locus-tag class description DN405_00005 PF00308 Bacterial dnaA protein DN405_00005 PF08299 Bacterial dnaA protein helix-turn-helix DN405_00005 PF11638 DnaA N-terminal domain DN405_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DN405_00010 PF02767 DNA polymerase III beta subunit, central domain DN405_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DN405_00020 PF02463 RecF/RecN/SMC N terminal domain DN405_00025 PF00204 DNA gyrase B DN405_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_00025 PF01751 Toprim domain DN405_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DN405_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DN405_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DN405_00060 PF14175 YaaC-like Protein DN405_00065 PF00478 IMP dehydrogenase / GMP reductase domain DN405_00065 PF00571 CBS domain DN405_00070 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_00070 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_00075 PF01680 SOR/SNZ family DN405_00080 PF01174 SNO glutamine amidotransferase family DN405_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN405_00085 PF02403 Seryl-tRNA synthetase N-terminal domain DN405_00100 PF01712 Deoxynucleoside kinase DN405_00105 PF01712 Deoxynucleoside kinase DN405_00110 PF00857 Isochorismatase family DN405_00120 PF14437 MafB19-like deaminase DN405_00130 PF12169 DNA polymerase III subunits gamma and tau domain III DN405_00135 PF02575 YbaB/EbfC DNA-binding family DN405_00140 PF02132 RecR protein DN405_00140 PF13662 Toprim domain DN405_00145 PF10704 Protein of unknown function (DUF2508) DN405_00150 PF07441 SigmaK-factor processing regulatory protein BofA DN405_00185 PF01276 Orn/Lys/Arg decarboxylase, major domain DN405_00185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN405_00190 PF02223 Thymidylate kinase DN405_00195 PF09115 DNA polymerase III, delta subunit, C terminal DN405_00200 PF04468 PSP1 C-terminal conserved region DN405_00205 PF06156 Initiation control protein YabA DN405_00210 PF05175 Methyltransferase small domain DN405_00215 PF01541 GIY-YIG catalytic domain DN405_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN405_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN405_00225 PF18277 AbrB C-terminal domain DN405_00230 PF01588 Putative tRNA binding domain DN405_00230 PF09334 tRNA synthetases class I (M) DN405_00230 PF08264 Anticodon-binding domain of tRNA DN405_00235 PF01026 TatD related DNase DN405_00240 PF13662 Toprim domain DN405_00240 PF13331 Domain of unknown function (DUF4093) DN405_00245 PF00398 Ribosomal RNA adenine dimethylase DN405_00250 PF05582 YabG peptidase U57 DN405_00255 PF06257 Biofilm formation stimulator VEG DN405_00260 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN405_00265 PF00288 GHMP kinases N terminal domain DN405_00265 PF08544 GHMP kinases C terminal DN405_00270 PF09182 Bacterial purine repressor, N-terminal DN405_00270 PF00156 Phosphoribosyl transferase domain DN405_00275 PF01042 Endoribonuclease L-PSP DN405_00280 PF04026 SpoVG DN405_00285 PF00483 Nucleotidyl transferase DN405_00285 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_00290 PF14572 Phosphoribosyl synthetase-associated domain DN405_00290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN405_00295 PF01195 Peptidyl-tRNA hydrolase DN405_00305 PF02559 CarD-like/TRCF domain DN405_00305 PF00270 DEAD/DEAH box helicase DN405_00305 PF17757 UvrB interaction domain DN405_00305 PF00271 Helicase conserved C-terminal domain DN405_00305 PF03461 TRCF domain DN405_00310 PF15714 Stage V sporulation protein T C-terminal, transcription factor DN405_00310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN405_00315 PF01943 Polysaccharide biosynthesis protein DN405_00315 PF14667 Polysaccharide biosynthesis C-terminal domain DN405_00320 PF03819 MazG nucleotide pyrophosphohydrolase domain DN405_00320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN405_00325 PF01479 S4 domain DN405_00330 PF07873 YabP family DN405_00335 PF09578 Spore cortex protein YabQ (Spore_YabQ) DN405_00345 PF00575 S1 RNA binding domain DN405_00360 PF07228 Stage II sporulation protein E (SpoIIE) DN405_00365 PF09179 TilS substrate binding domain DN405_00365 PF11734 TilS substrate C-terminal domain DN405_00365 PF01171 PP-loop family DN405_00375 PF17862 AAA+ lid domain DN405_00375 PF00004 ATPase family associated with various cellular activities (AAA) DN405_00375 PF01434 Peptidase family M41 DN405_00375 PF06480 FtsH Extracellular DN405_00380 PF03309 Type III pantothenate kinase DN405_00385 PF01430 Hsp33 protein DN405_00390 PF00291 Pyridoxal-phosphate dependent enzyme DN405_00395 PF04715 Anthranilate synthase component I, N terminal region DN405_00395 PF00425 chorismate binding enzyme DN405_00400 PF00117 Glutamine amidotransferase class-I DN405_00405 PF01063 Amino-transferase class IV DN405_00410 PF00809 Pterin binding enzyme DN405_00415 PF02152 Dihydroneopterin aldolase DN405_00420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DN405_00425 PF01381 Helix-turn-helix DN405_00430 PF01207 Dihydrouridine synthase (Dus) DN405_00435 PF00152 tRNA synthetases class II (D, K and N) DN405_00435 PF01336 OB-fold nucleic acid binding domain DN405_00515 PF17727 CtsR C-terminal dimerization domain DN405_00515 PF05848 CtsR N-terminal HTH domain DN405_00520 PF02151 UvrB/uvrC motif DN405_00525 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DN405_00530 PF10431 C-terminal, D2-small domain, of ClpB protein DN405_00530 PF02861 Clp amino terminal domain, pathogenicity island component DN405_00530 PF17871 AAA lid domain DN405_00530 PF07724 AAA domain (Cdc48 subfamily) DN405_00530 PF00004 ATPase family associated with various cellular activities (AAA) DN405_00535 PF18073 Rubredoxin metal binding domain DN405_00540 PF10635 DisA bacterial checkpoint controller linker region DN405_00540 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN405_00550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN405_00555 PF02542 YgbB family DN405_00560 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN405_00565 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_00565 PF06426 Serine acetyltransferase, N-terminal DN405_00570 PF01406 tRNA synthetases class I (C) catalytic domain DN405_00570 PF09190 DALR domain DN405_00575 PF00636 Ribonuclease III domain DN405_00580 PF00588 SpoU rRNA Methylase family DN405_00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN405_00585 PF05991 YacP-like NYN domain DN405_00590 PF08281 Sigma-70, region 4 DN405_00590 PF04542 Sigma-70 region 2 DN405_00595 PF00471 Ribosomal protein L33 DN405_00600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DN405_00605 PF00467 KOW motif DN405_00605 PF02357 Transcription termination factor nusG DN405_00610 PF03946 Ribosomal protein L11, N-terminal domain DN405_00610 PF00298 Ribosomal protein L11, RNA binding domain DN405_00615 PF00687 Ribosomal protein L1p/L10e family DN405_00620 PF00466 Ribosomal protein L10 DN405_00625 PF00542 Ribosomal protein L7/L12 C-terminal domain DN405_00625 PF16320 Ribosomal protein L7/L12 dimerisation domain DN405_00630 PF05175 Methyltransferase small domain DN405_00635 PF04563 RNA polymerase beta subunit DN405_00635 PF04561 RNA polymerase Rpb2, domain 2 DN405_00635 PF04560 RNA polymerase Rpb2, domain 7 DN405_00635 PF00562 RNA polymerase Rpb2, domain 6 DN405_00635 PF10385 RNA polymerase beta subunit external 1 domain DN405_00635 PF04565 RNA polymerase Rpb2, domain 3 DN405_00640 PF04997 RNA polymerase Rpb1, domain 1 DN405_00640 PF04983 RNA polymerase Rpb1, domain 3 DN405_00640 PF05000 RNA polymerase Rpb1, domain 4 DN405_00640 PF04998 RNA polymerase Rpb1, domain 5 DN405_00640 PF00623 RNA polymerase Rpb1, domain 2 DN405_00645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN405_00650 PF00164 Ribosomal protein S12/S23 DN405_00655 PF00177 Ribosomal protein S7p/S5e DN405_00660 PF00679 Elongation factor G C-terminus DN405_00660 PF03764 Elongation factor G, domain IV DN405_00660 PF00009 Elongation factor Tu GTP binding domain DN405_00660 PF03144 Elongation factor Tu domain 2 DN405_00660 PF14492 Elongation Factor G, domain II DN405_00665 PF00009 Elongation factor Tu GTP binding domain DN405_00665 PF03144 Elongation factor Tu domain 2 DN405_00665 PF03143 Elongation factor Tu C-terminal domain DN405_00675 PF00338 Ribosomal protein S10p/S20e DN405_00680 PF00297 Ribosomal protein L3 DN405_00685 PF00573 Ribosomal protein L4/L1 family DN405_00690 PF00276 Ribosomal protein L23 DN405_00695 PF03947 Ribosomal Proteins L2, C-terminal domain DN405_00695 PF00181 Ribosomal Proteins L2, RNA binding domain DN405_00700 PF00203 Ribosomal protein S19 DN405_00705 PF00237 Ribosomal protein L22p/L17e DN405_00710 PF00189 Ribosomal protein S3, C-terminal domain DN405_00710 PF07650 KH domain DN405_00715 PF00252 Ribosomal protein L16p/L10e DN405_00720 PF00831 Ribosomal L29 protein DN405_00725 PF00366 Ribosomal protein S17 DN405_00730 PF00238 Ribosomal protein L14p/L23e DN405_00735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DN405_00735 PF00467 KOW motif DN405_00740 PF00673 ribosomal L5P family C-terminus DN405_00740 PF00281 Ribosomal protein L5 DN405_00745 PF00253 Ribosomal protein S14p/S29e DN405_00750 PF00410 Ribosomal protein S8 DN405_00755 PF00347 Ribosomal protein L6 DN405_00760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DN405_00765 PF03719 Ribosomal protein S5, C-terminal domain DN405_00765 PF00333 Ribosomal protein S5, N-terminal domain DN405_00770 PF00327 Ribosomal protein L30p/L7e DN405_00775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DN405_00780 PF00344 SecY translocase DN405_00785 PF05191 Adenylate kinase, active site lid DN405_00790 PF00557 Metallopeptidase family M24 DN405_00795 PF01176 Translation initiation factor 1A / IF-1 DN405_00800 PF00444 Ribosomal protein L36 DN405_00805 PF00416 Ribosomal protein S13/S18 DN405_00810 PF00411 Ribosomal protein S11 DN405_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN405_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain DN405_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN405_00820 PF01196 Ribosomal protein L17 DN405_00825 PF00005 ABC transporter DN405_00830 PF00005 ABC transporter DN405_00835 PF02361 Cobalt transport protein DN405_00840 PF01416 tRNA pseudouridine synthase DN405_00845 PF00572 Ribosomal protein L13 DN405_00850 PF00380 Ribosomal protein S9/S16 DN405_00860 PF01520 N-acetylmuramoyl-L-alanine amidase DN405_00865 PF10609 NUBPL iron-transfer P-loop NTPase DN405_00870 PF17898 Spore germination GerD central core domain DN405_00875 PF14089 KinB-signalling pathway activation in sporulation DN405_00880 PF01522 Polysaccharide deacetylase DN405_00950 PF02595 Glycerate kinase family DN405_00955 PF00491 Arginase family DN405_00960 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN405_00965 PF07949 YbbR-like protein DN405_00970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN405_00970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN405_00970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN405_00970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN405_00980 PF01380 SIS domain DN405_00990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DN405_00990 PF00326 Prolyl oligopeptidase family DN405_01010 PF00528 Binding-protein-dependent transport system inner membrane component DN405_01015 PF00005 ABC transporter DN405_01015 PF09383 NIL domain DN405_01020 PF03180 NLPA lipoprotein DN405_01025 PF00107 Zinc-binding dehydrogenase DN405_01025 PF08240 Alcohol dehydrogenase GroES-like domain DN405_01035 PF01565 FAD binding domain DN405_01040 PF07690 Major Facilitator Superfamily DN405_01050 PF07690 Major Facilitator Superfamily DN405_01065 PF00528 Binding-protein-dependent transport system inner membrane component DN405_01070 PF00528 Binding-protein-dependent transport system inner membrane component DN405_01070 PF12911 N-terminal TM domain of oligopeptide transport permease C DN405_01075 PF00005 ABC transporter DN405_01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_01080 PF00005 ABC transporter DN405_01085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_01095 PF12833 Helix-turn-helix domain DN405_01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_01115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_01120 PF00248 Aldo/keto reductase family DN405_01125 PF03807 NADP oxidoreductase coenzyme F420-dependent DN405_01125 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN405_01130 PF06800 Sugar transport protein DN405_01135 PF00528 Binding-protein-dependent transport system inner membrane component DN405_01145 PF12728 Helix-turn-helix domain DN405_01145 PF12727 PBP superfamily domain DN405_01155 PF03466 LysR substrate binding domain DN405_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_01160 PF00892 EamA-like transporter family DN405_01165 PF14142 YrzO-like protein DN405_01175 PF01553 Acyltransferase DN405_01185 PF00356 Bacterial regulatory proteins, lacI family DN405_01195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_01195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_01210 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DN405_01230 PF12848 ABC transporter DN405_01230 PF16326 ABC transporter C-terminal domain DN405_01230 PF00005 ABC transporter DN405_01245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_01250 PF00528 Binding-protein-dependent transport system inner membrane component DN405_01260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_01260 PF00005 ABC transporter DN405_01265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_01265 PF00005 ABC transporter DN405_01300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_01305 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN405_01315 PF13520 Amino acid permease DN405_01320 PF07690 Major Facilitator Superfamily DN405_01325 PF01820 D-ala D-ala ligase N-terminus DN405_01325 PF07478 D-ala D-ala ligase C-terminus DN405_01330 PF08245 Mur ligase middle domain DN405_01330 PF02875 Mur ligase family, glutamate ligase domain DN405_01330 PF01225 Mur ligase family, catalytic domain DN405_01335 PF00270 DEAD/DEAH box helicase DN405_01335 PF00271 Helicase conserved C-terminal domain DN405_01340 PF03851 UV-endonuclease UvdE DN405_01345 PF01694 Rhomboid family DN405_01350 PF01648 4'-phosphopantetheinyl transferase superfamily DN405_01360 PF00842 Alanine racemase, C-terminal domain DN405_01360 PF01168 Alanine racemase, N-terminal domain DN405_01365 PF01402 Ribbon-helix-helix protein, copG family DN405_01370 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN405_01375 PF09371 Tex-like protein N-terminal domain DN405_01375 PF00575 S1 RNA binding domain DN405_01375 PF17674 HHH domain DN405_01375 PF16921 Tex protein YqgF-like domain DN405_01385 PF17283 SprT-like zinc ribbon domain DN405_01385 PF10263 SprT-like family DN405_01475 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN405_01480 PF00814 Glycoprotease family DN405_01485 PF00583 Acetyltransferase (GNAT) family DN405_01490 PF00814 Glycoprotease family DN405_01495 PF12848 ABC transporter DN405_01495 PF16326 ABC transporter C-terminal domain DN405_01495 PF00005 ABC transporter DN405_01500 PF06971 Putative DNA-binding protein N-terminus DN405_01500 PF02629 CoA binding domain DN405_01510 PF02517 CPBP intramembrane metalloprotease DN405_01515 PF00166 Chaperonin 10 Kd subunit DN405_01520 PF00118 TCP-1/cpn60 chaperonin family DN405_01525 PF02540 NAD synthase DN405_01525 PF00958 GMP synthase C terminal domain DN405_01525 PF00117 Glutamine amidotransferase class-I DN405_01530 PF00860 Permease family DN405_01535 PF00486 Transcriptional regulatory protein, C terminal DN405_01535 PF00072 Response regulator receiver domain DN405_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_01540 PF00512 His Kinase A (phospho-acceptor) domain DN405_01540 PF00989 PAS fold DN405_01540 PF16736 Single Cache-like DN405_01570 PF01323 DSBA-like thioredoxin domain DN405_01600 PF02673 Bacitracin resistance protein BacA DN405_01610 PF00005 ABC transporter DN405_01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_01615 PF00512 His Kinase A (phospho-acceptor) domain DN405_01620 PF00486 Transcriptional regulatory protein, C terminal DN405_01620 PF00072 Response regulator receiver domain DN405_01640 PF05045 Rhamnan synthesis protein F DN405_01640 PF14307 Glycosyltransferase WbsX DN405_01650 PF08241 Methyltransferase domain DN405_01660 PF01370 NAD dependent epimerase/dehydratase family DN405_01670 PF00535 Glycosyl transferase family 2 DN405_01690 PF00892 EamA-like transporter family DN405_01720 PF00731 AIR carboxylase DN405_01725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DN405_01725 PF02222 ATP-grasp domain DN405_01730 PF10397 Adenylosuccinate lyase C-terminus DN405_01730 PF00206 Lyase DN405_01735 PF01259 SAICAR synthetase DN405_01740 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DN405_01750 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DN405_01750 PF02769 AIR synthase related protein, C-terminal domain DN405_01750 PF00586 AIR synthase related protein, N-terminal domain DN405_01755 PF00156 Phosphoribosyl transferase domain DN405_01760 PF00586 AIR synthase related protein, N-terminal domain DN405_01760 PF02769 AIR synthase related protein, C-terminal domain DN405_01765 PF00551 Formyl transferase DN405_01770 PF02142 MGS-like domain DN405_01770 PF01808 AICARFT/IMPCHase bienzyme DN405_01775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN405_01775 PF02844 Phosphoribosylglycinamide synthetase, N domain DN405_01775 PF02843 Phosphoribosylglycinamide synthetase, C domain DN405_01800 PF01884 PcrB family DN405_01805 PF13361 UvrD-like helicase C-terminal domain DN405_01805 PF00580 UvrD/REP helicase N-terminal domain DN405_01810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DN405_01810 PF12826 Helix-hairpin-helix motif DN405_01810 PF00533 BRCA1 C Terminus (BRCT) domain DN405_01810 PF01653 NAD-dependent DNA ligase adenylation domain DN405_01810 PF03120 NAD-dependent DNA ligase OB-fold domain DN405_01815 PF07537 CamS sex pheromone cAM373 precursor DN405_01820 PF01925 Sulfite exporter TauE/SafE DN405_01825 PF00171 Aldehyde dehydrogenase family DN405_01830 PF00857 Isochorismatase family DN405_01835 PF09383 NIL domain DN405_01835 PF00005 ABC transporter DN405_01840 PF00528 Binding-protein-dependent transport system inner membrane component DN405_01845 PF03180 NLPA lipoprotein DN405_01860 PF17886 HSP20-like domain found in ArsA DN405_01860 PF02374 Anion-transporting ATPase DN405_01865 PF01047 MarR family DN405_01870 PF05360 yiaA/B two helix domain DN405_01875 PF02686 Glu-tRNAGln amidotransferase C subunit DN405_01880 PF01425 Amidase DN405_01885 PF02637 GatB domain DN405_01885 PF02934 GatB/GatE catalytic domain DN405_01890 PF00781 Diacylglycerol kinase catalytic domain DN405_01895 PF13419 Haloacid dehalogenase-like hydrolase DN405_01900 PF00202 Aminotransferase class-III DN405_01905 PF00158 Sigma-54 interaction domain DN405_01910 PF00171 Aldehyde dehydrogenase family DN405_01915 PF00893 Small Multidrug Resistance protein DN405_01925 PF02073 Thermophilic metalloprotease (M29) DN405_01940 PF07670 Nucleoside recognition DN405_01940 PF01773 Na+ dependent nucleoside transporter N-terminus DN405_01940 PF07662 Na+ dependent nucleoside transporter C-terminus DN405_01945 PF01938 TRAM domain DN405_01945 PF05958 tRNA (Uracil-5-)-methyltransferase DN405_01945 PF13847 Methyltransferase domain DN405_01950 PF01207 Dihydrouridine synthase (Dus) DN405_01955 PF07308 Protein of unknown function (DUF1456) DN405_01975 PF13378 Enolase C-terminal domain-like DN405_01975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN405_01990 PF01546 Peptidase family M20/M25/M40 DN405_01990 PF07687 Peptidase dimerisation domain DN405_02000 PF13192 Thioredoxin domain DN405_02000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_02005 PF00578 AhpC/TSA family DN405_02010 PF01636 Phosphotransferase enzyme family DN405_02020 PF00596 Class II Aldolase and Adducin N-terminal domain DN405_02025 PF01032 FecCD transport family DN405_02030 PF01032 FecCD transport family DN405_02035 PF01497 Periplasmic binding protein DN405_02060 PF12728 Helix-turn-helix domain DN405_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_02085 PF00512 His Kinase A (phospho-acceptor) domain DN405_02085 PF00989 PAS fold DN405_02085 PF13188 PAS domain DN405_02085 PF13426 PAS domain DN405_02105 PF10127 RNA repair pathway DNA polymerase beta family DN405_02110 PF07690 Major Facilitator Superfamily DN405_02115 PF00355 Rieske [2Fe-2S] domain DN405_02115 PF01266 FAD dependent oxidoreductase DN405_02125 PF00528 Binding-protein-dependent transport system inner membrane component DN405_02130 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN405_02135 PF00005 ABC transporter DN405_02140 PF12729 Four helix bundle sensory module for signal transduction DN405_02140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_02140 PF00672 HAMP domain DN405_02145 PF02863 Arginine repressor, C-terminal domain DN405_02145 PF01316 Arginine repressor, DNA binding domain DN405_02155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN405_02155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN405_02160 PF13520 Amino acid permease DN405_02165 PF00696 Amino acid kinase family DN405_02170 PF00027 Cyclic nucleotide-binding domain DN405_02170 PF13545 Crp-like helix-turn-helix domain DN405_02180 PF01565 FAD binding domain DN405_02180 PF08031 Berberine and berberine like DN405_02185 PF00128 Alpha amylase, catalytic domain DN405_02185 PF16657 Maltogenic Amylase, C-terminal domain DN405_02190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN405_02190 PF02378 Phosphotransferase system, EIIC DN405_02190 PF00367 phosphotransferase system, EIIB DN405_02195 PF03372 Endonuclease/Exonuclease/phosphatase family DN405_02200 PF01061 ABC-2 type transporter DN405_02205 PF01131 DNA topoisomerase DN405_02205 PF01751 Toprim domain DN405_02210 PF02110 Hydroxyethylthiazole kinase family DN405_02215 PF02581 Thiamine monophosphate synthase DN405_02220 PF03605 Anaerobic c4-dicarboxylate membrane transporter DN405_02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_02225 PF00672 HAMP domain DN405_02230 PF13193 AMP-binding enzyme C-terminal domain DN405_02230 PF00668 Condensation domain DN405_02230 PF00550 Phosphopantetheine attachment site DN405_02230 PF00501 AMP-binding enzyme DN405_02230 PF00975 Thioesterase domain DN405_02235 PF01910 Thiamine-binding protein DN405_02240 PF00528 Binding-protein-dependent transport system inner membrane component DN405_02250 PF00005 ABC transporter DN405_02260 PF00704 Glycosyl hydrolases family 18 DN405_02260 PF00041 Fibronectin type III domain DN405_02285 PF08360 QacR-like protein, C-terminal region DN405_02285 PF00440 Bacterial regulatory proteins, tetR family DN405_02300 PF11700 Vacuole effluxer Atg22 like DN405_02315 PF03129 Anticodon binding domain DN405_02315 PF09180 Prolyl-tRNA synthetase, C-terminal DN405_02315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN405_02330 PF00480 ROK family DN405_02335 PF02342 TerD domain DN405_02340 PF02342 TerD domain DN405_02345 PF02342 TerD domain DN405_02350 PF03741 Integral membrane protein TerC family DN405_02355 PF14266 Putative component of 'biosynthetic module' DN405_02360 PF05816 Toxic anion resistance protein (TelA) DN405_02365 PF00689 Cation transporting ATPase, C-terminus DN405_02365 PF00690 Cation transporter/ATPase, N-terminus DN405_02370 PF06569 Protein of unknown function (DUF1128) DN405_02375 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN405_02385 PF03631 Virulence factor BrkB DN405_02395 PF00892 EamA-like transporter family DN405_02405 PF10502 Signal peptidase, peptidase S26 DN405_02415 PF09335 SNARE associated Golgi protein DN405_02430 PF16242 Pyridoxamine 5'-phosphate oxidase like DN405_02435 PF01699 Sodium/calcium exchanger protein DN405_02440 PF14167 YfkD-like protein DN405_02445 PF04055 Radical SAM superfamily DN405_02445 PF08756 YfkB-like domain DN405_02455 PF05681 Fumarate hydratase (Fumerase) DN405_02455 PF05683 Fumarase C-terminus DN405_02460 PF01522 Polysaccharide deacetylase DN405_02465 PF00730 HhH-GPD superfamily base excision DNA repair protein DN405_02470 PF01938 TRAM domain DN405_02470 PF05958 tRNA (Uracil-5-)-methyltransferase DN405_02475 PF01416 tRNA pseudouridine synthase DN405_02485 PF00158 Sigma-54 interaction domain DN405_02485 PF02954 Bacterial regulatory protein, Fis family DN405_02485 PF13426 PAS domain DN405_02495 PF00324 Amino acid permease DN405_02500 PF01546 Peptidase family M20/M25/M40 DN405_02500 PF07687 Peptidase dimerisation domain DN405_02520 PF04960 Glutaminase DN405_02530 PF00367 phosphotransferase system, EIIB DN405_02530 PF02378 Phosphotransferase system, EIIC DN405_02535 PF00144 Beta-lactamase DN405_02550 PF00535 Glycosyl transferase family 2 DN405_02555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN405_02555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN405_02555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN405_02560 PF00551 Formyl transferase DN405_02560 PF02911 Formyl transferase, C-terminal domain DN405_02560 PF01370 NAD dependent epimerase/dehydratase family DN405_02565 PF00535 Glycosyl transferase family 2 DN405_02575 PF02901 Pyruvate formate lyase-like DN405_02575 PF01228 Glycine radical DN405_02580 PF04055 Radical SAM superfamily DN405_02585 PF04101 Glycosyltransferase family 28 C-terminal domain DN405_02585 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DN405_02600 PF01979 Amidohydrolase family DN405_02605 PF01370 NAD dependent epimerase/dehydratase family DN405_02605 PF08338 Domain of unknown function (DUF1731) DN405_02610 PF02631 RecX family DN405_02625 PF08176 Small acid-soluble spore protein K family DN405_02630 PF14043 WVELL protein DN405_02635 PF04307 LexA-binding, inner membrane-associated putative hydrolase DN405_02640 PF00730 HhH-GPD superfamily base excision DNA repair protein DN405_02640 PF14815 NUDIX domain DN405_02650 PF04259 Small, acid-soluble spore protein, gamma-type DN405_02655 PF14182 YgaB-like protein DN405_02660 PF04167 Protein of unknown function (DUF402) DN405_02665 PF00664 ABC transporter transmembrane region DN405_02665 PF00005 ABC transporter DN405_02670 PF06081 Aromatic acid exporter family member 1 DN405_02675 PF01493 GXGXG motif DN405_02675 PF00310 Glutamine amidotransferases class-II DN405_02675 PF01645 Conserved region in glutamate synthase DN405_02675 PF04898 Glutamate synthase central domain DN405_02680 PF00202 Aminotransferase class-III DN405_02685 PF00005 ABC transporter DN405_02700 PF07885 Ion channel DN405_02705 PF00578 AhpC/TSA family DN405_02710 PF01475 Ferric uptake regulator family DN405_02720 PF11023 Zinc-ribbon containing domain DN405_02820 PF01709 Transcriptional regulator DN405_02825 PF13344 Haloacid dehalogenase-like hydrolase DN405_02825 PF00293 NUDIX domain DN405_02830 PF00905 Penicillin binding protein transpeptidase domain DN405_02830 PF00912 Transglycosylase DN405_02835 PF13462 Thioredoxin DN405_02845 PF08331 Domain of unknown function (DUF1730) DN405_02850 PF12671 Putative amidase domain DN405_02855 PF00588 SpoU rRNA Methylase family DN405_02860 PF03707 Bacterial signalling protein N terminal repeat DN405_02860 PF00990 Diguanylate cyclase, GGDEF domain DN405_02860 PF00563 EAL domain DN405_02865 PF08298 PrkA AAA domain DN405_02865 PF06798 PrkA serine protein kinase C-terminal domain DN405_02870 PF04285 Protein of unknown function (DUF444) DN405_02885 PF02028 BCCT, betaine/carnitine/choline family transporter DN405_02890 PF08453 Peptidase family M9 N-terminal DN405_02890 PF01752 Collagenase DN405_02890 PF18496 Collagenase G catalytic helper subdomain DN405_02900 PF01145 SPFH domain / Band 7 family DN405_02900 PF15975 Flotillin DN405_02905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_02905 PF02743 Cache domain DN405_02905 PF00672 HAMP domain DN405_02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_02910 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN405_02910 PF17203 Single cache domain 3 DN405_02910 PF00989 PAS fold DN405_02915 PF12431 Transcriptional regulator DN405_02915 PF00072 Response regulator receiver domain DN405_02920 PF03600 Citrate transporter DN405_02945 PF04309 Glycerol-3-phosphate responsive antiterminator DN405_02950 PF17912 MalK OB fold domain DN405_02950 PF00005 ABC transporter DN405_02955 PF00528 Binding-protein-dependent transport system inner membrane component DN405_02960 PF00528 Binding-protein-dependent transport system inner membrane component DN405_02965 PF13416 Bacterial extracellular solute-binding protein DN405_02970 PF00149 Calcineurin-like phosphoesterase DN405_02975 PF00072 Response regulator receiver domain DN405_02975 PF00486 Transcriptional regulatory protein, C terminal DN405_02980 PF00672 HAMP domain DN405_02980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_02980 PF00512 His Kinase A (phospho-acceptor) domain DN405_02990 PF13529 Peptidase_C39 like family DN405_02995 PF00672 HAMP domain DN405_02995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_02995 PF02743 Cache domain DN405_03000 PF17203 Single cache domain 3 DN405_03000 PF00989 PAS fold DN405_03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_03000 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN405_03005 PF00072 Response regulator receiver domain DN405_03010 PF03390 2-hydroxycarboxylate transporter family DN405_03015 PF03949 Malic enzyme, NAD binding domain DN405_03015 PF00390 Malic enzyme, N-terminal domain DN405_03025 PF00892 EamA-like transporter family DN405_03030 PF00392 Bacterial regulatory proteins, gntR family DN405_03030 PF00155 Aminotransferase class I and II DN405_03040 PF00989 PAS fold DN405_03040 PF00512 His Kinase A (phospho-acceptor) domain DN405_03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_03040 PF00672 HAMP domain DN405_03040 PF18698 Histidine kinase sensor domain DN405_03045 PF00486 Transcriptional regulatory protein, C terminal DN405_03045 PF00072 Response regulator receiver domain DN405_03050 PF13508 Acetyltransferase (GNAT) domain DN405_03050 PF00583 Acetyltransferase (GNAT) family DN405_03055 PF02634 FdhD/NarQ family DN405_03060 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN405_03060 PF00037 4Fe-4S binding domain DN405_03060 PF01568 Molydopterin dinucleotide binding domain DN405_03060 PF00384 Molybdopterin oxidoreductase DN405_03060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN405_03065 PF07849 Protein of unknown function (DUF1641) DN405_03075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN405_03075 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN405_03080 PF13520 Amino acid permease DN405_03090 PF01022 Bacterial regulatory protein, arsR family DN405_03095 PF00403 Heavy-metal-associated domain DN405_03100 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN405_03100 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DN405_03100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN405_03110 PF03413 Peptidase propeptide and YPEB domain DN405_03110 PF07504 Fungalysin/Thermolysin Propeptide Motif DN405_03110 PF01447 Thermolysin metallopeptidase, catalytic domain DN405_03110 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN405_03130 PF04294 VanW like protein DN405_03135 PF03816 Cell envelope-related transcriptional attenuator domain DN405_03140 PF07662 Na+ dependent nucleoside transporter C-terminus DN405_03140 PF01773 Na+ dependent nucleoside transporter N-terminus DN405_03145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_03150 PF01595 Cyclin M transmembrane N-terminal domain DN405_03150 PF03471 Transporter associated domain DN405_03150 PF00571 CBS domain DN405_03155 PF10415 Fumarase C C-terminus DN405_03155 PF00206 Lyase DN405_03160 PF02652 L-lactate permease DN405_03165 PF01022 Bacterial regulatory protein, arsR family DN405_03170 PF08141 Small acid-soluble spore protein H family DN405_03175 PF00854 POT family DN405_03180 PF01497 Periplasmic binding protein DN405_03185 PF01032 FecCD transport family DN405_03190 PF01032 FecCD transport family DN405_03195 PF00005 ABC transporter DN405_03200 PF08241 Methyltransferase domain DN405_03205 PF00155 Aminotransferase class I and II DN405_03210 PF01370 NAD dependent epimerase/dehydratase family DN405_03215 PF13344 Haloacid dehalogenase-like hydrolase DN405_03215 PF00293 NUDIX domain DN405_03220 PF00092 von Willebrand factor type A domain DN405_03225 PF07728 AAA domain (dynein-related subfamily) DN405_03230 PF13396 Phospholipase_D-nuclease N-terminal DN405_03230 PF13091 PLD-like domain DN405_03240 PF00563 EAL domain DN405_03240 PF00990 Diguanylate cyclase, GGDEF domain DN405_03240 PF03707 Bacterial signalling protein N terminal repeat DN405_03245 PF13520 Amino acid permease DN405_03250 PF00392 Bacterial regulatory proteins, gntR family DN405_03250 PF07702 UTRA domain DN405_03255 PF02378 Phosphotransferase system, EIIC DN405_03255 PF00367 phosphotransferase system, EIIB DN405_03260 PF16657 Maltogenic Amylase, C-terminal domain DN405_03260 PF00128 Alpha amylase, catalytic domain DN405_03275 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_03280 PF01636 Phosphotransferase enzyme family DN405_03285 PF01235 Sodium:alanine symporter family DN405_03295 PF00005 ABC transporter DN405_03300 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN405_03305 PF00528 Binding-protein-dependent transport system inner membrane component DN405_03310 PF00528 Binding-protein-dependent transport system inner membrane component DN405_03315 PF00324 Amino acid permease DN405_03330 PF13280 WYL domain DN405_03330 PF08279 HTH domain DN405_03335 PF01872 RibD C-terminal domain DN405_03340 PF00512 His Kinase A (phospho-acceptor) domain DN405_03340 PF00989 PAS fold DN405_03340 PF00672 HAMP domain DN405_03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_03340 PF18698 Histidine kinase sensor domain DN405_03345 PF00072 Response regulator receiver domain DN405_03345 PF00486 Transcriptional regulatory protein, C terminal DN405_03365 PF01740 STAS domain DN405_03365 PF00916 Sulfate permease family DN405_03370 PF00582 Universal stress protein family DN405_03380 PF07690 Major Facilitator Superfamily DN405_03385 PF01047 MarR family DN405_03390 PF07690 Major Facilitator Superfamily DN405_03395 PF00356 Bacterial regulatory proteins, lacI family DN405_03400 PF00294 pfkB family carbohydrate kinase DN405_03405 PF05025 RbsD / FucU transport protein family DN405_03410 PF00005 ABC transporter DN405_03415 PF02653 Branched-chain amino acid transport system / permease component DN405_03420 PF13407 Periplasmic binding protein domain DN405_03425 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN405_03430 PF05547 Immune inhibitor A peptidase M6 DN405_03445 PF00107 Zinc-binding dehydrogenase DN405_03445 PF08240 Alcohol dehydrogenase GroES-like domain DN405_03455 PF00882 Zinc dependent phospholipase C DN405_03460 PF03372 Endonuclease/Exonuclease/phosphatase family DN405_03490 PF02673 Bacitracin resistance protein BacA DN405_03495 PF02743 Cache domain DN405_03495 PF00672 HAMP domain DN405_03495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_03500 PF03990 G5-linked-Ubiquitin-like domain DN405_03500 PF06725 3D domain DN405_03500 PF07501 G5 domain DN405_03505 PF01381 Helix-turn-helix DN405_03515 PF04203 Sortase domain DN405_03525 PF00854 POT family DN405_03530 PF05525 Branched-chain amino acid transport protein DN405_03545 PF00324 Amino acid permease DN405_03550 PF00860 Permease family DN405_03565 PF13673 Acetyltransferase (GNAT) domain DN405_03575 PF00999 Sodium/hydrogen exchanger family DN405_03575 PF02254 TrkA-N domain DN405_03575 PF02080 TrkA-C domain DN405_03585 PF00510 Cytochrome c oxidase subunit III DN405_03590 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN405_03595 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN405_03600 PF00324 Amino acid permease DN405_03605 PF13529 Peptidase_C39 like family DN405_03610 PF07687 Peptidase dimerisation domain DN405_03610 PF01546 Peptidase family M20/M25/M40 DN405_03615 PF11755 Protein of unknown function (DUF3311) DN405_03620 PF00474 Sodium:solute symporter family DN405_03625 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_03630 PF03845 Spore germination protein DN405_03635 PF05504 Spore germination B3/ GerAC like, C-terminal DN405_03640 PF07664 Ferrous iron transport protein B C terminus DN405_03640 PF17910 FeoB cytosolic helical domain DN405_03640 PF02421 Ferrous iron transport protein B DN405_03640 PF07670 Nucleoside recognition DN405_03645 PF02421 Ferrous iron transport protein B DN405_03645 PF07664 Ferrous iron transport protein B C terminus DN405_03645 PF07670 Nucleoside recognition DN405_03645 PF17910 FeoB cytosolic helical domain DN405_03650 PF02421 Ferrous iron transport protein B DN405_03650 PF07664 Ferrous iron transport protein B C terminus DN405_03650 PF17910 FeoB cytosolic helical domain DN405_03650 PF07670 Nucleoside recognition DN405_03650 PF04023 FeoA domain DN405_03655 PF12849 PBP superfamily domain DN405_03660 PF00528 Binding-protein-dependent transport system inner membrane component DN405_03665 PF00528 Binding-protein-dependent transport system inner membrane component DN405_03675 PF00873 AcrB/AcrD/AcrF family DN405_03795 PF00571 CBS domain DN405_03810 PF08239 Bacterial SH3 domain DN405_03810 PF00246 Zinc carboxypeptidase DN405_03815 PF03070 TENA/THI-4/PQQC family DN405_03820 PF00005 ABC transporter DN405_03825 PF00528 Binding-protein-dependent transport system inner membrane component DN405_03830 PF09084 NMT1/THI5 like DN405_03835 PF02581 Thiamine monophosphate synthase DN405_03840 PF01266 FAD dependent oxidoreductase DN405_03845 PF02597 ThiS family DN405_03850 PF05690 Thiazole biosynthesis protein ThiG DN405_03855 PF00899 ThiF family DN405_03860 PF08543 Phosphomethylpyrimidine kinase DN405_03885 PF03814 Potassium-transporting ATPase A subunit DN405_03895 PF02669 K+-transporting ATPase, c chain DN405_03900 PF02702 Osmosensitive K+ channel His kinase sensor domain DN405_03905 PF07690 Major Facilitator Superfamily DN405_03910 PF01047 MarR family DN405_03920 PF00860 Permease family DN405_03930 PF17969 L,D-transpeptidase C-terminal domain DN405_03930 PF03734 L,D-transpeptidase catalytic domain DN405_03940 PF00294 pfkB family carbohydrate kinase DN405_03945 PF08244 Glycosyl hydrolases family 32 C terminal DN405_03945 PF00251 Glycosyl hydrolases family 32 N-terminal domain DN405_03950 PF00367 phosphotransferase system, EIIB DN405_03950 PF02378 Phosphotransferase system, EIIC DN405_03955 PF00356 Bacterial regulatory proteins, lacI family DN405_03955 PF13407 Periplasmic binding protein domain DN405_03965 PF00085 Thioredoxin DN405_03970 PF02600 Disulfide bond formation protein DsbB DN405_03975 PF14148 YhdB-like protein DN405_03985 PF03845 Spore germination protein DN405_03995 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_04005 PF00881 Nitroreductase family DN405_04010 PF04293 SpoVR like protein DN405_04020 PF00089 Trypsin DN405_04045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN405_04045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_04050 PF02583 Metal-sensitive transcriptional repressor DN405_04055 PF01206 Sulfurtransferase TusA DN405_04055 PF00581 Rhodanese-like domain DN405_04060 PF00753 Metallo-beta-lactamase superfamily DN405_04060 PF00581 Rhodanese-like domain DN405_04065 PF01206 Sulfurtransferase TusA DN405_04070 PF01206 Sulfurtransferase TusA DN405_04070 PF00581 Rhodanese-like domain DN405_04075 PF00581 Rhodanese-like domain DN405_04080 PF13686 DsrE/DsrF/DrsH-like family DN405_04085 PF01925 Sulfite exporter TauE/SafE DN405_04095 PF03816 Cell envelope-related transcriptional attenuator domain DN405_04100 PF08240 Alcohol dehydrogenase GroES-like domain DN405_04100 PF00107 Zinc-binding dehydrogenase DN405_04105 PF02690 Na+/Pi-cotransporter DN405_04110 PF07690 Major Facilitator Superfamily DN405_04125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN405_04125 PF00874 PRD domain DN405_04125 PF05043 Mga helix-turn-helix domain DN405_04125 PF08279 HTH domain DN405_04130 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN405_04135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN405_04140 PF02378 Phosphotransferase system, EIIC DN405_04160 PF06725 3D domain DN405_04160 PF01476 LysM domain DN405_04165 PF02687 FtsX-like permease family DN405_04165 PF12704 MacB-like periplasmic core domain DN405_04170 PF00005 ABC transporter DN405_04180 PF09529 Integral membrane protein (intg_mem_TP0381) DN405_04195 PF05525 Branched-chain amino acid transport protein DN405_04200 PF05067 Manganese containing catalase DN405_04205 PF12652 CotJB protein DN405_04210 PF11007 Spore coat associated protein JA (CotJA) DN405_04225 PF02735 Ku70/Ku80 beta-barrel domain DN405_04235 PF09335 SNARE associated Golgi protein DN405_04265 PF13520 Amino acid permease DN405_04270 PF00999 Sodium/hydrogen exchanger family DN405_04280 PF01418 Helix-turn-helix domain, rpiR family DN405_04280 PF01380 SIS domain DN405_04285 PF13580 SIS domain DN405_04290 PF02378 Phosphotransferase system, EIIC DN405_04290 PF00367 phosphotransferase system, EIIB DN405_04300 PF07681 DoxX DN405_04315 PF00892 EamA-like transporter family DN405_04320 PF01037 Lrp/AsnC ligand binding domain DN405_04325 PF00583 Acetyltransferase (GNAT) family DN405_04325 PF14698 Argininosuccinate lyase C-terminal DN405_04325 PF00206 Lyase DN405_04330 PF00106 short chain dehydrogenase DN405_04335 PF13411 MerR HTH family regulatory protein DN405_04345 PF00893 Small Multidrug Resistance protein DN405_04355 PF00440 Bacterial regulatory proteins, tetR family DN405_04355 PF17934 Tetracyclin repressor-like, C-terminal domain DN405_04360 PF07690 Major Facilitator Superfamily DN405_04365 PF01638 HxlR-like helix-turn-helix DN405_04375 PF02525 Flavodoxin-like fold DN405_04380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_04380 PF12793 Sugar transport-related sRNA regulator N-term DN405_04385 PF07690 Major Facilitator Superfamily DN405_04405 PF13520 Amino acid permease DN405_04420 PF00171 Aldehyde dehydrogenase family DN405_04435 PF00005 ABC transporter DN405_04435 PF00664 ABC transporter transmembrane region DN405_04440 PF00664 ABC transporter transmembrane region DN405_04440 PF00005 ABC transporter DN405_04450 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN405_04455 PF00528 Binding-protein-dependent transport system inner membrane component DN405_04460 PF00005 ABC transporter DN405_04465 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN405_04475 PF14398 YheC/D like ATP-grasp DN405_04485 PF04286 Protein of unknown function (DUF445) DN405_04490 PF06133 Control of competence regulator ComK, YlbF/YmcA DN405_04505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN405_04505 PF00205 Thiamine pyrophosphate enzyme, central domain DN405_04505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN405_04510 PF03306 Alpha-acetolactate decarboxylase DN405_04520 PF02245 Methylpurine-DNA glycosylase (MPG) DN405_04530 PF04650 YSIRK type signal peptide DN405_04530 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DN405_04530 PF17210 SdrD B-like domain DN405_04530 PF00746 LPXTG cell wall anchor motif DN405_04530 PF17961 Bacterial Ig domain DN405_04535 PF01471 Putative peptidoglycan binding domain DN405_04535 PF01510 N-acetylmuramoyl-L-alanine amidase DN405_04540 PF04055 Radical SAM superfamily DN405_04545 PF13193 AMP-binding enzyme C-terminal domain DN405_04545 PF00501 AMP-binding enzyme DN405_04560 PF01740 STAS domain DN405_04560 PF00916 Sulfate permease family DN405_04565 PF01943 Polysaccharide biosynthesis protein DN405_04565 PF14667 Polysaccharide biosynthesis C-terminal domain DN405_04590 PF00378 Enoyl-CoA hydratase/isomerase DN405_04610 PF05343 M42 glutamyl aminopeptidase DN405_04615 PF00395 S-layer homology domain DN405_04615 PF01520 N-acetylmuramoyl-L-alanine amidase DN405_04625 PF11121 Protein of unknown function (DUF2639) DN405_04630 PF05544 Proline racemase DN405_04635 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN405_04640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_04645 PF00528 Binding-protein-dependent transport system inner membrane component DN405_04650 PF12911 N-terminal TM domain of oligopeptide transport permease C DN405_04650 PF00528 Binding-protein-dependent transport system inner membrane component DN405_04655 PF00005 ABC transporter DN405_04655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_04660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_04660 PF00005 ABC transporter DN405_04670 PF00753 Metallo-beta-lactamase superfamily DN405_04670 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN405_04690 PF00083 Sugar (and other) transporter DN405_04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_04695 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN405_04700 PF12431 Transcriptional regulator DN405_04700 PF00072 Response regulator receiver domain DN405_04700 PF08279 HTH domain DN405_04705 PF03401 Tripartite tricarboxylate transporter family receptor DN405_04710 PF02342 TerD domain DN405_04740 PF06445 GyrI-like small molecule binding domain DN405_04740 PF13411 MerR HTH family regulatory protein DN405_04755 PF00772 DnaB-like helicase N terminal domain DN405_04755 PF03796 DnaB-like helicase C terminal domain DN405_04765 PF01925 Sulfite exporter TauE/SafE DN405_04780 PF07690 Major Facilitator Superfamily DN405_04790 PF09680 Family of unknown function DN405_04795 PF13302 Acetyltransferase (GNAT) domain DN405_04820 PF12146 Serine aminopeptidase, S33 DN405_04820 PF13026 Protein of unknown function (DUF3887) DN405_04860 PF01066 CDP-alcohol phosphatidyltransferase DN405_04880 PF02733 Dak1 domain DN405_04895 PF02733 Dak1 domain DN405_04935 PF00395 S-layer homology domain DN405_04955 PF12697 Alpha/beta hydrolase family DN405_04995 PF11181 Heat induced stress protein YflT DN405_05015 PF01740 STAS domain DN405_05020 PF13581 Histidine kinase-like ATPase domain DN405_05025 PF04542 Sigma-70 region 2 DN405_05025 PF04539 Sigma-70 region 3 DN405_05025 PF04545 Sigma-70, region 4 DN405_05035 PF07228 Stage II sporulation protein E (SpoIIE) DN405_05035 PF13426 PAS domain DN405_05040 PF03705 CheR methyltransferase, all-alpha domain DN405_05040 PF01739 CheR methyltransferase, SAM binding domain DN405_05045 PF00672 HAMP domain DN405_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_05045 PF00512 His Kinase A (phospho-acceptor) domain DN405_05045 PF01627 Hpt domain DN405_05045 PF00072 Response regulator receiver domain DN405_05045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DN405_05065 PF01906 Putative heavy-metal-binding DN405_05075 PF08240 Alcohol dehydrogenase GroES-like domain DN405_05075 PF00107 Zinc-binding dehydrogenase DN405_05080 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DN405_05085 PF11121 Protein of unknown function (DUF2639) DN405_05100 PF00149 Calcineurin-like phosphoesterase DN405_05105 PF13514 AAA domain DN405_05110 PF01966 HD domain DN405_05110 PF01336 OB-fold nucleic acid binding domain DN405_05115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_05120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_05125 PF17874 MalT-like TPR region DN405_05125 PF18801 response regulator aspartate phosphatase H, N terminal DN405_05140 PF08386 TAP-like protein DN405_05140 PF00561 alpha/beta hydrolase fold DN405_05145 PF14147 Sporulation protein YhaL DN405_05155 PF00190 Cupin DN405_05160 PF01381 Helix-turn-helix DN405_05165 PF04309 Glycerol-3-phosphate responsive antiterminator DN405_05170 PF00230 Major intrinsic protein DN405_05175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN405_05175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN405_05180 PF01266 FAD dependent oxidoreductase DN405_05180 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DN405_05185 PF03551 Transcriptional regulator PadR-like family DN405_05195 PF08281 Sigma-70, region 4 DN405_05195 PF04542 Sigma-70 region 2 DN405_05215 PF03176 MMPL family DN405_05220 PF13538 UvrD-like helicase C-terminal domain DN405_05250 PF01047 MarR family DN405_05255 PF12732 YtxH-like protein DN405_05260 PF01230 HIT domain DN405_05265 PF00005 ABC transporter DN405_05270 PF05975 Bacterial ABC transporter protein EcsB DN405_05275 PF12787 EcsC protein family DN405_05290 PF03703 Bacterial PH domain DN405_05295 PF03703 Bacterial PH domain DN405_05325 PF10014 2OG-Fe dioxygenase DN405_05335 PF00892 EamA-like transporter family DN405_05340 PF03703 Bacterial PH domain DN405_05345 PF03703 Bacterial PH domain DN405_05350 PF03992 Antibiotic biosynthesis monooxygenase DN405_05355 PF00912 Transglycosylase DN405_05355 PF00905 Penicillin binding protein transpeptidase domain DN405_05360 PF01208 Uroporphyrinogen decarboxylase (URO-D) DN405_05395 PF17932 Tetracyclin repressor-like, C-terminal domain DN405_05395 PF00440 Bacterial regulatory proteins, tetR family DN405_05430 PF13302 Acetyltransferase (GNAT) domain DN405_05435 PF00356 Bacterial regulatory proteins, lacI family DN405_05440 PF14149 YhfH-like protein DN405_05445 PF12706 Beta-lactamase superfamily domain DN405_05450 PF10437 Bacterial lipoate protein ligase C-terminus DN405_05450 PF03099 Biotin/lipoate A/B protein ligase family DN405_05460 PF00501 AMP-binding enzyme DN405_05460 PF13193 AMP-binding enzyme C-terminal domain DN405_05465 PF00395 S-layer homology domain DN405_05465 PF01520 N-acetylmuramoyl-L-alanine amidase DN405_05475 PF00528 Binding-protein-dependent transport system inner membrane component DN405_05480 PF00528 Binding-protein-dependent transport system inner membrane component DN405_05485 PF00005 ABC transporter DN405_05485 PF17850 CysA C-terminal regulatory domain DN405_05485 PF12857 TOBE-like domain DN405_05550 PF07968 Leukocidin/Hemolysin toxin family DN405_05560 PF00149 Calcineurin-like phosphoesterase DN405_05565 PF01966 HD domain DN405_05575 PF04542 Sigma-70 region 2 DN405_05575 PF08281 Sigma-70, region 4 DN405_05580 PF12833 Helix-turn-helix domain DN405_05580 PF06445 GyrI-like small molecule binding domain DN405_05585 PF00512 His Kinase A (phospho-acceptor) domain DN405_05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_05590 PF00072 Response regulator receiver domain DN405_05590 PF00486 Transcriptional regulatory protein, C terminal DN405_05610 PF16491 CAAX prenyl protease N-terminal, five membrane helices DN405_05610 PF01435 Peptidase family M48 DN405_05615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_05615 PF02743 Cache domain DN405_05615 PF00672 HAMP domain DN405_05620 PF00395 S-layer homology domain DN405_05620 PF00331 Glycosyl hydrolase family 10 DN405_05620 PF02018 Carbohydrate binding domain DN405_05620 PF06452 Carbohydrate family 9 binding domain-like DN405_05630 PF01274 Malate synthase DN405_05635 PF00463 Isocitrate lyase family DN405_05650 PF00313 'Cold-shock' DNA-binding domain DN405_05670 PF09335 SNARE associated Golgi protein DN405_05675 PF10502 Signal peptidase, peptidase S26 DN405_05680 PF13361 UvrD-like helicase C-terminal domain DN405_05680 PF12705 PD-(D/E)XK nuclease superfamily DN405_05685 PF00580 UvrD/REP helicase N-terminal domain DN405_05685 PF13361 UvrD-like helicase C-terminal domain DN405_05685 PF12705 PD-(D/E)XK nuclease superfamily DN405_05695 PF10676 Spore germination protein gerPA/gerPF DN405_05700 PF10970 Spore germination protein GerPE DN405_05710 PF10737 Spore germination protein GerPC DN405_05715 PF10803 Spore germination GerPB DN405_05720 PF10676 Spore germination protein gerPA/gerPF DN405_05725 PF09388 Spo0E like sporulation regulatory protein DN405_05730 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN405_05740 PF00202 Aminotransferase class-III DN405_05745 PF07457 Protein of unknown function (DUF1516) DN405_05755 PF13537 Glutamine amidotransferase domain DN405_05755 PF00733 Asparagine synthase DN405_05765 PF00199 Catalase DN405_05765 PF06628 Catalase-related immune-responsive DN405_05770 PF00909 Ammonium Transporter Family DN405_05775 PF00128 Alpha amylase, catalytic domain DN405_05790 PF04461 Protein of unknown function (DUF520) DN405_05795 PF13509 S1 domain DN405_05795 PF17783 CvfB-like winged helix domain DN405_05810 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_05810 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_05815 PF12758 Protein of unknown function (DUF3813) DN405_05830 PF14168 YjzC-like protein DN405_05835 PF02861 Clp amino terminal domain, pathogenicity island component DN405_05835 PF17871 AAA lid domain DN405_05835 PF10431 C-terminal, D2-small domain, of ClpB protein DN405_05835 PF00004 ATPase family associated with various cellular activities (AAA) DN405_05835 PF07724 AAA domain (Cdc48 subfamily) DN405_05855 PF10815 ComZ DN405_05860 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN405_05860 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN405_05865 PF00109 Beta-ketoacyl synthase, N-terminal domain DN405_05865 PF02801 Beta-ketoacyl synthase, C-terminal domain DN405_05870 PF10026 Predicted Zn-dependent protease (DUF2268) DN405_05875 PF12227 Protein of unknown function (DUF3603) DN405_05885 PF00579 tRNA synthetases class I (W and Y) DN405_05900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_05905 PF00528 Binding-protein-dependent transport system inner membrane component DN405_05910 PF12911 N-terminal TM domain of oligopeptide transport permease C DN405_05910 PF00528 Binding-protein-dependent transport system inner membrane component DN405_05915 PF00005 ABC transporter DN405_05915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_05920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN405_05920 PF00005 ABC transporter DN405_05925 PF01554 MatE DN405_05930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_05940 PF03960 ArsC family DN405_05945 PF03741 Integral membrane protein TerC family DN405_05950 PF05389 Negative regulator of genetic competence (MecA) DN405_05955 PF13091 PLD-like domain DN405_05955 PF13396 Phospholipase_D-nuclease N-terminal DN405_05965 PF01432 Peptidase family M3 DN405_05965 PF08439 Oligopeptidase F DN405_05975 PF01152 Bacterial-like globin DN405_05980 PF01928 CYTH domain DN405_05990 PF04607 Region found in RelA / SpoT proteins DN405_05995 PF01513 ATP-NAD kinase DN405_06000 PF00849 RNA pseudouridylate synthase DN405_06010 PF00149 Calcineurin-like phosphoesterase DN405_06015 PF01098 Cell cycle protein DN405_06020 PF00535 Glycosyl transferase family 2 DN405_06025 PF08241 Methyltransferase domain DN405_06030 PF05711 Macrocin-O-methyltransferase (TylF) DN405_06040 PF13181 Tetratricopeptide repeat DN405_06040 PF00535 Glycosyl transferase family 2 DN405_06060 PF00483 Nucleotidyl transferase DN405_06065 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DN405_06070 PF16363 GDP-mannose 4,6 dehydratase DN405_06075 PF04321 RmlD substrate binding domain DN405_06095 PF07098 Protein of unknown function (DUF1360) DN405_06115 PF00580 UvrD/REP helicase N-terminal domain DN405_06115 PF13361 UvrD-like helicase C-terminal domain DN405_06120 PF13673 Acetyltransferase (GNAT) domain DN405_06130 PF00756 Putative esterase DN405_06150 PF02368 Bacterial Ig-like domain (group 2) DN405_06155 PF00474 Sodium:solute symporter family DN405_06170 PF00117 Glutamine amidotransferase class-I DN405_06170 PF00591 Glycosyl transferase family, a/b domain DN405_06170 PF02885 Glycosyl transferase family, helical bundle domain DN405_06175 PF02885 Glycosyl transferase family, helical bundle domain DN405_06175 PF00591 Glycosyl transferase family, a/b domain DN405_06180 PF00218 Indole-3-glycerol phosphate synthase DN405_06185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DN405_06190 PF00291 Pyridoxal-phosphate dependent enzyme DN405_06195 PF00290 Tryptophan synthase alpha chain DN405_06205 PF02652 L-lactate permease DN405_06210 PF10042 Uncharacterized conserved protein (DUF2278) DN405_06235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN405_06235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_06245 PF00881 Nitroreductase family DN405_06260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN405_06260 PF00364 Biotin-requiring enzyme DN405_06260 PF02817 e3 binding domain DN405_06265 PF00676 Dehydrogenase E1 component DN405_06265 PF16870 2-oxoglutarate dehydrogenase C-terminal DN405_06265 PF02779 Transketolase, pyrimidine binding domain DN405_06270 PF01381 Helix-turn-helix DN405_06330 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_06330 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_06340 PF12389 Camelysin metallo-endopeptidase DN405_06350 PF12389 Camelysin metallo-endopeptidase DN405_06355 PF08671 Anti-repressor SinI DN405_06355 PF01381 Helix-turn-helix DN405_06365 PF05547 Immune inhibitor A peptidase M6 DN405_06370 PF00171 Aldehyde dehydrogenase family DN405_06375 PF00005 ABC transporter DN405_06375 PF08402 TOBE domain DN405_06380 PF00528 Binding-protein-dependent transport system inner membrane component DN405_06385 PF00528 Binding-protein-dependent transport system inner membrane component DN405_06390 PF13416 Bacterial extracellular solute-binding protein DN405_06395 PF01569 PAP2 superfamily DN405_06400 PF03176 MMPL family DN405_06410 PF01479 S4 domain DN405_06410 PF00849 RNA pseudouridylate synthase DN405_06420 PF00188 Cysteine-rich secretory protein family DN405_06425 PF13183 4Fe-4S dicluster domain DN405_06425 PF02754 Cysteine-rich domain DN405_06430 PF01565 FAD binding domain DN405_06430 PF02913 FAD linked oxidases, C-terminal domain DN405_06435 PF13556 PucR C-terminal helix-turn-helix domain DN405_06435 PF17853 GGDEF-like domain DN405_06435 PF05651 Putative sugar diacid recognition DN405_06445 PF00072 Response regulator receiver domain DN405_06445 PF00486 Transcriptional regulatory protein, C terminal DN405_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_06450 PF00672 HAMP domain DN405_06450 PF18698 Histidine kinase sensor domain DN405_06450 PF00512 His Kinase A (phospho-acceptor) domain DN405_06450 PF00989 PAS fold DN405_06455 PF00392 Bacterial regulatory proteins, gntR family DN405_06455 PF07729 FCD domain DN405_06460 PF02754 Cysteine-rich domain DN405_06465 PF13183 4Fe-4S dicluster domain DN405_06465 PF11870 Domain of unknown function (DUF3390) DN405_06465 PF02589 LUD domain DN405_06470 PF02589 LUD domain DN405_06475 PF06750 Bacterial Peptidase A24 N-terminal domain DN405_06475 PF01478 Type IV leader peptidase family DN405_06485 PF01226 Formate/nitrite transporter DN405_06490 PF03741 Integral membrane protein TerC family DN405_06495 PF02386 Cation transport protein DN405_06500 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN405_06505 PF01575 MaoC like domain DN405_06530 PF00561 alpha/beta hydrolase fold DN405_06540 PF02386 Cation transport protein DN405_06560 PF00005 ABC transporter DN405_06560 PF08402 TOBE domain DN405_06565 PF00528 Binding-protein-dependent transport system inner membrane component DN405_06570 PF13419 Haloacid dehalogenase-like hydrolase DN405_06575 PF00266 Aminotransferase class-V DN405_06585 PF00455 DeoR C terminal sensor domain DN405_06585 PF08220 DeoR-like helix-turn-helix domain DN405_06595 PF00596 Class II Aldolase and Adducin N-terminal domain DN405_06605 PF04748 Divergent polysaccharide deacetylase DN405_06610 PF09388 Spo0E like sporulation regulatory protein DN405_06615 PF02743 Cache domain DN405_06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_06615 PF00512 His Kinase A (phospho-acceptor) domain DN405_06620 PF01047 MarR family DN405_06630 PF12867 DinB superfamily DN405_06635 PF13188 PAS domain DN405_06635 PF00989 PAS fold DN405_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_06635 PF13426 PAS domain DN405_06635 PF00512 His Kinase A (phospho-acceptor) domain DN405_06640 PF06508 Queuosine biosynthesis protein QueC DN405_06645 PF01242 6-pyruvoyl tetrahydropterin synthase DN405_06650 PF04055 Radical SAM superfamily DN405_06655 PF14489 QueF-like protein DN405_06660 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DN405_06690 PF07972 NrdI Flavodoxin like DN405_06695 PF08343 Ribonucleotide reductase N-terminal DN405_06695 PF00317 Ribonucleotide reductase, all-alpha domain DN405_06695 PF02867 Ribonucleotide reductase, barrel domain DN405_06700 PF00268 Ribonucleotide reductase, small chain DN405_06705 PF00392 Bacterial regulatory proteins, gntR family DN405_06710 PF00005 ABC transporter DN405_06720 PF00005 ABC transporter DN405_06740 PF01037 Lrp/AsnC ligand binding domain DN405_06750 PF00857 Isochorismatase family DN405_06760 PF02016 LD-carboxypeptidase N-terminal domain DN405_06760 PF17676 LD-carboxypeptidase C-terminal domain DN405_06765 PF03060 Nitronate monooxygenase DN405_06770 PF04914 DltD protein DN405_06775 PF00550 Phosphopantetheine attachment site DN405_06780 PF03062 MBOAT, membrane-bound O-acyltransferase family DN405_06785 PF00501 AMP-binding enzyme DN405_06785 PF13193 AMP-binding enzyme C-terminal domain DN405_06795 PF07687 Peptidase dimerisation domain DN405_06795 PF01546 Peptidase family M20/M25/M40 DN405_06800 PF00258 Flavodoxin DN405_06825 PF01554 MatE DN405_06830 PF02673 Bacitracin resistance protein BacA DN405_06845 PF01047 MarR family DN405_06855 PF00375 Sodium:dicarboxylate symporter family DN405_06860 PF02386 Cation transport protein DN405_06870 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN405_06880 PF03698 Uncharacterised protein family (UPF0180) DN405_06890 PF01063 Amino-transferase class IV DN405_06895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN405_06895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN405_06895 PF00205 Thiamine pyrophosphate enzyme, central domain DN405_06900 PF10369 Small subunit of acetolactate synthase DN405_06900 PF01842 ACT domain DN405_06905 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN405_06905 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN405_06910 PF00682 HMGL-like DN405_06910 PF08502 LeuA allosteric (dimerisation) domain DN405_06915 PF00180 Isocitrate/isopropylmalate dehydrogenase DN405_06920 PF00330 Aconitase family (aconitate hydratase) DN405_06925 PF00694 Aconitase C-terminal domain DN405_06930 PF13393 Histidyl-tRNA synthetase DN405_06935 PF01634 ATP phosphoribosyltransferase DN405_06940 PF00815 Histidinol dehydrogenase DN405_06945 PF00475 Imidazoleglycerol-phosphate dehydratase DN405_06950 PF00117 Glutamine amidotransferase class-I DN405_06955 PF00977 Histidine biosynthesis protein DN405_06960 PF00977 Histidine biosynthesis protein DN405_06965 PF01502 Phosphoribosyl-AMP cyclohydrolase DN405_06970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DN405_06975 PF02811 PHP domain DN405_06985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN405_06985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN405_06990 PF01066 CDP-alcohol phosphatidyltransferase DN405_06995 PF00884 Sulfatase DN405_07005 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN405_07005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN405_07015 PF01507 Phosphoadenosine phosphosulfate reductase family DN405_07020 PF14306 PUA-like domain DN405_07020 PF01747 ATP-sulfurylase DN405_07030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN405_07030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN405_07040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN405_07045 PF01903 CbiX DN405_07055 PF00209 Sodium:neurotransmitter symporter family DN405_07065 PF00375 Sodium:dicarboxylate symporter family DN405_07075 PF03553 Na+/H+ antiporter family DN405_07090 PF09922 Cell wall-active antibiotics response 4TMS YvqF DN405_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_07095 PF07730 Histidine kinase DN405_07095 PF00672 HAMP domain DN405_07100 PF00196 Bacterial regulatory proteins, luxR family DN405_07100 PF00072 Response regulator receiver domain DN405_07110 PF05525 Branched-chain amino acid transport protein DN405_07120 PF01209 ubiE/COQ5 methyltransferase family DN405_07145 PF00970 Oxidoreductase FAD-binding domain DN405_07145 PF00175 Oxidoreductase NAD-binding domain DN405_07145 PF00042 Globin DN405_07160 PF01925 Sulfite exporter TauE/SafE DN405_07165 PF01384 Phosphate transporter family DN405_07170 PF01865 Protein of unknown function DUF47 DN405_07175 PF00912 Transglycosylase DN405_07175 PF00905 Penicillin binding protein transpeptidase domain DN405_07190 PF00989 PAS fold DN405_07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_07190 PF00512 His Kinase A (phospho-acceptor) domain DN405_07195 PF01904 Protein of unknown function DUF72 DN405_07205 PF00589 Phage integrase family DN405_07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_07210 PF00512 His Kinase A (phospho-acceptor) domain DN405_07210 PF16736 Single Cache-like DN405_07210 PF00989 PAS fold DN405_07220 PF01048 Phosphorylase superfamily DN405_07230 PF09924 Uncharacterised conserved protein (DUF2156) DN405_07230 PF03706 Lysylphosphatidylglycerol synthase TM region DN405_07245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN405_07245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN405_07250 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_07250 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_07255 PF07670 Nucleoside recognition DN405_07260 PF07670 Nucleoside recognition DN405_07265 PF01479 S4 domain DN405_07265 PF00849 RNA pseudouridylate synthase DN405_07270 PF00578 AhpC/TSA family DN405_07275 PF05140 ResB-like family DN405_07280 PF01578 Cytochrome C assembly protein DN405_07285 PF00072 Response regulator receiver domain DN405_07285 PF00486 Transcriptional regulatory protein, C terminal DN405_07290 PF00512 His Kinase A (phospho-acceptor) domain DN405_07290 PF18698 Histidine kinase sensor domain DN405_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_07290 PF00672 HAMP domain DN405_07290 PF00989 PAS fold DN405_07295 PF01923 Cobalamin adenosyltransferase DN405_07310 PF12822 ECF transporter, substrate-specific component DN405_07325 PF00271 Helicase conserved C-terminal domain DN405_07325 PF00270 DEAD/DEAH box helicase DN405_07330 PF02517 CPBP intramembrane metalloprotease DN405_07340 PF00149 Calcineurin-like phosphoesterase DN405_07345 PF13411 MerR HTH family regulatory protein DN405_07350 PF05389 Negative regulator of genetic competence (MecA) DN405_07355 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN405_07355 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN405_07380 PF17763 Glutaminase/Asparaginase C-terminal domain DN405_07380 PF00710 Asparaginase, N-terminal DN405_07385 PF02224 Cytidylate kinase DN405_07390 PF00575 S1 RNA binding domain DN405_07395 PF01070 FMN-dependent dehydrogenase DN405_07400 PF14140 YpzI-like protein DN405_07410 PF14045 YIEGIA protein DN405_07420 PF01926 50S ribosome-binding GTPase DN405_07420 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DN405_07425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DN405_07425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DN405_07435 PF10966 Protein of unknown function (DUF2768) DN405_07445 PF09547 Stage IV sporulation protein A (spore_IV_A) DN405_07450 PF00216 Bacterial DNA-binding protein DN405_07455 PF01227 GTP cyclohydrolase I DN405_07460 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DN405_07465 PF01209 ubiE/COQ5 methyltransferase family DN405_07470 PF00348 Polyprenyl synthetase DN405_07475 PF00334 Nucleoside diphosphate kinase DN405_07480 PF01264 Chorismate synthase DN405_07485 PF01761 3-dehydroquinate synthase DN405_07490 PF00155 Aminotransferase class I and II DN405_07500 PF08864 UPF0302 domain DN405_07500 PF08858 IDEAL domain DN405_07505 PF10673 Protein of unknown function (DUF2487) DN405_07510 PF00355 Rieske [2Fe-2S] domain DN405_07515 PF00033 Cytochrome b/b6/petB DN405_07520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN405_07520 PF00032 Cytochrome b(C-terminal)/b6/petD DN405_07525 PF07187 Protein of unknown function (DUF1405) DN405_07535 PF09577 Sporulation protein YpjB (SpoYpjB) DN405_07540 PF04298 Putative neutral zinc metallopeptidase DN405_07550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_07550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_07560 PF03819 MazG nucleotide pyrophosphohydrolase domain DN405_07565 PF01113 Dihydrodipicolinate reductase, N-terminus DN405_07565 PF05173 Dihydrodipicolinate reductase, C-terminus DN405_07570 PF02142 MGS-like domain DN405_07575 PF02585 GlcNAc-PI de-N-acetylase DN405_07580 PF00534 Glycosyl transferases group 1 DN405_07580 PF13439 Glycosyltransferase Family 4 DN405_07585 PF13735 tRNA nucleotidyltransferase domain 2 putative DN405_07585 PF12627 Probable RNA and SrmB- binding site of polymerase A DN405_07585 PF01743 Poly A polymerase head domain DN405_07590 PF03099 Biotin/lipoate A/B protein ligase family DN405_07590 PF08279 HTH domain DN405_07590 PF02237 Biotin protein ligase C terminal domain DN405_07600 PF02548 Ketopantoate hydroxymethyltransferase DN405_07605 PF02569 Pantoate-beta-alanine ligase DN405_07610 PF02261 Aspartate decarboxylase DN405_07615 PF04851 Type III restriction enzyme, res subunit DN405_07615 PF13307 Helicase C-terminal domain DN405_07615 PF00929 Exonuclease DN405_07620 PF14084 Protein of unknown function (DUF4264) DN405_07630 PF00155 Aminotransferase class I and II DN405_07635 PF07261 Replication initiation and membrane attachment DN405_07640 PF10576 Iron-sulfur binding domain of endonuclease III DN405_07640 PF00633 Helix-hairpin-helix motif DN405_07640 PF00730 HhH-GPD superfamily base excision DNA repair protein DN405_07650 PF00905 Penicillin binding protein transpeptidase domain DN405_07650 PF00912 Transglycosylase DN405_07655 PF03838 Recombination protein U DN405_07660 PF10720 Protein of unknown function (DUF2515) DN405_07690 PF06908 YspA SLOG family DN405_07695 PF05103 DivIVA protein DN405_07705 PF02926 THUMP domain DN405_07705 PF01170 Putative RNA methylase family UPF0020 DN405_07715 PF13307 Helicase C-terminal domain DN405_07720 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DN405_07730 PF00557 Metallopeptidase family M24 DN405_07735 PF00156 Phosphoribosyl transferase domain DN405_07740 PF00860 Permease family DN405_07745 PF04235 Protein of unknown function (DUF418) DN405_07750 PF00350 Dynamin family DN405_07760 PF00583 Acetyltransferase (GNAT) family DN405_07765 PF10752 Protein of unknown function (DUF2533) DN405_07770 PF00581 Rhodanese-like domain DN405_07795 PF03738 Glutathionylspermidine synthase preATP-grasp DN405_07810 PF00690 Cation transporter/ATPase, N-terminus DN405_07810 PF00689 Cation transporting ATPase, C-terminus DN405_07815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN405_07815 PF01367 5'-3' exonuclease, C-terminal SAM fold DN405_07830 PF13807 G-rich domain on putative tyrosine kinase DN405_07830 PF02706 Chain length determinant protein DN405_07840 PF02397 Bacterial sugar transferase DN405_07855 PF00535 Glycosyl transferase family 2 DN405_07860 PF00534 Glycosyl transferases group 1 DN405_07860 PF13439 Glycosyltransferase Family 4 DN405_07875 PF18014 Acetyltransferase (GNAT) domain DN405_07875 PF13673 Acetyltransferase (GNAT) domain DN405_07895 PF13456 Reverse transcriptase-like DN405_07900 PF01263 Aldose 1-epimerase DN405_07925 PF00313 'Cold-shock' DNA-binding domain DN405_07930 PF08892 YqcI/YcgG family DN405_07935 PF01810 LysE type translocator DN405_07955 PF00474 Sodium:solute symporter family DN405_07960 PF00202 Aminotransferase class-III DN405_07970 PF00999 Sodium/hydrogen exchanger family DN405_07975 PF00753 Metallo-beta-lactamase superfamily DN405_07975 PF17770 Ribonuclease J C-terminal domain DN405_07975 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN405_07980 PF06445 GyrI-like small molecule binding domain DN405_07980 PF13411 MerR HTH family regulatory protein DN405_07990 PF04239 Protein of unknown function (DUF421) DN405_07995 PF02698 DUF218 domain DN405_08005 PF00881 Nitroreductase family DN405_08030 PF17209 Hfq protein DN405_08040 PF01618 MotA/TolQ/ExbB proton channel family DN405_08045 PF00691 OmpA family DN405_08045 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN405_08050 PF00072 Response regulator receiver domain DN405_08055 PF01584 CheW-like domain DN405_08055 PF07194 P2 response regulator binding domain DN405_08055 PF02895 Signal transducing histidine kinase, homodimeric domain DN405_08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_08055 PF01627 Hpt domain DN405_08060 PF04509 CheC-like family DN405_08060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN405_08075 PF03705 CheR methyltransferase, all-alpha domain DN405_08075 PF01739 CheR methyltransferase, SAM binding domain DN405_08095 PF00460 Flagella basal body rod protein DN405_08095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN405_08100 PF00700 Bacterial flagellin C-terminal helical region DN405_08100 PF00669 Bacterial flagellin N-terminal helical region DN405_08120 PF00460 Flagella basal body rod protein DN405_08125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN405_08125 PF00460 Flagella basal body rod protein DN405_08130 PF02049 Flagellar hook-basal body complex protein FliE DN405_08135 PF01514 Secretory protein of YscJ/FliF family DN405_08135 PF08345 Flagellar M-ring protein C-terminal DN405_08140 PF14842 FliG N-terminal domain DN405_08140 PF14841 FliG middle domain DN405_08140 PF01706 FliG C-terminal domain DN405_08150 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN405_08150 PF18269 T3SS EscN ATPase C-terminal domain DN405_08150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN405_08170 PF00460 Flagella basal body rod protein DN405_08170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN405_08170 PF07559 Flagellar basal body protein FlaE DN405_08185 PF01584 CheW-like domain DN405_08185 PF00072 Response regulator receiver domain DN405_08190 PF12181 DNA binding domain of the motility gene repressor (MogR) DN405_08195 PF00700 Bacterial flagellin C-terminal helical region DN405_08195 PF00669 Bacterial flagellin N-terminal helical region DN405_08200 PF00700 Bacterial flagellin C-terminal helical region DN405_08200 PF00669 Bacterial flagellin N-terminal helical region DN405_08205 PF01464 Transglycosylase SLT domain DN405_08215 PF02154 Flagellar motor switch protein FliM DN405_08215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN405_08220 PF04509 CheC-like family DN405_08220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN405_08230 PF00813 FliP family DN405_08235 PF01313 Bacterial export proteins, family 3 DN405_08245 PF01312 FlhB HrpN YscU SpaS Family DN405_08250 PF00771 FHIPEP family DN405_08255 PF00448 SRP54-type protein, GTPase domain DN405_08260 PF00460 Flagella basal body rod protein DN405_08260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN405_08265 PF02272 DHHA1 domain DN405_08265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN405_08265 PF01411 tRNA synthetases class II (A) DN405_08300 PF03992 Antibiotic biosynthesis monooxygenase DN405_08305 PF08141 Small acid-soluble spore protein H family DN405_08330 PF00005 ABC transporter DN405_08330 PF08402 TOBE domain DN405_08340 PF00528 Binding-protein-dependent transport system inner membrane component DN405_08345 PF12706 Beta-lactamase superfamily domain DN405_08345 PF00753 Metallo-beta-lactamase superfamily DN405_08355 PF10787 Uncharacterised protein from bacillus cereus group DN405_08375 PF00300 Histidine phosphatase superfamily (branch 1) DN405_08385 PF00561 alpha/beta hydrolase fold DN405_08395 PF01047 MarR family DN405_08405 PF13537 Glutamine amidotransferase domain DN405_08405 PF00733 Asparagine synthase DN405_08425 PF16916 Dimerisation domain of Zinc Transporter DN405_08425 PF01545 Cation efflux family DN405_08435 PF00392 Bacterial regulatory proteins, gntR family DN405_08435 PF07729 FCD domain DN405_08440 PF00892 EamA-like transporter family DN405_08450 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN405_08450 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN405_08460 PF03773 Predicted permease DN405_08475 PF03553 Na+/H+ antiporter family DN405_08480 PF13411 MerR HTH family regulatory protein DN405_08490 PF00206 Lyase DN405_08490 PF10415 Fumarase C C-terminus DN405_08505 PF01554 MatE DN405_08510 PF03575 Peptidase family S51 DN405_08530 PF02683 Cytochrome C biogenesis protein transmembrane region DN405_08535 PF00578 AhpC/TSA family DN405_08550 PF00291 Pyridoxal-phosphate dependent enzyme DN405_08555 PF04286 Protein of unknown function (DUF445) DN405_08585 PF00072 Response regulator receiver domain DN405_08585 PF00196 Bacterial regulatory proteins, luxR family DN405_08590 PF13185 GAF domain DN405_08590 PF13492 GAF domain DN405_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_08590 PF07730 Histidine kinase DN405_08595 PF00005 ABC transporter DN405_08615 PF13091 PLD-like domain DN405_08620 PF00696 Amino acid kinase family DN405_08625 PF00375 Sodium:dicarboxylate symporter family DN405_08630 PF00206 Lyase DN405_08630 PF10415 Fumarase C C-terminus DN405_08635 PF03949 Malic enzyme, NAD binding domain DN405_08635 PF00390 Malic enzyme, N-terminal domain DN405_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_08645 PF08664 YcbB domain DN405_08645 PF00072 Response regulator receiver domain DN405_08650 PF00176 SNF2 family N-terminal domain DN405_08650 PF00271 Helicase conserved C-terminal domain DN405_08650 PF04434 SWIM zinc finger DN405_08665 PF03590 Aspartate-ammonia ligase DN405_08675 PF00696 Amino acid kinase family DN405_08675 PF13840 ACT domain DN405_08690 PF13761 Domain of unknown function (DUF4166) DN405_08695 PF14158 YndJ-like protein DN405_08700 PF09297 NADH pyrophosphatase zinc ribbon domain DN405_08700 PF00293 NUDIX domain DN405_08705 PF07690 Major Facilitator Superfamily DN405_08715 PF03976 Polyphosphate kinase 2 (PPK2) DN405_08720 PF10400 Virulence activator alpha C-term DN405_08720 PF03551 Transcriptional regulator PadR-like family DN405_08725 PF07690 Major Facilitator Superfamily DN405_08735 PF07690 Major Facilitator Superfamily DN405_08740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN405_08740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN405_08745 PF01926 50S ribosome-binding GTPase DN405_08745 PF16360 GTP-binding GTPase Middle Region DN405_08745 PF13167 GTP-binding GTPase N-terminal DN405_08750 PF07690 Major Facilitator Superfamily DN405_08755 PF00291 Pyridoxal-phosphate dependent enzyme DN405_08775 PF00209 Sodium:neurotransmitter symporter family DN405_08780 PF03422 Carbohydrate binding module (family 6) DN405_08780 PF00457 Glycosyl hydrolases family 11 DN405_08780 PF01522 Polysaccharide deacetylase DN405_08790 PF04239 Protein of unknown function (DUF421) DN405_08805 PF01625 Peptide methionine sulfoxide reductase DN405_08815 PF01063 Amino-transferase class IV DN405_08820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN405_08820 PF00205 Thiamine pyrophosphate enzyme, central domain DN405_08820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN405_08830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN405_08830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN405_08835 PF00920 Dehydratase family DN405_08840 PF00585 C-terminal regulatory domain of Threonine dehydratase DN405_08840 PF00291 Pyridoxal-phosphate dependent enzyme DN405_08850 PF09587 Bacterial capsule synthesis protein PGA_cap DN405_08865 PF07690 Major Facilitator Superfamily DN405_08870 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN405_08880 PF00072 Response regulator receiver domain DN405_08880 PF04397 LytTr DNA-binding domain DN405_08885 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DN405_08885 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DN405_08890 PF13673 Acetyltransferase (GNAT) domain DN405_08900 PF01979 Amidohydrolase family DN405_08905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_08910 PF13302 Acetyltransferase (GNAT) domain DN405_08915 PF00072 Response regulator receiver domain DN405_08915 PF00486 Transcriptional regulatory protein, C terminal DN405_08920 PF00512 His Kinase A (phospho-acceptor) domain DN405_08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_08930 PF01566 Natural resistance-associated macrophage protein DN405_08945 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN405_08945 PF02558 Ketopantoate reductase PanE/ApbA DN405_08950 PF13520 Amino acid permease DN405_08960 PF05791 Bacillus haemolytic enterotoxin (HBL) DN405_08965 PF05791 Bacillus haemolytic enterotoxin (HBL) DN405_08975 PF00754 F5/8 type C domain DN405_08975 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DN405_08975 PF13088 BNR repeat-like domain DN405_08980 PF02073 Thermophilic metalloprotease (M29) DN405_08995 PF00583 Acetyltransferase (GNAT) family DN405_09005 PF01906 Putative heavy-metal-binding DN405_09015 PF00440 Bacterial regulatory proteins, tetR family DN405_09020 PF04198 Putative sugar-binding domain DN405_09025 PF01791 DeoC/LacD family aldolase DN405_09030 PF07662 Na+ dependent nucleoside transporter C-terminus DN405_09030 PF01773 Na+ dependent nucleoside transporter N-terminus DN405_09035 PF00591 Glycosyl transferase family, a/b domain DN405_09035 PF02885 Glycosyl transferase family, helical bundle domain DN405_09035 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN405_09040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN405_09070 PF07301 Protein of unknown function (DUF1453) DN405_09075 PF05979 Bacterial protein of unknown function (DUF896) DN405_09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_09090 PF03466 LysR substrate binding domain DN405_09105 PF05195 Aminopeptidase P, N-terminal domain DN405_09105 PF00557 Metallopeptidase family M24 DN405_09115 PF07731 Multicopper oxidase DN405_09115 PF07732 Multicopper oxidase DN405_09115 PF00394 Multicopper oxidase DN405_09120 PF01551 Peptidase family M23 DN405_09155 PF02525 Flavodoxin-like fold DN405_09160 PF05525 Branched-chain amino acid transport protein DN405_09170 PF05425 Copper resistance protein D DN405_09170 PF13115 YtkA-like DN405_09170 PF04234 CopC domain DN405_09175 PF07987 Domain of unkown function (DUF1775) DN405_09180 PF00892 EamA-like transporter family DN405_09185 PF03466 LysR substrate binding domain DN405_09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_09190 PF02082 Transcriptional regulator DN405_09195 PF01323 DSBA-like thioredoxin domain DN405_09200 PF00881 Nitroreductase family DN405_09205 PF01425 Amidase DN405_09210 PF01594 AI-2E family transporter DN405_09215 PF00056 lactate/malate dehydrogenase, NAD binding domain DN405_09215 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN405_09220 PF01593 Flavin containing amine oxidoreductase DN405_09230 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN405_09230 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN405_09240 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN405_09240 PF00005 ABC transporter DN405_09245 PF00005 ABC transporter DN405_09250 PF02653 Branched-chain amino acid transport system / permease component DN405_09260 PF03466 LysR substrate binding domain DN405_09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_09270 PF14552 Tautomerase enzyme DN405_09275 PF01047 MarR family DN405_09285 PF01654 Cytochrome bd terminal oxidase subunit I DN405_09290 PF02322 Cytochrome bd terminal oxidase subunit II DN405_09295 PF00005 ABC transporter DN405_09295 PF00664 ABC transporter transmembrane region DN405_09300 PF00664 ABC transporter transmembrane region DN405_09300 PF00005 ABC transporter DN405_09310 PF00535 Glycosyl transferase family 2 DN405_09315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN405_09320 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_09345 PF17676 LD-carboxypeptidase C-terminal domain DN405_09345 PF02016 LD-carboxypeptidase N-terminal domain DN405_09350 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_09350 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_09365 PF00877 NlpC/P60 family DN405_09365 PF01476 LysM domain DN405_09375 PF00005 ABC transporter DN405_09375 PF00664 ABC transporter transmembrane region DN405_09380 PF00486 Transcriptional regulatory protein, C terminal DN405_09380 PF00072 Response regulator receiver domain DN405_09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_09385 PF00512 His Kinase A (phospho-acceptor) domain DN405_09385 PF16736 Single Cache-like DN405_09385 PF00989 PAS fold DN405_09390 PF00106 short chain dehydrogenase DN405_09395 PF04439 Streptomycin adenylyltransferase DN405_09400 PF01522 Polysaccharide deacetylase DN405_09400 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DN405_09420 PF01842 ACT domain DN405_09420 PF03447 Homoserine dehydrogenase, NAD binding domain DN405_09420 PF00742 Homoserine dehydrogenase DN405_09425 PF00291 Pyridoxal-phosphate dependent enzyme DN405_09430 PF00288 GHMP kinases N terminal domain DN405_09430 PF08544 GHMP kinases C terminal DN405_09445 PF03816 Cell envelope-related transcriptional attenuator domain DN405_09455 PF00072 Response regulator receiver domain DN405_09455 PF00486 Transcriptional regulatory protein, C terminal DN405_09460 PF00512 His Kinase A (phospho-acceptor) domain DN405_09460 PF00989 PAS fold DN405_09460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_09460 PF16736 Single Cache-like DN405_09465 PF01522 Polysaccharide deacetylase DN405_09475 PF02308 MgtC family DN405_09480 PF00583 Acetyltransferase (GNAT) family DN405_09485 PF04183 IucA / IucC family DN405_09485 PF06276 Ferric iron reductase FhuF-like transporter DN405_09490 PF06276 Ferric iron reductase FhuF-like transporter DN405_09490 PF04183 IucA / IucC family DN405_09495 PF00501 AMP-binding enzyme DN405_09495 PF13193 AMP-binding enzyme C-terminal domain DN405_09510 PF01261 Xylose isomerase-like TIM barrel DN405_09515 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN405_09520 PF07690 Major Facilitator Superfamily DN405_09525 PF01810 LysE type translocator DN405_09530 PF00155 Aminotransferase class I and II DN405_09530 PF00392 Bacterial regulatory proteins, gntR family DN405_09540 PF01734 Patatin-like phospholipase DN405_09565 PF13344 Haloacid dehalogenase-like hydrolase DN405_09565 PF00293 NUDIX domain DN405_09570 PF02540 NAD synthase DN405_09575 PF02687 FtsX-like permease family DN405_09580 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN405_09580 PF18277 AbrB C-terminal domain DN405_09585 PF00082 Subtilase family DN405_09600 PF05656 Protein of unknown function (DUF805) DN405_09620 PF03193 RsgA GTPase DN405_09625 PF02743 Cache domain DN405_09625 PF00672 HAMP domain DN405_09625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_09645 PF00210 Ferritin-like domain DN405_09660 PF00296 Luciferase-like monooxygenase DN405_09670 PF01593 Flavin containing amine oxidoreductase DN405_09675 PF13302 Acetyltransferase (GNAT) domain DN405_09680 PF00248 Aldo/keto reductase family DN405_09690 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN405_09690 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN405_09695 PF00583 Acetyltransferase (GNAT) family DN405_09700 PF01297 Zinc-uptake complex component A periplasmic DN405_09705 PF13460 NAD(P)H-binding DN405_09710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN405_09715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN405_09715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN405_09725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_09730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_09740 PF00300 Histidine phosphatase superfamily (branch 1) DN405_09750 PF08757 CotH kinase protein DN405_09755 PF00293 NUDIX domain DN405_09760 PF09335 SNARE associated Golgi protein DN405_09765 PF01943 Polysaccharide biosynthesis protein DN405_09765 PF14667 Polysaccharide biosynthesis C-terminal domain DN405_09775 PF03773 Predicted permease DN405_09780 PF09323 Domain of unknown function (DUF1980) DN405_09785 PF03061 Thioesterase superfamily DN405_09795 PF13396 Phospholipase_D-nuclease N-terminal DN405_09795 PF13091 PLD-like domain DN405_09810 PF13460 NAD(P)H-binding DN405_09815 PF04306 Protein of unknown function (DUF456) DN405_09820 PF00571 CBS domain DN405_09820 PF03471 Transporter associated domain DN405_09820 PF01595 Cyclin M transmembrane N-terminal domain DN405_09835 PF05525 Branched-chain amino acid transport protein DN405_09840 PF01588 Putative tRNA binding domain DN405_09860 PF07454 Stage II sporulation protein P (SpoIIP) DN405_09870 PF02557 D-alanyl-D-alanine carboxypeptidase DN405_09880 PF01425 Amidase DN405_09885 PF07690 Major Facilitator Superfamily DN405_09895 PF01145 SPFH domain / Band 7 family DN405_09900 PF07454 Stage II sporulation protein P (SpoIIP) DN405_09925 PF01168 Alanine racemase, N-terminal domain DN405_09925 PF00842 Alanine racemase, C-terminal domain DN405_09945 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN405_09950 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_09950 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_09955 PF00392 Bacterial regulatory proteins, gntR family DN405_09955 PF00155 Aminotransferase class I and II DN405_09985 PF00583 Acetyltransferase (GNAT) family DN405_10000 PF06013 Proteins of 100 residues with WXG DN405_10015 PF08817 WXG100 protein secretion system (Wss), protein YukD DN405_10020 PF10140 WXG100 protein secretion system (Wss), protein YukC DN405_10025 PF01580 FtsK/SpoIIIE family DN405_10025 PF12538 DNA transporter DN405_10075 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN405_10100 PF01209 ubiE/COQ5 methyltransferase family DN405_10105 PF01268 Formate--tetrahydrofolate ligase DN405_10115 PF00271 Helicase conserved C-terminal domain DN405_10115 PF00270 DEAD/DEAH box helicase DN405_10120 PF01261 Xylose isomerase-like TIM barrel DN405_10125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_10135 PF00107 Zinc-binding dehydrogenase DN405_10135 PF08240 Alcohol dehydrogenase GroES-like domain DN405_10140 PF08281 Sigma-70, region 4 DN405_10140 PF04542 Sigma-70 region 2 DN405_10165 PF00255 Glutathione peroxidase DN405_10170 PF11992 Domain of unknown function (DUF3488) DN405_10170 PF13559 Domain of unknown function (DUF4129) DN405_10170 PF01841 Transglutaminase-like superfamily DN405_10175 PF01882 Protein of unknown function DUF58 DN405_10180 PF17863 AAA lid domain DN405_10180 PF07726 ATPase family associated with various cellular activities (AAA) DN405_10185 PF00384 Molybdopterin oxidoreductase DN405_10185 PF14710 Respiratory nitrate reductase alpha N-terminal DN405_10185 PF01568 Molydopterin dinucleotide binding domain DN405_10190 PF14711 Respiratory nitrate reductase beta C-terminal DN405_10190 PF13247 4Fe-4S dicluster domain DN405_10195 PF02613 Nitrate reductase delta subunit DN405_10200 PF02665 Nitrate reductase gamma subunit DN405_10205 PF00027 Cyclic nucleotide-binding domain DN405_10205 PF00325 Bacterial regulatory proteins, crp family DN405_10210 PF04055 Radical SAM superfamily DN405_10210 PF06463 Molybdenum Cofactor Synthesis C DN405_10215 PF00899 ThiF family DN405_10220 PF00994 Probable molybdopterin binding domain DN405_10220 PF03454 MoeA C-terminal region (domain IV) DN405_10220 PF03453 MoeA N-terminal region (domain I and II) DN405_10225 PF02391 MoaE protein DN405_10235 PF07690 Major Facilitator Superfamily DN405_10265 PF01903 CbiX DN405_10270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN405_10275 PF00355 Rieske [2Fe-2S] domain DN405_10280 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN405_10280 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_10280 PF18267 Rubredoxin NAD+ reductase C-terminal domain DN405_10280 PF04324 BFD-like [2Fe-2S] binding domain DN405_10280 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN405_10285 PF04405 Domain of Unknown function (DUF542) DN405_10285 PF01814 Hemerythrin HHE cation binding domain DN405_10320 PF04232 Stage V sporulation protein S (SpoVS) DN405_10345 PF18801 response regulator aspartate phosphatase H, N terminal DN405_10345 PF17874 MalT-like TPR region DN405_10360 PF01966 HD domain DN405_10365 PF16326 ABC transporter C-terminal domain DN405_10365 PF00005 ABC transporter DN405_10365 PF12848 ABC transporter DN405_10380 PF00436 Single-strand binding protein family DN405_10390 PF08712 Scaffold protein Nfu/NifU N terminal DN405_10390 PF13769 Virulence factor DN405_10400 PF06491 Disulphide isomerase DN405_10405 PF04445 Putative SAM-dependent methyltransferase DN405_10410 PF03485 Arginyl tRNA synthetase N terminal domain DN405_10410 PF05746 DALR anticodon binding domain DN405_10410 PF00750 tRNA synthetases class I (R) DN405_10435 PF00133 tRNA synthetases class I (I, L, M and V) DN405_10435 PF08264 Anticodon-binding domain of tRNA DN405_10465 PF01336 OB-fold nucleic acid binding domain DN405_10465 PF00152 tRNA synthetases class II (D, K and N) DN405_10470 PF00209 Sodium:neurotransmitter symporter family DN405_10485 PF10997 Alternate to MurJ DN405_10490 PF13419 Haloacid dehalogenase-like hydrolase DN405_10500 PF00465 Iron-containing alcohol dehydrogenase DN405_10505 PF01177 Asp/Glu/Hydantoin racemase DN405_10510 PF01980 tRNA-methyltransferase O DN405_10515 PF00583 Acetyltransferase (GNAT) family DN405_10520 PF11188 Protein of unknown function (DUF2975) DN405_10525 PF13443 Cro/C1-type HTH DNA-binding domain DN405_10540 PF00005 ABC transporter DN405_10545 PF05975 Bacterial ABC transporter protein EcsB DN405_10550 PF14005 YpjP-like protein DN405_10555 PF13419 Haloacid dehalogenase-like hydrolase DN405_10570 PF07930 D-aminopeptidase, domain B DN405_10570 PF00144 Beta-lactamase DN405_10575 PF00303 Thymidylate synthase DN405_10580 PF00186 Dihydrofolate reductase DN405_10585 PF05223 NTF2-like N-terminal transpeptidase domain DN405_10585 PF03717 Penicillin-binding Protein dimerisation domain DN405_10585 PF00905 Penicillin binding protein transpeptidase domain DN405_10590 PF02525 Flavodoxin-like fold DN405_10595 PF01553 Acyltransferase DN405_10600 PF03006 Haemolysin-III related DN405_10605 PF02416 mttA/Hcf106 family DN405_10610 PF00902 Sec-independent protein translocase protein (TatC) DN405_10620 PF02645 Uncharacterised protein, DegV family COG1307 DN405_10630 PF02630 SCO1/SenC DN405_10635 PF00011 Hsp20/alpha crystallin family DN405_10640 PF13537 Glutamine amidotransferase domain DN405_10640 PF00733 Asparagine synthase DN405_10655 PF01520 N-acetylmuramoyl-L-alanine amidase DN405_10655 PF05036 Sporulation related domain DN405_10660 PF01497 Periplasmic binding protein DN405_10665 PF01063 Amino-transferase class IV DN405_10670 PF00881 Nitroreductase family DN405_10685 PF00857 Isochorismatase family DN405_10695 PF00011 Hsp20/alpha crystallin family DN405_10700 PF00924 Mechanosensitive ion channel DN405_10705 PF07730 Histidine kinase DN405_10705 PF13185 GAF domain DN405_10710 PF00072 Response regulator receiver domain DN405_10710 PF00196 Bacterial regulatory proteins, luxR family DN405_10715 PF01418 Helix-turn-helix domain, rpiR family DN405_10715 PF01380 SIS domain DN405_10720 PF02567 Phenazine biosynthesis-like protein DN405_10725 PF00107 Zinc-binding dehydrogenase DN405_10725 PF08240 Alcohol dehydrogenase GroES-like domain DN405_10740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN405_10740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN405_10745 PF02447 GntP family permease DN405_10750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN405_10750 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN405_10755 PF10924 Protein of unknown function (DUF2711) DN405_10770 PF03358 NADPH-dependent FMN reductase DN405_10785 PF00005 ABC transporter DN405_10785 PF00571 CBS domain DN405_10790 PF00528 Binding-protein-dependent transport system inner membrane component DN405_10795 PF13520 Amino acid permease DN405_10825 PF00571 CBS domain DN405_10825 PF01595 Cyclin M transmembrane N-terminal domain DN405_10825 PF03471 Transporter associated domain DN405_10830 PF00171 Aldehyde dehydrogenase family DN405_10835 PF07997 Protein of unknown function (DUF1694) DN405_10840 PF09385 Histidine kinase N terminal DN405_10850 PF00202 Aminotransferase class-III DN405_10855 PF01144 Coenzyme A transferase DN405_10860 PF01144 Coenzyme A transferase DN405_10865 PF01546 Peptidase family M20/M25/M40 DN405_10865 PF07687 Peptidase dimerisation domain DN405_10870 PF00583 Acetyltransferase (GNAT) family DN405_10875 PF13426 PAS domain DN405_10875 PF00158 Sigma-54 interaction domain DN405_10875 PF02954 Bacterial regulatory protein, Fis family DN405_10880 PF12544 Lysine-2,3-aminomutase DN405_10885 PF14122 YokU-like protein, putative antitoxin DN405_10890 PF06855 YozE SAM-like fold DN405_10905 PF14162 YozD-like protein DN405_10915 PF00069 Protein kinase domain DN405_10915 PF08239 Bacterial SH3 domain DN405_10925 PF01569 PAP2 superfamily DN405_10930 PF16916 Dimerisation domain of Zinc Transporter DN405_10930 PF01545 Cation efflux family DN405_10935 PF00085 Thioredoxin DN405_11000 PF10676 Spore germination protein gerPA/gerPF DN405_11015 PF00106 short chain dehydrogenase DN405_11035 PF00905 Penicillin binding protein transpeptidase domain DN405_11035 PF00912 Transglycosylase DN405_11045 PF07690 Major Facilitator Superfamily DN405_11050 PF01521 Iron-sulphur cluster biosynthesis DN405_11055 PF00285 Citrate synthase, C-terminal domain DN405_11060 PF03972 MmgE/PrpD family DN405_11070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN405_11070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN405_11070 PF02770 Acyl-CoA dehydrogenase, middle domain DN405_11075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN405_11075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN405_11080 PF00171 Aldehyde dehydrogenase family DN405_11085 PF01810 LysE type translocator DN405_11090 PF00378 Enoyl-CoA hydratase/isomerase DN405_11105 PF12320 Type 5 capsule protein repressor C-terminal domain DN405_11105 PF00149 Calcineurin-like phosphoesterase DN405_11110 PF13476 AAA domain DN405_11115 PF01022 Bacterial regulatory protein, arsR family DN405_11135 PF07690 Major Facilitator Superfamily DN405_11140 PF00106 short chain dehydrogenase DN405_11145 PF00425 chorismate binding enzyme DN405_11150 PF00501 AMP-binding enzyme DN405_11150 PF13193 AMP-binding enzyme C-terminal domain DN405_11155 PF00550 Phosphopantetheine attachment site DN405_11155 PF00857 Isochorismatase family DN405_11160 PF00501 AMP-binding enzyme DN405_11160 PF13193 AMP-binding enzyme C-terminal domain DN405_11160 PF00668 Condensation domain DN405_11160 PF00550 Phosphopantetheine attachment site DN405_11160 PF00975 Thioesterase domain DN405_11165 PF03621 MbtH-like protein DN405_11170 PF07690 Major Facilitator Superfamily DN405_11185 PF00216 Bacterial DNA-binding protein DN405_11195 PF05163 DinB family DN405_11200 PF00082 Subtilase family DN405_11205 PF01235 Sodium:alanine symporter family DN405_11225 PF00849 RNA pseudouridylate synthase DN405_11225 PF01479 S4 domain DN405_11230 PF03129 Anticodon binding domain DN405_11230 PF02824 TGS domain DN405_11230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN405_11230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN405_11235 PF00005 ABC transporter DN405_11245 PF07690 Major Facilitator Superfamily DN405_11260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN405_11260 PF00205 Thiamine pyrophosphate enzyme, central domain DN405_11260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN405_11300 PF00027 Cyclic nucleotide-binding domain DN405_11310 PF00561 alpha/beta hydrolase fold DN405_11320 PF00753 Metallo-beta-lactamase superfamily DN405_11320 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN405_11330 PF03176 MMPL family DN405_11340 PF00302 Chloramphenicol acetyltransferase DN405_11350 PF00583 Acetyltransferase (GNAT) family DN405_11380 PF13302 Acetyltransferase (GNAT) domain DN405_11390 PF00313 'Cold-shock' DNA-binding domain DN405_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_11415 PF03466 LysR substrate binding domain DN405_11420 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN405_11420 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN405_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_11440 PF03466 LysR substrate binding domain DN405_11445 PF03475 3-alpha domain DN405_11445 PF03473 MOSC domain DN405_11460 PF00005 ABC transporter DN405_11460 PF00664 ABC transporter transmembrane region DN405_11465 PF00664 ABC transporter transmembrane region DN405_11465 PF00005 ABC transporter DN405_11490 PF01810 LysE type translocator DN405_11495 PF01381 Helix-turn-helix DN405_11495 PF07883 Cupin domain DN405_11530 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_11530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN405_11535 PF04542 Sigma-70 region 2 DN405_11535 PF12680 SnoaL-like domain DN405_11535 PF08281 Sigma-70, region 4 DN405_11555 PF02638 Glycosyl hydrolase-like 10 DN405_11565 PF02378 Phosphotransferase system, EIIC DN405_11575 PF03702 Anhydro-N-acetylmuramic acid kinase DN405_11580 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN405_11585 PF02660 Glycerol-3-phosphate acyltransferase DN405_11590 PF00266 Aminotransferase class-V DN405_11595 PF00291 Pyridoxal-phosphate dependent enzyme DN405_11600 PF01047 MarR family DN405_11605 PF07690 Major Facilitator Superfamily DN405_11615 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN405_11615 PF00753 Metallo-beta-lactamase superfamily DN405_11625 PF00271 Helicase conserved C-terminal domain DN405_11625 PF00270 DEAD/DEAH box helicase DN405_11690 PF00589 Phage integrase family DN405_11695 PF00561 alpha/beta hydrolase fold DN405_11715 PF05105 Bacteriophage holin family DN405_11720 PF01510 N-acetylmuramoyl-L-alanine amidase DN405_11720 PF01476 LysM domain DN405_11720 PF01471 Putative peptidoglycan binding domain DN405_11735 PF03848 Tellurite resistance protein TehB DN405_11735 PF09313 Domain of unknown function (DUF1971) DN405_11750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN405_11750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN405_11750 PF00205 Thiamine pyrophosphate enzyme, central domain DN405_11755 PF12802 MarR family DN405_11760 PF00300 Histidine phosphatase superfamily (branch 1) DN405_11765 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DN405_11780 PF07687 Peptidase dimerisation domain DN405_11780 PF01546 Peptidase family M20/M25/M40 DN405_11795 PF00196 Bacterial regulatory proteins, luxR family DN405_11795 PF00072 Response regulator receiver domain DN405_11805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN405_11805 PF18277 AbrB C-terminal domain DN405_11815 PF01925 Sulfite exporter TauE/SafE DN405_11820 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_11835 PF07690 Major Facilitator Superfamily DN405_11840 PF00668 Condensation domain DN405_11840 PF00550 Phosphopantetheine attachment site DN405_11840 PF13193 AMP-binding enzyme C-terminal domain DN405_11840 PF00501 AMP-binding enzyme DN405_11845 PF07993 Male sterility protein DN405_11845 PF00550 Phosphopantetheine attachment site DN405_11845 PF00668 Condensation domain DN405_11845 PF13193 AMP-binding enzyme C-terminal domain DN405_11845 PF00501 AMP-binding enzyme DN405_11850 PF00550 Phosphopantetheine attachment site DN405_11850 PF00668 Condensation domain DN405_11850 PF13193 AMP-binding enzyme C-terminal domain DN405_11850 PF00501 AMP-binding enzyme DN405_11855 PF01648 4'-phosphopantetheinyl transferase superfamily DN405_11860 PF00975 Thioesterase domain DN405_11885 PF05139 Erythromycin esterase DN405_11900 PF13302 Acetyltransferase (GNAT) domain DN405_11910 PF01520 N-acetylmuramoyl-L-alanine amidase DN405_11910 PF00395 S-layer homology domain DN405_11945 PF01734 Patatin-like phospholipase DN405_11945 PF00027 Cyclic nucleotide-binding domain DN405_11965 PF01842 ACT domain DN405_11965 PF03315 Serine dehydratase beta chain DN405_11970 PF03313 Serine dehydratase alpha chain DN405_11985 PF00672 HAMP domain DN405_11985 PF02743 Cache domain DN405_11985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_12010 PF00440 Bacterial regulatory proteins, tetR family DN405_12010 PF18665 Tetracyclin repressor-like, C-terminal domain DN405_12015 PF08453 Peptidase family M9 N-terminal DN405_12015 PF18496 Collagenase G catalytic helper subdomain DN405_12015 PF01752 Collagenase DN405_12020 PF00144 Beta-lactamase DN405_12020 PF11954 Domain of unknown function (DUF3471) DN405_12025 PF03717 Penicillin-binding Protein dimerisation domain DN405_12025 PF05223 NTF2-like N-terminal transpeptidase domain DN405_12025 PF00905 Penicillin binding protein transpeptidase domain DN405_12030 PF04542 Sigma-70 region 2 DN405_12030 PF08281 Sigma-70, region 4 DN405_12040 PF00905 Penicillin binding protein transpeptidase domain DN405_12040 PF03717 Penicillin-binding Protein dimerisation domain DN405_12055 PF00149 Calcineurin-like phosphoesterase DN405_12065 PF00005 ABC transporter DN405_12075 PF08359 YsiA-like protein, C-terminal region DN405_12075 PF00440 Bacterial regulatory proteins, tetR family DN405_12090 PF02770 Acyl-CoA dehydrogenase, middle domain DN405_12090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN405_12090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN405_12095 PF02785 Biotin carboxylase C-terminal domain DN405_12095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN405_12095 PF00289 Biotin carboxylase, N-terminal domain DN405_12100 PF00364 Biotin-requiring enzyme DN405_12105 PF00682 HMGL-like DN405_12110 PF00378 Enoyl-CoA hydratase/isomerase DN405_12115 PF01039 Carboxyl transferase domain DN405_12120 PF13193 AMP-binding enzyme C-terminal domain DN405_12120 PF00501 AMP-binding enzyme DN405_12120 PF16177 Acetyl-coenzyme A synthetase N-terminus DN405_12150 PF00485 Phosphoribulokinase / Uridine kinase family DN405_12175 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_12175 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_12180 PF00512 His Kinase A (phospho-acceptor) domain DN405_12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_12185 PF00486 Transcriptional regulatory protein, C terminal DN405_12185 PF00072 Response regulator receiver domain DN405_12190 PF01966 HD domain DN405_12200 PF01048 Phosphorylase superfamily DN405_12215 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN405_12215 PF01447 Thermolysin metallopeptidase, catalytic domain DN405_12215 PF07504 Fungalysin/Thermolysin Propeptide Motif DN405_12215 PF03413 Peptidase propeptide and YPEB domain DN405_12220 PF12833 Helix-turn-helix domain DN405_12220 PF17853 GGDEF-like domain DN405_12235 PF05737 Collagen binding domain DN405_12235 PF05738 Cna protein B-type domain DN405_12235 PF17802 Prealbumin-like fold domain DN405_12250 PF00005 ABC transporter DN405_12250 PF17760 UvrA interaction domain DN405_12250 PF17755 UvrA DNA-binding domain DN405_12255 PF09278 MerR, DNA binding DN405_12255 PF00376 MerR family regulatory protein DN405_12260 PF07690 Major Facilitator Superfamily DN405_12275 PF01638 HxlR-like helix-turn-helix DN405_12280 PF13847 Methyltransferase domain DN405_12320 PF00155 Aminotransferase class I and II DN405_12320 PF00392 Bacterial regulatory proteins, gntR family DN405_12330 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DN405_12330 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DN405_12345 PF08240 Alcohol dehydrogenase GroES-like domain DN405_12345 PF00107 Zinc-binding dehydrogenase DN405_12355 PF04239 Protein of unknown function (DUF421) DN405_12370 PF08450 SMP-30/Gluconolactonase/LRE-like region DN405_12385 PF07486 Cell Wall Hydrolase DN405_12395 PF00486 Transcriptional regulatory protein, C terminal DN405_12395 PF00072 Response regulator receiver domain DN405_12400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_12420 PF00005 ABC transporter DN405_12425 PF02687 FtsX-like permease family DN405_12445 PF00742 Homoserine dehydrogenase DN405_12445 PF03447 Homoserine dehydrogenase, NAD binding domain DN405_12445 PF01842 ACT domain DN405_12450 PF00392 Bacterial regulatory proteins, gntR family DN405_12450 PF00155 Aminotransferase class I and II DN405_12455 PF01820 D-ala D-ala ligase N-terminus DN405_12455 PF07478 D-ala D-ala ligase C-terminus DN405_12460 PF03070 TENA/THI-4/PQQC family DN405_12490 PF00589 Phage integrase family DN405_12490 PF14659 Phage integrase, N-terminal SAM-like domain DN405_12565 PF13302 Acetyltransferase (GNAT) domain DN405_12585 PF01555 DNA methylase DN405_12600 PF00589 Phage integrase family DN405_12660 PF00574 Clp protease DN405_12740 PF05105 Bacteriophage holin family DN405_12795 PF00067 Cytochrome P450 DN405_12815 PF07561 Domain of Unknown Function (DUF1540) DN405_12825 PF00067 Cytochrome P450 DN405_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_12840 PF00512 His Kinase A (phospho-acceptor) domain DN405_12840 PF00989 PAS fold DN405_12840 PF13188 PAS domain DN405_12840 PF13426 PAS domain DN405_12850 PF10502 Signal peptidase, peptidase S26 DN405_12855 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN405_12860 PF01177 Asp/Glu/Hydantoin racemase DN405_12865 PF07155 ECF-type riboflavin transporter, S component DN405_12870 PF00005 ABC transporter DN405_12870 PF12558 ATP-binding cassette cobalt transporter DN405_12885 PF00512 His Kinase A (phospho-acceptor) domain DN405_12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_12925 PF10676 Spore germination protein gerPA/gerPF DN405_12960 PF00067 Cytochrome P450 DN405_12965 PF01636 Phosphotransferase enzyme family DN405_13010 PF00072 Response regulator receiver domain DN405_13010 PF00486 Transcriptional regulatory protein, C terminal DN405_13015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_13015 PF18719 ArlS sensor domain DN405_13015 PF00512 His Kinase A (phospho-acceptor) domain DN405_13020 PF08240 Alcohol dehydrogenase GroES-like domain DN405_13020 PF00107 Zinc-binding dehydrogenase DN405_13025 PF01569 PAP2 superfamily DN405_13070 PF01965 DJ-1/PfpI family DN405_13085 PF03009 Glycerophosphoryl diester phosphodiesterase family DN405_13105 PF00392 Bacterial regulatory proteins, gntR family DN405_13105 PF00155 Aminotransferase class I and II DN405_13110 PF00892 EamA-like transporter family DN405_13115 PF01270 Glycosyl hydrolases family 8 DN405_13120 PF01156 Inosine-uridine preferring nucleoside hydrolase DN405_13135 PF00293 NUDIX domain DN405_13135 PF13344 Haloacid dehalogenase-like hydrolase DN405_13150 PF07690 Major Facilitator Superfamily DN405_13160 PF09297 NADH pyrophosphatase zinc ribbon domain DN405_13160 PF00293 NUDIX domain DN405_13165 PF02768 DNA polymerase III beta subunit, C-terminal domain DN405_13165 PF00712 DNA polymerase III beta subunit, N-terminal domain DN405_13165 PF02767 DNA polymerase III beta subunit, central domain DN405_13175 PF12706 Beta-lactamase superfamily domain DN405_13185 PF09234 Domain of unknown function (DUF1963) DN405_13210 PF01734 Patatin-like phospholipase DN405_13215 PF08000 Bacterial PH domain DN405_13225 PF12867 DinB superfamily DN405_13240 PF02673 Bacitracin resistance protein BacA DN405_13250 PF01541 GIY-YIG catalytic domain DN405_13290 PF01266 FAD dependent oxidoreductase DN405_13320 PF00144 Beta-lactamase DN405_13325 PF13419 Haloacid dehalogenase-like hydrolase DN405_13330 PF00486 Transcriptional regulatory protein, C terminal DN405_13330 PF00072 Response regulator receiver domain DN405_13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_13335 PF00512 His Kinase A (phospho-acceptor) domain DN405_13335 PF00989 PAS fold DN405_13335 PF16736 Single Cache-like DN405_13350 PF00005 ABC transporter DN405_13355 PF02687 FtsX-like permease family DN405_13355 PF12704 MacB-like periplasmic core domain DN405_13365 PF07859 alpha/beta hydrolase fold DN405_13370 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN405_13375 PF00550 Phosphopantetheine attachment site DN405_13375 PF13193 AMP-binding enzyme C-terminal domain DN405_13375 PF00501 AMP-binding enzyme DN405_13375 PF00668 Condensation domain DN405_13385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN405_13385 PF03714 Bacterial pullanase-associated domain DN405_13385 PF00128 Alpha amylase, catalytic domain DN405_13390 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN405_13390 PF03413 Peptidase propeptide and YPEB domain DN405_13390 PF07504 Fungalysin/Thermolysin Propeptide Motif DN405_13390 PF01447 Thermolysin metallopeptidase, catalytic domain DN405_13395 PF02872 5'-nucleotidase, C-terminal domain DN405_13395 PF00149 Calcineurin-like phosphoesterase DN405_13415 PF00344 SecY translocase DN405_13420 PF00892 EamA-like transporter family DN405_13425 PF00155 Aminotransferase class I and II DN405_13425 PF00392 Bacterial regulatory proteins, gntR family DN405_13430 PF00561 alpha/beta hydrolase fold DN405_13455 PF06081 Aromatic acid exporter family member 1 DN405_13455 PF06081 Aromatic acid exporter family member 1 DN405_13470 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN405_13475 PF14620 YpeB sporulation DN405_13475 PF03413 Peptidase propeptide and YPEB domain DN405_13480 PF07486 Cell Wall Hydrolase DN405_13480 PF01471 Putative peptidoglycan binding domain DN405_13500 PF03301 Tryptophan 2,3-dioxygenase DN405_13505 PF04199 Putative cyclase DN405_13510 PF00266 Aminotransferase class-V DN405_13515 PF08359 YsiA-like protein, C-terminal region DN405_13515 PF00440 Bacterial regulatory proteins, tetR family DN405_13540 PF02954 Bacterial regulatory protein, Fis family DN405_13540 PF01590 GAF domain DN405_13540 PF00158 Sigma-54 interaction domain DN405_13550 PF13302 Acetyltransferase (GNAT) domain DN405_13555 PF08220 DeoR-like helix-turn-helix domain DN405_13555 PF00455 DeoR C terminal sensor domain DN405_13570 PF02082 Transcriptional regulator DN405_13585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN405_13585 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_13590 PF02817 e3 binding domain DN405_13590 PF00364 Biotin-requiring enzyme DN405_13590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN405_13595 PF02780 Transketolase, C-terminal domain DN405_13595 PF02779 Transketolase, pyrimidine binding domain DN405_13600 PF00676 Dehydrogenase E1 component DN405_13610 PF00106 short chain dehydrogenase DN405_13640 PF00528 Binding-protein-dependent transport system inner membrane component DN405_13645 PF00571 CBS domain DN405_13645 PF00005 ABC transporter DN405_13650 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN405_13655 PF00574 Clp protease DN405_13670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DN405_13675 PF13673 Acetyltransferase (GNAT) domain DN405_13680 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN405_13680 PF18416 N-acetylglucosamine binding protein domain 2 DN405_13685 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN405_13690 PF03781 Sulfatase-modifying factor enzyme 1 DN405_13705 PF10990 Protein of unknown function (DUF2809) DN405_13710 PF08241 Methyltransferase domain DN405_13715 PF04237 YjbR DN405_13760 PF00583 Acetyltransferase (GNAT) family DN405_13765 PF13538 UvrD-like helicase C-terminal domain DN405_13780 PF00570 HRDC domain DN405_13780 PF00271 Helicase conserved C-terminal domain DN405_13780 PF09382 RQC domain DN405_13780 PF00270 DEAD/DEAH box helicase DN405_13780 PF16124 RecQ zinc-binding DN405_13805 PF01510 N-acetylmuramoyl-L-alanine amidase DN405_13805 PF12123 N-acetylmuramoyl-l-alanine amidase DN405_13830 PF02833 DHHA2 domain DN405_13830 PF01368 DHH family DN405_13835 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN405_13835 PF18416 N-acetylglucosamine binding protein domain 2 DN405_13850 PF03193 RsgA GTPase DN405_13855 PF02627 Carboxymuconolactone decarboxylase family DN405_13860 PF01235 Sodium:alanine symporter family DN405_13865 PF00171 Aldehyde dehydrogenase family DN405_13870 PF00701 Dihydrodipicolinate synthetase family DN405_13875 PF05544 Proline racemase DN405_13880 PF05544 Proline racemase DN405_13885 PF01266 FAD dependent oxidoreductase DN405_13890 PF02954 Bacterial regulatory protein, Fis family DN405_13890 PF13188 PAS domain DN405_13890 PF00158 Sigma-54 interaction domain DN405_13895 PF04324 BFD-like [2Fe-2S] binding domain DN405_13895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_13905 PF04324 BFD-like [2Fe-2S] binding domain DN405_13905 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_13920 PF08876 Domain of unknown function (DUF1836) DN405_13925 PF09335 SNARE associated Golgi protein DN405_13935 PF04914 DltD protein DN405_13945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_13950 PF00877 NlpC/P60 family DN405_13950 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DN405_13955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN405_13955 PF13378 Enolase C-terminal domain-like DN405_13970 PF00248 Aldo/keto reductase family DN405_13975 PF01965 DJ-1/PfpI family DN405_14005 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DN405_14005 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DN405_14015 PF00512 His Kinase A (phospho-acceptor) domain DN405_14015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_14015 PF00672 HAMP domain DN405_14020 PF00486 Transcriptional regulatory protein, C terminal DN405_14020 PF00072 Response regulator receiver domain DN405_14040 PF13419 Haloacid dehalogenase-like hydrolase DN405_14045 PF01048 Phosphorylase superfamily DN405_14050 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN405_14055 PF08439 Oligopeptidase F DN405_14055 PF01432 Peptidase family M3 DN405_14060 PF02645 Uncharacterised protein, DegV family COG1307 DN405_14065 PF07552 Spore Coat Protein X and V domain DN405_14100 PF07690 Major Facilitator Superfamily DN405_14110 PF04519 Polymer-forming cytoskeletal DN405_14115 PF13171 Protein of unknown function (DUF4004) DN405_14120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_14120 PF12793 Sugar transport-related sRNA regulator N-term DN405_14125 PF07690 Major Facilitator Superfamily DN405_14145 PF04226 Transglycosylase associated protein DN405_14160 PF08241 Methyltransferase domain DN405_14195 PF00155 Aminotransferase class I and II DN405_14200 PF07977 FabA-like domain DN405_14205 PF03630 Fumble DN405_14250 PF01594 AI-2E family transporter DN405_14260 PF00296 Luciferase-like monooxygenase DN405_14265 PF00528 Binding-protein-dependent transport system inner membrane component DN405_14270 PF09084 NMT1/THI5 like DN405_14275 PF00005 ABC transporter DN405_14310 PF02522 Aminoglycoside 3-N-acetyltransferase DN405_14330 PF13536 Putative multidrug resistance efflux transporter DN405_14360 PF08713 DNA alkylation repair enzyme DN405_14365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_14375 PF01522 Polysaccharide deacetylase DN405_14385 PF03741 Integral membrane protein TerC family DN405_14390 PF00884 Sulfatase DN405_14395 PF12848 ABC transporter DN405_14395 PF00005 ABC transporter DN405_14400 PF03176 MMPL family DN405_14405 PF00440 Bacterial regulatory proteins, tetR family DN405_14405 PF16295 Tetracyclin repressor-like, C-terminal domain DN405_14415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN405_14420 PF02153 Prephenate dehydrogenase DN405_14420 PF01842 ACT domain DN405_14425 PF00155 Aminotransferase class I and II DN405_14430 PF01264 Chorismate synthase DN405_14435 PF01817 Chorismate mutase type II DN405_14435 PF00793 DAHP synthetase I family DN405_14460 PF01636 Phosphotransferase enzyme family DN405_14485 PF06725 3D domain DN405_14485 PF01476 LysM domain DN405_14495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_14500 PF08031 Berberine and berberine like DN405_14500 PF01565 FAD binding domain DN405_14520 PF06039 Malate:quinone oxidoreductase (Mqo) DN405_14525 PF13407 Periplasmic binding protein domain DN405_14530 PF02653 Branched-chain amino acid transport system / permease component DN405_14535 PF02653 Branched-chain amino acid transport system / permease component DN405_14540 PF00005 ABC transporter DN405_14545 PF04198 Putative sugar-binding domain DN405_14545 PF00325 Bacterial regulatory proteins, crp family DN405_14550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN405_14550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN405_14560 PF01791 DeoC/LacD family aldolase DN405_14570 PF03992 Antibiotic biosynthesis monooxygenase DN405_14590 PF07662 Na+ dependent nucleoside transporter C-terminus DN405_14590 PF01773 Na+ dependent nucleoside transporter N-terminus DN405_14595 PF00171 Aldehyde dehydrogenase family DN405_14600 PF01472 PUA domain DN405_14600 PF00696 Amino acid kinase family DN405_14605 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN405_14605 PF03807 NADP oxidoreductase coenzyme F420-dependent DN405_14610 PF01546 Peptidase family M20/M25/M40 DN405_14615 PF01614 Bacterial transcriptional regulator DN405_14615 PF09339 IclR helix-turn-helix domain DN405_14625 PF00324 Amino acid permease DN405_14635 PF00487 Fatty acid desaturase DN405_14640 PF05547 Immune inhibitor A peptidase M6 DN405_14645 PF04294 VanW like protein DN405_14650 PF00245 Alkaline phosphatase DN405_14655 PF11188 Protein of unknown function (DUF2975) DN405_14660 PF13443 Cro/C1-type HTH DNA-binding domain DN405_14675 PF10086 YhfC intramembrane metalloprotease DN405_14685 PF00072 Response regulator receiver domain DN405_14685 PF04397 LytTr DNA-binding domain DN405_14695 PF13302 Acetyltransferase (GNAT) domain DN405_14700 PF12681 Glyoxalase-like domain DN405_14730 PF07726 ATPase family associated with various cellular activities (AAA) DN405_14730 PF17863 AAA lid domain DN405_14745 PF07690 Major Facilitator Superfamily DN405_14755 PF00535 Glycosyl transferase family 2 DN405_14770 PF00535 Glycosyl transferase family 2 DN405_14775 PF00535 Glycosyl transferase family 2 DN405_14785 PF00202 Aminotransferase class-III DN405_14790 PF06628 Catalase-related immune-responsive DN405_14790 PF00199 Catalase DN405_14795 PF01752 Collagenase DN405_14795 PF08453 Peptidase family M9 N-terminal DN405_14795 PF04151 Bacterial pre-peptidase C-terminal domain DN405_14795 PF18496 Collagenase G catalytic helper subdomain DN405_14805 PF13382 Adenine deaminase C-terminal domain DN405_14805 PF01979 Amidohydrolase family DN405_14810 PF00144 Beta-lactamase DN405_14830 PF07726 ATPase family associated with various cellular activities (AAA) DN405_14830 PF17863 AAA lid domain DN405_14855 PF14436 Bacterial EndoU nuclease DN405_14855 PF04740 LXG domain of WXG superfamily DN405_14875 PF00881 Nitroreductase family DN405_14880 PF01047 MarR family DN405_14890 PF03764 Elongation factor G, domain IV DN405_14890 PF00679 Elongation factor G C-terminus DN405_14890 PF14492 Elongation Factor G, domain II DN405_14890 PF00009 Elongation factor Tu GTP binding domain DN405_14900 PF00293 NUDIX domain DN405_14905 PF05406 WGR domain DN405_14925 PF12833 Helix-turn-helix domain DN405_14930 PF00583 Acetyltransferase (GNAT) family DN405_14945 PF00892 EamA-like transporter family DN405_14950 PF00392 Bacterial regulatory proteins, gntR family DN405_14950 PF00155 Aminotransferase class I and II DN405_14955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DN405_14960 PF13031 Protein of unknown function (DUF3892) DN405_14990 PF01925 Sulfite exporter TauE/SafE DN405_15000 PF00324 Amino acid permease DN405_15010 PF08713 DNA alkylation repair enzyme DN405_15060 PF04989 Cephalosporin hydroxylase DN405_15065 PF10502 Signal peptidase, peptidase S26 DN405_15075 PF02146 Sir2 family DN405_15080 PF01470 Pyroglutamyl peptidase DN405_15095 PF03746 LamB/YcsF family DN405_15100 PF02626 Carboxyltransferase domain, subdomain A and B DN405_15105 PF02682 Carboxyltransferase domain, subdomain C and D DN405_15110 PF09339 IclR helix-turn-helix domain DN405_15110 PF01614 Bacterial transcriptional regulator DN405_15115 PF10502 Signal peptidase, peptidase S26 DN405_15120 PF03932 CutC family DN405_15135 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DN405_15135 PF02770 Acyl-CoA dehydrogenase, middle domain DN405_15135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN405_15165 PF10903 Protein of unknown function (DUF2691) DN405_15170 PF02915 Rubrerythrin DN405_15185 PF00440 Bacterial regulatory proteins, tetR family DN405_15190 PF05547 Immune inhibitor A peptidase M6 DN405_15195 PF00391 PEP-utilising enzyme, mobile domain DN405_15195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN405_15200 PF00753 Metallo-beta-lactamase superfamily DN405_15205 PF10710 Protein of unknown function (DUF2512) DN405_15210 PF11553 Protein of unknown function (DUF3231) DN405_15215 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN405_15220 PF08240 Alcohol dehydrogenase GroES-like domain DN405_15220 PF13823 Alcohol dehydrogenase GroES-associated DN405_15220 PF00107 Zinc-binding dehydrogenase DN405_15225 PF00206 Lyase DN405_15225 PF10415 Fumarase C C-terminus DN405_15230 PF00710 Asparaginase, N-terminal DN405_15230 PF17763 Glutaminase/Asparaginase C-terminal domain DN405_15235 PF01381 Helix-turn-helix DN405_15255 PF05504 Spore germination B3/ GerAC like, C-terminal DN405_15260 PF03845 Spore germination protein DN405_15265 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_15270 PF00989 PAS fold DN405_15270 PF00512 His Kinase A (phospho-acceptor) domain DN405_15270 PF13188 PAS domain DN405_15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_15270 PF13426 PAS domain DN405_15275 PF05791 Bacillus haemolytic enterotoxin (HBL) DN405_15280 PF05791 Bacillus haemolytic enterotoxin (HBL) DN405_15295 PF12833 Helix-turn-helix domain DN405_15295 PF17853 GGDEF-like domain DN405_15315 PF01541 GIY-YIG catalytic domain DN405_15315 PF12826 Helix-hairpin-helix motif DN405_15315 PF02151 UvrB/uvrC motif DN405_15315 PF08459 UvrC Helix-hairpin-helix N-terminal DN405_15320 PF13520 Amino acid permease DN405_15325 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN405_15325 PF03807 NADP oxidoreductase coenzyme F420-dependent DN405_15330 PF05504 Spore germination B3/ GerAC like, C-terminal DN405_15335 PF03845 Spore germination protein DN405_15340 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_15345 PF00072 Response regulator receiver domain DN405_15345 PF08664 YcbB domain DN405_15350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_15355 PF04960 Glutaminase DN405_15360 PF01235 Sodium:alanine symporter family DN405_15375 PF00144 Beta-lactamase DN405_15390 PF02872 5'-nucleotidase, C-terminal domain DN405_15390 PF17936 Bacterial Ig domain DN405_15390 PF00149 Calcineurin-like phosphoesterase DN405_15395 PF00561 alpha/beta hydrolase fold DN405_15400 PF00857 Isochorismatase family DN405_15415 PF01979 Amidohydrolase family DN405_15420 PF03466 LysR substrate binding domain DN405_15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_15425 PF01047 MarR family DN405_15430 PF01544 CorA-like Mg2+ transporter protein DN405_15450 PF12146 Serine aminopeptidase, S33 DN405_15450 PF13026 Protein of unknown function (DUF3887) DN405_15465 PF03073 TspO/MBR family DN405_15470 PF00875 DNA photolyase DN405_15470 PF03441 FAD binding domain of DNA photolyase DN405_15490 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DN405_15495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN405_15495 PF00361 Proton-conducting membrane transporter DN405_15500 PF10057 Uncharacterized conserved protein (DUF2294) DN405_15505 PF01522 Polysaccharide deacetylase DN405_15515 PF01040 UbiA prenyltransferase family DN405_15530 PF01872 RibD C-terminal domain DN405_15540 PF07690 Major Facilitator Superfamily DN405_15545 PF00144 Beta-lactamase DN405_15555 PF00550 Phosphopantetheine attachment site DN405_15555 PF07993 Male sterility protein DN405_15560 PF18665 Tetracyclin repressor-like, C-terminal domain DN405_15560 PF00440 Bacterial regulatory proteins, tetR family DN405_15565 PF07690 Major Facilitator Superfamily DN405_15570 PF00440 Bacterial regulatory proteins, tetR family DN405_15580 PF01037 Lrp/AsnC ligand binding domain DN405_15595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_15605 PF00144 Beta-lactamase DN405_15610 PF08803 Putative mono-oxygenase ydhR DN405_15620 PF12802 MarR family DN405_15645 PF00175 Oxidoreductase NAD-binding domain DN405_15645 PF00067 Cytochrome P450 DN405_15645 PF00258 Flavodoxin DN405_15645 PF00667 FAD binding domain DN405_15650 PF07690 Major Facilitator Superfamily DN405_15665 PF00291 Pyridoxal-phosphate dependent enzyme DN405_15675 PF01139 tRNA-splicing ligase RtcB DN405_15685 PF04072 Leucine carboxyl methyltransferase DN405_15700 PF00005 ABC transporter DN405_15705 PF02687 FtsX-like permease family DN405_15725 PF00672 HAMP domain DN405_15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_15725 PF00512 His Kinase A (phospho-acceptor) domain DN405_15730 PF00486 Transcriptional regulatory protein, C terminal DN405_15730 PF00072 Response regulator receiver domain DN405_15735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_15735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_15745 PF17676 LD-carboxypeptidase C-terminal domain DN405_15745 PF02016 LD-carboxypeptidase N-terminal domain DN405_15770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN405_15770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN405_15770 PF01842 ACT domain DN405_15775 PF00266 Aminotransferase class-V DN405_15800 PF01804 Penicillin amidase DN405_15815 PF01471 Putative peptidoglycan binding domain DN405_15815 PF01476 LysM domain DN405_15815 PF01510 N-acetylmuramoyl-L-alanine amidase DN405_15920 PF02557 D-alanyl-D-alanine carboxypeptidase DN405_15925 PF09587 Bacterial capsule synthesis protein PGA_cap DN405_15930 PF14044 NETI protein DN405_15935 PF07690 Major Facilitator Superfamily DN405_15945 PF12697 Alpha/beta hydrolase family DN405_15950 PF01047 MarR family DN405_15955 PF07690 Major Facilitator Superfamily DN405_15960 PF00144 Beta-lactamase DN405_15965 PF02667 Short chain fatty acid transporter DN405_15975 PF02525 Flavodoxin-like fold DN405_15995 PF14256 YwiC-like protein DN405_16005 PF00005 ABC transporter DN405_16025 PF03737 Aldolase/RraA DN405_16030 PF03606 C4-dicarboxylate anaerobic carrier DN405_16035 PF04231 Endonuclease I DN405_16060 PF04073 Aminoacyl-tRNA editing domain DN405_16065 PF03129 Anticodon binding domain DN405_16065 PF13393 Histidyl-tRNA synthetase DN405_16080 PF01638 HxlR-like helix-turn-helix DN405_16085 PF00881 Nitroreductase family DN405_16095 PF00224 Pyruvate kinase, barrel domain DN405_16095 PF00391 PEP-utilising enzyme, mobile domain DN405_16095 PF02887 Pyruvate kinase, alpha/beta domain DN405_16125 PF00005 ABC transporter DN405_16155 PF13419 Haloacid dehalogenase-like hydrolase DN405_16185 PF13344 Haloacid dehalogenase-like hydrolase DN405_16185 PF00293 NUDIX domain DN405_16190 PF00579 tRNA synthetases class I (W and Y) DN405_16200 PF01594 AI-2E family transporter DN405_16225 PF08003 Protein of unknown function (DUF1698) DN405_16255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_16265 PF01595 Cyclin M transmembrane N-terminal domain DN405_16265 PF03471 Transporter associated domain DN405_16265 PF00571 CBS domain DN405_16270 PF13411 MerR HTH family regulatory protein DN405_16280 PF00483 Nucleotidyl transferase DN405_16285 PF16363 GDP-mannose 4,6 dehydratase DN405_16290 PF08484 C-methyltransferase C-terminal domain DN405_16290 PF08421 Putative zinc binding domain DN405_16295 PF01370 NAD dependent epimerase/dehydratase family DN405_16310 PF00892 EamA-like transporter family DN405_16320 PF00805 Pentapeptide repeats (8 copies) DN405_16325 PF06906 Protein of unknown function (DUF1272) DN405_16330 PF10282 Lactonase, 7-bladed beta-propeller DN405_16335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN405_16335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN405_16340 PF02447 GntP family permease DN405_16345 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN405_16350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN405_16350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN405_16355 PF00456 Transketolase, thiamine diphosphate binding domain DN405_16355 PF02780 Transketolase, C-terminal domain DN405_16355 PF02779 Transketolase, pyrimidine binding domain DN405_16360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN405_16360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN405_16365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN405_16365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN405_16375 PF08240 Alcohol dehydrogenase GroES-like domain DN405_16375 PF00107 Zinc-binding dehydrogenase DN405_16380 PF00296 Luciferase-like monooxygenase DN405_16385 PF13411 MerR HTH family regulatory protein DN405_16390 PF00106 short chain dehydrogenase DN405_16395 PF00550 Phosphopantetheine attachment site DN405_16395 PF16197 Ketoacyl-synthetase C-terminal extension DN405_16395 PF00107 Zinc-binding dehydrogenase DN405_16395 PF08240 Alcohol dehydrogenase GroES-like domain DN405_16395 PF00698 Acyl transferase domain DN405_16395 PF00109 Beta-ketoacyl synthase, N-terminal domain DN405_16395 PF02801 Beta-ketoacyl synthase, C-terminal domain DN405_16395 PF08659 KR domain DN405_16395 PF14765 Polyketide synthase dehydratase DN405_16400 PF00106 short chain dehydrogenase DN405_16405 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN405_16405 PF03413 Peptidase propeptide and YPEB domain DN405_16405 PF01447 Thermolysin metallopeptidase, catalytic domain DN405_16405 PF07504 Fungalysin/Thermolysin Propeptide Motif DN405_16415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_16415 PF12729 Four helix bundle sensory module for signal transduction DN405_16415 PF00672 HAMP domain DN405_16420 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DN405_16425 PF01872 RibD C-terminal domain DN405_16425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN405_16430 PF00925 GTP cyclohydrolase II DN405_16435 PF01638 HxlR-like helix-turn-helix DN405_16450 PF00248 Aldo/keto reductase family DN405_16455 PF07690 Major Facilitator Superfamily DN405_16465 PF03928 Haem-degrading DN405_16480 PF03831 PhnA domain DN405_16480 PF08274 PhnA Zinc-Ribbon DN405_16485 PF01740 STAS domain DN405_16485 PF00916 Sulfate permease family DN405_16530 PF03960 ArsC family DN405_16535 PF01638 HxlR-like helix-turn-helix DN405_16540 PF07702 UTRA domain DN405_16540 PF00392 Bacterial regulatory proteins, gntR family DN405_16545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN405_16545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN405_16555 PF01638 HxlR-like helix-turn-helix DN405_16560 PF01638 HxlR-like helix-turn-helix DN405_16565 PF00248 Aldo/keto reductase family DN405_16605 PF02567 Phenazine biosynthesis-like protein DN405_16610 PF13193 AMP-binding enzyme C-terminal domain DN405_16610 PF00501 AMP-binding enzyme DN405_16615 PF02525 Flavodoxin-like fold DN405_16620 PF01638 HxlR-like helix-turn-helix DN405_16625 PF01022 Bacterial regulatory protein, arsR family DN405_16630 PF01522 Polysaccharide deacetylase DN405_16630 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DN405_16635 PF12791 Anti-sigma factor N-terminus DN405_16640 PF04542 Sigma-70 region 2 DN405_16645 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DN405_16645 PF00535 Glycosyl transferase family 2 DN405_16655 PF00440 Bacterial regulatory proteins, tetR family DN405_16655 PF13977 BetI-type transcriptional repressor, C-terminal DN405_16660 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN405_16685 PF01810 LysE type translocator DN405_16705 PF01061 ABC-2 type transporter DN405_16710 PF13732 Domain of unknown function (DUF4162) DN405_16710 PF00005 ABC transporter DN405_16730 PF03063 Prismane/CO dehydrogenase family DN405_16735 PF00753 Metallo-beta-lactamase superfamily DN405_16790 PF00753 Metallo-beta-lactamase superfamily DN405_16800 PF00324 Amino acid permease DN405_16805 PF07690 Major Facilitator Superfamily DN405_16840 PF02585 GlcNAc-PI de-N-acetylase DN405_16845 PF08830 Protein of unknown function (DUF1806) DN405_16850 PF03600 Citrate transporter DN405_16860 PF00583 Acetyltransferase (GNAT) family DN405_16865 PF01497 Periplasmic binding protein DN405_16870 PF01032 FecCD transport family DN405_16875 PF01032 FecCD transport family DN405_16880 PF05675 Protein of unknown function (DUF817) DN405_16885 PF13170 Protein of unknown function (DUF4003) DN405_16900 PF13302 Acetyltransferase (GNAT) domain DN405_16905 PF10901 Protein of unknown function (DUF2690) DN405_16915 PF03466 LysR substrate binding domain DN405_16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_16920 PF08240 Alcohol dehydrogenase GroES-like domain DN405_16920 PF00107 Zinc-binding dehydrogenase DN405_16935 PF01713 Smr domain DN405_16935 PF00488 MutS domain V DN405_16940 PF00128 Alpha amylase, catalytic domain DN405_16940 PF09154 Domain of unknown function (DUF1939) DN405_16945 PF00797 N-acetyltransferase DN405_16950 PF01432 Peptidase family M3 DN405_16950 PF08439 Oligopeptidase F DN405_16955 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN405_16960 PF07969 Amidohydrolase family DN405_16975 PF01062 Bestrophin, RFP-TM, chloride channel DN405_16980 PF06146 Phosphate-starvation-inducible E DN405_16985 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN405_16995 PF00144 Beta-lactamase DN405_17010 PF03466 LysR substrate binding domain DN405_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_17020 PF03009 Glycerophosphoryl diester phosphodiesterase family DN405_17025 PF01494 FAD binding domain DN405_17030 PF01022 Bacterial regulatory protein, arsR family DN405_17035 PF00107 Zinc-binding dehydrogenase DN405_17035 PF08240 Alcohol dehydrogenase GroES-like domain DN405_17040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DN405_17045 PF18801 response regulator aspartate phosphatase H, N terminal DN405_17060 PF02913 FAD linked oxidases, C-terminal domain DN405_17060 PF01565 FAD binding domain DN405_17085 PF01066 CDP-alcohol phosphatidyltransferase DN405_17095 PF00581 Rhodanese-like domain DN405_17095 PF00753 Metallo-beta-lactamase superfamily DN405_17100 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_17110 PF00483 Nucleotidyl transferase DN405_17120 PF01370 NAD dependent epimerase/dehydratase family DN405_17125 PF16363 GDP-mannose 4,6 dehydratase DN405_17130 PF01385 Probable transposase DN405_17130 PF12323 Helix-turn-helix domain DN405_17130 PF07282 Putative transposase DNA-binding domain DN405_17135 PF18801 response regulator aspartate phosphatase H, N terminal DN405_17140 PF02743 Cache domain DN405_17140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_17140 PF00672 HAMP domain DN405_17165 PF00440 Bacterial regulatory proteins, tetR family DN405_17170 PF07968 Leukocidin/Hemolysin toxin family DN405_17175 PF00395 S-layer homology domain DN405_17175 PF01520 N-acetylmuramoyl-L-alanine amidase DN405_17200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_17200 PF00989 PAS fold DN405_17200 PF00512 His Kinase A (phospho-acceptor) domain DN405_17205 PF08453 Peptidase family M9 N-terminal DN405_17205 PF01752 Collagenase DN405_17205 PF18496 Collagenase G catalytic helper subdomain DN405_17210 PF02308 MgtC family DN405_17220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_17225 PF04294 VanW like protein DN405_17235 PF13037 Domain of unknown function (DUF3898) DN405_17235 PF13039 Protein of unknown function (DUF3900) DN405_17250 PF00313 'Cold-shock' DNA-binding domain DN405_17260 PF00258 Flavodoxin DN405_17270 PF00293 NUDIX domain DN405_17280 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_17290 PF00106 short chain dehydrogenase DN405_17300 PF00206 Lyase DN405_17300 PF14698 Argininosuccinate lyase C-terminal DN405_17310 PF01156 Inosine-uridine preferring nucleoside hydrolase DN405_17315 PF00474 Sodium:solute symporter family DN405_17325 PF00171 Aldehyde dehydrogenase family DN405_17335 PF14151 YfhD-like protein DN405_17340 PF13249 Squalene-hopene cyclase N-terminal domain DN405_17340 PF13243 Squalene-hopene cyclase C-terminal domain DN405_17345 PF02681 Divergent PAP2 family DN405_17350 PF00892 EamA-like transporter family DN405_17355 PF06961 Protein of unknown function (DUF1294) DN405_17370 PF10609 NUBPL iron-transfer P-loop NTPase DN405_17380 PF02391 MoaE protein DN405_17385 PF03453 MoeA N-terminal region (domain I and II) DN405_17385 PF03454 MoeA C-terminal region (domain IV) DN405_17385 PF00994 Probable molybdopterin binding domain DN405_17390 PF00899 ThiF family DN405_17395 PF01226 Formate/nitrite transporter DN405_17400 PF06463 Molybdenum Cofactor Synthesis C DN405_17400 PF04055 Radical SAM superfamily DN405_17405 PF02634 FdhD/NarQ family DN405_17410 PF10057 Uncharacterized conserved protein (DUF2294) DN405_17415 PF07849 Protein of unknown function (DUF1641) DN405_17420 PF01568 Molydopterin dinucleotide binding domain DN405_17420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN405_17420 PF00037 4Fe-4S binding domain DN405_17420 PF00384 Molybdopterin oxidoreductase DN405_17420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN405_17425 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_17440 PF13520 Amino acid permease DN405_17475 PF08241 Methyltransferase domain DN405_17480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_17485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_17490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_17495 PF00375 Sodium:dicarboxylate symporter family DN405_17500 PF03816 Cell envelope-related transcriptional attenuator domain DN405_17510 PF08281 Sigma-70, region 4 DN405_17510 PF04542 Sigma-70 region 2 DN405_17520 PF13732 Domain of unknown function (DUF4162) DN405_17520 PF00005 ABC transporter DN405_17530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN405_17530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN405_17535 PF03989 DNA gyrase C-terminal domain, beta-propeller DN405_17535 PF00521 DNA gyrase/topoisomerase IV, subunit A DN405_17540 PF00986 DNA gyrase B subunit, carboxyl terminus DN405_17540 PF01751 Toprim domain DN405_17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_17540 PF00204 DNA gyrase B DN405_17545 PF13380 CoA binding domain DN405_17550 PF13180 PDZ domain DN405_17555 PF00486 Transcriptional regulatory protein, C terminal DN405_17555 PF00072 Response regulator receiver domain DN405_17560 PF04055 Radical SAM superfamily DN405_17565 PF03477 ATP cone domain DN405_17565 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN405_17570 PF02660 Glycerol-3-phosphate acyltransferase DN405_17575 PF01521 Iron-sulphur cluster biosynthesis DN405_17580 PF03061 Thioesterase superfamily DN405_17585 PF01476 LysM domain DN405_17585 PF00704 Glycosyl hydrolases family 18 DN405_17595 PF08177 Small acid-soluble spore protein N family DN405_17600 PF13040 Fur-regulated basic protein B DN405_17605 PF02811 PHP domain DN405_17605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN405_17605 PF01336 OB-fold nucleic acid binding domain DN405_17605 PF11490 DNA polymerase III polC-type N-terminus II DN405_17605 PF00929 Exonuclease DN405_17605 PF14579 Helix-hairpin-helix motif DN405_17605 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN405_17610 PF00578 AhpC/TSA family DN405_17620 PF03412 Peptidase C39 family DN405_17620 PF00005 ABC transporter DN405_17620 PF00664 ABC transporter transmembrane region DN405_17625 PF00330 Aconitase family (aconitate hydratase) DN405_17625 PF00694 Aconitase C-terminal domain DN405_17635 PF01522 Polysaccharide deacetylase DN405_17645 PF08179 Small acid-soluble spore protein P family DN405_17655 PF07690 Major Facilitator Superfamily DN405_17665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN405_17665 PF02272 DHHA1 domain DN405_17665 PF01411 tRNA synthetases class II (A) DN405_17670 PF00293 NUDIX domain DN405_17670 PF13344 Haloacid dehalogenase-like hydrolase DN405_17680 PF02803 Thiolase, C-terminal domain DN405_17680 PF00108 Thiolase, N-terminal domain DN405_17685 PF00501 AMP-binding enzyme DN405_17685 PF13193 AMP-binding enzyme C-terminal domain DN405_17690 PF02632 BioY family DN405_17695 PF00501 AMP-binding enzyme DN405_17695 PF13193 AMP-binding enzyme C-terminal domain DN405_17720 PF05532 CsbD-like DN405_17725 PF03824 High-affinity nickel-transport protein DN405_17730 PF02293 AmiS/UreI family transporter DN405_17735 PF01774 UreD urease accessory protein DN405_17740 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN405_17745 PF01730 UreF DN405_17750 PF02814 UreE urease accessory protein, N-terminal domain DN405_17750 PF05194 UreE urease accessory protein, C-terminal domain DN405_17755 PF01979 Amidohydrolase family DN405_17755 PF00449 Urease alpha-subunit, N-terminal domain DN405_17760 PF00699 Urease beta subunit DN405_17765 PF00547 Urease, gamma subunit DN405_17785 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_17785 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_17800 PF00989 PAS fold DN405_17800 PF13426 PAS domain DN405_17800 PF00512 His Kinase A (phospho-acceptor) domain DN405_17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_17800 PF13188 PAS domain DN405_17805 PF01738 Dienelactone hydrolase family DN405_17810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_17815 PF00474 Sodium:solute symporter family DN405_17825 PF01645 Conserved region in glutamate synthase DN405_17830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN405_17835 PF02559 CarD-like/TRCF domain DN405_17840 PF00491 Arginase family DN405_17845 PF01979 Amidohydrolase family DN405_17850 PF01175 Urocanase Rossmann-like domain DN405_17850 PF17391 Urocanase N-terminal domain DN405_17850 PF17392 Urocanase C-terminal domain DN405_17855 PF00221 Aromatic amino acid lyase DN405_17860 PF09021 HutP DN405_17890 PF11084 Protein of unknown function (DUF2621) DN405_17895 PF07301 Protein of unknown function (DUF1453) DN405_17900 PF02683 Cytochrome C biogenesis protein transmembrane region DN405_17925 PF00005 ABC transporter DN405_17940 PF03466 LysR substrate binding domain DN405_17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_17945 PF03788 LrgA family DN405_17950 PF04172 LrgB-like family DN405_17955 PF13344 Haloacid dehalogenase-like hydrolase DN405_17955 PF00293 NUDIX domain DN405_17965 PF01925 Sulfite exporter TauE/SafE DN405_17985 PF01183 Glycosyl hydrolases family 25 DN405_17985 PF08239 Bacterial SH3 domain DN405_17990 PF00005 ABC transporter DN405_17990 PF00664 ABC transporter transmembrane region DN405_17995 PF00005 ABC transporter DN405_17995 PF00664 ABC transporter transmembrane region DN405_18000 PF03672 Uncharacterised protein family (UPF0154) DN405_18005 PF10747 Sporulation inhibitor of replication protein SirA DN405_18010 PF02780 Transketolase, C-terminal domain DN405_18010 PF02779 Transketolase, pyrimidine binding domain DN405_18010 PF00456 Transketolase, thiamine diphosphate binding domain DN405_18015 PF00528 Binding-protein-dependent transport system inner membrane component DN405_18020 PF00528 Binding-protein-dependent transport system inner membrane component DN405_18025 PF00005 ABC transporter DN405_18030 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN405_18035 PF00149 Calcineurin-like phosphoesterase DN405_18035 PF02872 5'-nucleotidase, C-terminal domain DN405_18040 PF05979 Bacterial protein of unknown function (DUF896) DN405_18045 PF00239 Resolvase, N terminal domain DN405_18050 PF01726 LexA DNA binding domain DN405_18050 PF00717 Peptidase S24-like DN405_18065 PF03551 Transcriptional regulator PadR-like family DN405_18075 PF01510 N-acetylmuramoyl-L-alanine amidase DN405_18075 PF01471 Putative peptidoglycan binding domain DN405_18075 PF01476 LysM domain DN405_18080 PF04225 Opacity-associated protein A LysM-like domain DN405_18080 PF01551 Peptidase family M23 DN405_18115 PF01726 LexA DNA binding domain DN405_18115 PF00717 Peptidase S24-like DN405_18120 PF03951 Glutamine synthetase, beta-Grasp domain DN405_18120 PF00120 Glutamine synthetase, catalytic domain DN405_18125 PF13411 MerR HTH family regulatory protein DN405_18130 PF06838 Methionine gamma-lyase DN405_18135 PF01926 50S ribosome-binding GTPase DN405_18135 PF16360 GTP-binding GTPase Middle Region DN405_18135 PF13167 GTP-binding GTPase N-terminal DN405_18140 PF03458 UPF0126 domain DN405_18145 PF00004 ATPase family associated with various cellular activities (AAA) DN405_18145 PF17866 AAA lid domain DN405_18160 PF17209 Hfq protein DN405_18175 PF01476 LysM domain DN405_18175 PF06725 3D domain DN405_18180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN405_18180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN405_18185 PF00294 pfkB family carbohydrate kinase DN405_18190 PF00455 DeoR C terminal sensor domain DN405_18190 PF08220 DeoR-like helix-turn-helix domain DN405_18195 PF00465 Iron-containing alcohol dehydrogenase DN405_18200 PF04238 Protein of unknown function (DUF420) DN405_18210 PF00324 Amino acid permease DN405_18220 PF00041 Fibronectin type III domain DN405_18220 PF00704 Glycosyl hydrolases family 18 DN405_18225 PF00149 Calcineurin-like phosphoesterase DN405_18225 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN405_18230 PF01226 Formate/nitrite transporter DN405_18235 PF00216 Bacterial DNA-binding protein DN405_18245 PF00403 Heavy-metal-associated domain DN405_18250 PF00403 Heavy-metal-associated domain DN405_18255 PF02583 Metal-sensitive transcriptional repressor DN405_18265 PF00756 Putative esterase DN405_18270 PF00005 ABC transporter DN405_18275 PF01032 FecCD transport family DN405_18280 PF01032 FecCD transport family DN405_18285 PF01497 Periplasmic binding protein DN405_18300 PF12833 Helix-turn-helix domain DN405_18300 PF02805 Metal binding domain of Ada DN405_18305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN405_18305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN405_18310 PF00730 HhH-GPD superfamily base excision DNA repair protein DN405_18310 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DN405_18315 PF01546 Peptidase family M20/M25/M40 DN405_18315 PF07687 Peptidase dimerisation domain DN405_18335 PF00561 alpha/beta hydrolase fold DN405_18340 PF03707 Bacterial signalling protein N terminal repeat DN405_18340 PF00563 EAL domain DN405_18340 PF00990 Diguanylate cyclase, GGDEF domain DN405_18345 PF03033 Glycosyltransferase family 28 N-terminal domain DN405_18345 PF04101 Glycosyltransferase family 28 C-terminal domain DN405_18355 PF16363 GDP-mannose 4,6 dehydratase DN405_18360 PF02719 Polysaccharide biosynthesis protein DN405_18360 PF08485 Polysaccharide biosynthesis protein C-terminal DN405_18375 PF10787 Uncharacterised protein from bacillus cereus group DN405_18380 PF04172 LrgB-like family DN405_18385 PF03788 LrgA family DN405_18390 PF00392 Bacterial regulatory proteins, gntR family DN405_18390 PF00155 Aminotransferase class I and II DN405_18395 PF00561 alpha/beta hydrolase fold DN405_18400 PF02585 GlcNAc-PI de-N-acetylase DN405_18410 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN405_18415 PF00082 Subtilase family DN405_18420 PF07486 Cell Wall Hydrolase DN405_18435 PF00884 Sulfatase DN405_18440 PF00350 Dynamin family DN405_18450 PF01119 DNA mismatch repair protein, C-terminal domain DN405_18450 PF08676 MutL C terminal dimerisation domain DN405_18455 PF05188 MutS domain II DN405_18455 PF00488 MutS domain V DN405_18455 PF05190 MutS family domain IV DN405_18455 PF05192 MutS domain III DN405_18455 PF01624 MutS domain I DN405_18460 PF10628 Outer spore coat protein E (CotE) DN405_18465 PF06133 Control of competence regulator ComK, YlbF/YmcA DN405_18470 PF04055 Radical SAM superfamily DN405_18470 PF01938 TRAM domain DN405_18470 PF00919 Uncharacterized protein family UPF0004 DN405_18475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN405_18480 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN405_18480 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN405_18480 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN405_18485 PF01244 Membrane dipeptidase (Peptidase family M19) DN405_18490 PF04232 Stage V sporulation protein S (SpoVS) DN405_18495 PF13277 YmdB-like protein DN405_18500 PF00013 KH domain DN405_18500 PF12072 Domain of unknown function (DUF3552) DN405_18500 PF01966 HD domain DN405_18505 PF00154 recA bacterial DNA recombination protein DN405_18510 PF00994 Probable molybdopterin binding domain DN405_18510 PF02464 Competence-damaged protein DN405_18510 PF18146 Damage-inducible protein CinA KH domain DN405_18515 PF01066 CDP-alcohol phosphatidyltransferase DN405_18520 PF13464 Domain of unknown function (DUF4115) DN405_18525 PF11868 Protein of unknown function (DUF3388) DN405_18530 PF11588 Protein of unknown function (DUF3243) DN405_18540 PF00675 Insulinase (Peptidase family M16) DN405_18540 PF05193 Peptidase M16 inactive domain DN405_18545 PF05193 Peptidase M16 inactive domain DN405_18570 PF00392 Bacterial regulatory proteins, gntR family DN405_18570 PF07702 UTRA domain DN405_18580 PF09397 Ftsk gamma domain DN405_18580 PF17854 FtsK alpha domain DN405_18580 PF01580 FtsK/SpoIIIE family DN405_18585 PF14035 YlzJ-like protein DN405_18590 PF00574 Clp protease DN405_18595 PF00753 Metallo-beta-lactamase superfamily DN405_18595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN405_18595 PF17770 Ribonuclease J C-terminal domain DN405_18600 PF00701 Dihydrodipicolinate synthetase family DN405_18605 PF13840 ACT domain DN405_18605 PF00696 Amino acid kinase family DN405_18610 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN405_18610 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN405_18615 PF02441 Flavoprotein DN405_18620 PF16924 Dipicolinate synthase subunit A N-terminal domain DN405_18620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN405_18625 PF05239 PRC-barrel domain DN405_18630 PF00675 Insulinase (Peptidase family M16) DN405_18630 PF05193 Peptidase M16 inactive domain DN405_18635 PF01522 Polysaccharide deacetylase DN405_18640 PF01138 3' exoribonuclease family, domain 1 DN405_18640 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DN405_18640 PF00013 KH domain DN405_18640 PF03725 3' exoribonuclease family, domain 2 DN405_18640 PF00575 S1 RNA binding domain DN405_18645 PF00312 Ribosomal protein S15 DN405_18650 PF06574 FAD synthetase DN405_18650 PF01687 Riboflavin kinase DN405_18655 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN405_18655 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN405_18660 PF02033 Ribosome-binding factor A DN405_18665 PF04456 Protein of unknown function (DUF503) DN405_18670 PF04760 Translation initiation factor IF-2, N-terminal region DN405_18670 PF11987 Translation-initiation factor 2 DN405_18670 PF00009 Elongation factor Tu GTP binding domain DN405_18675 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN405_18680 PF04296 Protein of unknown function (DUF448) DN405_18685 PF08529 NusA N-terminal domain DN405_18685 PF00575 S1 RNA binding domain DN405_18685 PF13184 NusA-like KH domain DN405_18690 PF02576 RimP N-terminal domain DN405_18690 PF17384 RimP C-terminal SH3 domain DN405_18695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN405_18695 PF00929 Exonuclease DN405_18695 PF14480 DNA polymerase III polC-type N-terminus I DN405_18695 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN405_18695 PF14579 Helix-hairpin-helix motif DN405_18695 PF11490 DNA polymerase III polC-type N-terminus II DN405_18695 PF02811 PHP domain DN405_18700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN405_18700 PF03129 Anticodon binding domain DN405_18700 PF04073 Aminoacyl-tRNA editing domain DN405_18705 PF02163 Peptidase family M50 DN405_18705 PF17820 PDZ domain DN405_18710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN405_18710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN405_18710 PF13288 DXP reductoisomerase C-terminal domain DN405_18720 PF01255 Putative undecaprenyl diphosphate synthase DN405_18725 PF01765 Ribosome recycling factor DN405_18730 PF00696 Amino acid kinase family DN405_18735 PF00889 Elongation factor TS DN405_18740 PF00318 Ribosomal protein S2 DN405_18745 PF08222 CodY helix-turn-helix domain DN405_18745 PF06018 CodY GAF-like domain DN405_18750 PF10431 C-terminal, D2-small domain, of ClpB protein DN405_18750 PF07724 AAA domain (Cdc48 subfamily) DN405_18750 PF00004 ATPase family associated with various cellular activities (AAA) DN405_18755 PF00227 Proteasome subunit DN405_18760 PF02899 Phage integrase, N-terminal SAM-like domain DN405_18760 PF00589 Phage integrase family DN405_18765 PF01134 Glucose inhibited division protein A DN405_18770 PF01131 DNA topoisomerase DN405_18770 PF01751 Toprim domain DN405_18770 PF01396 Topoisomerase DNA binding C4 zinc finger DN405_18775 PF02481 DNA recombination-mediator protein A DN405_18780 PF00549 CoA-ligase DN405_18780 PF02629 CoA binding domain DN405_18785 PF00549 CoA-ligase DN405_18785 PF08442 ATP-grasp domain DN405_18790 PF01351 Ribonuclease HII DN405_18795 PF01926 50S ribosome-binding GTPase DN405_18800 PF10502 Signal peptidase, peptidase S26 DN405_18805 PF01245 Ribosomal protein L19 DN405_18810 PF01746 tRNA (Guanine-1)-methyltransferase DN405_18815 PF01782 RimM N-terminal domain DN405_18815 PF05239 PRC-barrel domain DN405_18825 PF00886 Ribosomal protein S16 DN405_18830 PF02978 Signal peptide binding domain DN405_18830 PF00448 SRP54-type protein, GTPase domain DN405_18830 PF02881 SRP54-type protein, helical bundle domain DN405_18835 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DN405_18840 PF02881 SRP54-type protein, helical bundle domain DN405_18840 PF00448 SRP54-type protein, GTPase domain DN405_18845 PF06470 SMC proteins Flexible Hinge Domain DN405_18845 PF02463 RecF/RecN/SMC N terminal domain DN405_18850 PF14622 Ribonuclease-III-like DN405_18850 PF00035 Double-stranded RNA binding motif DN405_18855 PF00550 Phosphopantetheine attachment site DN405_18865 PF00698 Acyl transferase domain DN405_18870 PF02504 Fatty acid synthesis protein DN405_18875 PF03061 Thioesterase superfamily DN405_18880 PF17191 RecG wedge domain DN405_18880 PF00271 Helicase conserved C-terminal domain DN405_18880 PF00270 DEAD/DEAH box helicase DN405_18885 PF02734 DAK2 domain DN405_18885 PF13684 Dihydroxyacetone kinase family DN405_18890 PF03780 Asp23 family, cell envelope-related function DN405_18895 PF00830 Ribosomal L28 family DN405_18900 PF08183 Stage V sporulation protein family DN405_18905 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DN405_18905 PF04263 Thiamin pyrophosphokinase, catalytic domain DN405_18910 PF00834 Ribulose-phosphate 3 epimerase family DN405_18915 PF16745 RsgA N-terminal domain DN405_18915 PF03193 RsgA GTPase DN405_18920 PF00069 Protein kinase domain DN405_18920 PF03793 PASTA domain DN405_18930 PF04055 Radical SAM superfamily DN405_18935 PF01029 NusB family DN405_18935 PF01189 16S rRNA methyltransferase RsmB/F DN405_18940 PF02911 Formyl transferase, C-terminal domain DN405_18940 PF00551 Formyl transferase DN405_18945 PF01327 Polypeptide deformylase DN405_18950 PF18074 Primosomal protein N C-terminal domain DN405_18950 PF17764 3′ DNA-binding domain (3′BD) DN405_18950 PF04851 Type III restriction enzyme, res subunit DN405_18950 PF00271 Helicase conserved C-terminal domain DN405_18950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN405_18955 PF02441 Flavoprotein DN405_18955 PF04127 DNA / pantothenate metabolism flavoprotein DN405_18960 PF01192 RNA polymerase Rpb6 DN405_18965 PF00625 Guanylate kinase DN405_18970 PF04025 Domain of unknown function (DUF370) DN405_18975 PF08340 Domain of unknown function (DUF1732) DN405_18975 PF03755 YicC-like family, N-terminal region DN405_18980 PF00689 Cation transporting ATPase, C-terminus DN405_18980 PF00690 Cation transporter/ATPase, N-terminus DN405_18990 PF00557 Metallopeptidase family M24 DN405_18990 PF01321 Creatinase/Prolidase N-terminal domain DN405_19015 PF00156 Phosphoribosyl transferase domain DN405_19020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN405_19025 PF01180 Dihydroorotate dehydrogenase DN405_19030 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN405_19035 PF02142 MGS-like domain DN405_19035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN405_19035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN405_19040 PF00117 Glutamine amidotransferase class-I DN405_19040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN405_19045 PF01979 Amidohydrolase family DN405_19050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN405_19050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN405_19055 PF00860 Permease family DN405_19060 PF00156 Phosphoribosyl transferase domain DN405_19065 PF00849 RNA pseudouridylate synthase DN405_19065 PF01479 S4 domain DN405_19070 PF01252 Signal peptidase (SPase) II DN405_19080 PF06827 Zinc finger found in FPG and IleRS DN405_19080 PF00133 tRNA synthetases class I (I, L, M and V) DN405_19080 PF08264 Anticodon-binding domain of tRNA DN405_19085 PF05103 DivIVA protein DN405_19090 PF01479 S4 domain DN405_19090 PF17774 Putative RNA-binding domain in YlmH DN405_19095 PF02325 YGGT family DN405_19100 PF04472 Cell division protein SepF DN405_19105 PF01168 Alanine racemase, N-terminal domain DN405_19115 PF05239 PRC-barrel domain DN405_19120 PF04545 Sigma-70, region 4 DN405_19120 PF04539 Sigma-70 region 3 DN405_19120 PF04542 Sigma-70 region 2 DN405_19125 PF04545 Sigma-70, region 4 DN405_19125 PF04542 Sigma-70 region 2 DN405_19130 PF03419 Sporulation factor SpoIIGA DN405_19135 PF12327 FtsZ family, C-terminal domain DN405_19135 PF00091 Tubulin/FtsZ family, GTPase domain DN405_19140 PF02491 SHS2 domain inserted in FTSA DN405_19145 PF08478 POTRA domain, FtsQ-type DN405_19145 PF03799 Cell division protein FtsQ DN405_19150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN405_19150 PF01565 FAD binding domain DN405_19155 PF03033 Glycosyltransferase family 28 N-terminal domain DN405_19155 PF04101 Glycosyltransferase family 28 C-terminal domain DN405_19160 PF01098 Cell cycle protein DN405_19165 PF08245 Mur ligase middle domain DN405_19165 PF02875 Mur ligase family, glutamate ligase domain DN405_19170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DN405_19170 PF00953 Glycosyl transferase family 4 DN405_19175 PF08245 Mur ligase middle domain DN405_19175 PF01225 Mur ligase family, catalytic domain DN405_19175 PF02875 Mur ligase family, glutamate ligase domain DN405_19180 PF03717 Penicillin-binding Protein dimerisation domain DN405_19180 PF03793 PASTA domain DN405_19180 PF00905 Penicillin binding protein transpeptidase domain DN405_19190 PF04977 Septum formation initiator DN405_19195 PF01795 MraW methylase family DN405_19200 PF10079 Bacillithiol biosynthesis BshC DN405_19205 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN405_19205 PF02558 Ketopantoate reductase PanE/ApbA DN405_19210 PF00583 Acetyltransferase (GNAT) family DN405_19220 PF01783 Ribosomal L32p protein family DN405_19225 PF02620 Large ribosomal RNA subunit accumulation protein YceD DN405_19230 PF05636 HIGH Nucleotidyl Transferase DN405_19235 PF05362 Lon protease (S16) C-terminal proteolytic domain DN405_19235 PF13180 PDZ domain DN405_19240 PF01734 Patatin-like phospholipase DN405_19245 PF07670 Nucleoside recognition DN405_19250 PF01467 Cytidylyltransferase-like DN405_19265 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DN405_19270 PF06133 Control of competence regulator ComK, YlbF/YmcA DN405_19275 PF00300 Histidine phosphatase superfamily (branch 1) DN405_19280 PF14003 YlbE-like protein DN405_19285 PF14071 Putative coat protein DN405_19290 PF14504 CAP-associated N-terminal DN405_19290 PF00188 Cysteine-rich secretory protein family DN405_19295 PF08868 YugN-like family DN405_19300 PF00795 Carbon-nitrogen hydrolase DN405_19305 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DN405_19310 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DN405_19315 PF00510 Cytochrome c oxidase subunit III DN405_19320 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN405_19325 PF00034 Cytochrome c DN405_19325 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN405_19325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DN405_19330 PF01040 UbiA prenyltransferase family DN405_19335 PF02628 Cytochrome oxidase assembly protein DN405_19340 PF02436 Conserved carboxylase domain DN405_19340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN405_19340 PF00289 Biotin carboxylase, N-terminal domain DN405_19340 PF02785 Biotin carboxylase C-terminal domain DN405_19340 PF00364 Biotin-requiring enzyme DN405_19340 PF00682 HMGL-like DN405_19350 PF01098 Cell cycle protein DN405_19355 PF07408 Protein of unknown function (DUF1507) DN405_19365 PF13638 PIN domain DN405_19365 PF02562 PhoH-like protein DN405_19375 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DN405_19385 PF14036 YlaH-like protein DN405_19400 PF00459 Inositol monophosphatase family DN405_19410 PF06335 Protein of unknown function (DUF1054) DN405_19415 PF05256 Uncharacterised protein family (UPF0223) DN405_19420 PF01276 Orn/Lys/Arg decarboxylase, major domain DN405_19420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN405_19460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_19460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN405_19465 PF00364 Biotin-requiring enzyme DN405_19465 PF02817 e3 binding domain DN405_19465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN405_19470 PF02779 Transketolase, pyrimidine binding domain DN405_19470 PF02780 Transketolase, C-terminal domain DN405_19475 PF00676 Dehydrogenase E1 component DN405_19485 PF01327 Polypeptide deformylase DN405_19505 PF17770 Ribonuclease J C-terminal domain DN405_19505 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN405_19505 PF00753 Metallo-beta-lactamase superfamily DN405_19510 PF02080 TrkA-C domain DN405_19510 PF02254 TrkA-N domain DN405_19520 PF07687 Peptidase dimerisation domain DN405_19520 PF01546 Peptidase family M20/M25/M40 DN405_19525 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DN405_19525 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_19525 PF14602 Hexapeptide repeat of succinyl-transferase DN405_19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_19530 PF03466 LysR substrate binding domain DN405_19545 PF04308 Ribonuclease H-like DN405_19550 PF08796 Protein of unknown function (DUF1797) DN405_19565 PF10388 EAL-domain associated signalling protein domain DN405_19565 PF00563 EAL domain DN405_19575 PF00149 Calcineurin-like phosphoesterase DN405_19575 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN405_19585 PF02503 Polyphosphate kinase middle domain DN405_19585 PF13090 Polyphosphate kinase C-terminal domain 2 DN405_19585 PF17941 Polyphosphate kinase C-terminal domain 1 DN405_19585 PF13089 Polyphosphate kinase N-terminal domain DN405_19590 PF02541 Ppx/GppA phosphatase family DN405_19595 PF14177 YkyB-like protein DN405_19620 PF07690 Major Facilitator Superfamily DN405_19630 PF08267 Cobalamin-independent synthase, N-terminal domain DN405_19630 PF01717 Cobalamin-independent synthase, Catalytic domain DN405_19640 PF14040 Deoxyribonuclease NucA/NucB DN405_19650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_19650 PF00512 His Kinase A (phospho-acceptor) domain DN405_19660 PF00155 Aminotransferase class I and II DN405_19665 PF00356 Bacterial regulatory proteins, lacI family DN405_19665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN405_19670 PF00528 Binding-protein-dependent transport system inner membrane component DN405_19675 PF00528 Binding-protein-dependent transport system inner membrane component DN405_19680 PF13416 Bacterial extracellular solute-binding protein DN405_19685 PF16657 Maltogenic Amylase, C-terminal domain DN405_19685 PF02903 Alpha amylase, N-terminal ig-like domain DN405_19685 PF00128 Alpha amylase, catalytic domain DN405_19690 PF16657 Maltogenic Amylase, C-terminal domain DN405_19690 PF00128 Alpha amylase, catalytic domain DN405_19695 PF03459 TOBE domain DN405_19695 PF17912 MalK OB fold domain DN405_19695 PF00005 ABC transporter DN405_19735 PF00108 Thiolase, N-terminal domain DN405_19735 PF02803 Thiolase, C-terminal domain DN405_19740 PF00293 NUDIX domain DN405_19770 PF03551 Transcriptional regulator PadR-like family DN405_19790 PF01636 Phosphotransferase enzyme family DN405_19795 PF00795 Carbon-nitrogen hydrolase DN405_19800 PF00155 Aminotransferase class I and II DN405_19805 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DN405_19805 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DN405_19815 PF00596 Class II Aldolase and Adducin N-terminal domain DN405_19820 PF03079 ARD/ARD' family DN405_19835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN405_19835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN405_19840 PF00144 Beta-lactamase DN405_19845 PF00990 Diguanylate cyclase, GGDEF domain DN405_19850 PF00881 Nitroreductase family DN405_19865 PF00391 PEP-utilising enzyme, mobile domain DN405_19865 PF02896 PEP-utilising enzyme, TIM barrel domain DN405_19865 PF05524 PEP-utilising enzyme, N-terminal DN405_19870 PF00381 PTS HPr component phosphorylation site DN405_19875 PF02378 Phosphotransferase system, EIIC DN405_19875 PF00367 phosphotransferase system, EIIB DN405_19875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN405_19880 PF00874 PRD domain DN405_19880 PF03123 CAT RNA binding domain DN405_19895 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DN405_19900 PF01979 Amidohydrolase family DN405_19910 PF04079 Segregation and condensation complex subunit ScpB DN405_19920 PF02616 Segregation and condensation protein ScpA DN405_19930 PF03745 Domain of unknown function (DUF309) DN405_19935 PF00583 Acetyltransferase (GNAT) family DN405_19940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN405_19945 PF06207 Protein of unknown function (DUF1002) DN405_19955 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_19960 PF14097 Stage V sporulation protein AE1 DN405_19965 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN405_19970 PF07451 Stage V sporulation protein AD (SpoVAD) DN405_19975 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN405_19980 PF13782 Stage V sporulation protein AB DN405_19985 PF12164 Stage V sporulation protein AA DN405_19995 PF00209 Sodium:neurotransmitter symporter family DN405_20000 PF04539 Sigma-70 region 3 DN405_20000 PF04545 Sigma-70, region 4 DN405_20000 PF04542 Sigma-70 region 2 DN405_20005 PF13581 Histidine kinase-like ATPase domain DN405_20010 PF01740 STAS domain DN405_20015 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_20015 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_20025 PF00392 Bacterial regulatory proteins, gntR family DN405_20030 PF00005 ABC transporter DN405_20050 PF01047 MarR family DN405_20060 PF00860 Permease family DN405_20065 PF01544 CorA-like Mg2+ transporter protein DN405_20070 PF00591 Glycosyl transferase family, a/b domain DN405_20070 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN405_20070 PF02885 Glycosyl transferase family, helical bundle domain DN405_20075 PF01048 Phosphorylase superfamily DN405_20080 PF01676 Metalloenzyme superfamily DN405_20085 PF13115 YtkA-like DN405_20090 PF02899 Phage integrase, N-terminal SAM-like domain DN405_20090 PF00589 Phage integrase family DN405_20095 PF14004 Protein of unknown function (DUF4227) DN405_20100 PF01475 Ferric uptake regulator family DN405_20105 PF01944 Stage II sporulation protein M DN405_20115 PF00293 NUDIX domain DN405_20120 PF13072 Mother cell inhibitor of FtsZ DN405_20125 PF00248 Aldo/keto reductase family DN405_20130 PF00248 Aldo/keto reductase family DN405_20135 PF04229 GrpB protein DN405_20135 PF13673 Acetyltransferase (GNAT) domain DN405_20145 PF00746 LPXTG cell wall anchor motif DN405_20145 PF02872 5'-nucleotidase, C-terminal domain DN405_20145 PF00149 Calcineurin-like phosphoesterase DN405_20145 PF00565 Staphylococcal nuclease homologue DN405_20155 PF12146 Serine aminopeptidase, S33 DN405_20160 PF13726 Na+-H+ antiporter family DN405_20160 PF03553 Na+/H+ antiporter family DN405_20165 PF00356 Bacterial regulatory proteins, lacI family DN405_20170 PF00583 Acetyltransferase (GNAT) family DN405_20175 PF12146 Serine aminopeptidase, S33 DN405_20180 PF10827 Protein of unknown function (DUF2552) DN405_20190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN405_20190 PF01872 RibD C-terminal domain DN405_20195 PF00677 Lumazine binding domain DN405_20200 PF00925 GTP cyclohydrolase II DN405_20200 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DN405_20205 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN405_20215 PF04055 Radical SAM superfamily DN405_20215 PF06968 Biotin and Thiamin Synthesis associated domain DN405_20220 PF13847 Methyltransferase domain DN405_20225 PF08241 Methyltransferase domain DN405_20225 PF12697 Alpha/beta hydrolase family DN405_20230 PF00155 Aminotransferase class I and II DN405_20240 PF00202 Aminotransferase class-III DN405_20255 PF02872 5'-nucleotidase, C-terminal domain DN405_20255 PF00149 Calcineurin-like phosphoesterase DN405_20265 PF13404 AsnC-type helix-turn-helix domain DN405_20265 PF01037 Lrp/AsnC ligand binding domain DN405_20280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN405_20280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN405_20285 PF00202 Aminotransferase class-III DN405_20290 PF00696 Amino acid kinase family DN405_20295 PF01960 ArgJ family DN405_20300 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN405_20300 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN405_20310 PF00106 short chain dehydrogenase DN405_20315 PF00753 Metallo-beta-lactamase superfamily DN405_20320 PF03807 NADP oxidoreductase coenzyme F420-dependent DN405_20320 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN405_20325 PF03313 Serine dehydratase alpha chain DN405_20330 PF01842 ACT domain DN405_20330 PF03315 Serine dehydratase beta chain DN405_20340 PF00753 Metallo-beta-lactamase superfamily DN405_20340 PF12706 Beta-lactamase superfamily domain DN405_20355 PF00690 Cation transporter/ATPase, N-terminus DN405_20355 PF00689 Cation transporting ATPase, C-terminus DN405_20365 PF11799 impB/mucB/samB family C-terminal domain DN405_20365 PF00817 impB/mucB/samB family DN405_20365 PF11798 IMS family HHH motif DN405_20370 PF07687 Peptidase dimerisation domain DN405_20370 PF01546 Peptidase family M20/M25/M40 DN405_20375 PF13302 Acetyltransferase (GNAT) domain DN405_20385 PF03734 L,D-transpeptidase catalytic domain DN405_20390 PF11728 Putative aromatic acid exporter C-terminal domain DN405_20390 PF06081 Aromatic acid exporter family member 1 DN405_20395 PF00005 ABC transporter DN405_20400 PF00528 Binding-protein-dependent transport system inner membrane component DN405_20405 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN405_20410 PF06491 Disulphide isomerase DN405_20415 PF11208 Protein of unknown function (DUF2992) DN405_20420 PF09297 NADH pyrophosphatase zinc ribbon domain DN405_20420 PF00293 NUDIX domain DN405_20425 PF04239 Protein of unknown function (DUF421) DN405_20430 PF01098 Cell cycle protein DN405_20435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN405_20435 PF02817 e3 binding domain DN405_20435 PF00364 Biotin-requiring enzyme DN405_20440 PF02780 Transketolase, C-terminal domain DN405_20440 PF02779 Transketolase, pyrimidine binding domain DN405_20445 PF00676 Dehydrogenase E1 component DN405_20450 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_20450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN405_20455 PF00871 Acetokinase family DN405_20460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN405_20460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN405_20465 PF01515 Phosphate acetyl/butaryl transferase DN405_20475 PF00989 PAS fold DN405_20475 PF02954 Bacterial regulatory protein, Fis family DN405_20475 PF00158 Sigma-54 interaction domain DN405_20485 PF03009 Glycerophosphoryl diester phosphodiesterase family DN405_20490 PF14174 YycC-like protein DN405_20500 PF08769 Sporulation initiation factor Spo0A C terminal DN405_20500 PF00072 Response regulator receiver domain DN405_20510 PF05580 SpoIVB peptidase S55 DN405_20510 PF17820 PDZ domain DN405_20515 PF13476 AAA domain DN405_20520 PF01316 Arginine repressor, DNA binding domain DN405_20520 PF02863 Arginine repressor, C-terminal domain DN405_20525 PF01728 FtsJ-like methyltransferase DN405_20525 PF01479 S4 domain DN405_20530 PF02780 Transketolase, C-terminal domain DN405_20530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN405_20530 PF02779 Transketolase, pyrimidine binding domain DN405_20535 PF00348 Polyprenyl synthetase DN405_20540 PF02609 Exonuclease VII small subunit DN405_20545 PF13742 OB-fold nucleic acid binding domain DN405_20545 PF02601 Exonuclease VII, large subunit DN405_20550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN405_20550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN405_20555 PF01029 NusB family DN405_20560 PF03780 Asp23 family, cell envelope-related function DN405_20565 PF02785 Biotin carboxylase C-terminal domain DN405_20565 PF00289 Biotin carboxylase, N-terminal domain DN405_20565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN405_20570 PF00364 Biotin-requiring enzyme DN405_20580 PF12685 SpoIIIAH-like protein DN405_20590 PF09581 Stage III sporulation protein AF (Spore_III_AF) DN405_20595 PF09546 Stage III sporulation protein AE (spore_III_AE) DN405_20600 PF06686 Stage III sporulation protein AC/AD protein family DN405_20605 PF06686 Stage III sporulation protein AC/AD protein family DN405_20610 PF09548 Stage III sporulation protein AB (spore_III_AB) DN405_20635 PF01132 Elongation factor P (EF-P) OB domain DN405_20635 PF09285 Elongation factor P, C-terminal DN405_20635 PF08207 Elongation factor P (EF-P) KOW-like domain DN405_20640 PF01321 Creatinase/Prolidase N-terminal domain DN405_20640 PF00557 Metallopeptidase family M24 DN405_20645 PF01220 Dehydroquinase class II DN405_20650 PF11085 Conserved membrane protein YqhR DN405_20655 PF07136 Protein of unknown function (DUF1385) DN405_20665 PF13419 Haloacid dehalogenase-like hydrolase DN405_20670 PF02742 Iron dependent repressor, metal binding and dimerisation domain DN405_20670 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN405_20680 PF03551 Transcriptional regulator PadR-like family DN405_20695 PF03099 Biotin/lipoate A/B protein ligase family DN405_20700 PF00581 Rhodanese-like domain DN405_20710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN405_20710 PF00356 Bacterial regulatory proteins, lacI family DN405_20720 PF00893 Small Multidrug Resistance protein DN405_20725 PF00893 Small Multidrug Resistance protein DN405_20755 PF00005 ABC transporter DN405_20760 PF00392 Bacterial regulatory proteins, gntR family DN405_20775 PF02347 Glycine cleavage system P-protein DN405_20780 PF02347 Glycine cleavage system P-protein DN405_20785 PF02347 Glycine cleavage system P-protein DN405_20790 PF01571 Aminomethyltransferase folate-binding domain DN405_20790 PF08669 Glycine cleavage T-protein C-terminal barrel domain DN405_20795 PF00176 SNF2 family N-terminal domain DN405_20795 PF00271 Helicase conserved C-terminal domain DN405_20800 PF11079 Bacterial protein YqhG of unknown function DN405_20820 PF14038 YqzE-like protein DN405_20825 PF01202 Shikimate kinase DN405_20845 PF00271 Helicase conserved C-terminal domain DN405_20900 PF11117 Protein of unknown function (DUF2626) DN405_20905 PF00375 Sodium:dicarboxylate symporter family DN405_20940 PF04101 Glycosyltransferase family 28 C-terminal domain DN405_20940 PF03033 Glycosyltransferase family 28 N-terminal domain DN405_20945 PF02310 B12 binding domain DN405_20945 PF02607 B12 binding domain DN405_20945 PF00809 Pterin binding enzyme DN405_20945 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN405_20945 PF02574 Homocysteine S-methyltransferase DN405_20950 PF02574 Homocysteine S-methyltransferase DN405_20950 PF02219 Methylenetetrahydrofolate reductase DN405_20955 PF01053 Cys/Met metabolism PLP-dependent enzyme DN405_20960 PF01053 Cys/Met metabolism PLP-dependent enzyme DN405_20970 PF01022 Bacterial regulatory protein, arsR family DN405_20980 PF00753 Metallo-beta-lactamase superfamily DN405_20985 PF10958 Protein of unknown function (DUF2759) DN405_20990 PF00480 ROK family DN405_20995 PF06014 Bacterial protein of unknown function (DUF910) DN405_21000 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN405_21005 PF00471 Ribosomal protein L33 DN405_21010 PF00483 Nucleotidyl transferase DN405_21015 PF01895 PhoU domain DN405_21020 PF00005 ABC transporter DN405_21025 PF00528 Binding-protein-dependent transport system inner membrane component DN405_21030 PF00528 Binding-protein-dependent transport system inner membrane component DN405_21035 PF12849 PBP superfamily domain DN405_21045 PF07690 Major Facilitator Superfamily DN405_21050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN405_21050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN405_21060 PF06691 Protein of unknown function (DUF1189) DN405_21070 PF04551 GcpE protein DN405_21075 PF01475 Ferric uptake regulator family DN405_21080 PF00950 ABC 3 transport family DN405_21085 PF00005 ABC transporter DN405_21090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_21090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_21095 PF11116 Protein of unknown function (DUF2624) DN405_21100 PF01261 Xylose isomerase-like TIM barrel DN405_21105 PF00270 DEAD/DEAH box helicase DN405_21105 PF00271 Helicase conserved C-terminal domain DN405_21115 PF02401 LytB protein DN405_21120 PF01784 NIF3 (NGG1p interacting factor 3) DN405_21125 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DN405_21130 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN405_21135 PF04545 Sigma-70, region 4 DN405_21135 PF04542 Sigma-70 region 2 DN405_21135 PF00140 Sigma-70 factor, region 1.2 DN405_21135 PF03979 Sigma-70 factor, region 1.1 DN405_21135 PF04539 Sigma-70 region 3 DN405_21140 PF08275 DNA primase catalytic core, N-terminal domain DN405_21140 PF10410 DnaB-helicase binding domain of primase DN405_21140 PF01807 CHC2 zinc finger DN405_21145 PF03618 Kinase/pyrophosphorylase DN405_21150 PF08279 HTH domain DN405_21150 PF00571 CBS domain DN405_21155 PF02565 Recombination protein O C terminal DN405_21155 PF11967 Recombination protein O N terminal DN405_21165 PF07650 KH domain DN405_21165 PF01926 50S ribosome-binding GTPase DN405_21170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN405_21175 PF01219 Prokaryotic diacylglycerol kinase DN405_21180 PF02130 Uncharacterized protein family UPF0054 DN405_21185 PF07698 7TM receptor with intracellular HD hydrolase DN405_21185 PF01966 HD domain DN405_21185 PF07697 7TM-HD extracellular DN405_21190 PF02562 PhoH-like protein DN405_21195 PF06898 Putative stage IV sporulation protein YqfD DN405_21200 PF07873 YabP family DN405_21210 PF09424 Yqey-like protein DN405_21215 PF01165 Ribosomal protein S21 DN405_21225 PF00919 Uncharacterized protein family UPF0004 DN405_21225 PF04055 Radical SAM superfamily DN405_21225 PF01938 TRAM domain DN405_21230 PF04452 RNA methyltransferase DN405_21240 PF00226 DnaJ domain DN405_21240 PF01556 DnaJ C terminal domain DN405_21240 PF00684 DnaJ central domain DN405_21245 PF00012 Hsp70 protein DN405_21250 PF01025 GrpE DN405_21255 PF01628 HrcA protein C terminal domain DN405_21260 PF06969 HemN C-terminal domain DN405_21260 PF04055 Radical SAM superfamily DN405_21265 PF01638 HxlR-like helix-turn-helix DN405_21270 PF00009 Elongation factor Tu GTP binding domain DN405_21270 PF06421 GTP-binding protein LepA C-terminus DN405_21270 PF00679 Elongation factor G C-terminus DN405_21270 PF03144 Elongation factor Tu domain 2 DN405_21280 PF03418 Germination protease DN405_21285 PF01649 Ribosomal protein S20 DN405_21290 PF06144 DNA polymerase III, delta subunit DN405_21295 PF14141 YqzM-like protein DN405_21300 PF03772 Competence protein DN405_21300 PF13567 Domain of unknown function (DUF4131) DN405_21300 PF00753 Metallo-beta-lactamase superfamily DN405_21305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN405_21310 PF10531 SLBB domain DN405_21315 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN405_21315 PF03807 NADP oxidoreductase coenzyme F420-dependent DN405_21320 PF13649 Methyltransferase domain DN405_21330 PF01966 HD domain DN405_21335 PF01467 Cytidylyltransferase-like DN405_21340 PF01985 CRS1 / YhbY (CRM) domain DN405_21345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DN405_21345 PF01488 Shikimate / quinate 5-dehydrogenase DN405_21345 PF08501 Shikimate dehydrogenase substrate binding domain DN405_21350 PF01926 50S ribosome-binding GTPase DN405_21365 PF02666 Phosphatidylserine decarboxylase DN405_21370 PF04545 Sigma-70, region 4 DN405_21370 PF04542 Sigma-70 region 2 DN405_21385 PF00471 Ribosomal protein L33 DN405_21390 PF00881 Nitroreductase family DN405_21395 PF04607 Region found in RelA / SpoT proteins DN405_21405 PF00245 Alkaline phosphatase DN405_21410 PF00583 Acetyltransferase (GNAT) family DN405_21415 PF00561 alpha/beta hydrolase fold DN405_21415 PF08386 TAP-like protein DN405_21450 PF05922 Peptidase inhibitor I9 DN405_21450 PF02225 PA domain DN405_21450 PF00082 Subtilase family DN405_21450 PF13860 FlgD Ig-like domain DN405_21455 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DN405_21465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN405_21470 PF07681 DoxX DN405_21500 PF00005 ABC transporter DN405_21505 PF01032 FecCD transport family DN405_21510 PF01497 Periplasmic binding protein DN405_21520 PF14143 YrhC-like protein DN405_21525 PF00465 Iron-containing alcohol dehydrogenase DN405_21525 PF00171 Aldehyde dehydrogenase family DN405_21530 PF01053 Cys/Met metabolism PLP-dependent enzyme DN405_21535 PF00291 Pyridoxal-phosphate dependent enzyme DN405_21540 PF01048 Phosphorylase superfamily DN405_21545 PF08241 Methyltransferase domain DN405_21560 PF00905 Penicillin binding protein transpeptidase domain DN405_21560 PF03717 Penicillin-binding Protein dimerisation domain DN405_21570 PF01272 Transcription elongation factor, GreA/GreB, C-term DN405_21570 PF03449 Transcription elongation factor, N-terminal DN405_21575 PF00485 Phosphoribulokinase / Uridine kinase family DN405_21595 PF02618 YceG-like family DN405_21600 PF06949 Protein of unknown function (DUF1292) DN405_21605 PF03652 Holliday junction resolvase DN405_21610 PF06135 IreB regulatory phosphoprotein DN405_21615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN405_21615 PF02272 DHHA1 domain DN405_21615 PF01411 tRNA synthetases class II (A) DN405_21625 PF01594 AI-2E family transporter DN405_21645 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN405_21645 PF13538 UvrD-like helicase C-terminal domain DN405_21645 PF14490 Helix-hairpin-helix containing domain DN405_21660 PF00266 Aminotransferase class-V DN405_21665 PF02082 Transcriptional regulator DN405_21670 PF16193 AAA C-terminal domain DN405_21670 PF12002 MgsA AAA+ ATPase C terminal DN405_21670 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN405_21690 PF00899 ThiF family DN405_21695 PF00152 tRNA synthetases class II (D, K and N) DN405_21695 PF02938 GAD domain DN405_21695 PF01336 OB-fold nucleic acid binding domain DN405_21700 PF13393 Histidyl-tRNA synthetase DN405_21700 PF03129 Anticodon binding domain DN405_21705 PF02580 D-Tyr-tRNA(Tyr) deacylase DN405_21710 PF02824 TGS domain DN405_21710 PF04607 Region found in RelA / SpoT proteins DN405_21710 PF13291 ACT domain DN405_21715 PF00156 Phosphoribosyl transferase domain DN405_21720 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DN405_21720 PF01368 DHH family DN405_21720 PF17768 RecJ OB domain DN405_21720 PF02272 DHHA1 domain DN405_21725 PF01545 Cation efflux family DN405_21725 PF16916 Dimerisation domain of Zinc Transporter DN405_21730 PF07549 SecD/SecF GG Motif DN405_21730 PF02355 Protein export membrane protein DN405_21735 PF13797 Post-transcriptional regulator DN405_21740 PF01943 Polysaccharide biosynthesis protein DN405_21740 PF14667 Polysaccharide biosynthesis C-terminal domain DN405_21745 PF04239 Protein of unknown function (DUF421) DN405_21755 PF02699 Preprotein translocase subunit DN405_21760 PF01702 Queuine tRNA-ribosyltransferase DN405_21765 PF02547 Queuosine biosynthesis protein DN405_21770 PF11146 Protein of unknown function (DUF2905) DN405_21775 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN405_21775 PF05491 RuvB C-terminal winged helix domain DN405_21775 PF17864 RuvB AAA lid domain DN405_21780 PF01330 RuvA N terminal domain DN405_21780 PF07499 RuvA, C-terminal domain DN405_21785 PF01497 Periplasmic binding protein DN405_21805 PF01476 LysM domain DN405_21810 PF02445 Quinolinate synthetase A protein DN405_21815 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DN405_21815 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DN405_21820 PF00890 FAD binding domain DN405_21820 PF02910 Fumarate reductase flavoprotein C-term DN405_21825 PF00266 Aminotransferase class-V DN405_21830 PF02829 3H domain DN405_21830 PF08279 HTH domain DN405_21835 PF03473 MOSC domain DN405_21835 PF03475 3-alpha domain DN405_21840 PF00800 Prephenate dehydratase DN405_21840 PF01842 ACT domain DN405_21845 PF02687 FtsX-like permease family DN405_21850 PF02687 FtsX-like permease family DN405_21855 PF00005 ABC transporter DN405_21860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_21865 PF00072 Response regulator receiver domain DN405_21865 PF00486 Transcriptional regulatory protein, C terminal DN405_21870 PF01018 GTP1/OBG DN405_21870 PF01926 50S ribosome-binding GTPase DN405_21870 PF09269 Domain of unknown function (DUF1967) DN405_21875 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN405_21875 PF14682 Sporulation initiation phospho-transferase B, C-terminal DN405_21880 PF01016 Ribosomal L27 protein DN405_21885 PF04327 Cysteine protease Prp DN405_21890 PF00829 Ribosomal prokaryotic L21 protein DN405_21895 PF10150 Ribonuclease E/G family DN405_21895 PF00575 S1 RNA binding domain DN405_21900 PF02163 Peptidase family M50 DN405_21905 PF01551 Peptidase family M23 DN405_21910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN405_21915 PF03775 Septum formation inhibitor MinC, C-terminal domain DN405_21925 PF04085 rod shape-determining protein MreC DN405_21935 PF04002 RadC-like JAB domain DN405_21940 PF02545 Maf-like protein DN405_21950 PF08245 Mur ligase middle domain DN405_21950 PF02875 Mur ligase family, glutamate ligase domain DN405_21955 PF08264 Anticodon-binding domain of tRNA DN405_21955 PF10458 Valyl tRNA synthetase tRNA binding arm DN405_21955 PF00133 tRNA synthetases class I (I, L, M and V) DN405_21965 PF01476 LysM domain DN405_21970 PF00202 Aminotransferase class-III DN405_21975 PF00490 Delta-aminolevulinic acid dehydratase DN405_21980 PF02602 Uroporphyrinogen-III synthase HemD DN405_21985 PF03900 Porphobilinogen deaminase, C-terminal domain DN405_21985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DN405_21990 PF01578 Cytochrome C assembly protein DN405_21995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DN405_21995 PF01488 Shikimate / quinate 5-dehydrogenase DN405_21995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DN405_22000 PF01047 MarR family DN405_22005 PF02566 OsmC-like protein DN405_22010 PF01926 50S ribosome-binding GTPase DN405_22015 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN405_22015 PF05362 Lon protease (S16) C-terminal proteolytic domain DN405_22015 PF00004 ATPase family associated with various cellular activities (AAA) DN405_22020 PF00004 ATPase family associated with various cellular activities (AAA) DN405_22020 PF05362 Lon protease (S16) C-terminal proteolytic domain DN405_22025 PF10431 C-terminal, D2-small domain, of ClpB protein DN405_22025 PF07724 AAA domain (Cdc48 subfamily) DN405_22025 PF06689 ClpX C4-type zinc finger DN405_22030 PF05697 Bacterial trigger factor protein (TF) DN405_22030 PF05698 Bacterial trigger factor protein (TF) C-terminus DN405_22030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN405_22045 PF11724 YvbH-like oligomerisation region DN405_22045 PF08000 Bacterial PH domain DN405_22065 PF12850 Calcineurin-like phosphoesterase superfamily domain DN405_22070 PF01725 Ham1 family DN405_22075 PF03725 3' exoribonuclease family, domain 2 DN405_22075 PF01138 3' exoribonuclease family, domain 1 DN405_22080 PF10646 Sporulation and spore germination DN405_22085 PF01177 Asp/Glu/Hydantoin racemase DN405_22095 PF00196 Bacterial regulatory proteins, luxR family DN405_22100 PF00860 Permease family DN405_22105 PF07969 Amidohydrolase family DN405_22110 PF04024 PspC domain DN405_22115 PF07883 Cupin domain DN405_22115 PF01381 Helix-turn-helix DN405_22120 PF13536 Putative multidrug resistance efflux transporter DN405_22125 PF00230 Major intrinsic protein DN405_22130 PF02082 Transcriptional regulator DN405_22140 PF00005 ABC transporter DN405_22140 PF13732 Domain of unknown function (DUF4162) DN405_22145 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DN405_22150 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN405_22150 PF00691 OmpA family DN405_22155 PF01618 MotA/TolQ/ExbB proton channel family DN405_22165 PF02557 D-alanyl-D-alanine carboxypeptidase DN405_22170 PF03061 Thioesterase superfamily DN405_22175 PF13183 4Fe-4S dicluster domain DN405_22175 PF13085 2Fe-2S iron-sulfur cluster binding domain DN405_22180 PF00890 FAD binding domain DN405_22180 PF02910 Fumarate reductase flavoprotein C-term DN405_22185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DN405_22190 PF10702 Protein of unknown function (DUF2507) DN405_22195 PF08459 UvrC Helix-hairpin-helix N-terminal DN405_22195 PF02151 UvrB/uvrC motif DN405_22195 PF01541 GIY-YIG catalytic domain DN405_22200 PF00085 Thioredoxin DN405_22205 PF01012 Electron transfer flavoprotein domain DN405_22205 PF00766 Electron transfer flavoprotein FAD-binding domain DN405_22210 PF01012 Electron transfer flavoprotein domain DN405_22215 PF00378 Enoyl-CoA hydratase/isomerase DN405_22220 PF00440 Bacterial regulatory proteins, tetR family DN405_22220 PF08359 YsiA-like protein, C-terminal region DN405_22225 PF13193 AMP-binding enzyme C-terminal domain DN405_22225 PF00501 AMP-binding enzyme DN405_22235 PF01497 Periplasmic binding protein DN405_22240 PF01032 FecCD transport family DN405_22255 PF05163 DinB family DN405_22280 PF00005 ABC transporter DN405_22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_22285 PF00512 His Kinase A (phospho-acceptor) domain DN405_22290 PF00486 Transcriptional regulatory protein, C terminal DN405_22290 PF00072 Response regulator receiver domain DN405_22295 PF09962 Uncharacterized conserved protein (DUF2196) DN405_22300 PF10672 S-adenosylmethionine-dependent methyltransferase DN405_22300 PF17785 PUA-like domain DN405_22305 PF03992 Antibiotic biosynthesis monooxygenase DN405_22310 PF04203 Sortase domain DN405_22315 PF00005 ABC transporter DN405_22320 PF01032 FecCD transport family DN405_22325 PF01497 Periplasmic binding protein DN405_22330 PF05031 Iron Transport-associated domain DN405_22340 PF05031 Iron Transport-associated domain DN405_22345 PF05525 Branched-chain amino acid transport protein DN405_22350 PF00849 RNA pseudouridylate synthase DN405_22350 PF01479 S4 domain DN405_22355 PF01713 Smr domain DN405_22355 PF00488 MutS domain V DN405_22360 PF14716 Helix-hairpin-helix domain DN405_22360 PF14791 DNA polymerase beta thumb DN405_22360 PF02811 PHP domain DN405_22365 PF02674 Colicin V production protein DN405_22370 PF05164 Cell division protein ZapA DN405_22375 PF11858 Domain of unknown function (DUF3378) DN405_22375 PF01351 Ribonuclease HII DN405_22385 PF00106 short chain dehydrogenase DN405_22390 PF01336 OB-fold nucleic acid binding domain DN405_22390 PF00152 tRNA synthetases class II (D, K and N) DN405_22395 PF03484 tRNA synthetase B5 domain DN405_22395 PF03483 B3/4 domain DN405_22395 PF03147 Ferredoxin-fold anticodon binding domain DN405_22395 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN405_22395 PF01588 Putative tRNA binding domain DN405_22400 PF01409 tRNA synthetases class II core domain (F) DN405_22400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DN405_22405 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN405_22405 PF00588 SpoU rRNA Methylase family DN405_22410 PF14098 Small, acid-soluble spore protein I DN405_22415 PF01966 HD domain DN405_22425 PF07690 Major Facilitator Superfamily DN405_22435 PF16859 Tetracyclin repressor-like, C-terminal domain DN405_22435 PF00440 Bacterial regulatory proteins, tetR family DN405_22440 PF05343 M42 glutamyl aminopeptidase DN405_22450 PF00453 Ribosomal protein L20 DN405_22455 PF01632 Ribosomal protein L35 DN405_22460 PF00707 Translation initiation factor IF-3, C-terminal domain DN405_22460 PF05198 Translation initiation factor IF-3, N-terminal domain DN405_22465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN405_22465 PF02824 TGS domain DN405_22465 PF03129 Anticodon binding domain DN405_22465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN405_22470 PF08812 YtxC-like family DN405_22475 PF13783 Domain of unknown function (DUF4177) DN405_22480 PF07319 Primosomal protein DnaI N-terminus DN405_22480 PF01695 IstB-like ATP binding protein DN405_22485 PF07261 Replication initiation and membrane attachment DN405_22490 PF03477 ATP cone domain DN405_22495 PF02675 S-adenosylmethionine decarboxylase DN405_22500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN405_22500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN405_22505 PF01121 Dephospho-CoA kinase DN405_22510 PF02659 Putative manganese efflux pump DN405_22515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DN405_22515 PF06827 Zinc finger found in FPG and IleRS DN405_22515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DN405_22520 PF01367 5'-3' exonuclease, C-terminal SAM fold DN405_22520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN405_22520 PF00476 DNA polymerase family A DN405_22525 PF16736 Single Cache-like DN405_22525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_22525 PF00512 His Kinase A (phospho-acceptor) domain DN405_22525 PF00989 PAS fold DN405_22530 PF00486 Transcriptional regulatory protein, C terminal DN405_22530 PF00072 Response regulator receiver domain DN405_22545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN405_22545 PF00056 lactate/malate dehydrogenase, NAD binding domain DN405_22550 PF00180 Isocitrate/isopropylmalate dehydrogenase DN405_22555 PF00285 Citrate synthase, C-terminal domain DN405_22565 PF04284 Protein of unknown function (DUF441) DN405_22570 PF01594 AI-2E family transporter DN405_22575 PF04186 FxsA cytoplasmic membrane protein DN405_22580 PF02887 Pyruvate kinase, alpha/beta domain DN405_22580 PF00224 Pyruvate kinase, barrel domain DN405_22580 PF00391 PEP-utilising enzyme, mobile domain DN405_22585 PF00365 Phosphofructokinase DN405_22590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN405_22595 PF17848 Acetyl-coA carboxylase zinc finger domain DN405_22595 PF01039 Carboxyl transferase domain DN405_22600 PF00392 Bacterial regulatory proteins, gntR family DN405_22605 PF00390 Malic enzyme, N-terminal domain DN405_22605 PF03949 Malic enzyme, NAD binding domain DN405_22610 PF01336 OB-fold nucleic acid binding domain DN405_22610 PF02811 PHP domain DN405_22610 PF14579 Helix-hairpin-helix motif DN405_22610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN405_22610 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN405_22615 PF14034 Sporulation protein YtrH DN405_22625 PF01368 DHH family DN405_22625 PF02272 DHHA1 domain DN405_22630 PF14007 YtpI-like protein DN405_22640 PF00392 Bacterial regulatory proteins, gntR family DN405_22640 PF00571 CBS domain DN405_22640 PF03061 Thioesterase superfamily DN405_22640 PF07085 DRTGG domain DN405_22650 PF01321 Creatinase/Prolidase N-terminal domain DN405_22650 PF00557 Metallopeptidase family M24 DN405_22685 PF12746 GNAT acetyltransferase DN405_22690 PF07883 Cupin domain DN405_22700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN405_22700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN405_22710 PF00582 Universal stress protein family DN405_22730 PF00206 Lyase DN405_22730 PF14698 Argininosuccinate lyase C-terminal DN405_22735 PF00764 Arginosuccinate synthase DN405_22750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_22750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_22755 PF12787 EcsC protein family DN405_22770 PF00871 Acetokinase family DN405_22775 PF02384 N-6 DNA Methylase DN405_22780 PF08534 Redoxin DN405_22785 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN405_22795 PF01513 ATP-NAD kinase DN405_22800 PF07969 Amidohydrolase family DN405_22810 PF13193 AMP-binding enzyme C-terminal domain DN405_22810 PF00501 AMP-binding enzyme DN405_22815 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN405_22820 PF02568 Thiamine biosynthesis protein (ThiI) DN405_22820 PF02926 THUMP domain DN405_22825 PF00266 Aminotransferase class-V DN405_22830 PF06160 Septation ring formation regulator, EzrA DN405_22835 PF03466 LysR substrate binding domain DN405_22835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_22840 PF00892 EamA-like transporter family DN405_22845 PF00440 Bacterial regulatory proteins, tetR family DN405_22850 PF13185 GAF domain DN405_22855 PF01053 Cys/Met metabolism PLP-dependent enzyme DN405_22860 PF01479 S4 domain DN405_22860 PF00163 Ribosomal protein S4/S9 N-terminal domain DN405_22880 PF00579 tRNA synthetases class I (W and Y) DN405_22880 PF01479 S4 domain DN405_22885 PF14602 Hexapeptide repeat of succinyl-transferase DN405_22885 PF12464 Maltose acetyltransferase DN405_22890 PF00501 AMP-binding enzyme DN405_22890 PF13193 AMP-binding enzyme C-terminal domain DN405_22895 PF00583 Acetyltransferase (GNAT) family DN405_22900 PF00571 CBS domain DN405_22905 PF00850 Histone deacetylase domain DN405_22920 PF00486 Transcriptional regulatory protein, C terminal DN405_22920 PF00072 Response regulator receiver domain DN405_22925 PF00672 HAMP domain DN405_22925 PF00512 His Kinase A (phospho-acceptor) domain DN405_22925 PF13426 PAS domain DN405_22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_22930 PF12796 Ankyrin repeats (3 copies) DN405_22935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN405_22940 PF01741 Large-conductance mechanosensitive channel, MscL DN405_22965 PF00356 Bacterial regulatory proteins, lacI family DN405_22970 PF00793 DAHP synthetase I family DN405_22970 PF01817 Chorismate mutase type II DN405_22975 PF07537 CamS sex pheromone cAM373 precursor DN405_22980 PF11009 Protein of unknown function (DUF2847) DN405_22990 PF02073 Thermophilic metalloprotease (M29) DN405_23005 PF13302 Acetyltransferase (GNAT) domain DN405_23010 PF08245 Mur ligase middle domain DN405_23010 PF02875 Mur ligase family, glutamate ligase domain DN405_23010 PF01225 Mur ligase family, catalytic domain DN405_23020 PF09397 Ftsk gamma domain DN405_23020 PF17854 FtsK alpha domain DN405_23020 PF01580 FtsK/SpoIIIE family DN405_23025 PF01520 N-acetylmuramoyl-L-alanine amidase DN405_23025 PF01476 LysM domain DN405_23035 PF14794 Domain of unknown function (DUF4479) DN405_23035 PF01588 Putative tRNA binding domain DN405_23040 PF07285 Protein of unknown function (DUF1444) DN405_23045 PF00085 Thioredoxin DN405_23050 PF01931 Protein of unknown function DUF84 DN405_23055 PF05343 M42 glutamyl aminopeptidase DN405_23065 PF00753 Metallo-beta-lactamase superfamily DN405_23070 PF02390 Putative methyltransferase DN405_23075 PF14165 YtzH-like protein DN405_23080 PF01636 Phosphotransferase enzyme family DN405_23085 PF17999 Pullulanase N1-terminal domain DN405_23085 PF00128 Alpha amylase, catalytic domain DN405_23085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN405_23090 PF02834 LigT like Phosphoesterase DN405_23095 PF01546 Peptidase family M20/M25/M40 DN405_23100 PF08220 DeoR-like helix-turn-helix domain DN405_23105 PF01479 S4 domain DN405_23105 PF00849 RNA pseudouridylate synthase DN405_23110 PF14667 Polysaccharide biosynthesis C-terminal domain DN405_23110 PF01943 Polysaccharide biosynthesis protein DN405_23120 PF07690 Major Facilitator Superfamily DN405_23125 PF01022 Bacterial regulatory protein, arsR family DN405_23130 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DN405_23145 PF10957 Sporulation protein Cse60 DN405_23155 PF02559 CarD-like/TRCF domain DN405_23165 PF06800 Sugar transport protein DN405_23180 PF02391 MoaE protein DN405_23185 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DN405_23190 PF00994 Probable molybdopterin binding domain DN405_23190 PF03454 MoeA C-terminal region (domain IV) DN405_23190 PF03453 MoeA N-terminal region (domain I and II) DN405_23195 PF01967 MoaC family DN405_23200 PF00899 ThiF family DN405_23205 PF04055 Radical SAM superfamily DN405_23205 PF06463 Molybdenum Cofactor Synthesis C DN405_23230 PF00581 Rhodanese-like domain DN405_23240 PF00561 alpha/beta hydrolase fold DN405_23245 PF03323 Bacillus/Clostridium GerA spore germination protein DN405_23250 PF03845 Spore germination protein DN405_23275 PF08264 Anticodon-binding domain of tRNA DN405_23275 PF00133 tRNA synthetases class I (I, L, M and V) DN405_23275 PF13603 Leucyl-tRNA synthetase, Domain 2 DN405_23275 PF09334 tRNA synthetases class I (M) DN405_23280 PF07690 Major Facilitator Superfamily DN405_23285 PF00999 Sodium/hydrogen exchanger family DN405_23290 PF02080 TrkA-C domain DN405_23295 PF00589 Phage integrase family DN405_23305 PF00005 ABC transporter DN405_23310 PF04235 Protein of unknown function (DUF418) DN405_23310 PF07786 Protein of unknown function (DUF1624) DN405_23320 PF10732 Protein of unknown function (DUF2524) DN405_23325 PF16199 Radical_SAM C-terminal domain DN405_23325 PF04055 Radical SAM superfamily DN405_23330 PF06962 Putative rRNA methylase DN405_23350 PF10776 Protein of unknown function (DUF2600) DN405_23355 PF12146 Serine aminopeptidase, S33 DN405_23360 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_23365 PF01569 PAP2 superfamily DN405_23370 PF13439 Glycosyltransferase Family 4 DN405_23370 PF00534 Glycosyl transferases group 1 DN405_23375 PF12804 MobA-like NTP transferase domain DN405_23380 PF00994 Probable molybdopterin binding domain DN405_23390 PF13302 Acetyltransferase (GNAT) domain DN405_23395 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN405_23395 PF02772 S-adenosylmethionine synthetase, central domain DN405_23395 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN405_23400 PF01293 Phosphoenolpyruvate carboxykinase DN405_23465 PF13426 PAS domain DN405_23465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_23465 PF00512 His Kinase A (phospho-acceptor) domain DN405_23465 PF00989 PAS fold DN405_23465 PF13188 PAS domain DN405_23470 PF02743 Cache domain DN405_23470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_23470 PF00512 His Kinase A (phospho-acceptor) domain DN405_23485 PF00561 alpha/beta hydrolase fold DN405_23485 PF08386 TAP-like protein DN405_23490 PF00884 Sulfatase DN405_23510 PF00005 ABC transporter DN405_23515 PF00528 Binding-protein-dependent transport system inner membrane component DN405_23530 PF13419 Haloacid dehalogenase-like hydrolase DN405_23540 PF00293 NUDIX domain DN405_23575 PF02664 S-Ribosylhomocysteinase (LuxS) DN405_23580 PF01809 Putative membrane protein insertion efficiency factor DN405_23585 PF00484 Carbonic anhydrase DN405_23590 PF01654 Cytochrome bd terminal oxidase subunit I DN405_23595 PF02322 Cytochrome bd terminal oxidase subunit II DN405_23600 PF10676 Spore germination protein gerPA/gerPF DN405_23610 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_23610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_23635 PF04012 PspA/IM30 family DN405_23650 PF07664 Ferrous iron transport protein B C terminus DN405_23650 PF07670 Nucleoside recognition DN405_23650 PF02421 Ferrous iron transport protein B DN405_23650 PF17910 FeoB cytosolic helical domain DN405_23660 PF09515 Thiamine transporter protein (Thia_YuaJ) DN405_23665 PF00512 His Kinase A (phospho-acceptor) domain DN405_23665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_23665 PF00672 HAMP domain DN405_23670 PF00486 Transcriptional regulatory protein, C terminal DN405_23670 PF00072 Response regulator receiver domain DN405_23700 PF00781 Diacylglycerol kinase catalytic domain DN405_23750 PF00248 Aldo/keto reductase family DN405_23765 PF09335 SNARE associated Golgi protein DN405_23770 PF00398 Ribosomal RNA adenine dimethylase DN405_23775 PF02687 FtsX-like permease family DN405_23780 PF00005 ABC transporter DN405_23785 PF06445 GyrI-like small molecule binding domain DN405_23785 PF12833 Helix-turn-helix domain DN405_23795 PF13630 SdpI/YhfL protein family DN405_23795 PF07853 Protein of unknown function (DUF1648) DN405_23800 PF01022 Bacterial regulatory protein, arsR family DN405_23805 PF00486 Transcriptional regulatory protein, C terminal DN405_23805 PF00072 Response regulator receiver domain DN405_23810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_23815 PF02687 FtsX-like permease family DN405_23820 PF02687 FtsX-like permease family DN405_23825 PF00005 ABC transporter DN405_23830 PF02687 FtsX-like permease family DN405_23840 PF13977 BetI-type transcriptional repressor, C-terminal DN405_23840 PF00440 Bacterial regulatory proteins, tetR family DN405_23850 PF02447 GntP family permease DN405_23865 PF07071 KDGP aldolase DN405_23870 PF03841 L-seryl-tRNA selenium transferase DN405_23875 PF01979 Amidohydrolase family DN405_23880 PF02557 D-alanyl-D-alanine carboxypeptidase DN405_23885 PF00512 His Kinase A (phospho-acceptor) domain DN405_23885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_23890 PF00486 Transcriptional regulatory protein, C terminal DN405_23890 PF00072 Response regulator receiver domain DN405_23895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN405_23895 PF13378 Enolase C-terminal domain-like DN405_23900 PF00501 AMP-binding enzyme DN405_23900 PF13193 AMP-binding enzyme C-terminal domain DN405_23905 PF00378 Enoyl-CoA hydratase/isomerase DN405_23910 PF00561 alpha/beta hydrolase fold DN405_23915 PF16582 Middle domain of thiamine pyrophosphate DN405_23915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN405_23915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN405_23920 PF00425 chorismate binding enzyme DN405_23925 PF01040 UbiA prenyltransferase family DN405_23930 PF01258 Prokaryotic dksA/traR C4-type zinc finger DN405_23935 PF00313 'Cold-shock' DNA-binding domain DN405_23950 PF00343 Carbohydrate phosphorylase DN405_23955 PF08323 Starch synthase catalytic domain DN405_23955 PF00534 Glycosyl transferases group 1 DN405_23960 PF00483 Nucleotidyl transferase DN405_23965 PF00483 Nucleotidyl transferase DN405_23970 PF00128 Alpha amylase, catalytic domain DN405_23970 PF02806 Alpha amylase, C-terminal all-beta domain DN405_23970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN405_23980 PF02225 PA domain DN405_23980 PF05922 Peptidase inhibitor I9 DN405_23980 PF13860 FlgD Ig-like domain DN405_23980 PF00082 Subtilase family DN405_23990 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN405_23990 PF00056 lactate/malate dehydrogenase, NAD binding domain DN405_23995 PF00440 Bacterial regulatory proteins, tetR family DN405_24095 PF05698 Bacterial trigger factor protein (TF) C-terminus DN405_24095 PF05697 Bacterial trigger factor protein (TF) DN405_24130 PF02308 MgtC family DN405_24135 PF07885 Ion channel DN405_24135 PF02254 TrkA-N domain DN405_24140 PF08868 YugN-like family DN405_24145 PF00342 Phosphoglucose isomerase DN405_24155 PF04070 Domain of unknown function (DUF378) DN405_24160 PF00575 S1 RNA binding domain DN405_24165 PF00155 Aminotransferase class I and II DN405_24170 PF01037 Lrp/AsnC ligand binding domain DN405_24175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN405_24175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN405_24180 PF08386 TAP-like protein DN405_24180 PF00561 alpha/beta hydrolase fold DN405_24190 PF00155 Aminotransferase class I and II DN405_24200 PF08810 Kinase associated protein B DN405_24205 PF00929 Exonuclease DN405_24210 PF03600 Citrate transporter DN405_24225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN405_24225 PF03129 Anticodon binding domain DN405_24230 PF03061 Thioesterase superfamily DN405_24240 PF02632 BioY family DN405_24245 PF00483 Nucleotidyl transferase DN405_24250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN405_24250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN405_24250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN405_24250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN405_24255 PF10372 Bacterial membrane-spanning protein N-terminus DN405_24255 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN405_24270 PF00892 EamA-like transporter family DN405_24275 PF01040 UbiA prenyltransferase family DN405_24280 PF02789 Cytosol aminopeptidase family, N-terminal domain DN405_24280 PF00883 Cytosol aminopeptidase family, catalytic domain DN405_24285 PF06725 3D domain DN405_24295 PF13344 Haloacid dehalogenase-like hydrolase DN405_24295 PF00293 NUDIX domain DN405_24300 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_24305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_24315 PF06445 GyrI-like small molecule binding domain DN405_24330 PF04463 Protein of unknown function (DUF523) DN405_24350 PF01521 Iron-sulphur cluster biosynthesis DN405_24355 PF01678 Diaminopimelate epimerase DN405_24360 PF07293 Protein of unknown function (DUF1450) DN405_24365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_24375 PF00005 ABC transporter DN405_24375 PF00664 ABC transporter transmembrane region DN405_24375 PF03412 Peptidase C39 family DN405_24380 PF03649 Uncharacterised protein family (UPF0014) DN405_24385 PF03831 PhnA domain DN405_24385 PF08274 PhnA Zinc-Ribbon DN405_24435 PF07315 Protein of unknown function (DUF1462) DN405_24440 PF01106 NifU-like domain DN405_24455 PF04608 Phosphatidylglycerophosphatase A DN405_24475 PF15608 PELOTA RNA binding domain DN405_24475 PF11202 Phosphoribosyl transferase (PRTase) DN405_24490 PF02525 Flavodoxin-like fold DN405_24495 PF13344 Haloacid dehalogenase-like hydrolase DN405_24505 PF01934 Protein of unknown function DUF86 DN405_24510 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN405_24535 PF06265 Protein of unknown function (DUF1027) DN405_24540 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN405_24545 PF07739 TipAS antibiotic-recognition domain DN405_24545 PF13411 MerR HTH family regulatory protein DN405_24550 PF10086 YhfC intramembrane metalloprotease DN405_24570 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DN405_24570 PF04055 Radical SAM superfamily DN405_24575 PF01551 Peptidase family M23 DN405_24580 PF09560 Sporulation protein YunB (Spo_YunB) DN405_24585 PF08827 Domain of unknown function (DUF1805) DN405_24590 PF02872 5'-nucleotidase, C-terminal domain DN405_24600 PF01458 Uncharacterized protein family (UPF0051) DN405_24605 PF01592 NifU-like N terminal domain DN405_24610 PF00266 Aminotransferase class-V DN405_24615 PF01458 Uncharacterized protein family (UPF0051) DN405_24620 PF00005 ABC transporter DN405_24625 PF03180 NLPA lipoprotein DN405_24630 PF03180 NLPA lipoprotein DN405_24635 PF00528 Binding-protein-dependent transport system inner membrane component DN405_24640 PF09383 NIL domain DN405_24640 PF00005 ABC transporter DN405_24650 PF00085 Thioredoxin DN405_24655 PF01751 Toprim domain DN405_24660 PF01597 Glycine cleavage H-protein DN405_24665 PF03960 ArsC family DN405_24685 PF00056 lactate/malate dehydrogenase, NAD binding domain DN405_24685 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN405_24705 PF13305 Tetracyclin repressor-like, C-terminal domain DN405_24705 PF00440 Bacterial regulatory proteins, tetR family DN405_24710 PF00753 Metallo-beta-lactamase superfamily DN405_24715 PF02770 Acyl-CoA dehydrogenase, middle domain DN405_24715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN405_24715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN405_24720 PF02803 Thiolase, C-terminal domain DN405_24720 PF00108 Thiolase, N-terminal domain DN405_24725 PF00378 Enoyl-CoA hydratase/isomerase DN405_24725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN405_24725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN405_24730 PF14115 YuzL-like protein DN405_24735 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_24735 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_24740 PF01619 Proline dehydrogenase DN405_24745 PF10835 Protein of unknown function (DUF2573) DN405_24750 PF01910 Thiamine-binding protein DN405_24755 PF00672 HAMP domain DN405_24755 PF02743 Cache domain DN405_24755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_24765 PF07690 Major Facilitator Superfamily DN405_24770 PF13520 Amino acid permease DN405_24785 PF02096 60Kd inner membrane protein DN405_24795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN405_24795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN405_24835 PF09335 SNARE associated Golgi protein DN405_24845 PF03734 L,D-transpeptidase catalytic domain DN405_24845 PF17969 L,D-transpeptidase C-terminal domain DN405_24850 PF00072 Response regulator receiver domain DN405_24850 PF00486 Transcriptional regulatory protein, C terminal DN405_24855 PF00989 PAS fold DN405_24855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_24855 PF16736 Single Cache-like DN405_24855 PF00512 His Kinase A (phospho-acceptor) domain DN405_24870 PF09334 tRNA synthetases class I (M) DN405_24870 PF08264 Anticodon-binding domain of tRNA DN405_24880 PF00672 HAMP domain DN405_24880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_24880 PF02743 Cache domain DN405_24885 PF00672 HAMP domain DN405_24885 PF02743 Cache domain DN405_24885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_24890 PF01883 Iron-sulfur cluster assembly protein DN405_24895 PF03413 Peptidase propeptide and YPEB domain DN405_24895 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN405_24895 PF01447 Thermolysin metallopeptidase, catalytic domain DN405_24895 PF07504 Fungalysin/Thermolysin Propeptide Motif DN405_24900 PF17954 Quercetinase C-terminal cupin domain DN405_24900 PF02678 Pirin DN405_24905 PF01047 MarR family DN405_24915 PF09335 SNARE associated Golgi protein DN405_24920 PF00999 Sodium/hydrogen exchanger family DN405_24925 PF02080 TrkA-C domain DN405_24930 PF01235 Sodium:alanine symporter family DN405_24935 PF00210 Ferritin-like domain DN405_24960 PF03641 Possible lysine decarboxylase DN405_24970 PF00210 Ferritin-like domain DN405_24980 PF01773 Na+ dependent nucleoside transporter N-terminus DN405_24980 PF07662 Na+ dependent nucleoside transporter C-terminus DN405_24985 PF07662 Na+ dependent nucleoside transporter C-terminus DN405_24985 PF01773 Na+ dependent nucleoside transporter N-terminus DN405_24990 PF01235 Sodium:alanine symporter family DN405_24995 PF01235 Sodium:alanine symporter family DN405_25000 PF13460 NAD(P)H-binding DN405_25015 PF00248 Aldo/keto reductase family DN405_25020 PF07690 Major Facilitator Superfamily DN405_25025 PF01638 HxlR-like helix-turn-helix DN405_25030 PF07849 Protein of unknown function (DUF1641) DN405_25035 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_25040 PF01479 S4 domain DN405_25040 PF00579 tRNA synthetases class I (W and Y) DN405_25045 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN405_25045 PF01565 FAD binding domain DN405_25055 PF00672 HAMP domain DN405_25055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_25055 PF17202 Single cache domain 3 DN405_25065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN405_25070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN405_25085 PF13302 Acetyltransferase (GNAT) domain DN405_25090 PF06146 Phosphate-starvation-inducible E DN405_25115 PF17440 Thiol-activated cytolysin beta sandwich domain DN405_25115 PF01289 Thiol-activated cytolysin DN405_25120 PF00005 ABC transporter DN405_25125 PF01032 FecCD transport family DN405_25130 PF01032 FecCD transport family DN405_25140 PF00072 Response regulator receiver domain DN405_25140 PF00486 Transcriptional regulatory protein, C terminal DN405_25175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_25180 PF00072 Response regulator receiver domain DN405_25180 PF00486 Transcriptional regulatory protein, C terminal DN405_25185 PF00005 ABC transporter DN405_25200 PF07786 Protein of unknown function (DUF1624) DN405_25200 PF04235 Protein of unknown function (DUF418) DN405_25205 PF00005 ABC transporter DN405_25235 PF01668 SmpB protein DN405_25240 PF08206 Ribonuclease B OB domain DN405_25240 PF17876 Cold shock domain DN405_25240 PF00773 RNB domain DN405_25240 PF00575 S1 RNA binding domain DN405_25245 PF12146 Serine aminopeptidase, S33 DN405_25250 PF03840 Preprotein translocase SecG subunit DN405_25255 PF04172 LrgB-like family DN405_25260 PF03788 LrgA family DN405_25265 PF01156 Inosine-uridine preferring nucleoside hydrolase DN405_25270 PF03952 Enolase, N-terminal domain DN405_25270 PF00113 Enolase, C-terminal TIM barrel domain DN405_25275 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN405_25275 PF01676 Metalloenzyme superfamily DN405_25280 PF00121 Triosephosphate isomerase DN405_25285 PF00162 Phosphoglycerate kinase DN405_25290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN405_25290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN405_25295 PF04198 Putative sugar-binding domain DN405_25305 PF04552 Sigma-54, DNA binding domain DN405_25305 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN405_25305 PF04963 Sigma-54 factor, core binding domain DN405_25325 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN405_25330 PF07451 Stage V sporulation protein AD (SpoVAD) DN405_25335 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN405_25345 PF04239 Protein of unknown function (DUF421) DN405_25350 PF00574 Clp protease DN405_25355 PF00381 PTS HPr component phosphorylation site DN405_25360 PF14527 WhiA LAGLIDADG-like domain DN405_25360 PF02650 WhiA C-terminal HTH domain DN405_25360 PF10298 WhiA N-terminal LAGLIDADG-like domain DN405_25365 PF01933 Uncharacterised protein family UPF0052 DN405_25370 PF03668 P-loop ATPase protein family DN405_25375 PF00293 NUDIX domain DN405_25385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN405_25395 PF14602 Hexapeptide repeat of succinyl-transferase DN405_25400 PF13419 Haloacid dehalogenase-like hydrolase DN405_25405 PF01790 Prolipoprotein diacylglyceryl transferase DN405_25410 PF02603 HPr Serine kinase N terminus DN405_25410 PF07475 HPr Serine kinase C-terminal domain DN405_25415 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DN405_25425 PF17760 UvrA interaction domain DN405_25425 PF00005 ABC transporter DN405_25425 PF17755 UvrA DNA-binding domain DN405_25430 PF17757 UvrB interaction domain DN405_25430 PF12344 Ultra-violet resistance protein B DN405_25430 PF00271 Helicase conserved C-terminal domain DN405_25430 PF02151 UvrB/uvrC motif DN405_25430 PF04851 Type III restriction enzyme, res subunit DN405_25445 PF13411 MerR HTH family regulatory protein DN405_25445 PF07739 TipAS antibiotic-recognition domain DN405_25460 PF03601 Conserved hypothetical protein 698 DN405_25465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_25465 PF03466 LysR substrate binding domain DN405_25470 PF00376 MerR family regulatory protein DN405_25470 PF09278 MerR, DNA binding DN405_25475 PF03358 NADPH-dependent FMN reductase DN405_25485 PF01906 Putative heavy-metal-binding DN405_25490 PF00005 ABC transporter DN405_25490 PF00664 ABC transporter transmembrane region DN405_25495 PF17820 PDZ domain DN405_25500 PF01471 Putative peptidoglycan binding domain DN405_25500 PF03572 Peptidase family S41 DN405_25500 PF17820 PDZ domain DN405_25505 PF02687 FtsX-like permease family DN405_25505 PF18075 FtsX extracellular domain DN405_25510 PF00005 ABC transporter DN405_25520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN405_25530 PF07517 SecA DEAD-like domain DN405_25530 PF02810 SEC-C motif DN405_25530 PF01043 SecA preprotein cross-linking domain DN405_25530 PF07516 SecA Wing and Scaffold domain DN405_25535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN405_25535 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DN405_25540 PF00313 'Cold-shock' DNA-binding domain DN405_25550 PF04851 Type III restriction enzyme, res subunit DN405_25550 PF00271 Helicase conserved C-terminal domain DN405_25555 PF01476 LysM domain DN405_25555 PF00877 NlpC/P60 family DN405_25560 PF01638 HxlR-like helix-turn-helix DN405_25565 PF02645 Uncharacterised protein, DegV family COG1307 DN405_25570 PF01205 Uncharacterized protein family UPF0029 DN405_25570 PF09186 Domain of unknown function (DUF1949) DN405_25575 PF03816 Cell envelope-related transcriptional attenuator domain DN405_25580 PF02350 UDP-N-acetylglucosamine 2-epimerase DN405_25585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN405_25585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN405_25585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN405_25590 PF00953 Glycosyl transferase family 4 DN405_25600 PF00874 PRD domain DN405_25600 PF00158 Sigma-54 interaction domain DN405_25600 PF03610 PTS system fructose IIA component DN405_25610 PF02417 Chromate transporter DN405_25615 PF04794 YdjC-like protein DN405_25620 PF11975 Family 4 glycosyl hydrolase C-terminal domain DN405_25620 PF02056 Family 4 glycosyl hydrolase DN405_25625 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN405_25630 PF02378 Phosphotransferase system, EIIC DN405_25635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN405_25645 PF02675 S-adenosylmethionine decarboxylase DN405_25650 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN405_25655 PF02378 Phosphotransferase system, EIIC DN405_25660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN405_25665 PF00375 Sodium:dicarboxylate symporter family DN405_25685 PF03466 LysR substrate binding domain DN405_25685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN405_25695 PF01654 Cytochrome bd terminal oxidase subunit I DN405_25700 PF02322 Cytochrome bd terminal oxidase subunit II DN405_25705 PF02040 Arsenical pump membrane protein DN405_25710 PF01964 Radical SAM ThiC family DN405_25710 PF13667 ThiC-associated domain DN405_25735 PF02652 L-lactate permease DN405_25745 PF09988 Uncharacterized metal-binding protein (DUF2227) DN405_25760 PF00884 Sulfatase DN405_25765 PF01063 Amino-transferase class IV DN405_25770 PF00877 NlpC/P60 family DN405_25770 PF01476 LysM domain DN405_25775 PF01773 Na+ dependent nucleoside transporter N-terminus DN405_25775 PF07662 Na+ dependent nucleoside transporter C-terminus DN405_25790 PF02028 BCCT, betaine/carnitine/choline family transporter DN405_25800 PF06725 3D domain DN405_25800 PF01476 LysM domain DN405_25830 PF04434 SWIM zinc finger DN405_25835 PF12419 SNF2 Helicase protein DN405_25835 PF00271 Helicase conserved C-terminal domain DN405_25835 PF00176 SNF2 family N-terminal domain DN405_25865 PF04542 Sigma-70 region 2 DN405_25865 PF04545 Sigma-70, region 4 DN405_25875 PF02687 FtsX-like permease family DN405_25875 PF12704 MacB-like periplasmic core domain DN405_25880 PF00005 ABC transporter DN405_25900 PF07690 Major Facilitator Superfamily DN405_25915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_25915 PF00512 His Kinase A (phospho-acceptor) domain DN405_25915 PF00989 PAS fold DN405_25915 PF16736 Single Cache-like DN405_25920 PF00072 Response regulator receiver domain DN405_25920 PF00486 Transcriptional regulatory protein, C terminal DN405_25935 PF01370 NAD dependent epimerase/dehydratase family DN405_25940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN405_25940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN405_25940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN405_25945 PF00535 Glycosyl transferase family 2 DN405_25965 PF13439 Glycosyltransferase Family 4 DN405_25970 PF13439 Glycosyltransferase Family 4 DN405_25970 PF00534 Glycosyl transferases group 1 DN405_25975 PF02350 UDP-N-acetylglucosamine 2-epimerase DN405_25980 PF01370 NAD dependent epimerase/dehydratase family DN405_25985 PF08485 Polysaccharide biosynthesis protein C-terminal DN405_25985 PF02719 Polysaccharide biosynthesis protein DN405_25990 PF13579 Glycosyl transferase 4-like domain DN405_25995 PF00132 Bacterial transferase hexapeptide (six repeats) DN405_26000 PF02397 Bacterial sugar transferase DN405_26005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN405_26010 PF02719 Polysaccharide biosynthesis protein DN405_26015 PF00483 Nucleotidyl transferase DN405_26025 PF13614 AAA domain DN405_26030 PF13807 G-rich domain on putative tyrosine kinase DN405_26030 PF02706 Chain length determinant protein DN405_26035 PF13614 AAA domain DN405_26040 PF07977 FabA-like domain DN405_26050 PF12116 Stage III sporulation protein D DN405_26060 PF01551 Peptidase family M23 DN405_26070 PF00005 ABC transporter DN405_26075 PF00072 Response regulator receiver domain DN405_26075 PF04397 LytTr DNA-binding domain DN405_26080 PF08486 Stage II sporulation protein DN405_26085 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN405_26095 PF06612 Protein of unknown function (DUF1146) DN405_26100 PF00361 Proton-conducting membrane transporter DN405_26105 PF00361 Proton-conducting membrane transporter DN405_26110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN405_26110 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DN405_26110 PF00361 Proton-conducting membrane transporter DN405_26115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DN405_26120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DN405_26130 PF00146 NADH dehydrogenase DN405_26135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DN405_26140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DN405_26145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DN405_26150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DN405_26155 PF03707 Bacterial signalling protein N terminal repeat DN405_26155 PF00563 EAL domain DN405_26155 PF00990 Diguanylate cyclase, GGDEF domain DN405_26170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DN405_26170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DN405_26175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN405_26175 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN405_26180 PF00231 ATP synthase DN405_26185 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN405_26185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN405_26185 PF00306 ATP synthase alpha/beta chain, C terminal domain DN405_26190 PF00213 ATP synthase delta (OSCP) subunit DN405_26195 PF00430 ATP synthase B/B' CF(0) DN405_26200 PF00137 ATP synthase subunit C DN405_26205 PF00119 ATP synthase A chain DN405_26210 PF03899 ATP synthase I chain DN405_26230 PF00464 Serine hydroxymethyltransferase DN405_26235 PF04260 Protein of unknown function (DUF436) DN405_26240 PF02502 Ribose/Galactose Isomerase DN405_26245 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN405_26250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN405_26255 PF07681 DoxX DN405_26260 PF01613 Flavin reductase like domain DN405_26270 PF02659 Putative manganese efflux pump DN405_26275 PF03481 Putative GTP-binding controlling metal-binding DN405_26275 PF01300 Telomere recombination DN405_26285 PF09551 Stage II sporulation protein R (spore_II_R) DN405_26290 PF17827 PrmC N-terminal domain DN405_26290 PF13847 Methyltransferase domain DN405_26295 PF03462 PCRF domain DN405_26295 PF00472 RF-1 domain DN405_26300 PF00265 Thymidine kinase DN405_26305 PF01197 Ribosomal protein L31 DN405_26315 PF07498 Rho termination factor, N-terminal domain DN405_26315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN405_26315 PF07497 Rho termination factor, RNA-binding domain DN405_26320 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN405_26325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN405_26330 PF01116 Fructose-bisphosphate aldolase class-II DN405_26335 PF00072 Response regulator receiver domain DN405_26340 PF10740 Domain of unknown function (DUF2529) DN405_26345 PF06418 CTP synthase N-terminus DN405_26345 PF00117 Glutamine amidotransferase class-I DN405_26350 PF05066 HB1, ASXL, restriction endonuclease HTH domain DN405_26360 PF02770 Acyl-CoA dehydrogenase, middle domain DN405_26360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN405_26360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN405_26365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN405_26365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN405_26365 PF02770 Acyl-CoA dehydrogenase, middle domain DN405_26370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN405_26370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN405_26375 PF00108 Thiolase, N-terminal domain DN405_26375 PF02803 Thiolase, C-terminal domain DN405_26380 PF02754 Cysteine-rich domain DN405_26380 PF13183 4Fe-4S dicluster domain DN405_26385 PF13091 PLD-like domain DN405_26390 PF03851 UV-endonuclease UvdE DN405_26395 PF00990 Diguanylate cyclase, GGDEF domain DN405_26395 PF00563 EAL domain DN405_26395 PF03707 Bacterial signalling protein N terminal repeat DN405_26410 PF01447 Thermolysin metallopeptidase, catalytic domain DN405_26410 PF07504 Fungalysin/Thermolysin Propeptide Motif DN405_26410 PF03413 Peptidase propeptide and YPEB domain DN405_26410 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN405_26415 PF00196 Bacterial regulatory proteins, luxR family DN405_26415 PF00072 Response regulator receiver domain DN405_26420 PF07730 Histidine kinase DN405_26420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_26430 PF00005 ABC transporter DN405_26435 PF00557 Metallopeptidase family M24 DN405_26445 PF02225 PA domain DN405_26445 PF04389 Peptidase family M28 DN405_26465 PF00750 tRNA synthetases class I (R) DN405_26465 PF05746 DALR anticodon binding domain DN405_26465 PF03485 Arginyl tRNA synthetase N terminal domain DN405_26470 PF09148 Domain of unknown function (DUF1934) DN405_26475 PF17676 LD-carboxypeptidase C-terminal domain DN405_26475 PF02016 LD-carboxypeptidase N-terminal domain DN405_26490 PF00491 Arginase family DN405_26495 PF17284 Spermidine synthase tetramerisation domain DN405_26500 PF07690 Major Facilitator Superfamily DN405_26505 PF13411 MerR HTH family regulatory protein DN405_26510 PF03009 Glycerophosphoryl diester phosphodiesterase family DN405_26515 PF00912 Transglycosylase DN405_26515 PF00905 Penicillin binding protein transpeptidase domain DN405_26520 PF08741 YwhD family DN405_26525 PF02163 Peptidase family M50 DN405_26530 PF01361 Tautomerase enzyme DN405_26535 PF01966 HD domain DN405_26540 PF01497 Periplasmic binding protein DN405_26545 PF00005 ABC transporter DN405_26550 PF01032 FecCD transport family DN405_26555 PF01032 FecCD transport family DN405_26560 PF07293 Protein of unknown function (DUF1450) DN405_26570 PF03099 Biotin/lipoate A/B protein ligase family DN405_26575 PF01515 Phosphate acetyl/butaryl transferase DN405_26585 PF07943 Penicillin-binding protein 5, C-terminal domain DN405_26585 PF00768 D-alanyl-D-alanine carboxypeptidase DN405_26590 PF07486 Cell Wall Hydrolase DN405_26595 PF09671 Spore coat protein (Spore_GerQ) DN405_26600 PF04241 Protein of unknown function (DUF423) DN405_26610 PF07885 Ion channel DN405_26610 PF02254 TrkA-N domain DN405_26615 PF00860 Permease family DN405_26625 PF12823 Domain of unknown function (DUF3817) DN405_26630 PF03167 Uracil DNA glycosylase superfamily DN405_26635 PF12679 ABC-2 family transporter protein DN405_26640 PF00005 ABC transporter DN405_26645 PF13472 GDSL-like Lipase/Acylhydrolase family DN405_26650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN405_26650 PF00356 Bacterial regulatory proteins, lacI family DN405_26660 PF01842 ACT domain DN405_26660 PF00742 Homoserine dehydrogenase DN405_26660 PF03447 Homoserine dehydrogenase, NAD binding domain DN405_26665 PF04204 Homoserine O-succinyltransferase DN405_26670 PF01053 Cys/Met metabolism PLP-dependent enzyme DN405_26680 PF13419 Haloacid dehalogenase-like hydrolase DN405_26685 PF00027 Cyclic nucleotide-binding domain DN405_26690 PF02525 Flavodoxin-like fold DN405_26695 PF00196 Bacterial regulatory proteins, luxR family DN405_26695 PF00072 Response regulator receiver domain DN405_26700 PF07730 Histidine kinase DN405_26700 PF13185 GAF domain DN405_26705 PF08543 Phosphomethylpyrimidine kinase DN405_26710 PF00990 Diguanylate cyclase, GGDEF domain DN405_26710 PF07694 5TMR of 5TMR-LYT DN405_26715 PF04328 Selenoprotein, putative DN405_26720 PF13722 5TM C-terminal transporter carbon starvation CstA DN405_26720 PF02554 Carbon starvation protein CstA DN405_26725 PF00072 Response regulator receiver domain DN405_26725 PF04397 LytTr DNA-binding domain DN405_26730 PF07690 Major Facilitator Superfamily DN405_26740 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN405_26745 PF13439 Glycosyltransferase Family 4 DN405_26745 PF00534 Glycosyl transferases group 1 DN405_26755 PF03458 UPF0126 domain DN405_26760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN405_26770 PF03061 Thioesterase superfamily DN405_26780 PF00535 Glycosyl transferase family 2 DN405_26795 PF00535 Glycosyl transferase family 2 DN405_26800 PF12848 ABC transporter DN405_26800 PF00005 ABC transporter DN405_26805 PF00440 Bacterial regulatory proteins, tetR family DN405_26810 PF00873 AcrB/AcrD/AcrF family DN405_26815 PF01641 SelR domain DN405_26815 PF01625 Peptide methionine sulfoxide reductase DN405_26820 PF01594 AI-2E family transporter DN405_26825 PF04172 LrgB-like family DN405_26830 PF03788 LrgA family DN405_26835 PF00072 Response regulator receiver domain DN405_26835 PF04397 LytTr DNA-binding domain DN405_26840 PF06580 Histidine kinase DN405_26840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_26840 PF13492 GAF domain DN405_26840 PF07694 5TMR of 5TMR-LYT DN405_26845 PF07690 Major Facilitator Superfamily DN405_26850 PF02028 BCCT, betaine/carnitine/choline family transporter DN405_26855 PF02898 Nitric oxide synthase, oxygenase domain DN405_26865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN405_26865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN405_26875 PF02293 AmiS/UreI family transporter DN405_26885 PF16363 GDP-mannose 4,6 dehydratase DN405_26890 PF03006 Haemolysin-III related DN405_26900 PF03880 DbpA RNA binding domain DN405_26900 PF00270 DEAD/DEAH box helicase DN405_26900 PF00271 Helicase conserved C-terminal domain DN405_26905 PF00478 IMP dehydrogenase / GMP reductase domain DN405_26910 PF01432 Peptidase family M3 DN405_26910 PF08439 Oligopeptidase F DN405_26920 PF00989 PAS fold DN405_26920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_26920 PF13426 PAS domain DN405_26920 PF00512 His Kinase A (phospho-acceptor) domain DN405_26920 PF13188 PAS domain DN405_26925 PF02590 Predicted SPOUT methyltransferase DN405_26935 PF13180 PDZ domain DN405_26940 PF00753 Metallo-beta-lactamase superfamily DN405_26945 PF09648 YycH protein DN405_26955 PF00672 HAMP domain DN405_26955 PF13426 PAS domain DN405_26955 PF00512 His Kinase A (phospho-acceptor) domain DN405_26955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_26960 PF00072 Response regulator receiver domain DN405_26960 PF00486 Transcriptional regulatory protein, C terminal DN405_26985 PF00709 Adenylosuccinate synthetase DN405_26990 PF03796 DnaB-like helicase C terminal domain DN405_26990 PF00772 DnaB-like helicase N terminal domain DN405_26995 PF01281 Ribosomal protein L9, N-terminal domain DN405_26995 PF03948 Ribosomal protein L9, C-terminal domain DN405_27000 PF02272 DHHA1 domain DN405_27000 PF01368 DHH family DN405_27005 PF09991 Predicted membrane protein (DUF2232) DN405_27010 PF01084 Ribosomal protein S18 DN405_27015 PF00436 Single-strand binding protein family DN405_27020 PF01250 Ribosomal protein S6 DN405_27025 PF06071 Protein of unknown function (DUF933) DN405_27025 PF01926 50S ribosome-binding GTPase DN405_27030 PF06107 Bacterial protein of unknown function (DUF951) DN405_27035 PF00924 Mechanosensitive ion channel DN405_27040 PF06866 Protein of unknown function (DUF1256) DN405_27045 PF02195 ParB-like nuclease domain DN405_27045 PF17762 HTH domain found in ParB protein DN405_27050 PF13614 AAA domain DN405_27055 PF17762 HTH domain found in ParB protein DN405_27055 PF02195 ParB-like nuclease domain DN405_27060 PF02527 rRNA small subunit methyltransferase G DN405_27065 PF01134 Glucose inhibited division protein A DN405_27065 PF13932 GidA associated domain DN405_27070 PF01926 50S ribosome-binding GTPase DN405_27070 PF10396 GTP-binding protein TrmE N-terminus DN405_27070 PF12631 MnmE helical domain DN405_27075 PF14804 Jag N-terminus DN405_27075 PF01424 R3H domain DN405_27080 PF02096 60Kd inner membrane protein DN405_27085 PF00825 Ribonuclease P DN405_27090 PF00468 Ribosomal protein L34 DN405_27095 PF08708 Primase C terminal 1 (PriCT-1) DN405_27125 PF18801 response regulator aspartate phosphatase H, N terminal DN405_27145 PF17631 Family of unknown function (DUF5512) DN405_27185 PF17362 Family of unknown function DN405_27200 PF17631 Family of unknown function (DUF5512) DN405_27235 PF00437 Type II/IV secretion system protein DN405_27260 PF04956 TrbC/VIRB2 family DN405_27275 PF12696 TraM recognition site of TraD and TraG DN405_27310 PF00877 NlpC/P60 family DN405_27320 PF17632 Family of unknown function (DUF5513) DN405_27345 PF17633 Family of unknown function (DUF5514) DN405_27350 PF17630 Family of unknown function (DUF5511) DN405_27355 PF18840 Large polyvalent protein associated domain 25 DN405_27355 PF18840 Large polyvalent protein associated domain 25 DN405_27370 PF13154 Protein of unknown function (DUF3991) DN405_27380 PF01751 Toprim domain DN405_27380 PF01131 DNA topoisomerase DN405_27410 PF00266 Aminotransferase class-V DN405_27430 PF02796 Helix-turn-helix domain of resolvase DN405_27430 PF00239 Resolvase, N terminal domain DN405_27445 PF17443 Uncharacterized protein pXO2-72 DN405_27465 PF00817 impB/mucB/samB family DN405_27465 PF11799 impB/mucB/samB family C-terminal domain DN405_27465 PF11798 IMS family HHH motif DN405_27485 PF18413 Neuraminidase-like domain DN405_27485 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain DN405_27495 PF12255 Insecticide toxin TcdB middle/C-terminal region DN405_27495 PF03534 Salmonella virulence plasmid 65kDa B protein DN405_27495 PF12256 Insecticide toxin TcdB middle/N-terminal region DN405_27520 PF02810 SEC-C motif DN405_27520 PF07517 SecA DEAD-like domain DN405_27520 PF01043 SecA preprotein cross-linking domain DN405_27520 PF07516 SecA Wing and Scaffold domain DN405_27535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN405_27565 PF00877 NlpC/P60 family DN405_27565 PF01476 LysM domain DN405_27565 PF08239 Bacterial SH3 domain DN405_27575 PF01037 Lrp/AsnC ligand binding domain DN405_27580 PF01471 Putative peptidoglycan binding domain DN405_27580 PF01476 LysM domain DN405_27580 PF01510 N-acetylmuramoyl-L-alanine amidase DN405_27595 PF00583 Acetyltransferase (GNAT) family DN405_27675 PF01022 Bacterial regulatory protein, arsR family DN405_27710 PF13152 Protein of unknown function (DUF3967) DN405_27710 PF13411 MerR HTH family regulatory protein DN405_27730 PF03315 Serine dehydratase beta chain DN405_27730 PF01842 ACT domain DN405_27740 PF00155 Aminotransferase class I and II DN405_27760 PF17362 Family of unknown function DN405_27800 PF00437 Type II/IV secretion system protein DN405_27820 PF04956 TrbC/VIRB2 family DN405_27830 PF12696 TraM recognition site of TraD and TraG DN405_27865 PF00877 NlpC/P60 family DN405_27875 PF17632 Family of unknown function (DUF5513) DN405_27895 PF01751 Toprim domain DN405_27895 PF01131 DNA topoisomerase DN405_27900 PF02517 CPBP intramembrane metalloprotease DN405_27905 PF00989 PAS fold DN405_27905 PF00512 His Kinase A (phospho-acceptor) domain DN405_27905 PF18698 Histidine kinase sensor domain DN405_27905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN405_27905 PF00672 HAMP domain DN405_27920 PF02384 N-6 DNA Methylase DN405_27935 PF13614 AAA domain DN405_27940 PF05732 Firmicute plasmid replication protein (RepL) DN405_27955 PF03432 Relaxase/Mobilisation nuclease domain