locus-tag class description M662_00010 PF01368 DHH family M662_00010 PF02272 DHHA1 domain M662_00015 PF09991 Predicted membrane protein (DUF2232) M662_00030 PF03806 AbgT putative transporter family M662_00035 PF01842 ACT domain M662_00035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M662_00035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M662_00040 PF00266 Aminotransferase class-V M662_00045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M662_00050 PF00970 Oxidoreductase FAD-binding domain M662_00050 PF00042 Globin M662_00050 PF00175 Oxidoreductase NAD-binding domain M662_00055 PF02082 Transcriptional regulator M662_00060 PF01084 Ribosomal protein S18 M662_00065 PF00436 Single-strand binding protein family M662_00070 PF01250 Ribosomal protein S6 M662_00075 PF01926 50S ribosome-binding GTPase M662_00075 PF06071 Protein of unknown function (DUF933) M662_00080 PF06107 Bacterial protein of unknown function (DUF951) M662_00085 PF00924 Mechanosensitive ion channel M662_00095 PF06866 Protein of unknown function (DUF1256) M662_00105 PF02195 ParB-like nuclease domain M662_00105 PF17762 HTH domain found in ParB protein M662_00110 PF13614 AAA domain M662_00115 PF17762 HTH domain found in ParB protein M662_00115 PF02195 ParB-like nuclease domain M662_00120 PF00072 Response regulator receiver domain M662_00120 PF00196 Bacterial regulatory proteins, luxR family M662_00125 PF07730 Histidine kinase M662_00125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_00135 PF00005 ABC transporter M662_00155 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M662_00155 PF06827 Zinc finger found in FPG and IleRS M662_00155 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M662_00165 PF02527 rRNA small subunit methyltransferase G M662_00170 PF13932 GidA associated domain M662_00170 PF01134 Glucose inhibited division protein A M662_00175 PF12631 MnmE helical domain M662_00175 PF10396 GTP-binding protein TrmE N-terminus M662_00175 PF01926 50S ribosome-binding GTPase M662_00180 PF01424 R3H domain M662_00180 PF14804 Jag N-terminus M662_00185 PF02096 60Kd inner membrane protein M662_00190 PF00825 Ribonuclease P M662_00195 PF00468 Ribosomal protein L34 M662_00200 PF00308 Bacterial dnaA protein M662_00200 PF11638 DnaA N-terminal domain M662_00200 PF08299 Bacterial dnaA protein helix-turn-helix M662_00205 PF02767 DNA polymerase III beta subunit, central domain M662_00205 PF02768 DNA polymerase III beta subunit, C-terminal domain M662_00205 PF00712 DNA polymerase III beta subunit, N-terminal domain M662_00215 PF02463 RecF/RecN/SMC N terminal domain M662_00220 PF04025 Domain of unknown function (DUF370) M662_00225 PF00986 DNA gyrase B subunit, carboxyl terminus M662_00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_00225 PF01751 Toprim domain M662_00225 PF00204 DNA gyrase B M662_00230 PF03989 DNA gyrase C-terminal domain, beta-propeller M662_00230 PF00521 DNA gyrase/topoisomerase IV, subunit A M662_00235 PF00072 Response regulator receiver domain M662_00240 PF14175 YaaC-like Protein M662_00245 PF00478 IMP dehydrogenase / GMP reductase domain M662_00245 PF00571 CBS domain M662_00250 PF00768 D-alanyl-D-alanine carboxypeptidase M662_00250 PF07943 Penicillin-binding protein 5, C-terminal domain M662_00255 PF01680 SOR/SNZ family M662_00260 PF01174 SNO glutamine amidotransferase family M662_00265 PF02403 Seryl-tRNA synthetase N-terminal domain M662_00265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M662_00275 PF01638 HxlR-like helix-turn-helix M662_00280 PF07690 Major Facilitator Superfamily M662_00290 PF00293 NUDIX domain M662_00295 PF01712 Deoxynucleoside kinase M662_00300 PF01712 Deoxynucleoside kinase M662_00310 PF00528 Binding-protein-dependent transport system inner membrane component M662_00335 PF00171 Aldehyde dehydrogenase family M662_00340 PF14489 QueF-like protein M662_00345 PF00501 AMP-binding enzyme M662_00345 PF13193 AMP-binding enzyme C-terminal domain M662_00350 PF00860 Permease family M662_00355 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M662_00360 PF01965 DJ-1/PfpI family M662_00370 PF01476 LysM domain M662_00370 PF00704 Glycosyl hydrolases family 18 M662_00375 PF14437 MafB19-like deaminase M662_00385 PF12169 DNA polymerase III subunits gamma and tau domain III M662_00390 PF02575 YbaB/EbfC DNA-binding family M662_00395 PF13662 Toprim domain M662_00395 PF02132 RecR protein M662_00430 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M662_00430 PF01276 Orn/Lys/Arg decarboxylase, major domain M662_00435 PF02223 Thymidylate kinase M662_00440 PF06153 Cyclic-di-AMP receptor M662_00445 PF03885 Protein of unknown function (DUF327) M662_00450 PF09115 DNA polymerase III, delta subunit, C terminal M662_00455 PF04468 PSP1 C-terminal conserved region M662_00460 PF06156 Initiation control protein YabA M662_00465 PF05175 Methyltransferase small domain M662_00470 PF01541 GIY-YIG catalytic domain M662_00475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M662_00480 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M662_00480 PF18277 AbrB C-terminal domain M662_00485 PF08264 Anticodon-binding domain of tRNA M662_00485 PF09334 tRNA synthetases class I (M) M662_00485 PF01588 Putative tRNA binding domain M662_00490 PF01026 TatD related DNase M662_00495 PF07501 G5 domain M662_00495 PF03990 G5-linked-Ubiquitin-like domain M662_00495 PF06725 3D domain M662_00500 PF13331 Domain of unknown function (DUF4093) M662_00500 PF13662 Toprim domain M662_00505 PF00398 Ribosomal RNA adenine dimethylase M662_00510 PF05582 YabG peptidase U57 M662_00515 PF06257 Biofilm formation stimulator VEG M662_00520 PF00269 Small, acid-soluble spore proteins, alpha/beta type M662_00525 PF08544 GHMP kinases C terminal M662_00525 PF00288 GHMP kinases N terminal domain M662_00530 PF00156 Phosphoribosyl transferase domain M662_00530 PF09182 Bacterial purine repressor, N-terminal M662_00535 PF04026 SpoVG M662_00540 PF14602 Hexapeptide repeat of succinyl-transferase M662_00540 PF00132 Bacterial transferase hexapeptide (six repeats) M662_00540 PF00483 Nucleotidyl transferase M662_00545 PF14572 Phosphoribosyl synthetase-associated domain M662_00545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M662_00550 PF14693 Ribosomal protein TL5, C-terminal domain M662_00550 PF01386 Ribosomal L25p family M662_00555 PF01195 Peptidyl-tRNA hydrolase M662_00565 PF00271 Helicase conserved C-terminal domain M662_00565 PF03461 TRCF domain M662_00565 PF02559 CarD-like/TRCF domain M662_00565 PF17757 UvrB interaction domain M662_00565 PF00270 DEAD/DEAH box helicase M662_00570 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M662_00570 PF15714 Stage V sporulation protein T C-terminal, transcription factor M662_00575 PF14667 Polysaccharide biosynthesis C-terminal domain M662_00575 PF01943 Polysaccharide biosynthesis protein M662_00580 PF03819 MazG nucleotide pyrophosphohydrolase domain M662_00580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M662_00585 PF01479 S4 domain M662_00590 PF07873 YabP family M662_00605 PF00575 S1 RNA binding domain M662_00620 PF07228 Stage II sporulation protein E (SpoIIE) M662_00625 PF00092 von Willebrand factor type A domain M662_00630 PF00069 Protein kinase domain M662_00635 PF09179 TilS substrate binding domain M662_00635 PF11734 TilS substrate C-terminal domain M662_00635 PF01171 PP-loop family M662_00640 PF11734 TilS substrate C-terminal domain M662_00640 PF00156 Phosphoribosyl transferase domain M662_00640 PF01171 PP-loop family M662_00645 PF00004 ATPase family associated with various cellular activities (AAA) M662_00645 PF01434 Peptidase family M41 M662_00645 PF17862 AAA+ lid domain M662_00645 PF06480 FtsH Extracellular M662_00650 PF03309 Type III pantothenate kinase M662_00655 PF01430 Hsp33 protein M662_00660 PF00291 Pyridoxal-phosphate dependent enzyme M662_00665 PF00809 Pterin binding enzyme M662_00670 PF02152 Dihydroneopterin aldolase M662_00675 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M662_00680 PF00152 tRNA synthetases class II (D, K and N) M662_00680 PF01336 OB-fold nucleic acid binding domain M662_00760 PF02308 MgtC family M662_00765 PF17727 CtsR C-terminal dimerization domain M662_00765 PF05848 CtsR N-terminal HTH domain M662_00770 PF02151 UvrB/uvrC motif M662_00775 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain M662_00780 PF07724 AAA domain (Cdc48 subfamily) M662_00780 PF00004 ATPase family associated with various cellular activities (AAA) M662_00780 PF17871 AAA lid domain M662_00780 PF02861 Clp amino terminal domain, pathogenicity island component M662_00780 PF10431 C-terminal, D2-small domain, of ClpB protein M662_00785 PF18073 Rubredoxin metal binding domain M662_00790 PF10635 DisA bacterial checkpoint controller linker region M662_00790 PF02457 DisA bacterial checkpoint controller nucleotide-binding M662_00800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M662_00800 PF02542 YgbB family M662_00805 PF00749 tRNA synthetases class I (E and Q), catalytic domain M662_00810 PF06426 Serine acetyltransferase, N-terminal M662_00810 PF00132 Bacterial transferase hexapeptide (six repeats) M662_00815 PF01406 tRNA synthetases class I (C) catalytic domain M662_00815 PF09190 DALR domain M662_00820 PF00636 Ribonuclease III domain M662_00825 PF08032 RNA 2'-O ribose methyltransferase substrate binding M662_00825 PF00588 SpoU rRNA Methylase family M662_00830 PF05991 YacP-like NYN domain M662_00835 PF08281 Sigma-70, region 4 M662_00835 PF04542 Sigma-70 region 2 M662_00840 PF00471 Ribosomal protein L33 M662_00845 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M662_00850 PF00467 KOW motif M662_00850 PF02357 Transcription termination factor nusG M662_00855 PF03946 Ribosomal protein L11, N-terminal domain M662_00855 PF00298 Ribosomal protein L11, RNA binding domain M662_00860 PF00687 Ribosomal protein L1p/L10e family M662_00865 PF00466 Ribosomal protein L10 M662_00870 PF16320 Ribosomal protein L7/L12 dimerisation domain M662_00870 PF00542 Ribosomal protein L7/L12 C-terminal domain M662_00875 PF05175 Methyltransferase small domain M662_00880 PF04563 RNA polymerase beta subunit M662_00880 PF04561 RNA polymerase Rpb2, domain 2 M662_00880 PF04560 RNA polymerase Rpb2, domain 7 M662_00880 PF04565 RNA polymerase Rpb2, domain 3 M662_00880 PF10385 RNA polymerase beta subunit external 1 domain M662_00880 PF00562 RNA polymerase Rpb2, domain 6 M662_00885 PF04997 RNA polymerase Rpb1, domain 1 M662_00885 PF00623 RNA polymerase Rpb1, domain 2 M662_00885 PF04998 RNA polymerase Rpb1, domain 5 M662_00885 PF05000 RNA polymerase Rpb1, domain 4 M662_00885 PF04983 RNA polymerase Rpb1, domain 3 M662_00890 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M662_00895 PF00164 Ribosomal protein S12/S23 M662_00900 PF00177 Ribosomal protein S7p/S5e M662_00905 PF14492 Elongation Factor G, domain II M662_00905 PF00009 Elongation factor Tu GTP binding domain M662_00905 PF03764 Elongation factor G, domain IV M662_00905 PF00679 Elongation factor G C-terminus M662_00905 PF03144 Elongation factor Tu domain 2 M662_00910 PF00009 Elongation factor Tu GTP binding domain M662_00910 PF03143 Elongation factor Tu C-terminal domain M662_00910 PF03144 Elongation factor Tu domain 2 M662_00915 PF00338 Ribosomal protein S10p/S20e M662_00920 PF00297 Ribosomal protein L3 M662_00925 PF00573 Ribosomal protein L4/L1 family M662_00930 PF00276 Ribosomal protein L23 M662_00935 PF03947 Ribosomal Proteins L2, C-terminal domain M662_00935 PF00181 Ribosomal Proteins L2, RNA binding domain M662_00940 PF00203 Ribosomal protein S19 M662_00945 PF00237 Ribosomal protein L22p/L17e M662_00950 PF07650 KH domain M662_00950 PF00189 Ribosomal protein S3, C-terminal domain M662_00955 PF00252 Ribosomal protein L16p/L10e M662_00960 PF00831 Ribosomal L29 protein M662_00965 PF00366 Ribosomal protein S17 M662_00970 PF00238 Ribosomal protein L14p/L23e M662_00975 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M662_00975 PF00467 KOW motif M662_00980 PF00281 Ribosomal protein L5 M662_00980 PF00673 ribosomal L5P family C-terminus M662_00985 PF00253 Ribosomal protein S14p/S29e M662_00990 PF00410 Ribosomal protein S8 M662_00995 PF00347 Ribosomal protein L6 M662_01000 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M662_01005 PF03719 Ribosomal protein S5, C-terminal domain M662_01005 PF00333 Ribosomal protein S5, N-terminal domain M662_01010 PF00327 Ribosomal protein L30p/L7e M662_01015 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M662_01020 PF00344 SecY translocase M662_01025 PF05191 Adenylate kinase, active site lid M662_01030 PF00557 Metallopeptidase family M24 M662_01040 PF01176 Translation initiation factor 1A / IF-1 M662_01045 PF00444 Ribosomal protein L36 M662_01050 PF00416 Ribosomal protein S13/S18 M662_01055 PF00411 Ribosomal protein S11 M662_01060 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M662_01060 PF01000 RNA polymerase Rpb3/RpoA insert domain M662_01060 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M662_01065 PF01196 Ribosomal protein L17 M662_01070 PF00005 ABC transporter M662_01075 PF00005 ABC transporter M662_01080 PF02361 Cobalt transport protein M662_01085 PF01416 tRNA pseudouridine synthase M662_01090 PF00572 Ribosomal protein L13 M662_01095 PF00380 Ribosomal protein S9/S16 M662_01100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M662_01110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M662_01115 PF03611 PTS system sugar-specific permease component M662_01120 PF00107 Zinc-binding dehydrogenase M662_01120 PF08240 Alcohol dehydrogenase GroES-like domain M662_01125 PF00107 Zinc-binding dehydrogenase M662_01125 PF08240 Alcohol dehydrogenase GroES-like domain M662_01130 PF01520 N-acetylmuramoyl-L-alanine amidase M662_01135 PF10609 NUBPL iron-transfer P-loop NTPase M662_01140 PF17898 Spore germination GerD central core domain M662_01145 PF14089 KinB-signalling pathway activation in sporulation M662_01150 PF01522 Polysaccharide deacetylase M662_01225 PF00491 Arginase family M662_01235 PF08281 Sigma-70, region 4 M662_01235 PF04542 Sigma-70 region 2 M662_01240 PF13490 Putative zinc-finger M662_01245 PF02457 DisA bacterial checkpoint controller nucleotide-binding M662_01250 PF07949 YbbR-like protein M662_01255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M662_01255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M662_01255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M662_01255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M662_01260 PF01380 SIS domain M662_01265 PF01098 Cell cycle protein M662_01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_01300 PF00005 ABC transporter M662_01300 PF00664 ABC transporter transmembrane region M662_01305 PF00005 ABC transporter M662_01305 PF00664 ABC transporter transmembrane region M662_01315 PF00753 Metallo-beta-lactamase superfamily M662_01330 PF01266 FAD dependent oxidoreductase M662_01350 PF01022 Bacterial regulatory protein, arsR family M662_01355 PF00403 Heavy-metal-associated domain M662_01360 PF01225 Mur ligase family, catalytic domain M662_01360 PF08245 Mur ligase middle domain M662_01360 PF02875 Mur ligase family, glutamate ligase domain M662_01365 PF06574 FAD synthetase M662_01365 PF01687 Riboflavin kinase M662_01380 PF00248 Aldo/keto reductase family M662_01390 PF07486 Cell Wall Hydrolase M662_01395 PF01235 Sodium:alanine symporter family M662_01400 PF01613 Flavin reductase like domain M662_01405 PF00392 Bacterial regulatory proteins, gntR family M662_01410 PF00005 ABC transporter M662_01420 PF04542 Sigma-70 region 2 M662_01420 PF08281 Sigma-70, region 4 M662_01430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M662_01430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M662_01430 PF00205 Thiamine pyrophosphate enzyme, central domain M662_01435 PF00990 Diguanylate cyclase, GGDEF domain M662_01435 PF03707 Bacterial signalling protein N terminal repeat M662_01435 PF00563 EAL domain M662_01440 PF01497 Periplasmic binding protein M662_01445 PF01032 FecCD transport family M662_01450 PF01032 FecCD transport family M662_01455 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_01460 PF02607 B12 binding domain M662_01460 PF02310 B12 binding domain M662_01460 PF02965 Vitamin B12 dependent methionine synthase, activation domain M662_01460 PF00809 Pterin binding enzyme M662_01460 PF02574 Homocysteine S-methyltransferase M662_01465 PF02574 Homocysteine S-methyltransferase M662_01465 PF02219 Methylenetetrahydrofolate reductase M662_01470 PF01053 Cys/Met metabolism PLP-dependent enzyme M662_01475 PF01053 Cys/Met metabolism PLP-dependent enzyme M662_01485 PF04960 Glutaminase M662_01490 PF02322 Cytochrome bd terminal oxidase subunit II M662_01495 PF01654 Cytochrome bd terminal oxidase subunit I M662_01500 PF01209 ubiE/COQ5 methyltransferase family M662_01505 PF00133 tRNA synthetases class I (I, L, M and V) M662_01505 PF08264 Anticodon-binding domain of tRNA M662_01510 PF02082 Transcriptional regulator M662_01515 PF00881 Nitroreductase family M662_01520 PF07690 Major Facilitator Superfamily M662_01530 PF02445 Quinolinate synthetase A protein M662_01535 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M662_01535 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M662_01540 PF02910 Fumarate reductase flavoprotein C-term M662_01540 PF00890 FAD binding domain M662_01545 PF00266 Aminotransferase class-V M662_01550 PF02386 Cation transport protein M662_01555 PF00005 ABC transporter M662_01560 PF01741 Large-conductance mechanosensitive channel, MscL M662_01565 PF07690 Major Facilitator Superfamily M662_01570 PF06491 Disulphide isomerase M662_01575 PF13769 Virulence factor M662_01575 PF08712 Scaffold protein Nfu/NifU N terminal M662_01580 PF00005 ABC transporter M662_01585 PF12679 ABC-2 family transporter protein M662_01595 PF01226 Formate/nitrite transporter M662_01605 PF07739 TipAS antibiotic-recognition domain M662_01605 PF13411 MerR HTH family regulatory protein M662_01610 PF01476 LysM domain M662_01610 PF06725 3D domain M662_01620 PF00899 ThiF family M662_01645 PF00877 NlpC/P60 family M662_01650 PF02435 Levansucrase/Invertase M662_01655 PF02435 Levansucrase/Invertase M662_01660 PF01594 AI-2E family transporter M662_01665 PF05995 Cysteine dioxygenase type I M662_01670 PF00892 EamA-like transporter family M662_01675 PF03601 Conserved hypothetical protein 698 M662_01680 PF03466 LysR substrate binding domain M662_01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M662_01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M662_01695 PF03466 LysR substrate binding domain M662_01700 PF13426 PAS domain M662_01700 PF01740 STAS domain M662_01705 PF02770 Acyl-CoA dehydrogenase, middle domain M662_01705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M662_01705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_01710 PF01965 DJ-1/PfpI family M662_01720 PF06207 Protein of unknown function (DUF1002) M662_01725 PF02630 SCO1/SenC M662_01730 PF00561 alpha/beta hydrolase fold M662_01745 PF00990 Diguanylate cyclase, GGDEF domain M662_01745 PF03707 Bacterial signalling protein N terminal repeat M662_01745 PF00563 EAL domain M662_01755 PF01053 Cys/Met metabolism PLP-dependent enzyme M662_01760 PF00375 Sodium:dicarboxylate symporter family M662_01765 PF04542 Sigma-70 region 2 M662_01765 PF04545 Sigma-70, region 4 M662_01790 PF01593 Flavin containing amine oxidoreductase M662_01805 PF04542 Sigma-70 region 2 M662_01805 PF08281 Sigma-70, region 4 M662_01815 PF00909 Ammonium Transporter Family M662_01820 PF00543 Nitrogen regulatory protein P-II M662_01825 PF00268 Ribonucleotide reductase, small chain M662_01830 PF03477 ATP cone domain M662_01830 PF00317 Ribonucleotide reductase, all-alpha domain M662_01830 PF02867 Ribonucleotide reductase, barrel domain M662_01835 PF01209 ubiE/COQ5 methyltransferase family M662_01845 PF16242 Pyridoxamine 5'-phosphate oxidase like M662_01855 PF13673 Acetyltransferase (GNAT) domain M662_01860 PF00171 Aldehyde dehydrogenase family M662_01865 PF00881 Nitroreductase family M662_01890 PF00155 Aminotransferase class I and II M662_01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_01895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M662_01900 PF02898 Nitric oxide synthase, oxygenase domain M662_01905 PF00795 Carbon-nitrogen hydrolase M662_01910 PF13492 GAF domain M662_01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_01910 PF06580 Histidine kinase M662_01910 PF07694 5TMR of 5TMR-LYT M662_01915 PF04397 LytTr DNA-binding domain M662_01915 PF00072 Response regulator receiver domain M662_01920 PF02554 Carbon starvation protein CstA M662_01935 PF00781 Diacylglycerol kinase catalytic domain M662_01940 PF07997 Protein of unknown function (DUF1694) M662_01955 PF01464 Transglycosylase SLT domain M662_01960 PF03358 NADPH-dependent FMN reductase M662_01970 PF02566 OsmC-like protein M662_01995 PF02028 BCCT, betaine/carnitine/choline family transporter M662_02005 PF02028 BCCT, betaine/carnitine/choline family transporter M662_02015 PF00085 Thioredoxin M662_02030 PF00005 ABC transporter M662_02030 PF03459 TOBE domain M662_02035 PF00528 Binding-protein-dependent transport system inner membrane component M662_02045 PF13416 Bacterial extracellular solute-binding protein M662_02060 PF00672 HAMP domain M662_02060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_02060 PF02743 Cache domain M662_02065 PF02608 ABC transporter substrate-binding protein PnrA-like M662_02070 PF00296 Luciferase-like monooxygenase M662_02085 PF01554 MatE M662_02100 PF00781 Diacylglycerol kinase catalytic domain M662_02105 PF01047 MarR family M662_02110 PF00005 ABC transporter M662_02110 PF12848 ABC transporter M662_02110 PF16326 ABC transporter C-terminal domain M662_02130 PF02645 Uncharacterised protein, DegV family COG1307 M662_02140 PF00271 Helicase conserved C-terminal domain M662_02140 PF00270 DEAD/DEAH box helicase M662_02145 PF01694 Rhomboid family M662_02150 PF01648 4'-phosphopantetheinyl transferase superfamily M662_02155 PF03853 YjeF-related protein N-terminus M662_02155 PF01256 Carbohydrate kinase M662_02165 PF01168 Alanine racemase, N-terminal domain M662_02165 PF00842 Alanine racemase, C-terminal domain M662_02170 PF01402 Ribbon-helix-helix protein, copG family M662_02175 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system M662_02180 PF08678 Rsbr N terminal M662_02180 PF01740 STAS domain M662_02185 PF01740 STAS domain M662_02190 PF13581 Histidine kinase-like ATPase domain M662_02195 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain M662_02195 PF07228 Stage II sporulation protein E (SpoIIE) M662_02200 PF01740 STAS domain M662_02205 PF13581 Histidine kinase-like ATPase domain M662_02210 PF04545 Sigma-70, region 4 M662_02210 PF04539 Sigma-70 region 3 M662_02210 PF04542 Sigma-70 region 2 M662_02220 PF16921 Tex protein YqgF-like domain M662_02220 PF09371 Tex-like protein N-terminal domain M662_02220 PF00575 S1 RNA binding domain M662_02220 PF17674 HHH domain M662_02230 PF10263 SprT-like family M662_02320 PF00586 AIR synthase related protein, N-terminal domain M662_02320 PF02769 AIR synthase related protein, C-terminal domain M662_02325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M662_02330 PF00814 Glycoprotease family M662_02335 PF00583 Acetyltransferase (GNAT) family M662_02340 PF00814 Glycoprotease family M662_02345 PF12848 ABC transporter M662_02345 PF16326 ABC transporter C-terminal domain M662_02345 PF00005 ABC transporter M662_02350 PF01967 MoaC family M662_02355 PF06971 Putative DNA-binding protein N-terminus M662_02355 PF02629 CoA binding domain M662_02365 PF07690 Major Facilitator Superfamily M662_02375 PF02517 CPBP intramembrane metalloprotease M662_02380 PF00166 Chaperonin 10 Kd subunit M662_02385 PF00118 TCP-1/cpn60 chaperonin family M662_02410 PF01979 Amidohydrolase family M662_02420 PF01546 Peptidase family M20/M25/M40 M662_02420 PF07687 Peptidase dimerisation domain M662_02425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M662_02425 PF03466 LysR substrate binding domain M662_02440 PF12833 Helix-turn-helix domain M662_02445 PF01566 Natural resistance-associated macrophage protein M662_02455 PF00171 Aldehyde dehydrogenase family M662_02460 PF00732 GMC oxidoreductase M662_02460 PF05199 GMC oxidoreductase M662_02465 PF00149 Calcineurin-like phosphoesterase M662_02475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M662_02490 PF02779 Transketolase, pyrimidine binding domain M662_02490 PF00456 Transketolase, thiamine diphosphate binding domain M662_02490 PF02780 Transketolase, C-terminal domain M662_02495 PF02811 PHP domain M662_02505 PF03553 Na+/H+ antiporter family M662_02510 PF03553 Na+/H+ antiporter family M662_02515 PF00710 Asparaginase, N-terminal M662_02515 PF17763 Glutaminase/Asparaginase C-terminal domain M662_02520 PF00206 Lyase M662_02520 PF10415 Fumarase C C-terminus M662_02525 PF01381 Helix-turn-helix M662_02530 PF00710 Asparaginase, N-terminal M662_02530 PF17763 Glutaminase/Asparaginase C-terminal domain M662_02545 PF00072 Response regulator receiver domain M662_02545 PF00486 Transcriptional regulatory protein, C terminal M662_02550 PF00512 His Kinase A (phospho-acceptor) domain M662_02550 PF00672 HAMP domain M662_02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_02555 PF02630 SCO1/SenC M662_02560 PF13115 YtkA-like M662_02565 PF04304 Protein of unknown function (DUF454) M662_02570 PF01039 Carboxyl transferase domain M662_02575 PF00501 AMP-binding enzyme M662_02575 PF13193 AMP-binding enzyme C-terminal domain M662_02590 PF03972 MmgE/PrpD family M662_02595 PF00285 Citrate synthase, C-terminal domain M662_02605 PF13460 NAD(P)H-binding M662_02610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M662_02610 PF01411 tRNA synthetases class II (A) M662_02610 PF02272 DHHA1 domain M662_02615 PF00884 Sulfatase M662_02620 PF02522 Aminoglycoside 3-N-acetyltransferase M662_02630 PF03600 Citrate transporter M662_02630 PF02080 TrkA-C domain M662_02635 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M662_02640 PF01915 Glycosyl hydrolase family 3 C-terminal domain M662_02640 PF00933 Glycosyl hydrolase family 3 N terminal domain M662_02640 PF14310 Fibronectin type III-like domain M662_02645 PF01547 Bacterial extracellular solute-binding protein M662_02650 PF00528 Binding-protein-dependent transport system inner membrane component M662_02655 PF00528 Binding-protein-dependent transport system inner membrane component M662_02665 PF00356 Bacterial regulatory proteins, lacI family M662_02670 PF01098 Cell cycle protein M662_02680 PF01098 Cell cycle protein M662_02685 PF03551 Transcriptional regulator PadR-like family M662_02685 PF10400 Virulence activator alpha C-term M662_02690 PF05870 Phenolic acid decarboxylase (PAD) M662_02700 PF03176 MMPL family M662_02710 PF00365 Phosphofructokinase M662_02715 PF05684 Protein of unknown function (DUF819) M662_02720 PF00067 Cytochrome P450 M662_02725 PF00274 Fructose-bisphosphate aldolase class-I M662_02730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M662_02735 PF00528 Binding-protein-dependent transport system inner membrane component M662_02745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_02745 PF00005 ABC transporter M662_02750 PF00005 ABC transporter M662_02750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_02760 PF06018 CodY GAF-like domain M662_02760 PF17853 GGDEF-like domain M662_02760 PF13556 PucR C-terminal helix-turn-helix domain M662_02765 PF01979 Amidohydrolase family M662_02770 PF04198 Putative sugar-binding domain M662_02770 PF13936 Helix-turn-helix domain M662_02775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M662_02780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M662_02780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M662_02790 PF13180 PDZ domain M662_02800 PF00486 Transcriptional regulatory protein, C terminal M662_02800 PF00072 Response regulator receiver domain M662_02805 PF00989 PAS fold M662_02805 PF00512 His Kinase A (phospho-acceptor) domain M662_02805 PF16736 Single Cache-like M662_02805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_02810 PF03358 NADPH-dependent FMN reductase M662_02830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M662_02830 PF14572 Phosphoribosyl synthetase-associated domain M662_02835 PF12146 Serine aminopeptidase, S33 M662_02845 PF12833 Helix-turn-helix domain M662_02845 PF00072 Response regulator receiver domain M662_02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_02850 PF02743 Cache domain M662_02850 PF06580 Histidine kinase M662_02850 PF00672 HAMP domain M662_02855 PF13416 Bacterial extracellular solute-binding protein M662_02860 PF00528 Binding-protein-dependent transport system inner membrane component M662_02865 PF00528 Binding-protein-dependent transport system inner membrane component M662_02870 PF00703 Glycosyl hydrolases family 2 M662_02870 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M662_02870 PF02929 Beta galactosidase small chain M662_02870 PF16353 Domain of unknown function(DUF4981) M662_02870 PF02837 Glycosyl hydrolases family 2, sugar binding domain M662_02875 PF01301 Glycosyl hydrolases family 35 M662_02890 PF00768 D-alanyl-D-alanine carboxypeptidase M662_02890 PF07943 Penicillin-binding protein 5, C-terminal domain M662_02900 PF01614 Bacterial transcriptional regulator M662_02900 PF09339 IclR helix-turn-helix domain M662_02905 PF00294 pfkB family carbohydrate kinase M662_02910 PF01081 KDPG and KHG aldolase M662_02915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M662_02915 PF13378 Enolase C-terminal domain-like M662_02920 PF02447 GntP family permease M662_02930 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M662_02950 PF00583 Acetyltransferase (GNAT) family M662_02955 PF00860 Permease family M662_02960 PF00156 Phosphoribosyl transferase domain M662_02975 PF02535 ZIP Zinc transporter M662_02990 PF03717 Penicillin-binding Protein dimerisation domain M662_02990 PF00905 Penicillin binding protein transpeptidase domain M662_02990 PF05223 NTF2-like N-terminal transpeptidase domain M662_02995 PF04229 GrpB protein M662_02995 PF13673 Acetyltransferase (GNAT) domain M662_03000 PF07849 Protein of unknown function (DUF1641) M662_03005 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_03010 PF00375 Sodium:dicarboxylate symporter family M662_03015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M662_03025 PF02719 Polysaccharide biosynthesis protein M662_03030 PF04101 Glycosyltransferase family 28 C-terminal domain M662_03030 PF03033 Glycosyltransferase family 28 N-terminal domain M662_03035 PF16363 GDP-mannose 4,6 dehydratase M662_03040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M662_03055 PF08666 SAF domain M662_03055 PF03102 NeuB family M662_03060 PF02348 Cytidylyltransferase M662_03065 PF07726 ATPase family associated with various cellular activities (AAA) M662_03065 PF17863 AAA lid domain M662_03070 PF01882 Protein of unknown function DUF58 M662_03075 PF01841 Transglutaminase-like superfamily M662_03075 PF11992 Domain of unknown function (DUF3488) M662_03075 PF13559 Domain of unknown function (DUF4129) M662_03080 PF02540 NAD synthase M662_03080 PF00117 Glutamine amidotransferase class-I M662_03080 PF00958 GMP synthase C terminal domain M662_03085 PF00860 Permease family M662_03095 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M662_03105 PF00731 AIR carboxylase M662_03110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M662_03110 PF02222 ATP-grasp domain M662_03115 PF10397 Adenylosuccinate lyase C-terminus M662_03115 PF00206 Lyase M662_03120 PF01259 SAICAR synthetase M662_03125 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase M662_03135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M662_03135 PF02769 AIR synthase related protein, C-terminal domain M662_03135 PF00586 AIR synthase related protein, N-terminal domain M662_03140 PF00156 Phosphoribosyl transferase domain M662_03145 PF02769 AIR synthase related protein, C-terminal domain M662_03145 PF00586 AIR synthase related protein, N-terminal domain M662_03150 PF00551 Formyl transferase M662_03155 PF01808 AICARFT/IMPCHase bienzyme M662_03155 PF02142 MGS-like domain M662_03160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M662_03160 PF02843 Phosphoribosylglycinamide synthetase, C domain M662_03160 PF02844 Phosphoribosylglycinamide synthetase, N domain M662_03170 PF01979 Amidohydrolase family M662_03170 PF13382 Adenine deaminase C-terminal domain M662_03175 PF17479 Protein of unknown function (DUF3048) C-terminal domain M662_03175 PF11258 Protein of unknown function (DUF3048) N-terminal domain M662_03180 PF01371 Trp repressor protein M662_03190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M662_03190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M662_03195 PF01884 PcrB family M662_03200 PF00580 UvrD/REP helicase N-terminal domain M662_03200 PF13361 UvrD-like helicase C-terminal domain M662_03205 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M662_03205 PF01653 NAD-dependent DNA ligase adenylation domain M662_03205 PF00533 BRCA1 C Terminus (BRCT) domain M662_03205 PF12826 Helix-hairpin-helix motif M662_03205 PF03120 NAD-dependent DNA ligase OB-fold domain M662_03210 PF07537 CamS sex pheromone cAM373 precursor M662_03215 PF00171 Aldehyde dehydrogenase family M662_03220 PF00474 Sodium:solute symporter family M662_03225 PF02686 Glu-tRNAGln amidotransferase C subunit M662_03230 PF01425 Amidase M662_03235 PF02934 GatB/GatE catalytic domain M662_03235 PF02637 GatB domain M662_03240 PF00781 Diacylglycerol kinase catalytic domain M662_03245 PF05958 tRNA (Uracil-5-)-methyltransferase M662_03245 PF01938 TRAM domain M662_03250 PF13408 Recombinase zinc beta ribbon domain M662_03250 PF07508 Recombinase M662_03335 PF00665 Integrase core domain M662_03340 PF01695 IstB-like ATP binding protein M662_03370 PF13732 Domain of unknown function (DUF4162) M662_03370 PF00005 ABC transporter M662_03375 PF00141 Peroxidase M662_03380 PF00171 Aldehyde dehydrogenase family M662_03385 PF00465 Iron-containing alcohol dehydrogenase M662_03400 PF13361 UvrD-like helicase C-terminal domain M662_03400 PF00580 UvrD/REP helicase N-terminal domain M662_03420 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M662_03425 PF01717 Cobalamin-independent synthase, Catalytic domain M662_03425 PF08267 Cobalamin-independent synthase, N-terminal domain M662_03430 PF00875 DNA photolyase M662_03430 PF03441 FAD binding domain of DNA photolyase M662_03435 PF01497 Periplasmic binding protein M662_03440 PF01032 FecCD transport family M662_03445 PF01032 FecCD transport family M662_03450 PF02435 Levansucrase/Invertase M662_03455 PF00251 Glycosyl hydrolases family 32 N-terminal domain M662_03455 PF08244 Glycosyl hydrolases family 32 C terminal M662_03460 PF02681 Divergent PAP2 family M662_03480 PF13188 PAS domain M662_03480 PF03707 Bacterial signalling protein N terminal repeat M662_03480 PF00563 EAL domain M662_03480 PF00990 Diguanylate cyclase, GGDEF domain M662_03485 PF01063 Amino-transferase class IV M662_03490 PF01156 Inosine-uridine preferring nucleoside hydrolase M662_03495 PF00440 Bacterial regulatory proteins, tetR family M662_03500 PF07690 Major Facilitator Superfamily M662_03505 PF07722 Peptidase C26 M662_03510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M662_03515 PF00528 Binding-protein-dependent transport system inner membrane component M662_03520 PF12911 N-terminal TM domain of oligopeptide transport permease C M662_03520 PF00528 Binding-protein-dependent transport system inner membrane component M662_03525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_03525 PF00005 ABC transporter M662_03530 PF00005 ABC transporter M662_03530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_03535 PF03358 NADPH-dependent FMN reductase M662_03540 PF03466 LysR substrate binding domain M662_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M662_03545 PF00248 Aldo/keto reductase family M662_03550 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M662_03555 PF00245 Alkaline phosphatase M662_03580 PF00324 Amino acid permease M662_03585 PF02574 Homocysteine S-methyltransferase M662_03590 PF00392 Bacterial regulatory proteins, gntR family M662_03590 PF07729 FCD domain M662_03595 PF00202 Aminotransferase class-III M662_03600 PF13520 Amino acid permease M662_03605 PF00171 Aldehyde dehydrogenase family M662_03615 PF01047 MarR family M662_03620 PF01061 ABC-2 type transporter M662_03625 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_03625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M662_03655 PF13302 Acetyltransferase (GNAT) domain M662_03660 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M662_03665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M662_03665 PF07685 CobB/CobQ-like glutamine amidotransferase domain M662_03670 PF07685 CobB/CobQ-like glutamine amidotransferase domain M662_03670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M662_03675 PF01497 Periplasmic binding protein M662_03680 PF01032 FecCD transport family M662_03685 PF00005 ABC transporter M662_03690 PF03186 CobD/Cbib protein M662_03695 PF00155 Aminotransferase class I and II M662_03700 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M662_03705 PF02654 Cobalamin-5-phosphate synthase M662_03710 PF00300 Histidine phosphatase superfamily (branch 1) M662_03720 PF05525 Branched-chain amino acid transport protein M662_03725 PF00313 'Cold-shock' DNA-binding domain M662_03730 PF00356 Bacterial regulatory proteins, lacI family M662_03735 PF01547 Bacterial extracellular solute-binding protein M662_03740 PF00528 Binding-protein-dependent transport system inner membrane component M662_03745 PF00528 Binding-protein-dependent transport system inner membrane component M662_03750 PF11975 Family 4 glycosyl hydrolase C-terminal domain M662_03750 PF02056 Family 4 glycosyl hydrolase M662_03755 PF06803 Protein of unknown function (DUF1232) M662_03765 PF00990 Diguanylate cyclase, GGDEF domain M662_03765 PF03707 Bacterial signalling protein N terminal repeat M662_03765 PF00563 EAL domain M662_03770 PF00072 Response regulator receiver domain M662_03770 PF00196 Bacterial regulatory proteins, luxR family M662_03790 PF03413 Peptidase propeptide and YPEB domain M662_03790 PF01447 Thermolysin metallopeptidase, catalytic domain M662_03790 PF02868 Thermolysin metallopeptidase, alpha-helical domain M662_03790 PF07504 Fungalysin/Thermolysin Propeptide Motif M662_03800 PF00664 ABC transporter transmembrane region M662_03800 PF00005 ABC transporter M662_03805 PF12833 Helix-turn-helix domain M662_03815 PF13411 MerR HTH family regulatory protein M662_03815 PF13152 Protein of unknown function (DUF3967) M662_03820 PF00893 Small Multidrug Resistance protein M662_03825 PF00893 Small Multidrug Resistance protein M662_03830 PF04231 Endonuclease I M662_03835 PF07690 Major Facilitator Superfamily M662_03845 PF00571 CBS domain M662_03845 PF03471 Transporter associated domain M662_03845 PF01595 Cyclin M transmembrane N-terminal domain M662_03855 PF00672 HAMP domain M662_03855 PF12729 Four helix bundle sensory module for signal transduction M662_03855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_03870 PF00188 Cysteine-rich secretory protein family M662_03880 PF00005 ABC transporter M662_03895 PF00528 Binding-protein-dependent transport system inner membrane component M662_03900 PF00005 ABC transporter M662_03915 PF01915 Glycosyl hydrolase family 3 C-terminal domain M662_03915 PF00933 Glycosyl hydrolase family 3 N terminal domain M662_03920 PF07075 Protein of unknown function (DUF1343) M662_03925 PF00939 Sodium:sulfate symporter transmembrane region M662_03940 PF04264 YceI-like domain M662_03945 PF13411 MerR HTH family regulatory protein M662_03955 PF01594 AI-2E family transporter M662_03970 PF01740 STAS domain M662_03985 PF06724 Domain of Unknown Function (DUF1206) M662_03990 PF12728 Helix-turn-helix domain M662_03995 PF01042 Endoribonuclease L-PSP M662_04005 PF02554 Carbon starvation protein CstA M662_04015 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_04030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M662_04030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M662_04035 PF00311 Phosphoenolpyruvate carboxylase M662_04055 PF01625 Peptide methionine sulfoxide reductase M662_04060 PF04346 Ethanolamine utilisation protein, EutH M662_04080 PF04239 Protein of unknown function (DUF421) M662_04085 PF00085 Thioredoxin M662_04090 PF03807 NADP oxidoreductase coenzyme F420-dependent M662_04090 PF14748 Pyrroline-5-carboxylate reductase dimerisation M662_04095 PF00696 Amino acid kinase family M662_04095 PF01472 PUA domain M662_04100 PF00171 Aldehyde dehydrogenase family M662_04105 PF01740 STAS domain M662_04125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M662_04125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M662_04135 PF01636 Phosphotransferase enzyme family M662_04140 PF04029 2-phosphosulpholactate phosphatase M662_04145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_04145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_04145 PF02770 Acyl-CoA dehydrogenase, middle domain M662_04150 PF00378 Enoyl-CoA hydratase/isomerase M662_04155 PF00107 Zinc-binding dehydrogenase M662_04155 PF08240 Alcohol dehydrogenase GroES-like domain M662_04160 PF13302 Acetyltransferase (GNAT) domain M662_04165 PF07286 Protein of unknown function (DUF1445) M662_04170 PF01566 Natural resistance-associated macrophage protein M662_04175 PF03746 LamB/YcsF family M662_04180 PF02626 Carboxyltransferase domain, subdomain A and B M662_04185 PF02682 Carboxyltransferase domain, subdomain C and D M662_04190 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) M662_04200 PF09962 Uncharacterized conserved protein (DUF2196) M662_04205 PF08240 Alcohol dehydrogenase GroES-like domain M662_04205 PF00107 Zinc-binding dehydrogenase M662_04220 PF00158 Sigma-54 interaction domain M662_04220 PF02954 Bacterial regulatory protein, Fis family M662_04220 PF13426 PAS domain M662_04225 PF03606 C4-dicarboxylate anaerobic carrier M662_04230 PF01979 Amidohydrolase family M662_04235 PF13539 D-alanyl-D-alanine carboxypeptidase M662_04265 PF03475 3-alpha domain M662_04265 PF03473 MOSC domain M662_04270 PF09350 Domain of unknown function (DUF1992) M662_04275 PF02586 SOS response associated peptidase (SRAP) M662_04280 PF01235 Sodium:alanine symporter family M662_04285 PF01451 Low molecular weight phosphotyrosine protein phosphatase M662_04295 PF03631 Virulence factor BrkB M662_04305 PF00497 Bacterial extracellular solute-binding proteins, family 3 M662_04310 PF00528 Binding-protein-dependent transport system inner membrane component M662_04315 PF00005 ABC transporter M662_04320 PF00950 ABC 3 transport family M662_04325 PF01475 Ferric uptake regulator family M662_04330 PF01297 Zinc-uptake complex component A periplasmic M662_04335 PF07690 Major Facilitator Superfamily M662_04350 PF14167 YfkD-like protein M662_04355 PF00924 Mechanosensitive ion channel M662_04365 PF13726 Na+-H+ antiporter family M662_04365 PF03553 Na+/H+ antiporter family M662_04370 PF01522 Polysaccharide deacetylase M662_04375 PF00730 HhH-GPD superfamily base excision DNA repair protein M662_04380 PF00512 His Kinase A (phospho-acceptor) domain M662_04380 PF00989 PAS fold M662_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_04380 PF08447 PAS fold M662_04385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M662_04385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M662_04390 PF00392 Bacterial regulatory proteins, gntR family M662_04390 PF07729 FCD domain M662_04395 PF13193 AMP-binding enzyme C-terminal domain M662_04395 PF00501 AMP-binding enzyme M662_04405 PF13456 Reverse transcriptase-like M662_04410 PF03734 L,D-transpeptidase catalytic domain M662_04410 PF01476 LysM domain M662_04415 PF01842 ACT domain M662_04415 PF00551 Formyl transferase M662_04420 PF00171 Aldehyde dehydrogenase family M662_04445 PF00296 Luciferase-like monooxygenase M662_04460 PF01329 Pterin 4 alpha carbinolamine dehydratase M662_04465 PF00849 RNA pseudouridylate synthase M662_04465 PF01479 S4 domain M662_04480 PF02585 GlcNAc-PI de-N-acetylase M662_04485 PF02540 NAD synthase M662_04490 PF00857 Isochorismatase family M662_04495 PF01625 Peptide methionine sulfoxide reductase M662_04505 PF00893 Small Multidrug Resistance protein M662_04510 PF00893 Small Multidrug Resistance protein M662_04515 PF17754 MftR C-terminal domain M662_04515 PF00440 Bacterial regulatory proteins, tetR family M662_04530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M662_04530 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_04535 PF13361 UvrD-like helicase C-terminal domain M662_04535 PF00580 UvrD/REP helicase N-terminal domain M662_04560 PF01906 Putative heavy-metal-binding M662_04580 PF08281 Sigma-70, region 4 M662_04580 PF04542 Sigma-70 region 2 M662_04585 PF00425 chorismate binding enzyme M662_04585 PF04715 Anthranilate synthase component I, N terminal region M662_04590 PF00591 Glycosyl transferase family, a/b domain M662_04590 PF02885 Glycosyl transferase family, helical bundle domain M662_04595 PF00218 Indole-3-glycerol phosphate synthase M662_04600 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M662_04605 PF00291 Pyridoxal-phosphate dependent enzyme M662_04610 PF00290 Tryptophan synthase alpha chain M662_04615 PF00117 Glutamine amidotransferase class-I M662_04620 PF12729 Four helix bundle sensory module for signal transduction M662_04620 PF00672 HAMP domain M662_04620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_04635 PF01758 Sodium Bile acid symporter family M662_04640 PF01569 PAP2 superfamily M662_04650 PF04055 Radical SAM superfamily M662_04655 PF01242 6-pyruvoyl tetrahydropterin synthase M662_04660 PF06508 Queuosine biosynthesis protein QueC M662_04665 PF00764 Arginosuccinate synthase M662_04670 PF00206 Lyase M662_04670 PF14698 Argininosuccinate lyase C-terminal M662_04680 PF00246 Zinc carboxypeptidase M662_04680 PF01476 LysM domain M662_04685 PF00271 Helicase conserved C-terminal domain M662_04685 PF00270 DEAD/DEAH box helicase M662_04690 PF13649 Methyltransferase domain M662_04695 PF02664 S-Ribosylhomocysteinase (LuxS) M662_04700 PF00291 Pyridoxal-phosphate dependent enzyme M662_04705 PF01053 Cys/Met metabolism PLP-dependent enzyme M662_04710 PF01258 Prokaryotic dksA/traR C4-type zinc finger M662_04720 PF00563 EAL domain M662_04720 PF00990 Diguanylate cyclase, GGDEF domain M662_04720 PF03707 Bacterial signalling protein N terminal repeat M662_04745 PF01979 Amidohydrolase family M662_04750 PF01370 NAD dependent epimerase/dehydratase family M662_04750 PF08338 Domain of unknown function (DUF1731) M662_04755 PF02631 RecX family M662_04765 PF03123 CAT RNA binding domain M662_04765 PF00874 PRD domain M662_04770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M662_04770 PF02378 Phosphotransferase system, EIIC M662_04770 PF00367 phosphotransferase system, EIIB M662_04775 PF00381 PTS HPr component phosphorylation site M662_04780 PF00106 short chain dehydrogenase M662_04785 PF08838 Protein of unknown function (DUF1811) M662_04805 PF04307 LexA-binding, inner membrane-associated putative hydrolase M662_04810 PF14815 NUDIX domain M662_04810 PF00730 HhH-GPD superfamily base excision DNA repair protein M662_04820 PF01476 LysM domain M662_04820 PF00877 NlpC/P60 family M662_04830 PF04167 Protein of unknown function (DUF402) M662_04835 PF00005 ABC transporter M662_04835 PF00664 ABC transporter transmembrane region M662_04840 PF06081 Aromatic acid exporter family member 1 M662_04845 PF00202 Aminotransferase class-III M662_04855 PF07885 Ion channel M662_04860 PF00578 AhpC/TSA family M662_04865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M662_04870 PF01923 Cobalamin adenosyltransferase M662_04875 PF01475 Ferric uptake regulator family M662_04880 PF11023 Zinc-ribbon containing domain M662_04885 PF14540 Nucleotidyltransferase-like M662_04885 PF18576 Helix-turn-helix domain M662_04985 PF13382 Adenine deaminase C-terminal domain M662_04985 PF01979 Amidohydrolase family M662_05015 PF08331 Domain of unknown function (DUF1730) M662_05020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M662_05020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M662_05025 PF12671 Putative amidase domain M662_05030 PF00588 SpoU rRNA Methylase family M662_05040 PF04055 Radical SAM superfamily M662_05040 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M662_05045 PF03099 Biotin/lipoate A/B protein ligase family M662_05055 PF06798 PrkA serine protein kinase C-terminal domain M662_05055 PF08298 PrkA AAA domain M662_05060 PF02541 Ppx/GppA phosphatase family M662_05065 PF13090 Polyphosphate kinase C-terminal domain 2 M662_05065 PF13089 Polyphosphate kinase N-terminal domain M662_05065 PF02503 Polyphosphate kinase middle domain M662_05065 PF17941 Polyphosphate kinase C-terminal domain 1 M662_05070 PF16870 2-oxoglutarate dehydrogenase C-terminal M662_05070 PF00676 Dehydrogenase E1 component M662_05070 PF02779 Transketolase, pyrimidine binding domain M662_05075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M662_05075 PF00364 Biotin-requiring enzyme M662_05075 PF02817 e3 binding domain M662_05085 PF02096 60Kd inner membrane protein M662_05090 PF04285 Protein of unknown function (DUF444) M662_05095 PF03807 NADP oxidoreductase coenzyme F420-dependent M662_05095 PF14748 Pyrroline-5-carboxylate reductase dimerisation M662_05100 PF03703 Bacterial PH domain M662_05105 PF03703 Bacterial PH domain M662_05110 PF00860 Permease family M662_05115 PF03323 Bacillus/Clostridium GerA spore germination protein M662_05125 PF05504 Spore germination B3/ GerAC like, C-terminal M662_05130 PF07662 Na+ dependent nucleoside transporter C-terminus M662_05130 PF01773 Na+ dependent nucleoside transporter N-terminus M662_05135 PF01554 MatE M662_05140 PF04101 Glycosyltransferase family 28 C-terminal domain M662_05140 PF03033 Glycosyltransferase family 28 N-terminal domain M662_05145 PF13426 PAS domain M662_05145 PF08447 PAS fold M662_05145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_05170 PF03845 Spore germination protein M662_05175 PF03323 Bacillus/Clostridium GerA spore germination protein M662_05185 PF13180 PDZ domain M662_05190 PF03358 NADPH-dependent FMN reductase M662_05195 PF04542 Sigma-70 region 2 M662_05200 PF12791 Anti-sigma factor N-terminus M662_05210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M662_05210 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_05220 PF00795 Carbon-nitrogen hydrolase M662_05220 PF00583 Acetyltransferase (GNAT) family M662_05225 PF14148 YhdB-like protein M662_05235 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M662_05240 PF04293 SpoVR like protein M662_05250 PF01063 Amino-transferase class IV M662_05265 PF00106 short chain dehydrogenase M662_05270 PF02016 LD-carboxypeptidase N-terminal domain M662_05270 PF17676 LD-carboxypeptidase C-terminal domain M662_05275 PF01872 RibD C-terminal domain M662_05280 PF00892 EamA-like transporter family M662_05290 PF13302 Acetyltransferase (GNAT) domain M662_05295 PF01740 STAS domain M662_05295 PF00916 Sulfate permease family M662_05300 PF00582 Universal stress protein family M662_05310 PF00005 ABC transporter M662_05320 PF12464 Maltose acetyltransferase M662_05320 PF14602 Hexapeptide repeat of succinyl-transferase M662_05325 PF00557 Metallopeptidase family M24 M662_05330 PF00313 'Cold-shock' DNA-binding domain M662_05340 PF00561 alpha/beta hydrolase fold M662_05345 PF01497 Periplasmic binding protein M662_05350 PF00753 Metallo-beta-lactamase superfamily M662_05360 PF03591 AzlC protein M662_05375 PF00583 Acetyltransferase (GNAT) family M662_05380 PF16916 Dimerisation domain of Zinc Transporter M662_05380 PF01545 Cation efflux family M662_05385 PF03358 NADPH-dependent FMN reductase M662_05390 PF08858 IDEAL domain M662_05390 PF08864 UPF0302 domain M662_05395 PF02557 D-alanyl-D-alanine carboxypeptidase M662_05400 PF13460 NAD(P)H-binding M662_05405 PF00206 Lyase M662_05405 PF10415 Fumarase C C-terminus M662_05410 PF00269 Small, acid-soluble spore proteins, alpha/beta type M662_05420 PF00005 ABC transporter M662_05420 PF17912 MalK OB fold domain M662_05420 PF03459 TOBE domain M662_05425 PF13556 PucR C-terminal helix-turn-helix domain M662_05430 PF02583 Metal-sensitive transcriptional repressor M662_05435 PF04286 Protein of unknown function (DUF445) M662_05440 PF06133 Control of competence regulator ComK, YlbF/YmcA M662_05445 PF00378 Enoyl-CoA hydratase/isomerase M662_05455 PF13732 Domain of unknown function (DUF4162) M662_05455 PF00005 ABC transporter M662_05465 PF00149 Calcineurin-like phosphoesterase M662_05470 PF13514 AAA domain M662_05475 PF07690 Major Facilitator Superfamily M662_05480 PF14147 Sporulation protein YhaL M662_05495 PF11667 Putative zincin peptidase M662_05500 PF08963 Protein of unknown function (DUF1878) M662_05505 PF01047 MarR family M662_05515 PF17099 Tryptophan transporter TrpP M662_05520 PF01230 HIT domain M662_05525 PF00005 ABC transporter M662_05530 PF05975 Bacterial ABC transporter protein EcsB M662_05535 PF12787 EcsC protein family M662_05540 PF01546 Peptidase family M20/M25/M40 M662_05540 PF07687 Peptidase dimerisation domain M662_05550 PF02600 Disulfide bond formation protein DsbB M662_05560 PF03992 Antibiotic biosynthesis monooxygenase M662_05565 PF00912 Transglycosylase M662_05565 PF00905 Penicillin binding protein transpeptidase domain M662_05570 PF01208 Uroporphyrinogen decarboxylase (URO-D) M662_05585 PF01156 Inosine-uridine preferring nucleoside hydrolase M662_05590 PF00356 Bacterial regulatory proteins, lacI family M662_05600 PF12706 Beta-lactamase superfamily domain M662_05605 PF10437 Bacterial lipoate protein ligase C-terminus M662_05605 PF03099 Biotin/lipoate A/B protein ligase family M662_05610 PF00501 AMP-binding enzyme M662_05610 PF13193 AMP-binding enzyme C-terminal domain M662_05630 PF06338 ComK protein M662_05640 PF09335 SNARE associated Golgi protein M662_05645 PF10502 Signal peptidase, peptidase S26 M662_05650 PF12705 PD-(D/E)XK nuclease superfamily M662_05655 PF00580 UvrD/REP helicase N-terminal domain M662_05655 PF12705 PD-(D/E)XK nuclease superfamily M662_05655 PF13361 UvrD-like helicase C-terminal domain M662_05665 PF10676 Spore germination protein gerPA/gerPF M662_05680 PF10737 Spore germination protein GerPC M662_05685 PF10803 Spore germination GerPB M662_05690 PF10676 Spore germination protein gerPA/gerPF M662_05695 PF04235 Protein of unknown function (DUF418) M662_05710 PF00202 Aminotransferase class-III M662_05715 PF07457 Protein of unknown function (DUF1516) M662_05720 PF00733 Asparagine synthase M662_05720 PF13537 Glutamine amidotransferase domain M662_05725 PF02903 Alpha amylase, N-terminal ig-like domain M662_05725 PF00128 Alpha amylase, catalytic domain M662_05735 PF10676 Spore germination protein gerPA/gerPF M662_05740 PF00011 Hsp20/alpha crystallin family M662_05750 PF02645 Uncharacterised protein, DegV family COG1307 M662_05755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M662_05755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M662_05790 PF00326 Prolyl oligopeptidase family M662_05795 PF01883 Iron-sulfur cluster assembly protein M662_05805 PF02391 MoaE protein M662_05810 PF02597 ThiS family M662_05815 PF02673 Bacitracin resistance protein BacA M662_05830 PF02608 ABC transporter substrate-binding protein PnrA-like M662_05840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M662_05840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M662_05845 PF02801 Beta-ketoacyl synthase, C-terminal domain M662_05845 PF00109 Beta-ketoacyl synthase, N-terminal domain M662_05850 PF03816 Cell envelope-related transcriptional attenuator domain M662_05860 PF12227 Protein of unknown function (DUF3603) M662_05865 PF00579 tRNA synthetases class I (W and Y) M662_05875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M662_05880 PF00528 Binding-protein-dependent transport system inner membrane component M662_05885 PF00528 Binding-protein-dependent transport system inner membrane component M662_05885 PF12911 N-terminal TM domain of oligopeptide transport permease C M662_05890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_05890 PF00005 ABC transporter M662_05895 PF00005 ABC transporter M662_05895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_05905 PF13508 Acetyltransferase (GNAT) domain M662_05910 PF03960 ArsC family M662_05915 PF03741 Integral membrane protein TerC family M662_05920 PF05389 Negative regulator of genetic competence (MecA) M662_05930 PF01432 Peptidase family M3 M662_05930 PF08439 Oligopeptidase F M662_05940 PF01152 Bacterial-like globin M662_05945 PF01928 CYTH domain M662_05950 PF04607 Region found in RelA / SpoT proteins M662_05955 PF01513 ATP-NAD kinase M662_05960 PF00849 RNA pseudouridylate synthase M662_05965 PF00149 Calcineurin-like phosphoesterase M662_05970 PF03448 MgtE intracellular N domain M662_05970 PF01769 Divalent cation transporter M662_05970 PF00571 CBS domain M662_05975 PF02254 TrkA-N domain M662_05975 PF00999 Sodium/hydrogen exchanger family M662_05975 PF02080 TrkA-C domain M662_05985 PF01590 GAF domain M662_05985 PF00158 Sigma-54 interaction domain M662_05985 PF02954 Bacterial regulatory protein, Fis family M662_05990 PF01425 Amidase M662_05995 PF00206 Lyase M662_05995 PF10415 Fumarase C C-terminus M662_06020 PF07098 Protein of unknown function (DUF1360) M662_06035 PF04239 Protein of unknown function (DUF421) M662_06040 PF13673 Acetyltransferase (GNAT) domain M662_06050 PF00756 Putative esterase M662_06060 PF00893 Small Multidrug Resistance protein M662_06065 PF00893 Small Multidrug Resistance protein M662_06070 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M662_06075 PF18665 Tetracyclin repressor-like, C-terminal domain M662_06075 PF00440 Bacterial regulatory proteins, tetR family M662_06080 PF03551 Transcriptional regulator PadR-like family M662_06085 PF01098 Cell cycle protein M662_06100 PF00255 Glutathione peroxidase M662_06115 PF01522 Polysaccharide deacetylase M662_06125 PF00440 Bacterial regulatory proteins, tetR family M662_06125 PF17922 Tetracyclin repressor-like, C-terminal domain M662_06140 PF03551 Transcriptional regulator PadR-like family M662_06150 PF10011 Predicted membrane protein (DUF2254) M662_06175 PF00171 Aldehyde dehydrogenase family M662_06180 PF00795 Carbon-nitrogen hydrolase M662_06185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M662_06185 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_06190 PF01180 Dihydroorotate dehydrogenase M662_06195 PF01979 Amidohydrolase family M662_06200 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M662_06215 PF05651 Putative sugar diacid recognition M662_06215 PF17853 GGDEF-like domain M662_06215 PF13556 PucR C-terminal helix-turn-helix domain M662_06220 PF00202 Aminotransferase class-III M662_06230 PF03551 Transcriptional regulator PadR-like family M662_06285 PF13443 Cro/C1-type HTH DNA-binding domain M662_06305 PF04055 Radical SAM superfamily M662_06325 PF00196 Bacterial regulatory proteins, luxR family M662_06325 PF17874 MalT-like TPR region M662_06340 PF01063 Amino-transferase class IV M662_06345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M662_06345 PF00205 Thiamine pyrophosphate enzyme, central domain M662_06345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M662_06350 PF10369 Small subunit of acetolactate synthase M662_06350 PF01842 ACT domain M662_06355 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M662_06355 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M662_06360 PF00682 HMGL-like M662_06360 PF08502 LeuA allosteric (dimerisation) domain M662_06365 PF00180 Isocitrate/isopropylmalate dehydrogenase M662_06370 PF00330 Aconitase family (aconitate hydratase) M662_06375 PF00694 Aconitase C-terminal domain M662_06380 PF13291 ACT domain M662_06380 PF00291 Pyridoxal-phosphate dependent enzyme M662_06385 PF08386 TAP-like protein M662_06385 PF00561 alpha/beta hydrolase fold M662_06390 PF01032 FecCD transport family M662_06395 PF01032 FecCD transport family M662_06400 PF00005 ABC transporter M662_06405 PF01497 Periplasmic binding protein M662_06410 PF13411 MerR HTH family regulatory protein M662_06410 PF06445 GyrI-like small molecule binding domain M662_06430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M662_06430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M662_06445 PF16295 Tetracyclin repressor-like, C-terminal domain M662_06445 PF00440 Bacterial regulatory proteins, tetR family M662_06450 PF00175 Oxidoreductase NAD-binding domain M662_06450 PF00258 Flavodoxin M662_06450 PF00667 FAD binding domain M662_06450 PF00067 Cytochrome P450 M662_06455 PF00107 Zinc-binding dehydrogenase M662_06455 PF08240 Alcohol dehydrogenase GroES-like domain M662_06470 PF07486 Cell Wall Hydrolase M662_06495 PF00571 CBS domain M662_06495 PF03471 Transporter associated domain M662_06495 PF01595 Cyclin M transmembrane N-terminal domain M662_06500 PF00474 Sodium:solute symporter family M662_06505 PF09335 SNARE associated Golgi protein M662_06510 PF02673 Bacitracin resistance protein BacA M662_06515 PF13783 Domain of unknown function (DUF4177) M662_06535 PF00474 Sodium:solute symporter family M662_06545 PF07969 Amidohydrolase family M662_06550 PF01546 Peptidase family M20/M25/M40 M662_06550 PF07687 Peptidase dimerisation domain M662_06560 PF00583 Acetyltransferase (GNAT) family M662_06600 PF06276 Ferric iron reductase FhuF-like transporter M662_06600 PF04183 IucA / IucC family M662_06605 PF06276 Ferric iron reductase FhuF-like transporter M662_06605 PF04183 IucA / IucC family M662_06610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M662_06610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M662_06615 PF13411 MerR HTH family regulatory protein M662_06630 PF13673 Acetyltransferase (GNAT) domain M662_06635 PF08241 Methyltransferase domain M662_06710 PF06874 Firmicute fructose-1,6-bisphosphatase M662_06725 PF00583 Acetyltransferase (GNAT) family M662_06735 PF03473 MOSC domain M662_06735 PF03475 3-alpha domain M662_06740 PF04309 Glycerol-3-phosphate responsive antiterminator M662_06750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M662_06750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M662_06755 PF01565 FAD binding domain M662_06755 PF02913 FAD linked oxidases, C-terminal domain M662_06760 PF02028 BCCT, betaine/carnitine/choline family transporter M662_06785 PF13538 UvrD-like helicase C-terminal domain M662_06790 PF01965 DJ-1/PfpI family M662_06825 PF00005 ABC transporter M662_06850 PF13462 Thioredoxin M662_06865 PF07681 DoxX M662_06885 PF07070 SpoOM protein M662_06890 PF02687 FtsX-like permease family M662_06890 PF12704 MacB-like periplasmic core domain M662_06890 PF00005 ABC transporter M662_06915 PF01121 Dephospho-CoA kinase M662_06920 PF13302 Acetyltransferase (GNAT) domain M662_06925 PF10997 Alternate to MurJ M662_06930 PF13419 Haloacid dehalogenase-like hydrolase M662_06945 PF01497 Periplasmic binding protein M662_06950 PF01032 FecCD transport family M662_06955 PF01678 Diaminopimelate epimerase M662_06960 PF01894 Uncharacterised protein family UPF0047 M662_06965 PF04143 Sulphur transport M662_06975 PF13180 PDZ domain M662_06985 PF01593 Flavin containing amine oxidoreductase M662_06995 PF02535 ZIP Zinc transporter M662_07005 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M662_07005 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M662_07010 PF00115 Cytochrome C and Quinol oxidase polypeptide I M662_07015 PF00510 Cytochrome c oxidase subunit III M662_07020 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M662_07025 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M662_07035 PF00474 Sodium:solute symporter family M662_07045 PF00005 ABC transporter M662_07055 PF04055 Radical SAM superfamily M662_07055 PF08756 YfkB-like domain M662_07065 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M662_07070 PF00375 Sodium:dicarboxylate symporter family M662_07085 PF07690 Major Facilitator Superfamily M662_07090 PF00106 short chain dehydrogenase M662_07095 PF12146 Serine aminopeptidase, S33 M662_07100 PF09515 Thiamine transporter protein (Thia_YuaJ) M662_07125 PF13536 Putative multidrug resistance efflux transporter M662_07135 PF00293 NUDIX domain M662_07145 PF01638 HxlR-like helix-turn-helix M662_07150 PF00296 Luciferase-like monooxygenase M662_07155 PF03358 NADPH-dependent FMN reductase M662_07165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M662_07165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M662_07170 PF01022 Bacterial regulatory protein, arsR family M662_07175 PF05977 Transmembrane secretion effector M662_07180 PF02634 FdhD/NarQ family M662_07185 PF01568 Molydopterin dinucleotide binding domain M662_07185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M662_07185 PF00384 Molybdopterin oxidoreductase M662_07185 PF12838 4Fe-4S dicluster domain M662_07185 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M662_07190 PF07849 Protein of unknown function (DUF1641) M662_07200 PF00248 Aldo/keto reductase family M662_07205 PF01804 Penicillin amidase M662_07220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M662_07225 PF06271 RDD family M662_07230 PF04951 D-aminopeptidase M662_07235 PF00528 Binding-protein-dependent transport system inner membrane component M662_07240 PF12911 N-terminal TM domain of oligopeptide transport permease C M662_07240 PF00528 Binding-protein-dependent transport system inner membrane component M662_07245 PF00005 ABC transporter M662_07245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_07250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M662_07255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M662_07255 PF13378 Enolase C-terminal domain-like M662_07260 PF00877 NlpC/P60 family M662_07265 PF00005 ABC transporter M662_07265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M662_07275 PF00144 Beta-lactamase M662_07280 PF00202 Aminotransferase class-III M662_07285 PF00282 Pyridoxal-dependent decarboxylase conserved domain M662_07290 PF04183 IucA / IucC family M662_07290 PF06276 Ferric iron reductase FhuF-like transporter M662_07300 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M662_07305 PF06276 Ferric iron reductase FhuF-like transporter M662_07305 PF04183 IucA / IucC family M662_07310 PF13840 ACT domain M662_07310 PF00696 Amino acid kinase family M662_07350 PF04542 Sigma-70 region 2 M662_07350 PF08281 Sigma-70, region 4 M662_07395 PF00005 ABC transporter M662_07400 PF00072 Response regulator receiver domain M662_07400 PF04397 LytTr DNA-binding domain M662_07415 PF00069 Protein kinase domain M662_07440 PF02016 LD-carboxypeptidase N-terminal domain M662_07440 PF17676 LD-carboxypeptidase C-terminal domain M662_07455 PF13673 Acetyltransferase (GNAT) domain M662_07455 PF04229 GrpB protein M662_07470 PF17676 LD-carboxypeptidase C-terminal domain M662_07470 PF02016 LD-carboxypeptidase N-terminal domain M662_07500 PF00106 short chain dehydrogenase M662_07505 PF09278 MerR, DNA binding M662_07505 PF00376 MerR family regulatory protein M662_07520 PF00106 short chain dehydrogenase M662_07525 PF12833 Helix-turn-helix domain M662_07525 PF17853 GGDEF-like domain M662_07530 PF00356 Bacterial regulatory proteins, lacI family M662_07535 PF13416 Bacterial extracellular solute-binding protein M662_07540 PF00528 Binding-protein-dependent transport system inner membrane component M662_07545 PF00528 Binding-protein-dependent transport system inner membrane component M662_07550 PF00251 Glycosyl hydrolases family 32 N-terminal domain M662_07550 PF08244 Glycosyl hydrolases family 32 C terminal M662_07555 PF04854 Protein of unknown function, DUF624 M662_07560 PF08244 Glycosyl hydrolases family 32 C terminal M662_07560 PF00251 Glycosyl hydrolases family 32 N-terminal domain M662_07615 PF01432 Peptidase family M3 M662_07615 PF08439 Oligopeptidase F M662_07660 PF01966 HD domain M662_07700 PF01695 IstB-like ATP binding protein M662_07705 PF00665 Integrase core domain M662_07710 PF00874 PRD domain M662_07710 PF03123 CAT RNA binding domain M662_07715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M662_07715 PF00367 phosphotransferase system, EIIB M662_07715 PF02378 Phosphotransferase system, EIIC M662_07720 PF00232 Glycosyl hydrolase family 1 M662_07725 PF00581 Rhodanese-like domain M662_07725 PF00753 Metallo-beta-lactamase superfamily M662_07730 PF00578 AhpC/TSA family M662_07730 PF10417 C-terminal domain of 1-Cys peroxiredoxin M662_07745 PF06800 Sugar transport protein M662_07755 PF02652 L-lactate permease M662_07760 PF00392 Bacterial regulatory proteins, gntR family M662_07760 PF07729 FCD domain M662_07765 PF02754 Cysteine-rich domain M662_07770 PF02589 LUD domain M662_07770 PF11870 Domain of unknown function (DUF3390) M662_07770 PF13183 4Fe-4S dicluster domain M662_07775 PF02589 LUD domain M662_07780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M662_07820 PF01425 Amidase M662_07825 PF12833 Helix-turn-helix domain M662_07830 PF01494 FAD binding domain M662_07860 PF00356 Bacterial regulatory proteins, lacI family M662_07865 PF00294 pfkB family carbohydrate kinase M662_07870 PF05025 RbsD / FucU transport protein family M662_07875 PF00005 ABC transporter M662_07880 PF02653 Branched-chain amino acid transport system / permease component M662_07885 PF13407 Periplasmic binding protein domain M662_07895 PF01037 Lrp/AsnC ligand binding domain M662_07905 PF02824 TGS domain M662_07905 PF03129 Anticodon binding domain M662_07905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M662_07905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M662_07915 PF00881 Nitroreductase family M662_07935 PF00005 ABC transporter M662_07945 PF03193 RsgA GTPase M662_07955 PF14158 YndJ-like protein M662_07960 PF01209 ubiE/COQ5 methyltransferase family M662_07975 PF00120 Glutamine synthetase, catalytic domain M662_07975 PF03951 Glutamine synthetase, beta-Grasp domain M662_07985 PF01368 DHH family M662_07985 PF02833 DHHA2 domain M662_08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M662_08005 PF03466 LysR substrate binding domain M662_08010 PF04303 PrpF protein M662_08020 PF01544 CorA-like Mg2+ transporter protein M662_08030 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_08035 PF07690 Major Facilitator Superfamily M662_08050 PF01966 HD domain M662_08060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M662_08065 PF03453 MoeA N-terminal region (domain I and II) M662_08065 PF03454 MoeA C-terminal region (domain IV) M662_08065 PF00994 Probable molybdopterin binding domain M662_08070 PF06463 Molybdenum Cofactor Synthesis C M662_08070 PF04055 Radical SAM superfamily M662_08080 PF02386 Cation transport protein M662_08085 PF09680 Family of unknown function M662_08095 PF01593 Flavin containing amine oxidoreductase M662_08110 PF00005 ABC transporter M662_08115 PF00005 ABC transporter M662_08130 PF02875 Mur ligase family, glutamate ligase domain M662_08130 PF01225 Mur ligase family, catalytic domain M662_08130 PF08245 Mur ligase middle domain M662_08135 PF01593 Flavin containing amine oxidoreductase M662_08140 PF00535 Glycosyl transferase family 2 M662_08170 PF10502 Signal peptidase, peptidase S26 M662_08180 PF00155 Aminotransferase class I and II M662_08205 PF01584 CheW-like domain M662_08205 PF00072 Response regulator receiver domain M662_08215 PF14177 YkyB-like protein M662_08220 PF10518 TAT (twin-arginine translocation) pathway signal sequence M662_08220 PF00149 Calcineurin-like phosphoesterase M662_08230 PF03006 Haemolysin-III related M662_08240 PF07690 Major Facilitator Superfamily M662_08245 PF14602 Hexapeptide repeat of succinyl-transferase M662_08245 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal M662_08245 PF00132 Bacterial transferase hexapeptide (six repeats) M662_08250 PF07687 Peptidase dimerisation domain M662_08250 PF01546 Peptidase family M20/M25/M40 M662_08255 PF01595 Cyclin M transmembrane N-terminal domain M662_08255 PF03471 Transporter associated domain M662_08255 PF00571 CBS domain M662_08260 PF00924 Mechanosensitive ion channel M662_08265 PF00005 ABC transporter M662_08265 PF00664 ABC transporter transmembrane region M662_08270 PF00664 ABC transporter transmembrane region M662_08270 PF00005 ABC transporter M662_08275 PF01654 Cytochrome bd terminal oxidase subunit I M662_08280 PF02322 Cytochrome bd terminal oxidase subunit II M662_08285 PF02254 TrkA-N domain M662_08285 PF02080 TrkA-C domain M662_08325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M662_08325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M662_08325 PF00205 Thiamine pyrophosphate enzyme, central domain M662_08330 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M662_08330 PF00753 Metallo-beta-lactamase superfamily M662_08330 PF17770 Ribonuclease J C-terminal domain M662_08345 PF01327 Polypeptide deformylase M662_08355 PF00676 Dehydrogenase E1 component M662_08360 PF02780 Transketolase, C-terminal domain M662_08360 PF02779 Transketolase, pyrimidine binding domain M662_08365 PF00364 Biotin-requiring enzyme M662_08365 PF02817 e3 binding domain M662_08365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M662_08370 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_08370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M662_08375 PF00797 N-acetyltransferase M662_08395 PF02028 BCCT, betaine/carnitine/choline family transporter M662_08400 PF06081 Aromatic acid exporter family member 1 M662_08415 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M662_08415 PF01276 Orn/Lys/Arg decarboxylase, major domain M662_08420 PF03060 Nitronate monooxygenase M662_08425 PF05256 Uncharacterised protein family (UPF0223) M662_08430 PF06335 Protein of unknown function (DUF1054) M662_08440 PF00459 Inositol monophosphatase family M662_08450 PF14036 YlaH-like protein M662_08455 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) M662_08465 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M662_08475 PF04960 Glutaminase M662_08480 PF07408 Protein of unknown function (DUF1507) M662_08485 PF02785 Biotin carboxylase C-terminal domain M662_08485 PF00289 Biotin carboxylase, N-terminal domain M662_08485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M662_08485 PF00682 HMGL-like M662_08485 PF02436 Conserved carboxylase domain M662_08485 PF00364 Biotin-requiring enzyme M662_08495 PF00115 Cytochrome C and Quinol oxidase polypeptide I M662_08500 PF00510 Cytochrome c oxidase subunit III M662_08505 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M662_08510 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) M662_08525 PF01594 AI-2E family transporter M662_08530 PF08868 YugN-like family M662_08535 PF00571 CBS domain M662_08545 PF00188 Cysteine-rich secretory protein family M662_08545 PF14504 CAP-associated N-terminal M662_08555 PF06133 Control of competence regulator ComK, YlbF/YmcA M662_08565 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) M662_08585 PF01467 Cytidylyltransferase-like M662_08590 PF07670 Nucleoside recognition M662_08595 PF01734 Patatin-like phospholipase M662_08600 PF13180 PDZ domain M662_08600 PF05362 Lon protease (S16) C-terminal proteolytic domain M662_08605 PF05636 HIGH Nucleotidyl Transferase M662_08610 PF02620 Large ribosomal RNA subunit accumulation protein YceD M662_08615 PF01783 Ribosomal L32p protein family M662_08620 PF00378 Enoyl-CoA hydratase/isomerase M662_08630 PF13508 Acetyltransferase (GNAT) domain M662_08635 PF02558 Ketopantoate reductase PanE/ApbA M662_08635 PF08546 Ketopantoate reductase PanE/ApbA C terminal M662_08645 PF10079 Bacillithiol biosynthesis BshC M662_08650 PF02381 MraZ protein, putative antitoxin-like M662_08655 PF01795 MraW methylase family M662_08670 PF00905 Penicillin binding protein transpeptidase domain M662_08670 PF03793 PASTA domain M662_08670 PF03717 Penicillin-binding Protein dimerisation domain M662_08675 PF08245 Mur ligase middle domain M662_08675 PF02875 Mur ligase family, glutamate ligase domain M662_08675 PF01225 Mur ligase family, catalytic domain M662_08680 PF01225 Mur ligase family, catalytic domain M662_08680 PF08245 Mur ligase middle domain M662_08680 PF02875 Mur ligase family, glutamate ligase domain M662_08685 PF00953 Glycosyl transferase family 4 M662_08690 PF08245 Mur ligase middle domain M662_08690 PF02875 Mur ligase family, glutamate ligase domain M662_08695 PF01098 Cell cycle protein M662_08700 PF08478 POTRA domain, FtsQ-type M662_08705 PF02491 SHS2 domain inserted in FTSA M662_08710 PF12327 FtsZ family, C-terminal domain M662_08710 PF00091 Tubulin/FtsZ family, GTPase domain M662_08715 PF03419 Sporulation factor SpoIIGA M662_08720 PF04545 Sigma-70, region 4 M662_08720 PF04542 Sigma-70 region 2 M662_08725 PF04545 Sigma-70, region 4 M662_08725 PF04539 Sigma-70 region 3 M662_08725 PF04542 Sigma-70 region 2 M662_08730 PF05239 PRC-barrel domain M662_08740 PF01168 Alanine racemase, N-terminal domain M662_08745 PF04472 Cell division protein SepF M662_08750 PF02325 YGGT family M662_08755 PF01479 S4 domain M662_08755 PF17774 Putative RNA-binding domain in YlmH M662_08760 PF05103 DivIVA protein M662_08765 PF01252 Signal peptidase (SPase) II M662_08770 PF01479 S4 domain M662_08770 PF00849 RNA pseudouridylate synthase M662_08775 PF00156 Phosphoribosyl transferase domain M662_08780 PF00860 Permease family M662_08785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M662_08785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M662_08790 PF01979 Amidohydrolase family M662_08795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M662_08795 PF00117 Glutamine amidotransferase class-I M662_08800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M662_08800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M662_08800 PF02142 MGS-like domain M662_08805 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B M662_08805 PF00175 Oxidoreductase NAD-binding domain M662_08810 PF01180 Dihydroorotate dehydrogenase M662_08815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M662_08820 PF00156 Phosphoribosyl transferase domain M662_08835 PF00092 von Willebrand factor type A domain M662_08840 PF05670 NFACT protein RNA binding domain M662_08845 PF08340 Domain of unknown function (DUF1732) M662_08845 PF03755 YicC-like family, N-terminal region M662_08850 PF04025 Domain of unknown function (DUF370) M662_08855 PF00625 Guanylate kinase M662_08860 PF01192 RNA polymerase Rpb6 M662_08865 PF04127 DNA / pantothenate metabolism flavoprotein M662_08865 PF02441 Flavoprotein M662_08870 PF00271 Helicase conserved C-terminal domain M662_08870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M662_08870 PF04851 Type III restriction enzyme, res subunit M662_08870 PF17764 3′ DNA-binding domain (3′BD) M662_08870 PF18074 Primosomal protein N C-terminal domain M662_08875 PF02911 Formyl transferase, C-terminal domain M662_08875 PF00551 Formyl transferase M662_08880 PF01189 16S rRNA methyltransferase RsmB/F M662_08880 PF01029 NusB family M662_08890 PF00069 Protein kinase domain M662_08890 PF03793 PASTA domain M662_08895 PF16745 RsgA N-terminal domain M662_08895 PF03193 RsgA GTPase M662_08900 PF00834 Ribulose-phosphate 3 epimerase family M662_08905 PF04263 Thiamin pyrophosphokinase, catalytic domain M662_08905 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain M662_08910 PF08183 Stage V sporulation protein family M662_08915 PF00830 Ribosomal L28 family M662_08920 PF03780 Asp23 family, cell envelope-related function M662_08925 PF13684 Dihydroxyacetone kinase family M662_08925 PF02734 DAK2 domain M662_08930 PF01925 Sulfite exporter TauE/SafE M662_08935 PF01507 Phosphoadenosine phosphosulfate reductase family M662_08940 PF14306 PUA-like domain M662_08940 PF01747 ATP-sulfurylase M662_08950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M662_08955 PF01903 CbiX M662_08960 PF14824 Sirohaem biosynthesis protein central M662_08970 PF00258 Flavodoxin M662_08970 PF00667 FAD binding domain M662_08970 PF00175 Oxidoreductase NAD-binding domain M662_08975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M662_08975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M662_08990 PF00860 Permease family M662_08995 PF01842 ACT domain M662_08995 PF03315 Serine dehydratase beta chain M662_09000 PF03313 Serine dehydratase alpha chain M662_09005 PF00270 DEAD/DEAH box helicase M662_09005 PF17191 RecG wedge domain M662_09005 PF00271 Helicase conserved C-terminal domain M662_09010 PF03061 Thioesterase superfamily M662_09015 PF02504 Fatty acid synthesis protein M662_09020 PF00698 Acyl transferase domain M662_09030 PF00550 Phosphopantetheine attachment site M662_09035 PF00035 Double-stranded RNA binding motif M662_09035 PF14622 Ribonuclease-III-like M662_09040 PF06569 Protein of unknown function (DUF1128) M662_09045 PF02463 RecF/RecN/SMC N terminal domain M662_09045 PF06470 SMC proteins Flexible Hinge Domain M662_09050 PF00448 SRP54-type protein, GTPase domain M662_09050 PF02881 SRP54-type protein, helical bundle domain M662_09055 PF04297 Putative helix-turn-helix protein, YlxM / p13 like M662_09060 PF00448 SRP54-type protein, GTPase domain M662_09060 PF02881 SRP54-type protein, helical bundle domain M662_09060 PF02978 Signal peptide binding domain M662_09065 PF00886 Ribosomal protein S16 M662_09080 PF05239 PRC-barrel domain M662_09080 PF01782 RimM N-terminal domain M662_09085 PF01746 tRNA (Guanine-1)-methyltransferase M662_09090 PF01245 Ribosomal protein L19 M662_09095 PF10502 Signal peptidase, peptidase S26 M662_09100 PF01926 50S ribosome-binding GTPase M662_09105 PF01351 Ribonuclease HII M662_09120 PF00549 CoA-ligase M662_09120 PF08442 ATP-grasp domain M662_09125 PF00549 CoA-ligase M662_09125 PF02629 CoA binding domain M662_09130 PF02481 DNA recombination-mediator protein A M662_09135 PF01396 Topoisomerase DNA binding C4 zinc finger M662_09135 PF01751 Toprim domain M662_09135 PF01131 DNA topoisomerase M662_09140 PF00589 Phage integrase family M662_09140 PF02899 Phage integrase, N-terminal SAM-like domain M662_09145 PF00227 Proteasome subunit M662_09150 PF10431 C-terminal, D2-small domain, of ClpB protein M662_09150 PF07724 AAA domain (Cdc48 subfamily) M662_09150 PF00004 ATPase family associated with various cellular activities (AAA) M662_09155 PF06018 CodY GAF-like domain M662_09155 PF08222 CodY helix-turn-helix domain M662_09165 PF00460 Flagella basal body rod protein M662_09170 PF00460 Flagella basal body rod protein M662_09170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M662_09175 PF02049 Flagellar hook-basal body complex protein FliE M662_09180 PF01514 Secretory protein of YscJ/FliF family M662_09180 PF08345 Flagellar M-ring protein C-terminal M662_09185 PF14841 FliG middle domain M662_09185 PF01706 FliG C-terminal domain M662_09185 PF14842 FliG N-terminal domain M662_09195 PF18269 T3SS EscN ATPase C-terminal domain M662_09195 PF02874 ATP synthase alpha/beta family, beta-barrel domain M662_09195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M662_09215 PF03963 Flagellar hook capping protein - N-terminal region M662_09225 PF00460 Flagella basal body rod protein M662_09225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M662_09230 PF06289 Flagellar and Swarming motility proteins M662_09240 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M662_09240 PF02154 Flagellar motor switch protein FliM M662_09245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M662_09245 PF04509 CheC-like family M662_09250 PF00072 Response regulator receiver domain M662_09255 PF04347 Flagellar biosynthesis protein, FliO M662_09260 PF00813 FliP family M662_09265 PF01313 Bacterial export proteins, family 3 M662_09270 PF01311 Bacterial export proteins, family 1 M662_09275 PF01312 FlhB HrpN YscU SpaS Family M662_09280 PF00771 FHIPEP family M662_09285 PF00448 SRP54-type protein, GTPase domain M662_09290 PF10609 NUBPL iron-transfer P-loop NTPase M662_09295 PF00072 Response regulator receiver domain M662_09295 PF01339 CheB methylesterase M662_09300 PF01627 Hpt domain M662_09300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_09300 PF02895 Signal transducing histidine kinase, homodimeric domain M662_09300 PF01584 CheW-like domain M662_09300 PF07194 P2 response regulator binding domain M662_09305 PF01584 CheW-like domain M662_09310 PF04509 CheC-like family M662_09315 PF03975 CheD chemotactic sensory transduction M662_09320 PF04542 Sigma-70 region 2 M662_09320 PF04539 Sigma-70 region 3 M662_09320 PF04545 Sigma-70, region 4 M662_09330 PF00318 Ribosomal protein S2 M662_09335 PF00889 Elongation factor TS M662_09340 PF00696 Amino acid kinase family M662_09345 PF01765 Ribosome recycling factor M662_09350 PF01255 Putative undecaprenyl diphosphate synthase M662_09360 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M662_09360 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M662_09360 PF13288 DXP reductoisomerase C-terminal domain M662_09365 PF02163 Peptidase family M50 M662_09365 PF17820 PDZ domain M662_09370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M662_09370 PF03129 Anticodon binding domain M662_09370 PF04073 Aminoacyl-tRNA editing domain M662_09375 PF14480 DNA polymerase III polC-type N-terminus I M662_09375 PF07733 Bacterial DNA polymerase III alpha NTPase domain M662_09375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M662_09375 PF14579 Helix-hairpin-helix motif M662_09375 PF02811 PHP domain M662_09375 PF00929 Exonuclease M662_09375 PF01336 OB-fold nucleic acid binding domain M662_09375 PF11490 DNA polymerase III polC-type N-terminus II M662_09380 PF02576 RimP N-terminal domain M662_09380 PF17384 RimP C-terminal SH3 domain M662_09385 PF13184 NusA-like KH domain M662_09385 PF00575 S1 RNA binding domain M662_09385 PF08529 NusA N-terminal domain M662_09390 PF04296 Protein of unknown function (DUF448) M662_09395 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M662_09400 PF04760 Translation initiation factor IF-2, N-terminal region M662_09400 PF11987 Translation-initiation factor 2 M662_09400 PF00009 Elongation factor Tu GTP binding domain M662_09405 PF04456 Protein of unknown function (DUF503) M662_09410 PF02033 Ribosome-binding factor A M662_09415 PF16198 tRNA pseudouridylate synthase B C-terminal domain M662_09415 PF01509 TruB family pseudouridylate synthase (N terminal domain) M662_09420 PF01687 Riboflavin kinase M662_09420 PF06574 FAD synthetase M662_09425 PF00312 Ribosomal protein S15 M662_09430 PF00013 KH domain M662_09430 PF01138 3' exoribonuclease family, domain 1 M662_09430 PF00575 S1 RNA binding domain M662_09430 PF03725 3' exoribonuclease family, domain 2 M662_09430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M662_09435 PF01522 Polysaccharide deacetylase M662_09445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M662_09445 PF16924 Dipicolinate synthase subunit A N-terminal domain M662_09450 PF02441 Flavoprotein M662_09455 PF02774 Semialdehyde dehydrogenase, dimerisation domain M662_09455 PF01118 Semialdehyde dehydrogenase, NAD binding domain M662_09460 PF13840 ACT domain M662_09460 PF00696 Amino acid kinase family M662_09465 PF00701 Dihydrodipicolinate synthetase family M662_09470 PF00574 Clp protease M662_09475 PF14035 YlzJ-like protein M662_09480 PF01580 FtsK/SpoIIIE family M662_09480 PF09397 Ftsk gamma domain M662_09480 PF17854 FtsK alpha domain M662_09485 PF07702 UTRA domain M662_09485 PF00392 Bacterial regulatory proteins, gntR family M662_09510 PF05193 Peptidase M16 inactive domain M662_09515 PF00675 Insulinase (Peptidase family M16) M662_09515 PF05193 Peptidase M16 inactive domain M662_09525 PF11588 Protein of unknown function (DUF3243) M662_09530 PF11868 Protein of unknown function (DUF3388) M662_09535 PF13464 Domain of unknown function (DUF4115) M662_09540 PF01066 CDP-alcohol phosphatidyltransferase M662_09545 PF02464 Competence-damaged protein M662_09545 PF18146 Damage-inducible protein CinA KH domain M662_09545 PF00994 Probable molybdopterin binding domain M662_09550 PF00154 recA bacterial DNA recombination protein M662_09555 PF01966 HD domain M662_09555 PF00013 KH domain M662_09555 PF12072 Domain of unknown function (DUF3552) M662_09560 PF13277 YmdB-like protein M662_09565 PF04232 Stage V sporulation protein S (SpoVS) M662_09570 PF08240 Alcohol dehydrogenase GroES-like domain M662_09570 PF00107 Zinc-binding dehydrogenase M662_09575 PF00155 Aminotransferase class I and II M662_09580 PF00919 Uncharacterized protein family UPF0004 M662_09580 PF01938 TRAM domain M662_09580 PF04055 Radical SAM superfamily M662_09585 PF06133 Control of competence regulator ComK, YlbF/YmcA M662_09590 PF10628 Outer spore coat protein E (CotE) M662_09595 PF05188 MutS domain II M662_09595 PF05192 MutS domain III M662_09595 PF01624 MutS domain I M662_09595 PF00488 MutS domain V M662_09595 PF05190 MutS family domain IV M662_09600 PF08676 MutL C terminal dimerisation domain M662_09600 PF01119 DNA mismatch repair protein, C-terminal domain M662_09605 PF01381 Helix-turn-helix M662_09615 PF17209 Hfq protein M662_09620 PF00004 ATPase family associated with various cellular activities (AAA) M662_09620 PF17866 AAA lid domain M662_09625 PF01926 50S ribosome-binding GTPase M662_09625 PF13167 GTP-binding GTPase N-terminal M662_09625 PF16360 GTP-binding GTPase Middle Region M662_09630 PF06838 Methionine gamma-lyase M662_09635 PF13411 MerR HTH family regulatory protein M662_09640 PF03951 Glutamine synthetase, beta-Grasp domain M662_09640 PF00120 Glutamine synthetase, catalytic domain M662_09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_09650 PF08447 PAS fold M662_09650 PF13426 PAS domain M662_09655 PF05036 Sporulation related domain M662_09655 PF01520 N-acetylmuramoyl-L-alanine amidase M662_09665 PF00717 Peptidase S24-like M662_09665 PF01726 LexA DNA binding domain M662_09670 PF00239 Resolvase, N terminal domain M662_09675 PF05979 Bacterial protein of unknown function (DUF896) M662_09680 PF02779 Transketolase, pyrimidine binding domain M662_09680 PF00456 Transketolase, thiamine diphosphate binding domain M662_09680 PF02780 Transketolase, C-terminal domain M662_09690 PF03672 Uncharacterised protein family (UPF0154) M662_09695 PF02683 Cytochrome C biogenesis protein transmembrane region M662_09700 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M662_09705 PF07301 Protein of unknown function (DUF1453) M662_09710 PF11084 Protein of unknown function (DUF2621) M662_09715 PF00330 Aconitase family (aconitate hydratase) M662_09715 PF00694 Aconitase C-terminal domain M662_09720 PF00578 AhpC/TSA family M662_09735 PF00004 ATPase family associated with various cellular activities (AAA) M662_09735 PF17866 AAA lid domain M662_09740 PF03061 Thioesterase superfamily M662_09755 PF01809 Putative membrane protein insertion efficiency factor M662_09760 PF02649 Type I GTP cyclohydrolase folE2 M662_09765 PF02660 Glycerol-3-phosphate acyltransferase M662_09770 PF00571 CBS domain M662_09770 PF00005 ABC transporter M662_09775 PF00528 Binding-protein-dependent transport system inner membrane component M662_09780 PF13380 CoA binding domain M662_09785 PF00986 DNA gyrase B subunit, carboxyl terminus M662_09785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_09785 PF01751 Toprim domain M662_09785 PF00204 DNA gyrase B M662_09790 PF03989 DNA gyrase C-terminal domain, beta-propeller M662_09790 PF00521 DNA gyrase/topoisomerase IV, subunit A M662_09800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_09800 PF02770 Acyl-CoA dehydrogenase, middle domain M662_09800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_09805 PF13193 AMP-binding enzyme C-terminal domain M662_09805 PF00501 AMP-binding enzyme M662_09810 PF02785 Biotin carboxylase C-terminal domain M662_09810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M662_09810 PF00289 Biotin carboxylase, N-terminal domain M662_09815 PF00364 Biotin-requiring enzyme M662_09820 PF00682 HMGL-like M662_09825 PF00378 Enoyl-CoA hydratase/isomerase M662_09830 PF01039 Carboxyl transferase domain M662_09835 PF13193 AMP-binding enzyme C-terminal domain M662_09835 PF00501 AMP-binding enzyme M662_09835 PF16177 Acetyl-coenzyme A synthetase N-terminus M662_09840 PF01145 SPFH domain / Band 7 family M662_09840 PF15975 Flotillin M662_09845 PF01370 NAD dependent epimerase/dehydratase family M662_09850 PF00534 Glycosyl transferases group 1 M662_09850 PF13439 Glycosyltransferase Family 4 M662_09860 PF01336 OB-fold nucleic acid binding domain M662_09860 PF00929 Exonuclease M662_09860 PF14579 Helix-hairpin-helix motif M662_09860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M662_09860 PF07733 Bacterial DNA polymerase III alpha NTPase domain M662_09860 PF11490 DNA polymerase III polC-type N-terminus II M662_09860 PF02811 PHP domain M662_09865 PF00881 Nitroreductase family M662_09870 PF17783 CvfB-like winged helix domain M662_09870 PF13509 S1 domain M662_09880 PF00296 Luciferase-like monooxygenase M662_09890 PF00107 Zinc-binding dehydrogenase M662_09890 PF08240 Alcohol dehydrogenase GroES-like domain M662_09895 PF06725 3D domain M662_09895 PF01476 LysM domain M662_09900 PF12848 ABC transporter M662_09900 PF00005 ABC transporter M662_09910 PF00313 'Cold-shock' DNA-binding domain M662_09915 PF00080 Copper/zinc superoxide dismutase (SODC) M662_09920 PF00350 Dynamin family M662_09935 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like M662_09940 PF03576 Peptidase family S58 M662_09945 PF00708 Acylphosphatase M662_09950 PF00106 short chain dehydrogenase M662_09955 PF00037 4Fe-4S binding domain M662_09970 PF01738 Dienelactone hydrolase family M662_09975 PF05145 Transition state regulatory protein AbrB M662_09980 PF00583 Acetyltransferase (GNAT) family M662_09990 PF01641 SelR domain M662_09990 PF01625 Peptide methionine sulfoxide reductase M662_10000 PF03167 Uracil DNA glycosylase superfamily M662_10005 PF13476 AAA domain M662_10010 PF00149 Calcineurin-like phosphoesterase M662_10010 PF12320 Type 5 capsule protein repressor C-terminal domain M662_10015 PF06855 YozE SAM-like fold M662_10020 PF00902 Sec-independent protein translocase protein (TatC) M662_10025 PF02416 mttA/Hcf106 family M662_10030 PF02416 mttA/Hcf106 family M662_10035 PF12804 MobA-like NTP transferase domain M662_10040 PF00186 Dihydrofolate reductase M662_10045 PF00303 Thymidylate synthase M662_10050 PF01966 HD domain M662_10055 PF01904 Protein of unknown function DUF72 M662_10060 PF01268 Formate--tetrahydrofolate ligase M662_10065 PF00313 'Cold-shock' DNA-binding domain M662_10070 PF02592 Putative vitamin uptake transporter M662_10075 PF00075 RNase H M662_10085 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M662_10090 PF02797 Chalcone and stilbene synthases, C-terminal domain M662_10090 PF00195 Chalcone and stilbene synthases, N-terminal domain M662_10100 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M662_10105 PF01170 Putative RNA methylase family UPF0020 M662_10105 PF02926 THUMP domain M662_10115 PF05103 DivIVA protein M662_10120 PF06908 YspA SLOG family M662_10130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M662_10135 PF00873 AcrB/AcrD/AcrF family M662_10150 PF03838 Recombination protein U M662_10155 PF00912 Transglycosylase M662_10155 PF00905 Penicillin binding protein transpeptidase domain M662_10160 PF10576 Iron-sulfur binding domain of endonuclease III M662_10160 PF00633 Helix-hairpin-helix motif M662_10160 PF00730 HhH-GPD superfamily base excision DNA repair protein M662_10165 PF07261 Replication initiation and membrane attachment M662_10170 PF01336 OB-fold nucleic acid binding domain M662_10170 PF00152 tRNA synthetases class II (D, K and N) M662_10175 PF00155 Aminotransferase class I and II M662_10185 PF14084 Protein of unknown function (DUF4264) M662_10190 PF04851 Type III restriction enzyme, res subunit M662_10190 PF13307 Helicase C-terminal domain M662_10190 PF00929 Exonuclease M662_10195 PF02261 Aspartate decarboxylase M662_10200 PF02569 Pantoate-beta-alanine ligase M662_10205 PF02548 Ketopantoate hydroxymethyltransferase M662_10210 PF08279 HTH domain M662_10210 PF02237 Biotin protein ligase C terminal domain M662_10210 PF03099 Biotin/lipoate A/B protein ligase family M662_10215 PF13735 tRNA nucleotidyltransferase domain 2 putative M662_10215 PF12627 Probable RNA and SrmB- binding site of polymerase A M662_10215 PF01743 Poly A polymerase head domain M662_10220 PF00534 Glycosyl transferases group 1 M662_10220 PF13439 Glycosyltransferase Family 4 M662_10225 PF02142 MGS-like domain M662_10230 PF01113 Dihydrodipicolinate reductase, N-terminus M662_10230 PF05173 Dihydrodipicolinate reductase, C-terminus M662_10235 PF03819 MazG nucleotide pyrophosphohydrolase domain M662_10240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M662_10240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M662_10245 PF04298 Putative neutral zinc metallopeptidase M662_10255 PF07187 Protein of unknown function (DUF1405) M662_10260 PF00032 Cytochrome b(C-terminal)/b6/petD M662_10260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M662_10265 PF00033 Cytochrome b/b6/petB M662_10270 PF00355 Rieske [2Fe-2S] domain M662_10280 PF08858 IDEAL domain M662_10280 PF08864 UPF0302 domain M662_10295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M662_10300 PF02153 Prephenate dehydrogenase M662_10300 PF01842 ACT domain M662_10305 PF00155 Aminotransferase class I and II M662_10310 PF07736 Chorismate mutase type I M662_10315 PF01761 3-dehydroquinate synthase M662_10320 PF01264 Chorismate synthase M662_10325 PF01739 CheR methyltransferase, SAM binding domain M662_10325 PF03705 CheR methyltransferase, all-alpha domain M662_10330 PF00334 Nucleoside diphosphate kinase M662_10335 PF00348 Polyprenyl synthetase M662_10340 PF01209 ubiE/COQ5 methyltransferase family M662_10345 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 M662_10350 PF02081 Tryptophan RNA-binding attenuator protein M662_10355 PF00216 Bacterial DNA-binding protein M662_10360 PF09547 Stage IV sporulation protein A (spore_IV_A) M662_10380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M662_10380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M662_10385 PF01926 50S ribosome-binding GTPase M662_10385 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M662_10395 PF14045 YIEGIA protein M662_10405 PF01070 FMN-dependent dehydrogenase M662_10410 PF00575 S1 RNA binding domain M662_10415 PF01553 Acyltransferase M662_10420 PF02224 Cytidylate kinase M662_10425 PF07238 PilZ domain M662_10425 PF12945 Flagellar protein YcgR M662_10430 PF14620 YpeB sporulation M662_10430 PF03413 Peptidase propeptide and YPEB domain M662_10435 PF01471 Putative peptidoglycan binding domain M662_10435 PF07486 Cell Wall Hydrolase M662_10440 PF13367 PrsW family intramembrane metalloprotease M662_10445 PF17763 Glutaminase/Asparaginase C-terminal domain M662_10445 PF00710 Asparaginase, N-terminal M662_10455 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M662_10455 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M662_10460 PF01820 D-ala D-ala ligase N-terminus M662_10460 PF07478 D-ala D-ala ligase C-terminus M662_10465 PF05389 Negative regulator of genetic competence (MecA) M662_10470 PF13411 MerR HTH family regulatory protein M662_10475 PF00149 Calcineurin-like phosphoesterase M662_10485 PF12652 CotJB protein M662_10490 PF05067 Manganese containing catalase M662_10500 PF02517 CPBP intramembrane metalloprotease M662_10505 PF00271 Helicase conserved C-terminal domain M662_10505 PF00270 DEAD/DEAH box helicase M662_10510 PF14493 Helix-turn-helix domain M662_10530 PF08281 Sigma-70, region 4 M662_10530 PF04542 Sigma-70 region 2 M662_10545 PF00672 HAMP domain M662_10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_10545 PF18698 Histidine kinase sensor domain M662_10545 PF00512 His Kinase A (phospho-acceptor) domain M662_10545 PF00989 PAS fold M662_10550 PF00486 Transcriptional regulatory protein, C terminal M662_10550 PF00072 Response regulator receiver domain M662_10555 PF01578 Cytochrome C assembly protein M662_10560 PF05140 ResB-like family M662_10565 PF00578 AhpC/TSA family M662_10570 PF00849 RNA pseudouridylate synthase M662_10570 PF01479 S4 domain M662_10575 PF07670 Nucleoside recognition M662_10580 PF07670 Nucleoside recognition M662_10585 PF07943 Penicillin-binding protein 5, C-terminal domain M662_10585 PF00768 D-alanyl-D-alanine carboxypeptidase M662_10590 PF04079 Segregation and condensation complex subunit ScpB M662_10595 PF02616 Segregation and condensation protein ScpA M662_10600 PF03745 Domain of unknown function (DUF309) M662_10605 PF00583 Acetyltransferase (GNAT) family M662_10615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M662_10620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M662_10620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M662_10625 PF03323 Bacillus/Clostridium GerA spore germination protein M662_10630 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M662_10635 PF07451 Stage V sporulation protein AD (SpoVAD) M662_10640 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M662_10645 PF13782 Stage V sporulation protein AB M662_10650 PF12164 Stage V sporulation protein AA M662_10655 PF04542 Sigma-70 region 2 M662_10655 PF04545 Sigma-70, region 4 M662_10655 PF04539 Sigma-70 region 3 M662_10660 PF13581 Histidine kinase-like ATPase domain M662_10665 PF01740 STAS domain M662_10670 PF00768 D-alanyl-D-alanine carboxypeptidase M662_10670 PF07943 Penicillin-binding protein 5, C-terminal domain M662_10675 PF00591 Glycosyl transferase family, a/b domain M662_10675 PF02885 Glycosyl transferase family, helical bundle domain M662_10675 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M662_10680 PF01048 Phosphorylase superfamily M662_10685 PF01676 Metalloenzyme superfamily M662_10690 PF02899 Phage integrase, N-terminal SAM-like domain M662_10690 PF00589 Phage integrase family M662_10695 PF14004 Protein of unknown function (DUF4227) M662_10700 PF01475 Ferric uptake regulator family M662_10705 PF01944 Stage II sporulation protein M M662_10715 PF00293 NUDIX domain M662_10720 PF00248 Aldo/keto reductase family M662_10725 PF01244 Membrane dipeptidase (Peptidase family M19) M662_10735 PF01266 FAD dependent oxidoreductase M662_10740 PF13580 SIS domain M662_10745 PF00392 Bacterial regulatory proteins, gntR family M662_10745 PF07702 UTRA domain M662_10750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M662_10755 PF01979 Amidohydrolase family M662_10760 PF02378 Phosphotransferase system, EIIC M662_10760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M662_10760 PF00367 phosphotransferase system, EIIB M662_10765 PF01225 Mur ligase family, catalytic domain M662_10765 PF08245 Mur ligase middle domain M662_10765 PF02875 Mur ligase family, glutamate ligase domain M662_10790 PF00106 short chain dehydrogenase M662_10805 PF00583 Acetyltransferase (GNAT) family M662_10810 PF10388 EAL-domain associated signalling protein domain M662_10810 PF00563 EAL domain M662_10830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M662_10840 PF03480 Bacterial extracellular solute-binding protein, family 7 M662_10845 PF01081 KDPG and KHG aldolase M662_10850 PF01380 SIS domain M662_10855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M662_10860 PF00294 pfkB family carbohydrate kinase M662_10865 PF00356 Bacterial regulatory proteins, lacI family M662_10870 PF04238 Protein of unknown function (DUF420) M662_10885 PF00583 Acetyltransferase (GNAT) family M662_10895 PF07615 YKOF-related Family M662_10900 PF09819 ABC-type cobalt transport system, permease component M662_10905 PF00005 ABC transporter M662_10910 PF02361 Cobalt transport protein M662_10925 PF07683 Cobalamin synthesis protein cobW C-terminal domain M662_10925 PF02492 CobW/HypB/UreG, nucleotide-binding domain M662_10935 PF00253 Ribosomal protein S14p/S29e M662_10940 PF13302 Acetyltransferase (GNAT) domain M662_10950 PF01098 Cell cycle protein M662_10955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M662_10960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M662_10965 PF13472 GDSL-like Lipase/Acylhydrolase family M662_10980 PF03435 Saccharopine dehydrogenase NADP binding domain M662_10980 PF16653 Saccharopine dehydrogenase C-terminal domain M662_10985 PF00171 Aldehyde dehydrogenase family M662_10990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M662_10990 PF00205 Thiamine pyrophosphate enzyme, central domain M662_10990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M662_10995 PF00155 Aminotransferase class I and II M662_11000 PF02515 CoA-transferase family III M662_11005 PF02770 Acyl-CoA dehydrogenase, middle domain M662_11005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_11005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_11010 PF03851 UV-endonuclease UvdE M662_11035 PF04239 Protein of unknown function (DUF421) M662_11045 PF00478 IMP dehydrogenase / GMP reductase domain M662_11050 PF07694 5TMR of 5TMR-LYT M662_11050 PF00990 Diguanylate cyclase, GGDEF domain M662_11060 PF00535 Glycosyl transferase family 2 M662_11070 PF00465 Iron-containing alcohol dehydrogenase M662_11100 PF02080 TrkA-C domain M662_11100 PF03471 Transporter associated domain M662_11100 PF00999 Sodium/hydrogen exchanger family M662_11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_11110 PF00005 ABC transporter M662_11110 PF12848 ABC transporter M662_11115 PF00881 Nitroreductase family M662_11120 PF13537 Glutamine amidotransferase domain M662_11120 PF00733 Asparagine synthase M662_11135 PF03741 Integral membrane protein TerC family M662_11140 PF00232 Glycosyl hydrolase family 1 M662_11145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M662_11145 PF00356 Bacterial regulatory proteins, lacI family M662_11150 PF00528 Binding-protein-dependent transport system inner membrane component M662_11155 PF00528 Binding-protein-dependent transport system inner membrane component M662_11170 PF00884 Sulfatase M662_11175 PF03060 Nitronate monooxygenase M662_11190 PF06445 GyrI-like small molecule binding domain M662_11190 PF12833 Helix-turn-helix domain M662_11195 PF01040 UbiA prenyltransferase family M662_11205 PF07556 Protein of unknown function (DUF1538) M662_11210 PF07556 Protein of unknown function (DUF1538) M662_11220 PF07690 Major Facilitator Superfamily M662_11225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M662_11230 PF13302 Acetyltransferase (GNAT) domain M662_11235 PF00899 ThiF family M662_11240 PF05690 Thiazole biosynthesis protein ThiG M662_11250 PF01266 FAD dependent oxidoreductase M662_11255 PF02581 Thiamine monophosphate synthase M662_11260 PF00296 Luciferase-like monooxygenase M662_11265 PF00474 Sodium:solute symporter family M662_11275 PF07662 Na+ dependent nucleoside transporter C-terminus M662_11275 PF01773 Na+ dependent nucleoside transporter N-terminus M662_11280 PF01156 Inosine-uridine preferring nucleoside hydrolase M662_11290 PF01232 Mannitol dehydrogenase Rossmann domain M662_11290 PF08125 Mannitol dehydrogenase C-terminal domain M662_11295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M662_11295 PF05043 Mga helix-turn-helix domain M662_11295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M662_11295 PF00874 PRD domain M662_11295 PF08279 HTH domain M662_11300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M662_11300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M662_11300 PF02378 Phosphotransferase system, EIIC M662_11305 PF03390 2-hydroxycarboxylate transporter family M662_11310 PF00072 Response regulator receiver domain M662_11315 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M662_11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_11315 PF00989 PAS fold M662_11315 PF17203 Single cache domain 3 M662_11320 PF02126 Phosphotriesterase family M662_11325 PF02811 PHP domain M662_11325 PF14579 Helix-hairpin-helix motif M662_11325 PF11490 DNA polymerase III polC-type N-terminus II M662_11325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M662_11325 PF07733 Bacterial DNA polymerase III alpha NTPase domain M662_11325 PF00929 Exonuclease M662_11335 PF00909 Ammonium Transporter Family M662_11340 PF02028 BCCT, betaine/carnitine/choline family transporter M662_11355 PF01751 Toprim domain M662_11355 PF01131 DNA topoisomerase M662_11365 PF10720 Protein of unknown function (DUF2515) M662_11375 PF08241 Methyltransferase domain M662_11385 PF00860 Permease family M662_11400 PF11799 impB/mucB/samB family C-terminal domain M662_11400 PF11798 IMS family HHH motif M662_11400 PF00817 impB/mucB/samB family M662_11420 PF00672 HAMP domain M662_11420 PF00512 His Kinase A (phospho-acceptor) domain M662_11420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_11425 PF00072 Response regulator receiver domain M662_11425 PF00486 Transcriptional regulatory protein, C terminal M662_11430 PF00106 short chain dehydrogenase M662_11435 PF00753 Metallo-beta-lactamase superfamily M662_11440 PF03806 AbgT putative transporter family M662_11445 PF01546 Peptidase family M20/M25/M40 M662_11450 PF03009 Glycerophosphoryl diester phosphodiesterase family M662_11455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M662_11460 PF12706 Beta-lactamase superfamily domain M662_11460 PF00753 Metallo-beta-lactamase superfamily M662_11465 PF00171 Aldehyde dehydrogenase family M662_11475 PF00005 ABC transporter M662_11485 PF08179 Small acid-soluble spore protein P family M662_11490 PF14140 YpzI-like protein M662_11495 PF00817 impB/mucB/samB family M662_11495 PF11798 IMS family HHH motif M662_11495 PF11799 impB/mucB/samB family C-terminal domain M662_11500 PF01546 Peptidase family M20/M25/M40 M662_11500 PF07687 Peptidase dimerisation domain M662_11505 PF01039 Carboxyl transferase domain M662_11510 PF02310 B12 binding domain M662_11515 PF02310 B12 binding domain M662_11515 PF01642 Methylmalonyl-CoA mutase M662_11525 PF03734 L,D-transpeptidase catalytic domain M662_11530 PF11728 Putative aromatic acid exporter C-terminal domain M662_11530 PF06081 Aromatic acid exporter family member 1 M662_11535 PF06491 Disulphide isomerase M662_11540 PF00364 Biotin-requiring enzyme M662_11540 PF02817 e3 binding domain M662_11540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M662_11545 PF02780 Transketolase, C-terminal domain M662_11545 PF02779 Transketolase, pyrimidine binding domain M662_11550 PF00676 Dehydrogenase E1 component M662_11555 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_11555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M662_11560 PF00871 Acetokinase family M662_11565 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M662_11565 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M662_11570 PF01515 Phosphate acetyl/butaryl transferase M662_11575 PF02954 Bacterial regulatory protein, Fis family M662_11575 PF00989 PAS fold M662_11575 PF00158 Sigma-54 interaction domain M662_11590 PF02811 PHP domain M662_11590 PF00929 Exonuclease M662_11590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M662_11590 PF07733 Bacterial DNA polymerase III alpha NTPase domain M662_11590 PF14579 Helix-hairpin-helix motif M662_11595 PF00696 Amino acid kinase family M662_11595 PF13840 ACT domain M662_11605 PF08769 Sporulation initiation factor Spo0A C terminal M662_11605 PF00072 Response regulator receiver domain M662_11610 PF17820 PDZ domain M662_11610 PF05580 SpoIVB peptidase S55 M662_11615 PF13476 AAA domain M662_11620 PF02863 Arginine repressor, C-terminal domain M662_11620 PF01316 Arginine repressor, DNA binding domain M662_11625 PF01728 FtsJ-like methyltransferase M662_11625 PF01479 S4 domain M662_11630 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M662_11630 PF02779 Transketolase, pyrimidine binding domain M662_11630 PF02780 Transketolase, C-terminal domain M662_11640 PF00348 Polyprenyl synthetase M662_11645 PF02609 Exonuclease VII small subunit M662_11650 PF02601 Exonuclease VII, large subunit M662_11650 PF13742 OB-fold nucleic acid binding domain M662_11655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M662_11655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M662_11660 PF01029 NusB family M662_11665 PF03780 Asp23 family, cell envelope-related function M662_11670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M662_11670 PF02785 Biotin carboxylase C-terminal domain M662_11670 PF00289 Biotin carboxylase, N-terminal domain M662_11675 PF00364 Biotin-requiring enzyme M662_11680 PF12685 SpoIIIAH-like protein M662_11690 PF09581 Stage III sporulation protein AF (Spore_III_AF) M662_11695 PF09546 Stage III sporulation protein AE (spore_III_AE) M662_11700 PF06686 Stage III sporulation protein AC/AD protein family M662_11705 PF06686 Stage III sporulation protein AC/AD protein family M662_11720 PF09285 Elongation factor P, C-terminal M662_11720 PF08207 Elongation factor P (EF-P) KOW-like domain M662_11720 PF01132 Elongation factor P (EF-P) OB domain M662_11725 PF00557 Metallopeptidase family M24 M662_11725 PF01321 Creatinase/Prolidase N-terminal domain M662_11730 PF01220 Dehydroquinase class II M662_11735 PF11085 Conserved membrane protein YqhR M662_11745 PF01734 Patatin-like phospholipase M662_11750 PF01325 Iron dependent repressor, N-terminal DNA binding domain M662_11750 PF02742 Iron dependent repressor, metal binding and dimerisation domain M662_11755 PF02867 Ribonucleotide reductase, barrel domain M662_11755 PF00317 Ribonucleotide reductase, all-alpha domain M662_11755 PF03477 ATP cone domain M662_11760 PF00581 Rhodanese-like domain M662_11765 PF02347 Glycine cleavage system P-protein M662_11770 PF02347 Glycine cleavage system P-protein M662_11775 PF08669 Glycine cleavage T-protein C-terminal barrel domain M662_11775 PF01571 Aminomethyltransferase folate-binding domain M662_11780 PF00176 SNF2 family N-terminal domain M662_11780 PF00271 Helicase conserved C-terminal domain M662_11785 PF11079 Bacterial protein YqhG of unknown function M662_11790 PF14038 YqzE-like protein M662_11795 PF01202 Shikimate kinase M662_11800 PF00437 Type II/IV secretion system protein M662_11810 PF07963 Prokaryotic N-terminal methylation motif M662_11830 PF03960 ArsC family M662_11835 PF11117 Protein of unknown function (DUF2626) M662_11840 PF00753 Metallo-beta-lactamase superfamily M662_11850 PF03649 Uncharacterised protein family (UPF0014) M662_11855 PF00005 ABC transporter M662_11860 PF00884 Sulfatase M662_11865 PF00480 ROK family M662_11875 PF03323 Bacillus/Clostridium GerA spore germination protein M662_11885 PF01694 Rhomboid family M662_11895 PF01812 5-formyltetrahydrofolate cyclo-ligase family M662_11900 PF00471 Ribosomal protein L33 M662_11910 PF01895 PhoU domain M662_11915 PF00005 ABC transporter M662_11920 PF00528 Binding-protein-dependent transport system inner membrane component M662_11925 PF00528 Binding-protein-dependent transport system inner membrane component M662_11930 PF12849 PBP superfamily domain M662_11940 PF07690 Major Facilitator Superfamily M662_11945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M662_11945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M662_11975 PF02690 Na+/Pi-cotransporter M662_11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_11980 PF00672 HAMP domain M662_11980 PF02743 Cache domain M662_11990 PF04551 GcpE protein M662_12000 PF11116 Protein of unknown function (DUF2624) M662_12005 PF01261 Xylose isomerase-like TIM barrel M662_12010 PF00270 DEAD/DEAH box helicase M662_12010 PF00271 Helicase conserved C-terminal domain M662_12015 PF02401 LytB protein M662_12020 PF01784 NIF3 (NGG1p interacting factor 3) M662_12025 PF04816 tRNA (adenine(22)-N(1))-methyltransferase M662_12030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M662_12040 PF04545 Sigma-70, region 4 M662_12040 PF04539 Sigma-70 region 3 M662_12040 PF04542 Sigma-70 region 2 M662_12040 PF03979 Sigma-70 factor, region 1.1 M662_12040 PF00140 Sigma-70 factor, region 1.2 M662_12045 PF10410 DnaB-helicase binding domain of primase M662_12045 PF08275 DNA primase catalytic core, N-terminal domain M662_12045 PF01807 CHC2 zinc finger M662_12050 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M662_12055 PF03618 Kinase/pyrophosphorylase M662_12060 PF08279 HTH domain M662_12060 PF00571 CBS domain M662_12065 PF02092 Glycyl-tRNA synthetase beta subunit M662_12070 PF02091 Glycyl-tRNA synthetase alpha subunit M662_12075 PF11967 Recombination protein O N terminal M662_12075 PF02565 Recombination protein O C terminal M662_12080 PF14006 YqzL-like protein M662_12085 PF07650 KH domain M662_12085 PF01926 50S ribosome-binding GTPase M662_12090 PF01219 Prokaryotic diacylglycerol kinase M662_12095 PF02130 Uncharacterized protein family UPF0054 M662_12100 PF01966 HD domain M662_12100 PF07697 7TM-HD extracellular M662_12100 PF07698 7TM receptor with intracellular HD hydrolase M662_12105 PF02562 PhoH-like protein M662_12115 PF07873 YabP family M662_12125 PF12127 SigmaW regulon antibacterial M662_12130 PF01972 Serine dehydrogenase proteinase M662_12130 PF01957 NfeD-like C-terminal, partner-binding M662_12135 PF09424 Yqey-like protein M662_12140 PF01165 Ribosomal protein S21 M662_12145 PF01791 DeoC/LacD family aldolase M662_12150 PF04452 RNA methyltransferase M662_12160 PF00226 DnaJ domain M662_12160 PF01556 DnaJ C terminal domain M662_12160 PF00684 DnaJ central domain M662_12165 PF00012 Hsp70 protein M662_12170 PF01025 GrpE M662_12175 PF01628 HrcA protein C terminal domain M662_12180 PF04055 Radical SAM superfamily M662_12180 PF06969 HemN C-terminal domain M662_12185 PF06421 GTP-binding protein LepA C-terminus M662_12185 PF03144 Elongation factor Tu domain 2 M662_12185 PF00009 Elongation factor Tu GTP binding domain M662_12185 PF14492 Elongation Factor G, domain II M662_12185 PF00679 Elongation factor G C-terminus M662_12195 PF07454 Stage II sporulation protein P (SpoIIP) M662_12200 PF03418 Germination protease M662_12205 PF01649 Ribosomal protein S20 M662_12210 PF06144 DNA polymerase III, delta subunit M662_12220 PF13567 Domain of unknown function (DUF4131) M662_12220 PF03772 Competence protein M662_12220 PF00753 Metallo-beta-lactamase superfamily M662_12225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M662_12230 PF10531 SLBB domain M662_12235 PF14748 Pyrroline-5-carboxylate reductase dimerisation M662_12235 PF03807 NADP oxidoreductase coenzyme F420-dependent M662_12240 PF13649 Methyltransferase domain M662_12250 PF01966 HD domain M662_12255 PF01467 Cytidylyltransferase-like M662_12260 PF01985 CRS1 / YhbY (CRM) domain M662_12265 PF08501 Shikimate dehydrogenase substrate binding domain M662_12265 PF01488 Shikimate / quinate 5-dehydrogenase M662_12265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M662_12270 PF01926 50S ribosome-binding GTPase M662_12285 PF00361 Proton-conducting membrane transporter M662_12285 PF13244 Domain of unknown function (DUF4040) M662_12285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M662_12290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M662_12305 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M662_12315 PF04542 Sigma-70 region 2 M662_12315 PF04545 Sigma-70, region 4 M662_12325 PF01048 Phosphorylase superfamily M662_12335 PF01272 Transcription elongation factor, GreA/GreB, C-term M662_12335 PF03449 Transcription elongation factor, N-terminal M662_12340 PF00485 Phosphoribulokinase / Uridine kinase family M662_12345 PF01596 O-methyltransferase M662_12350 PF02618 YceG-like family M662_12355 PF06949 Protein of unknown function (DUF1292) M662_12360 PF03652 Holliday junction resolvase M662_12365 PF06135 IreB regulatory phosphoprotein M662_12370 PF02272 DHHA1 domain M662_12370 PF01411 tRNA synthetases class II (A) M662_12370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M662_12375 PF01594 AI-2E family transporter M662_12385 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain M662_12385 PF14490 Helix-hairpin-helix containing domain M662_12385 PF13538 UvrD-like helicase C-terminal domain M662_12400 PF00266 Aminotransferase class-V M662_12405 PF02082 Transcriptional regulator M662_12415 PF16193 AAA C-terminal domain M662_12415 PF12002 MgsA AAA+ ATPase C terminal M662_12415 PF05496 Holliday junction DNA helicase RuvB P-loop domain M662_12430 PF00152 tRNA synthetases class II (D, K and N) M662_12430 PF02938 GAD domain M662_12430 PF01336 OB-fold nucleic acid binding domain M662_12435 PF13393 Histidyl-tRNA synthetase M662_12435 PF03129 Anticodon binding domain M662_12440 PF08239 Bacterial SH3 domain M662_12440 PF01520 N-acetylmuramoyl-L-alanine amidase M662_12445 PF02580 D-Tyr-tRNA(Tyr) deacylase M662_12450 PF13291 ACT domain M662_12450 PF04607 Region found in RelA / SpoT proteins M662_12450 PF02824 TGS domain M662_12455 PF00156 Phosphoribosyl transferase domain M662_12460 PF01368 DHH family M662_12460 PF10141 Single-strand DNA-specific exonuclease, C terminal domain M662_12460 PF17768 RecJ OB domain M662_12460 PF02272 DHHA1 domain M662_12465 PF06305 Lipopolysaccharide assembly protein A domain M662_12470 PF07549 SecD/SecF GG Motif M662_12470 PF02355 Protein export membrane protein M662_12480 PF01943 Polysaccharide biosynthesis protein M662_12480 PF14667 Polysaccharide biosynthesis C-terminal domain M662_12485 PF04239 Protein of unknown function (DUF421) M662_12490 PF03600 Citrate transporter M662_12500 PF02699 Preprotein translocase subunit M662_12505 PF01702 Queuine tRNA-ribosyltransferase M662_12510 PF02547 Queuosine biosynthesis protein M662_12515 PF11146 Protein of unknown function (DUF2905) M662_12520 PF17864 RuvB AAA lid domain M662_12520 PF05491 RuvB C-terminal winged helix domain M662_12520 PF05496 Holliday junction DNA helicase RuvB P-loop domain M662_12525 PF07499 RuvA, C-terminal domain M662_12525 PF01330 RuvA N terminal domain M662_12530 PF08977 Bypass of Forespore C, N terminal M662_12530 PF08955 BofC C-terminal domain M662_12535 PF01709 Transcriptional regulator M662_12545 PF02540 NAD synthase M662_12555 PF01476 LysM domain M662_12560 PF01842 ACT domain M662_12560 PF00800 Prephenate dehydratase M662_12565 PF01842 ACT domain M662_12570 PF09269 Domain of unknown function (DUF1967) M662_12570 PF01018 GTP1/OBG M662_12570 PF01926 50S ribosome-binding GTPase M662_12575 PF14682 Sporulation initiation phospho-transferase B, C-terminal M662_12575 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M662_12580 PF01016 Ribosomal L27 protein M662_12585 PF04327 Cysteine protease Prp M662_12590 PF00829 Ribosomal prokaryotic L21 protein M662_12595 PF00575 S1 RNA binding domain M662_12595 PF10150 Ribonuclease E/G family M662_12600 PF02163 Peptidase family M50 M662_12610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M662_12615 PF03775 Septum formation inhibitor MinC, C-terminal domain M662_12625 PF04085 rod shape-determining protein MreC M662_12635 PF04002 RadC-like JAB domain M662_12640 PF02545 Maf-like protein M662_12665 PF01478 Type IV leader peptidase family M662_12665 PF06750 Bacterial Peptidase A24 N-terminal domain M662_12675 PF00482 Type II secretion system (T2SS), protein F M662_12680 PF00437 Type II/IV secretion system protein M662_12685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M662_12685 PF00437 Type II/IV secretion system protein M662_12695 PF08245 Mur ligase middle domain M662_12695 PF02875 Mur ligase family, glutamate ligase domain M662_12700 PF10458 Valyl tRNA synthetase tRNA binding arm M662_12700 PF00133 tRNA synthetases class I (I, L, M and V) M662_12700 PF08264 Anticodon-binding domain of tRNA M662_12705 PF01476 LysM domain M662_12710 PF00202 Aminotransferase class-III M662_12715 PF00490 Delta-aminolevulinic acid dehydratase M662_12720 PF02602 Uroporphyrinogen-III synthase HemD M662_12725 PF03900 Porphobilinogen deaminase, C-terminal domain M662_12725 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M662_12730 PF01578 Cytochrome C assembly protein M662_12735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M662_12735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M662_12735 PF01488 Shikimate / quinate 5-dehydrogenase M662_12745 PF00005 ABC transporter M662_12755 PF00497 Bacterial extracellular solute-binding proteins, family 3 M662_12760 PF01926 50S ribosome-binding GTPase M662_12765 PF00004 ATPase family associated with various cellular activities (AAA) M662_12765 PF05362 Lon protease (S16) C-terminal proteolytic domain M662_12765 PF02190 ATP-dependent protease La (LON) substrate-binding domain M662_12770 PF06689 ClpX C4-type zinc finger M662_12770 PF10431 C-terminal, D2-small domain, of ClpB protein M662_12770 PF07724 AAA domain (Cdc48 subfamily) M662_12775 PF05698 Bacterial trigger factor protein (TF) C-terminus M662_12775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M662_12775 PF05697 Bacterial trigger factor protein (TF) M662_12795 PF04134 Protein of unknown function, DUF393 M662_12820 PF05036 Sporulation related domain M662_12820 PF01520 N-acetylmuramoyl-L-alanine amidase M662_12865 PF14659 Phage integrase, N-terminal SAM-like domain M662_12865 PF00589 Phage integrase family M662_12875 PF02481 DNA recombination-mediator protein A M662_12890 PF12850 Calcineurin-like phosphoesterase superfamily domain M662_12895 PF01725 Ham1 family M662_12900 PF03725 3' exoribonuclease family, domain 2 M662_12900 PF01138 3' exoribonuclease family, domain 1 M662_12905 PF10646 Sporulation and spore germination M662_12910 PF01177 Asp/Glu/Hydantoin racemase M662_12915 PF01047 MarR family M662_12920 PF00196 Bacterial regulatory proteins, luxR family M662_12925 PF00196 Bacterial regulatory proteins, luxR family M662_12925 PF00072 Response regulator receiver domain M662_12930 PF07730 Histidine kinase M662_12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_12935 PF13183 4Fe-4S dicluster domain M662_12935 PF13085 2Fe-2S iron-sulfur cluster binding domain M662_12940 PF00890 FAD binding domain M662_12940 PF02910 Fumarate reductase flavoprotein C-term M662_12945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M662_12955 PF08459 UvrC Helix-hairpin-helix N-terminal M662_12955 PF02151 UvrB/uvrC motif M662_12955 PF01541 GIY-YIG catalytic domain M662_12960 PF00085 Thioredoxin M662_12965 PF00766 Electron transfer flavoprotein FAD-binding domain M662_12965 PF01012 Electron transfer flavoprotein domain M662_12970 PF01012 Electron transfer flavoprotein domain M662_12975 PF00378 Enoyl-CoA hydratase/isomerase M662_12980 PF08359 YsiA-like protein, C-terminal region M662_12980 PF00440 Bacterial regulatory proteins, tetR family M662_12985 PF00501 AMP-binding enzyme M662_12985 PF13193 AMP-binding enzyme C-terminal domain M662_12990 PF03994 Domain of Unknown Function (DUF350) M662_12995 PF00488 MutS domain V M662_12995 PF01713 Smr domain M662_13000 PF02811 PHP domain M662_13000 PF14791 DNA polymerase beta thumb M662_13000 PF14716 Helix-hairpin-helix domain M662_13005 PF02674 Colicin V production protein M662_13010 PF05164 Cell division protein ZapA M662_13015 PF01351 Ribonuclease HII M662_13015 PF11858 Domain of unknown function (DUF3378) M662_13020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M662_13020 PF03147 Ferredoxin-fold anticodon binding domain M662_13020 PF03484 tRNA synthetase B5 domain M662_13020 PF03483 B3/4 domain M662_13020 PF01588 Putative tRNA binding domain M662_13025 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M662_13025 PF01409 tRNA synthetases class II core domain (F) M662_13030 PF00588 SpoU rRNA Methylase family M662_13030 PF08032 RNA 2'-O ribose methyltransferase substrate binding M662_13035 PF14098 Small, acid-soluble spore protein I M662_13040 PF05343 M42 glutamyl aminopeptidase M662_13055 PF09335 SNARE associated Golgi protein M662_13065 PF00453 Ribosomal protein L20 M662_13070 PF01632 Ribosomal protein L35 M662_13075 PF00707 Translation initiation factor IF-3, C-terminal domain M662_13075 PF05198 Translation initiation factor IF-3, N-terminal domain M662_13080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M662_13080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M662_13080 PF02824 TGS domain M662_13080 PF03129 Anticodon binding domain M662_13090 PF07319 Primosomal protein DnaI N-terminus M662_13090 PF01695 IstB-like ATP binding protein M662_13095 PF07261 Replication initiation and membrane attachment M662_13100 PF03477 ATP cone domain M662_13110 PF02675 S-adenosylmethionine decarboxylase M662_13115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M662_13115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M662_13120 PF01121 Dephospho-CoA kinase M662_13135 PF00476 DNA polymerase family A M662_13135 PF01367 5'-3' exonuclease, C-terminal SAM fold M662_13135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M662_13145 PF01145 SPFH domain / Band 7 family M662_13150 PF00512 His Kinase A (phospho-acceptor) domain M662_13150 PF00989 PAS fold M662_13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_13150 PF16736 Single Cache-like M662_13155 PF00486 Transcriptional regulatory protein, C terminal M662_13155 PF00072 Response regulator receiver domain M662_13165 PF00056 lactate/malate dehydrogenase, NAD binding domain M662_13165 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M662_13170 PF00180 Isocitrate/isopropylmalate dehydrogenase M662_13175 PF00285 Citrate synthase, C-terminal domain M662_13180 PF01594 AI-2E family transporter M662_13185 PF04186 FxsA cytoplasmic membrane protein M662_13190 PF00224 Pyruvate kinase, barrel domain M662_13190 PF00391 PEP-utilising enzyme, mobile domain M662_13190 PF02887 Pyruvate kinase, alpha/beta domain M662_13195 PF00365 Phosphofructokinase M662_13200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M662_13205 PF17848 Acetyl-coA carboxylase zinc finger domain M662_13205 PF01039 Carboxyl transferase domain M662_13210 PF00392 Bacterial regulatory proteins, gntR family M662_13210 PF07702 UTRA domain M662_13215 PF00390 Malic enzyme, N-terminal domain M662_13215 PF03949 Malic enzyme, NAD binding domain M662_13220 PF07733 Bacterial DNA polymerase III alpha NTPase domain M662_13220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M662_13220 PF14579 Helix-hairpin-helix motif M662_13220 PF02811 PHP domain M662_13220 PF01336 OB-fold nucleic acid binding domain M662_13225 PF14034 Sporulation protein YtrH M662_13235 PF01368 DHH family M662_13235 PF02272 DHHA1 domain M662_13245 PF03061 Thioesterase superfamily M662_13245 PF00392 Bacterial regulatory proteins, gntR family M662_13245 PF00571 CBS domain M662_13245 PF07085 DRTGG domain M662_13265 PF04012 PspA/IM30 family M662_13275 PF01758 Sodium Bile acid symporter family M662_13280 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M662_13280 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M662_13290 PF00582 Universal stress protein family M662_13295 PF00994 Probable molybdopterin binding domain M662_13305 PF00871 Acetokinase family M662_13310 PF02384 N-6 DNA Methylase M662_13315 PF01513 ATP-NAD kinase M662_13320 PF07969 Amidohydrolase family M662_13325 PF02568 Thiamine biosynthesis protein (ThiI) M662_13325 PF02926 THUMP domain M662_13330 PF00266 Aminotransferase class-V M662_13340 PF06160 Septation ring formation regulator, EzrA M662_13345 PF02811 PHP domain M662_13350 PF00440 Bacterial regulatory proteins, tetR family M662_13355 PF13185 GAF domain M662_13360 PF00990 Diguanylate cyclase, GGDEF domain M662_13365 PF01479 S4 domain M662_13365 PF00163 Ribosomal protein S4/S9 N-terminal domain M662_13370 PF01479 S4 domain M662_13370 PF00579 tRNA synthetases class I (W and Y) M662_13375 PF00905 Penicillin binding protein transpeptidase domain M662_13375 PF00912 Transglycosylase M662_13380 PF00583 Acetyltransferase (GNAT) family M662_13385 PF00571 CBS domain M662_13390 PF00850 Histone deacetylase domain M662_13395 PF00691 OmpA family M662_13395 PF13677 Membrane MotB of proton-channel complex MotA/MotB M662_13400 PF01618 MotA/TolQ/ExbB proton channel family M662_13405 PF00356 Bacterial regulatory proteins, lacI family M662_13410 PF01817 Chorismate mutase type II M662_13410 PF00793 DAHP synthetase I family M662_13415 PF11009 Protein of unknown function (DUF2847) M662_13420 PF12732 YtxH-like protein M662_13430 PF01225 Mur ligase family, catalytic domain M662_13430 PF02875 Mur ligase family, glutamate ligase domain M662_13430 PF08245 Mur ligase middle domain M662_13440 PF17854 FtsK alpha domain M662_13440 PF01580 FtsK/SpoIIIE family M662_13440 PF09397 Ftsk gamma domain M662_13445 PF14794 Domain of unknown function (DUF4479) M662_13445 PF01588 Putative tRNA binding domain M662_13450 PF07285 Protein of unknown function (DUF1444) M662_13455 PF00085 Thioredoxin M662_13465 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ M662_13470 PF01931 Protein of unknown function DUF84 M662_13475 PF05343 M42 glutamyl aminopeptidase M662_13485 PF00753 Metallo-beta-lactamase superfamily M662_13490 PF02390 Putative methyltransferase M662_13495 PF01636 Phosphotransferase enzyme family M662_13500 PF00781 Diacylglycerol kinase catalytic domain M662_13505 PF12792 CSS motif domain associated with EAL M662_13505 PF00563 EAL domain M662_13520 PF01546 Peptidase family M20/M25/M40 M662_13525 PF07885 Ion channel M662_13525 PF02254 TrkA-N domain M662_13530 PF08220 DeoR-like helix-turn-helix domain M662_13535 PF00849 RNA pseudouridylate synthase M662_13535 PF01479 S4 domain M662_13540 PF14667 Polysaccharide biosynthesis C-terminal domain M662_13540 PF01943 Polysaccharide biosynthesis protein M662_13575 PF00581 Rhodanese-like domain M662_13580 PF09334 tRNA synthetases class I (M) M662_13580 PF00133 tRNA synthetases class I (I, L, M and V) M662_13580 PF08264 Anticodon-binding domain of tRNA M662_13580 PF13603 Leucyl-tRNA synthetase, Domain 2 M662_13585 PF06962 Putative rRNA methylase M662_13590 PF10776 Protein of unknown function (DUF2600) M662_13595 PF12146 Serine aminopeptidase, S33 M662_13600 PF00132 Bacterial transferase hexapeptide (six repeats) M662_13605 PF02773 S-adenosylmethionine synthetase, C-terminal domain M662_13605 PF00438 S-adenosylmethionine synthetase, N-terminal domain M662_13605 PF02772 S-adenosylmethionine synthetase, central domain M662_13610 PF01293 Phosphoenolpyruvate carboxykinase M662_13615 PF00293 NUDIX domain M662_13625 PF13378 Enolase C-terminal domain-like M662_13625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M662_13630 PF13193 AMP-binding enzyme C-terminal domain M662_13630 PF00501 AMP-binding enzyme M662_13635 PF00378 Enoyl-CoA hydratase/isomerase M662_13640 PF00561 alpha/beta hydrolase fold M662_13645 PF16582 Middle domain of thiamine pyrophosphate M662_13645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M662_13645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M662_13650 PF00425 chorismate binding enzyme M662_13655 PF01040 UbiA prenyltransferase family M662_13660 PF03061 Thioesterase superfamily M662_13665 PF01258 Prokaryotic dksA/traR C4-type zinc finger M662_13670 PF12822 ECF transporter, substrate-specific component M662_13680 PF00210 Ferritin-like domain M662_13710 PF02080 TrkA-C domain M662_13710 PF00999 Sodium/hydrogen exchanger family M662_13710 PF03471 Transporter associated domain M662_13720 PF05343 M42 glutamyl aminopeptidase M662_13730 PF02254 TrkA-N domain M662_13730 PF07885 Ion channel M662_13735 PF08868 YugN-like family M662_13740 PF00342 Phosphoglucose isomerase M662_13745 PF00465 Iron-containing alcohol dehydrogenase M662_13750 PF04070 Domain of unknown function (DUF378) M662_13755 PF00575 S1 RNA binding domain M662_13765 PF00155 Aminotransferase class I and II M662_13770 PF00080 Copper/zinc superoxide dismutase (SODC) M662_13770 PF13627 Prokaryotic lipoprotein-attachment site M662_13780 PF08810 Kinase associated protein B M662_13785 PF01048 Phosphorylase superfamily M662_13795 PF02681 Divergent PAP2 family M662_13800 PF06725 3D domain M662_13810 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_13815 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_13825 PF01521 Iron-sulphur cluster biosynthesis M662_13830 PF07293 Protein of unknown function (DUF1450) M662_13835 PF07315 Protein of unknown function (DUF1462) M662_13840 PF01106 NifU-like domain M662_13845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M662_13845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M662_13850 PF04608 Phosphatidylglycerophosphatase A M662_13860 PF13344 Haloacid dehalogenase-like hydrolase M662_13865 PF01934 Protein of unknown function DUF86 M662_13880 PF06265 Protein of unknown function (DUF1027) M662_13885 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M662_13890 PF01551 Peptidase family M23 M662_13900 PF00209 Sodium:neurotransmitter symporter family M662_13905 PF03553 Na+/H+ antiporter family M662_13910 PF09560 Sporulation protein YunB (Spo_YunB) M662_13915 PF02872 5'-nucleotidase, C-terminal domain M662_13920 PF01925 Sulfite exporter TauE/SafE M662_13925 PF01458 Uncharacterized protein family (UPF0051) M662_13930 PF01592 NifU-like N terminal domain M662_13935 PF00266 Aminotransferase class-V M662_13940 PF01458 Uncharacterized protein family (UPF0051) M662_13945 PF00005 ABC transporter M662_13950 PF02627 Carboxymuconolactone decarboxylase family M662_13955 PF03180 NLPA lipoprotein M662_13960 PF00528 Binding-protein-dependent transport system inner membrane component M662_13965 PF00005 ABC transporter M662_13965 PF09383 NIL domain M662_13980 PF00085 Thioredoxin M662_13985 PF01751 Toprim domain M662_13990 PF01597 Glycine cleavage H-protein M662_13995 PF03960 ArsC family M662_14000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_14000 PF02770 Acyl-CoA dehydrogenase, middle domain M662_14000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_14005 PF00108 Thiolase, N-terminal domain M662_14005 PF02803 Thiolase, C-terminal domain M662_14010 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M662_14010 PF00378 Enoyl-CoA hydratase/isomerase M662_14010 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M662_14015 PF01619 Proline dehydrogenase M662_14025 PF07875 Coat F domain M662_14030 PF00403 Heavy-metal-associated domain M662_14055 PF18846 Bacterial archaeo-eukaryotic release factor family 5 M662_14060 PF14151 YfhD-like protein M662_14065 PF07690 Major Facilitator Superfamily M662_14085 PF00258 Flavodoxin M662_14100 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal M662_14100 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal M662_14105 PF00463 Isocitrate lyase family M662_14110 PF01274 Malate synthase M662_14115 PF00300 Histidine phosphatase superfamily (branch 1) M662_14120 PF00920 Dehydratase family M662_14125 PF07561 Domain of Unknown Function (DUF1540) M662_14130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M662_14130 PF01565 FAD binding domain M662_14135 PF16197 Ketoacyl-synthetase C-terminal extension M662_14135 PF14765 Polyketide synthase dehydratase M662_14135 PF00550 Phosphopantetheine attachment site M662_14135 PF08659 KR domain M662_14135 PF02801 Beta-ketoacyl synthase, C-terminal domain M662_14135 PF00109 Beta-ketoacyl synthase, N-terminal domain M662_14135 PF00698 Acyl transferase domain M662_14135 PF08240 Alcohol dehydrogenase GroES-like domain M662_14140 PF01638 HxlR-like helix-turn-helix M662_14145 PF14005 YpjP-like protein M662_14150 PF07875 Coat F domain M662_14155 PF01810 LysE type translocator M662_14160 PF08892 YqcI/YcgG family M662_14165 PF00324 Amino acid permease M662_14180 PF01668 SmpB protein M662_14195 PF17876 Cold shock domain M662_14195 PF00575 S1 RNA binding domain M662_14195 PF08206 Ribonuclease B OB domain M662_14195 PF00773 RNB domain M662_14200 PF12146 Serine aminopeptidase, S33 M662_14205 PF03840 Preprotein translocase SecG subunit M662_14210 PF08220 DeoR-like helix-turn-helix domain M662_14210 PF00455 DeoR C terminal sensor domain M662_14215 PF00294 pfkB family carbohydrate kinase M662_14220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M662_14220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M662_14225 PF00381 PTS HPr component phosphorylation site M662_14230 PF05524 PEP-utilising enzyme, N-terminal M662_14230 PF02896 PEP-utilising enzyme, TIM barrel domain M662_14230 PF00391 PEP-utilising enzyme, mobile domain M662_14240 PF00881 Nitroreductase family M662_14245 PF02698 DUF218 domain M662_14250 PF00113 Enolase, C-terminal TIM barrel domain M662_14250 PF03952 Enolase, N-terminal domain M662_14255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M662_14255 PF01676 Metalloenzyme superfamily M662_14260 PF00121 Triosephosphate isomerase M662_14265 PF00162 Phosphoglycerate kinase M662_14270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M662_14270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M662_14275 PF04198 Putative sugar-binding domain M662_14295 PF00574 Clp protease M662_14300 PF00381 PTS HPr component phosphorylation site M662_14305 PF10298 WhiA N-terminal LAGLIDADG-like domain M662_14305 PF14527 WhiA LAGLIDADG-like domain M662_14305 PF02650 WhiA C-terminal HTH domain M662_14310 PF01933 Uncharacterised protein family UPF0052 M662_14315 PF03668 P-loop ATPase protein family M662_14320 PF00293 NUDIX domain M662_14325 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_14335 PF01502 Phosphoribosyl-AMP cyclohydrolase M662_14335 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M662_14340 PF00977 Histidine biosynthesis protein M662_14345 PF00977 Histidine biosynthesis protein M662_14350 PF00117 Glutamine amidotransferase class-I M662_14355 PF00475 Imidazoleglycerol-phosphate dehydratase M662_14360 PF00815 Histidinol dehydrogenase M662_14365 PF01634 ATP phosphoribosyltransferase M662_14370 PF13393 Histidyl-tRNA synthetase M662_14380 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M662_14380 PF01266 FAD dependent oxidoreductase M662_14385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M662_14385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M662_14390 PF00230 Major intrinsic protein M662_14395 PF04309 Glycerol-3-phosphate responsive antiterminator M662_14400 PF14602 Hexapeptide repeat of succinyl-transferase M662_14405 PF13419 Haloacid dehalogenase-like hydrolase M662_14410 PF07670 Nucleoside recognition M662_14415 PF01790 Prolipoprotein diacylglyceryl transferase M662_14420 PF02603 HPr Serine kinase N terminus M662_14420 PF07475 HPr Serine kinase C-terminal domain M662_14425 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M662_14430 PF13349 Putative adhesin M662_14435 PF02585 GlcNAc-PI de-N-acetylase M662_14440 PF08830 Protein of unknown function (DUF1806) M662_14445 PF17760 UvrA interaction domain M662_14445 PF17755 UvrA DNA-binding domain M662_14445 PF00005 ABC transporter M662_14450 PF12344 Ultra-violet resistance protein B M662_14450 PF17757 UvrB interaction domain M662_14450 PF00271 Helicase conserved C-terminal domain M662_14450 PF04851 Type III restriction enzyme, res subunit M662_14450 PF02151 UvrB/uvrC motif M662_14455 PF16658 Class II release factor RF3, C-terminal domain M662_14455 PF03144 Elongation factor Tu domain 2 M662_14455 PF00009 Elongation factor Tu GTP binding domain M662_14460 PF00271 Helicase conserved C-terminal domain M662_14460 PF00176 SNF2 family N-terminal domain M662_14460 PF12419 SNF2 Helicase protein M662_14465 PF02628 Cytochrome oxidase assembly protein M662_14470 PF00005 ABC transporter M662_14475 PF02417 Chromate transporter M662_14480 PF02417 Chromate transporter M662_14490 PF00576 HIUase/Transthyretin family M662_14500 PF13556 PucR C-terminal helix-turn-helix domain M662_14500 PF07905 Purine catabolism regulatory protein-like family M662_14500 PF17853 GGDEF-like domain M662_14505 PF01546 Peptidase family M20/M25/M40 M662_14510 PF00266 Aminotransferase class-V M662_14515 PF01979 Amidohydrolase family M662_14520 PF01557 Fumarylacetoacetate (FAA) hydrolase family M662_14525 PF01425 Amidase M662_14530 PF01799 [2Fe-2S] binding domain M662_14530 PF00111 2Fe-2S iron-sulfur cluster binding domain M662_14535 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain M662_14535 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M662_14540 PF00941 FAD binding domain in molybdopterin dehydrogenase M662_14540 PF03450 CO dehydrogenase flavoprotein C-terminal domain M662_14545 PF12804 MobA-like NTP transferase domain M662_14550 PF02625 XdhC and CoxI family M662_14550 PF13478 XdhC Rossmann domain M662_14555 PF01979 Amidohydrolase family M662_14560 PF03606 C4-dicarboxylate anaerobic carrier M662_14610 PF17820 PDZ domain M662_14615 PF01471 Putative peptidoglycan binding domain M662_14615 PF03572 Peptidase family S41 M662_14615 PF17820 PDZ domain M662_14620 PF00005 ABC transporter M662_14625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M662_14630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M662_14630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M662_14635 PF00483 Nucleotidyl transferase M662_14645 PF07517 SecA DEAD-like domain M662_14645 PF07516 SecA Wing and Scaffold domain M662_14645 PF01043 SecA preprotein cross-linking domain M662_14645 PF02810 SEC-C motif M662_14660 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M662_14660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M662_14675 PF02561 Flagellar protein FliS M662_14680 PF02465 Flagellar hook-associated protein 2 N-terminus M662_14680 PF07195 Flagellar hook-associated protein 2 C-terminus M662_14685 PF03646 FlaG protein M662_14690 PF02599 Global regulator protein family M662_14695 PF02623 FliW protein M662_14705 PF00700 Bacterial flagellin C-terminal helical region M662_14705 PF00669 Bacterial flagellin N-terminal helical region M662_14710 PF00460 Flagella basal body rod protein M662_14710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M662_14715 PF05130 FlgN protein M662_14735 PF04851 Type III restriction enzyme, res subunit M662_14735 PF00271 Helicase conserved C-terminal domain M662_14740 PF02645 Uncharacterised protein, DegV family COG1307 M662_14745 PF00196 Bacterial regulatory proteins, luxR family M662_14745 PF00072 Response regulator receiver domain M662_14750 PF05384 Sensor protein DegS M662_14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_14750 PF07730 Histidine kinase M662_14755 PF09186 Domain of unknown function (DUF1949) M662_14755 PF01205 Uncharacterized protein family UPF0029 M662_14760 PF03816 Cell envelope-related transcriptional attenuator domain M662_14765 PF00953 Glycosyl transferase family 4 M662_14775 PF03816 Cell envelope-related transcriptional attenuator domain M662_14785 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) M662_14795 PF02903 Alpha amylase, N-terminal ig-like domain M662_14795 PF16657 Maltogenic Amylase, C-terminal domain M662_14795 PF00128 Alpha amylase, catalytic domain M662_14810 PF05225 helix-turn-helix, Psq domain M662_14810 PF02810 SEC-C motif M662_14815 PF02687 FtsX-like permease family M662_14815 PF12704 MacB-like periplasmic core domain M662_14820 PF00005 ABC transporter M662_14825 PF07883 Cupin domain M662_14830 PF01554 MatE M662_14835 PF00672 HAMP domain M662_14835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_14835 PF02743 Cache domain M662_14840 PF02374 Anion-transporting ATPase M662_14850 PF02554 Carbon starvation protein CstA M662_14850 PF13722 5TM C-terminal transporter carbon starvation CstA M662_14855 PF00082 Subtilase family M662_14860 PF01699 Sodium/calcium exchanger protein M662_14865 PF00005 ABC transporter M662_14870 PF00528 Binding-protein-dependent transport system inner membrane component M662_14875 PF00497 Bacterial extracellular solute-binding proteins, family 3 M662_14880 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain M662_14880 PF01740 STAS domain M662_14895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_14895 PF00512 His Kinase A (phospho-acceptor) domain M662_14895 PF00672 HAMP domain M662_14900 PF00486 Transcriptional regulatory protein, C terminal M662_14900 PF00072 Response regulator receiver domain M662_14905 PF13183 4Fe-4S dicluster domain M662_14905 PF02754 Cysteine-rich domain M662_14910 PF01565 FAD binding domain M662_14910 PF02913 FAD linked oxidases, C-terminal domain M662_14915 PF01418 Helix-turn-helix domain, rpiR family M662_14915 PF01380 SIS domain M662_14920 PF00528 Binding-protein-dependent transport system inner membrane component M662_14925 PF00528 Binding-protein-dependent transport system inner membrane component M662_14935 PF01380 SIS domain M662_14940 PF01869 BadF/BadG/BcrA/BcrD ATPase family M662_14950 PF06018 CodY GAF-like domain M662_14950 PF13556 PucR C-terminal helix-turn-helix domain M662_14950 PF17853 GGDEF-like domain M662_14955 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M662_14955 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M662_14965 PF00106 short chain dehydrogenase M662_14980 PF16868 NMT1-like family M662_14985 PF13302 Acetyltransferase (GNAT) domain M662_14990 PF00072 Response regulator receiver domain M662_14990 PF04703 FaeA-like protein M662_14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_14995 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M662_14995 PF17203 Single cache domain 3 M662_15000 PF03480 Bacterial extracellular solute-binding protein, family 7 M662_15010 PF01266 FAD dependent oxidoreductase M662_15015 PF08943 CsiD M662_15020 PF02417 Chromate transporter M662_15025 PF02417 Chromate transporter M662_15030 PF02595 Glycerate kinase family M662_15040 PF00378 Enoyl-CoA hydratase/isomerase M662_15045 PF00108 Thiolase, N-terminal domain M662_15045 PF02803 Thiolase, C-terminal domain M662_15050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_15050 PF02770 Acyl-CoA dehydrogenase, middle domain M662_15050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_15060 PF00005 ABC transporter M662_15065 PF00005 ABC transporter M662_15065 PF12399 Branched-chain amino acid ATP-binding cassette transporter M662_15070 PF11862 Domain of unknown function (DUF3382) M662_15070 PF02653 Branched-chain amino acid transport system / permease component M662_15075 PF02653 Branched-chain amino acid transport system / permease component M662_15080 PF13193 AMP-binding enzyme C-terminal domain M662_15080 PF00501 AMP-binding enzyme M662_15090 PF03061 Thioesterase superfamily M662_15095 PF00440 Bacterial regulatory proteins, tetR family M662_15100 PF02803 Thiolase, C-terminal domain M662_15100 PF00108 Thiolase, N-terminal domain M662_15110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_15110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_15110 PF02770 Acyl-CoA dehydrogenase, middle domain M662_15120 PF13452 N-terminal half of MaoC dehydratase M662_15130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_15130 PF02770 Acyl-CoA dehydrogenase, middle domain M662_15130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_15135 PF04239 Protein of unknown function (DUF421) M662_15140 PF00082 Subtilase family M662_15145 PF00082 Subtilase family M662_15160 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) M662_15175 PF00005 ABC transporter M662_15175 PF00664 ABC transporter transmembrane region M662_15180 PF01970 Tripartite tricarboxylate transporter TctA family M662_15195 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M662_15195 PF01297 Zinc-uptake complex component A periplasmic M662_15200 PF00072 Response regulator receiver domain M662_15200 PF00486 Transcriptional regulatory protein, C terminal M662_15205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_15205 PF00512 His Kinase A (phospho-acceptor) domain M662_15205 PF00989 PAS fold M662_15205 PF16736 Single Cache-like M662_15210 PF02687 FtsX-like permease family M662_15215 PF00005 ABC transporter M662_15220 PF00072 Response regulator receiver domain M662_15220 PF12431 Transcriptional regulator M662_15225 PF17203 Single cache domain 3 M662_15225 PF00989 PAS fold M662_15225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_15225 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M662_15230 PF03610 PTS system fructose IIA component M662_15235 PF02734 DAK2 domain M662_15240 PF02733 Dak1 domain M662_15245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M662_15245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M662_15250 PF00230 Major intrinsic protein M662_15260 PF03816 Cell envelope-related transcriptional attenuator domain M662_15265 PF04122 Putative cell wall binding repeat 2 M662_15265 PF01520 N-acetylmuramoyl-L-alanine amidase M662_15270 PF00884 Sulfatase M662_15285 PF07729 FCD domain M662_15285 PF00392 Bacterial regulatory proteins, gntR family M662_15290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M662_15290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M662_15300 PF02447 GntP family permease M662_15315 PF01638 HxlR-like helix-turn-helix M662_15340 PF09587 Bacterial capsule synthesis protein PGA_cap M662_15345 PF14102 Capsule biosynthesis CapC M662_15350 PF08245 Mur ligase middle domain M662_15355 PF00149 Calcineurin-like phosphoesterase M662_15355 PF02872 5'-nucleotidase, C-terminal domain M662_15360 PF04122 Putative cell wall binding repeat 2 M662_15360 PF01520 N-acetylmuramoyl-L-alanine amidase M662_15365 PF00005 ABC transporter M662_15390 PF00209 Sodium:neurotransmitter symporter family M662_15405 PF00854 POT family M662_15410 PF01470 Pyroglutamyl peptidase M662_15415 PF00248 Aldo/keto reductase family M662_15420 PF00563 EAL domain M662_15420 PF03707 Bacterial signalling protein N terminal repeat M662_15420 PF00990 Diguanylate cyclase, GGDEF domain M662_15435 PF05504 Spore germination B3/ GerAC like, C-terminal M662_15440 PF03845 Spore germination protein M662_15445 PF03323 Bacillus/Clostridium GerA spore germination protein M662_15455 PF07690 Major Facilitator Superfamily M662_15460 PF08361 MAATS-type transcriptional repressor, C-terminal region M662_15460 PF00440 Bacterial regulatory proteins, tetR family M662_15465 PF13673 Acetyltransferase (GNAT) domain M662_15465 PF04229 GrpB protein M662_15485 PF00294 pfkB family carbohydrate kinase M662_15490 PF01081 KDPG and KHG aldolase M662_15495 PF00106 short chain dehydrogenase M662_15500 PF03786 D-mannonate dehydratase (UxuA) M662_15505 PF02614 Glucuronate isomerase M662_15510 PF13802 Galactose mutarotase-like M662_15510 PF16338 Domain of unknown function (DUF4968) M662_15510 PF01055 Glycosyl hydrolases family 31 M662_15510 PF17137 Domain of unknown function (DUF5110) M662_15515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M662_15525 PF03480 Bacterial extracellular solute-binding protein, family 7 M662_15530 PF00480 ROK family M662_15535 PF00583 Acetyltransferase (GNAT) family M662_15550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M662_15550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M662_15555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M662_15555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M662_15560 PF00528 Binding-protein-dependent transport system inner membrane component M662_15565 PF00528 Binding-protein-dependent transport system inner membrane component M662_15570 PF01547 Bacterial extracellular solute-binding protein M662_15580 PF00356 Bacterial regulatory proteins, lacI family M662_15615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M662_15615 PF13378 Enolase C-terminal domain-like M662_15620 PF07687 Peptidase dimerisation domain M662_15620 PF01546 Peptidase family M20/M25/M40 M662_15630 PF01380 SIS domain M662_15630 PF01418 Helix-turn-helix domain, rpiR family M662_15665 PF06953 Arsenical resistance operon trans-acting repressor ArsD M662_15670 PF02374 Anion-transporting ATPase M662_15680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M662_15680 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_15695 PF01545 Cation efflux family M662_15695 PF16916 Dimerisation domain of Zinc Transporter M662_15700 PF07563 Protein of unknown function (DUF1541) M662_15705 PF00403 Heavy-metal-associated domain M662_15710 PF00403 Heavy-metal-associated domain M662_15715 PF02583 Metal-sensitive transcriptional repressor M662_15725 PF00465 Iron-containing alcohol dehydrogenase M662_15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M662_15740 PF03466 LysR substrate binding domain M662_15745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M662_15795 PF07859 alpha/beta hydrolase fold M662_15810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M662_15810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M662_15815 PF04299 Putative FMN-binding domain M662_15820 PF00583 Acetyltransferase (GNAT) family M662_15825 PF01047 MarR family M662_15840 PF01037 Lrp/AsnC ligand binding domain M662_15845 PF12706 Beta-lactamase superfamily domain M662_15850 PF10676 Spore germination protein gerPA/gerPF M662_15855 PF13419 Haloacid dehalogenase-like hydrolase M662_15895 PF07690 Major Facilitator Superfamily M662_15910 PF01032 FecCD transport family M662_15915 PF01032 FecCD transport family M662_15920 PF01497 Periplasmic binding protein M662_15950 PF14602 Hexapeptide repeat of succinyl-transferase M662_15950 PF12464 Maltose acetyltransferase M662_15965 PF00144 Beta-lactamase M662_15980 PF01638 HxlR-like helix-turn-helix M662_15985 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M662_15990 PF01380 SIS domain M662_16000 PF01740 STAS domain M662_16000 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain M662_16020 PF12833 Helix-turn-helix domain M662_16020 PF06445 GyrI-like small molecule binding domain M662_16030 PF00440 Bacterial regulatory proteins, tetR family M662_16050 PF00293 NUDIX domain M662_16065 PF12650 Domain of unknown function (DUF3784) M662_16100 PF00561 alpha/beta hydrolase fold M662_16110 PF00375 Sodium:dicarboxylate symporter family M662_16120 PF13460 NAD(P)H-binding M662_16125 PF02082 Transcriptional regulator M662_16130 PF00474 Sodium:solute symporter family M662_16180 PF01048 Phosphorylase superfamily M662_16200 PF01494 FAD binding domain M662_16210 PF00248 Aldo/keto reductase family M662_16215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M662_16215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M662_16220 PF14310 Fibronectin type III-like domain M662_16220 PF00933 Glycosyl hydrolase family 3 N terminal domain M662_16220 PF01915 Glycosyl hydrolase family 3 C-terminal domain M662_16225 PF12833 Helix-turn-helix domain M662_16225 PF02311 AraC-like ligand binding domain M662_16240 PF02652 L-lactate permease M662_16265 PF00356 Bacterial regulatory proteins, lacI family M662_16270 PF01306 LacY proton/sugar symporter M662_16280 PF08244 Glycosyl hydrolases family 32 C terminal M662_16280 PF00251 Glycosyl hydrolases family 32 N-terminal domain M662_16285 PF01547 Bacterial extracellular solute-binding protein M662_16290 PF00528 Binding-protein-dependent transport system inner membrane component M662_16295 PF00528 Binding-protein-dependent transport system inner membrane component M662_16300 PF07662 Na+ dependent nucleoside transporter C-terminus M662_16300 PF07670 Nucleoside recognition M662_16300 PF01773 Na+ dependent nucleoside transporter N-terminus M662_16315 PF00005 ABC transporter M662_16320 PF01032 FecCD transport family M662_16325 PF01032 FecCD transport family M662_16360 PF00700 Bacterial flagellin C-terminal helical region M662_16360 PF00669 Bacterial flagellin N-terminal helical region M662_16365 PF03796 DnaB-like helicase C terminal domain M662_16365 PF00772 DnaB-like helicase N terminal domain M662_16390 PF00171 Aldehyde dehydrogenase family M662_16395 PF01116 Fructose-bisphosphate aldolase class-II M662_16400 PF07702 UTRA domain M662_16400 PF00392 Bacterial regulatory proteins, gntR family M662_16405 PF00365 Phosphofructokinase M662_16415 PF01055 Glycosyl hydrolases family 31 M662_16420 PF00474 Sodium:solute symporter family M662_16435 PF13183 4Fe-4S dicluster domain M662_16435 PF02754 Cysteine-rich domain M662_16440 PF01565 FAD binding domain M662_16440 PF02913 FAD linked oxidases, C-terminal domain M662_16445 PF00171 Aldehyde dehydrogenase family M662_16455 PF01546 Peptidase family M20/M25/M40 M662_16460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M662_16465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M662_16475 PF03480 Bacterial extracellular solute-binding protein, family 7 M662_16480 PF00392 Bacterial regulatory proteins, gntR family M662_16480 PF07729 FCD domain M662_16485 PF10282 Lactonase, 7-bladed beta-propeller M662_16490 PF01381 Helix-turn-helix M662_16505 PF01695 IstB-like ATP binding protein M662_16510 PF00665 Integrase core domain M662_16520 PF01370 NAD dependent epimerase/dehydratase family M662_16525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M662_16525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M662_16525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M662_16530 PF16363 GDP-mannose 4,6 dehydratase M662_16535 PF04321 RmlD substrate binding domain M662_16540 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M662_16545 PF00483 Nucleotidyl transferase M662_16560 PF08759 Glycosyltransferase GT-D fold M662_16560 PF01501 Glycosyl transferase family 8 M662_16570 PF00132 Bacterial transferase hexapeptide (six repeats) M662_16580 PF01370 NAD dependent epimerase/dehydratase family M662_16585 PF02397 Bacterial sugar transferase M662_16590 PF00483 Nucleotidyl transferase M662_16595 PF02719 Polysaccharide biosynthesis protein M662_16605 PF13614 AAA domain M662_16610 PF02706 Chain length determinant protein M662_16610 PF13807 G-rich domain on putative tyrosine kinase M662_16625 PF08239 Bacterial SH3 domain M662_16625 PF00005 ABC transporter M662_16630 PF01061 ABC-2 type transporter M662_16645 PF05159 Capsule polysaccharide biosynthesis protein M662_16650 PF05159 Capsule polysaccharide biosynthesis protein M662_16665 PF00571 CBS domain M662_16665 PF01380 SIS domain M662_16670 PF00793 DAHP synthetase I family M662_16675 PF02348 Cytidylyltransferase M662_16680 PF05159 Capsule polysaccharide biosynthesis protein M662_16705 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M662_16705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M662_16710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M662_16710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M662_16715 PF13439 Glycosyltransferase Family 4 M662_16715 PF00534 Glycosyl transferases group 1 M662_16730 PF03023 Lipid II flippase MurJ M662_16745 PF01520 N-acetylmuramoyl-L-alanine amidase M662_16745 PF08239 Bacterial SH3 domain M662_16750 PF03808 Glycosyl transferase WecB/TagA/CpsF family M662_16755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M662_16755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M662_16755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M662_16765 PF00953 Glycosyl transferase family 4 M662_16775 PF08671 Anti-repressor SinI M662_16775 PF01381 Helix-turn-helix M662_16780 PF02311 AraC-like ligand binding domain M662_16780 PF12833 Helix-turn-helix domain M662_16795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M662_16795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M662_16795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M662_16795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M662_16800 PF01238 Phosphomannose isomerase type I M662_16805 PF02378 Phosphotransferase system, EIIC M662_16805 PF00367 phosphotransferase system, EIIB M662_16810 PF00356 Bacterial regulatory proteins, lacI family M662_16820 PF00742 Homoserine dehydrogenase M662_16820 PF03447 Homoserine dehydrogenase, NAD binding domain M662_16820 PF01842 ACT domain M662_16825 PF00291 Pyridoxal-phosphate dependent enzyme M662_16830 PF08544 GHMP kinases C terminal M662_16830 PF00288 GHMP kinases N terminal domain M662_16865 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M662_16865 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M662_16870 PF02028 BCCT, betaine/carnitine/choline family transporter M662_16885 PF00474 Sodium:solute symporter family M662_16900 PF13539 D-alanyl-D-alanine carboxypeptidase M662_16905 PF01323 DSBA-like thioredoxin domain M662_16925 PF08532 Beta-galactosidase trimerisation domain M662_16925 PF02449 Beta-galactosidase M662_16925 PF08533 Beta-galactosidase C-terminal domain M662_16935 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M662_16935 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M662_16940 PF16363 GDP-mannose 4,6 dehydratase M662_16945 PF00288 GHMP kinases N terminal domain M662_16945 PF08544 GHMP kinases C terminal M662_16945 PF10509 Galactokinase galactose-binding signature M662_16950 PF16874 Glycosyl hydrolase family 36 C-terminal domain M662_16950 PF16875 Glycosyl hydrolase family 36 N-terminal domain M662_16955 PF00480 ROK family M662_16955 PF01325 Iron dependent repressor, N-terminal DNA binding domain M662_16965 PF00480 ROK family M662_16970 PF03816 Cell envelope-related transcriptional attenuator domain M662_16990 PF01451 Low molecular weight phosphotyrosine protein phosphatase M662_16995 PF02040 Arsenical pump membrane protein M662_17000 PF01022 Bacterial regulatory protein, arsR family M662_17005 PF01022 Bacterial regulatory protein, arsR family M662_17010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M662_17025 PF00583 Acetyltransferase (GNAT) family M662_17035 PF00491 Arginase family M662_17040 PF07969 Amidohydrolase family M662_17045 PF17392 Urocanase C-terminal domain M662_17045 PF17391 Urocanase N-terminal domain M662_17045 PF01175 Urocanase Rossmann-like domain M662_17050 PF00221 Aromatic amino acid lyase M662_17060 PF01261 Xylose isomerase-like TIM barrel M662_17065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M662_17065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M662_17070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M662_17070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M662_17080 PF00356 Bacterial regulatory proteins, lacI family M662_17085 PF00528 Binding-protein-dependent transport system inner membrane component M662_17090 PF00528 Binding-protein-dependent transport system inner membrane component M662_17135 PF08671 Anti-repressor SinI M662_17135 PF01381 Helix-turn-helix M662_17155 PF00873 AcrB/AcrD/AcrF family M662_17185 PF07977 FabA-like domain M662_17195 PF02390 Putative methyltransferase M662_17200 PF01494 FAD binding domain M662_17205 PF11772 DNA-directed RNA polymerase subunit beta M662_17210 PF00460 Flagella basal body rod protein M662_17210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M662_17215 PF00460 Flagella basal body rod protein M662_17215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M662_17225 PF12116 Stage III sporulation protein D M662_17230 PF01551 Peptidase family M23 M662_17235 PF08486 Stage II sporulation protein M662_17240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M662_17250 PF06612 Protein of unknown function (DUF1146) M662_17255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M662_17255 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M662_17260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M662_17260 PF02874 ATP synthase alpha/beta family, beta-barrel domain M662_17265 PF00231 ATP synthase M662_17270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M662_17270 PF00306 ATP synthase alpha/beta chain, C terminal domain M662_17270 PF02874 ATP synthase alpha/beta family, beta-barrel domain M662_17275 PF00213 ATP synthase delta (OSCP) subunit M662_17280 PF00430 ATP synthase B/B' CF(0) M662_17285 PF00137 ATP synthase subunit C M662_17290 PF00119 ATP synthase A chain M662_17295 PF03899 ATP synthase I chain M662_17305 PF05922 Peptidase inhibitor I9 M662_17305 PF00082 Subtilase family M662_17305 PF13860 FlgD Ig-like domain M662_17305 PF02225 PA domain M662_17310 PF02350 UDP-N-acetylglucosamine 2-epimerase M662_17320 PF00464 Serine hydroxymethyltransferase M662_17325 PF04260 Protein of unknown function (DUF436) M662_17330 PF02502 Ribose/Galactose Isomerase M662_17335 PF01451 Low molecular weight phosphotyrosine protein phosphatase M662_17340 PF02659 Putative manganese efflux pump M662_17345 PF01300 Telomere recombination M662_17345 PF03481 Putative GTP-binding controlling metal-binding M662_17355 PF09551 Stage II sporulation protein R (spore_II_R) M662_17360 PF17827 PrmC N-terminal domain M662_17360 PF13847 Methyltransferase domain M662_17365 PF00472 RF-1 domain M662_17365 PF03462 PCRF domain M662_17380 PF00265 Thymidine kinase M662_17385 PF01197 Ribosomal protein L31 M662_17390 PF07497 Rho termination factor, RNA-binding domain M662_17390 PF07498 Rho termination factor, N-terminal domain M662_17390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M662_17395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M662_17400 PF00923 Transaldolase/Fructose-6-phosphate aldolase M662_17405 PF01116 Fructose-bisphosphate aldolase class-II M662_17410 PF00072 Response regulator receiver domain M662_17415 PF06418 CTP synthase N-terminus M662_17415 PF00117 Glutamine amidotransferase class-I M662_17420 PF05066 HB1, ASXL, restriction endonuclease HTH domain M662_17430 PF01642 Methylmalonyl-CoA mutase M662_17430 PF02310 B12 binding domain M662_17445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_17445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_17445 PF02770 Acyl-CoA dehydrogenase, middle domain M662_17450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M662_17450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M662_17450 PF02770 Acyl-CoA dehydrogenase, middle domain M662_17455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M662_17455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M662_17460 PF00108 Thiolase, N-terminal domain M662_17460 PF02803 Thiolase, C-terminal domain M662_17465 PF13183 4Fe-4S dicluster domain M662_17465 PF02754 Cysteine-rich domain M662_17470 PF13091 PLD-like domain M662_17480 PF00750 tRNA synthetases class I (R) M662_17480 PF05746 DALR anticodon binding domain M662_17480 PF03485 Arginyl tRNA synthetase N terminal domain M662_17495 PF00491 Arginase family M662_17500 PF17284 Spermidine synthase tetramerisation domain M662_17505 PF00905 Penicillin binding protein transpeptidase domain M662_17505 PF00912 Transglycosylase M662_17510 PF08863 YolD-like protein M662_17515 PF08741 YwhD family M662_17530 PF01966 HD domain M662_17535 PF03099 Biotin/lipoate A/B protein ligase family M662_17550 PF01515 Phosphate acetyl/butaryl transferase M662_17560 PF07486 Cell Wall Hydrolase M662_17565 PF09671 Spore coat protein (Spore_GerQ) M662_17575 PF04241 Protein of unknown function (DUF423) M662_17585 PF00209 Sodium:neurotransmitter symporter family M662_17600 PF03109 ABC1 family M662_17610 PF03881 Fructosamine kinase M662_17630 PF01757 Acyltransferase family M662_17635 PF02073 Thermophilic metalloprotease (M29) M662_17645 PF00885 6,7-dimethyl-8-ribityllumazine synthase M662_17650 PF00925 GTP cyclohydrolase II M662_17650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M662_17655 PF00677 Lumazine binding domain M662_17660 PF01872 RibD C-terminal domain M662_17660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M662_17670 PF16657 Maltogenic Amylase, C-terminal domain M662_17670 PF00128 Alpha amylase, catalytic domain M662_17675 PF02566 OsmC-like protein M662_17690 PF03741 Integral membrane protein TerC family M662_17695 PF01546 Peptidase family M20/M25/M40 M662_17695 PF07687 Peptidase dimerisation domain M662_17700 PF01594 AI-2E family transporter M662_17705 PF07690 Major Facilitator Superfamily M662_17725 PF05525 Branched-chain amino acid transport protein M662_17735 PF14403 Circularly permuted ATP-grasp type 2 M662_17740 PF08240 Alcohol dehydrogenase GroES-like domain M662_17740 PF00107 Zinc-binding dehydrogenase M662_17745 PF00270 DEAD/DEAH box helicase M662_17745 PF09382 RQC domain M662_17745 PF16124 RecQ zinc-binding M662_17745 PF00570 HRDC domain M662_17745 PF00271 Helicase conserved C-terminal domain M662_17750 PF00266 Aminotransferase class-V M662_17755 PF04199 Putative cyclase M662_17760 PF02028 BCCT, betaine/carnitine/choline family transporter M662_17765 PF01593 Flavin containing amine oxidoreductase M662_17780 PF02073 Thermophilic metalloprotease (M29) M662_17785 PF16326 ABC transporter C-terminal domain M662_17785 PF12848 ABC transporter M662_17785 PF00005 ABC transporter M662_17790 PF01235 Sodium:alanine symporter family M662_17795 PF13416 Bacterial extracellular solute-binding protein M662_17805 PF08402 TOBE domain M662_17805 PF00005 ABC transporter M662_17810 PF03061 Thioesterase superfamily M662_17815 PF14827 Double sensory domain of two-component sensor kinase M662_17815 PF00672 HAMP domain M662_17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_17815 PF00512 His Kinase A (phospho-acceptor) domain M662_17815 PF13426 PAS domain M662_17820 PF00072 Response regulator receiver domain M662_17820 PF00486 Transcriptional regulatory protein, C terminal M662_17825 PF13180 PDZ domain M662_17830 PF13091 PLD-like domain M662_17830 PF13396 Phospholipase_D-nuclease N-terminal M662_17835 PF08279 HTH domain M662_17835 PF02829 3H domain M662_17840 PF08244 Glycosyl hydrolases family 32 C terminal M662_17840 PF00251 Glycosyl hydrolases family 32 N-terminal domain M662_17845 PF00294 pfkB family carbohydrate kinase M662_17850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M662_17855 PF01053 Cys/Met metabolism PLP-dependent enzyme M662_17860 PF07690 Major Facilitator Superfamily M662_17870 PF08668 HDOD domain M662_17870 PF00563 EAL domain M662_17875 PF01266 FAD dependent oxidoreductase M662_17875 PF00355 Rieske [2Fe-2S] domain M662_17880 PF00892 EamA-like transporter family M662_17885 PF01593 Flavin containing amine oxidoreductase M662_17890 PF00873 AcrB/AcrD/AcrF family M662_17895 PF00440 Bacterial regulatory proteins, tetR family M662_17910 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) M662_17915 PF01053 Cys/Met metabolism PLP-dependent enzyme M662_17920 PF00561 alpha/beta hydrolase fold M662_17930 PF03301 Tryptophan 2,3-dioxygenase M662_17935 PF13761 Domain of unknown function (DUF4166) M662_17945 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M662_17950 PF00072 Response regulator receiver domain M662_17950 PF00196 Bacterial regulatory proteins, luxR family M662_17955 PF00672 HAMP domain M662_17955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_17955 PF07730 Histidine kinase M662_17965 PF04012 PspA/IM30 family M662_17990 PF00672 HAMP domain M662_17990 PF02743 Cache domain M662_17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_17995 PF01321 Creatinase/Prolidase N-terminal domain M662_17995 PF00557 Metallopeptidase family M24 M662_18005 PF02632 BioY family M662_18010 PF02384 N-6 DNA Methylase M662_18010 PF07669 Eco57I restriction-modification methylase M662_18020 PF13472 GDSL-like Lipase/Acylhydrolase family M662_18030 PF00291 Pyridoxal-phosphate dependent enzyme M662_18035 PF03458 UPF0126 domain M662_18050 PF09844 Uncharacterized conserved protein (COG2071) M662_18055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M662_18060 PF00330 Aconitase family (aconitate hydratase) M662_18065 PF18801 response regulator aspartate phosphatase H, N terminal M662_18075 PF00392 Bacterial regulatory proteins, gntR family M662_18075 PF07702 UTRA domain M662_18080 PF00128 Alpha amylase, catalytic domain M662_18080 PF16657 Maltogenic Amylase, C-terminal domain M662_18085 PF00367 phosphotransferase system, EIIB M662_18085 PF02378 Phosphotransferase system, EIIC M662_18090 PF07690 Major Facilitator Superfamily M662_18095 PF00857 Isochorismatase family M662_18100 PF07690 Major Facilitator Superfamily M662_18110 PF08543 Phosphomethylpyrimidine kinase M662_18115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M662_18125 PF13460 NAD(P)H-binding M662_18130 PF18801 response regulator aspartate phosphatase H, N terminal M662_18135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M662_18135 PF01367 5'-3' exonuclease, C-terminal SAM fold M662_18140 PF00171 Aldehyde dehydrogenase family M662_18150 PF00561 alpha/beta hydrolase fold M662_18165 PF16884 N-terminal domain of oxidoreductase M662_18165 PF00107 Zinc-binding dehydrogenase M662_18170 PF01740 STAS domain M662_18170 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain M662_18180 PF04715 Anthranilate synthase component I, N terminal region M662_18180 PF00425 chorismate binding enzyme M662_18185 PF00117 Glutamine amidotransferase class-I M662_18190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_18190 PF00512 His Kinase A (phospho-acceptor) domain M662_18195 PF00072 Response regulator receiver domain M662_18195 PF02954 Bacterial regulatory protein, Fis family M662_18195 PF00158 Sigma-54 interaction domain M662_18205 PF00483 Nucleotidyl transferase M662_18215 PF00293 NUDIX domain M662_18220 PF00563 EAL domain M662_18220 PF00990 Diguanylate cyclase, GGDEF domain M662_18220 PF03707 Bacterial signalling protein N terminal repeat M662_18225 PF00188 Cysteine-rich secretory protein family M662_18230 PF00271 Helicase conserved C-terminal domain M662_18230 PF00270 DEAD/DEAH box helicase M662_18240 PF03553 Na+/H+ antiporter family M662_18250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M662_18250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M662_18255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M662_18255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M662_18260 PF00117 Glutamine amidotransferase class-I M662_18260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M662_18265 PF00202 Aminotransferase class-III M662_18270 PF00696 Amino acid kinase family M662_18275 PF01960 ArgJ family M662_18280 PF01118 Semialdehyde dehydrogenase, NAD binding domain M662_18280 PF02774 Semialdehyde dehydrogenase, dimerisation domain M662_18285 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M662_18290 PF00583 Acetyltransferase (GNAT) family M662_18305 PF00664 ABC transporter transmembrane region M662_18305 PF00005 ABC transporter M662_18310 PF00005 ABC transporter M662_18310 PF00664 ABC transporter transmembrane region M662_18320 PF01638 HxlR-like helix-turn-helix M662_18325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M662_18325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M662_18335 PF00188 Cysteine-rich secretory protein family M662_18345 PF00248 Aldo/keto reductase family M662_18350 PF02581 Thiamine monophosphate synthase M662_18355 PF02110 Hydroxyethylthiazole kinase family M662_18360 PF08543 Phosphomethylpyrimidine kinase M662_18365 PF03070 TENA/THI-4/PQQC family M662_18380 PF17841 BID domain of Bartonella effector protein (Bep) M662_18380 PF02661 Fic/DOC family M662_18390 PF02735 Ku70/Ku80 beta-barrel domain M662_18395 PF01068 ATP dependent DNA ligase domain M662_18400 PF13193 AMP-binding enzyme C-terminal domain M662_18400 PF00501 AMP-binding enzyme M662_18405 PF02803 Thiolase, C-terminal domain M662_18405 PF00108 Thiolase, N-terminal domain M662_18415 PF01546 Peptidase family M20/M25/M40 M662_18420 PF03180 NLPA lipoprotein M662_18425 PF00528 Binding-protein-dependent transport system inner membrane component M662_18430 PF09383 NIL domain M662_18430 PF00005 ABC transporter M662_18440 PF04239 Protein of unknown function (DUF421) M662_18445 PF02583 Metal-sensitive transcriptional repressor M662_18450 PF13686 DsrE/DsrF/DrsH-like family M662_18455 PF00581 Rhodanese-like domain M662_18460 PF01206 Sulfurtransferase TusA M662_18460 PF00581 Rhodanese-like domain M662_18465 PF00753 Metallo-beta-lactamase superfamily M662_18465 PF00581 Rhodanese-like domain M662_18470 PF01206 Sulfurtransferase TusA M662_18475 PF01925 Sulfite exporter TauE/SafE M662_18480 PF00884 Sulfatase M662_18485 PF02632 BioY family M662_18525 PF01551 Peptidase family M23 M662_18525 PF10145 Phage-related minor tail protein M662_18525 PF01464 Transglycosylase SLT domain M662_18530 PF18075 FtsX extracellular domain M662_18530 PF02687 FtsX-like permease family M662_18540 PF01177 Asp/Glu/Hydantoin racemase M662_18545 PF08245 Mur ligase middle domain M662_18545 PF02875 Mur ligase family, glutamate ligase domain M662_18545 PF01225 Mur ligase family, catalytic domain M662_18550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M662_18550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M662_18550 PF02142 MGS-like domain M662_18555 PF01546 Peptidase family M20/M25/M40 M662_18555 PF07687 Peptidase dimerisation domain M662_18565 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_18565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M662_18570 PF01493 GXGXG motif M662_18570 PF01645 Conserved region in glutamate synthase M662_18570 PF04898 Glutamate synthase central domain M662_18570 PF00310 Glutamine amidotransferases class-II M662_18575 PF03576 Peptidase family S58 M662_18580 PF03631 Virulence factor BrkB M662_18585 PF04552 Sigma-54, DNA binding domain M662_18585 PF00309 Sigma-54 factor, Activator interacting domain (AID) M662_18585 PF04963 Sigma-54 factor, core binding domain M662_18590 PF08000 Bacterial PH domain M662_18595 PF02903 Alpha amylase, N-terminal ig-like domain M662_18595 PF00128 Alpha amylase, catalytic domain M662_18600 PF00343 Carbohydrate phosphorylase M662_18605 PF00534 Glycosyl transferases group 1 M662_18605 PF08323 Starch synthase catalytic domain M662_18610 PF00483 Nucleotidyl transferase M662_18615 PF00483 Nucleotidyl transferase M662_18620 PF02806 Alpha amylase, C-terminal all-beta domain M662_18620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M662_18620 PF00128 Alpha amylase, catalytic domain M662_18640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_18645 PF11066 Protein of unknown function (DUF2867) M662_18645 PF13460 NAD(P)H-binding M662_18655 PF00375 Sodium:dicarboxylate symporter family M662_18660 PF07690 Major Facilitator Superfamily M662_18665 PF03992 Antibiotic biosynthesis monooxygenase M662_18670 PF13556 PucR C-terminal helix-turn-helix domain M662_18670 PF17853 GGDEF-like domain M662_18675 PF00171 Aldehyde dehydrogenase family M662_18680 PF01619 Proline dehydrogenase M662_18685 PF00487 Fatty acid desaturase M662_18690 PF07730 Histidine kinase M662_18695 PF00196 Bacterial regulatory proteins, luxR family M662_18695 PF00072 Response regulator receiver domain M662_18700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M662_18700 PF00672 HAMP domain M662_18700 PF12729 Four helix bundle sensory module for signal transduction M662_18710 PF00701 Dihydrodipicolinate synthetase family M662_18715 PF01063 Amino-transferase class IV M662_18720 PF00486 Transcriptional regulatory protein, C terminal M662_18720 PF00072 Response regulator receiver domain M662_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_18730 PF00005 ABC transporter M662_18775 PF00877 NlpC/P60 family M662_18805 PF12696 TraM recognition site of TraD and TraG M662_18845 PF00072 Response regulator receiver domain M662_18845 PF00486 Transcriptional regulatory protein, C terminal M662_18850 PF00512 His Kinase A (phospho-acceptor) domain M662_18850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_18850 PF16736 Single Cache-like M662_18850 PF00989 PAS fold M662_18860 PF00875 DNA photolyase M662_18860 PF03441 FAD binding domain of DNA photolyase M662_18895 PF04235 Protein of unknown function (DUF418) M662_18900 PF01047 MarR family M662_18905 PF02566 OsmC-like protein M662_18910 PF02525 Flavodoxin-like fold M662_18915 PF07690 Major Facilitator Superfamily M662_18920 PF01743 Poly A polymerase head domain M662_18920 PF00571 CBS domain M662_18925 PF01047 MarR family M662_18930 PF01757 Acyltransferase family M662_18935 PF00578 AhpC/TSA family M662_18940 PF07992 Pyridine nucleotide-disulphide oxidoreductase M662_18940 PF13192 Thioredoxin domain M662_18955 PF01717 Cobalamin-independent synthase, Catalytic domain M662_18965 PF04227 Indigoidine synthase A like protein M662_18970 PF06039 Malate:quinone oxidoreductase (Mqo) M662_18980 PF04172 LrgB-like family M662_18985 PF03788 LrgA family M662_18990 PF00990 Diguanylate cyclase, GGDEF domain M662_18990 PF17151 Periplasmic sensor domain M662_18995 PF00561 alpha/beta hydrolase fold M662_19000 PF03796 DnaB-like helicase C terminal domain M662_19000 PF00772 DnaB-like helicase N terminal domain M662_19015 PF01566 Natural resistance-associated macrophage protein M662_19020 PF12823 Domain of unknown function (DUF3817) M662_19025 PF01565 FAD binding domain M662_19025 PF08031 Berberine and berberine like M662_19085 PF00266 Aminotransferase class-V M662_19095 PF13476 AAA domain M662_19105 PF04851 Type III restriction enzyme, res subunit M662_19105 PF00271 Helicase conserved C-terminal domain M662_19105 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) M662_19105 PF08463 EcoEI R protein C-terminal M662_19125 PF07687 Peptidase dimerisation domain M662_19125 PF01546 Peptidase family M20/M25/M40 M662_19130 PF03606 C4-dicarboxylate anaerobic carrier M662_19155 PF07859 alpha/beta hydrolase fold M662_19160 PF01645 Conserved region in glutamate synthase M662_19165 PF01207 Dihydrouridine synthase (Dus) M662_19170 PF08220 DeoR-like helix-turn-helix domain M662_19170 PF00455 DeoR C terminal sensor domain M662_19175 PF00834 Ribulose-phosphate 3 epimerase family M662_19180 PF01380 SIS domain M662_19185 PF08125 Mannitol dehydrogenase C-terminal domain M662_19185 PF01232 Mannitol dehydrogenase Rossmann domain M662_19190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M662_19195 PF02378 Phosphotransferase system, EIIC M662_19195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M662_19220 PF02517 CPBP intramembrane metalloprotease M662_19225 PF00027 Cyclic nucleotide-binding domain M662_19230 PF12832 MFS_1 like family M662_19235 PF02590 Predicted SPOUT methyltransferase M662_19250 PF02803 Thiolase, C-terminal domain M662_19250 PF00108 Thiolase, N-terminal domain M662_19260 PF01144 Coenzyme A transferase M662_19265 PF01144 Coenzyme A transferase M662_19270 PF02954 Bacterial regulatory protein, Fis family M662_19270 PF13426 PAS domain M662_19270 PF00158 Sigma-54 interaction domain M662_19275 PF16491 CAAX prenyl protease N-terminal, five membrane helices M662_19275 PF01435 Peptidase family M48 M662_19290 PF01235 Sodium:alanine symporter family M662_19295 PF13180 PDZ domain M662_19300 PF00753 Metallo-beta-lactamase superfamily M662_19305 PF09648 YycH protein M662_19315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M662_19315 PF00512 His Kinase A (phospho-acceptor) domain M662_19315 PF13426 PAS domain M662_19315 PF00672 HAMP domain M662_19320 PF00072 Response regulator receiver domain M662_19320 PF00486 Transcriptional regulatory protein, C terminal M662_19330 PF01464 Transglycosylase SLT domain M662_19330 PF10145 Phage-related minor tail protein M662_19330 PF01551 Peptidase family M23 M662_19350 PF03641 Possible lysine decarboxylase M662_19355 PF00709 Adenylosuccinate synthetase M662_19360 PF08220 DeoR-like helix-turn-helix domain M662_19360 PF00455 DeoR C terminal sensor domain M662_19370 PF00772 DnaB-like helicase N terminal domain M662_19370 PF03796 DnaB-like helicase C terminal domain