adducin N-terminal domain M654_017710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M654_017710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M654_017715 PF02610 L-arabinose isomerase M654_017715 PF11762 L-arabinose isomerase C-terminal domain M654_017720 PF04616 Glycosyl hydrolases family 43 M654_017725 PF05343 M42 glutamyl aminopeptidase M654_017735 PF06961 Protein of unknown function (DUF1294) M654_017740 PF00453 Ribosomal protein L20 M654_017745 PF01632 Ribosomal protein L35 M654_017750 PF05198 Translation initiation factor IF-3, N-terminal domain M654_017750 PF00707 Translation initiation factor IF-3, C-terminal domain M654_017755 PF16655 PhoD-like phosphatase, N-terminal domain M654_017755 PF09423 PhoD-like phosphatase M654_017760 PF13419 Haloacid dehalogenase-like hydrolase M654_017765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M654_017765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M654_017765 PF02824 TGS domain M654_017765 PF03129 Anticodon binding domain M654_017770 PF08812 YtxC-like family M654_017775 PF09335 SNARE associated Golgi protein M654_017780 PF07319 Primosomal protein DnaI N-terminus M654_017780 PF01695 IstB-like ATP binding protein M654_017785 PF07261 Replication initiation and membrane attachment M654_017790 PF03477 ATP cone domain M654_017800 PF02675 S-adenosylmethionine decarboxylase M654_017805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M654_017805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M654_017810 PF00544 Pectate lyase M654_017815 PF01121 Dephospho-CoA kinase M654_017820 PF02659 Putative manganese efflux pump M654_017825 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M654_017825 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M654_017825 PF06827 Zinc finger found in FPG and IleRS M654_017830 PF00476 DNA polymerase family A M654_017830 PF01367 5'-3' exonuclease, C-terminal SAM fold M654_017830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M654_017835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_017835 PF00512 His Kinase A (phospho-acceptor) domain M654_017835 PF16736 Single Cache-like M654_017835 PF00989 PAS fold M654_017840 PF00486 Transcriptional regulatory protein, C terminal M654_017840 PF00072 Response regulator receiver domain M654_017845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M654_017845 PF00056 lactate/malate dehydrogenase, NAD binding domain M654_017850 PF00180 Isocitrate/isopropylmalate dehydrogenase M654_017855 PF00285 Citrate synthase, C-terminal domain M654_017860 PF04284 Protein of unknown function (DUF441) M654_017865 PF01594 AI-2E family transporter M654_017870 PF04186 FxsA cytoplasmic membrane protein M654_017875 PF02887 Pyruvate kinase, alpha/beta domain M654_017875 PF00224 Pyruvate kinase, barrel domain M654_017875 PF00391 PEP-utilising enzyme, mobile domain M654_017880 PF00365 Phosphofructokinase M654_017885 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M654_017890 PF01039 Carboxyl transferase domain M654_017890 PF17848 Acetyl-coA carboxylase zinc finger domain M654_017895 PF00390 Malic enzyme, N-terminal domain M654_017895 PF03949 Malic enzyme, NAD binding domain M654_017900 PF01336 OB-fold nucleic acid binding domain M654_017900 PF14579 Helix-hairpin-helix motif M654_017900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M654_017900 PF07733 Bacterial DNA polymerase III alpha NTPase domain M654_017900 PF02811 PHP domain M654_017905 PF14034 Sporulation protein YtrH M654_017920 PF01368 DHH family M654_017920 PF02272 DHHA1 domain M654_017925 PF14007 YtpI-like protein M654_017930 PF03061 Thioesterase superfamily M654_017930 PF00571 CBS domain M654_017930 PF00392 Bacterial regulatory proteins, gntR family M654_017930 PF07085 DRTGG domain M654_017935 PF10400 Virulence activator alpha C-term M654_017935 PF03551 Transcriptional regulator PadR-like family M654_017955 PF14698 Argininosuccinate lyase C-terminal M654_017955 PF00206 Lyase M654_017960 PF00764 Arginosuccinate synthase M654_017965 PF00994 Probable molybdopterin binding domain M654_017970 PF00871 Acetokinase family M654_017975 PF02384 N-6 DNA Methylase M654_017980 PF08534 Redoxin M654_017985 PF09579 Sporulation protein YtfJ (Spore_YtfJ) M654_017990 PF11167 Protein of unknown function (DUF2953) M654_017995 PF06271 RDD family M654_018000 PF01343 Peptidase family S49 M654_018005 PF01513 ATP-NAD kinase M654_018015 PF07690 Major Facilitator Superfamily M654_018020 PF01047 MarR family M654_018025 PF00501 AMP-binding enzyme M654_018025 PF13193 AMP-binding enzyme C-terminal domain M654_018030 PF00269 Small, acid-soluble spore proteins, alpha/beta type M654_018035 PF02568 Thiamine biosynthesis protein (ThiI) M654_018035 PF02926 THUMP domain M654_018040 PF00266 Aminotransferase class-V M654_018045 PF05525 Branched-chain amino acid transport protein M654_018050 PF06160 Septation ring formation regulator, EzrA M654_018055 PF02811 PHP domain M654_018060 PF00440 Bacterial regulatory proteins, tetR family M654_018065 PF13185 GAF domain M654_018070 PF00990 Diguanylate cyclase, GGDEF domain M654_018075 PF00163 Ribosomal protein S4/S9 N-terminal domain M654_018075 PF01479 S4 domain M654_018090 PF01037 Lrp/AsnC ligand binding domain M654_018095 PF01479 S4 domain M654_018095 PF00579 tRNA synthetases class I (W and Y) M654_018100 PF00501 AMP-binding enzyme M654_018100 PF13193 AMP-binding enzyme C-terminal domain M654_018105 PF00583 Acetyltransferase (GNAT) family M654_018110 PF00571 CBS domain M654_018115 PF00850 Histone deacetylase domain M654_018120 PF13677 Membrane MotB of proton-channel complex MotA/MotB M654_018120 PF00691 OmpA family M654_018125 PF01618 MotA/TolQ/ExbB proton channel family M654_018130 PF00356 Bacterial regulatory proteins, lacI family M654_018135 PF00793 DAHP synthetase I family M654_018135 PF01817 Chorismate mutase type II M654_018145 PF11009 Protein of unknown function (DUF2847) M654_018150 PF12732 YtxH-like protein M654_018155 PF06103 Bacterial protein of unknown function (DUF948) M654_018160 PF08245 Mur ligase middle domain M654_018160 PF02875 Mur ligase family, glutamate ligase domain M654_018160 PF01225 Mur ligase family, catalytic domain M654_018165 PF17854 FtsK alpha domain M654_018165 PF09397 Ftsk gamma domain M654_018165 PF01580 FtsK/SpoIIIE family M654_018170 PF14794 Domain of unknown function (DUF4479) M654_018170 PF01588 Putative tRNA binding domain M654_018175 PF07285 Protein of unknown function (DUF1444) M654_018180 PF00085 Thioredoxin M654_018185 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ M654_018190 PF05343 M42 glutamyl aminopeptidase M654_018195 PF03413 Peptidase propeptide and YPEB domain M654_018200 PF00390 Malic enzyme, N-terminal domain M654_018200 PF03949 Malic enzyme, NAD binding domain M654_018205 PF00753 Metallo-beta-lactamase superfamily M654_018210 PF02390 Putative methyltransferase M654_018215 PF14165 YtzH-like protein M654_018220 PF01636 Phosphotransferase enzyme family M654_018225 PF17999 Pullulanase N1-terminal domain M654_018225 PF00128 Alpha amylase, catalytic domain M654_018225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M654_018230 PF00781 Diacylglycerol kinase catalytic domain M654_018245 PF00291 Pyridoxal-phosphate dependent enzyme M654_018250 PF12832 MFS_1 like family M654_018255 PF01546 Peptidase family M20/M25/M40 M654_018260 PF00860 Permease family M654_018265 PF05975 Bacterial ABC transporter protein EcsB M654_018270 PF00005 ABC transporter M654_018275 PF08220 DeoR-like helix-turn-helix domain M654_018280 PF01479 S4 domain M654_018280 PF00849 RNA pseudouridylate synthase M654_018285 PF01943 Polysaccharide biosynthesis protein M654_018285 PF14667 Polysaccharide biosynthesis C-terminal domain M654_018295 PF02028 BCCT, betaine/carnitine/choline family transporter M654_018305 PF10957 Sporulation protein Cse60 M654_018310 PF00581 Rhodanese-like domain M654_018315 PF18801 response regulator aspartate phosphatase H, N terminal M654_018325 PF04854 Protein of unknown function, DUF624 M654_018330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M654_018330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M654_018340 PF07470 Glycosyl Hydrolase Family 88 M654_018345 PF00528 Binding-protein-dependent transport system inner membrane component M654_018350 PF17853 GGDEF-like domain M654_018350 PF12833 Helix-turn-helix domain M654_018355 PF13416 Bacterial extracellular solute-binding protein M654_018360 PF00528 Binding-protein-dependent transport system inner membrane component M654_018365 PF01370 NAD dependent epimerase/dehydratase family M654_018370 PF01738 Dienelactone hydrolase family M654_018380 PF03466 LysR substrate binding domain M654_018380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_018385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_018390 PF08264 Anticodon-binding domain of tRNA M654_018390 PF13603 Leucyl-tRNA synthetase, Domain 2 M654_018390 PF00133 tRNA synthetases class I (I, L, M and V) M654_018390 PF09334 tRNA synthetases class I (M) M654_018395 PF14074 Protein of unknown function (DUF4257) M654_018400 PF07690 Major Facilitator Superfamily M654_018410 PF04791 LMBR1-like membrane protein M654_018415 PF12704 MacB-like periplasmic core domain M654_018415 PF02687 FtsX-like permease family M654_018420 PF00005 ABC transporter M654_018425 PF00664 ABC transporter transmembrane region M654_018425 PF03412 Peptidase C39 family M654_018425 PF00005 ABC transporter M654_018435 PF00196 Bacterial regulatory proteins, luxR family M654_018435 PF00072 Response regulator receiver domain M654_018445 PF02687 FtsX-like permease family M654_018445 PF12704 MacB-like periplasmic core domain M654_018450 PF00005 ABC transporter M654_018460 PF00005 ABC transporter M654_018465 PF00392 Bacterial regulatory proteins, gntR family M654_018485 PF00664 ABC transporter transmembrane region M654_018485 PF00005 ABC transporter M654_018485 PF03412 Peptidase C39 family M654_018495 PF04604 Type-A lantibiotic M654_018500 PF04604 Type-A lantibiotic M654_018505 PF02687 FtsX-like permease family M654_018510 PF00005 ABC transporter M654_018525 PF00005 ABC transporter M654_018530 PF10732 Protein of unknown function (DUF2524) M654_018535 PF16199 Radical_SAM C-terminal domain M654_018535 PF04055 Radical SAM superfamily M654_018540 PF06962 Putative rRNA methylase M654_018545 PF10776 Protein of unknown function (DUF2600) M654_018550 PF12146 Serine aminopeptidase, S33 M654_018555 PF00132 Bacterial transferase hexapeptide (six repeats) M654_018560 PF01569 PAP2 superfamily M654_018565 PF13439 Glycosyltransferase Family 4 M654_018565 PF00534 Glycosyl transferases group 1 M654_018570 PF00733 Asparagine synthase M654_018570 PF13537 Glutamine amidotransferase domain M654_018575 PF00438 S-adenosylmethionine synthetase, N-terminal domain M654_018575 PF02772 S-adenosylmethionine synthetase, central domain M654_018575 PF02773 S-adenosylmethionine synthetase, C-terminal domain M654_018580 PF01293 Phosphoenolpyruvate carboxykinase M654_018590 PF10763 Protein of unknown function (DUF2584) M654_018595 PF00326 Prolyl oligopeptidase family M654_018605 PF00005 ABC transporter M654_018610 PF00528 Binding-protein-dependent transport system inner membrane component M654_018615 PF00293 NUDIX domain M654_018625 PF05105 Bacteriophage holin family M654_018630 PF00210 Ferritin-like domain M654_018640 PF13115 YtkA-like M654_018645 PF02664 S-Ribosylhomocysteinase (LuxS) M654_018650 PF01809 Putative membrane protein insertion efficiency factor M654_018655 PF00484 Carbonic anhydrase M654_018660 PF01297 Zinc-uptake complex component A periplasmic M654_018665 PF01197 Ribosomal protein L31 M654_018670 PF01654 Cytochrome bd terminal oxidase subunit I M654_018675 PF02322 Cytochrome bd terminal oxidase subunit II M654_018680 PF07561 Domain of Unknown Function (DUF1540) M654_018685 PF13378 Enolase C-terminal domain-like M654_018685 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M654_018690 PF00501 AMP-binding enzyme M654_018690 PF13193 AMP-binding enzyme C-terminal domain M654_018695 PF00378 Enoyl-CoA hydratase/isomerase M654_018700 PF00561 alpha/beta hydrolase fold M654_018705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M654_018705 PF16582 Middle domain of thiamine pyrophosphate M654_018705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M654_018710 PF00425 chorismate binding enzyme M654_018715 PF01040 UbiA prenyltransferase family M654_018720 PF01258 Prokaryotic dksA/traR C4-type zinc finger M654_018725 PF00343 Carbohydrate phosphorylase M654_018730 PF08323 Starch synthase catalytic domain M654_018730 PF00534 Glycosyl transferases group 1 M654_018735 PF00483 Nucleotidyl transferase M654_018740 PF00483 Nucleotidyl transferase M654_018745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M654_018745 PF02806 Alpha amylase, C-terminal all-beta domain M654_018745 PF00128 Alpha amylase, catalytic domain M654_018855 PF01812 5-formyltetrahydrofolate cyclo-ligase family M654_018905 PF18576 Helix-turn-helix domain M654_018905 PF14540 Nucleotidyltransferase-like M654_018910 PF11023 Zinc-ribbon containing domain M654_018915 PF01475 Ferric uptake regulator family M654_018920 PF00578 AhpC/TSA family M654_018925 PF00202 Aminotransferase class-III M654_018930 PF06081 Aromatic acid exporter family member 1 M654_018945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M654_018950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_018950 PF00005 ABC transporter M654_018955 PF00005 ABC transporter M654_018955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M654_018960 PF00005 ABC transporter M654_018960 PF00664 ABC transporter transmembrane region M654_018965 PF04167 Protein of unknown function (DUF402) M654_018970 PF14182 YgaB-like protein M654_018990 PF00730 HhH-GPD superfamily base excision DNA repair protein M654_018990 PF14815 NUDIX domain M654_018995 PF04307 LexA-binding, inner membrane-associated putative hydrolase M654_019000 PF09586 Bacterial membrane protein YfhO M654_019010 PF00535 Glycosyl transferase family 2 M654_019015 PF01266 FAD dependent oxidoreductase M654_019020 PF14043 WVELL protein M654_019025 PF08176 Small acid-soluble spore protein K family M654_019035 PF08838 Protein of unknown function (DUF1811) M654_019040 PF02631 RecX family M654_019045 PF01370 NAD dependent epimerase/dehydratase family M654_019045 PF08338 Domain of unknown function (DUF1731) M654_019060 PF14151 YfhD-like protein M654_019065 PF00881 Nitroreductase family M654_019070 PF02567 Phenazine biosynthesis-like protein M654_019075 PF03706 Lysylphosphatidylglycerol synthase TM region M654_019075 PF09924 Uncharacterised conserved protein (DUF2156) M654_019080 PF12867 DinB superfamily M654_019085 PF00293 NUDIX domain M654_019095 PF13416 Bacterial extracellular solute-binding protein M654_019100 PF12833 Helix-turn-helix domain M654_019105 PF04616 Glycosyl hydrolases family 43 M654_019105 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M654_019110 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M654_019110 PF04616 Glycosyl hydrolases family 43 M654_019115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_019120 PF07681 DoxX M654_019125 PF01638 HxlR-like helix-turn-helix M654_019135 PF02378 Phosphotransferase system, EIIC M654_019135 PF00367 phosphotransferase system, EIIB M654_019140 PF01380 SIS domain M654_019140 PF01418 Helix-turn-helix domain, rpiR family M654_019145 PF02056 Family 4 glycosyl hydrolase M654_019145 PF11975 Family 4 glycosyl hydrolase C-terminal domain M654_019150 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M654_019155 PF01590 GAF domain M654_019155 PF02954 Bacterial regulatory protein, Fis family M654_019155 PF00158 Sigma-54 interaction domain M654_019160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M654_019160 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_019165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M654_019165 PF02817 e3 binding domain M654_019165 PF00364 Biotin-requiring enzyme M654_019170 PF02779 Transketolase, pyrimidine binding domain M654_019170 PF02780 Transketolase, C-terminal domain M654_019175 PF00676 Dehydrogenase E1 component M654_019185 PF10057 Uncharacterized conserved protein (DUF2294) M654_019190 PF00361 Proton-conducting membrane transporter M654_019190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M654_019195 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) M654_019205 PF00874 PRD domain M654_019205 PF03123 CAT RNA binding domain M654_019210 PF00367 phosphotransferase system, EIIB M654_019210 PF02378 Phosphotransferase system, EIIC M654_019220 PF07690 Major Facilitator Superfamily M654_019225 PF10925 Protein of unknown function (DUF2680) M654_019245 PF05958 tRNA (Uracil-5-)-methyltransferase M654_019245 PF01938 TRAM domain M654_019250 PF00730 HhH-GPD superfamily base excision DNA repair protein M654_019255 PF01544 CorA-like Mg2+ transporter protein M654_019265 PF00465 Iron-containing alcohol dehydrogenase M654_019270 PF01522 Polysaccharide deacetylase M654_019280 PF08756 YfkB-like domain M654_019280 PF04055 Radical SAM superfamily M654_019285 PF14167 YfkD-like protein M654_019290 PF01699 Sodium/calcium exchanger protein M654_019300 PF07690 Major Facilitator Superfamily M654_019305 PF03631 Virulence factor BrkB M654_019315 PF01451 Low molecular weight phosphotyrosine protein phosphatase M654_019320 PF01235 Sodium:alanine symporter family M654_019325 PF06569 Protein of unknown function (DUF1128) M654_019330 PF01965 DJ-1/PfpI family M654_019335 PF02872 5'-nucleotidase, C-terminal domain M654_019335 PF00149 Calcineurin-like phosphoesterase M654_019340 PF00881 Nitroreductase family M654_019345 PF01638 HxlR-like helix-turn-helix M654_019355 PF00440 Bacterial regulatory proteins, tetR family M654_019360 PF00893 Small Multidrug Resistance protein M654_019365 PF17314 Family of unknown function (DUF5360) M654_019370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M654_019370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M654_019370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M654_019375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M654_019375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M654_019380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M654_019385 PF16363 GDP-mannose 4,6 dehydratase M654_019390 PF00535 Glycosyl transferase family 2 M654_019395 PF00534 Glycosyl transferases group 1 M654_019395 PF00862 Sucrose synthase M654_019400 PF01925 Sulfite exporter TauE/SafE M654_019405 PF13181 Tetratricopeptide repeat M654_019405 PF00535 Glycosyl transferase family 2 M654_019410 PF00535 Glycosyl transferase family 2 M654_019425 PF00132 Bacterial transferase hexapeptide (six repeats) M654_019430 PF00392 Bacterial regulatory proteins, gntR family M654_019430 PF07702 UTRA domain M654_019435 PF16657 Maltogenic Amylase, C-terminal domain M654_019435 PF00128 Alpha amylase, catalytic domain M654_019440 PF02378 Phosphotransferase system, EIIC M654_019440 PF00367 phosphotransferase system, EIIB M654_019450 PF01235 Sodium:alanine symporter family M654_019455 PF09350 Domain of unknown function (DUF1992) M654_019460 PF00884 Sulfatase M654_019465 PF00557 Metallopeptidase family M24 M654_019470 PF11121 Protein of unknown function (DUF2639) M654_019475 PF03475 3-alpha domain M654_019475 PF03473 MOSC domain M654_019480 PF00708 Acylphosphatase M654_019485 PF01022 Bacterial regulatory protein, arsR family M654_019490 PF13630 SdpI/YhfL protein family M654_019490 PF07853 Protein of unknown function (DUF1648) M654_019495 PF02898 Nitric oxide synthase, oxygenase domain M654_019505 PF00753 Metallo-beta-lactamase superfamily M654_019510 PF00753 Metallo-beta-lactamase superfamily M654_019520 PF00939 Sodium:sulfate symporter transmembrane region M654_019525 PF11181 Heat induced stress protein YflT M654_019530 PF11486 Protein of unknown function (DUF3212) M654_019535 PF16884 N-terminal domain of oxidoreductase M654_019535 PF00107 Zinc-binding dehydrogenase M654_019540 PF00271 Helicase conserved C-terminal domain M654_019540 PF00270 DEAD/DEAH box helicase M654_019545 PF12848 ABC transporter M654_019545 PF00005 ABC transporter M654_019550 PF07690 Major Facilitator Superfamily M654_019555 PF13411 MerR HTH family regulatory protein M654_019565 PF00067 Cytochrome P450 M654_019570 PF04055 Radical SAM superfamily M654_019570 PF06968 Biotin and Thiamin Synthesis associated domain M654_019580 PF00155 Aminotransferase class I and II M654_019585 PF00202 Aminotransferase class-III M654_019590 PF03744 6-carboxyhexanoate--CoA ligase M654_019595 PF02492 CobW/HypB/UreG, nucleotide-binding domain M654_019595 PF07683 Cobalamin synthesis protein cobW C-terminal domain M654_019610 PF02649 Type I GTP cyclohydrolase folE2 M654_019615 PF01965 DJ-1/PfpI family M654_019620 PF03466 LysR substrate binding domain M654_019620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_019625 PF16326 ABC transporter C-terminal domain M654_019625 PF00005 ABC transporter M654_019625 PF12848 ABC transporter M654_019630 PF00939 Sodium:sulfate symporter transmembrane region M654_019635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_019640 PF00171 Aldehyde dehydrogenase family M654_019650 PF01709 Transcriptional regulator M654_019655 PF00892 EamA-like transporter family M654_019675 PF18801 response regulator aspartate phosphatase H, N terminal M654_019705 PF12841 YvrJ protein family M654_019750 PF04740 LXG domain of WXG superfamily M654_019750 PF14449 Pre-toxin TG M654_019755 PF18801 response regulator aspartate phosphatase H, N terminal M654_019780 PF18801 response regulator aspartate phosphatase H, N terminal M654_019820 PF05866 Endodeoxyribonuclease RusA M654_019830 PF01938 TRAM domain M654_019830 PF05958 tRNA (Uracil-5-)-methyltransferase M654_019835 PF00781 Diacylglycerol kinase catalytic domain M654_019840 PF01156 Inosine-uridine preferring nucleoside hydrolase M654_019845 PF13302 Acetyltransferase (GNAT) domain M654_019850 PF00873 AcrB/AcrD/AcrF family M654_019855 PF00440 Bacterial regulatory proteins, tetR family M654_019860 PF08240 Alcohol dehydrogenase GroES-like domain M654_019860 PF00107 Zinc-binding dehydrogenase M654_019865 PF02156 Glycosyl hydrolase family 26 M654_019870 PF02934 GatB/GatE catalytic domain M654_019870 PF02637 GatB domain M654_019875 PF01425 Amidase M654_019880 PF02686 Glu-tRNAGln amidotransferase C subunit M654_019885 PF00474 Sodium:solute symporter family M654_019895 PF02308 MgtC family M654_019900 PF07537 CamS sex pheromone cAM373 precursor M654_019905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M654_019905 PF00533 BRCA1 C Terminus (BRCT) domain M654_019905 PF01653 NAD-dependent DNA ligase adenylation domain M654_019905 PF03120 NAD-dependent DNA ligase OB-fold domain M654_019905 PF12826 Helix-hairpin-helix motif M654_019910 PF13361 UvrD-like helicase C-terminal domain M654_019910 PF00580 UvrD/REP helicase N-terminal domain M654_019915 PF01884 PcrB family M654_019920 PF01371 Trp repressor protein M654_019925 PF17479 Protein of unknown function (DUF3048) C-terminal domain M654_019925 PF11258 Protein of unknown function (DUF3048) N-terminal domain M654_019930 PF13382 Adenine deaminase C-terminal domain M654_019930 PF01979 Amidohydrolase family M654_019935 PF11127 Protein of unknown function (DUF2892) M654_019940 PF00067 Cytochrome P450 M654_019950 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M654_019950 PF02843 Phosphoribosylglycinamide synthetase, C domain M654_019950 PF02844 Phosphoribosylglycinamide synthetase, N domain M654_019955 PF01808 AICARFT/IMPCHase bienzyme M654_019955 PF02142 MGS-like domain M654_019960 PF00551 Formyl transferase M654_019965 PF02769 AIR synthase related protein, C-terminal domain M654_019965 PF00586 AIR synthase related protein, N-terminal domain M654_019970 PF00156 Phosphoribosyl transferase domain M654_019975 PF02769 AIR synthase related protein, C-terminal domain M654_019975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M654_019975 PF00586 AIR synthase related protein, N-terminal domain M654_019985 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase M654_019990 PF01259 SAICAR synthetase M654_019995 PF10397 Adenylosuccinate lyase C-terminus M654_019995 PF00206 Lyase M654_020000 PF02222 ATP-grasp domain M654_020000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M654_020005 PF00731 AIR carboxylase M654_020010 PF14044 NETI protein M654_020015 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M654_020025 PF00860 Permease family M654_020030 PF07690 Major Facilitator Superfamily M654_020035 PF00155 Aminotransferase class I and II M654_020045 PF00206 Lyase M654_020045 PF02655 ATP-grasp domain M654_020055 PF00958 GMP synthase C terminal domain M654_020055 PF02540 NAD synthase M654_020055 PF00117 Glutamine amidotransferase class-I M654_020060 PF13559 Domain of unknown function (DUF4129) M654_020060 PF11992 Domain of unknown function (DUF3488) M654_020060 PF01841 Transglutaminase-like superfamily M654_020065 PF01882 Protein of unknown function DUF58 M654_020070 PF17863 AAA lid domain M654_020070 PF07726 ATPase family associated with various cellular activities (AAA) M654_020075 PF01545 Cation efflux family M654_020075 PF16916 Dimerisation domain of Zinc Transporter M654_020085 PF07732 Multicopper oxidase M654_020085 PF07731 Multicopper oxidase M654_020085 PF00394 Multicopper oxidase M654_020090 PF06445 GyrI-like small molecule binding domain M654_020090 PF12833 Helix-turn-helix domain M654_020095 PF13460 NAD(P)H-binding M654_020100 PF10502 Signal peptidase, peptidase S26 M654_020110 PF07676 WD40-like Beta Propeller Repeat M654_020115 PF03330 Lytic transglycolase M654_020135 PF13419 Haloacid dehalogenase-like hydrolase M654_020140 PF00128 Alpha amylase, catalytic domain M654_020140 PF16657 Maltogenic Amylase, C-terminal domain M654_020145 PF03632 Glycosyl hydrolase family 65 central catalytic domain M654_020145 PF03636 Glycosyl hydrolase family 65, N-terminal domain M654_020145 PF03633 Glycosyl hydrolase family 65, C-terminal domain M654_020150 PF06691 Protein of unknown function (DUF1189) M654_020155 PF00528 Binding-protein-dependent transport system inner membrane component M654_020160 PF00528 Binding-protein-dependent transport system inner membrane component M654_020165 PF13416 Bacterial extracellular solute-binding protein M654_020170 PF00128 Alpha amylase, catalytic domain M654_020170 PF02903 Alpha amylase, N-terminal ig-like domain M654_020175 PF00356 Bacterial regulatory proteins, lacI family M654_020180 PF00128 Alpha amylase, catalytic domain M654_020180 PF09154 Domain of unknown function (DUF1939) M654_020185 PF01522 Polysaccharide deacetylase M654_020185 PF13739 Deacetylase PdaC M654_020185 PF11738 Protein of unknown function (DUF3298) M654_020205 PF01810 LysE type translocator M654_020210 PF01978 Sugar-specific transcriptional regulator TrmB M654_020210 PF11495 Archaeal transcriptional regulator TrmB M654_020220 PF07690 Major Facilitator Superfamily M654_020225 PF00135 Carboxylesterase family M654_020230 PF00106 short chain dehydrogenase M654_020235 PF04343 Protein of unknown function, DUF488 M654_020245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M654_020245 PF00391 PEP-utilising enzyme, mobile domain M654_020250 PF17933 Tetracyclin repressor-like, C-terminal domain M654_020250 PF00440 Bacterial regulatory proteins, tetR family M654_020255 PF14317 YcxB-like protein M654_020265 PF02586 SOS response associated peptidase (SRAP) M654_020275 PF10787 Uncharacterised protein from bacillus cereus group M654_020280 PF03211 Pectate lyase M654_020295 PF00583 Acetyltransferase (GNAT) family M654_020315 PF00251 Glycosyl hydrolases family 32 N-terminal domain M654_020315 PF08244 Glycosyl hydrolases family 32 C terminal M654_020320 PF02435 Levansucrase/Invertase M654_020330 PF12833 Helix-turn-helix domain M654_020330 PF00072 Response regulator receiver domain M654_020335 PF06580 Histidine kinase M654_020335 PF02743 Cache domain M654_020335 PF00672 HAMP domain M654_020335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_020340 PF04198 Putative sugar-binding domain M654_020345 PF03829 PTS system glucitol/sorbitol-specific IIA component M654_020350 PF07663 Sorbitol phosphotransferase enzyme II C-terminus M654_020350 PF03612 Sorbitol phosphotransferase enzyme II N-terminus M654_020355 PF03608 PTS system enzyme II sorbitol-specific factor M654_020370 PF13344 Haloacid dehalogenase-like hydrolase M654_020370 PF00293 NUDIX domain M654_020380 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M654_020385 PF02502 Ribose/Galactose Isomerase M654_020390 PF00455 DeoR C terminal sensor domain M654_020390 PF08220 DeoR-like helix-turn-helix domain M654_020395 PF00121 Triosephosphate isomerase M654_020405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M654_020410 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M654_020415 PF03480 Bacterial extracellular solute-binding protein, family 7 M654_020420 PF01261 Xylose isomerase-like TIM barrel M654_020430 PF00356 Bacterial regulatory proteins, lacI family M654_020435 PF00118 TCP-1/cpn60 chaperonin family M654_020440 PF00166 Chaperonin 10 Kd subunit M654_020445 PF02517 CPBP intramembrane metalloprotease M654_020450 PF14146 Domain of unknown function (DUF4305) M654_020460 PF02416 mttA/Hcf106 family M654_020465 PF06971 Putative DNA-binding protein N-terminus M654_020465 PF02629 CoA binding domain M654_020470 PF01967 MoaC family M654_020475 PF16326 ABC transporter C-terminal domain M654_020475 PF12848 ABC transporter M654_020475 PF00005 ABC transporter M654_020480 PF00814 Glycoprotease family M654_020485 PF00583 Acetyltransferase (GNAT) family M654_020490 PF00814 Glycoprotease family M654_020495 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M654_020500 PF02769 AIR synthase related protein, C-terminal domain M654_020500 PF00586 AIR synthase related protein, N-terminal domain M654_020550 PF04203 Sortase domain M654_020555 PF17961 Bacterial Ig domain M654_020555 PF04650 YSIRK type signal peptide M654_020555 PF10425 C-terminus of bacterial fibrinogen-binding adhesin M654_020555 PF17210 SdrD B-like domain M654_020555 PF00746 LPXTG cell wall anchor motif M654_020560 PF00072 Response regulator receiver domain M654_020560 PF04397 LytTr DNA-binding domain M654_020565 PF06580 Histidine kinase M654_020565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_020570 PF07690 Major Facilitator Superfamily M654_020575 PF04820 Tryptophan halogenase M654_020585 PF00290 Tryptophan synthase alpha chain M654_020590 PF00291 Pyridoxal-phosphate dependent enzyme M654_020595 PF04198 Putative sugar-binding domain M654_020600 PF01757 Acyltransferase family M654_020625 PF13977 BetI-type transcriptional repressor, C-terminal M654_020625 PF00440 Bacterial regulatory proteins, tetR family M654_020630 PF08859 DGC domain M654_020640 PF00324 Amino acid permease M654_020645 PF04199 Putative cyclase M654_020660 PF03466 LysR substrate binding domain M654_020660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_020665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M654_020670 PF06445 GyrI-like small molecule binding domain M654_020670 PF13411 MerR HTH family regulatory protein M654_020675 PF07690 Major Facilitator Superfamily M654_020685 PF08818 Domain of unknown function (DU1801) M654_020690 PF01022 Bacterial regulatory protein, arsR family M654_020695 PF04299 Putative FMN-binding domain M654_020700 PF00583 Acetyltransferase (GNAT) family M654_020705 PF01047 MarR family M654_020715 PF00457 Glycosyl hydrolases family 11 M654_020760 PF10263 SprT-like family M654_020770 PF17674 HHH domain M654_020770 PF00575 S1 RNA binding domain M654_020770 PF16921 Tex protein YqgF-like domain M654_020770 PF09371 Tex-like protein N-terminal domain M654_020775 PF07228 Stage II sporulation protein E (SpoIIE) M654_020780 PF04542 Sigma-70 region 2 M654_020780 PF04539 Sigma-70 region 3 M654_020780 PF04545 Sigma-70, region 4 M654_020785 PF13581 Histidine kinase-like ATPase domain M654_020790 PF01740 STAS domain M654_020795 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain M654_020795 PF07228 Stage II sporulation protein E (SpoIIE) M654_020800 PF13581 Histidine kinase-like ATPase domain M654_020805 PF01740 STAS domain M654_020810 PF01740 STAS domain M654_020810 PF08678 Rsbr N terminal M654_020815 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system M654_020820 PF01402 Ribbon-helix-helix protein, copG family M654_020825 PF01168 Alanine racemase, N-terminal domain M654_020825 PF00842 Alanine racemase, C-terminal domain M654_020835 PF01694 Rhomboid family M654_020840 PF03703 Bacterial PH domain M654_020845 PF03703 Bacterial PH domain M654_020850 PF00271 Helicase conserved C-terminal domain M654_020850 PF00270 DEAD/DEAH box helicase M654_020855 PF12146 Serine aminopeptidase, S33 M654_020860 PF08245 Mur ligase middle domain M654_020860 PF02875 Mur ligase family, glutamate ligase domain M654_020860 PF01225 Mur ligase family, catalytic domain M654_020865 PF01820 D-ala D-ala ligase N-terminus M654_020865 PF07478 D-ala D-ala ligase C-terminus M654_020870 PF00085 Thioredoxin M654_020880 PF13040 Fur-regulated basic protein B M654_020885 PF02770 Acyl-CoA dehydrogenase, middle domain M654_020885 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M654_020885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M654_020900 PF00005 ABC transporter M654_020905 PF00375 Sodium:dicarboxylate symporter family M654_020910 PF01594 AI-2E family transporter M654_020915 PF00477 Small hydrophilic plant seed protein M654_020915 PF10685 Stress-induced bacterial acidophilic repeat motif M654_020920 PF07883 Cupin domain M654_020930 PF03575 Peptidase family S51 M654_020935 PF12787 EcsC protein family M654_020945 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase M654_020950 PF10415 Fumarase C C-terminus M654_020950 PF00206 Lyase M654_020955 PF04226 Transglycosylase associated protein M654_020960 PF01566 Natural resistance-associated macrophage protein M654_020965 PF13302 Acetyltransferase (GNAT) domain M654_020975 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M654_020975 PF18416 N-acetylglucosamine binding protein domain 2 M654_020980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M654_020980 PF00205 Thiamine pyrophosphate enzyme, central domain M654_020980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M654_020985 PF01751 Toprim domain M654_020985 PF01131 DNA topoisomerase M654_020990 PF01037 Lrp/AsnC ligand binding domain M654_021000 PF12823 Domain of unknown function (DUF3817) M654_021005 PF03816 Cell envelope-related transcriptional attenuator domain M654_021010 PF10997 Alternate to MurJ M654_021015 PF16242 Pyridoxamine 5'-phosphate oxidase like M654_021035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_021035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_021035 PF05043 Mga helix-turn-helix domain M654_021035 PF00874 PRD domain M654_021035 PF08279 HTH domain M654_021040 PF01232 Mannitol dehydrogenase Rossmann domain M654_021040 PF08125 Mannitol dehydrogenase C-terminal domain M654_021045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_021050 PF02378 Phosphotransferase system, EIIC M654_021050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_021055 PF13472 GDSL-like Lipase/Acylhydrolase family M654_021060 PF01614 Bacterial transcriptional regulator M654_021060 PF09339 IclR helix-turn-helix domain M654_021065 PF02626 Carboxyltransferase domain, subdomain A and B M654_021070 PF02682 Carboxyltransferase domain, subdomain C and D M654_021075 PF07286 Protein of unknown function (DUF1445) M654_021080 PF01566 Natural resistance-associated macrophage protein M654_021085 PF03746 LamB/YcsF family M654_021095 PF15493 Domain of unknown function, YrpD M654_021100 PF07977 FabA-like domain M654_021115 PF10026 Predicted Zn-dependent protease (DUF2268) M654_021120 PF13411 MerR HTH family regulatory protein M654_021120 PF07739 TipAS antibiotic-recognition domain M654_021125 PF00939 Sodium:sulfate symporter transmembrane region M654_021130 PF00392 Bacterial regulatory proteins, gntR family M654_021130 PF07729 FCD domain M654_021140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M654_021145 PF00355 Rieske [2Fe-2S] domain M654_021150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M654_021150 PF04324 BFD-like [2Fe-2S] binding domain M654_021150 PF18267 Rubredoxin NAD+ reductase C-terminal domain M654_021150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M654_021150 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_021155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M654_021155 PF00384 Molybdopterin oxidoreductase M654_021155 PF01568 Molydopterin dinucleotide binding domain M654_021160 PF04324 BFD-like [2Fe-2S] binding domain M654_021160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M654_021160 PF07992 Pyridine nucleotide-disulphide oxidoreductase M654_021160 PF18267 Rubredoxin NAD+ reductase C-terminal domain M654_021165 PF05573 NosL M654_021165 PF08220 DeoR-like helix-turn-helix domain M654_021170 PF13115 YtkA-like M654_021170 PF04234 CopC domain M654_021170 PF05425 Copper resistance protein D M654_021175 PF07987 Domain of unkown function (DUF1775) M654_021185 PF00892 EamA-like transporter family M654_021190 PF00106 short chain dehydrogenase M654_021195 PF00171 Aldehyde dehydrogenase family M654_021200 PF13520 Amino acid permease M654_021205 PF00202 Aminotransferase class-III M654_021210 PF00392 Bacterial regulatory proteins, gntR family M654_021210 PF00155 Aminotransferase class I and II M654_021215 PF01022 Bacterial regulatory protein, arsR family M654_021220 PF03992 Antibiotic biosynthesis monooxygenase M654_021225 PF00881 Nitroreductase family M654_021230 PF00440 Bacterial regulatory proteins, tetR family M654_021235 PF07690 Major Facilitator Superfamily M654_021245 PF00722 Glycosyl hydrolases family 16 M654_021255 PF01497 Periplasmic binding protein M654_021260 PF00005 ABC transporter M654_021265 PF01032 FecCD transport family M654_021270 PF01032 FecCD transport family M654_021275 PF00696 Amino acid kinase family M654_021275 PF13840 ACT domain M654_021280 PF05227 CHASE3 domain M654_021280 PF00672 HAMP domain M654_021280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_021285 PF00672 HAMP domain M654_021285 PF00512 His Kinase A (phospho-acceptor) domain M654_021285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_021290 PF00072 Response regulator receiver domain M654_021290 PF00486 Transcriptional regulatory protein, C terminal M654_021295 PF12704 MacB-like periplasmic core domain M654_021295 PF02687 FtsX-like permease family M654_021300 PF00005 ABC transporter M654_021310 PF07739 TipAS antibiotic-recognition domain M654_021310 PF13411 MerR HTH family regulatory protein M654_021315 PF03845 Spore germination protein M654_021320 PF05504 Spore germination B3/ GerAC like, C-terminal M654_021325 PF03323 Bacillus/Clostridium GerA spore germination protein M654_021335 PF12708 Pectate lyase superfamily protein M654_021335 PF13229 Right handed beta helix region M654_021340 PF00854 POT family M654_021350 PF02333 Phytase M654_021355 PF02449 Beta-galactosidase M654_021355 PF08532 Beta-galactosidase trimerisation domain M654_021355 PF08533 Beta-galactosidase C-terminal domain M654_021360 PF00583 Acetyltransferase (GNAT) family M654_021360 PF01047 MarR family M654_021365 PF07690 Major Facilitator Superfamily M654_021370 PF16888 Domain of unknown function (DUF5082) M654_021375 PF02653 Branched-chain amino acid transport system / permease component M654_021380 PF00005 ABC transporter M654_021385 PF13407 Periplasmic binding protein domain M654_021390 PF00196 Bacterial regulatory proteins, luxR family M654_021390 PF00072 Response regulator receiver domain M654_021395 PF00672 HAMP domain M654_021395 PF06580 Histidine kinase M654_021395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_021395 PF02743 Cache domain M654_021475 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M654_021480 PF02441 Flavoprotein M654_021485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_021485 PF03466 LysR substrate binding domain M654_021490 PF00491 Arginase family M654_021495 PF00324 Amino acid permease M654_021500 PF00202 Aminotransferase class-III M654_021505 PF13426 PAS domain M654_021505 PF00158 Sigma-54 interaction domain M654_021505 PF02954 Bacterial regulatory protein, Fis family M654_021510 PF00497 Bacterial extracellular solute-binding proteins, family 3 M654_021515 PF00528 Binding-protein-dependent transport system inner membrane component M654_021520 PF00005 ABC transporter M654_021530 PF00440 Bacterial regulatory proteins, tetR family M654_021530 PF16295 Tetracyclin repressor-like, C-terminal domain M654_021550 PF02743 Cache domain M654_021550 PF00672 HAMP domain M654_021550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_021565 PF03466 LysR substrate binding domain M654_021565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_021580 PF06445 GyrI-like small molecule binding domain M654_021580 PF12833 Helix-turn-helix domain M654_021585 PF00756 Putative esterase M654_021590 PF01648 4'-phosphopantetheinyl transferase superfamily M654_021595 PF00155 Aminotransferase class I and II M654_021595 PF00392 Bacterial regulatory proteins, gntR family M654_021600 PF00892 EamA-like transporter family M654_021605 PF00975 Thioesterase domain M654_021610 PF00668 Condensation domain M654_021610 PF13193 AMP-binding enzyme C-terminal domain M654_021610 PF00550 Phosphopantetheine attachment site M654_021610 PF00501 AMP-binding enzyme M654_021610 PF00975 Thioesterase domain M654_021615 PF13193 AMP-binding enzyme C-terminal domain M654_021615 PF00668 Condensation domain M654_021615 PF00550 Phosphopantetheine attachment site M654_021615 PF00501 AMP-binding enzyme M654_021620 PF00501 AMP-binding enzyme M654_021620 PF13193 AMP-binding enzyme C-terminal domain M654_021620 PF00668 Condensation domain M654_021620 PF00550 Phosphopantetheine attachment site M654_021625 PF07690 Major Facilitator Superfamily M654_021635 PF00528 Binding-protein-dependent transport system inner membrane component M654_021640 PF00528 Binding-protein-dependent transport system inner membrane component M654_021645 PF00005 ABC transporter M654_021645 PF08402 TOBE domain M654_021655 PF02538 Hydantoinase B/oxoprolinase M654_021660 PF01968 Hydantoinase/oxoprolinase M654_021660 PF05378 Hydantoinase/oxoprolinase N-terminal region M654_021665 PF14449 Pre-toxin TG M654_021665 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues M654_021665 PF04740 LXG domain of WXG superfamily M654_021675 PF17202 Single cache domain 3 M654_021675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_021675 PF00672 HAMP domain M654_021680 PF01494 FAD binding domain M654_021685 PF00211 Adenylate and Guanylate cyclase catalytic domain M654_021685 PF00069 Protein kinase domain M654_021690 PF00232 Glycosyl hydrolase family 1 M654_021700 PF02525 Flavodoxin-like fold M654_021705 PF00497 Bacterial extracellular solute-binding proteins, family 3 M654_021710 PF00528 Binding-protein-dependent transport system inner membrane component M654_021725 PF05448 Acetyl xylan esterase (AXE1) M654_021730 PF03773 Predicted permease M654_021735 PF09323 Domain of unknown function (DUF1980) M654_021740 PF17853 GGDEF-like domain M654_021740 PF13556 PucR C-terminal helix-turn-helix domain M654_021745 PF00474 Sodium:solute symporter family M654_021750 PF00171 Aldehyde dehydrogenase family M654_021755 PF01619 Proline dehydrogenase M654_021760 PF10127 RNA repair pathway DNA polymerase beta family M654_021765 PF00132 Bacterial transferase hexapeptide (six repeats) M654_021770 PF01202 Shikimate kinase M654_021775 PF02540 NAD synthase M654_021780 PF00324 Amino acid permease M654_021785 PF01810 LysE type translocator M654_021790 PF02652 L-lactate permease M654_021795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M654_021795 PF00056 lactate/malate dehydrogenase, NAD binding domain M654_021800 PF07690 Major Facilitator Superfamily M654_021805 PF07690 Major Facilitator Superfamily M654_021810 PF02683 Cytochrome C biogenesis protein transmembrane region M654_021815 PF05816 Toxic anion resistance protein (TelA) M654_021820 PF14266 Putative component of 'biosynthetic module' M654_021835 PF11202 Phosphoribosyl transferase (PRTase) M654_021835 PF15608 PELOTA RNA binding domain M654_021850 PF03741 Integral membrane protein TerC family M654_021855 PF02342 TerD domain M654_021860 PF02342 TerD domain M654_021865 PF02342 TerD domain M654_021890 PF00005 ABC transporter M654_021890 PF13732 Domain of unknown function (DUF4162) M654_021900 PF00877 NlpC/P60 family M654_021905 PF00296 Luciferase-like monooxygenase M654_021910 PF07486 Cell Wall Hydrolase M654_021915 PF00581 Rhodanese-like domain M654_021920 PF16244 Domain of unknown function (DUF4901) M654_021925 PF00089 Trypsin M654_021930 PF06483 Chitinase C M654_021930 PF00704 Glycosyl hydrolases family 18 M654_021935 PF00704 Glycosyl hydrolases family 18 M654_021935 PF00041 Fibronectin type III domain M654_021940 PF04794 YdjC-like protein M654_021945 PF07702 UTRA domain M654_021945 PF00392 Bacterial regulatory proteins, gntR family M654_021950 PF02056 Family 4 glycosyl hydrolase M654_021950 PF11975 Family 4 glycosyl hydrolase C-terminal domain M654_021955 PF02378 Phosphotransferase system, EIIC M654_021960 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M654_021965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_021970 PF02913 FAD linked oxidases, C-terminal domain M654_021970 PF01565 FAD binding domain M654_021975 PF13183 4Fe-4S dicluster domain M654_021975 PF02754 Cysteine-rich domain M654_021980 PF00144 Beta-lactamase M654_021985 PF04226 Transglycosylase associated protein M654_021990 PF01432 Peptidase family M3 M654_021990 PF08439 Oligopeptidase F M654_021995 PF01425 Amidase M654_022000 PF00583 Acetyltransferase (GNAT) family M654_022005 PF00710 Asparaginase, N-terminal M654_022005 PF17763 Glutaminase/Asparaginase C-terminal domain M654_022020 PF01546 Peptidase family M20/M25/M40 M654_022020 PF07687 Peptidase dimerisation domain M654_022025 PF03606 C4-dicarboxylate anaerobic carrier M654_022030 PF17118 Domain of unknown function (DUF5105) M654_022030 PF11611 Domain of unknown function (DUF4352) M654_022035 PF13649 Methyltransferase domain M654_022055 PF14552 Tautomerase enzyme M654_022060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_022060 PF03466 LysR substrate binding domain M654_022065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_022065 PF00512 His Kinase A (phospho-acceptor) domain M654_022070 PF00072 Response regulator receiver domain M654_022070 PF00486 Transcriptional regulatory protein, C terminal M654_022085 PF00005 ABC transporter M654_022090 PF00669 Bacterial flagellin N-terminal helical region M654_022090 PF00700 Bacterial flagellin C-terminal helical region M654_022095 PF05225 helix-turn-helix, Psq domain M654_022095 PF02810 SEC-C motif M654_022105 PF00892 EamA-like transporter family M654_022120 PF07739 TipAS antibiotic-recognition domain M654_022120 PF13411 MerR HTH family regulatory protein M654_022145 PF00501 AMP-binding enzyme M654_022145 PF13193 AMP-binding enzyme C-terminal domain M654_022150 PF01047 MarR family M654_022155 PF01636 Phosphotransferase enzyme family M654_022190 PF01420 Type I restriction modification DNA specificity domain M654_022195 PF13037 Domain of unknown function (DUF3898) M654_022195 PF13039 Protein of unknown function (DUF3900) M654_022220 PF00005 ABC transporter M654_022225 PF00512 His Kinase A (phospho-acceptor) domain M654_022225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_022230 PF00072 Response regulator receiver domain M654_022230 PF00486 Transcriptional regulatory protein, C terminal M654_022235 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M654_022235 PF08666 SAF domain M654_022240 PF00392 Bacterial regulatory proteins, gntR family M654_022240 PF07729 FCD domain M654_022245 PF13378 Enolase C-terminal domain-like M654_022250 PF07690 Major Facilitator Superfamily M654_022255 PF00171 Aldehyde dehydrogenase family M654_022260 PF00701 Dihydrodipicolinate synthetase family M654_022265 PF00902 Sec-independent protein translocase protein (TatC) M654_022270 PF02416 mttA/Hcf106 family M654_022275 PF09423 PhoD-like phosphatase M654_022275 PF16655 PhoD-like phosphatase, N-terminal domain M654_022285 PF03965 Penicillinase repressor M654_022290 PF05569 BlaR1 peptidase M56 M654_022290 PF00905 Penicillin binding protein transpeptidase domain M654_022295 PF13302 Acetyltransferase (GNAT) domain M654_022300 PF08664 YcbB domain M654_022300 PF00072 Response regulator receiver domain M654_022305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_022310 PF04960 Glutaminase M654_022315 PF01235 Sodium:alanine symporter family M654_022320 PF10138 vWA found in TerF C terminus M654_022325 PF10990 Protein of unknown function (DUF2809) M654_022335 PF04239 Protein of unknown function (DUF421) M654_022350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M654_022350 PF00367 phosphotransferase system, EIIB M654_022350 PF02378 Phosphotransferase system, EIIC M654_022355 PF04794 YdjC-like protein M654_022360 PF02574 Homocysteine S-methyltransferase M654_022365 PF00324 Amino acid permease M654_022385 PF13407 Periplasmic binding protein domain M654_022390 PF12729 Four helix bundle sensory module for signal transduction M654_022390 PF00672 HAMP domain M654_022390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M654_022395 PF00465 Iron-containing alcohol dehydrogenase M654_022430 PF02311 AraC-like ligand binding domain M654_022430 PF12833 Helix-turn-helix domain M654_022435 PF00892 EamA-like transporter family M654_022445 PF08924 Domain of unknown function (DUF1906) M654_022445 PF01471 Putative peptidoglycan binding domain M654_022465 PF05360 yiaA/B two helix domain M654_022470 PF02690 Na+/Pi-cotransporter M654_022485 PF03176 MMPL family M654_022490 PF01047 MarR family M654_022500 PF01925 Sulfite exporter TauE/SafE M654_022505 PF07729 FCD domain M654_022505 PF00392 Bacterial regulatory proteins, gntR family M654_022510 PF00881 Nitroreductase family M654_022515 PF00282 Pyridoxal-dependent decarboxylase conserved domain M654_022520 PF08241 Methyltransferase domain M654_022525 PF01596 O-methyltransferase M654_022540 PF18277 AbrB C-terminal domain M654_022540 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M654_022550 PF04203 Sortase domain M654_022560 PF01520 N-acetylmuramoyl-L-alanine amidase M654_022560 PF08239 Bacterial SH3 domain M654_022565 PF01476 LysM domain M654_022565 PF00877 NlpC/P60 family M654_022585 PF00753 Metallo-beta-lactamase superfamily M654_022590 PF01638 HxlR-like helix-turn-helix M654_022595 PF07883 Cupin domain M654_022600 PF01925 Sulfite exporter TauE/SafE M654_022605 PF01206 Sulfurtransferase TusA M654_022610 PF00581 Rhodanese-like domain M654_022610 PF00753 Metallo-beta-lactamase superfamily M654_022625 PF13686 DsrE/DsrF/DrsH-like family M654_022630 PF02583 Metal-sensitive transcriptional repressor M654_022640 PF03190 Protein of unknown function, DUF255 M654_022650 PF00004 ATPase family associated with various cellular activities (AAA) M654_022650 PF07724 AAA domain (Cdc48 subfamily) M654_022650 PF17871 AAA lid domain M654_022650 PF02861 Clp amino terminal domain, pathogenicity island component M654_022650 PF10431 C-terminal, D2-small domain, of ClpB protein M654_022660 PF03190 Protein of unknown function, DUF255 M654_022675 PF17340 Family of unknown function (DUF5370) M654_022680 PF17334 Minor curli fiber component A M654_022685 PF07690 Major Facilitator Superfamily M654_022695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M654_022695 PF03466 LysR substrate binding domain M654_022700 PF07690 Major Facilitator Superfamily M654_022705 PF02378 Phosphotransferase system, EIIC M654_022705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_022705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_022710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M654_022710 PF00874 PRD domain M654_022710 PF05043 Mga helix-turn-helix domain M654_022710 PF08279 HTH domain M654_022710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M654_022715 PF08240 Alcohol dehydrogenase GroES-like domain M654_022715 PF00107 Zinc-binding dehydrogenase M654_022730 PF00324 Amino acid permease M654_022735 PF13419 Haloacid dehalogenase-like hydrolase M654_022740 PF00805 Pentapeptide repeats (8 copies) M654_022745 PF01177 Asp/Glu/Hydantoin racemase M654_022750 PF03595 Voltage-dependent anion channel M654_022760 PF01323 DSBA-like thioredoxin domain M654_022765 PF00005 ABC transporter M654_022765 PF00664 ABC transporter transmembrane region M654_022770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M654_022770 PF00512 His Kinase A (phospho-acceptor) domain M654_022775 PF00072 Response regulator receiver domain M654_022775 PF00486 Transcriptional regulatory protein, C terminal M654_022790 PF00005 ABC transporter M654_022800 PF07690 Major Facilitator Superfamily M654_022815 PF01638 HxlR-like helix-turn-helix M654_022820 PF02525 Flavodoxin-like fold M654_022835 PF01380 SIS domain M654_022840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M654_022840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M654_022840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M654_022840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M654_022845 PF07949 YbbR-like protein M654_022850 PF02457 DisA bacterial checkpoint controller nucleotide-binding M654_022855 PF13490 Putative zinc-finger M654_022860 PF08281 Sigma-70, region 4 M654_022860 PF04542 Sigma-70 region 2 M654_022865 PF00491 Arginase family M654_022895 PF04463 Protein of unknown function (DUF523) M654_022900 PF01380 SIS domain M654_022905 PF01418 Helix-turn-helix domain, rpiR family M654_022905 PF01380 SIS domain M654_022910 PF02378 Phosphotransferase system, EIIC M654_022910 PF00367 phosphotransferase system, EIIB M654_022915 PF00144 Beta-lactamase M654_022920 PF01915 Glycosyl hydrolase family 3 C-terminal domain M654_022920 PF00933 Glycosyl hydrolase family 3 N terminal domain M654_022925 PF07075 Protein of unknown function (DUF1343) M654_022930 PF02567 Phenazine biosynthesis-like protein M654_022935 PF17369 Family of unknown function (DUF5391) M654_022940 PF01758 Sodium Bile acid symporter family M654_022950 PF00144 Beta-lactamase M654_022995 PF01522 Polysaccharide deacetylase M654_023000 PF14089 KinB-signalling pathway activation in sporulation M654_023005 PF17898 Spore germination GerD central core domain M654_023010 PF10609 NUBPL iron-transfer P-loop NTPase M654_023015 PF01520 N-acetylmuramoyl-L-alanine amidase M654_023020 PF10730 Protein of unknown function (DUF2521) M654_023025 PF05163 DinB family M654_023030 PF00380 Ribosomal protein S9/S16 M654_023035 PF00572 Ribosomal protein L13 M654_023040 PF01416 tRNA pseudouridine synthase M654_023045 PF02361 Cobalt transport protein M654_023050 PF00005 ABC transporter M654_023055 PF00005 ABC transporter M654_023060 PF01196 Ribosomal protein L17 M654_023065 PF01000 RNA polymerase Rpb3/RpoA insert domain M654_023065 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M654_023065 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M654_023070 PF00411 Ribosomal protein S11 M654_023075 PF00416 Ribosomal protein S13/S18 M654_023080 PF00444 Ribosomal protein L36 M654_023085 PF01176 Translation initiation factor 1A / IF-1 M654_023095 PF00557 Metallopeptidase family M24 M654_023100 PF05191 Adenylate kinase, active site lid M654_023105 PF00344 SecY translocase M654_023110 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M654_023115 PF00327 Ribosomal protein L30p/L7e M654_023120 PF03719 Ribosomal protein S5, C-terminal domain M654_023120 PF00333 Ribosomal protein S5, N-terminal domain M654_023125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M654_023130 PF00347 Ribosomal protein L6 M654_023135 PF00410 Ribosomal protein S8 M654_023140 PF00253 Ribosomal protein S14p/S29e M654_023145 PF00673 ribosomal L5P family C-terminus M654_023145 PF00281 Ribosomal protein L5 M654_023150 PF00467 KOW motif M654_023150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M654_023155 PF00238 Ribosomal protein L14p/L23e M654_023160 PF00366 Ribosomal protein S17 M654_023165 PF00831 Ribosomal L29 protein M654_023170 PF00252 Ribosomal protein L16p/L10e M654_023175 PF00189 Ribosomal protein S3, C-terminal domain M654_023175 PF07650 KH domain M654_023180 PF00237 Ribosomal protein L22p/L17e M654_023185 PF00203 Ribosomal protein S19 M654_023190 PF03947 Ribosomal Proteins L2, C-terminal domain M654_023190 PF00181 Ribosomal Proteins L2, RNA binding domain M654_023195 PF00276 Ribosomal protein L23 M654_023200 PF00573 Ribosomal protein L4/L1 family M654_023205 PF00297 Ribosomal protein L3 M654_023210 PF00338 Ribosomal protein S10p/S20e M654_023215 PF03143 Elongation factor Tu C-terminal domain M654_023215 PF03144 Elongation factor Tu domain 2 M654_023215 PF00009 Elongation factor Tu GTP binding domain M654_023220 PF00009 Elongation factor Tu GTP binding domain M654_023220 PF03144 Elongation factor Tu domain 2 M654_023220 PF03764 Elongation factor G, domain IV M654_023220 PF14492 Elongation Factor G, domain II M654_023220 PF00679 Elongation factor G C-terminus M654_023225 PF00177 Ribosomal protein S7p/S5e M654_023230 PF00164 Ribosomal protein S12/S23 M654_023235 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M654_023240 PF04998 RNA polymerase Rpb1, domain 5 M654_023240 PF05000 RNA polymerase Rpb1, domain 4 M654_023240 PF04997 RNA polymerase Rpb1, domain 1 M654_023240 PF00623 RNA polymerase Rpb1, domain 2 M654_023240 PF04983 RNA polymerase Rpb1, domain 3 M654_023245 PF00562 RNA polymerase Rpb2, domain 6 M654_023245 PF10385 RNA polymerase beta subunit external 1 domain M654_023245 PF04561 RNA polymerase Rpb2, domain 2 M654_023245 PF04563 RNA polymerase beta subunit M654_023245 PF04560 RNA polymerase Rpb2, domain 7 M654_023245 PF04565 RNA polymerase Rpb2, domain 3 M654_023250 PF05175 Methyltransferase small domain M654_023255 PF16320 Ribosomal protein L7/L12 dimerisation domain M654_023255 PF00542 Ribosomal protein L7/L12 C-terminal domain M654_023260 PF00466 Ribosomal protein L10 M654_023265 PF00687 Ribosomal protein L1p/L10e family M654_023270 PF00298 Ribosomal protein L11, RNA binding domain M654_023270 PF03946 Ribosomal protein L11, N-terminal domain M654_023275 PF02357 Transcription termination factor nusG M654_023275 PF00467 KOW motif M654_023280 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M654_023285 PF00471 Ribosomal protein L33 M654_023290 PF08281 Sigma-70, region 4 M654_023290 PF04542 Sigma-70 region 2 M654_023295 PF05991 YacP-like NYN domain M654_023300 PF08032 RNA 2'-O ribose methyltransferase substrate binding M654_023300 PF00588 SpoU rRNA Methylase family M654_023305 PF00636 Ribonuclease III domain M654_023310 PF01406 tRNA synthetases class I (C) catalytic domain M654_023310 PF09190 DALR domain M654_023315 PF00132 Bacterial transferase hexapeptide (six repeats) M654_023320 PF00749 tRNA synthetases class I (E and Q), catalytic domain M654_023325 PF02542 YgbB family M654_023330 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M654_023340 PF10635 DisA bacterial checkpoint controller linker region M654_023340 PF02457 DisA bacterial checkpoint controller nucleotide-binding M654_023345 PF18073 Rubredoxin metal binding domain M654_023350 PF17871 AAA lid domain M654_023350 PF00004 ATPase family associated with various cellular activities (AAA) M654_023350 PF07724 AAA domain (Cdc48 subfamily) M654_023350 PF02861 Clp amino terminal domain, pathogenicity island component M654_023350 PF10431 C-terminal, D2-small domain, of ClpB protein M654_023355 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain M654_023360 PF02151 UvrB/uvrC motif M654_023365 PF05848 CtsR N-terminal HTH domain M654_023365 PF17727 CtsR C-terminal dimerization domain