        yaaA    3003 ..    3020 +  -6.3  -4.42062   TTCCAAGTTCAGGCA             TAAAGGG GGAG CCCTTTG              TTTATTTCAGAAATA  74 23
        recF    4136 ..    4151 +  -2.5  -3.64822   AGATTGTGAAATAGA              TAGGG AATAAC CCCTG               TTTAAATGGAAAAGT  48 16
        gyrB    6116 ..    6139 +  -9.7  -3.39803   ATTTAAATGAGTAAT          GACAGGAAT CTAAGT ATTCCTGTC           TTCTACATATAAATC  81 35
        gyrA    8667 ..    8686 +   -10  -5.27709   TCTTCAGAAGAATAA            GAGAGGGG ATTT TCCCTCTC             TTTATTTTTTTATAA 100 26
 JI729_00035   10468 ..   10492 +  -8.7   -2.6836   CTCCTTTCTATGGAG          AATTGATAAGC GCT GCTTATCAATA          TAAGTTTCCGTGTTT  70 34
 JI729_00040 NONE
 JI729_00045 NONE
 JI729_00050   13779 ..   13798 +  -6.5  -2.98761   CAATGTTATCTAGTT            TTGAAGG AATATG CCTTCAA             TAGTTTGGTGATGAT  59 52
         rrf   13927 ..   13946 + -10.8  -5.95539   CCAAGCAACTAAAAA            CACAAGTC ATTT GACTTGTG             TTTTTTTATTTCCCA 100 35
        guaB   16548 ..   16574 + -12.5  -6.25242   TGTCTTATATACAAA         TAGACAGAGAT TTGAT ATCTCTGTCTA         TTTTTTTTTGATTAT 100 41
        dacA   17956 ..   17973 +    -7  -6.13503   AGGATGGTTTTAAAA             GCTCCT CATGAT AGGAGC              TTTTTTTTATTCCTA  95 28
        pdxS NONE
        pdxT   19873 ..   19900 + -17.1  -5.65678   GGCAACGCGGGTTAA        CTCCCGTCCCT TTATAT AGGGACGGGAG         TTTTTTGTGTTTTAT 100 288
        serS   21267 ..   21307 +  -3.5  -4.72007   GCGTTGTCAGTACTG TAATGTAGGAAGGGGAAA GTAAAA TTTTCCTTTCCT-CATAA  TTTATTTTAGTAGGG  66 80
 JI729_00090   21501 ..   21522 +  -8.8  -5.45802   GTGGAGATTGGAGAA           CTCGTTAC CAACAC GTAACGAG            TTTTTATTTTAAAAC 100 67
 JI729_00095   22032 ..   22049 + -12.7  -5.79595   AATTTAATAGGAAAA             CCCGTGC ATAT GCACGGG              TTTTTTATTTTACAA 100 39
 JI729_00115   24694 ..   24704 +  -3.2  -4.35926   CTTTAATGAAGGCAA                 CCGA ATA TTGG                 TTTTAACTTTGCCGT  57 83
         ffs   25002 ..   25023 +  -8.8  -5.36441   TATATGTATACAAAA           CTCACCTT AATACA AAGGTGAG            TTTTTTGTATAGAAA 100 47
        dnaX NONE
 JI729_00130 NONE
        recR NONE
 JI729_00140   28004 ..   28024 +  -6.1  -5.67711   GAACAATGGTAAAGG            GTTCTGCTT TCT AAGCAGGCC            TTTTTATTTTATTTG  95 29
 JI729_00145   28421 ..   28444 +    -9  -5.40474   TTAAGCTTTATATCA          TGCCAAGATA AAAT TATTTTGGCA           TTTTTTTAAAAAAGT 100 15
 JI729_00150   30211 ..   30235 +  -8.7   -2.6836   CTCCTTTCTATGGAG          AATTGATAAGC GCT GCTTATCAATA          TAAGTTTCCGTGTTT  70 34
 JI729_00155 NONE
 JI729_00160 NONE
 JI729_00165   33522 ..   33541 +  -6.5  -2.98761   AAATGTTATCTAGTT            TTGAAGG AATATG CCTTCAA             TAGTTTGGTGATGAT  59 53
         rrf   33670 ..   33689 + -10.8  -5.86465   CCAAGCAACTAAAAA            CACAAGTC ATTT GACTTGTG             TTTTTTTGTATTGTT 100 35
 JI729_00175   34028 ..   34047 +    -5  -6.19302   AAGTATCATATTTTT            AAATAGGC ATAT GCCTATTA             TTTTTTTTGTTCTGT  93 24
 JI729_00180 NONE
 JI729_00185 NONE
        holB NONE
 JI729_00195 NONE
        yabA   38370 ..   38399 + -15.3  -5.28176   AAATAAAAAGTGAAA       TTACCTTTCCAAT TATA ATTGGAAAGGTAA        TTTTTTATACATGAA 100 28
 JI729_00205 NONE
 JI729_00210 NONE
        rsmI   40304 ..   40339 + -13.6   -2.6621   TCTATCATGTCGATA    AAAAATAAGCTTCTCA TAAT TGAGAAGCTTATTTTG     CTGTTTCGATATAAT 100 18
        metG   43092 ..   43136 + -11.7  -4.65838   AAGTAATTAAGACAA GAAAAGAGATGTTTCACGTGT AAC ATGTGTGAAGCGTCTTTTTTC TTTTTACACTCTCTA 100 35
 JI729_00230   44020 ..   44038 +  -6.7  -5.79595   GGTGTTGAATAAAAA             GAACGGG GGAAA CCTGTTC             TTTTTTATTTTGAGA  95 29
        rnmV NONE
        rsmA   45674 ..   45698 + -17.3  -4.45577   CATAAGAATATGAAA          GGGACAGTTCA AGT TGAACTGTCCC          TTTTGTCACCTTTCT 100 36
        yabG   46638 ..   46659 +  -9.5  -4.96848   CATTACGAAGAGTAA           GCAGGATAC ATAT GTATCTTGC            TTTTTGTATGGAAGG 100 26
 JI729_00250   47100 ..   47112 +  -7.7  -3.21099   ACATTTTATGGAGAC                CCTCA TAA TGAGG                TCATTTTATAATCTG  68 2
 JI729_00255   47422 ..   47442 + -13.3  -4.95155   TTCTATGCTACGGTA            GCCGAGGAG ACA TTCCTCGGC            TTTTTGTACTCTAAA 100 53
        ispE   48464 ..   48474 +  -5.4  -3.72242   ACGCTTGAATAAAGA                 CGTA TAA TACG                 TTATGATTTGTTTAG  61 29
        purR   49366 ..   49386 +  -9.8  -6.17669   AGAGGCGGAATAAAA            GATAGAGC AGATA GCTCTATC            TTTTTTTATTTTATT 100 28
 JI729_00270   49911 ..   49925 +  -4.4  -4.59853   CAACTACTTTAAAAA               TTTTTA TCT TAAAAA               TTTTTAAAAAATTAA  65 78
       spoVG   50352 ..   50381 + -14.5  -5.75822   CTTATAATTTTGTAG       CAAACTCCTGTAA GCAT TTACAGGGGTTTG        TTTTTTTGCTTTATA 100 73
        glmU NONE
 JI729_00285 NONE
 JI729_00290   53614 ..   53626 +  -4.1  -5.08255   GTTAAAAATAAGATT                GGGAA TAT TTCTC                TTTTGTTTTACCCAT  72 36
 JI729_00295   53908 ..   53926 +  -8.9  -3.75763   CAATAAAATGTTGTC             GCTTTGG CATGT CCAAAGC             ATTTTTCTGTTTTCC  80 35
         mfd NONE
       spoVT   58301 ..   58317 + -10.9  -5.28481   TGTATATTGAATGAA              GGTAGCA CTT TGCTACC              TTTTTTCGTTGAATA 100 119
 JI729_00310 NONE
        mazG NONE
 JI729_00320 NONE
        yabP NONE
        yabQ NONE
       divIC   63180 ..   63192 +  -3.4  -2.64739   TTTCTAAGTAGAGTA                TGTC TTATT GACA                CTATATTTTAGGATT  42 30
 JI729_00340   63780 ..   63805 +  -7.5  -5.47431   TTAACATATAGAGAG         GTACCCAGAGT GATG GCTCAGGGTGC          TTTTTTATATGTTAA  90 57
 JI729_00345 NONE
 JI729_00350   64075 ..   64096 + -11.7   -5.8187   CGGGTCATCTAAAAA           GATCATGCA AATT TGCATGATC            TTTTTTTGTTAAATA 100 31
      spoIIE   66838 ..   66855 +  -9.9  -5.60993   ATTTGATTTTAAAAA             CCTAGGT GAAT ACCTAGG              TTTTTTTGTGGAAAA 100 66
        tilS NONE
         hpt   69025 ..   69035 +    -4   -3.1207   TTCACAATTGTATAG                 GAAA GTT TTTC                 TATGTTACGATTTAC  49 53
        ftsH   70993 ..   71012 + -12.2  -5.80003   TAAGTAAGAAACGAA            GGAGTGAC TATC GTCACTCC             TTTTTTGTTTGTTAA 100 34
 JI729_00375 NONE
        hslO NONE
        cysK   73955 ..   73974 +  -8.6  -5.46706   AACGCGATTGAAAAA            GCATCCTT GAAA AAGGGTGC             TTTTTCTTTTGGGAT 100 44
        pabB NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
 JI729_00420 NONE
        dusB   79967 ..   79987 +    -9  -4.98857   TGAAAGAAAGAAGAG            CTGCCAGT TAGTT GCTGGCAG            TTTTTCTAGTTGAGT  93 90
        lysS   81562 ..   81583 + -13.1  -5.95539   CATAAACAAGACTAA           GCTTTGGAG ATTT CTCCAAAGC            TTTTTTTATTTGAGC 100 26
 JI729_00435   83483 ..   83494 +    -3   -3.1505   GCTGGATCACCTCCT                TTCT ATGG AGAA                 TTGATAAGCGCTGCT  45 24
 JI729_00440   86579 ..   86596 +  -5.6  -2.98761   AATGTTATCTAGTTT             TGAAGG AATATG CCTTCA              TAGTTTGGTGATGAT  56 53
         rrf NONE
 JI729_00450   86794 ..   86817 +  -2.2  -2.86343   AGGTTCAAATCCTGT          CCCCGCAACC AAAT GGTCCCGTGG           TGTAGTGGTTAACAT  40 15
 JI729_00455   86903 ..   86919 +  -9.5   -4.6372   ATATAAAGAAAAGAA              CGAAACA AGT TGTTTCG              TATTTTTTTATTTGT 100 45
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD   89708 ..   89743 + -13.6  -3.64466   ACCACAGGTTGTGGA    TAAAACCCATATTGTC TGTT GATAATGTGGGTTTTA     TTGTGTATATAAAAT 100 56
 JI729_00485   92897 ..   92940 + -14.1  -4.63048   TTTTTGAAAAACTAT CCACAATAAAACGCAGAGG AAGCGA CCTCTGCGTTTTATTATTG TTTCTTCTTTGTGAA 100 17
       groES NONE
       groEL   96241 ..   96266 + -13.5  -6.18768   GTTTGCCCTAAAAAA         CATCCATTTCT ATAT AGAAATGGATG          TTTTTTTTATGTTTT 100 45
        guaA   98180 ..   98210 +  -9.9  -5.63517   TAGTATTTATAAAAA      GGTCCATCTATTGC TTAT GCA-TAGATGGATC       TTTTTTATTTCGGCA 100 38
 JI729_00515   99894 ..   99920 + -11.7   -5.1615   AGGGGGTTTTTTAAA         GGTCTAGACTT AAGGG GAGTCTAGACC         TTTTTTGCGTCTTCA 100 41
 JI729_00520 NONE
        ampS  102243 ..  102266 +  -8.3  -5.41787   GATATGTGATAAAAA          GGCTTATTT TAAAAT AAATAAGCC           TTTTTATATTTTTTA  95 55
 JI729_00530  104121 ..  104138 +  -8.5  -2.94622   CGTTTTGTTCAGTTT             TGAGAGA ACTA TCTCTCA              TATATAAATGTATGT  69 88
 JI729_00535  107153 ..  107172 +  -6.5  -2.98761   CAATGTTATCTAGTT            TTGAAGG AATATG CCTTCAA             TAGTTTGGTGATGAT  59 52
         rrf  107300 ..  107320 + -14.1  -5.65678   GCCAAGCAACTTTAA            GACGAGTCA GAA TGACTCGTC            TTTTTTGTGTTTTAT 100 34
 JI729_00545  108545 ..  108584 + -10.2  -5.87996   TTGCATTTATATAGA  CGATAATCGGAGGGATAA TAGT TAATCCTTTTGATTATCG   TTTTTTTGTTAATTA 100 50
 JI729_00550  109468 ..  109495 +  -8.4  -3.61239   TTTTATAGTAGAGTA        GTACCCCATAGA TAGT TCTGTGGGGAGC         TTGTATATAACTATA  74 42
 JI729_00555  111329 ..  111340 +    -3   -3.1505   GCTGGATCACCTCCT                TTCT ATGG AGAA                 TTGATAAGCGCTGCT  45 24
 JI729_00560  114421 ..  114440 +  -6.5  -2.98761   CAATGTTATCTAGTT            TTGAAGG AATATG CCTTCAA             TAGTTTGGTGATGAT  59 52
         rrf  114568 ..  114588 + -14.1  -5.65678   GCCAAGCAACTTTAA            GACGAGTCA GAA TGACTCGTC            TTTTTTGTGTTTTAT 100 34
 JI729_00600  121806 ..  121823 +  -8.5  -2.94622   CGTTTTGTTCAGTTT             TGAGAGA ACTA TCTCTCA              TATATAAATGTATGT  69 88
 JI729_00605  124839 ..  124856 +  -5.6  -2.98761   AATGTTATCTAGTTT             TGAAGG AATATG CCTTCA              TAGTTTGGTGATGAT  56 53
         rrf  124984 ..  125004 + -14.1  -5.43487   GCCAAGCAACTTTAA            GACGAGTCA GAA TGACTCGTC            TTTTTTGTATGCTTT 100 34
 JI729_00630  129104 ..  129159 + -21.6  -5.01422   AGTTCTTATGTAGTA AAAAATAATAACCCACGCTCTACTTG TATA TAAGCAGAGCGTGGGTTATTATTTTA TTTCTTTTTCTATAA 100 18
 JI729_00645  133999 ..  134010 +    -3   -3.1505   GCTGGATCACCTCCT                TTCT ATGG AGAA                 TTGATAAGCGCTGCT  45 24
 JI729_00650  137092 ..  137111 +  -6.5  -2.98761   CAATGTTATCTAGTT            TTGAAGG AATATA CCTTCAA             TAGTTTGGTGATGAT  59 52
         rrf  137236 ..  137256 + -10.5  -5.73339   GTCGCCAAGCAAGAA            CCTAAGTCG TTT TGACTTAGG            TTTTTTTGTGCTTAT 100 31
 JI729_00660  138436 ..  138457 +  -8.1  -5.63517   TTGAAATGTTAAAAA           GATACCTTA TATA TGAGGTATC            TTTTTTATTTAGCAA  95 59
 JI729_00670  141145 ..  141156 +    -3   -3.1505   GCTGGATCACCTCCT                TTCT ATGG AGAA                 TTGATAAGCGCTGCT  45 24
 JI729_00675  144239 ..  144258 +  -6.5  -2.98761   CAATGTTATCTAGTT            TTGAAGG AATATG CCTTCAA             TAGTTTGGTGATGAT  59 52
         rrf  144383 ..  144403 +  -9.8  -5.90231   GTCGCCAAGCAAGAA            CCTAAGTC ATTTC GACTTAGG            TTTTTTTGTGTTTAT 100 31
        purE NONE
        purK NONE
        purB  148053 ..  148080 + -12.9  -4.06419   GCGTAAAATTTCATA        TGGCACAGAAT AGAGTC ATTCTGTGCCA         TTATTTATAAAAACA 100 35
        purC NONE
        purS NONE
        purQ NONE
        purL NONE
        purF  153411 ..  153427 +  -3.7  -3.10611   GCTTCTACTTCTTTT              GATGTAG AAG CTAGATC              CTTTCTTAAAATAGC  47 55
        purM NONE
        purN NONE
        purH  156725 ..  156751 + -14.6  -3.07858   ATTGATATGAAAAAG         CAAACTAGGAGC ATA GCTTCTAGTTTG         TACTTATTTAATTAT 100 79
        purD  158062 ..  158083 + -14.5  -5.30686   GTTAATATGTAAAAA           TCCCGCTGA GGAA TCAGCGGGA            TTTTTTATGCATCTT 100 36
 JI729_00760 NONE
        pcrA NONE
        ligA NONE
 JI729_00775  166246 ..  166266 + -11.2   -5.9218   AGATTAAATATGAAG            GCTGTTCC TCTAT GGAACAGC            TTTTTTTCTTATATA 100 34
 JI729_00780  167102 ..  167127 +  -7.7  -5.94214   TATACTCATATTTTG         TAGATTCATAC GCAT GTATGAATCTC          TTTTTTTATTATATT 100 23
        pruA  168816 ..  168844 + -20.5  -4.19238   ATAAGAAATAGTAGA        GGAGCTCTTCACA GAA TGTGAAGAGCTCC        TTTTAAAATTGAACC 100 37
 JI729_00795 NONE
 JI729_00800 NONE
 JI729_00805  172783 ..  172802 + -12.2  -5.64274   TTAAGTAGAGTGATA            GACCAGGA GTTT TCCTGGTC             TTTTTTTATGAATGA 100 165
 JI729_00830  175738 ..  175755 +  -9.9  -5.71712   AGAGTAAATTGTAAA             GAAAGGC ATTT GCCTTTC              TTTTTTTATGTAAAA 100 34
        gatC NONE
        gatA NONE
        gatB  179103 ..  179130 + -13.6  -2.56596   TTTAAAGATTAAGCA        GAAAAACACCCG TACA TGGGTGTTTTTC         TAGGTTAATCAAACG 100 52
 JI729_00850  180527 ..  180547 +  -9.7  -5.09521   TCCTGAACATCAAGA            GGATGCCCT GTA AAGGCATCC            TTTTTACTTTGTTAA 100 13
 JI729_00855  181429 ..  181467 + -19.3  -5.28176   AATGTGTAAGGAAAA   TAAGTCTATAAAGACTC TTAAT GAGTCTTTATAGACTTA   TTTTTTATGCCTGGA 100 32
        gabT NONE
 JI729_00865 NONE
        gabD NONE
 JI729_00875  186242 ..  186263 +  -8.1  -5.59879   ATCGGCATCATGAAA           GCTATCTTT TGTA GAAGATAGC            TTTTTTCTATTTGTG  95 28
 JI729_00880  186865 ..  186893 + -11.9  -3.99592   AACCAAATAAATAAA        GAAACACATTAGA TTA TCCAATGTGTTTC        TTTATGGTAATAAAT 100 27
 JI729_00895  190603 ..  190628 +    -7   -5.4833   ATGACAATAAAAAAA         TCACC-TTGCT GTCTA AGCAAAGGTGA         TTTTTTATTAAATAA  89 44
        rlmD  193642 ..  193674 +  -7.8  -4.98531   TAGTATAATAGGAAA      GCAGTTGATATAGA AAAAA TCTATACCACCTGC      TTTTTGGTTTACAAA  88 33
 JI729_00910  194855 ..  194897 + -11.7  -4.49337   ATAAGTGCAGAGCTG GAAAAGAACAGTGTATTTGA GAAA TCAAA-GCACTGTTTTTTTC TTTTAGTTAATGTTA 100 95
 JI729_00915  195691 ..  195714 +  -6.8  -5.72622   ATGATATAATAGGTA          GAGTAGGA CGTTCGTA TCCTACTC           TTTTTTATTTGTAAA  95 61
 JI729_00920  196657 ..  196680 +  -6.7  -5.08169   GAAGCGAAAGTAAAA          GGAGAGGTC ACAGCA GACATCTCC           TTTTTTCGAGTATAT  83 224
 JI729_00935  200144 ..  200161 +  -6.3  -3.61398   GTAGTCCTTTTTCTG             TGTATGC ATTT GCGTACA              TTCTTGAAGGGACAA  61 286
 JI729_00945  202693 ..  202712 +   -10  -5.67063   GAAAGTGTTAGAAGA            CAGGGGCT AAAG AGCTCCTG             TTTTTTTGTCGTGAA 100 16
 JI729_00950  203544 ..  203573 + -12.3  -3.35867   ATACATTAGGGTAAT       AAAAAACAGGTGC CAAG GCACCTGTTTTTA        TTAGTTACGGATTAA 100 27
 JI729_00965 NONE
        mtnA NONE
 JI729_00975  209267 ..  209290 + -15.4  -5.16472   AGAATGAAACAAAAA          CACCCTCAAG AAAT CTTGAGGGTG           TTTTTTAAGCTTTTT 100 39
 JI729_00995  213703 ..  213749 + -16.1  -4.51363   TAAGGAACAAGTACA CCCCCACGTATTTCTCT-ATTC AAAT GGATGAGAGATGTACGTGGGGG TTTTCCTGTTTACTA 100 41
 JI729_01005  214684 ..  214723 +  -8.1  -5.63517   TTAAACTATGGAAAA  TCCCTTATGAAGATATG CAGAAA TGTATATTCATAAGGGA   TTTTTTGTTTGAAGA  95 37
 JI729_01010 NONE
 JI729_01015 NONE
 JI729_01020  216730 ..  216770 +  -9.3  -4.00914   TAGATTAGTTGGAAG GGCT-GACTTTTTCTTTT ATATGC AGAAGAAAAGGTCGAGCC  TATTTGTTTTAGTTT  86 38
 JI729_01025  218228 ..  218263 + -20.8  -3.36968   TTGGATATAAGTTGT    TACTAAAAGGAAGGAG AGAT CTCCTTCCTTTTAGTA     TTATAAGGTTAAATA 100 31
 JI729_01030  219763 ..  219778 +  -6.8  -5.36441   TGAAAAGATAAGAAG              GGGTGC ACGC GCATCC               TTTTTTCTATGCAGA  89 202
 JI729_01035  220182 ..  220205 + -10.4  -6.04378   ATAAAAAAAATAGAA          GCAAAGGTCA ATGA TGATCTTTGC           TTTTTTTTATAGTTT 100 12
 JI729_01045  222325 ..  222344 +  -7.9  -5.60864   AGAAGTTTTATTAGG            CTGTCAG TAATTT CTGACAG             TTTTTTTAGTATGTA  95 39
 JI729_01050  223194 ..  223215 +  -9.5  -5.54907   GGAGCATATGAAAAA           GAGCACAAG TAAG TTTGTGCTC            TTTTTATTTTGTAGG 100 14
 JI729_01065  227879 ..  227910 + -16.1  -3.29461   ATATATTTTTGCAAT      GAAAAAGCAAGCC ATCTCA GGCTTGCTTTTTC       TTATAAAGAAACTTC 100 47
 JI729_01085  231855 ..  231879 +    -8  -5.67283   ATTTTCAATGTAAAA         G-GAAGAACAG AATG CTGTTCTTCTC          TTTTTTATTTAGCTT 100 28
        argR  232458 ..  232486 + -14.9  -5.30616   ATTTAGATGCAAAAA        TCCTGTTTTTAAT AAA ATTAAAAACAGGA        TTTTTGTTTAAATAC 100 35
        arcA NONE
        argF  234972 ..  235011 + -16.8  -2.91322   TACTTTAGGAAACAT  GGAGTAAAGAAGAAAGGGA GTC TTCCTTTCTTCTTT-CTCC  TCCTTTAGACACTAT 100 19
        arcD NONE
        arcC  237525 ..  237547 + -12.2  -5.48514   CTTATTAGTAAAAAA           GAATGAAGTT AGT AACTTCATTC           TTTTTATTTATTAAT 100 57
 JI729_01115  238427 ..  238450 +  -7.6   -5.1925   GTGTATATTAATAAG          GTTCTTTATA TATT TATAAGGAAC           TTTTTTACGTTATCC  90 69
 JI729_01120  239287 ..  239324 +  -5.7  -5.84432   GAAAATCAACTTGAA   TCATCCAACATACTG CGAGGTAA CGGTATATTGGGTGA    TTTTTTTATGTTATC  93 89
 JI729_01130  241710 ..  241726 + -10.9  -5.60993   TTCATAATAAAAAAG              GATGCTC TTT GAGCATC              TTTTTTTATGAAAAA 100 34
 JI729_01135 NONE
 JI729_01140  244386 ..  244415 +  -9.5  -5.28826   GATTTTTTTTAGGAA       TACAAGTATTTCC AAGA GAAAATACTTGTA        TTTTTTATGACATTT 100 76
 JI729_01145  247510 ..  247535 + -13.4  -5.33405   TTCACTAAAATAAAA         GGTTCCTACC GATAGA GGTAGGAACC          TTTTTGTTTAATCAA 100 33
        thiM NONE
 JI729_01160  251838 ..  251867 + -13.8  -5.27335   CATTTGATTAAAAAA       GCACAAACCTTT TTAAAT AAAGGTTTGTGC        TTTTTCTTTAAAACA 100 104
 JI729_01170  255440 ..  255484 + -19.8  -2.65766   GCGAATAAGGAGAAA GTTCAATTC-TAATCAAGGGA ATCC TCCCTTGATTATGAATTGAAC TAATCTGCCCTTTAA 100 33
 JI729_01175  259334 ..  259358 + -17.3  -5.16681   ATAACTTGCATACAA          GGCTTTCCTAC GCA GTAGGAAAGCC          TTTTCTTATTTTTGA 100 213
 JI729_01180 NONE
 JI729_01185 NONE
 JI729_01190 NONE
 JI729_01195  262397 ..  262440 +   -20  -2.74756   ACTCAACAATATGAA TAAAGAAAAGGCATTAGCTT TTAT GAGCTAATGCCTTTTCTTTG TGATTAACATGATTT 100 214
 JI729_01210 NONE
 JI729_01215  265961 ..  265973 +  -3.5  -3.86266   AATAAGGGAGGCTTT                TAAAT GGA ATTTA                TTATTGTCATACTAT  54 36
 JI729_01220  266216 ..  266235 +  -5.7  -4.85782   GGTGATTGATAAAAA            TGCGCCT TATATT AGGCGTA             TTTCTTTTTAAACAA  77 32
 JI729_01225  266493 ..  266508 +  -4.7  -5.10877   AAATAAGGAATATAG              CCTCT TGCGAT AGAGG               TTTTTGATTTGTTAT  75 39
 JI729_01230  267130 ..  267153 +  -4.6  -4.63932   TTGTTAAAAGGAATG          GCAGCTGA ATAATAGG TCAGTTGC           TTTTCTTACAAAATA  68 14
 JI729_01235  268450 ..  268467 +  -7.7  -5.27335   AAATAACTATTGTAA             GGGAGCA AAAT TGCTCTC              TTTTTCTTTGAGGAA  90 35
 JI729_01240  268782 ..  268817 +   -15  -3.42768   GCACCTTTAAAAATA    AAAAAGATCCTCTTCT TATG AGAAGAGGATCTTTTC     TTATAGCGTTTTAGT 100 59
 JI729_01255  272258 ..  272284 + -10.9  -5.65678   GGTAACGCCGGCAAA        GCTCG-GTCCCT ATTT AGGGACGCGGGC         TTTTTTGTATTTTCT 100 312
        proS  273775 ..  273812 +  -4.2   -5.1417   GATAGGTGATAAAAA   GGACTTTGGGCTGCAT AATAAA ATATAATCCAAAGTCC    TTTTTAGTTTTATAC  72 51
 JI729_01270  275863 ..  275879 +  -5.9  -3.00946   GAGAAGAATACAATA              TTTTCCG ATT TGGAAAA              TGCTTTGTAGAAAGG  56 112
 JI729_01275 NONE
 JI729_01280  277122 ..  277160 +    -7  -4.59773   AATAGATTTGATTTA   TATATCCATTGGTGAA ATGTATG TTTACTGATGGATATA   TTTTTAAAGATAAAC  78 39
 JI729_01285  277776 ..  277794 + -11.8  -5.49809   TTGGATGCATAGAAA             GGAAACGA TAT TCGTTTCC             TTTTTTTGACCTTTC 100 29
 JI729_01290  278745 ..  278756 +  -2.2  -4.19238   TTGGAGGTGAACTGT                TGTG TTTT CACG                 TTTTACACTTCAACC  52 134
 JI729_01295  280354 ..  280367 +  -3.8  -3.49419   TCACAAACAATAAAA               GGAC TATTTC GTCC                ATTTTTATAAGGAAA  50 2
 JI729_01300  281481 ..  281516 + -16.4  -3.12482   ATTACAAGGGTAAAT    GAAAAGGCAATGAGGA AGAG TCCTCATTGCCTTTTA     GTTTCTCTTCACTAA 100 28
 JI729_01315 NONE
 JI729_01320 NONE
 JI729_01325  286842 ..  286863 + -10.9   -4.9448   TATCATTAAAAAAAA           CGGGT-CCTC TAT GAGGGACCCG           TTTTATTTGCTGCCT 100 189
 JI729_01335  290037 ..  290056 +  -9.4  -5.14563   AAAGCGATTACAATG            GAAGAACA GTAC TGTTCTTC             TTTTTTCATAGAAAA 100 49
 JI729_01340  290818 ..  290858 + -12.3  -4.39877   GTGGGATTATAAAAA GATACTCTCAAAAATAGT GGATAG ACTATTTT-GAGAGTATC  TTTCTTGCTTGTTAA 100 29
        lepB  291535 ..  291558 + -10.4   -5.7946   ATAAAGTAAAAAAAA          CCAAGCAAAT TTTA GTTTGCTTGG           TTTTTTTGTTAAACA 100 32
 JI729_01355  295404 ..  295416 +  -9.1  -5.47218   AAAGAAAAAGAAAAA                CCGCT AAT AGCGG                TTTTTTTAGCTGAAA 100 19
         cax NONE
 JI729_01380  298898 ..  298917 + -12.2  -5.69473   AATAACATGAAAAAA            CGTCAGCT TATA AGCTGACG             TTTTTTTATAATGTA 100 36
 JI729_01390  300458 ..  300482 + -11.5  -5.09762   ATAATATATTAAAAA          GGCTACCAATT CCA ATTTGGTAGCC          TTTTTCTGTTCGGGT 100 37
        fumA  302178 ..  302202 + -15.9  -5.60864   TAAGTAAATAAAAAA          TGCATCTCGAA TGA TTCGAGATGCA          TTTTTTTGGTATATA 100 34
        pdaA  303074 ..  303095 + -13.1  -4.49981   GTAAAAGGCAATCAA           CCGTAAGCA TGTA TGCTTACGG            TTTTCTCATGCTATA 100 20
 JI729_01405 NONE
        rlmD  305403 ..  305427 + -14.5  -4.52589   AGTAAAGTTTATTAA          TATTCCCTCAT GGT ATGAGGGAATA          TTTTCTATGAAGGAG 100 36
        truA  306202 ..  306219 +  -7.7  -5.63374   TGGCAAATAAAAAAA             TCGGGCT AAGT AGCTCGA              TTTTTTTAGTATTAC  95 41
 JI729_01430 NONE
 JI729_01435  310012 ..  310037 +  -4.8  -5.61596   ATAGTGATTAATTAG         GAGACTGT AAAATTGTAA ACAGTCTC          TTTTTTTGTGAAAAT  85 40
 JI729_01440  311383 ..  311408 + -11.3  -5.15634   ATTTGTATAGTAAAA         TCGTACGAGTA TGTA TACTTGTACGA          TTTTTTAGTGAACTA 100 41
        ytaF NONE
 JI729_01455  313138 ..  313153 +    -9  -5.08169   GAAAAAACATTAAAA              GCACCT ACAT AGGTGC               TTTTTTACCGTATAT 100 28
 JI729_01470  316444 ..  316492 +  -6.4  -5.84381   TAAATAATGAGATAA GAGGATGT-C-CAAAAAGATTGAT AAC ATCAATTTTTTAGAGGATATCCTC TTTTTTTGTTAATAA  95 38
 JI729_01475  317936 ..  317951 +  -7.6  -5.97575   TTGAAGTGTAAGAAA              CTATCC TTTT GGATAG               TTTTTTTTATGCCTT 100 30
 JI729_01480 NONE
 JI729_01485 NONE
 JI729_01490 NONE
 JI729_01495 NONE
 JI729_01500 NONE
 JI729_01505 NONE
 JI729_01510  324189 ..  324200 +    -3  -2.96873   TAAATGAAGTTAACA                CTAT ATAT ATAG                 TAGTTTGCTCAACAT  44 34
        pflB  326592 ..  326627 +  -8.3  -3.40597   ATGTAAATGAAAAAA    GTGTCCCTTCGCTCT TAATAT ATAGCGAAGGGAGGC     TGTTTCAATAAAGGA  73 35
        pflA  327378 ..  327402 + -12.3  -5.13137   TATATTTTACAAGCG          GTCTAATCCAA ATA TTGGATTAGGC          TTTTTGCTTTCTTTA 100 20
 JI729_01525  329215 ..  329256 + -12.5   -2.7094   TGGATAAAGTTGTCC ACAGCAAAAAAGTCCCTTA TGTA TAAGGGGCTTTTTTGCTTA  CTTCTATCAGTCGAG 100 278
        recX NONE
 JI729_01555  333760 ..  333782 +  -9.2  -4.51363   CAAGAAAAATAAAAA           CCAGAGAG CATATAT CTCTCTGG           TTTTCATCTTTGGTA 100 29
 JI729_01570  334564 ..  334577 +  -8.1  -5.58454   GAAACATTAAAAAAA               GCGAC TTAA GTCGC                TTTTTTTAATGTGGA  95 31
        mutY  336819 ..  336840 + -10.2   -5.1861   GCAATAAATAAAAAA           GTGTTCCC AATCTA GGGAACAC            TTTTTTAATCGTAAG 100 34
 JI729_01590  337488 ..  337511 +  -7.5   -5.2853   GTAATGAAAGAAAAA          CACTTCTCT AATTCG GGAGAAGTG           TTTTCTTTTTGCGTG  86 37
 JI729_01595  337952 ..  337981 +  -5.8  -5.10767   ATCTTCAGGTGAAAA       GTCCTTCTTTGT ATGGAA ATAGAGAAGGGC        TTTTTCTATTACATG  79 52
 JI729_01600  338731 ..  338761 + -16.2  -2.73875   GTACAGAAATTAAAA       CAAACCTGCAGGGG GCT TCCCGGCAGGTTTG       TCCTATTAGAGGGGG 100 28
 JI729_01605  340527 ..  340552 +   -12  -5.85737   AACATATAACAGAAA         CAGCTCCTTT AGCATA AAAGGAGCTG          TTTTTTTATTCGTCT 100 9
 JI729_01625 NONE
 JI729_01630 NONE
 JI729_01635  350687 ..  350723 + -13.2  -2.54015   CTAAGGGATAAATCA    GTTCTCCACCTCAT ACATATAAA ATGAGGTGGAGGAC    ATGTTATGGGGATTT 100 61
 JI729_01640 NONE
         bcp  351740 ..  351756 +  -8.7  -5.37043   ATGATAGTATTCCAA              GTGCGAT TAT GTCGCAC              TTTTTTCTATGGAAT 100 137
        perR  352365 ..  352406 + -23.4  -3.50447   AGGCGTAATATATAA TAAAGAAAGAGGCTGACG GCTATA CGTCAGCCTCTTTCTTTA  TTATATAAGGATTAG 100 33
 JI729_01655  352978 ..  352999 +  -6.7  -4.77157   TAAAACAATTAAAAA           GTTGATTTT TTAA GAAATCAAC            TTTTTAATGAGTTGA  80 56
 JI729_01665  355428 ..  355445 +  -8.5  -2.94622   CGTTTTGTTCAGTTT             TGAGAGA ACTA TCTCTCA              TATATAAATGTATGT  69 87
 JI729_01670  358490 ..  358514 +  -5.1  -3.45737   AGAGAACATAAAAAA          CTTGTTGACTT TTA AAGTAAATAAG          TTATAATAATGATTG  57 70
         rrf  358653 ..  358663 +  -5.4  -3.39288   TGTGAGAGTAGGACG                 TTGC CAG GCAA                 TATTATTCCGCAGTA  57 17
 JI729_01680 NONE
 JI729_01685  358853 ..  358870 +  -4.1  -2.70932   ATAGGATTTATAATA             TTTGGCC CGTT GGTCAAG              TGGTTAAGACACCGC  46 40
 JI729_01690 NONE
 JI729_01695 NONE
 JI729_01700  359103 ..  359126 +  -2.2  -2.86343   AGGTTCAAATCCTGT          CCCCGCAACC AAAT GGTCCCGTGG           TGTAGTGGTTAACAT  40 15
 JI729_01705 NONE
 JI729_01710 NONE
 JI729_01715 NONE
 JI729_01720 NONE
 JI729_01725 NONE
 JI729_01730 NONE
 JI729_01735 NONE
 JI729_01740 NONE
 JI729_01745  359933 ..  359943 +  -2.4  -3.69938   ATCACCGGTTCAAAT                 CCGG TTG CCGC                 CTTTTCTTTTGTGCC  47 9
 JI729_01750  360057 ..  360079 + -10.7  -5.95449   GAACGGCGTAAAAAA           GCTCTATAC AATTA GTATAGAGC           TTTTTTATTTTCTTT 100 45
 JI729_01760  361556 ..  361582 +   -13  -5.63504   AGTAATACGATAGAA         GACCCTTTTCGC TTA GCGGATAGGGTC         TTTTTTTATGAAGTT 100 36
 JI729_01765  362161 ..  362196 +  -2.7  -5.40625   AGATTGTAAAGAAAA    GAGTAGCCGATTTGAG ATACA TTCGAATCA-CTACTC    TTTTTTGTATACTGT  72 32
 JI729_01770  363426 ..  363447 +  -9.5  -5.47821   AGCAGTAAGTTAAGA           GAAGTTCCT ACAG AGGAGCTTC            TTTTTTTGAATAAAT 100 28
 JI729_01775  364249 ..  364286 + -13.7  -5.09225   GGCAATTGATAAAGA   ATTGAAAAAGTGATGAG GTTT CTCATCACTTTTTCGAC    TTTTTTCGATAAAAT 100 13
 JI729_01780  364487 ..  364523 + -10.3  -5.32699   ATAAATTGTGATCAA    CGCAGTGTTTCGTTT CCGAGAT AAACGAGGCATTGCG    TTTTTTAATGTTTGA 100 61
        queG NONE
 JI729_01790 NONE
        trmL  367274 ..  367289 + -10.4    -5.626   AATCGTTTATTAAAA              GTCGCC ATAT GGCGAC               TTTTTTTATAAAATA 100 28
 JI729_01800  369473 ..  369493 + -12.7   -5.4251   TTATAAATAAAAAAA            TGATGTGCT AAA AGCACATCA            TTTTTTATGTGTACC 100 31
 JI729_01805  371762 ..  371790 +  -5.3  -4.80959   AGTTTGATAACAAAA        CGCTGTCTC TTGTATTTTGC GGGACAGCG        TTTTATTATCCGTTC  72 39
        yhbH  373377 ..  373391 +  -8.6  -4.89054   GAGAAAATGGCATAA               CCTCTT TTA AAGAGG               TTCTTTTTTTGTAAA  93 26
 JI729_01815  376736 ..  376753 +  -9.9   -4.6635   TAATAGAGTGAAAAA             CCCATTC ATAT GAATGGG              TTTTATTACGGATTT 100 323
        colA  381569 ..  381600 + -12.4  -4.61482   ATATCGGTTATTTAC      TAGGAGGAGCCTGT CACA ATAGGCTTCTCCTG       TTCTTTTTTAGGGGG 100 107
 JI729_01835 NONE
 JI729_01840  383995 ..  384029 +  -9.6  -2.55378   AGAATAAAAAAGGTA     TGTATTAACTCTTT AATAGAA AAAGAGTTAATGCA     ATTAATCGTGTAATT  75 150
 JI729_01845  386094 ..  386122 + -11.2  -5.60993   AATAACAAATATTAA        GAAACGAGGTAA TAATT TTACTTCGTTTC        TTTTTTTATGAAGAG 100 39
 JI729_01850 NONE
 JI729_01855  388542 ..  388567 +  -8.4  -5.17054   CTTCATAATAAAAAA         CAGTAGAGGA TTTATT TCTTCTACTG          TTTTTTGCGTCTTAT  93 33
 JI729_01865  390398 ..  390421 +  -9.7  -4.80736   TTGCGAGTGATGAGA          GATGTGTAG AAATAA CTACACATC           TTTGTTTGTTTCCTA 100 31
 JI729_01870  391032 ..  391071 + -17.6  -3.16564   GGTGGACATCATTAA  TGATAGAAAAAGACAACT ATAT AGTTGTCTTTTTCTATTA   TTACTCAGGTGCAAA 100 26
 JI729_01875 NONE
 JI729_01880  392960 ..  392973 +  -3.1  -2.76322   TTACATATAATGTGC               CACTT TCTT AGGTG                TGCTCTATTCCCTAG  43 225
 JI729_01885 NONE
        ugpC NONE
 JI729_01895  395649 ..  395659 +    -4  -2.77344   GCTGAGAGAAAGGTG                 CATT ATA AATG                 ATTGTTAAACAGTGG  47 14
 JI729_01900 NONE
 JI729_01905  397879 ..  397911 + -20.1  -3.86346   GAGTCAAAAATAAGA      GAAAGCCGTATCCTT AAA AGGGATACGGCTTTC      TTTATAGGGAGATAA 100 28
 JI729_01910  399033 ..  399066 + -13.5  -5.46657   ATATGTAATAAAAAA     TTGAAAGAGATAAGA GGAA TCTTATTTCTTTCAA      TTTTTTATTAAGCTA 100 22
 JI729_01915 NONE
 JI729_01920  401155 ..  401182 + -14.3  -5.44119   AAATATAAGTAAAAA        GACGACCTTGT TTTTAC ACAAGGTCGTC         TTTTTTTAAGGTAAA 100 33
 JI729_01925 NONE
 JI729_01930  403031 ..  403071 + -12.9  -5.71983   TTTTTTGTTACGAAA  TAAGAGAACTTGAACTTAT TAT ATAAGCTGAAGTTCTCTTA  TTTTTTTATGATTAC 100 91
 JI729_01935  405212 ..  405243 + -11.8   -5.0916   TATAATAACAGCAGA      TAAGTAAGGTGAAA ATAA TATCACCTTACTTA       TTTTTCTATTCAGCA 100 36
        dcuS NONE
 JI729_01945  407583 ..  407613 + -18.6  -5.63103   AAAATAGAGTTTTAC       GTATAAGCGACTTA ATA TAAGTCGCTTATAC       TTTTTTTAATTACAA 100 20
 JI729_01950  409066 ..  409089 + -12.6  -3.36492   TTCATGATCAAACAA          GCTAGCTATA TTCA TATAGCTAGC           TTGTCAAATTAAGGG 100 34
 JI729_01955  410326 ..  410346 + -15.5   -5.0538   TATTAATAGCTAAAA            GCAGTGCCT AAA AGGCACTGC            TTTTTTGAGATAAGA 100 35
 JI729_01970  413759 ..  413799 +  -9.3  -4.75288   GCATGGTTTACAAGA  AAGTAAAAAACATCCTC CAAACAT GAGGATGTTTTTTATTA  TTTATTTTCATCTAA 100 20
        fdhF NONE
 JI729_02005  422890 ..  422910 +  -6.9  -5.35354   AGAATAAATGAAAAA            GTGATGG GAAGTAG CCATCAC            TTTTTTCATTATATG  89 39
 JI729_02010  424890 ..  424916 + -16.7  -6.58542   TATTTATAAGTTACC         CAGCTGCTAGC TAAAT GCTAGCAGCTG         TTTTTTTTTTTGAAA 100 12
         ald  426460 ..  426486 +   -11  -3.61398   AAAACAACATGATAA         GAGCTAAGAG TGAAGAT CTCTTAGCTC         TTCTTGGCAAAAGGG  90 77
 JI729_02020  427948 ..  427976 + -11.8  -5.62288   ATATAAGTATAGTAA       GCCTTGTGCGTCT AGGG AG-CGCGCAAGGC        TTTTTCTTTTGTTGA 100 46
 JI729_02025  428622 ..  428642 +  -3.9  -5.36441   AAAGTAAGTAAAAAG            GGGTGTGCG AAT TGTGCATCC            TTTTTTGTATGAGAA  76 34
 JI729_02030 NONE
        cadA  431581 ..  431623 + -14.4   -3.2594   ATTAAGAGTGAAAGA TTTATAAAAAAGAGGACGCG ACC CGCGTCCTTTTTTTTATTGG TGATTTTGTTGAAAT 100 19
 JI729_02045 NONE
        nprX  434866 ..  434887 + -14.5   -4.7889   AATTTATAATCTCCC           CCCCTTTCC AACA GGAAAGGGG            TTTTTCAATATTTGT 100 32
 JI729_02055  436763 ..  436790 + -15.8  -5.68039   AAAATACCTCAAAAA        TAAAGAAGGAGC ATAG GCTCCTTCTTTA         TTTTTTTCTCCATTT 100 64
 JI729_02065 NONE
 JI729_02070  438524 ..  438567 + -19.3  -3.58518   TTTTTTACTATTACT GCA-AAAGAAAAAGGCGTGA TTTAC TCACGCCTTTTTCTTTATGC TATTTGGTTGATATT 100 7
 JI729_02090 NONE
 JI729_02095 NONE
        aspA  446108 ..  446139 + -14.6  -4.59511   AAGAAATGTAATGTG      AAAAACACCGATCC ATTT GGATCGGTGTTTTA       TTTTTAAAAGATATT 100 30
 JI729_02110  448889 ..  448907 +  -8.2  -6.02919   AATATTATGGAAAAA             GACGTGTA GAA TATACGTC             TTTTTTTATTTGTCA 100 47
 JI729_02115  449246 ..  449269 +   -14  -5.30348   AGAAGTAATAAAAAA          GACGCTTCTA ATTT TAGAAGCGTC           TTTTTGTTATTCCAT 100 33
 JI729_02130 NONE
 JI729_02135 NONE
 JI729_02140  455046 ..  455062 +  -7.3  -6.25578   AATGAGATAAAAAAA              CGATGAG TGA TTCATCG              TTTTTTTTATTTGGT  95 31
 JI729_02150 NONE
 JI729_02155  458215 ..  458251 + -10.4  -4.56597   TTAGTGATGAATTAA   TAG-GAAGAGTCGATTC TTAG GAATCGGCTCTTCATTA    TTTTTGGGAGGAGAG 100 26
 JI729_02160  458705 ..  458734 + -13.7  -3.12482   AAAGTAATTGAACGA       AAAAACAGGAGCC ACAA GGCTCCTGTTTTC        TATTCAATCGTCTTC 100 34
 JI729_02180  463733 ..  463785 + -14.8  -4.56367   TATCAGCAAATACCA TATTCGTATTAAATTAAAAAAGAGG CTAT CCTCTTTTTTAGTTTAATAC-AGTA TTTATTTATAAAATA 100 14
 JI729_02185  465936 ..  465954 +  -8.9   -4.5123   ATTTTTAATAAAAAA             GAGAAGC CAGCA GCTTCTC             TTTATTTAATCCGTT  88 33
        treR  468522 ..  468549 +   -10  -5.93809   CACGCAGGAAGTAAA        GAGGTGGAACAA AATA TTGTTTCATCTC         TTTTTTTTATAAAAA 100 27
        treP NONE
        treC  471767 ..  471793 + -15.3  -5.45802   TATACGAAATAAAAA         GGTTGTATGCC CGAGC GGCATACAACC         TTTTTATTTTAAGAC 100 29
 JI729_02225  476669 ..  476697 +  -7.7  -5.60993   ACATTTAGTTCAAAA        CAAAGTATATA AAACAAA TATATACTTTG        TTTTTTTATACAAAA  95 42
 JI729_02230  478291 ..  478310 +  -8.6  -5.93809   AATAGAAATGAAGAA            GCAAAGGG GAAA CTCTTTGC             TTTTTTTTATGGACA 100 44
 JI729_02235 NONE
        glnH  479993 ..  480014 + -13.1  -3.78934   AGATAGTAAAAGTGA           GAGGATGAG AGTA CTCATCCTC            TTCTTGTAAAGAAAG 100 39
 JI729_02245 NONE
 JI729_02250  481344 ..  481364 +  -6.2  -5.73672   TTAGAACTTCGTTGA            CTCTTACA ATATA TGTAAGGG            TTTTTTTCCTTGTTT  95 26
 JI729_02255 NONE
 JI729_02260 NONE
 JI729_02265  483848 ..  483891 + -11.2  -4.51763   GAAAATTCTAATATT AAAAAGCCCAGTTTCTCAGT TACA ATAGAGAAATTGGGCTTTTG TTTATTCTATTATTA 100 48
 JI729_02270 NONE
 JI729_02275  485947 ..  485983 + -15.3  -3.21354   CAATAGGAACAACAG    GACAAAGAAGCTGCTTA TAT TTAGCAGCTTCTTAGTC    TTCATACATATGTAA 100 46
 JI729_02285  487558 ..  487580 + -11.4  -4.57482   AAAGTGATAAAAAAA           CACGACTATT GAT GATAGTCGTG           TTTCTTTATGGATGG 100 34
 JI729_02300  491080 ..  491099 +  -7.9  -5.27335   AATGAAATGAGAAAA            GACGCTA CTGATA TAGCGTC             TTTTTCTTTAGGAAA  90 39
 JI729_02305  492676 ..  492693 +  -9.1  -4.41114   AATTGCTAGTTAAAA             GCCTCCT TTTT AGGGGGC              TTTATTATATAATAC 100 28
 JI729_02310  493178 ..  493198 + -10.5  -5.76633   ATAGAACGTAACGAA            GACCTTAGT ATA ACTGAGGTC            TTTTTTTATGTATAA 100 42
 JI729_02315  493531 ..  493588 +    -9  -5.13722   AGTAGGAACAGCAAT G-AA-AATAAAAATAGCTCTTAGCATGT ATGT AAATGCTAAGAGCTATTTTTATGCTTGC TTTTGTTTTACTGAC 100 75
 JI729_02325 NONE
 JI729_02330  497297 ..  497316 + -11.4   -5.1287   ACTCGTAATGAAGAA            GCATCGCC TTAT GGCGGTGC             TTTTTTGAGTATAAC 100 33
        rbsR NONE
        rbsK NONE
        rbsD  499680 ..  499691 +  -2.2  -3.68256   GCAAATGTAATTTTA                CATG CAGG CGTG                 ATTTTTTAATAAAGG  47 5
        rbsA NONE
        rbsC NONE
        rbsB NONE
         fsa  503776 ..  503802 + -10.3  -6.23545   ATAATAGAAAAGCAA         GAATCCTAGTT TAATT GACTAGGATTC         TTTTTTTTATTTAAA 100 37
        inhA  506559 ..  506584 + -12.7  -5.04601   GCTAATAACATAAAA         GCACATTCTTC ATAT GAAGAGTGTGC          TTTTTAATTTGTACA 100 36
 JI729_02375 NONE
 JI729_02380  507564 ..  507591 +  -8.5  -5.41359   ATGCATTTTAAAAAA        GACAACGATGG ATTATC CCATCATTGTC         TTTTTTACTTTGCTT  95 30
        bdhA  510025 ..  510056 + -16.8  -5.74122   ATAGAATCGAATAGA      GTAGCCCTTTTCTA GAAA TAGAAGAGGGCTAC       TTTTTTTCTATACTG 100 42
 JI729_02395  510467 ..  510492 + -13.5  -5.54192   TCGAATAGAAAAAAA         GAGTAAAGCAT TCAG ATGCTTTACTC          TTTTTTTACATTAGT 100 20
         plC  511590 ..  511618 +  -4.7  -4.89852   TAAGTATTTAAAAAA       GGTCAAAT-CTC AGAATA GAGTATTTGGCC        TTTTTATCACTATAC  72 38
         sph  512665 ..  512685 +  -8.4  -5.95539   AAGTAGTTTCAAAAA            GTTTCTTC GTAAA GAAGAAAC            TTTTTTTATTTGCAA 100 35
 JI729_02410 NONE
 JI729_02415  515319 ..  515342 + -12.6  -5.59357   TATGTATATGAAAAA          GCTGACAAAT AATT ATTTGTCAGC           TTTTTTTAGTGTAAT 100 105
 JI729_02425  516863 ..  516890 +  -7.1   -2.9248   TATGCATAAGAGAAG        CCCTCTTAC AGTATGAAAA GTAAGAGGG         TCCTTATCTCGTTAT  64 32
 JI729_02445  520864 ..  520890 + -10.3  -5.67967   TAAACTAACAAGTAA         TCCAACTTTAC AATAC GTAGAGTTGGA         TTTTTTTATAATAAT 100 33
 JI729_02450 NONE
 JI729_02455  521645 ..  521697 + -20.4  -2.85712   CTATACAGAAATAAA TTAGCTTAAAAAGAAACCTTCTTGC ACCG GCAAGAAGGTTTCTTTTCA-GCTAA TACTTGTACATATGA 100 17
 JI729_02460  522407 ..  522436 + -18.1   -5.2112   CGAAGAAGTAAAAAA       GAAGGTGAACTCT TTAA AGAGTTCACCTTC        TTTTTTACTAATGTT 100 30
 JI729_02465  523626 ..  523646 + -10.5   -5.1675   AAACAGCATAAAAAA            GATGAGGAG AAA TTCCTCATC            TTTTTTAATCCATCC 100 30
        brnQ  526597 ..  526622 +  -8.3  -5.20328   ATAACTGAGTAAAAA         GGTGTTTTCCG ATTT TGGAAGACGCC          TTTCTTTTTTTGGAA  93 33
 JI729_02480  528458 ..  528479 + -13.1  -5.74288   GAGAAGTGAGAAGAA           GGCAATCCA TGTA TGGATTGCC            TTTTTTATTATTTCT 100 32
 JI729_02495  533208 ..  533218 +  -6.8  -5.05601   AGAGGGCCTTCTTAT                 GGGA GGC TCCC                 TTTTTGTGTATAATA  83 53
 JI729_02500 NONE
 JI729_02505  534013 ..  534058 + -11.5  -4.83169   AAAAGAGAAGATTGA AATATAAGAAAGGCTTTCC-CG TAT TGAGGAAAGCTTTTCTTATATC TTTTTATACAAAACT 100 26
 JI729_02550  543421 ..  543449 + -11.9  -5.05505   CTATTTTATAATAAT        GAAAAAGTCATCT TTT GGATGGCTTTTTC        TTTTTAGTTTATCAT 100 30
 JI729_02555 NONE
 JI729_02560 NONE
 JI729_02565  546524 ..  546549 + -11.3  -5.46276   AGTTTTACTTTATTA         GAGCTATCTTT GAAA AGAGATAGCTC          TTTTTTGTATATATT 100 157
       gerLA NONE
       gerLB NONE
       gerLC NONE
 JI729_02585  550504 ..  550527 + -12.6  -3.72695   TGATGTGCAAAAAAA          GAAACCTGAA TAAT TTCAGGTTTC           TTTCGTGCAAAGCAT 100 13
 JI729_02605  554356 ..  554377 + -10.1  -3.36283   GTAATAAAATTTATG           GGGCTGGCT GCAA GGCCAGTCC            TGTTCATTTCAATTT  80 37
        pstC NONE
        pstA  556419 ..  556456 + -12.3  -4.23758   TATGAGTAGGTAGAG   AAAAAGGGTTATCTTTA TTCG TGAAGATAACCCTTTTC    TTTTAAATGTCAGGT 100 216
 JI729_02625  561724 ..  561744 + -11.3   -2.6836   CCTTTCTATGGAGAA            TTGATAAGC GCT GCTTATCAA            TAAGTTTCCGTGTTT  85 36
 JI729_02630  564834 ..  564846 +  -3.5  -2.54371   AAAAAACTTGTTGAC                TTTAA AAG TTAAA                TAAGTTAAAATGATT  44 79
         rrf NONE
 JI729_02640 NONE
 JI729_02645 NONE
 JI729_02650 NONE
 JI729_02655 NONE
 JI729_02660 NONE
 JI729_02665 NONE
 JI729_02670 NONE
 JI729_02675 NONE
 JI729_02680  565778 ..  565792 +  -4.2  -3.06315   GGGACCAGGGGGTCG               CAGGTT CAA ATCCTG               TCTTCCCGATATTCC  49 1
 JI729_02685 NONE
 JI729_02690  566035 ..  566045 +  -2.6  -4.90266   TTAGACATATAATAA                 TAAA ATA TTTA                 TTTTTCCTTCATGGA  64 57
 JI729_02695 NONE
 JI729_02700  566237 ..  566260 +  -2.2  -2.86343   AGGTTCAAATCCTGT          CCCCGCAACC AAAT GGTCCCGTGG           TGTAGTGGTTAACAT  40 15
 JI729_02705 NONE
 JI729_02710 NONE
 JI729_02715 NONE
 JI729_02720 NONE
 JI729_02725 NONE
 JI729_02730  566732 ..  566746 +  -3.5  -3.17688   TTCGAGTCCTACCTG              CGGAGC CATG GC-CCG               TTGGTCAAGTGGTTA  47 18
 JI729_02735  566822 ..  566842 + -14.1  -5.92399   GGGTCATACAAAAAA            GAGTCAGCA TTA TGCTGACTC            TTTTTTATTTTGTTA 100 32
 JI729_02740  567702 ..  567712 +  -5.4  -2.94329   GGCTGTACAGGGCGA                 TCCA AAT TGGA                 ATTTGGTTACAGATA  53 367
        tenA NONE
 JI729_02765 NONE
 JI729_02770 NONE
 JI729_02775 NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG NONE
        thiF NONE
        thiD  578937 ..  578954 +  -9.9  -5.88197   ATAGGTAAGTGAAAA             GCCAGTT TTAT AACTGGC              TTTTTTTCTGTTTAC 100 37
 JI729_02810 NONE
 JI729_02815  580315 ..  580339 + -13.7   -5.2189   TGTTGTTCATTTTTT          GAACACTGAGT AGA GCTCAGTGTTC          TTTTTTAATAATTAA 100 455
 JI729_02820  580488 ..  580502 +  -7.2  -3.30629   GTGAAAGAAGGAAAG               CAATCA TGA TGATTG               TCTTATCGGTTATTG  66 17
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC  584966 ..  585002 + -17.5  -3.60098   TTAATGAAATAGTAA    CAGTGCTACCTCAATCT AAT GGATTGAGGTAGCGTTG    TTTCGAATGAAAGGT 100 29
       kdpDN  586171 ..  586205 + -11.6  -3.49687   GCGGATCAAAGAGGG     TAAAATAGAGCCGACA TTT TGGGGGCTCTATTTTA     ATTTTTGTACAGCAT  93 23
 JI729_02855 NONE
 JI729_02860  588971 ..  588998 + -13.5  -5.82172   CAAAAATAAGTACTA        GGCTGCGGAGA TGGAGT TCTCTGCAGCC         TTTTTTTGTATTGCT 100 32
 JI729_02865  589601 ..  589625 + -10.8  -3.90744   ATATTTAGATAAGGA          GAAGGGGATG TTCAT CATCTCCTTC          TTATTTAAAAGGAGC  95 67
 JI729_02870 NONE
 JI729_02875 NONE
 JI729_02880 NONE
 JI729_02885  592916 ..  592942 +   -16  -5.23316   TGTTGTAAAAGAAAA         GTAGAGCATCGG ATT TCGATGCTCTAC         TTTTTTAATGTGGTA 100 92
 JI729_02895 NONE
 JI729_02900  596148 ..  596170 + -10.6   -4.1523   CAATGTTCCGTAATG           GCTACCGTAT TAT AGACGGTAGC           TTATTTATACTTGGA  95 28
 JI729_02905  596498 ..  596531 + -12.7  -3.14693   TTTTGGAGGGGAATG     TAAAAAAGCATACGA TTAA TCGTATGCTTTTATA      TCTGTTAATGATGGA 100 23
 JI729_02975  609075 ..  609100 +  -6.1  -5.19328   AAGGTTAATAGATGA         GACATTCTCGT TTTT GCGGGGGTGTC          TTTTTATTATGCAAT  82 33
       spoVR  610604 ..  610631 +   -15  -5.64421   TATGTGTGAGGGGAA        GAACGGACATAG GATA CTGTGTCCGTTC         TTTTTTATTTAAAAT 100 32
 JI729_02985  612034 ..  612076 +   -24  -4.07568   GTGTGATTTTGTTAA GTCAACGTAATTAATAATGA TTA TCATTATTAATTACGTTGAC TTTTAAAAAAAGAAA 100 83
 JI729_02990 NONE
 JI729_02995  613661 ..  613682 +  -8.1  -5.38047   GAACTATACGTAAAA           GAACTTGGA GATA TCTAAGTTC            TTTTTTATCTCGCTA  95 212
         cdr  615728 ..  615741 +  -6.7   -2.7924   TAGGGGTTTACAAAA               TACCC TATA GGGTA                TAATATATTGTCATA  60 141
 JI729_03005  616062 ..  616086 +  -6.6   -4.0896   GTAAAAAGCCGATAA         TCTGTCAGACA TAAT TGT-TGACAGA          TTTTCAAAAACATTT  72 26
 JI729_03010 NONE
 JI729_03015 NONE
 JI729_03020  618132 ..  618145 +  -3.9  -3.31144   AATTAAAGTTCTGGA               TTAAG AAAG CTTAA                TTATAAAAATAGGAG  49 12
 JI729_03025  618409 ..  618435 +  -5.2  -3.63515   ATAGCGGTTCAATAA         TAAGTGGAAGAT TAC ATCCTCTGCTTA         TTATTGAAAGTAAAG  59 37
 JI729_03030 NONE
 JI729_03035 NONE
 JI729_03040 NONE
 JI729_03045 NONE
 JI729_03050  620852 ..  620886 + -15.3  -4.23213   GATATGCTATCAAAA    TAAAAGGATGGTGCTG CTTA CAGC-CCATCCTTTTA     TTTATTACCTGTAAA 100 23
 JI729_03065  624037 ..  624058 + -10.2  -4.53419   ATGAAATGAAAAAAA           GAGACGCT TAATGT AGCGTCTC            TTTCTTATTATAATG 100 37
 JI729_03080  628695 ..  628728 + -12.5  -3.07198   TAGAGAGAATATAAA     GGGGAAAAACTACTG ATTT CAGCAGCTTTTCCCC      CTTTATATATAAAGA 100 38
 JI729_03085  630715 ..  630734 + -10.8   -5.5762   AAAAGTATATAAAAA            CTTCCGTT ACAT AACGGAAG             TTTTTTATGTTTAAT 100 41
 JI729_03090  631125 ..  631137 +  -2.7  -3.54048   GAAGAGAAAGTGACG                GTATA AGA TGTAC                ATTTTATTATGTTGT  46 20
 JI729_03095  631461 ..  631474 +  -2.5  -3.78992   TTTTAAATATAAACA               TTATA ATGT TATAA                CTTTTTATTCTTATG  50 49
 JI729_03100 NONE
 JI729_03105 NONE
 JI729_03110  634169 ..  634188 + -12.2  -5.47159   TAGAGAAGAGAAGGA            GAGGATGC TGTG GCATCCTC             TTTTTTCTGTTGAAA 100 38
 JI729_03115  635203 ..  635230 +  -8.4   -5.1675   AGAATCATAAAAAAA        GAGCCAGCCTCA ACGA TGAGACTGACTC         TTTTTTACTAACTAG  93 40
 JI729_03140  640957 ..  640979 +  -7.8  -5.56264   CATGCGCATAAAGAA           TCACTAGG ATCATGA CCTAGTGA           TTTTTTGTCTTTAAA  95 11
 JI729_03145 NONE
 JI729_03150  642945 ..  642973 + -16.9  -5.28281   TGTGAAGAGAAAGAA        GAAGCAAGCATGG ATT TCATGCTTGCTTC        TTTTCTTTATTTTGT 100 36
 JI729_03175 NONE
 JI729_03180  646839 ..  646876 + -10.8   -5.2894   ATGTAATCCGCTTTA   AAGAAAAAGAGGTCAA TTTTAT TTGGCCTCTTTTTCTG    TTTTATTTTCTCTTT 100 25
 JI729_03190 NONE
 JI729_03195 NONE
 JI729_03200 NONE
 JI729_03205  649725 ..  649783 + -21.7  -4.07687   TGTATTACTGTACGT TATCCGATTTCATAAAAAAAGCATACCG TAAA TGGTATGCTTTTTTTATGAAATTGG-TA TTTTAGAAGCGACGT 100 11
 JI729_03215  653039 ..  653060 +  -8.1  -5.58179   TAAGAGAGAAGAAAA           GAAGCTTAT CATG ATAGGCTTC            TTTTTTGTTATACTA  95 38
 JI729_03220 NONE
 JI729_03225  653479 ..  653526 + -10.7  -5.49569   CGAAAAAATATAATA GTACAGAAAGATAGCTCGCCG TTTTAT CGGCGAGCTATTTTGTTATGC TTTTTTCTGTTCATC 100 12
 JI729_03235  656315 ..  656339 + -10.1  -5.84381   TTGTATAGAGAGGAA          GAGCTTATCTG ATG TAGGTAAGCTC          TTTTTTTATTCCTAA 100 33
 JI729_03240 NONE
 JI729_03245  657647 ..  657662 +  -7.6  -5.61596   TAAAGTAGAAGAAAA              GATGAG GAGA CTCATC               TTTTTTTATCCCCCT  95 33
        murQ NONE
 JI729_03255  660223 ..  660242 + -10.8   -5.1244   GGCAGAAAACATATA            GAGAAAGG GATT CCTTTCTC             TTTTTCTATTAATAG 100 25
 JI729_03260  661368 ..  661390 + -13.6  -5.95449   TATTTTGTAAGAAAA           CATTATCCGT AAA ACGGATAATG           TTTTTTGTTTTCTTT 100 57
 JI729_03265  661999 ..  662021 +  -9.3  -3.49475   TATTTTTTTACACAA           GATGTAACT ATAAA AGTTACATC           TTGTGTAAAAATAAA  79 123
 JI729_03270 NONE
 JI729_03275  662945 ..  662967 +  -6.2  -5.26875   AAGAGAAAATAAAAA           CATCGCCAAC CCA GATGACGATG           TTTTTTCATTAAGAA  82 29
 JI729_03285  664573 ..  664596 +  -3.9  -5.76237   ATACGAGATGAGGAA          CCGAGC-ATC GATTA GATTGCTTGG          TTTTTTGTTTGTATA  85 11
 JI729_03290  665190 ..  665222 +  -9.4  -2.56124   ATTTATAGAGAAAAA     GTTCCCACTATTATT TACA GATA-TAGTGGGAAC      ATGTATTTACATAAG  73 44
 JI729_03300  666590 ..  666611 +  -8.7  -2.52676   GGCAAATAAAAAAGA           GCAGGTAGC AAAA GCTAACTGC            TCCATTCAAGGGATC  70 99
 JI729_03305 NONE
 JI729_03310  667611 ..  667633 +  -9.3  -4.77165   TATATTGTATTTTTA           TCTCCTAAT TGTTT ATTAGGAGA           TTTTATTATAAAAAA 100 44
 JI729_03315  668328 ..  668353 +  -9.1  -4.56775   AAAGAAATAGTGAGA         TGAACCTGTCT GAAA AGGTAGGTTCA          TTTTTGAGGAAAACT 100 31
 JI729_03320  669742 ..  669761 + -12.2  -5.56263   TGCGAAGTAATAAAA            CCCCTTAC GACG GTAAGGGG             TTTTTGTTTTATCCT 100 31
 JI729_03330 NONE
 JI729_03335  671430 ..  671464 + -11.6   -4.4767   TAAATAATAGTATGT     GAAGAAGGTACTAC TAAGGAT GTAGTACCTTCTCC     TTTTATAATGACTCA 100 34
 JI729_03370 NONE
 JI729_03375  679636 ..  679663 + -12.2  -4.87786   TATTTATATAGAAAA        GAAGGTGATTTA TAAA TAGATCACCTTC         TTTTTATAAGATTAA 100 66
 JI729_03385 NONE
 JI729_03390  685475 ..  685497 + -13.6  -5.53991   AATAGGTAAGGTGGA           GAACTTGTGA TTT TCACAAGTTC           TTTTTTTAGTGAATC 100 39
 JI729_03395 NONE
 JI729_03400  687216 ..  687233 +  -2.7  -5.69262   CTACACATTAAAATA             ATCCTTT TACA AAAGGAG              TTTTTGTTTTTATGA  81 25
 JI729_03405  687989 ..  688014 + -17.7  -4.65838   CAATAAATTAAGGAA         GGTCTCAAGGC ATAT GCCTTGAGACC          TTTTTGCCATATATA 100 35
 JI729_03415  688945 ..  688970 +  -9.1  -5.71295   TGTGTAAATAGAAAA         CTTCCACCT TATTATCT AGGTGGAAG          TTTTTGTTTTTGTAT 100 34
 JI729_03430 NONE
 JI729_03435  693260 ..  693279 + -13.6  -5.18715   AGCGTAATAGTGGAA            GACGCTCC TAGG GGAGCGTC             TTTTGTTGTTTTTAT 100 34
 JI729_03440  693984 ..  694033 +  -2.6  -4.09348   TATATTTTTATGGGG GTTCTA-ATTTTTTAGAAGTA TGCTTAATT TACTTTTGAAAAATATAGAGC TATTTTTAATGTTTT  53 123
 JI729_03445 NONE
 JI729_03450  697493 ..  697524 + -10.3   -5.7946   AAATATTTGATAAGA      GGTTCTTTTCCAA TTTCGT TTGGGAAGGAACC       TTTTTTTGTTAGCAA 100 77
 JI729_03455 NONE
 JI729_03460 NONE
 JI729_03465 NONE
 JI729_03470  702400 ..  702438 + -12.8  -3.07466   ATCATATAGGGCATA   GAAAGAGATAAGGATA GATTTAA TATCTTTATCTCTTTC   GTTTGTATATCAAAT 100 60
 JI729_03475  703551 ..  703582 + -12.6    -5.626   AAGATGATAGCATGA      TACAAAACACTGTT AAGA AATAGTGTTTTGTA       TTTTTTTATAAAGTA 100 73
 JI729_03480  704369 ..  704387 + -10.2  -5.60993   TGTTGTTTTTGCTTG             GGCCTCCT TTA AGGTGGCC             TTTTTTTATGGGAAA 100 405
        alsS NONE
        alsD  708559 ..  708587 + -19.1   -5.0065   TGCGGAGTAAAAGGA        GAAGACTGTTCCA TTT TGGAACAGTCTTC        TTTTATTTGTCGGTA 100 31
 JI729_03510  710249 ..  710266 +  -7.7  -5.80364   ACGATGAAAGAAAAA             CGTAGCT TTTT GGCTACG              TTTTTTTGTTGAGCT 100 34
 JI729_03515  714719 ..  714748 + -18.1  -4.19817   AAAAGATGTATAAAA       GGCATCAGAGATT ATAC AATCTCTGATGCC        TTTTAAGTGAATACA 100 39
 JI729_03525  718253 ..  718279 +   -16  -4.91511   TTGCATAAGAAGAAA         GAGGTTGTTCCG AGT TGGAACAACCTC         TTTTTATCCTGCAGT 100 33
 JI729_03530  720140 ..  720188 + -20.8  -3.01712   AAAGGTGCGAAAAAA TAG-AAAATGAAGGATGCCCCAT ATCT ATGGGGTATCCTTCATTTTTCTA TATTAAACAGAAGAA 100 23
 JI729_03545  723155 ..  723198 +  -8.4  -5.02201   AGATAGTAATTAGAA TATCTCACAATTTTACATAA ATTA TAATGTAGAGTTGTGGGATG TTTTTATAATGTTTT  93 39
 JI729_03550 NONE
        csaB  726208 ..  726234 +  -6.7  -5.40279   GATCATATGGAAAAA         GGCACTTTATT AAAAA AGTAAAGTGTC         TTTTATTTTGTTTTG  89 5
 JI729_03560  728250 ..  728280 + -13.5  -5.52096   TAATTAAATAAAAAA      GAAGGTGCTACTGA CATT TC-GTAGCACCTTC       TTTTTTATTCAATTT 100 38
 JI729_03570  730850 ..  730883 + -11.2  -5.76949   GATAAAGGGGAGAAA     GTGCTAACACATTT TAGTAT AATTGTGTTAGCAC      TTTTTTTTAGGAGTA 100 82
 JI729_03575 NONE
 JI729_03580  731578 ..  731604 + -18.2  -4.45738   AGTTTTATAGGAAAA         GCATAGCGTTAC TGA GTAACGCTATGC         TTTCTTGTTGCAATG 100 39
 JI729_03590  732954 ..  732994 + -13.7  -3.53343   TAATTTCATAGATAA  TAGAGAGCTGATTAAAGAT ATT ATTTTTAATCAGCTTTTTA  TTTGGCAAAGCGATT 100 38
 JI729_03595  734933 ..  734984 + -22.2  -4.50993   AACGTGTCTTCTTTC CGTTAATAAATAATAAGAGATTGCC ATT GGCAGTCTCTT-TTATTTATTAACG TTTCTCTTTATTTCC 100 20
 JI729_03600  736054 ..  736073 + -13.6   -5.7827   TGAATAAGAAAGAAA            GGTCACCC GTTT GGGTGACC             TTTTTTGTTTGTATT 100 34
 JI729_03610 NONE
 JI729_03615  738825 ..  738853 + -19.1  -4.66833   TGGTGTATGAAAAAA        GCTGTACCTCTAA TAA TTAGAGGTACAGC        TTTTTACCATTCACG 100 161
 JI729_03625  741264 ..  741285 +  -9.5  -3.75153   ATAAGAAACAATAAA           GAAGCTGGT GGAA ATCAGCTTC            TTTAGCTTGAGGGGG  84 37
 JI729_03630 NONE
 JI729_03635 NONE
 JI729_03640 NONE
 JI729_03645  745107 ..  745127 +    -9  -5.63517   TGTTTTAGAGGGAGA            GCACTAGG GGGGA CCTGGTGC            TTTTTTCTTTGCAGG 100 33
 JI729_03650  745402 ..  745428 + -13.1  -3.85567   GAAGCTATGAAAAAA        CGGCAAGCGGAG TATA CTC-GCTTGCCG         TTTCCATTTCCAGTT 100 31
 JI729_03660  747282 ..  747297 +    -9   -5.7946   GTGTTTATTTATTAA              GAGGAG ATGG CTCCTC               TTTTTTTGTTACAAG 100 40
 JI729_03665  748566 ..  748608 +  -8.6  -3.89215   GTCCGATTGGTTCAA CTAATAATCAGTGGGGGAT GAACAA AACCCCCACTGATTAA-AG TTTCACTTTATCGGA  82 236
 JI729_03670 NONE
 JI729_03675  749982 ..  749996 +  -6.4  -3.68445   CTGACATTACATTTT               GGGGAA GGT TTCTCC               TTCTTCAAGCTTTTT  64 108
 JI729_03680  750645 ..  750678 + -13.3  -5.50723   ATTTAGATAAGTAAA     GGAGATGTCCTAG TACCATGC CTGGGACATCTCC      TTTTTGTTTTAATGA 100 95
 JI729_03705  756458 ..  756502 + -22.4  -5.66338   TTATTTTTTACGAAA CCCACCCTTTTGCTTCCGACG GCGA CGA-GGAAGCAAAAGGGTGGG TTTTTTGTTATCTTT 100 58
 JI729_03715 NONE
 JI729_03720  757898 ..  757911 +  -3.9  -2.75992   AAGTAAGAAAAAGTT               GAATA TTAA TATTC                TAATATTCAATAGAA  45 24
 JI729_03725  758352 ..  758391 +   -19  -3.05715   TATATAACAGGCATT  TCAAATGAGCCATACAGCT TAT AG-TGTATGGCTCATTTGA  TTGCATGCCCAACTT 100 55
 JI729_03730 NONE
 JI729_03735 NONE
 JI729_03740 NONE
 JI729_03745  761289 ..  761305 +  -2.2  -3.07501   AGCGTTAAAAATAAC              CCTTCT TTAAT AGGGGG              TATTAAAAATTATGT  42 16
 JI729_03750  761827 ..  761849 +  -7.1  -5.22312   ATCATGAGTAAAAAA           GCTTATGTA TAACC TGCATAAGC           TTTTTTAATGTCCAT  86 86
 JI729_03760  763038 ..  763052 +  -7.2  -2.92613   GGTTTGCTGCTAATT               TGCAAT GTT ATTGCA               TACTTTACAGTAGAG  64 163
 JI729_03765 NONE
 JI729_03770 NONE
 JI729_03775  763947 ..  763999 +  -9.8  -4.94992   ATAATTTGAAATTTA TAACTATAATAAAACATATATATCT TAAT GGATATA-ATTTTTTATTATAGTTA TTTTTATAAGTTTAA 100 40
 JI729_03780  764458 ..  764497 +   -11  -3.94404   GAAAAATAGTTTTTG  GATTGAAAAAAGCATCTA AAGA TAGAAGCTTTTTTTAGTC   TTTAATTAAATAGTT  95 32
 JI729_03790  765707 ..  765719 +  -4.1  -4.32607   GTAGAACACATGAAA                CCTTT TAA AGAGG                TTTATTGAATTTTAA  61 18
 JI729_03800  766046 ..  766079 +   -17  -3.91412   TATGTGATAAAGAAA     TTCCCCTCTAAATC CTTAAC GATTTAGAGGGGAA      TTTCTACAATATGAT 100 48
 JI729_03810 NONE
 JI729_03815 NONE
 JI729_03820 NONE
 JI729_03825  768357 ..  768381 +  -3.6   -4.9181   GAGTAACAAAAGTAA          GAATTATGTG AATTA CGCATAAGTC          TTTTTAATATTATCT  68 142
 JI729_03835  769377 ..  769387 +  -3.2  -4.12279   GGGTATGGTTATAGA                 TTCC GCA GGAG                 TTTCATTTAAGTTTG  55 243
 JI729_03840  770474 ..  770490 +  -4.5  -3.46271   GGAAATTAAGTTTGT              TCTTATT AAT GATAAGA              TTATAGCTGTTTATC  55 163
 JI729_03845  771497 ..  771509 +  -4.7  -4.28653   ATGATCAAATTGATC                GCCCG TTA CGGCC                TGTTTTTCTTATTAT  64 153
 JI729_03855  772210 ..  772235 + -12.1  -5.33785   TATGTTTATAAAAAA         GACCTTTTATT TTAA AATAAAAGGTC          TTTTTTATGATGATT 100 47
 JI729_03870 NONE
 JI729_03875 NONE
 JI729_03880 NONE
 JI729_03885  778399 ..  778414 +  -2.6  -5.66684   ATTGATATCTGCTTT              TTATCA TGAA TGGTAA               TTTTTTTATAAATTA  81 220
         dcm  781472 ..  781492 +  -9.1  -5.55769   TAAATGAGGAAAGGG            GTATAGTGA ATT TCACTATGC            TTTTTTCTTGTAAAG 100 41
 JI729_03915  784044 ..  784090 + -15.6  -5.48213   AAGACATATAAAAAG GTTTATACACCTGTTTCTTA GGGAATA TAAGAGATAGGTGTATAAAC TTTTTATTTTAACTA 100 196
 JI729_03930 NONE
 JI729_03935 NONE
        dnaB  789490 ..  789504 +  -2.2  -2.78463   CCAAAGTTGTAACGC               TAATTT CAT AAGTTA               TATAATAAAGAAAAT  40 82
 JI729_03945  790464 ..  790491 + -15.8  -4.82901   AAATTTATATAAAAA        TAGCCGACTATT ACAT AATAGTCGGCTA         TTTTTATAAGGGGAA 100 92
 JI729_03955  792737 ..  792747 +  -3.2  -3.34344   TGTAGGCGTCGTATA                 TTGC TGG GCGA                 TTACTTGCACGATGA  48 393
 JI729_03970  796805 ..  796825 +  -8.3  -2.75481   TAAAAGTAATAATCA            TTGGGGG AAGAACA CCCCCAA            TGATTAAAGTTCCAC  68 116
 JI729_03975  798367 ..  798383 +  -2.2  -5.76633   AATGGTGATAGAAAA              GCCC GGTTTAGAA GGGC              TTTTTTTCTATGTAA  80 99
 JI729_03980  798713 ..  798736 + -10.4  -5.24796   ACGGTAGCAGTTAAG          GAAGAGATGT TAGC GCATCTCTTC           TTTTTATTATATGCC 100 66
 JI729_03990  801211 ..  801235 + -10.2  -5.30448   GATTTAAATAAAAAA          GACATCTTTA AGAGG TAAAGATGTC          TTTTTATATTTCTTT 100 41
 JI729_04000  802301 ..  802326 + -14.9  -4.13767   TCTGATATAAAGAAA         GCCTCAAGTAT TCAT ATACTTGAGGC          TTTTCCAATGGAAAG 100 52
 JI729_04005  802833 ..  802861 + -14.8  -3.73224   TGCTAAAAACTATTG        GAAAAGACACTC ATATG GAGTGTCTTTTC        TTTCGTGCAAAATGA 100 35
 JI729_04010  803544 ..  803569 + -10.5  -5.28176   TATGTAAATACGAAA         CCCCTTCAG CAAGTAAA CTGAAGGGG          TTTTTTCTAGATACA 100 68
 JI729_04015  804038 ..  804070 + -10.8  -4.77165   TTTATGTTTTCTTTG      GATGAGTATCTC GATAGTGAG GAGATACTCATC      TTTTCTTATGAGGGA 100 41
 JI729_04030  806261 ..  806280 +  -5.1  -3.60814   AAAGAAAAGAAAAAA            GAATAGT CTCTGC ACTATTC             TTGTCTATCCCATTT  59 20
 JI729_04035  806720 ..  806739 +  -6.5  -4.41422   AAGGAAAAGAAACAA            GAGTAGT CTTTGC ACTACTC             TTATTTTCTGTATCC  74 20
 JI729_04040  807178 ..  807204 + -10.3  -5.55769   GAGAAGGAAAAGAAA         CAAGAGTAGTC TTTGT GATTACTCTTG         TTTTTTATTATAGAA 100 17
 JI729_04045  807709 ..  807732 +  -7.6  -6.01369   ATACATAATAAAAAA          CAGTAGTG-AT TTT ATACACTACTG          TTTTTTTATTGTTTC 100 118
 JI729_04055  809347 ..  809370 +  -8.9  -4.72272   GCAAAATCAAAAAAG          GCCTACCTA GGAAAA TAGGTGGGC           TTTTTAATGCAGAAA  91 130
 JI729_04070  811728 ..  811771 + -14.1  -4.12405   AATGAGTAGAAAAAA CAAGGCTTTTACTTCGTGG ATACCA CTACAAAGTAAGAGCCTTG TTTCATTATATTTGT 100 259
 JI729_04095  814234 ..  814253 +  -6.5  -4.41422   AAGGAAAAGAAACAA            GAGTAGT CTTTGC ACTACTC             TTATTTTCTGTATCC  74 20
 JI729_04100  814692 ..  814717 +    -7  -3.37466   GAGAAGGAAAAGAAA         CAAGAGTAGT CTTTGT ACTATTCTTG          TCTTCTCTATCCCAT  64 17
 JI729_04105  815155 ..  815174 +  -6.5  -4.41422   AAAGAAAAAAAACAA            GAGTAGT CTTTGC ACTACTC             TTATTTTCTGTATCC  74 20
 JI729_04110  815611 ..  815639 + -12.6    -4.053   AGAGAAAGAAAAAAA        CCAAGAGTAGTT CTTGC GACTACTCTTGG        TTTCTGTACCCTACT 100 16
 JI729_04115  816073 ..  816107 + -14.6  -4.31433   AGAAGAGAAGGAAAA     GAAACAAGAGTAGT CTCTTTA ACTACTCTTGTTTC     TTTATTCTAGGGGTA 100 13
 JI729_04125  818218 ..  818261 +   -15  -3.36749   GTTTAACCGCATCAA TAAAGGGTGGTACAAACATAT GTA ATA-GTTTGTATCACCCTTTG TTGATGTTAGAAGTC 100 1
 JI729_04135 NONE
 JI729_04140  820975 ..  820996 +    -3  -3.53444   AATACCGTAAACCAA           GAACTTGA CTGAAT TCACGTTC            TTTAACAAAAGATAG  48 14
 JI729_04145  821906 ..  821927 + -11.7  -5.86976   TAATCATTATCAGGA           GAATCTGCA GATT TGCAGATTC            TTTTTTATTTTATCG 100 207
 JI729_04150  822917 ..  822930 +  -2.5  -2.81208   AGAAGCTTATCAATT               TTTAA TGTA TTAAA                CTATTTTGAATAACA  41 82
 JI729_04155  823899 ..  823928 + -13.7  -5.95166   GAAATGTAATGATGT       AAATCAGCTGTCC ATAT GGACAGCTGATTA        TTTTTTTTGCTTAGC 100 47
 JI729_04165  825042 ..  825069 +  -5.7  -5.49569   ATGATAAGTAAAAAA        GTACAGTCT GCTGTAGAAA AGACTGTAC         TTTTTTATGTTAGTA  85 56
 JI729_04180 NONE
        pssA NONE
 JI729_04190  828189 ..  828234 + -16.6  -4.41177   ATGAGAAGGGATAGA TGAGTAAACTCTCAAGTATA GAATGA TATACTTAAGAGTTTACTCA TTTTAAATTTATCTA 100 27
 JI729_04195  829292 ..  829306 +  -2.2  -4.83269   TTATATTTACCCCAC               TTTTTA TTT TAAAAG               TTTTTCCTATCCTAT  61 183
 JI729_04200  830184 ..  830209 + -10.6  -4.49311   TTCAATTTGTAAAAA         GCCTTTAACT TGTTAT AGTTAAAGGC          TTTTATCATCATAAT 100 78
        dhaK  833751 ..  833786 + -13.4  -3.09823   TTTGAAATAGTAATT    GGAAAGTCCCTCTGCC TTAA GGTGGAGGGATTTTTC     TGTAGTTTTCGAGAA 100 31
 JI729_04220  834988 ..  834998 +  -5.4  -3.90843   CGTAGATAGTAGCAC                 GAAC ACT GTTC                 TTGTTATAATTAATT  63 66
 JI729_04235  838360 ..  838383 +   -11  -4.79657   TAGAAATTAGAAGAT          CCCTTCTACC TTAA GGTGGAGGGG           TTTTCTTAATATTAT 100 227
 JI729_04245  842615 ..  842631 +  -7.3  -5.94214   TAAGAATGAGAAAAA              GCATCTG TTT TAGATGC              TTTTTTTATTGTATT  95 38
 JI729_04250  842968 ..  843016 + -13.5  -3.39749   CGAAGAATAAGCAAG GGTAAAACAAAAACGCTATCTTT TAA AAAGGTAGCGTTTTTGTTTTGGG TTATAAAGTTATTCC 100 21
 JI729_04255 NONE
 JI729_04260  844078 ..  844101 +  -6.8  -5.59564   ATGATAGGAGAAATC          CCCTTAAAAT AGAT GTTTTGAGGG           TTTTTTTGAATTTGT  90 37
 JI729_04280  847435 ..  847451 +  -9.5  -5.54192   ATGATTAAAAAAAGA              GTAGGAT GTA ATCCTAC              TTTTTTTACGTTAAT 100 67
 JI729_04290 NONE
 JI729_04295  848798 ..  848818 +  -6.2  -3.18582   ATATATGTTCATCAA            GCTTTGGT TACAT ACTAAAGC            TTGATGAATCCAATA  60 40
 JI729_04300  849189 ..  849211 +   -10  -5.74122   ATATACATAAAAAAG           CATCCGATTA AAA TAATTGGATG           TTTTTTTATGTAATC 100 104
 JI729_04305  850908 ..  850938 +  -5.5  -2.59133   GTCGAAACGTTAGAA      ACCCCCACTTCAAGC TTT GCT--AAGTGGGGGA      GTGTTCATTATGTAT  54 41
        rsbV NONE
        rsbW NONE
        sigB NONE
 JI729_04330  853436 ..  853493 + -12.5  -3.27408   AATTAAAAGTAGAAA TTTATAGAGTGAAAGAACAAATTCCTA TTTC TAGGGGTTTGTTCTTTTGTTGTATAAA TATGTTTGAGTAAGA 100 35
 JI729_04335  854740 ..  854781 + -16.2  -4.20875   AAACGAATGCGAAAT AAAAAGCGTATGAAATCC AAATAA GGATTTCATACGCTTTTA  TTGTATTTTTTGATA 100 24
 JI729_04355 NONE
 JI729_04360  859743 ..  859757 +  -2.9  -3.58343   GATTTCTTTAAATAA               TATGT ACGTC ACATA               TTTAAACATAATGAA  48 26
 JI729_04365 NONE
 JI729_04370  860550 ..  860577 +  -4.8  -5.77734   ATAAAAAACAGGCTC        ACCCCTTGAAGT TTAT GCTTTGAGGGGG         TTTTTATTTTTCTTT  90 45
 JI729_04375  861511 ..  861533 +  -9.3  -3.77196   TATTTAAAAGGTAAA           TGCAAAAGA CTTCT TCTTTTGCA           TTTAATAACTCGTCA  84 521
 JI729_04395  865611 ..  865655 +  -9.6  -5.42265   TGAAACTAATAAAAA CACCTCCATTTAATTTGCATAC TTA GTATGCGAATTT-A-GGAGGTG TTTTTTATCATTTAC 100 57
 JI729_04405  866363 ..  866379 +    -8  -5.42259   TAGTAGAGTGAAAAA              GAAGCG GATGA CGCTTC              TTTTTTTAGCGCTGG  95 30
 JI729_04415 NONE
 JI729_04420 NONE
        yhaM  872025 ..  872055 + -11.2  -3.74238   TTATTAAAAAGCTAA       GAGCCTTACTACAT TCT ACGTAGCAAGGCTC       TTTAAAGTTGTTTCA  95 123
 JI729_04430  873921 ..  873961 +  -9.2  -3.93262   TCCGATTGGTGAGGG CTGATAATCAGTGGGGG GAAGAAAA CCCCCACTGATTAA-AG  TTTCACTTTATTAAA  86 178
 JI729_04435  874893 ..  874908 +  -4.8  -4.73828   AAAGAGTAAGACTAG              CAATTA ATAT TAATTG               TTCTTTTTTCATTAT  74 209
 JI729_04445 NONE
 JI729_04450  877517 ..  877551 + -15.2  -5.73978   ATAGTAAGTAGGAGA     GCAAGTAGTTTTAGCG GAG TGCTGGAACTACTTGC     TTTTTTATTTATCCT 100 49
 JI729_04455 NONE
 JI729_04460  879063 ..  879083 + -14.1  -5.28983   ATAATAACAAAGAAA            GGGACTTCA ACA TGAAGTCCC            TTTTTCTATTTTCAG 100 37
 JI729_04465 NONE
 JI729_04470  880459 ..  880495 +  -4.3  -5.88565   TAGAAATTTTGAAAG    GTTACCACCTAGTAGGA TTT TACATCTCGGTGGTAGC    TTTTTTTCTTCTGCG  89 41
 JI729_04475  881547 ..  881572 +  -9.9  -5.04733   TTTACTTTCGATTGA         GAAGTTAACAA TTTA TTGTTAGCTTC          TTTTCTTTGTGATTA 100 61
 JI729_04480  882596 ..  882617 +  -5.2  -5.57396   ATAATTGGTGAAAAA           CTCTGTAA TAAATT TTACAGGG            TTTTTTGTTAGTTCT  86 171
 JI729_04485  884119 ..  884132 +  -5.3  -3.16218   TTTTTTATGCCTAAT               CTAGT CTTA ACTAG                TATCTGTTCGTTGTA  54 93
        glpP  885510 ..  885566 +  -3.5  -5.45802   ACGGAGAAAAGTAGA GATCCACA-TTT-CATTGTTTCTATATA AATT TATATAGAAGC-GTGCAAGCTGTGGGTC TTTTTCTTTTGACAA  76 112
        glpF NONE
        glpK  888029 ..  888079 + -11.5  -5.32944   GGTAGGAGATTTGGA GAGACCAC-AACGC-GCTATAGA GGCGAAA TCTATAGCGGAGTTTGTGGTCTC TTTTTTCGTTATCAA 100 79
        glpD  889798 ..  889829 + -18.2    -5.626   TTAGCATAAAATAGA      GAACCACCTGAAGG GGAG CCTTTAGGTGGTTC       TTTTTTTATGGAATA 100 32
 JI729_04515 NONE
 JI729_04520  891240 ..  891266 +   -16  -5.10767   GCGTAAAATAGAGAA         CTACCTGAAGGG GAG CCCTTTAGGTAG         TTTTTCTCTTGACTA 100 258
 JI729_04530 NONE
 JI729_04535 NONE
 JI729_04540  894494 ..  894516 + -10.7  -5.20783   AAATAGATAGTAGAA           GAGGGTTAT CATAA ATAACCCTC           TTTTTGTGTTTAAAT 100 95
 JI729_04550  895718 ..  895762 + -13.2  -4.41353   AAATGATAAAAAGAA CACCTCCATTGAATTTGCATAC TTA GTATGCGAATTCG--GGAGGTG TTTTAATATGTGTCC 100 39
 JI729_04570  900663 ..  900673 +  -3.2  -3.17075   ACTGAATTATTTTCA                 GGGT CAT ACTC                 TTCCATTAAGCGAAG  47 221
        ecsA NONE
        ecsB  904795 ..  904805 +  -2.4  -2.84878   CCAATACGGGGCCAA                 GCGC ATT GAGC                 GTTTAAATTGAAAGG  40 4
        ecsC  905543 ..  905571 + -17.6  -4.63218   TAGGGATTAAAACAA        GGCGTCCTACAT GTGTA ATGTAGGACGCC        TTTTCTTAGAAGCCA 100 31
 JI729_04610 NONE
 JI729_04615 NONE
 JI729_04620 NONE
 JI729_04625  908637 ..  908660 +  -7.4  -5.55769   AATTAACCAGAGAAA          GCTTGCCTAT TATG AAGGGCAAGC           TTTTTTGTTATAGGG  90 35
 JI729_04630  909595 ..  909618 + -11.1  -4.92669   TATATAGAAATGCTT          CCCTCTATG TTTTAT CATAGAGGG           TTATTTTTTTATGTG 100 155
 JI729_04635  910235 ..  910266 +  -6.1  -5.68438   ATTTGTTAAGTAAAA      TGTTATTACTC AATTCAATGG GAGTAATAACA       TTTTTTATTTAGTGC  95 145
 JI729_04640  911351 ..  911389 + -15.5   -5.9218   CATATTGGTTACTAA  GATCGTCTGGTTGCA-CA TTTT TGATGCAACCGGACGGTC   TTTTTTTGTTATATA 100 273
 JI729_04645  917423 ..  917449 + -16.8   -5.0538   TAATAAAGGTGAAAA         GGTATCCTCAAA GTA TTTGAGGATACC         TTTTTTAGCATAAAA 100 38
 JI729_04650 NONE
 JI729_04655  919391 ..  919414 +  -3.1  -4.89852   GTTTTTGAGGAAAAG          CACCTGTCCT TTTTT AGG-CTGGTG          TTTTTCTCACTATAA  66 47
 JI729_04660  920424 ..  920452 + -14.1  -4.44548   TTGTGTATAAAACGA        TAAACCTTGCATG AAT CATGTAAGGTTTA        TTTTAGTTCAATATA 100 50
 JI729_04665 NONE
 JI729_04670  922495 ..  922522 +  -9.2  -5.01497   TGGTACAAAGAAAAA        GGAAACACCGGT GTGT AATGGTGTTTCC         TTTTTGTGTCATGAT 100 8
 JI729_04680  925529 ..  925540 +    -3  -2.83668   TTAATGAACAACGTA                CATA ATAT TATG                 CATTTTGTTTTTACA  43 108
        hemE NONE
        hemH NONE
        hemY  929059 ..  929099 + -23.7  -3.51137   GAATTAATCGCACAA  TAAACGAAACGCCTTCAAT CAT ATTGAAGGCGTTTCGTTTG  TTATATAAAATACTT 100 23
 JI729_04705  933080 ..  933103 +   -14  -5.49729   GCTTCTTAAAGTGGG          GAACGCTTAG GTGA CTAAGCGTTC           TTTTTTTGCATCGTT 100 32
 JI729_04710  933522 ..  933553 +  -8.9  -4.84492   TGAATAGTAAATAAA      CCCTAATTTCC AATATAGTAA GGAAATTAGGG       TTTTATTATACTTGA  91 42
 JI729_04720 NONE
 JI729_04725  936943 ..  936974 +  -5.2  -4.76874   TTGAAATAGCAAAAA      GGTGTTCTTAAGAT GTAT ATCTCTAGAACATC       TTTTCCTTTTCTCTT  72 32
 JI729_04730  937703 ..  937735 +  -8.7   -3.7941   TTGAACTTTATTTAC      TAAAAGGATTGTC AAACTAA GATAATCCTTTTA      TTATTATAAAAAATG  80 6
 JI729_04735  940978 ..  940992 +  -7.1   -5.9003   GAAGCGTAGATAAAA               GCACC TTTTT GGTGC               TTTTTTTATTAGTTT  95 32
 JI729_04745 NONE
 JI729_04750 NONE
 JI729_04755  942816 ..  942837 + -10.9  -3.32521   AGTTAAAATAATGAA           TCAGCGAGGG GAT CCC-CGCTGA           TTATAAGCCTGTGCT  87 30
 JI729_04765 NONE
 JI729_04770  945038 ..  945060 + -12.8  -5.80817   ATAAGATGTTATTAG           CCTAGTAGAC TAT GTCTGCTAGG           TTTTTTTATGTTCAC 100 21
 JI729_04780 NONE
 JI729_04785  947129 ..  947160 +  -8.7  -5.10497   TATTCTTCTAAAAAT      GAGGGAGGCTTCC ATAACG GGCAGCCTCTTTC       TTTTTTGCGTAGATT 100 30
 JI729_04790  947971 ..  947994 +    -4  -4.38712   TTTTAATATAATTAA          TTTAGAATTT TTAA ATATTCTAAA           TTTTATAAAGGTGGG  63 142
 JI729_04795  949552 ..  949583 + -18.2  -6.10295   ATGCAAGTGTAAAAA      TGAGGCAACCATCT TTGG AGGTGGTTGCCTCA       TTTTTTTTGTATTGA 100 29
 JI729_04800  949995 ..  950032 +  -5.8   -5.1764   ATCAGATAAACTGAA  GGCGCAC-A-ATGTTCAC ATTT GTGAATATATTGTGTGCC   TTTTTCTATTGTATA  81 129
 JI729_04805 NONE
        cysT NONE
        cysW NONE
 JI729_04820  953921 ..  953966 + -12.3  -3.14211   AAGTGTTTATTCCGG AGGATTTTGTAATTTAAGAGT GTTT ATTCTTAAATTACAAAATCTA TTAATAAGAAAAGGT 100 9
 JI729_04830  955668 ..  955678 +  -2.6  -3.84514   CTGAGGGCGTATGAT                 TATA TAG TATA                 TTTACTCATTCGAAT  50 201
 JI729_04835 NONE
 JI729_04840  956560 ..  956575 +    -4   -3.3363   AAGGTGAAAAGCGGA              TTCTCT GTGA GGAGAA               TTAGATTATTATTGA  50 125
 JI729_04845  957448 ..  957464 +  -2.3   -4.4522   TGATGTGGATAGCGT              TTCTAGA ATT TTTAGAG              TTTATTATAGTTTTG  56 257
 JI729_04850  957840 ..  957852 +  -4.9  -2.98823   GTGGTTAGAAAGATG                CATTT GTT AAATG                TGTATATGAAGGAAG  51 60
 JI729_04855  958678 ..  958688 +    -4   -3.4706   AAAAACATTAAACTC                 TAGA TTT TCTA                 TTAATTATAAATATT  52 109
 JI729_04860 NONE
 JI729_04865  959880 ..  959909 + -10.9  -4.21343   AAGAAACTATTTACG       GAAAGAAGGGCTT ATAT AAGTTCTTCTTTC        TTTGTATATATTAAG 100 83
 JI729_04870 NONE
 JI729_04875  961393 ..  961407 +  -4.4  -2.55015   TAGAGCATAAATGAA               TTTTTT TCG AAAAAA               TAAATTAAGTGACAT  46 71
 JI729_04885  962567 ..  962589 +  -4.1   -6.0458   GAATAAGTAAAAAAA           CGAAGAGTT TAAAT AGCCCTTCG           TTTTTTTTACTTTAT  91 35
 JI729_04900  965021 ..  965041 + -10.5  -5.47218   ATAGGGGTTATGAAA            TAGAGAGCT GAT GGCTCTCTA            TTTTTTTAAATAAAA 100 37
 JI729_04905  966125 ..  966146 + -10.2   -4.3129   ATTTCGGATTAAAAA           GGAGAGCA TATCTT TGCTCTCC            TTTTCCTCATCACTG  95 29
 JI729_04920  968822 ..  968845 +  -8.2  -5.64274   AATAATAGGGTAAGA          GCGAATCATT GGGA GATGGTTCGC           TTTTTTTATAAGTGG  95 36
 JI729_04925  969175 ..  969212 + -10.7  -4.37658   ATTACGGTAATTGGT   TGCAGT-GACGGGGTGTT GGA AGCACCTCGTCTACTTCA   TTTTATGCAAAACTT 100 62
 JI729_04940 NONE
 JI729_04945 NONE
 JI729_04950 NONE
 JI729_04955  973893 ..  973912 +  -9.4  -5.72616   TAAAGGTAGGTAAAA            CTCTTCTA TTTG TAGAAGAG             TTTTTTTATGTAAAT 100 28
 JI729_04960  975287 ..  975308 +  -6.6  -5.61596   GAAACAAAGCAAAAA           GGAGTAGC ATGATA GCTACTTC            TTTTTTTATAGGGAT  90 19
 JI729_04965  977191 ..  977217 +  -9.6  -5.63504   ATAAATATAAAAAAA         TCATCCTCTTTT AAG AAAAAAGGATGA         TTTTTTTATCCCGTT 100 59
 JI729_04970  978268 ..  978289 +  -7.4  -5.85425   GAGTGAAATATGAAA           GCACAAAT AGAAAA ATTTGTGC            TTTTTTGTTTGTTTA  95 40
 JI729_04975  979204 ..  979227 +  -9.6  -5.37043   AAAATAATACAAAAA          GGTCGTTGTT GTAT AACAGCGGCC           TTTTTTGTATGAAAT 100 70
        aceB NONE
        aceA  982270 ..  982306 + -13.1    -4.386   CAGTTTACGAAATAA    AAGGAAGGGGCACCTTT TTG AAAGGTGCCCCTTGTTA    TTTTCTAAACGATTC 100 26
        cspA  984196 ..  984213 + -11.3  -5.88565   TGATGATGGAAAAAA             GGATGGC TAAT GCCATCC              TTTTTTTGTTGTGGA 100 50
 JI729_05015  985975 ..  985994 +   -10  -6.02919   AGGCGAAGTGTGAAA            GGATGGGG GAAT CCCCATTC             TTTTTTTGTTTGTCA 100 28
 JI729_05020 NONE
        lepB  987520 ..  987539 +  -6.5  -5.23316   TAGAAGTATAGAAAA            GACAAAC AACTCA GTTTGTC             TTTTTTCGTGTACTA  82 51
        addB NONE
        addA NONE
 JI729_05040  995262 ..  995280 + -11.8  -5.46629   AGATAAAAGAAAAAA             GTAGGAGA TAT TCTCCTAC             TTTTTTTACGCTGTT 100 139
 JI729_05080  998700 ..  998724 + -11.6  -5.27923   GTGAAGTGAAGAAAA          GAGCTATCTT GTTAA AAGATAGCTC          TTTTTTATGGCCTTG 100 32
 JI729_05095 1000852 .. 1000888 +  -8.2   -5.8096   CAAATAAAAATAAAA   CCACCTTATAATCTCAA AGAC TTGGGAG-ATAAGGTGG    TTTTTATTTTTTATG 100 34
        asnB 1003547 .. 1003570 + -11.1  -5.06414   GGGAATAAGGGAAAA          GCGACTTAC TTTTAT GTAAGTCGC           TTTTTATTAAAGAAA 100 33
        hemH NONE
        katB 1006222 .. 1006242 + -13.3   -5.4251   AAATAAATAGGAAAA            GACGACCGG GCT TCGGTCGTC            TTTTTTGTGTGTAAA 100 35
 JI729_05125 1009282 .. 1009313 + -14.6  -5.47159   TAGTGAGAGGAGGGC      CAGGTTAGGAAGGG GATT TTCTTCCTAACCTG       TTTTTTGTGTTAGCA 100 165
 JI729_05130 1010373 .. 1010395 + -16.4  -3.38291   TGAAATATAATAGAA           CCTACAGGGA AAA TCCCTGTAGG           TTCTAAACTTATAAA 100 58
 JI729_05140 1012784 .. 1012815 + -13.2  -5.41359   ATAAAAGATTAAAAA      GCACAACCTTATCT AAAA AAATAAGGTTGTGC       TTTTTTAATTTCCTT 100 42
 JI729_05155 1014898 .. 1014917 + -12.2  -5.22312   TTCGGAAAGATTAAA            GAGGACCA AAGT TGGTCCTC             TTTTTTAATGTAAAT 100 27
 JI729_05175 1016852 .. 1016871 + -12.2  -5.37345   AAAACCGTAACAGAA            GCCGCAAT CATT ATTGCGGC             TTTTTTGTCGTTACA 100 31
        clpB 1019666 .. 1019688 + -12.8   -5.6473   AATAAAAATAAAAAA           GAGTTCGGAT AAA ATCCGGACTC           TTTTTTTAGTGTTGT 100 36
 JI729_05190 1020769 .. 1020793 +  -3.6  -3.81557   AAGAAGAATTATGAA         GCTCC-CATAT ACAT AAATGAGGAGC          TATTTGTTTCAGAGG  54 27
 JI729_05195 NONE
 JI729_05200 1021926 .. 1021957 +    -5  -5.55769   TTTAAGATGAAGAGA      GGCCCGAACCGT GGATAGAA GCGGTCAGGGCC       TTTTTTATTCTCGCC  86 51
        fabH NONE
        fabF 1024650 .. 1024689 + -22.6  -4.86385   AAATAATAGATAAAA  TAAGGAGTTTTTTCGCAA TATA TTGCGAAAAAACTCCTTA   TTTATTTTTACGCCT 100 35
 JI729_05215 1025541 .. 1025558 +  -2.7  -5.63374   TCATATATAAAAAAA             CAGGA TTTCTATT TCCTG              TTTTTTTAGTATTAA  76 31
 JI729_05220 1026422 .. 1026451 + -16.7  -4.38712   TGAGCAAAAGGTAAA       TTAAAAAACCGCC AATT GGCGGTTTTTTAA        TTTTGTAGAAATCCA 100 22
 JI729_05235 1030352 .. 1030380 + -11.1  -4.17316   TTCCATCGTTTACAA        GGGTATATGCCTA TGA TGGGCATATGCTC        TTATTTTAAAAAAAT 100 49
 JI729_05240 NONE
 JI729_05245 NONE
 JI729_05250 NONE
 JI729_05255 1034391 .. 1034431 + -13.5  -2.69151   AGATTTATCAATAAG  AAAAAGAGCCATTCTTCTG TTA TGGAAGGATGGCTCTTTTC  TACTATATAAAAGAA 100 27
 JI729_05265 1037985 .. 1038000 +    -9  -5.54894   GAAATAAGAAAAAAA              GCAGGT GATC ACCTGC               TTTTTTTAATACGTT 100 34
         spx 1039216 .. 1039241 +  -8.5   -5.9663   ATAATAATATGAAAA         CCTTCTACCTAT TAT ATAG-TAGAAGG         TTTTTTTTAATGTTT 100 43
        mecA 1040952 .. 1040977 +  -9.1  -4.96848   CCTGCTAAAACGTAG         GCCGATTTC TGTAGTAT GAAATCGGC          TTTTTATATGAAGAA 100 26
 JI729_05290 1042572 .. 1042596 + -11.5  -5.40072   CCTTTATTATAAAAA          GAGATGTCCGA AAT TGGGACATCTC          TTTTTTTAAAAGGAA 100 29
 JI729_05295 NONE
        pepF 1045781 .. 1045802 +  -8.1   -5.4833   AAAGTAATGAAAAAA           GACGAGGGAT TGT AT-CCTCGTC           TTTTTTGTTGAATAG  95 34
 JI729_05325 NONE
 JI729_05330 NONE
 JI729_05335 NONE
 JI729_05340 1051258 .. 1051295 + -15.3   -5.4505   CGGCATACTTAAAAA   GGGAACAAAATTCTTATA TTA TA-AAGAATTTTGTTCCC   TTTTTTCTTAGCGGA 100 29
 JI729_05380 1060065 .. 1060083 +  -3.2  -4.15864   AAAGCGTAATAGGTT             TCGTTTTT TGT AGAAATGA             TTTATCGTTATTCTA  55 32
 JI729_05385 NONE
 JI729_05390 NONE
 JI729_05395 NONE
 JI729_05400 NONE
        rfbC NONE
        rfbB NONE
        rfbD 1065492 .. 1065517 +  -9.2  -5.67283   TTATAGAAACCAAAA         GTCATTAACA AATTTC TGTTAATGAC          TTTTTTGTTTGCCTT 100 18
        fabI 1066399 .. 1066426 +   -10  -5.50774   ATATTAATTTTTAAA        GGACAATCTC TAAATGCT GAGATTGTCC         TTTTTATTTGTTCTG 100 46
 JI729_05425 1067066 .. 1067100 +    -5  -3.82375   GCCGGTTTTTAAATA     TGTAAAGGTGGTAGAA AGC TTCTACCACCCCAATA     GTTTTTTAGTTTACT  61 29
 JI729_05435 NONE
 JI729_05440 1068390 .. 1068416 + -14.6  -4.75372   TATTATGTATAAAAA         GCGGTATTTCTG TAT TAGAAATACCGC         TTTTTACTAGCTAAT 100 68
 JI729_05475 1074769 .. 1074788 +  -6.5  -5.54907   TGTTGGAGAAGAAAA            GAGAAGT TATGAT ACTTCTC             TTTTTGTTTTATAGA  90 41
 JI729_05480 1075148 .. 1075190 + -12.3  -4.01888   AACTCAAATATTGAA ATC-AAGTAAAAGAGTGGCT ACGA AGCCACTCTTTTACTTTGGA TTTGTCATATAAGGT 100 17
        trpE NONE
 JI729_05500 NONE
        trpD NONE
        trpC NONE
        trpF NONE
        trpB NONE
 JI729_05525 1084472 .. 1084490 +  -9.6  -5.48213   GCAACAAAACAAAAA             GAAGAGGC GTA GTCTCTTC             TTTTTGTTTTGCGTA 100 14
 JI729_05530 1084924 .. 1084939 + -10.4   -4.6644   GGGAGTGAATGAAAA              GGAGCC GTTT GGCTCC               TTTTTCGAATCTGTT 100 33
 JI729_05535 1086534 .. 1086552 + -11.8  -5.96219   TTGAGAAATTAAAAA             TCCTCCTA ACA TAGGAGGA             TTTTTTTTATGAGTG 100 29
 JI729_05540 1087305 .. 1087341 +   -19  -4.36914   AAGGGGAATAATTAA    TAAGAAGAGGGCGTTT AAAAA GAACGCCCTCTTCTTA    TTTTATAAAACGAAA 100 26
 JI729_05550 NONE
 JI729_05555 1090591 .. 1090633 +  -9.4  -3.76413   TTTAAGAGCATCTTC TGATTCCGATGATATAGTAA CCG TTATTGTATCATCAGAAACA TTTACAATTTTAACA  81 228
 JI729_05565 1092389 .. 1092408 +  -9.4  -5.78622   GCAAGGAGAGCAGAA            TAGCACTT TTTA AAGTGCTA             TTTTTTTTACAATGA 100 23
 JI729_05570 1092970 .. 1092990 +   -14   -4.2349   TAATCTAGTAAAAAA            GCACGCCG TCCAT CGGCGTGC            TTTTAACTATGCAAA 100 33
 JI729_05600 1103826 .. 1103841 +  -7.6  -5.95946   AATGTAAAAACGGAA              CCTTAC TTCG GTAAGG               TTTTTTTATTATTAA 100 41
 JI729_05605 NONE
 JI729_05610 1104577 .. 1104601 + -12.2  -2.95113   GATTGATATAAGAGA          GGCCTTGTAG GAATG CTGCAAGGCC          CTTTACCTTTTGGGA 100 35
 JI729_05615 1105339 .. 1105376 + -13.7  -5.24129   TGAATTAGATAAAAA   GAGACACCATATC-ACGT AGA AGGTTGATATGGTGTCTC   TTTTTTATGACCCCG 100 42
 JI729_05635 1107618 .. 1107640 +  -4.2  -5.28561   GATTGATGAGAAGGA           TAAGAAAGAG TAA TTCCTTCTTA           TTTTTATTGTATATT  75 13
 JI729_05640 1109083 .. 1109107 +  -7.9  -5.53079   AATTACTAATAAAAA          GACTGTGTAAA ATT TTGGCACAGTC          TTTTTTCTATATTTT  95 40
 JI729_05645 NONE
 JI729_05650 1110478 .. 1110514 + -15.4  -5.00846   GTGAAGAAAGATAAT    AAGAAAAAGGGCTATC ACATG GATAGCCCTTTTTCTA    TTTTTCTAGTATTTG 100 27
 JI729_05655 1111481 .. 1111509 +  -6.8  -5.21459   TAGTAATATTTATAC       GAGTGTGAGGG AACGTTAG CCCTCAC-CTC        TTTGTTTTTCTTTTT  84 107
        calY 1112388 .. 1112401 +  -9.5  -5.93809   AAAAATAATAAAAAA               GCGGG TATT CCCGC                TTTTTTTTATAAAGA 100 33
 JI729_05675 1115734 .. 1115758 + -13.7  -5.60993   GTTAATACAGTAAAA          CTACCGAGAGA TTT TCTTTCGGTAG          TTTTTTTGTGAGCAA 100 36
 JI729_05680 1117302 .. 1117321 +  -9.3   -5.0916   GCCGTATGATAATAG            CCCCTTC GCAATG GAAGGGG             TTTTTCTGTTCGACG 100 65
        potA NONE
        potB NONE
        potC 1120117 .. 1120130 +  -4.5  -3.96148   GGTGAAGAAAACTCT               GGAGG ACAC CTTCC                TTTATAATACGAACG  61 5
        potD 1121235 .. 1121259 + -12.3   -5.1861   AAATAAGTAAGGAAA          TGCGGTTTCTA AAG TAGAAATCGCA          TTTTTTCATAGTAGG 100 35
 JI729_05705 1121938 .. 1121973 + -20.8  -5.76237   AGAGAGATAGAAAAA    CGTCTGGAAAAACTAT TATT ATAGTTTTTCCAGACG     TTTTTTGTTTATATC 100 31
 JI729_05710 1124240 .. 1124260 + -12.7  -5.28176   AATCATCATAAAAAA            TGCTCATCA TAT TGATGAGCA            TTTTTTATGAATAGC 100 30
 JI729_05715 1124755 .. 1124778 +  -8.9  -3.54256   GACTTAGAGCTTGAG          GGGCAGTCT ATTATA AGACTGTCC           TCTATTTTTGGCAGT  76 27
 JI729_05720 1125858 .. 1125868 +  -5.4  -3.17763   TAAGAGAAAAGAGAG                 GTGA GAA TCAC                 TTGATCAAATATAAG  54 106
 JI729_05725 1126479 .. 1126500 + -11.7  -4.47397   ATGAAACTTAAAAAA           GAGTCTTCT CATG AGAAGACTC            TTTTAATCTATTTAT 100 30
 JI729_05750 NONE
 JI729_05755 NONE
 JI729_05760 1134945 .. 1134967 +  -7.8  -4.21773   ACAGGATGAGGGGGG           CATGTTCTAA TTT TTAGGGCATG           TTCTTTATATTGAAG  79 16
 JI729_05765 1136001 .. 1136019 +  -3.9  -4.41114   AGAAGAGGGAGAGGA            TAGGC-CA TGGT TGAGCCTA             TTTCTTCTCTGCTAA  62 104
 JI729_05770 1136819 .. 1136829 +    -4  -2.88663   CTCATGAAGGGGGAA                 CATA AGC TATG                 TCTATGAAAATCAGT  47 34
 JI729_05775 NONE
 JI729_05780 1138970 .. 1138990 + -12.6   -4.7373   ATAAAAGAGGGGAAA            GCAGGCCA GGAAA TGGCCTGC            TTTTTAGTAGAATAA 100 37
 JI729_05785 NONE
 JI729_05790 1140123 .. 1140143 + -12.7  -4.81685   GTGGGAAGCTAAAAA            CTCCAAAGT AAA ACTTTGGAG            TTTTTAATGCTTCAT 100 29
        phaR 1146337 .. 1146347 +  -3.2  -4.16943   CAGATAAAAGAGAGA                 GGGA GAA TCTC                 TTTTCACGTATAAAC  55 60
        phbB 1147209 .. 1147239 +  -3.4  -5.75342   TAATGAAGCAAGAAA      AAAGTGCATATCC ATAGCA GGA-ATGCACTTC       TTTTTTTTAGAAGGA  83 38
        phaC 1148376 .. 1148399 + -10.4  -5.60993   ATTAAAGATAAAAAA          TCCAACTAGC CTAT GTTAGTTGGA           TTTTTTTATGAAAAA 100 36
 JI729_05845 NONE
 JI729_05850 1151034 .. 1151060 + -16.8   -5.2189   TTGGATAGTATGAAA         CCATTCTACCTA CGT TAGGTAGAATGG         TTTTTTAGTCGTTAA 100 33
 JI729_05860 1151699 .. 1151723 +   -13  -5.63504   AAAGGGAAACAAAAA          TGAGGCGTTT TTTAC AAACGCCTCA          TTTTTTTGTGGGATT 100 23
 JI729_05865 NONE
 JI729_05870 NONE
 JI729_05875 NONE
        phnX NONE
        phnW NONE
 JI729_05890 NONE
 JI729_05895 1159740 .. 1159764 + -12.9  -4.87592   GTGAAAGCACATAAA          CTCCCGCCTAA TTT TTAGGAGGGAG          TTTTATTATCTGTAA 100 46
 JI729_05900 1162542 .. 1162571 + -13.1  -5.36441   AAAAAATGAGGAAAA       TACGCTATTCTTT AATT AAAGAGTAGCGTA        TTTTTTATGTACAAA 100 125
 JI729_05905 1163381 .. 1163393 +  -2.6  -3.32202   TATTAATGATTAAGG                GGGC AAGGA GCTC                TGTTATATAAAAATG  45 3
 JI729_05910 1164167 .. 1164195 + -11.2    -5.252   AAGTTAAAAAGAAAA        GTACCTATCTGT TATAT ATAGATAGGTAC        TTTTTTGTCCCGCTA 100 39
 JI729_05920 1165857 .. 1165891 + -13.2  -2.98942   GGTTTTATGAAATAA     GTATAATTACCCTTAT AGG ATAAGGATAATTATAC     TATGTGTAACGGAAT 100 26
 JI729_05930 1168039 .. 1168062 +  -7.5  -5.73978   ATATGTTCCAAAGGA          GCTTTGGAT AAATAA ATCCAAGGC           TTTTTTATTTGTAAT  95 40
 JI729_05935 1169959 .. 1169984 + -10.5  -4.07568   ATTCAGAATACTAAA         GAGGTGTTTCT AATA AGGAGCACCTC          TTTTCACAAACAAAA  95 109
 JI729_05940 1170554 .. 1170571 +  -9.9   -5.1675   AACGCTAAAGTGGAA             GAAGTGG GAAA CCACTTC              TTTTTTGATACGTGC 100 33
        queC NONE
        queD NONE
        queE NONE
        queF 1174704 .. 1174752 + -27.3  -3.32984   ACAATTGATAATCGT TAATAGAAAGAAAGGGCCTGTAT ACT ATATAGGCCCTTTCTTTCTATTA TATTATGCATTTTGA 100 23
 JI729_05975 NONE
 JI729_05980 1176050 .. 1176075 + -14.9  -4.87389   AAATTTAACATAAAA         GCACACGATTT ATAT AAATCGTGTGC          TTTCTTTTTAAGATA 100 28
 JI729_05990 NONE
 JI729_05995 1177779 .. 1177813 + -11.7  -2.52946   TCTGTTCTTTTTTGC    GT-GATGCTGGAGAAA TATA TTTCTTCAGCATCTAC     CGTTTTATGACAAAA  89 197
        nrdI NONE
        nrdE 1180545 .. 1180584 +   -16  -4.35483   ACTAAATGAATAACC  CAATAGTATGAGCAGGGTT ATG AACCCTGCTCATACT-TGG  TTTGTTCTACTAAAC 100 55
 JI729_06015 1182284 .. 1182303 +    -5  -2.87344   GATGATATAGTCTCT            TCTTACAG GAAA CTGTAAGC             TGTATAAACGGCATA  52 98
 JI729_06020 1182744 .. 1182793 + -23.5  -4.90778   ACTTTTAATATAGGA TTATAAGGAAAAGCTGTCTTATT GATT AATAAGACAGCTTTTCTTTATAA TTTTGTTTACATAAC 100 33
 JI729_06025 NONE
 JI729_06030 NONE
 JI729_06035 NONE
 JI729_06040 NONE
 JI729_06045 1186510 .. 1186531 +  -8.7  -5.10461   TTATAATAAAAGAAA           TCCCCGCTT GTAA AAACGGGGA            TTTTTATTACATAAA 100 35
 JI729_06050 1187762 .. 1187794 + -15.2  -4.04209   GCACATAATAGATAA      TTAAAAAGTAGCTC CTTAA GAGCTACTTTTTAA      TTTGTAATAATTTCC 100 26
 JI729_06065 NONE
 JI729_06070 1189623 .. 1189633 +  -2.6  -2.74019   GAAGTATTAAAATTA                 TTTT AAG AAAA                 TAATTACAAATTATG  41 20
 JI729_06075 1190116 .. 1190137 + -13.1  -5.00138   TTATTATAAGTAAAA           GGAAAAGCG TAAT CGCTTTTCC            TTTTTAATTTGAATA 100 28
 JI729_06085 1192256 .. 1192280 +  -9.3   -4.5287   AAATATATACAAAAA          GACCACTTGAG TAA TTCAAGCGGTC          TTTTCATTAGTTTGC 100 16
        amaA 1198134 .. 1198157 + -11.1  -5.18866   GAAAAACAAAAAAAG          GCAACTGCA CTCTAT TGCAGTTGC           TTTTATTTCTTTCCG 100 40
 JI729_06120 NONE
 JI729_06125 NONE
 JI729_06130 1199765 .. 1199782 +  -9.9  -5.64873   ATATCGTACATTAAA             GGATGCA ACTT TGCATCC              TTTTTTGTTGTTGAC 100 27
 JI729_06135 1200010 .. 1200032 +  -4.2  -2.87647   AGGAGAGAGTATATA          GGGA-GAGA ATGTAA TCTCATCCC           TGTAATCTCATCCCT  47 12
 JI729_06145 1202031 .. 1202054 +  -9.6  -4.77867   TATGCATAAAGAAAA          CAGCCGCT TTATTATT AGCGGCTG           TTTTGTGTTGTATAT 100 512
        uppP 1204375 .. 1204423 + -21.6  -5.03405   TATTCTATTTCTTCA TTATGTAAAATAAAAACCTGCCG AGCT CGGCAGGTTTTTATTTTAC-TAA TTTTTCTATCATGTT 100 18
 JI729_06180 1206082 .. 1206111 +  -7.9  -3.89956   TTACGTGATAAAATA       GAAGGTCTTCCTT ATAG ATGGGAGATCTTC        TTTCGTGTGTAATAG  76 63
 JI729_06185 1206348 .. 1206367 + -10.8  -5.37593   GAGTAAATCAAAAAA            GGAGTGAA ATAA TTCACTCC             TTTTTTGATTTACGA 100 19
 JI729_06195 1210229 .. 1210265 + -10.2  -5.00616   GAAGATGTGTTTACA    GGATAAGGTATCCCGC GTTAA GCGAGATACCTTTTTC    TTTTTTAGAACAGGG 100 20
        ytfJ 1211397 .. 1211416 +  -2.2  -2.56908   AATAAGGGAGAGGAA            TTTATGAT TAAT ATCAAAAA             CTTAGTAGTTGGCTT  39 131
 JI729_06210 1211802 .. 1211837 +   -12  -5.08824   CGTTAGGTGAATATA    AAAAAGAGGACTCCTT TTAA AAGGAGTCCTCTTTCA     TTTTTTAAGTGCGAC 100 338
        ilvE 1213710 .. 1213722 +  -3.4   -5.0538   TACGAAGAAAATAAA                GTTG GATAA CAAC                TTTTTTAACATAAGA  68 17
        ilvB NONE
        ilvN NONE
        ilvC NONE
        leuA 1218797 .. 1218843 +  -5.5  -2.59742   ATAGCGCTTGTGAAA TAAATATTTGATAGGTGAGAGAA GCT TTC-CTCACCTATCAAAT-TAAA GTTCTGAAAATTCGG  54 23
        leuB NONE
        leuC NONE
        leuD 1222062 .. 1222097 + -15.7  -2.78463   ACCTAGCGTGAAAAC    GTGTAGGTACAA-GGG TTATT CCCGTTGTACCTACAC    TCTACTGAAGAGCCT 100 193
 JI729_06265 NONE
        hisG NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA 1227268 .. 1227278 +    -4  -3.01712   AAGAAGTGTTACAGG                 TAAC GAA GTTA                 TGTTAGCGAAACGAA  48 9
        hisF 1228029 .. 1228040 +  -4.4  -3.23708   CAAATGTTGAGGTGC                GGTT ATGA AACC                 TAATTTTTCAAAAGG  50 18
        hisI NONE
        hisE NONE
 JI729_06310 NONE
 JI729_06315 1229943 .. 1229962 +  -5.7  -5.14563   AAAAGCGTAAGAAAA            GGGGAGA GTTGCA TCTCCTC             TTTTTTCATGGAAAA  79 31
 JI729_06320 1231054 .. 1231086 +  -8.6  -5.56573   TTAGTCACAAAATAA     AAAGAAA-CCTTCCG GACT CGGAAGGTTTTCTTA      TTTTTCTTTATTTGT 100 26
 JI729_06335 1234857 .. 1234880 +  -9.6   -5.4492   TTTCCTAATAAGAAA          CGCGTGTGAAC ATT GTTC-CGCGCG          TTTTTTGTCTATCTA 100 372
        lysA 1236528 .. 1236547 +  -2.9  -5.96219   TATATTACCGAACAG            TCTTTTC GAAATG GGAAAGA             TTTTTTTTATGAATA  85 275
 JI729_06345 1236749 .. 1236785 + -16.1   -5.0925   ACTAGAAAAACTAGA    GGCGGTTTTAACCTATT TTC ATTAGGTTAAAACCGTC    TTTTTGCTTTTACAG 100 50
 JI729_06350 NONE
         sat NONE
        cysC NONE
 JI729_06365 1240939 .. 1240956 +  -4.9  -2.76087   GCGTCTTAGGAGGGA             CGATATG GATT TATATCG              ATTTGAAGCTGTGTT  50 32
 JI729_06370 1241170 .. 1241195 +  -6.9  -4.23781   ACGAAAAAATAAAAA         CTTCCGTTCTT ATAT ACGAATGGAAG          TTTCATTTTAATAGA  74 52
        cobA 1242002 .. 1242020 +  -2.5   -3.0682   GTAAGTGGAGTGTTG             TAAAATG AAAGC CGTTTTA             TATATATGTCATGGA  43 23
 JI729_06380 NONE
 JI729_06385 1243655 .. 1243686 +   -16  -5.86976   TATATTACATATATC      GTCCTCTACATGCA TATT TGCGTGTAGGGGAC       TTTTTTATTTTCTAA 100 330
 JI729_06390 1245120 .. 1245168 + -14.9  -3.20858   TAGGTGTATTTAAAA TGTTTGCATAAAAAAAGACGGGG ATC TCCCGTCTTTTTTTATGTGGATG TTGATGAGTGTAATA 100 15
        gltP 1248484 .. 1248506 + -12.8  -4.64844   TTATAATATGAACAA           GCTCTCACAT AAT ATGTGGGAGC           TTTTCTGTATATAGA 100 41
 JI729_06410 1249305 .. 1249328 + -11.8  -4.95167   CTTATAGATGTATAA          GACCTCTTCT CATC GGAAGAGGTC           TTTTGTTATTCATTA 100 275
 JI729_06415 1250721 .. 1250744 +  -8.9  -5.47218   TTAGTAATTAAAAAA          CGTGCAGAG AATAGA TTCTGCACG           TTTTTTTGCGTAAAG 100 54
 JI729_06420 NONE
 JI729_06425 1251978 .. 1252016 + -12.7  -3.05022   CTTATGATATAGTGA   TAGGAGAAAAGGTGTTG GAAAG CAATGCCTTTTCTTCTA   TGTATATGTGACAAG 100 63
 JI729_06430 NONE
 JI729_06435 NONE
 JI729_06440 1254575 .. 1254602 +  -9.2  -3.07935   GATAAAGTGAAGCTT        TAATTGGCGGGG AATT CCTCGCTGATTA         TTGGCTCGATACAAT  76 129
 JI729_06445 1254987 .. 1255000 +  -8.1  -5.40474   TCAAATGTAAAAAAA               CTCCC TTTT GGGAG                TTTTTTTAGGAGGCT  95 31
 JI729_06455 1257162 .. 1257191 + -16.6  -3.35867   TAGATTATGAAAAAA       GGAAGCCTCACA TTATTT TGTGAGGCTTCC        TTCCTTACAACTTCA 100 31
 JI729_06465 1259007 .. 1259051 +  -9.5    -4.431   TATGACCTTTCCTAG GAAATGATAATAGAGAGGGG AAAGCA CCCCTCTCTATTA-CTTTGC TTTTGTAGATGGCTC 100 97
 JI729_06475 1260548 .. 1260576 +  -3.4  -4.72272   ATTTCTACAAGAGAA       TGTTACAA-GTAT AGTC ATACGTTGTAATA        TTTTTAGTAGAGAAG  64 85
 JI729_06480 1261122 .. 1261149 + -12.2  -5.19275   ATACAAACAAAATAA        TAAGCTAGCTAG AATT CTAGTTAGCTTA         TTTTCTTTTGTAAAT 100 26
        hmpA 1262499 .. 1262519 +  -6.9  -5.82036   CAATAAGCAAAAAAA            CGAGGTA TTTATTT TACCTCG            TTTTTTATTTGTTCT  95 35
 JI729_06495 1263422 .. 1263438 +  -9.5   -5.8187   TTCTTCATTAAAAAA              GATGTCA ATA TGACATC              TTTTTTTATTAAATC 100 30
 JI729_06515 1268620 .. 1268643 + -11.1  -5.36441   TTTTGGTAAAAGAAA          GAGGCGAAT AATGAA ATTCGCCTC           TTTTTTGTATGAAAA 100 32
 JI729_06535 1272111 .. 1272151 + -15.6  -2.87132   AATGATAATAAACAA  GAAAGGCACTGTACAAAC AGGGG GAATGTACAGTGCCTTTC  TATATGAAAAAGAGG 100 36
 JI729_06560 1277060 .. 1277077 +  -8.5  -5.95286   TCAAAAAAGAAAAAA             CAGCTAA GAAT TTAGCTG              TTTTTTCTTTTTCCT 100 19
 JI729_06570 NONE
 JI729_06575 1280739 .. 1280772 + -19.9  -4.43859   ACAAATATTGATTGA     GGAAAAGAAGCTAAG GTGA CTTAGCTTCTTTTCC      TTTTGTACAGTTATA 100 30
 JI729_06580 1281754 .. 1281772 +  -7.4  -5.14965   ATGGACACCATATTA             GACGCAAA TTC TCTGCGTC             TTTTTTAATGGAAGT  86 25
 JI729_06585 NONE
        spmA NONE
        spmB 1284152 .. 1284179 + -11.5  -5.74122   ATAATACGTATACGA        CCACTATTAAG GTGTAG CTTAATAGTGG         TTTTTTTATGTGGTA 100 70
        rluB 1285142 .. 1285167 + -10.5  -4.20516   TATAGAGTTAAAAAT         TCACCAGTGGA GTGC TCTGCTGGTGA          TTTATTCAATACAAC  95 43
        resA NONE
        resB NONE
        resC 1288677 .. 1288711 + -13.9  -4.90296   ATATGCATAGAGAAA     TAAAATAGGAGAGTG TATGT CACTTTCCTATTTTA     TTTTTGTCAACTTTT 100 31
        resD NONE
        resE 1291498 .. 1291551 +  -5.6  -5.47431   TTGATAATGAATAAA GTTCTGCTGTTTTTTATTTTTTTG TAAACT CAATTAAATAAAGAATGGTAGAAC TTTTTTCTATCTTGA  85 57
 JI729_06630 1292173 .. 1292194 +  -5.9  -5.75478   TGATAAGAAAGAGAA           GGAAGTGGA GTAA TTCACTTTC            TTTTTTTGTATACTT  93 13
 JI729_06635 1293016 .. 1293043 + -12.8  -4.17048   TATATCTAAAAGAAA        ACCGTCCCAAAA TTTA TTTTGGGACGGC         TTCTTTTACCAAAAA 100 157
 JI729_06645 1294878 .. 1294904 + -12.5   -5.4505   TAATATATATTAAAA         CCATTAGTAGT GTGAA ACTACTAATGG         TTTTTTATTAAGGAA 100 38
 JI729_06655 NONE
        recQ NONE
 JI729_06665 NONE
 JI729_06670 NONE
 JI729_06675 NONE
 JI729_06680 NONE
 JI729_06685 1301570 .. 1301605 +   -15  -5.27335   TACTTTGTGAAAAAA    CAAAACCTCAGCTA ATACAACA TAGCTGAGGTTTTG     TTTTTATTTGGAGAA 100 11
        gudB 1303203 .. 1303228 + -12.7  -5.80364   TATATCTTGAGAAAA         CGTGATTTCCT TTCG AGGGAATCACG          TTTTTTTGTTGAAGT 100 46
 JI729_06695 1303491 .. 1303513 +  -6.3  -2.69178   AAAAATAAAAAAGAA           CGCTTGTTC TATAC GAACAAACG           TGCTATACTCTCCTT  57 44
 JI729_06700 NONE
 JI729_06705 1304449 .. 1304466 +  -5.6  -5.80727   CAATAAAGATAGGTG             CCTACT GCTGTA AGTAGG              TTTTTTCTTGTTTTT  93 62
 JI729_06710 1305505 .. 1305533 + -19.7  -5.14163   AGAGAAAAATAAAAA        GGAGCTGTCGGGA AAA TCTCGACAGCTCC        TTTTTATTCGTGCAT 100 29
 JI729_06720 1306938 .. 1306954 +  -5.1  -4.83677   AGCAAATGAGAAGAA              GCAGG GTGAACA CCTGC              TTTTCGTTTTGTTTT  72 98
 JI729_06725 1307674 .. 1307694 + -10.5  -5.96894   TGTTTGCGAAATAAA            GAAAGGGGA TAA TCCTCTTTC            TTTTTTTGTTTAAAT 100 27
        rpsA NONE
 JI729_06735 1310208 .. 1310251 + -10.6  -4.49314   TACTGCGCATTATAG TAGGAGATAAAAAATCAACC GTTC GGTTGATTTTTTTTGTTCTA TTCTTTTTCGTAATA 100 16
 JI729_06745 NONE
 JI729_06750 NONE
 JI729_06755 1312515 .. 1312535 +  -9.8   -5.1101   TTCTGGAATGCAAAT            CCCTTCTT GCACA AAGAAGGG            TTTTTTACATAATAA 100 85
        engA NONE
        gpsA 1314929 .. 1314975 + -14.9  -5.19916   ATACCTGATTTACTG TAAAGAAAAGCGACAGAAGTAC ATTT GTACTTCTATCGCTTTT-TTTA TTTTTTGGGTCTTTT 100 23
 JI729_06770 1315385 .. 1315411 + -10.8  -5.38839   GGCATATTTGGTCAA         CCGAAGCGAGAG ATA CAATCGCTTCGG         TTTTATTTTTGTCTA 100 111
 JI729_06775 NONE
 JI729_06780 1316556 .. 1316589 +  -6.2   -5.5208   ATGATAAGTCATGAA     CCTTTCTTTTAG TGAATAAGTT CTAGAAGAAAGG      TTTTTTATGTTATAC  90 37
      spoIVA 1318276 .. 1318295 +  -7.9  -6.12458   TACTATAAGAAAAAA            TCCCTCT CACTGT AGAGGGA             TTTTTTGTTTTTTTG 100 33
 JI729_06790 1318861 .. 1318887 + -11.7   -5.0925   CATATTAACAGGGAA         GAAGAGTTTCC TTTTT GGGAACTCTTC         TTTTTGCTTTTAAAA 100 47
        folE 1319531 .. 1319552 +  -9.5  -6.63964   TTAAAACGAAGTAAA           GAAAAGCGG GAAA CTGCTTTTC            TTTTTTTTTTTAGTA 100 27
 JI729_06800 NONE
        menG NONE
        hepT NONE
         ndk 1322816 .. 1322847 + -15.4  -6.09196   TGATAATAGTAAAAA      GTGCAAGGAGAATA GGGG TATTCTTCTTGCAC       TTTTTTTATTTTCAG 100 77
        aroC NONE
 JI729_06825 NONE
        hisC 1326543 .. 1326561 + -13.2  -5.27923   TTAAGAGATTGTGAA             GGCTCCTA GTA TAGGAGCC             TTTTTTATCGCATTC 100 37
 JI729_06835 NONE
 JI729_06840 1328780 .. 1328808 + -14.1  -5.54264   TCAGACTTTTATCAA        GAAAAACTACCTA TAT TGGGTAGTTTTTC        TTTTTTTACCTCTTT 100 73
 JI729_06845 NONE
        qcrA NONE
        qcrB NONE
        qcrC 1331486 .. 1331520 +   -16  -3.55604   ATAATAAAAAATAAT     AAAAAGCTGACTACAA AAT TTGTAGTCAGCTTTTC     TATTTAGTTGGATGA 100 27
 JI729_06865 1332175 .. 1332186 +    -3  -4.02022   CTTACGTGAGCAAAG                GAAA CAAT TTTC                 TTTATGATGGTTAGA  54 7
 JI729_06870 1332894 .. 1332911 +  -4.2  -6.02919   ATGTCACAGAAAAAA             TTCTCT GCTTAA AGAGAA              TTTTTTTCTTTGTAA  91 14
        ypjB 1333888 .. 1333899 +  -2.2   -3.3341   GTACTATAATTAAAA                CTTC AATG GAGG                 TTCATGATGTTTTAT  44 112
 JI729_06880 1334588 .. 1334607 +  -9.4   -5.9218   GTAGCGACGACTAAA            GACTATCA ATTT TGATAGTC             TTTTTTTATTGTATA 100 27
 JI729_06885 1335327 .. 1335352 + -10.6   -3.3447   ACTTGTAATAAAAAA         CTAGAAAAGC TAAGGC GCTTTTCTAG          TTACATTTAATTATG  83 22
 JI729_06895 NONE
        dapB NONE
        mgsA NONE
       bshB1 NONE
        bshA NONE
 JI729_06920 NONE
 JI729_06925 1342402 .. 1342423 +  -8.8  -5.30616   CGAAATTAAGTAAAA           GAAGTTCC TCTTTT GGAACTTC            TTTTTATTTCAATAG 100 28
        panB NONE
 JI729_06940 NONE
        panD 1345489 .. 1345511 +  -8.5  -5.30686   ATTATAAGTAGAAAG           GCTATCTCT ATTGC GGAGATAGC           TTTTTTGTGCATCTT  93 34
        dinG 1348473 .. 1348497 +  -5.1  -3.88232   GCGTAAAAAATGTGG          GTAGGAGGAAT TTT ATTTTTCTTAC          TTCTTGTATACAAAA  63 82
 JI729_06955 NONE
 JI729_06960 NONE
        aspB 1350585 .. 1350604 +   -10  -5.41746   ATGTAATATAAAAAA            CCTCCCTA TTAA TGGGGAGG             TTTTTTTGACGGATT 100 56
        dnaD NONE
         nth NONE
 JI729_06980 1352549 .. 1352581 +   -15  -5.47431   AATGATAACAAAAAA      GAAGTCCGCTTCTC GTTAA GAGAAACGGACTTC      TTTTTTGTATATTAG 100 7
 JI729_06995 1357104 .. 1357137 + -19.8  -3.51411   TGATATAATAAAAAA     GAAGTCCCGTCTTC CATTTT GAAGACGGGACTTC      TTAATTTGAAAAAAT 100 33
 JI729_07000 NONE
 JI729_07005 1358113 .. 1358138 + -14.9  -5.02439   GTTGAGCAATGTAAA         TAACAAGAGGG AGAG CCCTCTTGTTA          TTTTTATGCTTCTGT 100 23
 JI729_07015 NONE
 JI729_07020 1359631 .. 1359651 + -10.5  -5.71983   GTAAATGATATGTTA            GAACTAGCG AAA TGCTAGTTC            TTTTTTTGTAATTGG 100 37
 JI729_07025 1360302 .. 1360312 +  -2.6  -2.75844   TTTAGTTAATGAAAG                 TTTT GGT AAAA                 ATTTGAGGTGAAGAA  41 97
        gpsB 1360712 .. 1360724 +  -4.9  -3.64599   TAGAAAAAAACGTTG                CAAAA TCT TTTTG                TTTCCACTATACTAA  57 73
        rnpB 1361170 .. 1361192 + -10.6  -5.42975   CTATGAAATAACTCA           GCTCTCCTTT GTT AGAGGAGGGC           TTTTTATTTGTATGA 100 54
 JI729_07040 NONE
 JI729_07045 1362713 .. 1362734 +  -8.9  -5.92337   TAATATAGAAGAAAA           TTTTCCTTT TTCG AAAGGAAAA            TTTTTTTTCGTGTAT 100 33
 JI729_07050 1364789 .. 1364806 + -11.3  -5.84432   AATTATAAGGAGAAA             GCTTGGC GCTT GCCAAGC              TTTTTTTCTATTATA 100 33
        ypwA 1366407 .. 1366422 +  -6.1  -5.60993   GAGTTATAAAAAAGA              GCTGC TTACTT GCAGC               TTTTTTTATAGGGGG  90 32
 JI729_07060 1366923 .. 1366936 +  -3.1  -6.11229   AACGTGATTAAAAAA               CAGAG GATC TTCTG                TTTTTTTATTTTGAT  88 30
 JI729_07065 1368070 .. 1368118 + -14.8   -5.8187   TCTTTTTTTGCGAAA CTCCAAAAGCGCGTCTCTCACTTG TAA CGAGTG-GTGGCG-GCTTTTGGAG TTTTTTTATTGCATA 100 273
 JI729_07070 NONE
        pbuX 1370068 .. 1370102 + -17.4  -4.66609   GGTAAGAGAAGCGTA     AAAAAGCAAGGTCTCA TTA TGAGACCTTGCTTTTC     TTTTTAAGTGGCATC 100 25
 JI729_07085 1375721 .. 1375755 +  -9.5  -3.54424   TTGTCCATGGTGAAT    CCCTCCTT-TCTATTA CTTA TGGTAGACAAGGAGGG     TTTAGAACAATAGAG  81 291
 JI729_07095 NONE
 JI729_07100 NONE
 JI729_07105 1377457 .. 1377476 +    -5  -2.62184   AAAACTTTGTATTTT            ACACATTG GAAA CAATGTGA             TAATATAACGACAAG  51 100
        ssrS NONE
        ssrS 1377893 .. 1377913 +  -9.8   -5.8187   GGGGCTATATAAAAA            CCTTACGT TTTAT ACGTAAGG            TTTTTTTGTTGCATA 100 32
 JI729_07125 1378992 .. 1379002 +  -3.2  -3.69605   TTTAAGTGACGAACA                 GCTT CTT GAGC                 TTGGTTTTCCATCCG  50 232
 JI729_07135 1380787 .. 1380814 +  -8.4   -5.4505   ATTTGTGTATGTAAT        GGCCGCTACTCT CTTA AGGGTAGGGGTC         TTTTTTGTTACCAAG  95 406
 JI729_07140 1381882 .. 1381914 + -10.2  -5.52384   GAATGGTAATCTATT     TATATAACCTTACGT GATA ACGTAAGGTTAT-TA      TTTTTTTAATAGGAG 100 103
 JI729_07145 1382816 .. 1382858 +  -2.9  -5.69262   TAAATAGTTTGGAAA GAGGGATGTTGCATAAGTCGA ACT TTGACTTG-GTGACA-CCTTC TTTTTGTTTTTGTAA  81 38
 JI729_07150 1383301 .. 1383344 + -21.6   -3.0263   GTGCCAGTAATTAAA TAAAATAAAAAAGATAGCCT ATAT AGGCTATCTTTTTTATTTTA TATTGAAAAAATGCT 100 27
 JI729_07155 NONE
 JI729_07160 NONE
 JI729_07165 NONE
 JI729_07170 NONE
 JI729_07175 NONE
 JI729_07180 NONE
 JI729_07185 NONE
 JI729_07190 1391358 .. 1391380 +  -8.5  -6.17268   TATATATGAATTAAA           CAAATGACC GAGTA GGTCGTTTG           TTTTTTTTATTATAG 100 19
 JI729_07195 1393068 .. 1393103 +   -15  -5.67283   ATAGGTAATGAAAAA    GAGATTGTAATTTGGT TTCA ACCAAACTACAATCTC     TTTTTTGTTTCAATT 100 89
 JI729_07205 1409125 .. 1409172 + -10.3  -3.74519   TTGCAGCGCAAATTT TTGGAT-AAAAAAGAATCCTTT TAAAT GAAGGATTCTTTTTTGAGCCAA TTTAATCACGATATT  89 18
 JI729_07215 1410184 .. 1410197 +  -2.3  -6.09196   CAAGCGTAACTTCAC               GCAGC CTGC GCTTC                TTTTTTTGTTTTGGA  85 32
 JI729_07235 1413106 .. 1413131 +  -8.4  -5.05601   ATGTAATAGATGAAA         GAGCCATTCCT TATAT AGGA-TGGCTC         TTTTTGTATGTGATA  93 35
 JI729_07240 NONE
 JI729_07245 1414090 .. 1414137 + -16.6  -3.51804   ATATGGAGAACAGTT GTCATGAAAAAACATCCAGAGA AAAT TCTCTGGATGTTTTTTAGTGTC TTGCTTCGTTTAGTT 100 19
 JI729_07260 1415686 .. 1415706 + -11.2  -4.78933   AGGATAGAAAAGTAA            GAGCCATC ATCTA GATGGCTC            TTTTGTATATTTTGG 100 26
 JI729_07265 NONE
 JI729_07270 1416785 .. 1416809 +  -5.7  -5.40072   AGAATAGAAAAGAAA          TAGTCGTAACG ATA TGTTGCGGCTG          TTTTTTTGGAAAAGG  85 54
 JI729_07275 1417446 .. 1417478 + -15.8  -3.15663   AGAAAAGGAAAAAAA      GACAAAAGTAGTGC GTTAA GCACTGCTTTTGTC      TTAATGAGGATAAAT 100 7
 JI729_07280 NONE
        actP 1419591 .. 1419617 +  -6.7  -5.86976   CATTAAATAAAAGAG         GAGCTTTTC GATAGATAA GAAAAGCTC         TTTTTTCTTTTGTCA  95 35
 JI729_07290 1421138 .. 1421160 + -12.8  -4.93877   TAAGTAGAGAGAGGA           GCGAGCTTTA ATA TAAGGCTCGC           TTTTGTTTAGTAGAG 100 41
 JI729_07305 1424706 .. 1424725 +  -7.2  -6.09196   TTAATAGTAAAAAAA            GAATTCTC GTAT GGGAATTC             TTTTTTTGTTTTAAA  95 37
 JI729_07310 1425703 .. 1425721 +    -6  -3.59979   TTAATTCTCTATTGA             CCTTAAAG TTA CTTGAAGG             TTTAAACTAAGAAAA  62 93
 JI729_07315 1427129 .. 1427150 + -11.7   -5.9003   CGATATGATAAAAAA           TCCCCTTAA GCAA TTAAGGGGA            TTTTTTTATTCCTTT 100 33
 JI729_07325 1428571 .. 1428594 +  -8.2  -4.05788   ATATAGTGAAAGTGA          TCCCGTCT-GA AAT TCTAGGCGGGA          TTTAGTTTGAGGAAA  81 35
 JI729_07330 1429076 .. 1429098 +  -8.5  -5.01535   AAATGTTTTAAAAAA           GGGCAATTC AAAAA GAATTGCTC           TTTTTGTGCTTATAA  93 74
        nfsA 1429924 .. 1429948 + -15.1  -4.56597   TGAAGTGAGTAAAGA          GGCAAACCTGT GAT GCAGGTTTGCC          TTTTTGAGAAGGAGA 100 38
 JI729_07355 1433295 .. 1433315 +  -4.9  -3.11218   GACAAAGTGCATAAA            TAAAAAATT TAT AGTTTTTTA            TATTAAGATGTTTCA  52 23
         hfq 1433525 .. 1433573 + -20.8  -3.07816   AAGCAGGCTATATCA ACAATAATGAAATAAGACACTC TTGTT GAGTGTCTTATTTCATTATTGC TTGCATGCCTCAACA 100 11
 JI729_07370 NONE
 JI729_07375 1435917 .. 1435927 +  -2.6    -3.273   AAAACACGAAAATTC                 TTTT AAA AAAA                 TATTAAATTTTATCA  45 70
 JI729_07380 NONE
 JI729_07385 1438555 .. 1438582 + -14.2  -4.68994   TAGGAATGAAGGAAA        GCTCCCCACTTG TATA CAATTGGGGAGC         TTTTTGGCTAATCGT 100 41
        fliY NONE
 JI729_07395 NONE
 JI729_07400 1442532 .. 1442572 + -11.5  -5.14563   TTTTAATTCGAGTTA TGTAAAA-AGGTCGTCAC TCCATT GTGACGACCTCTTTTATA  TTTTTTCGTAGAAGA 100 21
 JI729_07415 NONE
 JI729_07420 NONE
        flgK NONE
 JI729_07430 NONE
 JI729_07435 NONE
 JI729_07440 NONE
 JI729_07445 1449243 .. 1449259 +  -8.7  -3.21498   GTCTGGAAACAGATT              CCCCTTT TAA AAGGGGG              TCTATTCCTTCGTTT  73 48
        flgB 1450115 .. 1450129 +  -3.4  -3.02202   ATGCAAATACGACGG               CGGCTC CGG GGGCAG               ATTTATATGAGCGTC  44 144
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI 1455336 .. 1455360 +  -9.4  -6.28401   ATACAGCATATAGTA          TAAGGCCTCT GCCCA AGAGGTCTTA          TTTTTTTGTTTTTTA 100 23
 JI729_07485 1455869 .. 1455886 +  -2.7  -3.07895   ATGAATGGATGAGGT             GAATGTA GTGA TACAGTC              TGTATTACCGGTGCA  43 29
 JI729_07490 NONE
 JI729_07495 NONE
 JI729_07500 1458783 .. 1458799 +  -2.3  -3.12606   AGATGAAGTATTAAA              TGAAGTT GTA AACTTAA              TTAGATAATATATCG  42 1
 JI729_07505 1459187 .. 1459206 +  -2.2  -4.07568   GAGTTATTGAAAGGT            TCTTAAAA GCAC TTTTTAGA             TTTTGAGAGAGGACC  52 20
 JI729_07510 1459916 .. 1459948 + -11.6  -3.77119   AATAAAATGAATCGT      TCGACTATCTATAT TTTTT ATATAGATAGTTGA      CTTTTTCTCTTTTAT  95 50
 JI729_07515 1461135 .. 1461166 +   -14   -4.9181   TGTTAGAGAGAGGAA      GGAATTAGCCA-ATG CTA CATATGGCTAATTCC      TTTTTAGTATTCTAT 100 237
 JI729_07520 1462537 .. 1462575 + -13.5  -4.54047   AATTTGGGTACAAAA   TAAAAGGGAGATACATA GTTTA TATGTATTTCCCTTTTG   TTTTGTATGGAATCG 100 44
 JI729_07535 NONE
 JI729_07540 NONE
        fliM NONE
        fliN NONE
 JI729_07555 NONE
 JI729_07560 1468546 .. 1468556 +  -3.2  -2.94416   AAACAGTCGCCTGAA                 GCGT TTG ATGC                 TATGTGATAGGAGTC  44 27
 JI729_07565 NONE
        fliR NONE
        flhB 1470699 .. 1470709 +  -3.2  -4.44046   ATAATAGCGCGTTTG                 GAGG AGA TCTC                 TTTGTTTAAGATAGA  60 37
        flhA NONE
        flhF NONE
        flgG 1474951 .. 1474969 +  -8.9  -4.89562   AATATTGAGATAGTG             GACTCCT AATAA AGGAGTC             TTTTATTAATTTTAA  93 28
 JI729_07595 NONE
 JI729_07600 NONE
 JI729_07605 NONE
 JI729_07610 NONE
 JI729_07615 1477867 .. 1477903 + -14.7  -3.68988   CTAAAGGTAAACATA    GAAGGAAGAAAAGTTGA AAG TTGGCTTTTCTTCCTTC    TTCTATTACATCCCC 100 9
 JI729_07645 1482353 .. 1482379 +  -3.8   -5.1485   GAAAAGGAGACAACA         GCATGAAAAAAT TAA GTTTTGTTATGC         TTTTTCTATTAGTTG  70 150
 JI729_07650 1482889 .. 1482923 + -18.9  -5.45652   AAATAGATTTATAGT     TTAAAAGGCTGTCGT GCATA ACGACAGCCTTTTAA     TTTTTTGTTGCAAAT 100 35
 JI729_07660 NONE
 JI729_07665 NONE
 JI729_07670 NONE
 JI729_07675 NONE
 JI729_07680 1489778 .. 1489800 +  -7.8  -4.96762   TAAATGAGAAAAAAA           GGAATCCA TATTTCT TGGATTCC           TTTTTCTAATATATG  88 38
 JI729_07690 NONE
 JI729_07695 1490670 .. 1490692 +  -6.3  -6.01369   AAGAATATCACAAAA           CGTGCTTTC CTAAT GAAGGCATG           TTTTTTTGTTGTTTA  95 68
 JI729_07700 1491924 .. 1491944 +  -7.6  -4.46212   ATTATGTAAACAAAG            GGGCACTT ATGAA AAGTGCTC            TTTTGTAATACAGGA  82 53
 JI729_07705 NONE
 JI729_07710 1493058 .. 1493079 + -13.1  -6.02919   TGAATAGATAAGTAA           GGAAGCAAC TTTA GTTGCTTCC            TTTTTTTATTTATAG 100 34
 JI729_07730 1495644 .. 1495672 + -14.7  -5.06816   CTAATTAATATAAAA        GGAGTTCAAGGTT TTT ATCCTTGAACTCC        TTTTTGTTAAGCAAT 100 33
 JI729_07740 NONE
 JI729_07745 1499438 .. 1499467 + -18.1   -4.8622   TAAAGAAATAAAAAA       GAGACTGCCTAAA ACCA TTTAGGCAGTCTC        TTTTTCGTTAAGAAC 100 30
 JI729_07755 1501804 .. 1501818 +  -3.6  -4.21908   ATCAAAAGTGGTAAT               TGATAG AGA TTATCA               TTTTCAATGATCGTA  60 170
        fbpA 1502037 .. 1502082 + -19.4  -3.75015   AGCTATATAGATTAG TAAAAGGAGAGCTGGTTACG ATTTTG TGTAACCAGCTCTCTTTTTA TTTCGTAGAAATTAT 100 39
 JI729_07775 1504184 .. 1504203 +  -7.9  -4.84262   GCTATAAAGTAAAAA            GGCTTCA TTCTAC TGAAGCC             TTTTATTAATTGTTA  85 29
 JI729_07785 NONE
 JI729_07790 NONE
 JI729_07795 1508238 .. 1508271 + -11.9  -4.96848   ATGTATAAATAAAGA     TAGGGCATGCATCAT TTTA ATGATGTGTGTCCTA      TTTTTGTGTGGAAAA 100 29
        nhaC 1510109 .. 1510135 + -16.8  -6.28401   ATCATAAAATAAAAA         TCACCTTCTACA ATA TGTAGAAGGTGA         TTTTTTTATTTTTTA 100 34
        fumC 1512837 .. 1512864 +  -9.2  -5.28683   AGAGTAATAGAAAAA        GCCAGGGTTCTG AGTA TAGAATCTTGGC         TTTTTTGATGTTCAT 100 34
 JI729_07825 1513725 .. 1513748 +  -3.9  -5.37345   GGATAAAAAGTAAAA          GGTGTTTTC TTATAC GGAAACATC           TTTTTTGTAGTTAAA  76 73
 JI729_07830 NONE
 JI729_07835 1516371 .. 1516398 + -13.6   -5.4833   GTTAAATAGAAAAAA        TGTCCCTAAGTT ATTA GACTTAGGGACA         TTTTTTCTTAAGTGC 100 36
 JI729_07845 1517978 .. 1517988 +    -4   -4.0162   GACCTCTCATTTAAT                 TTGT ACT ACAA                 TTTGTAGTGTGAAAG  57 100
 JI729_07850 NONE
 JI729_07855 1519265 .. 1519281 +  -6.6  -4.08216   TTTTTTAAGAATAAA              CACTAC TCATT GTAGTG              TTTTAGGGGGAATAA  72 46
        ccdA NONE
 JI729_07865 NONE
 JI729_07870 1521287 .. 1521319 +  -7.7  -5.49234   CGAAAAAATAAAAGA      TAGCCATTAACGGAT ATT ACCCGTACATGGCTA      TTTTTTATTACATAT  95 30
 JI729_07880 1523370 .. 1523389 + -10.8  -5.22312   ACGGTATAAGAAAAA            TGAGGCTA ATTG TAGCCTCA             TTTTTTCATGTACAT 100 32
 JI729_07885 1524772 .. 1524791 + -13.6  -5.93252   ATTATATGAGAAAAA            CCTTCCGC AATT GCGGAAGG             TTTTTTATTTTTCGA 100 32
 JI729_07910 NONE
 JI729_07915 1529821 .. 1529851 +  -4.2  -5.40464   ATTCTCATGTGAAAA      GAATGAACTTCTGC ACTGA GCAG--GTTCATTC      TTTTTGTTTATACTA  78 85
 JI729_07920 1530863 .. 1530883 +    -4  -3.19293   AAGAAAAGGTAAAGG            GAGGTTCA TCAAT TGAACATC            TTCAATATTGCAATT  49 51
 JI729_07925 NONE
 JI729_07930 1533140 .. 1533160 +    -9  -5.64421   TGTTTAATGTGAAAA            GGTGTGGC TTAAT GCCATACC            TTTTTTGTTTGAAAT 100 34
         cls 1535459 .. 1535479 + -12.6   -4.7254   TGATGGATTAGGAAA            GGGTGCCT ACAAA AGGCACCC            TTTTTGGTGGGAAAT 100 41
 JI729_07950 NONE
        aspA 1539357 .. 1539374 +  -9.1  -5.64421   GAAAAATTAAAAGAA             GAGGGGG ACAA TCCCCTC              TTTTTTGTTTACAAT 100 31
        malS 1541146 .. 1541169 + -11.8  -3.94846   GAATATAGAAAAAAA          GCCCGTTTAT AACA ATAAGCGGGC           TTTCGCTTTTACTAC 100 33
 JI729_07965 NONE
 JI729_07970 1543438 .. 1543463 + -13.5  -4.67982   TGGAGATAGAGTGAA         GAAGATGCTTA TAAA TAAGCATCTTC          TTTTGTTAAATCAAC 100 27
 JI729_07975 1546759 .. 1546788 +   -13  -5.58179   ATTTAATATAAAAAA       GCTATGCCTTCA AATTTA TGAGGGCATAGC        TTTTTTGTTGTAATA 100 35
        asnA 1548712 .. 1548746 +  -2.3  -5.60993   TGTTTTAATAGAAGT    GAGGG--AATAGCTTAA ATA TAGAGCTATTTTCCCTC    TTTTTTTATAAAACA  74 33
 JI729_08000 NONE
 JI729_08005 NONE
 JI729_08010 1554417 .. 1554435 +  -9.6  -5.14477   GGAGAAGTAAGAAAA             GCTTGGAG AGA TTCCAAGC             TTTTTTACGTATGTG 100 31
 JI729_08020 1556492 .. 1556530 + -11.9  -3.06679   AGCAGGTTTCAAAAA   AGAAGACTAAGCCCTAA AGAAA TTAGGACTTAGTCTTCA   TTAAATACAAATGTT  93 192
 JI729_08030 1558202 .. 1558234 +  -9.9  -5.63517   GTAAATAAGAAAATG      GCCCTGTGAATTGGT GAA ACCAAATTATGGGGC      TTTTTTATTTAGAAA 100 37
 JI729_08035 NONE
 JI729_08040 1560657 .. 1560697 + -11.4   -3.2614   GATTAGTAGAAGATG CGTAAAGAAAAACAGGCTG CTAT TAGCCTGT-TTTCCTTACG  TTAGTATGAAAAGTC  93 21
 JI729_08050 1564021 .. 1564047 + -12.4  -4.87786   AAATTAAATGAAAAA         GAGGTTCTAGTT ACT GACTAGAGCCTC         TTTTTATACACTTAA 100 34
        hflX 1566975 .. 1567013 +   -14  -3.02856   GTTTTGCAATTTAAT   GTAAGAGGCAACCCAGTT TGT GATTGGGTTGCCTTTTTC   TATAATGTTTTACTG 100 27
 JI729_08065 NONE
        cysK 1569337 .. 1569368 +  -8.9  -4.77775   TAAAAAGGATAGAAA      CACCTTAATAGTG AATAGC TGCTATTAAGGTG       TTTGTTTTATGGAAT  91 38
 JI729_08075 NONE
 JI729_08080 NONE
 JI729_08085 1571890 .. 1571915 + -17.7  -5.63517   TACCGCGATATTTAT         CGTCCCTACGT ATTT ACGTAGGGACG          TTTTTTATTTAGGGC 100 481
 JI729_08090 1573538 .. 1573578 + -17.9  -4.64361   TTGGCATTATATAAA  TAGAAAGGTAGCGTATCAT ACA AAGATACGCTACCTTTTTA  TTTTGCTCTTTTTTG 100 27
 JI729_08100 1574868 .. 1574923 + -12.3  -3.11786   ATTGTGTATTCTAAA TAAGAGGAAAAGAGTCTGATTCATA TATTAC TTTGAATCAGACTCTTTTTGTTTTA TATGTATTGGATATA 100 23
 JI729_08105 NONE
 JI729_08110 1576479 .. 1576500 +  -6.6  -5.75538   GAAATAAAGAGAAAA           CCTCTAGT ATTTAA ACTGGAGG            TTTTTATTTTTTGAA  95 34
 JI729_08115 1577595 .. 1577623 + -10.5  -4.47707   CTTAAATCTACTGAA        TAAGAATCTCTTT TGA AAGGGGATTCTTA        TTATTTTTCATAAAA 100 120
 JI729_08120 1578054 .. 1578080 +  -7.3  -5.54403   TATCAAAAATAAAAA         CGCATCGTATT AAAAA AGCACGATGCG         TTTTTATTATTTTTT  90 156
        ilvE NONE
        ilvB NONE
 JI729_08145 NONE
        ilvC NONE
        ilvD NONE
        ilvA 1587700 .. 1587723 +  -6.8   -3.9777   TTTTCCCTGTATCAT          CAATTTCTAC ATCA GTTGAAATTG           TTTGTAAATATTGAA  68 420
 JI729_08175 NONE
 JI729_08180 1590569 .. 1590591 +    -7  -4.77567   ATAGATAATAAGTAA           CCAACTTCAT CTA AAGGAGTTGG           TTTTATTATGAAAAT  80 26
 JI729_08185 1591963 .. 1591997 +   -16  -3.71649   TAACTAAGTGAATAA     AAAAAGGATGAAGCAA TCA TTGCTTCATCCTTTTC     TTTAAAATTTAAGAC 100 38
 JI729_08195 1593903 .. 1593932 + -13.1  -4.64861   AATAAATGAGAAAGA       TAATCCCAAACTG TTTG TAGTTTGGGATTA        TTTATTTTACAGAAA 100 32
 JI729_08200 1594845 .. 1594857 +  -4.9  -3.99878   TCTAAATTTTTCTGC                TTTAG AAC CTAAA                TTTGCTGTTCTGTCT  61 36
 JI729_08205 1596540 .. 1596566 +  -9.4  -5.27335   AATTTTAGAAAAAGA         GAACGCCAACTT TTA GGGATGGCGTTC         TTTTTCTTTAAAAAA 100 89
 JI729_08210 NONE
 JI729_08215 1597540 .. 1597585 +  -5.7  -2.50994   TTATCTTTTGACTCT TAATCTTTAATAAGTTACTAT AATG GTGGTAACTTATTAAAGGGAA CTTCATAGAGTTGAA  54 23
 JI729_08220 1598945 .. 1598966 + -11.7   -5.4505   GTGGCAGTTGAAAAA           GCTATCCTT TTAA AAGGATAGC            TTTTTTCTTGAACGA 100 49
 JI729_08225 1600714 .. 1600734 + -11.3  -5.03314   AATAAATACAAAAAA            CCTTACTTT TTA AAAGTAAGG            TTTTTTACACATGAA 100 36
 JI729_08235 NONE
 JI729_08240 1603211 .. 1603221 +    -4   -4.1347   TTTCTTTTATATGTC                 GTAA TTT TTAC                 TTTGTATCATTGAGA  59 44
 JI729_08245 1604148 .. 1604176 + -13.3  -4.94972   CATTTCATCCAAAAA        GGGTATTCCAAAT TAA AATTGGAATACCC        TTTTTCATTATCCTA 100 49
 JI729_08255 1606939 .. 1606968 +  -8.6  -5.88565   TTCGTATAATAAAAG       GGGTACTCCAAG TTTAAT TTTGGAGCACCC        TTTTTTTATTATCCG 100 47
        panE 1609736 .. 1609763 + -10.8  -6.12458   TGAAAAAATAAAAAA        GATAGCAATATA TAAG TGTATTGCTATC         TTTTTTATTTTTTTG 100 38
 JI729_08270 1612188 .. 1612215 +   -10  -5.07275   AAGAAGATTTTTTAA        GGATAGTTTCGT GAAA ATGAAGCTATCC         TTTTTGTGTATATGC 100 39
        nheA NONE
        nheB 1615226 .. 1615251 + -14.1  -4.39889   GATGAATGATTTGAA         GCTCCTGTTCA GTTG TGAGCAGGAGC          TTTTGATATCCTTAT 100 72
        nheC 1616364 .. 1616390 +  -6.7  -5.70829   GAAGGTGTGGCAAAG         TAAACAGTGGA CTAGT TCTGCTGTTTA         TTTTTTTATCCTGTT  95 23
 JI729_08290 1617236 .. 1617274 + -10.7  -3.95378   AAATAAATATGTAGA   TAAAACGAGAAATAA AAAAGTTGA TTATTTCTCGTTTTA   TTCTTTAAAATCTGC  95 35
 JI729_08305 1619691 .. 1619728 + -15.2  -3.78018   ATTAAATTGAATAAA   TACCCCTTATAAATAG TATCTT CTGTTTATAAGGGGTA    TTTGAATAGTTTTTA 100 78
 JI729_08310 1620950 .. 1620991 + -21.3  -4.87592   CAAAAAGATTAGAAA TAAAAGGCGTTCTCAAGAT GTTA ATTTTGAGAACGCCTTTTA  TTTTGTTATGTATGA 100 29
        deoC 1621941 .. 1621974 + -10.5  -3.84246   TTAATGAAGTCAAAA     GCGATAGATACAC AAAGTAAA GTGTATCTATTGC      TTTAATAATTGAAAA  89 44
 JI729_08320 1623195 .. 1623209 +  -2.2   -2.5844   GCAACAATCGTTGGC               TTATTA TTT TAATAG               ATTCGTATAATATAA  39 14
 JI729_08325 NONE
 JI729_08330 1624982 .. 1625012 +   -12  -5.79595   AAAATAAATTGAAAA       GCCATTCTACAATT ATT ATTTGTGGAATGGC       TTTTTTATTTTCAAA 100 34
 JI729_08335 NONE
 JI729_08340 1625987 .. 1626030 +    -9   -3.9504   AATTAGAAAAGGCAA TAAACAGAGCGAGAATTTCT ATAT AGGAAATCCAGCTCTGTTTA TGTTTTATTGAAATT  82 0
 JI729_08350 1627788 .. 1627842 + -13.2  -4.64676   ATCACTAATTTATTT GAACTTTATCTCGAATCGTGGA CAATTAAAAAA TCCATGATTCGGGATAGGGTTC TTTTCTTCGAAATAC 100 50
 JI729_08360 1630502 .. 1630524 + -12.8  -4.06335   CCAGAATAATAGGAA           GCAGTTATCC TAT GGATAGCTGC           TTATTCATTTTTGTT 100 32
        topB 1633565 .. 1633600 + -14.3  -5.35815   TGAGAATTAATTTGT    TAAAAGAGCATGACA TAAAAT TGTCATGCTCTTTTG     TTTTTCTTTGATATA 100 31
 JI729_08375 1635160 .. 1635204 + -21.9   -3.1916   GTTGTATGTAATCTT TCCATAATAAAAAACGTCCCA AAA TGGGACGTTTTTTATTATGCA TATTGCCGTTTTTTC 100 175
 JI729_08385 1637171 .. 1637192 +  -9.5  -5.28755   TAGTAAATGGAAAAA           CCAACATGG ATGA CTATGTTGG            TTTTTTAGTCTATTT 100 48
        brnQ 1638755 .. 1638776 +  -3.8  -5.85737   GGTTAAATAAAAAAA           GTTATAGA CTTGTT TCTATAGC            TTTTTTTGTTACTAT  87 35
 JI729_08395 1639269 .. 1639292 +   -14  -5.38958   GGATATTTTTAAAAA          GGTGTTACGT TATT ACGTAACACC           TTTTTATTTATGCAT 100 46
 JI729_08400 NONE
 JI729_08405 1641884 .. 1641922 + -21.3  -4.50159   TCGTAAAAAGTAAGA   CGTAAGAAAGAGCCTGC AAACA GTAGGCTCTTTCTTACG   TTTATTTCAATTCAA 100 28
 JI729_08415 1643803 .. 1643828 +  -6.3  -5.04222   GCAGAATAAAAAGAG         GTGTCTCATATA TCA TA-ATGGGACAC         TTTTTAATTTACTTA  81 32
 JI729_08420 1644346 .. 1644358 +  -3.5  -4.48967   GAAAAAATGAATGCT                TAAAT CAT ATTTA                TATTTTTTTATCATT  62 23
 JI729_08425 1645048 .. 1645067 +  -2.2   -2.8237   TTGAAGGTATGCAAT            GTAATA-CC GAT GGATATTGC            TAATTCGCTTGTTAT  40 3
 JI729_08430 1645753 .. 1645778 +  -9.1  -5.32882   AATATGTAACGAGAA         GGAAGCTGT GCTTAAAA ACAGCTTCC          TTTTTTGTAGTGGTG 100 48
 JI729_08435 NONE
 JI729_08440 1648957 .. 1648980 +  -9.7  -5.85244   AATGAAAATAAAAAA          GCAATCCAA AATAAA TTGGATTGC           TTTTTTATTTTCATT 100 77
 JI729_08450 1651628 .. 1651640 +  -6.3  -2.81564   ATAATAAGTATAAAT                CGTAA TTA TTACG                CTTTGAATACATTTG  58 78
 JI729_08455 1652614 .. 1652637 + -11.2  -5.01497   TAATTAAGGGGAAAA          GACTAACTTA AAAA TAAGTTAGTC           TTTTTGTATGGTCAT 100 34
 JI729_08460 1654104 .. 1654137 + -14.1  -4.51743   GAATTTTCTGTTGTT     TTTGTATAAAGAGGG GGGA CCCTCTTTATACATA      TTTCTTTCATACTCA 100 44
 JI729_08465 NONE
 JI729_08470 NONE
 JI729_08475 1656551 .. 1656564 +  -3.1  -3.28256   TTAAAGTATACTTTG               GAGTA TGTA TGCTC                ATTTGTTTAAGTGTA  47 67
 JI729_08480 1657539 .. 1657566 +  -7.8  -5.45802   TATACAAAATAAAAA        TCCCTCTTTTAT ATTC GTTAAAGAGGGA         TTTTTATTTTGAAAA  95 52
 JI729_08490 1659053 .. 1659065 +  -4.9  -4.90002   ATGAGATTTTACACA                TTTCA CGA TGAAA                TTTTGTTGTATATTA  72 15
 JI729_08495 NONE
 JI729_08500 1659842 .. 1659889 + -21.2  -3.90586   AGGAAAAGTTAAGAA TAATGATAAGTAAGAATTCATG TTTA TATGAATTCTTACTTATCATTA TTTATGCAATACTCT 100 29
 JI729_08505 NONE
 JI729_08510 1661621 .. 1661643 +  -8.5  -6.32017   AAATAAATAAAAAAA           CTGAGAGTC TAATC GACTTTCAG           TTTTTTTTATTTGTT 100 35
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 1668080 .. 1668103 +  -7.4  -5.83226   CAATAATTGTAAAAA          TAGCTACGCC TAAT GGTGGAGCTA           TTTTTTTGTTAGATT  95 51
 JI729_08535 NONE
 JI729_08540 NONE
 JI729_08545 NONE
 JI729_08550 1673700 .. 1673730 +    -7  -5.69262   TTGATTTTTTAAAAA       GCATCCATTCTT AACAAAA AAGAATGAATGC       TTTTTATTTTTATCC  95 12
 JI729_08555 1674150 .. 1674162 +  -2.7  -2.87463   AGGTTATAAACAATT                TAGCT AGA AGTTA                TGTATAGAGAAAATT  41 56
 JI729_08560 1674663 .. 1674685 + -12.8  -4.99035   GGTCAATAGTAAAAA           GCTCCGTTTG TGA TAAACGGAGC           TTTTTGTATAAGTGA 100 32
 JI729_08580 1677771 .. 1677811 + -16.6  -5.77734   TCGCTACATAAGTAA GACTGTTTGTTGTTA-CTA ATTT TAGATAACAACAAACAGTC  TTTTTATTTTTATTT 100 63
 JI729_08585 1678591 .. 1678617 + -12.4  -5.64274   TAAATAATTTAAAAA         GGTGAACAGG AATATAA CCTGTTCACC         TTTTTTTATACGTAA 100 34
 JI729_08595 1680815 .. 1680840 + -14.1  -4.98857   TTTGTATAGAGAAAA         GGCTTTCCAAG GAAA CTTGGGAAGCC          TTTTTATAGTTGAAT 100 63
 JI729_08605 1683645 .. 1683681 + -16.1  -4.59109   GGGTGCATTATAAAA    TGAATCATCAGTGGGAT TTT ACTCCACTGATGATTCA    TTTTTAAACAATATA 100 28
 JI729_08610 NONE
 JI729_08615 1685467 .. 1685508 + -24.9  -3.58536   ATGCCAAATCATGAA GAGAAATAGTGTTAGAAGG AGAA CCTTCTAACACTATTTCTC  TTTAAAAATGCATTT 100 17
 JI729_08620 1686506 .. 1686543 +  -9.3  -5.19003   AATTTAACTTTAAAA   GAAGGGATATCTATTCT GTAA GGGGTAGATGTCCTTTC    TTTATTTTTTGTATT 100 47
 JI729_08625 1687661 .. 1687689 + -14.8  -5.38958   AATAATATAAAGCAG        TAAGACTGTCCT AATTA AGGACAGTCTTA        TTTTTGTTTATGAAT 100 39
 JI729_08630 NONE
 JI729_08635 1689010 .. 1689043 +  -9.6  -4.99645   AGCAATAATGAAAAA     TAGGACTCCACGCA ATATAA TGCTAGGAGTCCTA      TTTTATTTATAAACT 100 33
 JI729_08645 1690530 .. 1690584 +  -6.1  -4.12532   GTAAAAGCCCGATTG GTGAAGGCTAATAATCAGTGGGGAT GAACAAA ATCCTCACTGATTAA-AG-TTTCAC TTTATATATGAACCG  70 177
 JI729_08650 NONE
        thrC NONE
 JI729_08660 1694729 .. 1694751 + -12.8  -3.75153   ATATTGGATCGTAAA           GAAAGCTGGC ATG GCTAGCTTTC           TTTACGTTGCAAACC 100 27
 JI729_08665 1695187 .. 1695217 +  -9.8  -5.03145   AACTTTTAATACTCC       AAACAGAGCTAGCA AAA TGCTAGCTCTATTA       TTTTTTGCCACATTC 100 144
 JI729_08670 1697806 .. 1697823 +  -8.5  -3.14211   GGGTTTAAGTAGTAA             CCTTACA AAAT TGTAAGG              TTAGTGAAAGGAAAT  70 252
 JI729_08675 1698910 .. 1698927 +  -9.9  -6.09133   CGAATAATAAAAAAA             GATTGGC TTTT GCCAATC              TTTTTTTTTGGAATG 100 34
 JI729_08680 NONE
 JI729_08685 NONE
 JI729_08690 NONE
 JI729_08695 NONE
 JI729_08700 1703991 .. 1704022 +    -6  -5.16572   AAGTGTAATAAAAAG      CCGGAGAAACAT CGTTATAA ATGTTTTTTCGG       TTTTTTACGTTAAAT  79 52
 JI729_08705 1704817 .. 1704835 +  -7.5  -5.67283   AATTGTGATAAAAAA             GAGTGAA GTGAA TTCACTC             TTTTTTATTTGGATT  95 39
 JI729_08710 1705437 .. 1705462 +   -12  -4.88405   ACTTTATGTTTGAAA         GAGGTATACC AATTAA GGTATACCTC          TTTTGTTTAACCATT 100 41
 JI729_08715 NONE
 JI729_08720 NONE
 JI729_08725 NONE
        asbD NONE
 JI729_08735 NONE
 JI729_08740 1712818 .. 1712837 +  -5.7  -5.67063   TGTGAAATGATGTGA            GAGTCTC GTTTTA GAGGCTC             TTTTTTTATGGTAAA  93 41
 JI729_08745 1713152 .. 1713173 + -11.7  -6.15259   TAGAAGGTTATAGGA           GAAAGGAAG GATT CTTCCTTTC            TTTTTTTTTCAATTA 100 44
 JI729_08750 1714607 .. 1714643 + -10.3  -4.00348   CTTCATAATTTGTAA    GAGAATTGCATGATGTT TTG AGAAACATGCAATTCTC    TTTCGTTCATTAAGA  93 33
 JI729_08760 NONE
 JI729_08765 1717033 .. 1717075 + -12.5  -3.20751   GAGATTATATAGGAA GTAAATAAGTCTAGTAATAT AAGA AT-TTACTAGGCTTATTTAC TATTAAGTTGTTAAA 100 50
 JI729_08780 1719305 .. 1719329 + -14.5  -5.00642   ATGCTAATGAAAAAA          GGTTGTTCTTT TTA AAAGAACAACC          TTTTTATGTGAATTA 100 34
 JI729_08785 1720619 .. 1720639 +  -9.8  -5.24799   TTAAGCAATGAGAAA            GAGCATCT GTAAA AGATGCTC            TTTTTATATTTATCG 100 37
 JI729_08790 NONE
 JI729_08795 1721417 .. 1721439 +  -6.4   -5.5762   TTAACATATAAAAAA           GAAGCTAA ATGAAGA TTAGCTTC           TTTTTTATGTTTCAT  90 37
 JI729_08805 NONE
 JI729_08810 1724877 .. 1724903 + -13.9  -4.58644   TCTTTTAAAAGACTG         TAAGAGGACCA TTAAT TGGTCCTCTTA         TTTTGGTTATTAGTT 100 76
 JI729_08815 1726049 .. 1726099 + -21.1  -2.99813   TTTATTAAAAGAATA GCCATATTAAAAAAACATCTCATA TGAA TATGAGATGTTTTTTTA-TATGGC TCTGTCGTATGTAAT 100 25
 JI729_08820 1726579 .. 1726596 +  -8.5    -4.128   ATCAAAAAATAAAAA             TCCCTAT AAAG ATAGGGA              TTTATATATCGGCAT  81 168
 JI729_08825 1727371 .. 1727413 +   -21  -3.54146   AAAAAAATTCTAAAT AAAAAGCACTGTTTTAGCTA ATG TAGCTAAAACAGTGCTTTTC TCTTTGATTGAACAG 100 199
        rsgA 1730006 .. 1730037 + -13.2  -3.61601   ACAACATAAAAAAAT      GTAAAAACCAAAGG GGCC CCTTTGGTTTTTTC       TATTTGTAAATTTTA 100 22
 JI729_08850 1732200 .. 1732241 + -13.9  -4.84311   AAGTTTAATAAAGAA CAGACTACCC-CTAGTAGCA TTA TGACACTAGAGGGTAGTCTG TTTTATTATGTAAAA 100 33
 JI729_08855 1732695 .. 1732718 +  -7.4  -5.73978   GGGAAGTTCTTTTAA          GGGGAGTGGT ATAA GTCACTCTCC           TTTTTTATTTGTGGT  95 26
 JI729_08860 1733385 .. 1733422 + -17.4  -5.11937   ATGATTGTGAATGAA   CATAAAAAAGCATCCA ATAACA TGGATGCTTTTTTATG    TTTTTTGAAGTTGTT 100 27
 JI729_08870 1735161 .. 1735183 +  -9.3  -6.04378   TAAATATATAGAAAC           CCATTGAAA AATTA TTTCAATGG           TTTTTTTTATGATTT 100 44
 JI729_08875 1735711 .. 1735734 +  -5.4  -6.08342   GGTAGACGTAATGAA          AACAACAATA CATA TATTGTTGTC           TTTTTTTGTTTGTTA  93 36
 JI729_08880 1736870 .. 1736895 + -14.9   -4.6902   AAGTAGTAAGAAAAA         GAGATGCATCA CATG TGATGCATCTC          TTTTTAGAATTATAA 100 35
 JI729_08895 NONE
 JI729_08900 1740501 .. 1740526 +   -12  -4.93318   AATACATATGAAAAA         GAAGAGCTGT AAAAAA ACAGCTCTTC          TTTTTATGCATTATG 100 14
 JI729_08910 1742552 .. 1742576 +  -7.2  -5.25803   GAGGAGTGTGTGAAA          TAAGTCTGCG TAAAT TGCAGGCTTA          TTTTTTATGAGCATT  86 23
 JI729_08925 1744678 .. 1744709 + -15.4  -3.41602   GAGAAGAAAGAGTGA      GTAAAGCACTATGC GTAC GCATAGTGTTTTAC       TTGTGGTAAAATAAG 100 26
 JI729_08930 1745450 .. 1745488 + -19.3   -3.3287   ATTACAACGATAGAA   TAAATAAAACCGAGAAG AATGA CTTCTCGGTTTTATTTA   TTCGTATGAATTTTT 100 23
 JI729_08940 NONE
 JI729_08945 1748139 .. 1748153 +  -2.2  -2.53249   AAAATAATCAGAATC               TTTTGT ATA ATAAAA               ATATATTATATAGGA  39 47
 JI729_08950 1749870 .. 1749901 +   -14  -4.03234   AAAAAAATAGTATAA      TAAAAGATGAGTGA ATTT TCGCTCATCTTTTA       TTTGTATAAGGAGGA 100 31
        fosB NONE
 JI729_08960 NONE
 JI729_08965 1751535 .. 1751549 +  -8.5  -5.56568   AATAAATGTAAAAAA               GGCCG CAAAA CGGCC               TTTTTTTGGTGGTAT  95 36
        cotH 1753415 .. 1753437 +  -7.8  -6.30182   GGATTAATTTTGAAA           GAGATTGAGA CGT TATCAATCTC           TTTTTTTTTGTATAA 100 34
 JI729_08980 1754169 .. 1754182 +  -3.7  -4.10164   TAAAATGAAGATATT               GGCAG ATTG CAGCC                TTTATGTAATAATGG  57 65
 JI729_08985 1754838 .. 1754857 +  -7.2  -6.11392   AAGCAGCGCGTTAAA            GTCAATGA TAAT TCATTGGC             TTTTTTTGTTTGTTT  95 27
 JI729_08990 1756322 .. 1756339 +  -7.7   -5.1634   AACATAAGCTTTTAA             GGCAGAG AGCA CTCTGTC              TTTTTCTATGTTTAT  90 34
 JI729_08995 1757599 .. 1757636 + -20.1  -5.21709   TTTAACGATAAGAAA   GCTGCTCTAGCATAGTT ATAC AACTACGCTAGAGCAGC    TTTTTTGCTATGAAA 100 36
 JI729_09000 1758686 .. 1758700 +  -3.6  -3.29576   GATGGGGTGGTAGGT               TATGTT TCG AGCATA               TATATTATTAGGTTT  49 28
 JI729_09005 1759546 .. 1759568 +  -8.5  -5.26316   AATATGTATTTAGAG           GAGCCGATT GATAA AATCGGTTC           TTTTTTGTGGACTAA  93 15
 JI729_09010 1760234 .. 1760274 + -11.4  -5.14965   GGAAATGGTTTTAAA ATG-AAAAGCGGACACCTA AAAA TAGGTGTCCGCTTTTATAG  TTTTTTCATCCACAT 100 77
         cls NONE
 JI729_09025 1762235 .. 1762260 +  -7.6  -5.47821   AGTTTGCATGAGAAA         CTAAGGCGAA ATGGTA TGCGCCTTAG          TTTTTTTACGTCCAT  95 30
 JI729_09030 1762639 .. 1762662 +  -8.2  -5.56673   TAAAGTAATAATAAA          GCTTCCTC TCATATAT GAGGAAGC           TTTTTTGTTGTAAAT  95 38
 JI729_09035 1763360 .. 1763373 +  -8.1   -2.7185   ATATTAAAAAAACCA               TCCCG AAGT CGGGA                TGGTTAAAAGATGAT  68 34
 JI729_09055 1767153 .. 1767190 + -17.4  -3.05343   AACGATAGAGTAACA   TACAAAAGCCATCTAA ATTATA TTAGATGGCTTTTGTA    TGTTACGGGTATAAA 100 28
        brnQ 1768930 .. 1768951 + -13.1  -5.40072   AAGTGAATTACAAAA           GAAAGGTGC TTAG GCACCTTTC            TTTTTTTGAAGGGGA 100 13
        csaA NONE
 JI729_09070 1770214 .. 1770224 +    -4  -3.22777   TGAGACAAAAGTAGG                 TACA AAG TGTA                 TGTTCCTATATACGC  48 354
 JI729_09085 1771773 .. 1771791 +  -3.8  -5.73978   GTATTTTTGAAAAAA             CGTAAGTG TAA TGCTTGCG             TTTTTTCTTTGTAAT  85 91
 JI729_09090 NONE
 JI729_09095 NONE
 JI729_09100 1773861 .. 1773890 + -15.9   -4.3534   CATGAATAGAATAAA       CAAAGAGGACAGG AATC TCTGTCCTCTTTG        TTTTAGTGCTTAAAG 100 203
 JI729_09110 NONE
 JI729_09115 1776802 .. 1776823 + -11.7  -5.83822   AATAAAAGTGAGGAA           GAGAAATGG GATA CCATTTCTC            TTTTTTTTGCGTATA 100 36
 JI729_09120 1778017 .. 1778034 +  -9.1  -5.79595   AAAGTGAATGGATGA             GGGACGG GAGA CCGTTCC              TTTTTTATTTTGGAA 100 26
 JI729_09125 NONE
 JI729_09130 NONE
 JI729_09135 1779869 .. 1779889 +  -2.5  -3.16835   CTTTTATTTTATTTT            TAGGCACTA GTA TAGGACCTA            TCATTTCTATTTATC  43 16
         alr 1781802 .. 1781820 +  -7.5  -6.32976   TATATTAAGAAAAAA             CTGAATC ATTTC GATTCAG             TTTTTTTATTTTTTT 100 22
 JI729_09160 1784752 .. 1784778 +  -6.7  -4.87626   AATAGATGTTAAAAA         CACACTTAC TTTTAATTT GTAAGTGTG         TTTTTAGTATTACGC  82 36
 JI729_09165 1785774 .. 1785808 + -20.3  -5.92399   GGTGAATAACTAGAA     GAAGGCTGTCCAAAA AGTTA TTTTGGACAGCCTTC     TTTTTTATTTTGTTG 100 32
 JI729_09175 1787828 .. 1787871 + -14.2   -5.2166   AAGAACTATAAAAAA TAAGAAGAAGCTGTCCTGCAA AAG TTG-GGAACAGCTTCTTCTTA TTTTTTAAGTTATTA 100 30
 JI729_09180 1789127 .. 1789147 +  -6.9  -5.40474   AACATTAAGCTGAAA            TAGGAGG GATATAA CCTCCTA            TTTTTTTAAAGGAGT  89 28
 JI729_09190 NONE
 JI729_09195 NONE
 JI729_09200 NONE
 JI729_09205 NONE
 JI729_09210 1792566 .. 1792588 +  -7.2  -3.54779   TTTAAATTATTGATA           TAATCAATTT GTA GAATTGATTA           TTGGTTAATTTTACT  69 258
 JI729_09215 1792948 .. 1792988 + -13.6  -3.57462   GATAAAAAGAAATAT  ATAATTTAGCCATGCAAC CATAC GTTGTATGGCTAAATTAC  TTTAAAACTAGAGTA 100 45
        esaA NONE
        essA NONE
 JI729_09230 1797520 .. 1797533 +  -2.5  -2.79135   ATTTTTTACTTTTAG               TTATT TGAA AATAA                GTTATTACGGGTTAT  41 46
        essB NONE
        essC NONE
 JI729_09245 NONE
 JI729_09250 NONE
 JI729_09255 NONE
 JI729_09260 1806401 .. 1806419 +  -5.4  -2.89564   GAATTTTTGCTATAG             CATAAGTT GTT AATTTATG             TGTATGAAATGAGAA  53 51
 JI729_09265 NONE
 JI729_09270 1807481 .. 1807493 +  -2.7  -3.13046   TATAAAGGTATTCTT                GAATT AAG AGTTC                TAATTGTTGTTTTTA  43 116
 JI729_09275 1808025 .. 1808051 +  -6.7  -5.55769   CTGAGATTAATAAAA        CCTTCTC-TTCT GGTT AGAATGAGGAGG         TTTTTTATTCTAAGA  90 52
 JI729_09280 NONE
 JI729_09285 1810139 .. 1810167 +    -4  -2.89298   GCTTTTGAGGAGAAA       GAAGGCTATTTGA ACTA TCAAA-AGCATTC        TGATTATGTACGGTA  48 318
 JI729_09290 NONE
 JI729_09295 1812050 .. 1812062 +  -2.7  -2.70932   ATTGCATCTTTATTT                TGGTA ATA TACTA                TAGTTCGGGGAAAGG  40 86
 JI729_09300 1813082 .. 1813094 +  -4.9   -2.8294   AAGATTTCTCTAACT                TCTTT TGA AAAGA                TAGTTGTACAAACTG  50 223
 JI729_09310 NONE
 JI729_09315 NONE
 JI729_09320 1815768 .. 1815803 + -14.9  -3.34013   AATAAAGTGAAACTT    TAATCAGTGGGGGTT TTCTTC ATCCCCCACTGATTA     TTAGTTGAACCAATC 100 31
 JI729_09325 NONE
 JI729_09330 1818041 .. 1818053 +  -7.7  -3.80733   ACGTTTATAAATTCG                TCCAG CAG CTGGA                TTGTTATAAAATAAA  72 364
        ytfJ 1819331 .. 1819350 + -13.6  -5.58179   GAAATCCTTTAAAAA            CGCCTGCT TATG AGCAGGCG             TTTTTTCTTGTAATC 100 29
 JI729_09345 1820258 .. 1820299 + -11.9  -3.53811   GTGGCAATGGGTTGT TGACTAAGAAAACTTGGCGT ATG AAGTCAAGTTTTCTT-GTCA TTTGAAAGGAGTACA  95 19
 JI729_09350 1820627 .. 1820648 +  -8.1  -6.02345   TTTTGTTTCAGAGAA           GACTTTCTA GTAA TAGAAGGTC            TTTTTTTTATGCTTA 100 16
 JI729_09355 1820920 .. 1820942 +   -15  -5.40474   TGTATCACGAATGAA           CACACCAAGT ATA ACTTGGTGTG           TTTTTTTAAAACGCT 100 27
 JI729_09365 NONE
 JI729_09370 1824132 .. 1824159 +  -9.8  -5.00884   CTATATATACATCAA        GTGGCGCCTTTC CATC GAAAGGCGCCTG         TTTTTTGGAGGAAAT 100 72
 JI729_09375 NONE
 JI729_09380 1825904 .. 1825927 + -10.4  -5.72622   ATAAATGATGGAGAA          GGCGTAACTA TTTG TAGTTACGTC           TTTTTTGTTTGTAAA 100 37
 JI729_09385 NONE
 JI729_09390 1827378 .. 1827403 + -16.3  -3.45433   ATTGCTATGTGAAAA         TCCCCCTCAAA TATA TTTGAGGGGGA          TTAAATTTTTGAAGT 100 45
 JI729_09405 NONE
 JI729_09410 1830528 .. 1830549 +  -8.7   -5.4505   TGAGATAAGTAAAAA           GCTCAATGC TTTA GCTTTGAGC            TTTTTTATTAAAACA 100 33
        bsaA 1833100 .. 1833141 + -16.2  -3.61371   AGTTTCACTTTATTA AAAAACGTCTCAAAGAAC AATGTA GTTCTTTGAGACGTTTTC  TTTAAACTCACATTT 100 46
 JI729_09460 NONE
        narH 1844530 .. 1844540 +    -4  -4.20516   AGGTGGTCCAGGCTC                 TTGT ATG ACAA                 TTTCTTAAATAAAGG  61 7
        narJ NONE
        narI 1845846 .. 1845869 +    -6  -5.30616   ATGGTTAAAACGAAA          CGAGGTCT AATATGGA AGGCCTCG           TTTTTGTTTACATAG  81 66
        moaA NONE
 JI729_09490 1848960 .. 1848975 +  -4.8  -2.76696   TATATAGGATGAACA              GAAAAA TCGT TTTTTC               CTTATTAAAACGAGG  50 29
 JI729_09495 NONE
 JI729_09500 NONE
        moaD 1851015 .. 1851031 +  -5.8  -3.68798   ACTGTGGCGATGATT              CCGCCA GTAAG TGGTGG              TTGATTCTTTTCGAC  62 5
        narK 1852296 .. 1852325 + -18.1  -4.30844   ATTAATAAGGAAAAA       GAACCATCCCAAA GTAT TTTGGGATGGTTC        TTTTAGTAATAGGCT 100 36
 JI729_09515 NONE
 JI729_09520 NONE
 JI729_09525 1854869 .. 1854896 +  -3.6  -3.28924   TCTTTACCAGAAGTT        GAAATAGTGA CAACATAT TCATTATTTC         TTATAACGCCAGGTG  48 319
        exsG 1862606 .. 1862643 + -16.6  -3.12378   TAATTTAAATCTCTA   TAGTAGAAGAGGAAGG GACATG CCTTCCTTTTCTACTA    TTACATAATATAATT 100 38
 JI729_09570 1863065 .. 1863096 + -16.2  -3.35283   TAACAAAATAAAAAA      TAAAGCAGATTCTA AATA TAGAATCTGCTTTA       TTATGAAATACTTGT 100 69
 JI729_09580 1866140 .. 1866173 +  -8.3  -5.36441   AAGTATAATAAAAAA     GTGCAGAAATCTT GTGTTAGA AAGAATTCTGCAC      TTTTTTATGTGGGGA  95 53
 JI729_09590 1867860 .. 1867892 + -15.1  -5.02231   CTAGATACTTAAAAA      TGCCAAATCCTTTGT GAT ATAAGGGATTTGGCA      TTTTTGATGTTTTTA 100 184
 JI729_09610 NONE
 JI729_09615 1871260 .. 1871271 +    -3  -2.57931   CCGTCTAATAGTAAA                TTAC CATA GTAA                 GTTGTCACAAATAAA  42 33
 JI729_09620 1871833 .. 1871843 +  -2.6  -4.63486   AAGTATATAAAAGCT                 TAAT TTA ATTA                 TTTTATTGGGGAGGT  60 23
 JI729_09625 1872142 .. 1872163 + -10.2  -3.28712   TATAACAATTTAATG           CGACAAGC TGTTGT GCTTGTCG            TTATGACCAGAAAGA  83 80
 JI729_09630 1872555 .. 1872578 +    -9  -4.20712   GAAGAAAATAAAAAA          TCTATCACTT AGCA GAGTGATAGA           TTTTAGACTCTTATA  84 30
 JI729_09635 NONE
 JI729_09640 1874025 .. 1874042 +  -5.5  -3.14211   TAACAAAATAAAAAA             GTCGAGA TTGC TCCCGAC              TTGCTGCGACAAAAT  57 38
 JI729_09645 NONE
 JI729_09650 1874919 .. 1874937 +    -6  -4.09864   AAGGTAAAAGAAAAA             GAACCCTT TAT AAGGATTC             TTTTGGGGAGTCAAT  68 448
 JI729_09675 NONE
 JI729_09680 NONE
 JI729_09685 1882697 .. 1882727 +  -8.4  -4.44301   GATGCAATGGATAAA       GCAATGACTAGATT TAA AATCTAAGCATTGC       TTATTTCTTTTAAAT  85 2
 JI729_09690 1883401 .. 1883424 +  -9.6   -3.5915   AGAAAATTATGTAAA          TAAGCTGTCC ATAT GGGCGGCTTA           TTGGATTTTTTTACT  83 82
 JI729_09700 1885133 .. 1885168 +  -2.6  -5.27923   AACGTGTTATATTTG    TATTGTGAGAAGTG GCGGAAAA CACTACTCACTATG     TTTTTTCTAAAATTC  69 178
 JI729_09710 1886631 .. 1886646 +  -6.8  -6.14618   TTAGAAACCACAAAA              GTAGCG ATTA CGCTGC               TTTTTTTATTTTGTA  95 42
 JI729_09715 NONE
 JI729_09720 NONE
 JI729_09725 NONE
 JI729_09730 1889462 .. 1889494 + -10.8  -4.55446   TAAATAGCTAAATAA      TAAATAGCCGGACA TTAAT TGTTCGGTTATTTA      TTTTGCTCTTTATTA 100 38
 JI729_09735 NONE
 JI729_09740 NONE
 JI729_09745 NONE
 JI729_09750 1894085 .. 1894122 + -10.9  -4.18018   CAATAAAACCAATAA   TACGAATGTAAACT-TTC ATT GATTAGTTTACATTCGTA   TTTTCAATGAGAAAA 100 143
 JI729_09755 NONE
 JI729_09760 NONE
 JI729_09765 NONE
 JI729_09770 NONE
 JI729_09775 NONE
 JI729_09780 1896770 .. 1896795 + -11.2  -4.68724   ACAGTACAAAAAGCA         CCGGCTACCA CATAAA TGGTAGTCGG          TTTTCTATTACATAA 100 11
 JI729_09785 NONE
 JI729_09790 NONE
 JI729_09795 NONE
 JI729_09800 NONE
 JI729_09805 NONE
 JI729_09810 1903314 .. 1903343 +  -6.5  -5.14563   TTTCTGATTTACCAA       TTCCCGATGTGTCG TAA TGATGCA-CGGGAA       TTTTTTAATACAAGA  81 9
 JI729_09815 NONE
 JI729_09820 NONE
 JI729_09825 NONE
 JI729_09830 1907261 .. 1907306 +  -6.2  -3.64198   ATATTTAAGCATAAG GGGGTAGCAGAAGAATGAGT GAAAAA GTTTATTCTATTGCTTCCCC TTCTATATGTACCAA  64 33
 JI729_09835 NONE
 JI729_09840 NONE
 JI729_09845 NONE
 JI729_09850 NONE
 JI729_09855 1913348 .. 1913363 +  -4.6  -5.83211   CTTTATTGAAACCGA              GCGTGC AGCA GCAGGC               TTTTTTATTTTGGTC  91 41
 JI729_09860 1913924 .. 1913947 +  -9.6  -5.27335   CGCCTTACATAAGGA          GAGCATTGTC AAAA GACGGTGCTC           TTTTTGTTTGGCAAA 100 50
 JI729_09865 1915077 .. 1915114 +  -3.2  -3.84585   TTGTAAGCTAAGAAA  TTTATAAATGTC-ATGTA GAAT TA-ATAGACATTTATAAA   TATTTTGTAATACGT  52 65
 JI729_09870 1915471 .. 1915510 +  -8.6  -5.02323   CCTAAAAGAAGTTTG  AAGGCATACCAACAGTGT ATTA AAGCTGTTGGTATGCCCG   TTTTATTTATAATAA 100 36
 JI729_09875 1916947 .. 1916966 + -10.8  -5.69793   ATAGCAAATAAAAAA            GGTGATTC ATAA GAATCACC             TTTTTTATTTGCTAT 100 56
 JI729_09885 NONE
 JI729_09890 1919480 .. 1919524 +   -19   -4.4078   CATGGTGAGCATATC TAAAACAAAAAGAGGGCGTG ATATA TACGTCCTCTTTTTGTTTTA TTTTAATTACGACCA 100 23
 JI729_09900 NONE
 JI729_09905 NONE
 JI729_09910 1924198 .. 1924218 +  -9.8  -6.20267   TGACTAATAAAAAAA            TCCTGCAT GAGAA ATGCAGGA            TTTTTTTATTTTTAA 100 34
 JI729_09915 1924559 .. 1924591 + -11.6  -6.14618   AGTGTAATAAATTTT     GAAACCATACAT-GT TTGA ACTATGTATGGTTTC      TTTTTTTGTTTTGTA 100 34
 JI729_09920 1925267 .. 1925292 +  -9.9  -3.40668   AGAAAATAAAAAAAG         GGATTCCTT-CT GAG AGTAAGGAATCC         TCCTTTTTGTTGCTA  81 245
 JI729_09930 NONE
 JI729_09935 NONE
 JI729_09940 1928401 .. 1928421 +    -9  -5.05113   AGAATTGCTAAAGAA            GGGGGAGA GTAAA TCTCCCTC            TTTTCTTTATATAGA 100 30
 JI729_09945 1929466 .. 1929488 + -12.1  -5.63645   TACCACGGGTTAAAA           CTCGTCTCT TTTTT AGAGACGAG           TTTTTTGTGTTTTAA 100 269
        argS 1931228 .. 1931256 +  -7.5   -5.8187   ATAGTAGTAAACTGA        CAAACTGGGTCTA GTA TAAACCTGGTTTG        TTTTTTTATTGGATA  95 42
 JI729_09955 1931646 .. 1931657 +    -3  -2.82635   GTGTTATATGGATAT                TATC TTAA GATA                 TATAGTAATGGAGGT  43 18
 JI729_09960 1931909 .. 1931963 +   -12  -4.08394   CTTGTTAAATTTTTC TTCCAAA-TAAAAAGCTAGTGTATT TTTAAT AATACACTAGCTTTTTGCTTTGAAA TTTTAAGAAAAGTGT 100 33
 JI729_09965 1932641 .. 1932651 +    -4  -3.23165   CTGATATATTTGAAT                 TATC GCC GATA                 TAATTTTATGTACTA  50 163
 JI729_09970 1937405 .. 1937429 + -15.8  -5.43487   GGTATCGCGGGTAAA          CCCGTCCCTA CTTTA TAGGGACGGG          TTTTTTGTGTGCTTT 100 347
        ileS 1940580 .. 1940604 + -15.9  -5.04175   TAATTAAAGAAAAAA          GGAAGTTGGAA TGA TTCCAACTTCC          TTTTTGTATGATTAG 100 34
 JI729_09980 1942412 .. 1942435 +   -11  -5.04222   GAATTAATATAAAAA          GTCGTGGCAT TTAT AAGCCACGAC           TTTTTAATTTGCTTA 100 34
        aspS 1944832 .. 1944858 + -18.2  -5.71983   CTCATACCGTAAAAA         GAATCTTCGCGA TTA TCGCGAAGATTC         TTTTTTTATAGTTCG 100 29
 JI729_09995 1946739 .. 1946753 +  -2.2  -2.75992   GTAATAGGGATTATT               TAATAT TAA ATGTTA               TAATATTCAGTAAAA  40 23
 JI729_10000 1947699 .. 1947725 + -10.2  -4.04319   TTGAAATGAAGAAAA         GGGTGCTTCT ATAAATG AGAGGCACCC         TTTCTAAATTTCTGG  95 32
 JI729_10015 1950079 .. 1950093 +  -4.4   -4.0641   AATTATAATTAGACA               TTTTTA GCA TAAAAA               TTTGTATGAATAAGA  59 122
 JI729_10020 1951662 .. 1951674 +  -3.5  -2.54574   TCATCAAATCGATAA                TTTAT ATT ATAAA                ATATTAATTAGGATA  44 61
 JI729_10025 1953006 .. 1953038 + -10.9   -4.0911   CCAAACTTAAAGTCT      TGTTTTATTGTGTAT AAT ATACATAATAAAACG      TTGTTATTAGTTTTA 100 123
 JI729_10030 1953838 .. 1953851 +  -3.9  -3.53444   GAAAATATTTTATAA               TGTAA GTGG TTACA                TTTAAGGGGGAATGC  50 83
 JI729_10035 NONE
 JI729_10040 1954814 .. 1954837 +  -4.7  -5.93252   CATTTTCAAGAAAAA          GAATTTCTT TGTAAT GAGAAATTC           TTTTTTATTTTTGCC  91 60
 JI729_10045 NONE
 JI729_10050 1955707 .. 1955734 + -10.7  -3.81428   ATAGAAGTCAATAAA        GAAGGGATAGC CACTAA GCTATTCCTTC         TTTACGTTAATTGCT  91 63
 JI729_10065 NONE
 JI729_10070 1959010 .. 1959025 +    -9  -4.96762   TCTACCATTAAAAAA              GAGCCA TTGA TGGCTC               TTTTTCTAGTCTGTA  93 16
 JI729_10075 1959878 .. 1959898 +  -8.4  -5.98675   TGGCTTTCTTAAAAA            GAACAAGA GAAAA TCTTGTTC            TTTTTTATTTTTATA 100 29
 JI729_10080 NONE
 JI729_10085 NONE
 JI729_10090 1961949 .. 1961979 + -13.4   -5.0538   ATTGATATGACATAG       AAAAGGTAGGTGTG ATT CGCACCTACCTTTA       TTTTTTACCATCAAA 100 26
        thyA 1964624 .. 1964642 +  -3.2  -3.96624   TAATTGTAGAGGAGA             TGAAAAAA TGA TTGTTTCA             TTTATGGTCGCGATG  54 38
        dfrA 1965127 .. 1965152 + -11.3   -5.4659   AACAATAATAAAAAA         GATTGATGTGA GAAT TCACGTCAATC          TTTTTATTTGTATTC 100 33
        pbpC 1967273 .. 1967301 + -13.3  -4.96848   TAATATGTAATAGAA        GGCTATCTCTATA AGT TGTAGAGGTAGCC        TTTTTATATGAAAGA 100 38
 JI729_10115 1968156 .. 1968178 + -10.7  -6.04419   TAGAATGCTTAAAAA           GTCCAAACA CTTGC TGTTTGGAC           TTTTTTTCTTCTTTT 100 43
 JI729_10120 1968976 .. 1969002 + -16.8  -5.58179   ATAAGTAATAAAAAA         GGATTCAGCTTA TAG TAAGCTGAATCC         TTTTTTATTATGCTG 100 33
 JI729_10130 NONE
        tatC 1970835 .. 1970854 +    -5  -5.85425   AAATGCAGTCGAAAA            GTGCCT CGTTATAA AGGCAC             TTTTTTATTTATTTG  91 12
 JI729_10140 1971441 .. 1971462 +  -9.5  -5.10154   ATGATACGAAGTACG           GACAGGGTT AGTA AACTCTGTC            TTTTTCATTTTAGAT 100 37
 JI729_10145 1972434 .. 1972460 + -12.5  -5.38047   CAGAGTAATAAAAAA         GCTACTTGAAA ATATA TTTCAAGTAGC         TTTTTTATGTAAATA 100 33
 JI729_10155 1974657 .. 1974677 + -14.1  -6.35605   TTAGTGGGTTAAAAA            TAAGGGTGC ATA GCACCCTTA            TTTTTTTTTGTATTA 100 29
        asnB 1977283 .. 1977308 + -12.7  -5.53991   GTTTAATTAGAAAAA         CCTTAAGATCG CATA CGGTCTTAAGG          TTTTTTTCATAAATA 100 35
 JI729_10170 NONE
 JI729_10175 1978095 .. 1978112 + -11.3  -5.95539   GCAAGATGATAGAAA             CCGCCTT ACAT AAGGCGG              TTTTTTTATTTGCAA 100 13
 JI729_10180 1979223 .. 1979256 + -19.9  -4.25283   ATAGTGCAATATGGA     TGCGTATCCTTGTTA TGTA TAACAAGGATACGCA      TTTTAATAACAACAT 100 52
 JI729_10185 1980408 .. 1980432 + -10.9  -6.02919   AAATAAATGATAAAA          TACATCACTTT TAC GAAGTGATGTA          TTTTTTTGTTTGTGA 100 35
         dat 1981416 .. 1981432 +  -4.3  -5.56568   ATTATGAAGAAAAAA              GCTGGTA TTC TTCCGGC              TTTTTTTCATGATAT  82 40
 JI729_10195 1982163 .. 1982182 +  -6.5  -5.61881   TTGCTGTATAGAAAA            GACATTG AACTAA CAATGTC             TTTTTATTTTTGAGG  90 41
 JI729_10200 1982907 .. 1982931 +  -5.8  -5.64421   TAATATGAATAAAAA          GTACATTACT CAAAA AGTAGTGTGC          TTTTTTGTTTGGACT  88 38
 JI729_10210 1984029 .. 1984049 + -10.5  -5.04733   AGTGAAGTGAAAAAA            GAGGCCTTT AAA AAAGGTCTC            TTTTATTTGTCATTG 100 31
 JI729_10220 1984814 .. 1984832 +  -8.9  -5.49729   TAACATCGAATAAAA             GAGCTGA TAAAT TCAGCTC             TTTTTTTACGTAGTT 100 28
 JI729_10225 1986077 .. 1986096 +  -2.8  -6.02919   ATTGATATAAAGAAA            GGGCTGAA GGAA TTCGGTTC             TTTTTTTATTTATAG  86 105
 JI729_10230 NONE
 JI729_10235 1987918 .. 1987943 + -10.7   -3.3636   AGTGAAACATGGAGA         GAATTATTCAT AAGC ATGAATAATTC          TGTTATATCGTATGA  87 13
 JI729_10240 1988995 .. 1989012 +  -9.9  -3.59262   GCGAATATAAAAAAA             GCTCTTC AAAT GAAGAGC              TTTCAGACTGTAGAC  83 31
 JI729_10245 1990048 .. 1990060 +  -4.9  -2.96598   AGTTTGTTAATTTAT                TTTCT TTT AGAAA                TATGTGACTTACTTA  51 62
        adhP 1991406 .. 1991440 + -16.7  -4.80453   AGTTAGACAGTATAA     GAAGATGATCCCTGT ATTTA ATAGGGATCATCTTC     TTTATTTTCTACTAA 100 89
        gntK NONE
 JI729_10270 NONE
         gnd 1997805 .. 1997830 + -12.7  -5.42265   GGATGTTTTTGAAAA         GAAACTTGTGC ATAA GCGCAAGTTTC          TTTTTTATAGTTTAA 100 41
 JI729_10285 NONE
 JI729_10290 2000541 .. 2000564 +  -6.8  -5.73978   CAAAGTAATTGTACG          AAACTCATAC GAAA GTATGAGTTC           TTTTTTGTTTATCAT  95 33
 JI729_10295 NONE
 JI729_10300 2002454 .. 2002501 +  -6.5   -3.0353   CGTTTAAAAAACACT TCTGC-CGCCCTTTCTTTTTCT GTATA ATAAAAAGAAAGGGAGTGCAAA CTTATTTATGAACAA  59 34
 JI729_10305 2003066 .. 2003083 +  -9.9  -5.95539   ATTGTTCGACCGTTA             GAGCTCA AATG TGAGCTC              TTTTTTTATTTAAAA 100 25
 JI729_10310 NONE
 JI729_10315 2005668 .. 2005689 +  -9.5  -5.64274   ATATGTTTGAAATGA           CCGTTCATT ACAA AATGAGCGG            TTTTTTTGTGCATAC 100 64
 JI729_10320 2007274 .. 2007293 +  -4.3  -5.85425   ATAAAAATGTAAAAA            GTCCTTT TCATTT AAAGGGC             TTTTTTCTTTGTTTA  89 29
 JI729_10325 2007628 .. 2007646 +  -8.1  -5.73978   AGTTTTTATTTTGAA             CCTGGCG GATAA CGTCAGG             TTTTTTATTTCTAGT 100 45
 JI729_10330 NONE
 JI729_10335 2011374 .. 2011398 + -10.2  -3.75153   CATTAAGAAGTAAAA          GAAATCCTTT TTCAT AAAGGATTTC          TTTAGATTAAGAAGA  89 28
 JI729_10340 2012444 .. 2012461 +  -2.7  -4.29176   ATGGGTTCTTCTTTC             GTTAGGG CAGC TTCTAAC              TTTTGAATTCGCTCT  57 225
 JI729_10350 2014595 .. 2014612 +  -9.9  -5.42259   AAATTAGCTCGTAAA             CTCTGCT ATAT AGCAGAG              TTTTTTTGAGCATAA 100 27
 JI729_10355 2016182 .. 2016212 +  -5.5  -5.11033   ACTTGCACTAAAAAA      CGAGTA-GGAAATG TTTA CGATTCCATACTCG       TTTTTTACGCTTCTA  79 57
 JI729_10365 2018016 .. 2018045 + -15.2  -4.62475   CATTTCAAAAATAAA       CAGTCTACACCA AATGAA TGGTGTAGACTG        TTTTAATTTGTGAGT 100 27
 JI729_10375 NONE
        atoD NONE
 JI729_10385 NONE
 JI729_10390 NONE
        ablB 2024703 .. 2024718 +    -9  -2.94466   AATCGCACATAGGTG              TGCCGA AAAT TCGGCA               TGTAATTGCTGGATT  72 143
        rocR 2026125 .. 2026142 + -12.7  -5.14985   GCAAGTACGACAAAA             CCGCCGA ATAA TCGGCGG              TTTTTGTGTGTTTGC 100 15
        ablA NONE
 JI729_10410 2028037 .. 2028052 +  -6.1  -6.28401   TATTTCGACTTTTAA              CCAGC TTTTAT GCTGG               TTTTTTTCTTTTTTG  95 26
 JI729_10415 2028339 .. 2028382 + -16.4  -5.88565   AAAACTATTTGAAAA CATACAGAATACATTACTTT GTTT AAAGTGAAGTATTCTGTATG TTTTTTTATTATGAA 100 40
 JI729_10420 2029421 .. 2029431 +    -4  -2.65993   CCCCCTTTGAATAGC                 TTGT ACT ACAA                 TCGTATGCATCTCGT  46 209
 JI729_10430 2029733 .. 2029751 +  -8.1  -5.32699   GATGAATGAAAGTAA             CGACGGG CATAA CTCGTCG             TTTTTTACTCTTTAC  93 32
 JI729_10435 NONE
 JI729_10440 NONE
 JI729_10445 NONE
 JI729_10450 2032276 .. 2032297 +  -7.4  -5.28481   ACGTTCATAAAAAAA           GAACCTAT GTCATA ATAGGTTC            TTTTTTCATTGGCTC  86 11
 JI729_10470 2034744 .. 2034759 +  -2.6  -5.86976   TAAGAAGAATTAAAA              GTAGTCT AGC AG-CTAC              TTTTTTATTTTATCA  85 41
 JI729_10475 2035155 .. 2035175 +  -3.2  -3.35679   GGTTTATATAAATAA            GGGTGC AGATTAATA GCGCCC            TTATGAATAAGAAAA  47 58
 JI729_10480 2035831 .. 2035860 + -13.7  -4.36508   TTTAGTAGGTTTAGT       TAATCCCCTTACC AAAT GGTGGGGGGATTA        TTATTGTTTTTCTAA 100 60
 JI729_10490 2037547 .. 2037571 +  -7.3  -5.24129   ATTAAACTGTAAAAA          GACATTTTC ATTAATA GAAAATGTC          TTTTTTATGCACCAA  86 36
 JI729_10495 2039041 .. 2039084 +   -23  -3.57263   TTTTTTTGAGAATTA TATAAAGAGTCTTCTTACTA TGCA TAGTAAGAAGACTCTTTATA TTTAAAAATGAAAAT 100 49
 JI729_10500 2040077 .. 2040114 + -13.8  -3.33708   TGACTGTAATCATAA   TTAGAAAA-GGGAACTC ATATA GAGTTCCCTTTTTCTAA   TTAGTGTGTGAGTTA 100 41
 JI729_10505 2040740 .. 2040776 + -15.5  -3.04203   GTTCCATAGAGTATG    TAAGAAAAGAGAGTGTT GTA AATGCTCTCTTTTCTTA    TGCTTTGTGAGTTCG 100 81
 JI729_10515 2041996 .. 2042031 +  -6.4  -4.17701   ATTATTGAAATAACG    TAAAAGAAGCTGAATAT TAA ATGG-CAGCTTCTTTTA    TTTCTGATTTATGAG  70 23
 JI729_10525 NONE
 JI729_10530 2043217 .. 2043233 +  -9.5  -5.69379   GATATATAGCAAAAA              GTAACCA TGA TGGTTAC              TTTTTTTGCTTATGT 100 32
 JI729_10535 2044056 .. 2044086 + -17.2  -3.15758   CATGCCCAGCATGCG       TATAAAAAGCACCT TTA AGGTGCTTTTTATA       TTAGTAGCACATTAT 100 21
 JI729_10540 NONE
 JI729_10545 2045205 .. 2045227 + -12.1  -5.17353   CAAATGTTTTTAAAA           GAAAGGAGG ATTAA CCTCCTTTC           TTTTTTAGTGGGTGT 100 50
 JI729_10555 2048449 .. 2048484 + -12.2  -5.48054   AAAAAATATTAAAAA    GCACTTAAGATTTGTGA AAA TTAC-AATCTTAAGTGC    TTTTTTCATTTTGCT 100 52
 JI729_10565 NONE
 JI729_10570 2050854 .. 2050877 + -11.8  -5.59879   AATATCATATAGTAA          CGAGCTGTAT TTAT GTACAGCTCG           TTTTTTCTATTTCTC 100 101
        mmgD 2052329 .. 2052353 + -10.8  -2.52516   TAGCGCCGCCCGCCA          GATGGGTGTT TGACC GACACCCATC          ATTAATAATAACGAA  82 59
        prpD NONE
        prpB 2054774 .. 2054787 +  -2.4  -3.54424   TAAAGCAGCGAAGGC               GATG AAAATA CATC                TTTGGCAAAATAAAA  47 42
 JI729_10590 NONE
 JI729_10595 NONE
 JI729_10600 2059039 .. 2059076 + -12.9  -3.88541   CCAAATTAGTTATTA   AATGAAAACCACCACTA TTAA TAGTGGTGGTTATCATC    TTGTTAATTACTTTT 100 55
 JI729_10615 2061606 .. 2061631 +  -3.4  -4.08394   GACTTTATACAAAAA         TAAAGATGTC ACAATA GGCATTTTTA          TTTTGGGAAAAATAT  55 23
 JI729_10620 NONE
 JI729_10625 NONE
 JI729_10630 2066644 .. 2066664 +  -6.1  -5.65496   GAGAACTAAGTCTAA            GTCGGTG TATTTAT CACCGGC            TTTTTCTTTTTCATA  91 378
 JI729_10640 2068299 .. 2068314 +  -4.8  -2.77235   TAAAACCTTGAAGTC              TATTTC TAGC GAAATA               TCCTTCCATCATTAA  50 136
 JI729_10645 2068863 .. 2068874 +    -3  -3.08224   CAAGGTTACAAAAGG                TTAC TGAC GTAA                 ATTTTACACTCAAAT  45 19
        fbpA NONE
 JI729_10655 NONE
 JI729_10660 NONE
 JI729_10665 2071839 .. 2071849 +    -4  -5.42605   GATGCATACACTTTC                 CAAA TCT TTTG                 TTTTATTTTTGTTGG  78 482
 JI729_10680 2074490 .. 2074500 +  -6.8   -3.3676   ATTAAAAGAACGGTA                 GGTG GGT CACC                 TTGTCAAGTATTCAG  64 41
 JI729_10685 2076012 .. 2076040 +  -2.6  -3.54511   AAGTTTCTCAACCCA       TTCT-CTGTTTAC AAAA GTAAACATTAGAA        TTATAATTACATTAT  48 520
 JI729_10700 2077402 .. 2077422 +  -7.6  -5.98675   GAATAAGATTATGGA            GAGCGATC TTATT GATCGTTC            TTTTTTGTTTTTCTA 100 117
 JI729_10705 2078337 .. 2078362 +  -8.3  -2.72344   TATGTTAGAAAAATA         CAGAGGGGCTT TTGC GAGTCCCTTTG          TACTTACAACTAACC  68 96
 JI729_10710 NONE
 JI729_10715 NONE
 JI729_10720 NONE
 JI729_10725 NONE
 JI729_10730 NONE
 JI729_10735 2083886 .. 2083908 +    -4  -4.75518   ACTTGTTGAGCGATT           GGACCTATTG GAT CGATTGGGCC           TTTTGGTTTTGTATA  69 263
 JI729_10745 NONE
 JI729_10750 2085656 .. 2085671 +  -3.4  -4.03611   TTATAATGATTAATC              TTTATT GTGA AATAAA               TTGTTTAACTATTTT  55 56
        thyX NONE
 JI729_10775 NONE
 JI729_10780 NONE
 JI729_10785 2089820 .. 2089833 +  -5.3  -3.02459   GTACTAGTTTTTTCT               CAACT AAGA AGTTG                TGTACTTGTTGAATG  53 246
 JI729_10795 NONE
         dcm NONE
 JI729_10805 NONE
 JI729_10810 2093248 .. 2093266 +  -4.5  -4.90381   ATAAACGCTGATGAA             GGCTACC TATAT GGTGGTC             TTTTATTATATTAAA  72 225
 JI729_10815 2094738 .. 2094751 +  -6.7  -2.57581   CATCTAAGAACAATG               CGCTT ATAA AAGCG                ATATATTTCAGTTAA  60 17
 JI729_10820 2095876 .. 2095893 +  -9.1  -5.85244   GAATATTTCAACTAA             GCGAGCC TACG GGTTCGC              TTTTTTATTTTACTT 100 246
 JI729_10825 NONE
 JI729_10830 2097062 .. 2097089 +  -8.6  -3.24076   CGTTCATACTTACCG        GTAATCCTTTTC TAAC GAAAAGAATTAC         TATCTTATATAGTCG  74 195
 JI729_10835 2098034 .. 2098052 +  -4.5  -2.74782   GTAAAACGAAAAAGA             CTACGTC GTCAA GACGCAG             TCCTTACAAGTTTAT  50 465
        terL NONE
 JI729_10850 NONE
 JI729_10855 2102770 .. 2102792 + -10.6  -5.47159   CGAAGAAGTAGATCA           GTCGTTGGTT CCA AACCGACGGC           TTTTTTATATTAAAA 100 30
 JI729_10860 2103958 .. 2103979 +    -8   -3.3761   ACAGTATCTTAATTA           GAGGCGGT TTAAAT ACCGTCTC            CTTTTATTGAAAGGA  69 29
 JI729_10865 NONE
 JI729_10870 NONE
 JI729_10875 NONE
 JI729_10880 NONE
 JI729_10885 NONE
 JI729_10890 NONE
 JI729_10895 2107026 .. 2107045 +  -9.3  -5.46698   CTAGCGCATAGATAG            GACGAGC TTAAGT GCTCGTC             TTTTTTAATTTTGAA 100 30
 JI729_10900 NONE
 JI729_10905 2107848 .. 2107860 +  -4.1  -2.90496   TTCTAGCGGATATAT                CTTCT TTA AGGAG                TAGTTTGACACAAGC  48 71
 JI729_10910 2111612 .. 2111623 +  -2.2  -3.28472   GTATTTTAAAGGAGG                GCGA TAGA TTGC                 TAGTTTTTAATGGAA  44 32
 JI729_10915 NONE
 JI729_10920 NONE
 JI729_10925 2117918 .. 2117936 +  -4.5  -5.28481   AATATAACGGAAAGG             GAGCAGC CGTAA GCTGGTC             TTTTTTAATTGCCTA  77 14
 JI729_10930 NONE
 JI729_10935 2119321 .. 2119347 +  -2.1  -6.47325   TTTATTGAACGTAGA         AAAGACCGCCT ATTAC AGGCGGTCGAA         TTTTTTTTATTTTTT 100 49
 JI729_10955 NONE
 JI729_10960 2122544 .. 2122555 +  -5.8  -2.87132   TTATGTACTTTAGTA                CGTG AATT CACG                 TATATAGAAAGACAA  55 28
 JI729_10990 2127705 .. 2127749 + -13.2  -4.76423   CTAGTGAAATATTTT TA-TATAAAATAGCCCCTGCT GTTG AGCAGGGGCTATTTTGTGGTG TTTTATGTATTTGTA 100 37
 JI729_11000 2129732 .. 2129757 +  -6.2   -5.3236   TATGATTACGAAAAA         GCATCCTATT CTATTA ATTAGGATGC          TTTTTTATGAGTTAT  82 63
        dhbA NONE
        dhbC NONE
 JI729_11015 2133983 .. 2134001 +  -7.5  -3.74077   CCGGAAGGAAGTGAT             TAGATGG CTATC CCATCTA             TTTCAGTATATAAAA  71 47
 JI729_11020 NONE
 JI729_11025 NONE
 JI729_11030 NONE
 JI729_11035 2143738 .. 2143748 +  -2.6  -3.42147   AATATACGTATGCTT                 TTTT ATG AAAA                 TTGATATTCGTTGAA  46 42
         sfp 2144541 .. 2144554 +  -2.3  -3.13403   TAAAAAAATTACAGA               AGAGG TGTT CCTCA                TGTTAGTAGCGGAAA  42 38
 JI729_11045 2145100 .. 2145133 + -16.3  -5.27335   TTGCTTAAATAAAAA     CAAGAAACCAGCCTAT AAA AT-GGCTGGTTTCTTG     TTTTTATTTAACAGC 100 29
 JI729_11055 NONE
 JI729_11060 2146931 .. 2146969 + -10.4    -4.386   AGTAATATAGTTTGT   AAGAAGGAGAGGCTTTAA TTG TAGAAGTCTCTCCTTCTA   TTTTATCCGGCATTA 100 36
 JI729_11080 2151326 .. 2151350 +    -8  -5.88565   GGGAGATTAGCTAAA          GATGTAATTC ATTAA GAGTTACATC          TTTTTTTATTCTGAA 100 31
 JI729_11085 NONE
        rluF 2153048 .. 2153073 + -11.3  -5.16572   TGGTAAAATTGTGAA         GTGAAACCAAA AAAA TTTGGTTTCGC          TTTTTTAAATTAAAT 100 35
        thrS 2155619 .. 2155650 + -11.8  -3.64773   AATATTGATTGTAAA      GAAAACACACTATT AGCA ATTAGTGTGTTTTC       GTTTTTATCTTACAA  95 33
 JI729_11100 NONE
 JI729_11105 2158531 .. 2158567 +  -8.1  -3.37205   AGCTAAATAGTTTAT    GAAAAGAGTCCTTTTGT TGA AAGCAAGGGCTCTTTTC    TATGTGTTTTTATAA  72 31
 JI729_11110 2159097 .. 2159127 + -16.4  -5.15969   TACAAAAATAAAAAA       GATAGCTGAAGACA AAT TGTTTTCAGCTATC       TTTTTTCGCTTAAAG 100 202
 JI729_11125 2162772 .. 2162797 +  -9.2  -4.28656   TAAATTGCACAAAAA         GAGTATTGAA ATTTAA TTCAATACTC          TTTTAAATATTAAGT  89 65
 JI729_11145 2165488 .. 2165511 +  -5.3   -5.1963   ATAAATAATCAAAAA          CACATCTCG CATTTT TGAGGTGTG           TTTTTGTTCATTCCA  79 64
 JI729_11150 NONE
 JI729_11155 NONE
 JI729_11160 NONE
 JI729_11165 2168677 .. 2168702 +  -9.9  -5.60556   GAGTCTTATATAAAA         GAAGTTATCTT AAGT GAGATAACTTC          TTTTTATTTTATATT 100 483
 JI729_11170 2169288 .. 2169302 +  -5.8  -3.78629   AAAACCCCCACGGAT               TAAAGT TTC ACTTTA               TATTTTCAGTTTACT  64 72
 JI729_11175 2170087 .. 2170116 + -16.7  -4.63218   AAATAAATTATAAAA       GAGCATGTTTGAA AAAA TTCAAACATGCTC        TTTTATTAAAGCAAA 100 100
 JI729_11185 2173115 .. 2173152 + -12.4  -2.98014   AAGGTGGATGCCTAG   TT-AAAAAAGCCAAGGA TATTT TCCTTGGCTTTTTTCAA   TGTAGTTAATTAATT 100 26
        catA 2174349 .. 2174399 + -18.8  -3.22476   GGATAAAATTGAAAA TGAATAAAAGAAGAGAACATGT TTACATT ACATGGTCTCTTCTTTTATTCA TTAATACTAAGTGAT 100 179
 JI729_11200 NONE
 JI729_11205 2176030 .. 2176043 +  -3.9  -3.60925   AGGTGAAAAGTTAAC               CAAAT CCAT ATTTG                TTAATCTTTTTGGAA  52 27
 JI729_11210 2176704 .. 2176725 + -13.1  -4.87893   AATGAATAGTTAAAA           GCATGACAG TATA CTGTCATGC            TTTTTCATTAGAATT 100 32
 JI729_11220 NONE
 JI729_11225 2178554 .. 2178570 +  -2.3  -2.87132   GTATGTTATTCATTC              TTAATGA ACG TCAATAA              TCTGTAAAAGGAAGC  40 22
 JI729_11230 2178881 .. 2178913 +  -4.3   -5.4833   TTTTTAAAATAAAGA      GAACTATGACGTG GTTTGTA TATGTTATAGTTC      TTTTTTATTAGGTAA  78 29
 JI729_11235 2180452 .. 2180509 +   -14  -3.66095   AAATAAATAATACTG TAGAATAAATAAAAACTGTCTCTTCA GCAAAA TGGAGGAACAGTTTTTATTTATTTTA TTTGAATGGAAATTT 100 31
 JI729_11245 2181921 .. 2181938 +  -5.6  -6.17268   TTTATAATAAAAAAA             CCTCTT AATTAA AAGAGG              TTTTTTTTATTATAA  93 34
 JI729_11260 NONE
 JI729_11265 2184387 .. 2184414 +  -4.2  -6.11392   TGCATAAAGTAAAAA        CAACGAGTGTTGT AGA ACG-CAATCGTTG        TTTTTTTGTTTCTTT  91 34
 JI729_11270 2185250 .. 2185288 + -17.8  -2.95448   AGTATACTAATTAAT   GAAAGAGAGTAATTGCTT ATT AGGCAATTACTCTTTTTC   TATGTACATCTTAAT 100 39
 JI729_11280 2187361 .. 2187386 +  -8.3  -4.84761   ATCTAGTTTGAAAAA         CCGGGGAATCG ATAA TGATTTTCCGG          TTTTTATCCCGCTAT  87 40
 JI729_11290 2188522 .. 2188569 +  -9.4  -6.07969   ACTTTGTTTTGAAAA GAGATTATTCTACTAGATCGTT GTGA AACGGTTTCATAGGATAATCTC TTTTTTTTAGTTTTG 100 68
 JI729_11300 2190322 .. 2190334 +  -3.5  -3.39036   GAAGGGATAAAAGAA                TAAAA ATA TTTTA                TTATAAATAGTGTAT  50 23
 JI729_11305 2191480 .. 2191490 +  -2.6  -3.29263   TTTTAAATGTCTATA                 TAAA TGC TTTA                 TTATGGAGGAGCTAT  45 35
 JI729_11310 2192110 .. 2192135 +  -8.4  -5.20783   ATATAGATGAAAAAA         CCGTATTCTT TTCATT AAGAATGCGG          TTTTTGTATTTACAT  93 35
 JI729_11315 NONE
 JI729_11320 2195884 .. 2195912 + -16.9  -5.90231   AAAGCATTGATATGT        TGCGGTTTCTCTT GAG AGGAGAAACCGCA        TTTTTTTATATTTGT 100 43
 JI729_11350 2201834 .. 2201862 +  -6.9  -5.56673   ATTATTAATTAAAAG       GACAGA-TCCTT AATGAA AAGGAATCTGTC        TTTTTTGTTCTACAT  90 29
 JI729_11355 2203744 .. 2203778 + -17.5  -5.00884   AAACAGGGGTTTGCA     TATAGTCCTTCCTAA TAAAT TTAGGAAGGACTATA     TTTTTTGGGGAAAAT 100 64
 JI729_11365 2205477 .. 2205522 + -17.8  -4.79352   TATTTTTATGTCACA TCCCTCCTTAATCGTTCGTC TTGTAT GTAGAACGATTAAGGAGGGA TTTTATTATGAATAC 100 67
 JI729_11370 NONE
 JI729_11375 2207693 .. 2207712 + -10.8  -5.80727   AAAAATATAAAAAAG            CGCATTTC TTCA GAAATGCG             TTTTTTATTATTTTT 100 31
 JI729_11385 NONE
 JI729_11390 NONE
 JI729_11395 2211065 .. 2211098 + -12.7  -5.86332   ATAAATAGAAGAGAT     CGCCTAAAAAGTTGAA TGT TTCAGCTTTT-AGGCG     TTTTTTTTGAATTGA 100 33
 JI729_11400 2212373 .. 2212418 + -15.8  -4.43879   AGTGAACTACGAAAA TAAAAGTAAGAGCCCGCATT CAAAAA AATGGGGGCTTTTACTTTTA TTTTGCTTGAATAGT 100 23
 JI729_11410 2214512 .. 2214541 +  -2.9  -3.15758   TTAATTAGTTAGGGG       GAAGCGTTATGAA TAAG TTTGTCACGTTTC        TTGATAAAAACTTAT  43 29
 JI729_11415 2215824 .. 2215846 + -10.7  -3.96618   ATGCTGTTATTTTGA           GTGATAGAC TTTTT GTCTATCAC           TTCTTTCACATTAAA  95 46
 JI729_11420 NONE
 JI729_11425 NONE
 JI729_11430 NONE
        plsY 2218931 .. 2218959 +  -9.7   -5.4833   AATAAAATGAATGTT        TAATAAGTGGGGA TAA TCTCCACTTATCA        TTTTTTATTAAATAG 100 36
 JI729_11440 NONE
        tdcB 2221661 .. 2221692 +  -6.8  -4.70266   AATAGCTTTATAAAA      G-AAGAGCTAAGA GAAATAG TCTTAGCTCTTAC      TTTTTGCCTACTGTT  80 36
 JI729_11450 2222372 .. 2222402 +  -6.2  -5.72254   TTTTAAGAATAAATG      GCAGCCT-TACTC TAATAT GAGAATAGGCTGC       TTTTTTATTATTTCA  95 45
 JI729_11455 2223756 .. 2223789 + -10.4  -2.55487   TAAGAACAAATAAAA     GGGAGTCAGAACTT AGGGAC AAGTGCTGATTCCC      GATTTGTTTACGGTT  78 51
 JI729_11465 2225227 .. 2225254 +  -6.3  -5.31059   ATAAAATAATGAAAA        CCGGTCTTTCC TAAATC GAAAAGATCGG         TTTTTTAGTTCATAT  82 37
 JI729_11470 NONE
 JI729_11475 2227099 .. 2227120 +  -7.3  -6.04953   GTTATAATTGTAAAA           GAGTCGCAA AATA TTGTGGCTC            TTTTTTTGTTTGTAT  95 44
 JI729_11485 2229791 .. 2229805 +  -7.8  -2.80816   TGTTTGGGTATTATA               GACCGG CAG TCGGTC               TATGCTAAATGAAGG  66 49
 JI729_11490 2231143 .. 2231154 +    -3  -4.08706   ATTTATTTCAATTAC                GAAT CTAT ATTC                 TTTGTCTAATAGCCA  55 92
 JI729_11500 NONE
 JI729_11505 NONE
 JI729_11510 2235465 .. 2235492 + -12.9  -2.89304   AAGGCTCTTAAAATA        GAAAAGGATGG TGCTTT CCATCCTTTTC         CTTATGTATTTTGAG 100 76
 JI729_11520 2237995 .. 2238008 +  -2.4  -3.44051   CAATAAAATTCACAT               TTCC GAAAGG GGAA                TTATAATGATAAAAC  45 173
        gpmA 2238733 .. 2238744 +    -3  -4.72272   TGAAGGGGAAATTCC                GAAA CATA TTTC                 TTTTTAATACGAAAA  64 7
 JI729_11530 2239727 .. 2239747 +  -9.8  -4.84914   TATTTTAGTAAATAA            GGACAGAA TCTTT TTCTGTCC            TTTTCTTCTATACAT 100 26
 JI729_11535 NONE
     spoIISB 2240200 .. 2240230 + -14.3  -5.99154   TACAGGTGAAAAAAA       CAAAAGAAAATGC ATAGA GCATTTTCTTTTG       TTTTTTTATTTAATA 100 9
        pepD 2242324 .. 2242349 + -11.3  -5.47159   ACGACGAAATAAAAA         GGAGTCTATAA AAAT TTATAGGCTCC          TTTTTTGTATTGGAA 100 43
 JI729_11555 NONE
 JI729_11560 2244086 .. 2244134 + -13.6   -2.9348   TTTGAAACCTAATAG TGTATATAAAAAGGTTAGAGAA GTTAA TTCTCTAACCTTTTTATATTAA TGTCTGAAATTTAAA 100 121
 JI729_11570 2245751 .. 2245761 +  -2.6   -2.5293   TAAACAAGAAAGAAT                 TTTA ACA TAAA                 CTATTCCTAATTGTT  40 38
 JI729_11575 2246199 .. 2246219 +  -5.4  -5.68489   ATATACTTGGAAAAA            GTCCTCTA TCATT TAGGGGGC            TTTTTTATTGTTATC  91 67
 JI729_11580 2247949 .. 2247985 +  -9.5  -3.66742   AGAGAGGAGGGCTGA    TGGGGAGGTTTGGGGTA TAA TAGCTCAAGTCTTCCCA    TATTCTTTGTATGGA  81 46
 JI729_11585 2248809 .. 2248821 +  -3.4  -3.66883   TTCATGTTCTTATTG                CAGT ATTAC ACTG                TTTAAGATGTGTTCA  50 80
 JI729_11590 2249681 .. 2249702 +  -6.6  -6.07374   AATCAGTTAGAAAAA           CTACATCC AGTATA GGGTGTAG            TTTTTTATTTTTTGT  95 40
 JI729_11595 NONE
 JI729_11600 2252688 .. 2252723 + -11.2  -4.32482   AGTAAATATACGAAT    ATGACCGATTCCTTAG TATA CTTGGGAATCGGTCAA     TTTTGGATTCTAAAT 100 39
 JI729_11605 2253941 .. 2253968 +  -3.5  -5.33405   TGTAGGATAGGGAAA        GGTGCATATAC TTTAAT GTATATATACC         TTTTTATTTAATAGG  73 525
 JI729_11610 NONE
 JI729_11615 NONE
 JI729_11620 NONE
 JI729_11625 2281893 .. 2281940 + -15.2  -3.84619   TTTGATGATATTACT GAGGAAAGGTGCATATTTTCAT TGAT ATGTAAATATGCACCTTTTCTA TTGTATTTGCAATTT 100 241
 JI729_11630 NONE
 JI729_11635 2283535 .. 2283558 +  -3.8  -5.30339   TATGCATGGCAAAAA          GACAATCGAG TACA TTCGGTGGTC           TTTTTCTATTTTCAT  73 106
 JI729_11640 2284348 .. 2284392 + -10.3  -5.75945   GCTAAACTTACAAAA TATCATCTGTGCATTTTGATG AAA TGTTAAAATGCCTAGATGATA TTTTTTTTGAAGAAT 100 497
 JI729_11645 2285828 .. 2285842 +  -3.5  -3.23452   ATAAGGATTATTTCA               TCGCT TCTGT AGCGG               TTGAGTTATCAAAAT  49 522
 JI729_11655 2287249 .. 2287304 + -15.9  -3.15236   TTGGCTCGTATATTC ACCTTAAACTAAAAAGAACTTGTAG AGAGTC CTACAAGTTCTTTTTGTTTTAAGGG TTAAATGTGGATTTC 100 225
 JI729_11660 2288146 .. 2288190 + -10.3  -2.94827   GGGACCTTGATCACG CAAATGATCTGTAAACCAA TTCATTT TTGATATACAGATCATTTG TATAATAATTTTTAT  79 310
 JI729_11670 2291137 .. 2291185 + -13.5  -3.98842   CCGCTAAAATACTAT GAAAAGATACTAGAGACTACTAC AAT GTGATATTCTCTAGTATTTTTTC TTTATCCATATTATC 100 415
 JI729_11680 2292092 .. 2292115 + -11.8  -3.98448   TGTTTTTAATGCAAA          TAAGCTGTCC GTTT GGGCAGCTTA           TTATATTTATTACTA 100 41
 JI729_11685 2292951 .. 2292975 +  -7.8   -4.9218   TAATTAGTAAAAAAA          GGAAGAGGCC TATTT GGCTCCTTCC          TTTTTCTCATACATA  88 241
 JI729_11690 2294651 .. 2294671 + -13.3  -5.55664   TTAATCGACCATAAA            GCCGAGTGC AAT GCACTTGGC            TTTTTTTAATCGTCC 100 27
 JI729_11695 2295777 .. 2295793 +  -6.7  -3.29471   TTCGATAATTAATAT              TTATACA AAA TGTATAA              TTAATATACTAAAAC  64 65
 JI729_11700 2297056 .. 2297066 +  -2.6  -4.01158   TTTAAGCAATATAGC                 TAAT CTT ATTA                 TTCTTTAGTCACATT  52 7
       sdaAA NONE
 JI729_11710 2299702 .. 2299730 + -11.1  -5.77632   GAAATCATGGTTTTG        GACAAACTCCTCA CAT TGGAGAGTTTGTC        TTTTTTTATCATTTT 100 131
 JI729_11715 2300117 .. 2300146 +  -9.4  -4.82901   AGTGTTTCATAAAAA       GTGCTCCTATAT ATATAA ATTTAGGAGCAC        TTTTTATGGAGAGAA 100 29
 JI729_11720 2300583 .. 2300606 + -11.1  -4.60041   GTCGTTAGAACGAAA          GGCAAGCAT TGATAT ATGCTTGCC           TTTTTGGGAGTACAT 100 33
 JI729_11725 NONE
        splB 2302228 .. 2302252 +  -9.3  -4.44355   GCGGTTGTATGAATA          TAAGTCCGGTA TTG TACCGGGCTCA          TTCTTTTTAACGTTG 100 214
 JI729_11740 NONE
 JI729_11745 NONE
 JI729_11750 2305259 .. 2305269 +    -4  -3.57418   ACTGACAATAATTCC                 TTGT TGT ACAA                 TTGATTTCATAAATG  52 375
 JI729_11770 2306358 .. 2306397 + -12.4  -5.59502   CACAATATCAAACGA  GAGTGATGAGGATTCC AAATTTAC GGAATTCTTATCACTC   TTTTTTAGTTTTTTG 100 141
 JI729_11775 2308591 .. 2308613 +  -3.5   -5.2422   TTAAATTTCAAAAAA           GCATTCT CGATTAGAA AGAATGC           TTTTTTGCTGTGATT  73 127
 JI729_11780 NONE
 JI729_11785 2310243 .. 2310280 + -15.1  -5.70761   TAGATTCTATATGGT   AAAAGAGGAAGGTTCAT TAAA GTGAACCTTCCTCTTTA    TTTTTATTTTCTTTT 100 24
 JI729_11795 2314596 .. 2314640 + -13.9  -3.31188   TAAAAAAATGAAATG TGAAATAAGAGATAGTGGCGA TCA TAGCTACTATCTCTTATTTTG TTAATAATTCTCATA 100 90
         bla 2315737 .. 2315762 + -10.5  -5.21506   TATAAAGTTAGAAAA         CGACTCTTTTC TTGT GATAAGAGTCG          TTTTTGTATTCTTAT 100 84
 JI729_11805 2316765 .. 2316790 +  -6.3  -5.60993   GGCCAGAGATTGTAG         TCGTGCAG-TTA AAT TAAGCTGTACGA         TTTTTTTATGCAAAA  90 9
 JI729_11810 2317268 .. 2317318 + -15.8   -4.0648   AATTTATAGTTTAAA TGAAACAGAGTCGATTTTAGGA AATGAAA TTCTAATGTCGACTCTGTTTCA TTGTTTAATATCGTT 100 46
 JI729_11815 NONE
 JI729_11820 NONE
 JI729_11825 2319896 .. 2319925 + -10.9  -4.60678   ACATTTAAGCAAAAT       AATAAATCGCCTT TAAA AAGGCGATTTATA        TTTGTTATATTTTTG 100 67
 JI729_11835 2321506 .. 2321535 +  -5.1  -5.66684   ATTTCGACAAGAAAA       CTCCTATGTTGTT GTAG AACAATGTAGGAA        TTTTTTTGTGCATTA  91 55
 JI729_11840 NONE
 JI729_11845 NONE
 JI729_11850 NONE
        mvaB NONE
 JI729_11860 NONE
 JI729_11865 2327706 .. 2327719 +  -8.1  -4.24342   ATATCCAGTTTAAAA               GCCCT ATTT AGGGC                TTTCTTGCTCAAAAA  81 28
 JI729_11870 2329703 .. 2329726 +   -14  -5.59879   TTATAAAATTAGAAA          GGAGCTCTAT ATAA ATAGAGCTCC           TTTTTTATGTTTATA 100 35
 JI729_11880 2331388 .. 2331413 + -13.5   -4.6038   TATGCTGCTTTTTTG         TAAAGCCATTC ACAT GAATGGCTTTA          TTTTAATTTCATATA 100 42
 JI729_11885 2332484 .. 2332505 +  -4.5  -3.75665   ACTTATCAATTCGCT           CTTTTTTTC CTTT GAAAAACAG            TTTGATAAGATGTGG  57 499
        yqeK 2338357 .. 2338371 +  -5.8  -3.26722   AAAACCCCCACTGAT               TAAAGT TTC ACTTTA               TATTGTACATATCAA  59 469
        mtnN NONE
 JI729_11935 2340405 .. 2340423 +  -3.9  -3.97026   TATTACTCTAAGAGC             GGAAAGA TTTAT TCTTTTC             ATTTTTTATTTAGCC  56 30
 JI729_11940 2341031 .. 2341071 + -12.9   -3.0464   AGGGATATTACATAT  TGAAGAGGTGGCTTTTGTA GAT TACAAAAGTCATCTTTTTA  TGTTAGGAATAGATT 100 90
 JI729_11945 2343935 .. 2343978 + -12.8  -4.15044   TTACATTAGAGAATT TTTAG-GACATGAGTTCGGTA TTA TACTGGACTCATGTTACTAAA TTTGTTGAAGAAGGA 100 137
 JI729_11950 2344649 .. 2344662 +  -5.9  -5.72622   CCTATGATTTCATAA               GTCGC AAAT GCGGC                TTTTTTATTTGTACG  93 66
 JI729_11955 2345539 .. 2345549 +    -4  -3.61103   CAGTTGACCCTCACA                 CAAT GTC ATTG                 TTTAAGATAAAGTTG  53 236
 JI729_11960 2346417 .. 2346445 + -12.7  -4.77079   TAAACAAATAAGTAA        TAAAAAAGGCATG TTT TATGCCTTTTTTA        TTTTATTAATATCTC 100 30
 JI729_11975 NONE
 JI729_11980 2349217 .. 2349243 + -12.4  -4.96848   TATTTTAGCGTAAAA         GCTGCTTTTCAT TTA AAGAAAAGCAGC         TTTTTGTGTGGAAAA 100 43
 JI729_11985 NONE
 JI729_11990 2351051 .. 2351086 + -10.6  -5.47431   TCCTAAACAATTAAA    CTTACCGCTTTCTATT TAAG GATGAAAAGCGGTAAG     TTTTTTGTATATTCG 100 7
 JI729_12005 2353126 .. 2353158 + -10.6  -3.70751   AAATAAAATAAAGAA      GGAAGCTGAACCTA AAATA TAGGAACAGCTTCC      TTCTTACAATTGTTC  89 4
 JI729_12015 NONE
 JI729_12020 NONE
 JI729_12025 2357848 .. 2357884 + -13.2  -3.47841   AGTTTCATGAAGTAT    GATAACTTCCCTGACG TTAAC TGTCAGGGAAGTTATA    TTATAATATCCATAT 100 24
 JI729_12030 2358802 .. 2358824 +  -4.8  -5.27335   CGTTAATACTTTTTA           GAGCACCTGA TTG TTGAGTGCTC           TTTTTGTTTAGGACA  77 271
 JI729_12035 2359516 .. 2359534 +  -3.8  -2.69471   GGTTGTGTAAAGTGA             GAAGGGGT GTT GCTCTTTC             ATTATGTACAAATCG  44 413
 JI729_12040 2359800 .. 2359815 +  -6.8  -5.55855   AAGTTTAATCTATAC              GCATCC ATTT GGGTGC               TTTTGTTTTTTTGAC  90 39
 JI729_12045 2360490 .. 2360516 +  -3.1  -6.07374   ATTTCTTATGTGAAA        TGCCAAT-ATAC AATT GAATTATTGGCA         TTTTTTATTTTTTCT  88 40
 JI729_12050 2361473 .. 2361506 + -11.2  -5.99154   GTATCTCAAAATCCC     CAAAAGAGCACTTG CGGAAA CAAGTGCTCTTTTA      TTTTTTTGTTTCATA 100 159
 JI729_12065 2363666 .. 2363689 +   -11  -6.04378   AGTTAGAAATAAAAA          CGGCAAGCTA GAAT TCGCTTGCCG           TTTTTTTTATAGTTT 100 183
 JI729_12080 2365873 .. 2365896 +  -6.8  -5.37593   ATAAGGGACGAAAAA          GGATACTTTT GTAT AAAAGCATCC           TTTTTTAATTTACGG  89 41
 JI729_12085 NONE
 JI729_12090 2367680 .. 2367718 +  -9.9  -5.06052   TGTGTAAAAAGTGAT  CAAGGCTAAAGAACGTTG GAGA TAA-GTTTTTTAGCCTTG   TTTTGTATTTTTTAA 100 34
       abc-f NONE
 JI729_12100 2370372 .. 2370389 +  -9.9   -4.6575   CGTTTGGTAGTAAAA             GACCGAT AGCA ATCGGTC              TTTTCTCATTTATAT 100 41
 JI729_12105 NONE
 JI729_12110 NONE
 JI729_12115 2374031 .. 2374069 +   -17  -5.04601   AAAAACCTTAAAAAA   GAGTTCGAAGTTGATAAA AAT TTCATCAGCTTCGAACTC   TTTTTAGTTTATAGA 100 30
 JI729_12125 2375971 .. 2376008 + -15.8  -3.65812   ACCGAAATAGGTAAT   AATAAAGCGCTCTCGA TGGAAT TCGAGAGCGCTTTATA    TTATATTGAAAGAGG 100 31
 JI729_12130 NONE
 JI729_12135 NONE
 JI729_12140 2379747 .. 2379770 + -11.2  -6.09196   ATACTGTCAATTTCA          CTTTCTTTAC GCCT GTAAAGAAAG           TTTTTTTATTTTACA 100 237
        tenA 2380546 .. 2380579 +  -9.9  -5.55769   AGAATAGAAGTAATG     T-TATAGATAGGTGTG GAT CATACCTATCTATATA     TTTTTTCTTGTCAAA 100 41
 JI729_12150 2381252 .. 2381265 +  -8.1  -5.80364   GAAATAGAATGAAAA               GCCCT AATT AGGGC                TTTTTTTGTTGGAAT 100 86
 JI729_12155 2382326 .. 2382354 + -10.5  -5.89921   ATGTGATGGATAAAG        CAATGACTAGATT TAA AATCTAATCATTG        TTTTTTTCTTATGGT 100 285
 JI729_12160 2383066 .. 2383080 +  -2.8  -5.88061   TATTTGTAAAGAGAG               CACC GATTTAA GGTG               TTTTTTTAGTTTTTT  85 48
 JI729_12165 2384291 .. 2384308 +  -2.7   -4.8667   TTATACCTACTTTGT             GTGTCAT CCTA ATGAAAC              TTTTTCTAAAATGTG  65 270
 JI729_12175 NONE
 JI729_12180 2387101 .. 2387140 + -17.5   -4.0896   AAAGGTTTATATATA  TTACAAATGACATCGTC AATTAA GACGATGTCATTTGTAG   TTTTAGGAGAAATTT 100 51
 JI729_12185 2387364 .. 2387388 +    -8  -4.62783   AAGTTATGTAAAAAA          GACTATCTAA CTTTT TTGGATAGTC          TTTTTACACTACATA  83 30
 JI729_12195 2388140 .. 2388162 + -10.8  -3.55604   AAAATTTTTTGTCCA           TAACTTAACT TAT AGTTAAGTTA           TATTTGGTTAAGTAA  90 23
 JI729_12200 NONE
 JI729_12205 2388604 .. 2388614 +  -2.6  -2.69073   CATGGCAGTGGGTCC                 TTTT CAA AAAA                 TAAGTTGTTATAAGT  40 2
 JI729_12210 NONE
 JI729_12215 NONE
 JI729_12220 NONE
 JI729_12225 NONE
 JI729_12230 NONE
 JI729_12235 NONE
 JI729_12240 2391695 .. 2391713 +    -9  -3.01712   AGTGATGCAAAAAGA             GTACATAT CGA ATATGTAC             TCTTGAAAAAAGGAA  72 65
 JI729_12245 2395175 .. 2395197 +    -5  -2.63301   CTATACTATATTTTA           TGTTTAATGA AAA TGATTAAACA           TGCTATGAGAATGTG  51 158
 JI729_12250 2395645 .. 2395680 +  -6.9  -2.52623   TTTATTATAGATAAA    TAGGTGACTCAGCAA TTGTGC TAGTCGAGTCACCTA     GTATTATCGAACCAA  59 62
 JI729_12270 2399803 .. 2399824 +  -8.7  -2.59431   AGTTTCATAAAAAGA           GCAGCTAGC AAAA GCTAACTGC            TCGCTTCTCCAAGGG  70 31
 JI729_12275 NONE
 JI729_12280 2401521 .. 2401572 + -10.4  -5.45802   GGCTAGAAAACTAGA GGACACCAATTCATTAAAGCAGC AATTCAA GCTGTTTTAG-GGATGGGTGTCC TTTTTATTTTGAAAA 100 73
 JI729_12285 NONE
 JI729_12290 NONE
 JI729_12295 2402820 .. 2402832 +  -2.7   -4.0825   TTTGTAATTTGTATT                CTTAA TAT TTAGG                TTATTTAGTTGCCAA  53 53
 JI729_12300 NONE
 JI729_12305 2404735 .. 2404773 +  -7.7  -5.24796   ATGAAGATAAAGGAA   GAGGATTGAATAAAA GGTTTATAA TTTTATTCAATCCCC   TTTTTATTGTGTAGA  90 43
 JI729_12310 2405929 .. 2405946 +  -7.7  -5.18726   ATAAGTTTACTTAAA             GCATTCC ATAT GGAGTGC              TTTTTATTATGCAAA  90 37
 JI729_12315 2406325 .. 2406341 +  -2.2  -3.46659   AATGGAAATGGCGAG              GGCTTT CACGC AATGCC              TTGATTATGAATATG  45 143
 JI729_12320 NONE
 JI729_12325 2407093 .. 2407107 +    -5  -4.25104   CTTAAACGCCCCCCG               GTCAAA AAG TTTGGC               TTTTAGTAGGAGGAC  67 36
 JI729_12330 NONE
 JI729_12335 NONE
 JI729_12340 NONE
 JI729_12345 NONE
 JI729_12350 2412268 .. 2412289 +  -7.3  -2.78867   CAACGCCCTAATCCA           TCCTCTCCT GTTG AAGAGAGGA            ATTATTCAGCATTAA  63 30
 JI729_12355 NONE
 JI729_12360 NONE
 JI729_12365 NONE
 JI729_12370 NONE
 JI729_12375 2414433 .. 2414452 +    -5  -5.49568   CAACTTCAGCTTAAA            GCCCTA GTTTCATA TAGGGC             TTTTTCTTTTGGATT  82 27
 JI729_12380 2415021 .. 2415043 +  -9.9  -4.62069   GTCTTGTATTGTCTA           GTCTCTGGA ATAGA TCCGGAGAC           TTTTTGGCATGAACC 100 82
 JI729_12385 2416949 .. 2416967 +  -4.6  -3.06302   TCATAAGAGAACGGG             CGTGAT GTTGCGA ATCACG             TTGACTACAAATGAT  52 251
 JI729_12390 NONE
 JI729_12395 NONE
 JI729_12400 NONE
 JI729_12405 2424362 .. 2424377 +  -4.6   -5.8901   GATACTACAGATTAA              GCGTGC ATAA GCAGGC               TTTTTTATTTTGTAT  91 40
 JI729_12410 2424664 .. 2424683 +  -8.6   -5.7946   TAAATTCGCAGGAAA            GTGATCGT ATAT ACGGTCAC             TTTTTTTATTGAAAG 100 22
 JI729_12415 NONE
 JI729_12420 2425852 .. 2425902 +   -13  -2.99719   GAAGCCTGTGTGTAT GTAAAGTAATTAAAAAGCTGAC ATAATTA GTCAGCTTTTTAATTACTATAA TCTAGTATTTATCAG 100 102
 JI729_12430 2428302 .. 2428333 + -11.7  -3.58446   TTAAATACTAGTAAA      CAAATCCTGCTCG TTATAT CGATCAGGATTTG       TCATTTTTTTATGTA  95 37
 JI729_12435 2429281 .. 2429318 + -10.1  -5.74122   TGAAGTTTAATAACC   CCGTAATGACTTATC TTAATATT GATAAATCATTACGG    TTTTTTTATGTAATG 100 41
 JI729_12440 2429801 .. 2429813 +  -3.5    -4.431   TTATCTTTATCTTTC                TTATT AGC AATAA                TTTTGTGAGTGAATA  62 5
 JI729_12445 2430367 .. 2430395 +  -9.7    -5.252   AAACCTCTAATCACA        TAAGAGCATCC AATTGCA GGGTGCTCTTA        TTTTTTATGAAAATC 100 247
 JI729_12455 2431923 .. 2431946 +  -9.7  -4.75776   TTCTATTTTTGAAAG          GCTCGTATT TTTAAT AATACGAGC           TTTTTAAGTTGAATT 100 49
 JI729_12460 2432456 .. 2432486 + -14.2  -5.93252   TTCGCATAAAGAGAA       GTGGGAGAGTGAAA CGA TTTTACTCTCTCAC       TTTTTTATTTTTCAA 100 32
 JI729_12465 2434077 .. 2434106 +    -8  -5.36441   TATATGATTTGTGCT       GCCTCCTGT-TCA GAACA TGAAATAGGAGGC       TTTTTTATGTCGACA  95 257
 JI729_12470 NONE
 JI729_12475 2436039 .. 2436084 +  -4.1  -2.62184   GGATGACAAATAGTA TCATACCTCCGAATTTTGTTA ATGA TAATAGAACAAGGAGGTGTGA TACTATGGCACAAGA  46 46
 JI729_12480 2436254 .. 2436276 +  -7.7  -4.73613   GTGTAAATTCTTTAA           GGGTAGCCA AATCG TGGTTGCCC           TTTTATTAATGATAG  85 35
 JI729_12490 2438209 .. 2438232 +  -7.5  -5.72622   AAATAAAAATCTTAA          CAAGGTGCA TACATT TGCATCTTG           TTTTTTGTTTCTCAA  95 35
 JI729_12495 2438889 .. 2438930 + -18.5  -5.05712   TTATAATTCATAGTT TAAAATCCAAAGCTTTTTT AAAA AGAAAAGCTTTGGATTTTA  TTTTTAATTATTTCT 100 28
 JI729_12500 2439922 .. 2439951 + -15.3  -5.07486   AATGTAATTAAAAAA       GAAAAAAGAATCC AAGT GGATTCTTTTTTC        TTTTTATTAGGGGTA 100 34
 JI729_12505 2442161 .. 2442210 + -16.1   -5.5762   TCTTAAATCAATTAA TACCCAATAACAAAGCGATTAGT GAAA ACTAAGCTTTTTGTTATTGGGTA TTTTTTATATTTAAT 100 35
 JI729_12510 2444524 .. 2444553 +  -2.9   -4.9725   TTAAAATGTACGAAA       CGTCTCTAG CATTCCTGTAAA CTAGAGGCG        TTTTTATCTGGAGAT  64 37
        lepB 2445224 .. 2445243 + -10.8  -5.82172   CCTTATCACGGTTAG            GCATCTAC ATAG GTAGATGC             TTTTTTTATGTTGAT 100 130
 JI729_12520 2446615 .. 2446652 + -18.1  -3.78934   AAATAGTCGTAACTA   TATACAAGCATAGAGGT TCTC ACCTTTATGCTTGTATA    TTCTTATCCAGCAAA 100 75
 JI729_12530 NONE
 JI729_12535 2449998 .. 2450008 +  -3.2  -2.85364   ATAGGAGGGAGGAAG                 GTGC ATA GTAC                 ATATTTTCATCGTAT  43 18
 JI729_12540 2450800 .. 2450817 +    -7  -4.70739   GGTATCCATTTTAGA             GCACTC TTACAT GAGTGC              TTTTACTTATTTTTA  80 27
 JI729_12545 2451094 .. 2451149 + -18.8  -2.68109   ATTGAAGATACTTAT GTATCGAAACAAATAAAAAAGGAGCG ACTA TGCTCCTTTTTTATTTGTTTTAATGC GTATTCTTACTATAT 100 78
 JI729_12560 2453925 .. 2453974 + -19.1   -3.3514   AAATTAATTTTGTCT ATTAAGAATAAGAAAAGCCACTT AGAT AAGTGGCTTTTCTTATTTTTAAA TTATGGGATATACCT 100 83
 JI729_12585 2459657 .. 2459690 +  -7.5  -3.30771   TTATTTAAACAAAAA     GTGCTAACAAGTTTG CAAA CGAACTTGCTAACAC      TTATACAAAATATAC  66 232
 JI729_12595 2461388 .. 2461418 +  -2.5  -6.04324   CTAACTAGTTTTGAA       ACCTCTTCCTACA CTTTT TATAGGGAGGGGA       TTTTTTGTTTTTTCA  86 57
 JI729_12600 2462700 .. 2462714 +  -4.3  -3.36762   GAGAAAAGTTTAAGC               CCATT TTCAT AATGG               TATTGTATACTGTGT  50 208
 JI729_12605 2463379 .. 2463406 + -16.4   -4.9218   ATTTTCTTATAAAAA        GTTCCCCTTTGG AAAT CCAGAGGGGAAC         TTTTTATAGTAAATA 100 40
 JI729_12610 2465802 .. 2465822 +  -8.4  -5.07107   TTCAAACTTGTTGAA            GAACCTAT ATCCA ATAGGTTC            TTTTTTAAAAATTTA  93 41
 JI729_12615 2466586 .. 2466603 +  -2.7  -2.74012   AGCGTGACACGCGAA             TTAGAAC GATT GTTCAAA              TCCTTACACTCGTCC  41 39
 JI729_12620 2467780 .. 2467814 + -10.8  -6.04419   CACCGCGATGATAAA     TCTCGTCCCTAAGATT AAA AGTCTTGGGGGTGGGA     TTTTTTTATTGTTTT 100 327
 JI729_12625 2469099 .. 2469120 +  -6.6  -3.30124   AAAGTGAAACTTTAA           TCAG-GGGG CATCC CCCCACTGA           TTATCAGCCCTCACC  64 34
 JI729_12630 2470469 .. 2470491 + -12.2  -4.63172   TTAGTTAACGAGGAA           CCCTTTATTT AGT AAATAAAGGG           TTTTATAATTTCATA 100 115
 JI729_12635 2471258 .. 2471280 +  -2.7  -5.69262   AAACGAGTTATTAAA           GGCGTAC GAGTAAAAA GTACGTC           TTTTTATTTTTATAA  81 47
 JI729_12640 NONE
 JI729_12645 2472479 .. 2472511 +  -5.7  -5.52384   AATAATGTATAAAAA      GAAGAAAATCGGG CAAATAC TTCGGTTTTCTTC      TTTTTTTCGTGAAAA  88 36
 JI729_12650 2473484 .. 2473502 + -13.2  -5.72053   TTATTAAGAGGAAAA             CCCGTGAA TAA TTCACGGG             TTTTTTATTTAATTG 100 34
 JI729_12660 2475663 .. 2475706 + -19.2  -4.41609   AAGATAAGGGCAATC CCGTCAAAAAAAGTCCGGTT TTAT AACTGGACTTTTTTTGACGA TTTATATTTATACTC 100 34
 JI729_12670 2478891 .. 2478922 + -14.6  -2.86343   AGTTTCATAAATTAT      AAAAAGCGCAGGAT CATC ATCCTGCGCTTTTC       TATCGTAATTCAGCT 100 269
 JI729_12680 2480968 .. 2480978 +    -4  -2.57344   CGTCTTTATATAGGA                 GATT ATA AATC                 GTTATGAAAAAGATA  46 57
 JI729_12685 2481956 .. 2481981 +  -4.7  -5.87996   AGAAAATACCAAAAA         CCGCAACTGGA AGAC TTAAGTTGTGG          TTTTTTTATTGCTTC  91 121
 JI729_12690 2483000 .. 2483017 + -10.5  -3.65475   AAAGTAAAAATAAGA             GCCGTCC TGTT GGGCGGC              ATTTTATTTTAAATA  85 34
 JI729_12700 2484302 .. 2484338 +  -6.9  -2.77791   GGTAAATAAGATACG    TAAAAAAATCCTC CAAAAACAAAA GAGGATTTTTTTA    TGCTGTTAACTTCCG  60 36
 JI729_12710 2486925 .. 2486935 +    -4  -4.57353   ATTTCAGTTAAATAT                 TGTA TGT TACA                 TTTTATGTAGTAAGC  65 114
 JI729_12715 2488365 .. 2488386 +  -9.5  -4.99972   TGGTTACTCAAGAAA           GGAATTAGC ATAC GCTAGTTCC            TTTTTAATATTTTGT 100 54
 JI729_12720 2489401 .. 2489411 +  -2.6  -3.77639   AAAATTCATTCAAGA                 TTTT ATA AAAA                 TTATGTTATAAGTTG  50 4
 JI729_12725 NONE
        cutA NONE
 JI729_12735 NONE
 JI729_12740 2491270 .. 2491314 + -12.5  -3.18381   GATCAAAACTATTTT ACATGAAAGAAAGGTGTAAAT ACT GTTTATACTTTTCTTTCATGC TGTAATTTTGTATTA 100 49
 JI729_12745 2492365 .. 2492389 +  -3.6  -3.35798   GGTAATAGGGCATAA          TTACTCCTAT AACAA AAAGGAGTGA          TTGTAAGTGAAAGAT  49 26
 JI729_12750 2492688 .. 2492708 +  -9.8  -5.07275   ATATAACCTGCAAAA            GACACTTC TTTAT GAAGTGTC            TTTTTGTGTATATGA 100 174
 JI729_12755 2494037 .. 2494055 +  -9.6  -5.36441   GCTTGATACTAAAAA             GAGTCCTA ATA TAGGGCTC             TTTTTTATGTAGAGA 100 35
 JI729_12760 2495058 .. 2495092 +  -8.8  -5.38047   ATACTAAAACTGCAA    GAACGTACTTT-GGA TAATCT TCCTAAGGTACGTTC     TTTTTTATATCAGTA 100 124
 JI729_12765 NONE
        dnaN NONE
 JI729_12775 2497897 .. 2497925 + -13.3  -5.28983   TAAATACAGAAAAAA        GAGCGAATTCTTT ATA AGAGGATTCGCTC        TTTTTATATTTTAAA 100 44
 JI729_12785 2500101 .. 2500135 + -11.7  -5.35365   TTAGTCAATTTCAAA     GCAACTTGTTTAATT ATTAA ATTTAAACAAGTTGC     TTTTTATTATGTTTT 100 155
 JI729_12815 2505399 .. 2505425 +  -8.8   -5.1471   AAAATAACATAAAAA         GGTAAAGCGTAT TTT AAATGCTTTACC         TTTCTTTTTTGTAAT 100 124
 JI729_12845 2509563 .. 2509588 +  -7.6  -5.54885   AATCTAAATAAAAAA         CAATCCTTGC ATATTA GCTAGGATTG          TTTTTTATTAATGTT  95 40
 JI729_12870 NONE
 JI729_12875 2513530 .. 2513566 +    -9  -4.13767   ACAAAAATATGTATA    AATAAAAAGATTAGGG TTCAC TCCTAATCTTTTTATA    TTTTGAGGTAGCACC  83 55
 JI729_12900 2517398 .. 2517436 + -16.3  -3.75105   TTACACCAAAAATAA   TAAAGATAGCCGCTTCT GAATA AGAACCGGCTATCTTTA   TTATTCATAACTTAA 100 3
 JI729_12925 NONE
 JI729_12930 2522830 .. 2522866 + -11.9   -4.9218   ATCTAAACATAAAAA   CAAACAAACTC-TCCT TTAAAT AGGACGAGTTTGTTTG    TTTTTGTAGTAAGTA 100 7
 JI729_12935 2523728 .. 2523749 +  -3.7   -4.7889   ACATTTGAAGAAAAT           GAGTCCTAT TTAT GTAGGGTTC            TTTTTCAGTATTTAT  66 40
 JI729_12940 2524208 .. 2524233 + -11.3  -4.67556   CAATTATAATAAAAA         GAACTTGTAGG ATAT TCTACAAGTTC          TTTTTCAAATATTAT 100 136
 JI729_12955 2528376 .. 2528401 +  -7.7  -5.63012   TACATATGAAAAAGA         GAGAAGAAC ATTGGTTA GTTCTTCTC          TTTTTGTTTATTTTT  95 328
 JI729_12960 2529720 .. 2529746 + -13.9  -3.32498   ATCGTTTAAATATAA         TAGCCGATTCT AAATA AGAATCGGCTA         TTAATATGTAAAATC 100 84
        secY 2550743 .. 2550768 +  -9.1  -5.86976   ATTAATTATAAAAAA         CACAGTTGG TTATTTTT CCAACTGTG          TTTTTTATTTTATCA 100 36
 JI729_13015 2553369 .. 2553383 +  -2.2   -4.4634   GCAAATGAAAATGTA               TAGTAT GGG ATATTA               TTTATTGTTGAGCTT  56 77
 JI729_13020 2554670 .. 2554705 + -22.1  -3.53012   TAGATAAATAACTAA    TGGAAGGGGGCACAA ATTGTA TTGTGCCCCCTTCCA     TTTACAAACAAAACC 100 38
 JI729_13035 2556907 .. 2556938 + -17.6  -5.20783   CAATATAAATAAAAA      GATGAGGTTTTCTA CATG TAGAAAACCTCATC       TTTTTATATTTACAT 100 29
 JI729_13075 2562214 .. 2562242 +  -7.5  -3.80019   CTGGATAAAGTGAAA        CCCCACTGT TAAAAACAGAC ACAGTGGGG        TTCTTGCATTTCTAA  71 131
 JI729_13105 2567489 .. 2567518 + -10.2  -4.39571   ACGGGGTTATATAAA       TAGCACACCTGTA ATAAA TAC-GGTGTGCTA       TTTTACATTTATAAA 100 23
 JI729_13115 2568402 .. 2568425 + -12.6  -4.21098   TTAAAATAATAAAAA          CGTTACTCAA TCCT TTGAGTAACG           TTTTCCCCTTAATAT 100 73
 JI729_13155 2574412 .. 2574433 + -10.2   -4.7629   GTATCTAAATAGAAA           GACCAGTC TTACAT GACTGGTC            TTTTTACATTCATAC 100 29
 JI729_13180 2577276 .. 2577308 + -10.8  -4.12037   CTATAAAAATTCAAA      CCACTATTCTCT CTTTCATTT AGAGAATAGTGG      TTTATCATATTTCTA 100 62
 JI729_13210 2583773 .. 2583790 +  -3.5  -2.82187   AACATATTTTAGCGA             TAC-ACCA TAT TGGTAGTA             CTTCTATTCCATATT  45 150
 JI729_13245 2587105 .. 2587151 + -11.5  -4.64486   CGTATGTGATCTGGA TGCAATAAAAAACACACTTTGTA TTA TA-AAAGTGTGTTTTTTATT-CA TTATTTTCTTTTCGT 100 32
 JI729_13260 2590222 .. 2590253 + -11.7  -4.85195   AAAGATTAATAAAAA      TAGGCTAGAGGGT TAGCAT ATCCTCTAGCCTG       TTTTTAACTTATTTT 100 32
 JI729_13275 NONE
        rpiA 2592687 .. 2592706 +  -7.2  -4.88711   GAAATTGTAATAAAA            GCTAACTT TTTA AAGTTGGC             TTTTTAGTATGTTCT  85 31
 JI729_13285 2593237 .. 2593273 + -11.1  -3.97413   TTATCATAATAAAAA    GGGTAGTATATGAAT CTTATGT ATTCATACACTACCC    TGTTTTATTAATAGA  95 32
 JI729_13370 2606800 .. 2606847 + -10.2  -4.58685   CTTTATTCGTTTGAA ATTGAACATTATTCAACAATCG GGCG CTATTGTTGAATAATGTTTAGA TTTTTAAACGACTTT 100 27
 JI729_13395 2612885 .. 2612906 + -10.2  -4.81083   TAAACCCCTTAAGTT           GACCTGCT TATATT AGCAGGTC            TTTTTCATAATTACA 100 140
 JI729_13400 2614094 .. 2614123 +  -8.6  -3.34962   AAAGTGAAACTTTAA       TCAGTGAGGGGT TTGTTC ATCCCCCACTGA        TTATCAGCTCTCACC  74 39
 JI729_13405 2614620 .. 2614645 +  -7.7   -5.4505   AAAATACCAAAAAAA         GAAAGCATCTA ACCC TGGATGTTTTC          TTTTTTATTAAAAAC  95 44
 JI729_13410 2615203 .. 2615219 + -10.9  -5.66229   AATCACCCCAAAAAA              GAGTACG CAT CGTACTC              TTTTTTATTATTAAT 100 39
 JI729_13435 2618749 .. 2618772 + -12.6  -4.50193   ACGAATAAACGATTA          TAAGGATAGC TAAC GCTATCCTTA           TTTTAATTCGTTAAT 100 33
 JI729_13455 2622509 .. 2622533 + -10.2   -5.8187   ATTTCACATAAAAAA          CGTTTTAAAC ATAAA GTTTAAAACG          TTTTTTTATTCAATG 100 249
 JI729_13495 NONE
 JI729_13500 NONE
 JI729_13505 NONE
 JI729_13510 2633974 .. 2634001 + -12.8  -3.35616   TGCACATACTAAAAA        GAGCTGCTGAGA TTAT TCTCAACAGCTC         TCTTCTCTACTCATC 100 16
 JI729_13525 2635782 .. 2635823 + -20.3  -4.20531   GAAGCCTTAAAAAAA CAAGCATCCCCCCGTCATA TACC TAGGACAGGGGGATGCTTG  TTTTCAATCAATATA 100 31
 JI729_13540 2638872 .. 2638901 + -10.1   -5.7827   AGAATATAACAAAAA       CCGCTATAAATTC ATTT GGAGTTATAGCGG        TTTTTTATTTATATT 100 40
 JI729_13545 2639250 .. 2639274 + -12.9  -4.20027   TCTATACTAAAAAAA          TCGGAACGGCT CAT AGCCATTCCGA          TTTCTATACTTTATT 100 31
 JI729_13585 2647503 .. 2647527 + -11.6   -3.0263   TATATTCATTCAATA          TAAAAAGCCC AATCC GGGCTTTTTA          TATTGGCAAACTAAT  87 23
 JI729_13640 2657862 .. 2657872 +    -4  -3.87627   ATCTCCTTAACCGCC                 CAAT CCT ATTG                 TCTTTTATGTACGAA  56 434
 JI729_13695 2667354 .. 2667379 + -14.1  -5.42198   TTCCCCCTTGGAGAA         GAGCAGTTAGC TTTT GCTAGCTGCTC          TTTTATTTTTTCAAA 100 196
 JI729_13710 2669548 .. 2669571 + -15.4  -4.87893   CGTACATACGAAAAA          GCTCCTTTCC AATT GGAAAGGAGC           TTTTTCATTACGCTT 100 49
 JI729_13740 2676549 .. 2676573 +  -9.4  -4.63184   ATTTACAACTAAAAA          CACCTCATTT AAGGA AAGTGAGGTG          TTTTTGAAATCACTT 100 150
 JI729_13790 2682249 .. 2682291 +  -5.2  -4.59081   GCTTAATTACAAAAA GCATTAAGAAAAATATCAT CTTATT GTGATATATT-CTTAATGC TTTTATGTGAATTTC  70 35
        exsC 2682877 .. 2682901 +  -3.6   -5.4251   TTGTACTTGAGAAAA         GCGAG-GCGTA GTTA TACGTTCTTGC          TTTTTTATATGTCCC  76 60
 JI729_13800 2684346 .. 2684385 + -14.6   -4.4648   AATTTATAAAATAAA  CAAAGAAGTATGGATCTA ATAT TGAATCCATACTTCTTTG   TTTTATAATACGCCT 100 32
 JI729_13805 2684790 .. 2684820 +  -6.3  -4.18676   TAGGCTATAGTACTA       GCATGAATCTG ACTTTACAC TAGATTCATGC       TTATTTAATTTCTCC  70 38
 JI729_13810 2685327 .. 2685346 + -10.8  -4.05026   ACATTTCAGAGGAGA            CGCAGAAA ATAT TTTCTGCG             TTATTTCACTTTAGA 100 43
 JI729_13815 2686860 .. 2686882 +   -12  -3.49048   AAATTAGTTCCCACT           CCCCTGCTTA ACT TTAGCAGGGG           TATTATTAATTGGAG  95 34
 JI729_13820 NONE
        coaW 2688216 .. 2688231 +    -9  -4.09685   GCTACGAAATAAAAA              GCTGAC TTTT GTCAGC               TTTTAAAAAATGGCA  83 29
 JI729_13865 2693111 .. 2693124 +  -3.9  -5.42198   AAGGAGGAATTCATT               TATGA CTTT TCATA                TTTTCTTTTTTACGA  76 52
 JI729_13870 2693248 .. 2693262 +  -2.2  -4.08945   CATACTACACTCAAA               TGTATT AAA AATATA               TTTTAAAGGGGTAAT  52 18
 JI729_13875 NONE
 JI729_13880 2693590 .. 2693606 +  -3.8  -2.66157   ATTACTGTAGTCACC              TGTAAT TTCTT ATTACA              CTCGTTTTTTCTAAA  44 21
 JI729_13885 2693808 .. 2693819 +    -3  -2.80876   ATTCGAAAGGAGGAA                TTCA CATA TGAA                 GTTTCACCTATTCTT  43 46
 JI729_13890 2694155 .. 2694181 + -12.4  -3.97406   TTTTTATAAACAAAA         GATACACCACTT AAA AAGAGGTGTATC         TTTCTCAGGTTTTAC 100 225
 JI729_13900 2696680 .. 2696700 +  -8.3    -5.626   ATTTACGATGAAAAC            CCGCAAG CGAATAA CTTGCGG            TTTTTTTATACCGTA  95 453
 JI729_14005 2714526 .. 2714549 +  -6.2  -6.12328   AATACAGTCAAAAAA          GGATTGAATAT ACA AT-TTCAATCC          TTTTTTTTATATTAT  95 340
 JI729_14010 2715299 .. 2715332 + -19.9   -4.0098   TGGTATATTTACAAA     TAAAAGGCGCTATTC ATAT GAATAGCGCCTTTTA      TTATTTAGCTTCCCC 100 44
 JI729_14070 2736292 .. 2736321 +  -2.1  -5.72118   TAACGTTTTAATACA       GGAGCGCC-CTT TTTAATT ATGTGGTGCTCC       TTTTTTGTATTTTTT  80 38
 JI729_14090 2738459 .. 2738499 + -14.3  -4.81359   TAATGATGTTGCGAT  TAAAAAACAAGCCTAACAT AAT ATGTTAGGCTTGTTATATA  TTTTGTATTTCAGTT 100 10
 JI729_14110 2741905 .. 2741926 +  -7.3  -5.47431   ATGTAATTCAAAAAA           TGCTTAGGA TTTC TCCGAAGCA            TTTTTTGTATGTTAC  90 97
 JI729_14120 2744969 .. 2744987 + -10.3  -5.74122   GCAGAAATAAAAAAA             CGTCCGA TATAT TCGGACG             TTTTTTTGTCTACTA 100 42
 JI729_14145 NONE
        lsrK 2752132 .. 2752142 +  -4.6  -2.88579   TCACATATGTGGATT                 GCGC CTG GTGC                 TCTGTAACACCTTAC  50 8
 JI729_14155 NONE
        lsrF 2753336 .. 2753358 + -10.7  -5.37593   GAATTAATGTGAAAA           GACAGACTA TTTAT TAGTCTGTC           TTTTTTACTTTACAG 100 34
 JI729_14180 2757087 .. 2757105 +    -6  -2.62613   AAAAGTCTTACTGCC             CGTTAATC CGA GATAAACG             ATGTTTAAAATCGCA  54 129
 JI729_14185 2758517 .. 2758561 + -11.8  -4.24002   TATGGTAAATAATTT TTATAATAAAAGACACCCAA GCCAA TTGAGTGTCTTTTATTATTA TTTTCGAATTTGCCC 100 33
        proC 2762631 .. 2762647 +  -6.7  -4.69027   TATGATTGTGTAATT              TTATTAG AAA CTAATAA              TTTTTCAATGCATTT  80 221
 JI729_14215 2766792 .. 2766824 +  -7.7  -5.73672   GCACGATACAAAAAA      GACAACACGTGGCGT TTC ACTTCATGTGTGGTC      TTTTTTTCATTATTT 100 45
 JI729_14220 2767759 .. 2767787 +  -7.6  -3.31946   TTTTGAAACAAAAAC       TCCCCTTAAATCG AAAA TGAT-TAAGGGGA        ATTTTATATACGATG  69 280
 JI729_14245 NONE
 JI729_14250 2775878 .. 2775899 + -13.1  -5.39681   AATAACAAACTAAAA           CGCTCAGAA GATA TTCTGAGCG            TTTTTATTTCCTTCT 100 105
 JI729_14285 2780430 .. 2780461 + -11.1  -4.82855   ATAAAAACATGATTA      TCCCTTGTAGAAA TAGATT TTTCTATAAGGGA       TTTTTCCGTTTAATA 100 40
 JI729_14300 NONE
 JI729_14305 NONE
 JI729_14310 2785045 .. 2785087 + -13.2  -3.46808   AACGAAAGAAATAAC GTAATAAAAAGACTCCTAT TTTTTC ATAGGAGTCTTTTTAT-AC TTCTACGTTGCTTTT 100 27
 JI729_14320 NONE
 JI729_14325 2788871 .. 2788887 +  -9.5  -5.56264   TGACCGAATAAAAAA              GATGGTT TGT AACCATC              TTTTTTGTCTTTACA 100 88
 JI729_14355 2798110 .. 2798161 +   -14  -4.00934   TTTAAATTAAAAATA TAAAGCCAACATATCCCTGTTCTA TAAT TAGAACAGGGATATGTTGAATTAG TTTAATGTTTAACAT 100 117
 JI729_14490 2825737 .. 2825755 + -10.3  -4.28375   CTTATTAAAGTAAAA             GAGGTGC AATTC GCACCTC             TTTTGCATGTATTAA  95 33
 JI729_14505 2827904 .. 2827932 + -14.8  -5.01732   GGTAGATTCATATTA        GGACTCTGTTTA AGCAA TAAACAGAGTCC        TTTTTTCACAAGATT 100 36
 JI729_14545 2833486 .. 2833512 +  -9.5  -4.88228   TTACAAAAACAAAAA         GGATCTCCTTC TATAT GAAAGAGATCC         TTTTTACTGTTAACT 100 8
 JI729_14555 2836168 .. 2836207 +  -8.7  -3.89215   GCCCGATTGGTTCAA  CTAATAATCAGTGGAGGG TGAAT CCCCCCACTGATTAA-AG  TTTCACTTTATAGGA  82 192
 JI729_14560 2837080 .. 2837116 +  -7.3  -3.79764   TTTGTCCATTAAACT    CACCTCCAAAACATTTT ATT AGTATGGTTGGGAGGTG    TTGGTTTTATGTAAT  71 433
 JI729_14610 2845338 .. 2845359 + -10.2  -5.98675   ATAACTATAAAAAAA           TACCGCTC AATTTA GAGCGGTA            TTTTTTATTTTTCTA 100 37
 JI729_14620 2847912 .. 2847935 +   -14   -5.4505   TAAAATAAAGTGAAA          CGAGCAAACA AATT TGTTTGCTCG           TTTTTTGTTGCAAAC 100 33
 JI729_14625 NONE
 JI729_14630 2849138 .. 2849179 + -20.5  -3.10597   TTTAAGTATTTTAAA CAAAACCGCTTATGCTTCA AAAA TGAAGCATAAGCGGTTTTC  CTTTTGAATACAGAA 100 36
 JI729_14645 2851786 .. 2851806 + -11.1  -4.78764   TTGTAGCTAACAAAA            AGAGGTGGC AAA GCCACCTCC            TTTTTGCTCCGTTTA 100 31
 JI729_14655 2853276 .. 2853304 +  -2.5  -3.97437   AAAGTGAAACTTTAA        TAAGTGGGG TTTTGCTCCTC TCCCACTTA        TTCTATTATTTTCAT  52 34
 JI729_14670 2856953 .. 2856970 +  -9.9  -5.13521   TACCCAAATAAAAAA             CTGAGGT GGAT ACCTCAG              TTTTTTCGATAATTT 100 50
 JI729_14730 2866363 .. 2866393 + -21.4  -3.53563   TCATACACATAAAAA       GCACGGGTTTGATT ACT AATCAAACCCGTGC       TTTCAAAACAACTAT 100 160
 JI729_14770 2874029 .. 2874054 + -14.9    -5.055   GATTTCATCAAAAAA         GCTGTTTCACT AATT AGTGAAACAGC          TTTTTTAAGCGTTCA 100 157
 JI729_14780 2876043 .. 2876079 + -16.9  -3.90291   AATTCAGCTATATAA    TAAAAGAACATCCACTA TAA TAGCGGATGTTCTTTTA    TTTCATTACAACACT 100 39
 JI729_14790 2879865 .. 2879875 +  -5.4  -3.57561   TCTTTTCTCAAATCC                 TCCA AAA TGGA                 TTTGAGAAATTAGGG  59 155
 JI729_14795 2881004 .. 2881029 +  -8.3  -4.74132   AAAGGTTGATTAAAG         TGGGTTACGCT ATAT AGCATAACCCG          TTTTTAATGAAATCT  87 240
 JI729_14800 2881555 .. 2881582 + -14.4  -5.47159   GATACATCTAAAAAA        TAAAAAAGTGGC CAAC GCCACTTTTTTA         TTTTTGTTTATTAAG 100 23
 JI729_14815 2884022 .. 2884048 +  -2.4   -5.8187   TATTCTTTATAAAAA         GGTAAGATTG CACTCCA TAATCTTATC         TTTTTTTATTACATG  80 54
 JI729_14820 2885089 .. 2885122 +    -9   -2.7169   GGATCTTTAAGATCA     TTATGGCCAACTAT TTATTC GTGGTTGGCCATAG      CTCTTTATAAAGATT  70 31
        ansR 2888700 .. 2888736 +  -6.8  -5.08178   CACTTTTGAAGAATA   CGCCATTCT-TTCTGTA GATT TATAAAAAAGAATGGCG    TTTTTGTATGTCTAT  83 340
 JI729_14905 2905967 .. 2905995 + -11.1  -3.63515   AAAGTGAAACTTTAA        TCAGTGGGGGT TTTGTTC ATCCCCACTGA        TTATTAGCCCTCACC  90 224
 JI729_14980 2925202 .. 2925236 +  -7.3  -4.36262   ATTCCTTTAGAAAAA     CCCAAATTTCTCA ATTTAATGC TGAGATATTTGGG     TTTTAATATAGGTAT  79 48
 JI729_15010 2933143 .. 2933162 +  -3.5  -4.11692   TTAAATGGCGGTATT            GCCATCC AAGACC GCATGGC             TTTTCAAGGTGAATA  57 62
 JI729_15055 2942151 .. 2942206 +   -29  -3.05769   GGGGACAATTGGAGA TAGCAAATAAATAAAAGAGCCAATTC GTAC GAGTTGGCTCTTTTATTTATTTGCTA TCTATCGTTTGGAGA 100 12
 JI729_15120 2956325 .. 2956344 +  -3.5  -5.41941   GAAAATTTGAAGAAA            CACAGAG ATAAAA CCCTGTG             TTTTTATTTGATTTA  76 15
 JI729_15150 2960617 .. 2960651 + -17.5  -3.00476   GCAACCTAAGAAAAG     CAAATACCCTAAACA TTTTT TGTTTAGGGTATTTG     TATATACTTCCAAAT 100 110
        rarD 2968764 .. 2968796 +   -13  -5.27477   GTAACGAAAATTATG     TA-AATAAGCTGCCC ATAT GGGCAGCTTATTGTA      TTTTTTGCTTAGCGT 100 72
 JI729_15235 2978851 .. 2978880 + -10.1  -5.27477   TAACGAGAATAATGT       AAATAAGCTGTCC ATGT GGGCAGCTTATTG        TTTTTTGCTTAGCGT 100 268
 JI729_15260 2985968 .. 2985985 +  -8.3  -4.47707   TTTAGGATAGAAAAG             GAGCCGG AATT CCGGCCC              TTGTTTTTAATGAAA  85 49
 JI729_15295 2993276 .. 2993305 + -10.8  -5.68438   AATGTCTATGTGAAA       CAGGACCCGATA GATGCA TATCAGGTCCTG        TTTTTTATTTAGTAG 100 84
 JI729_15310 3000137 .. 3000153 +  -3.7  -4.88326   TTATCTATCTCGTTT              GATGTTT TTA AAACAGC              TTTTGCTTTTTCTTT  69 454
 JI729_15575 NONE
 JI729_15580 3041733 .. 3041760 + -12.8  -3.35349   TTTTCACAACAAAAA        TAGGGTTCCCCT GGCC AGGAGAACCCTA         TTATACACCTTATTT 100 146
 JI729_15590 3042520 .. 3042532 +  -4.9  -3.32268   ATTATAAAAATTACA                TAATC ATA GATTA                TTATGCAAATACTTC  53 44
 JI729_15595 3043778 .. 3043807 + -13.7  -5.80817   AAGTCCATAAAAAAA       GGAAAACCGCACA TACA TGTACGGTTTTCC        TTTTTTTATATTAAC 100 39
 JI729_15610 3046352 .. 3046362 +  -5.4  -5.75342   AAAGAAGAAGAAAAA                 TCGT AAT ACGA                 TTTTTTTTACCGAGA  91 20
 JI729_15615 3047842 .. 3047863 +  -8.7  -4.48902   TAAAACGACAAAAAA           GAGGCAGTT CCGA AACAGCCTC            TTTCTTTCCATCTAT  88 181
 JI729_15640 3052794 .. 3052822 +  -6.7  -5.06414   ACATTTTAGCAGAAA        GGACATTTCTTGT AAT ACTCGGAATGTCC        TTTTTGTTGACGAGC  83 52
 JI729_15720 3071027 .. 3071053 +  -5.9  -4.87893   AAAGATTCGTATTAG         GGTGTCAATCT GATAA AGATTGATCCC         TTTTTCATTCAGGTT  77 42
 JI729_15775 3077895 .. 3077910 +  -7.6  -3.21925   TAAATAATTTATTAA              CTCTAC TGAT GTAGAG               TTAATAGTGCACTGT  69 230
 JI729_15810 NONE
 JI729_15815 3083081 .. 3083100 +  -5.1  -3.83921   AAAGAAAAGAAAAAA            GAATAGT CTTTGC ACTATTC             TTGTCTTGTCTTCCC  61 20
 JI729_15820 3083532 .. 3083552 +  -6.2  -5.16132   AAGAAAAAAATCCAA            GAGTAGTC TTTAC GATTACTC            TTTTGTTTTCCTATA  81 20
 JI729_15835 3085266 .. 3085284 + -10.3  -4.90918   TATATAACACAAACA             CCCTAGC TCTTC GCTAGGG             TTTTCTTAGTTTTAT 100 151
 JI729_16055 NONE
 JI729_16060 3117137 .. 3117170 + -14.2  -4.93454   TCCGCTTAACGTTAA     TAAGGAAAGTAAAC TTCCCC GTTTACTTTCCTTA      TTTTGTATTTCTTTC 100 32
 JI729_16065 3118983 .. 3118999 +  -3.7    -5.252   AAAAACAATAGCTCT              CAAATAC CAG GTAATTG              TTTTTTATAAGCATG  73 518
 JI729_16075 3120836 .. 3120852 +  -6.6   -5.1101   TTATTTAAACAAAAA              GCTAGT TTTAT ACTAGC              TTTTTTACATAATAA  83 33
 JI729_16100 3123244 .. 3123265 + -13.1   -5.0538   GAAAAAGATTAAAAA           CTTCCCATC AATT GATGGGAAG            TTTTTTCAAATGGCA 100 29
 JI729_16140 3132678 .. 3132702 + -15.9  -4.39426   GTAAAAATATAAGAA          GGGATTGATCA TAA TGATCAATCCC          TTTTATCAAAATATA 100 128
 JI729_16155 3135217 .. 3135258 + -15.6  -3.72395   TTCACTTACAAGAAA CAATAAAAAACAGTAGTG ATTTTA CATTACTGTTTTTTATTG  TTCATTTTCAATTGT 100 41
        hisS 3138030 .. 3138047 +  -8.4  -5.32599   TATTTATAATACGAA             CCACCC TCGTTT GGGTGG              TTTTTCTATTTTATA  93 32
 JI729_16170 3138550 .. 3138570 +  -5.5  -5.54079   TAGGTCAGCAAAAAG            GATTTACTT TTT AAGTAAACC            TTTTTTCATTTTTAA  88 79
 JI729_16175 3139323 .. 3139373 + -13.9  -4.30793   TAAAAAGTAAAAAAA TT-TAAAAATAAAAGGTGTTTTCA CGTA TGAAAACACCTTTTATTTCTACAA TTATTTCTTCTATAA 100 31
 JI729_16185 3140677 .. 3140691 +  -3.6   -3.1793   TATGTATGAATTTGG               TTTTTC ATG GAAAGA               TATGTTAGTATGTAT  47 109
 JI729_16190 3141029 .. 3141086 + -24.8   -2.7795   GCAAGAGCAAGAATA GT-ATGAATGAAAAACACGAGGGCGGAT GCAT ATCCGCCCTCGTGTTTTT-ATTCATCAC TCATTCAGTGATTTA 100 25
 JI729_16200 3142902 .. 3142944 + -15.2  -3.73587   AAGCTTTCTGGTAAG AAAGAGAAAAAAGATATGCA TCT TGCATATCTTTTTTCTCTAA TATTTTACATATATT 100 27
 JI729_16205 3143951 .. 3143970 + -12.2  -4.13014   AACAACCTAAAAAAA            GCCTACTC ACAC GAGTAGGC             TTTTGAAACTATGAA 100 60
 JI729_16235 NONE
 JI729_16240 3149273 .. 3149304 + -15.4  -4.10934   AATCACATAAAAAAA      TACCGTCATTCTTT CCAA GAAGAATGACGGTA       TTTCTCATTGATTAT 100 62
 JI729_16270 NONE
 JI729_16275 3155989 .. 3155999 +  -2.6  -4.45077   GAATCTGTTTTGATT                 TTAA ATA TTAA                 TTTTCGTAGTTTTTC  60 359
 JI729_16285 3158204 .. 3158233 + -13.8  -5.09173   ATTGTTAATAAAAAA       GAGCTAAAACAG ATAATA CTGTTTTAGCTC        TTTTTTCACGTATTC 100 19
 JI729_16300 NONE
 JI729_16305 3160792 .. 3160824 + -12.1  -5.57729   TTTAATATTAAAAAA      CACAAGGTGTGTCTT ACA AAGGCATTCCTTGTG      TTTTTTATATTCTTT 100 53
 JI729_16330 3168656 .. 3168681 + -10.5  -5.66229   GTCTATAATAAAAAA         TTCGACCGTCA TATG TGACAGTCGAA          TTTTTTATTCTTCAT 100 76
 JI729_16340 NONE
 JI729_16345 3170621 .. 3170652 +    -6  -4.35926   TTTTTCATAAAAAAA      GAGAGAAATCTA CATCAAAA TAGATTCCTCTC       TTTTACATTTGGACT  70 65
 JI729_16370 NONE
        rfbF NONE
        rfbG NONE
 JI729_16385 NONE
 JI729_16390 NONE
 JI729_16405 3181170 .. 3181196 +   -16   -3.4691   AAAAGAAATAAAAAG         CAGGCAGAGATT TTT AGTCTCTGCCTG         TTCGTATTATTGGAT 100 30
 JI729_16420 3182927 .. 3182964 + -21.7  -4.46155   AGGCCGAAAAAGAAA   CAATAAAAAGCAAAGCG ATAT CGCTTTGCTTTTTATTG    TTTTCTGAGTATATG 100 20
 JI729_16465 3195285 .. 3195307 +  -9.2  -4.88067   TAACATTCAAAAAAA           CCTTGCAGAA AAA TTCTACAAGG           TTTTTGTCCATAAAT 100 223
 JI729_16500 3205228 .. 3205246 +  -8.9  -4.74103   TAAGAAATAAAGCAA             GGTGATC AAAAC GATCACC             TTTTTCCCTTACAGA  91 154
 JI729_16560 3215628 .. 3215652 +    -8  -5.84381   ACAAGAAATAAAAAA         TACTACC-TCC AAAT GGAAGGTAGTA          TTTTTTTATTAATCA 100 153
 JI729_16590 3221079 .. 3221105 + -10.2  -5.47159   TATTGAACAGATAAT         GAAAGTCCGG ATGTATG CCGGGCTTTC         TTTTTTATATTGAAA 100 27
 JI729_16620 3225967 .. 3226003 +  -3.9  -3.86397   CTTAAAAATAAAAAA   CGCTATTC-TCTCTGT AAAATC ATAGAAAAGAATAGCG    CTTTTTATTTTGAAA  54 404
 JI729_16685 3238741 .. 3238760 +  -7.8  -4.46155   TGATAAATAATAAAA            GCACGGAA AATC TCCCGTGC             TTTTCTAAATATATA  82 123
 JI729_16730 3246082 .. 3246101 +  -6.4  -5.43621   GGTGCATTGAAAAAA            GATCAACC AAAT GGATGATC             TTTTTTATAATTTAT  86 31
 JI729_16740 3246747 .. 3246775 +  -6.1  -3.02109   TCCTTATAATGAAAA        TAAAGAAGCAG TTCCTTC CAGCTTCTTTA        TCTATATAACATTTT  59 32
 JI729_16765 NONE
 JI729_16770 NONE
 JI729_16775 3251558 .. 3251581 +  -6.8  -4.65838   TATTTAAATGAAAAA          GTCATGAG CACGCGAA CTCATGAC           TTTTTGCACTATATA  78 34
 JI729_16800 3256888 .. 3256910 + -12.1  -4.58424   TCTCATTTACATAAA           GAAAGAGGG AGTTC CCCTCTTTC           TTTTATATCGTCCTA 100 43
 JI729_16815 3259295 .. 3259316 + -10.1  -4.60797   TCTTCAATAAAAAAA           GCGCCATCA CAAG TGACGGCGC            TTTTCTATGTAAGAG 100 76
 JI729_16830 3262010 .. 3262035 + -16.3  -5.14563   TCGTCAAATACAAAA         GGTTTGCAGCA TCCG TGCTGCAAACC          TTTTTTCATCACCAA 100 64
 JI729_16860 3267183 .. 3267210 +  -9.9  -5.56568   ATGTAAAAACAGTTA        GCCCATCAATC ATTAGA GAGTGATGGGC         TTTTTTTAGTAATAT 100 49
 JI729_16875 3269664 .. 3269692 + -10.5  -3.10474   CTGAATGCAAATCGA        GCATGTTTTGA AATCCAA TCAAAACATGC        TCTTAAAATATTCTA  81 73
 JI729_16895 3273029 .. 3273067 +  -8.5  -5.19879   CCATAATCGTTCCAA  TAA-AAAAGGAAGCTAGA TTTC TCTACCTTCCTTTTCTTA   TTTTTATATTTCCAC  93 35
 JI729_16925 3280554 .. 3280574 +  -8.3   -4.4267   ACTATAAGTAAGTAA            GCCTTGTTA TTT TAGCAGGGC            TTTTCAATTTTCAGC  85 34
        pepF 3282454 .. 3282479 + -16.3  -5.33026   TCAACATTATAAAAA         GCATGCAGAGT ATAT ACTCTGCATGC          TTTTTATTTGAATTA 100 29
 JI729_16965 3289302 .. 3289322 +  -5.5  -4.48987   GGCAATGAACGAAAT            TGAAAATGA ATC TCATTTACA            TTTTGATTATACAAC  71 23
 JI729_16975 NONE
 JI729_16980 3292088 .. 3292114 +  -8.1  -4.85195   GAGTTAGATTAAAAA         GGGTATACC TAAAACACT GGTATACCC         TTTTTCACTTATTTT  90 29
 JI729_16995 NONE
 JI729_17000 3296958 .. 3296992 + -14.6  -2.95787   AAAATTAAATAATAA     TAAAAACCTCCATTTT CTT AAAATGGAGGTTTTAA     ATTTGCTGTTAAATA 100 29
 JI729_17005 3298623 .. 3298655 + -12.1  -4.96848   GTTTAATATGTAAAA      AGGTGCGTTCATATA AAT TGTGTGAACGCACCC      TTTTTATATCCCCCC 100 43
 JI729_17010 NONE
 JI729_17015 3300173 .. 3300192 +  -7.9  -4.67011   CTTTAAAAAACGGAA            GACCTTC AATTAA GAAGGTC             TTTTTAAATACGCTT  83 35
 JI729_17050 3305535 .. 3305574 + -18.2  -4.43571   TTTGGGTATAACGCA  TAGTAAAGAAGGTCGC CGTGAATC GCGACCTTCTTTACTA   TTTTACTGATTTTGT 100 23
 JI729_17055 3306199 .. 3306215 +  -6.5  -3.07622   AAAAATTTTCATTTG              CGCACCA AAA TGTTGCG              TTAAGTAAAATGTAT  60 305
        pssA 3307475 .. 3307510 + -13.4  -4.37348   ACGTCAGTCCACTTT    TAACAGGAGCTCCCTT TATC AAGAGAGCTCCTGTTC     TTATTTCTTCTTCTT 100 202
 JI729_17080 3312002 .. 3312022 +  -8.3  -5.24449   TTAGTTCTATCACTA            GAGCACC TTTATGC GGTGCTC            TTTTTTGAATTTATA  93 196
 JI729_17085 NONE
 JI729_17090 3315354 .. 3315367 +  -2.5  -2.68607   AGACTGATACTTTCC               TTATT TAAA AATAA                ATCTATTTATTTCAG  40 40
 JI729_17095 NONE
        rfbG 3317527 .. 3317547 +  -2.5   -3.8186   ACCCATACTTGCTGT            GAGTTCCTT ATG GAGGGAGTC            TTCTTGGTTAAAATA  50 54
 JI729_17110 NONE
 JI729_17115 3321305 .. 3321338 + -14.1  -2.63555   ATTTAATGTAAATGT     ATTTAAAAACCCTCC AAAT GGAGGGTTTTTAAAA      TGGCTTATCTGCCTG 100 35
 JI729_17130 3325646 .. 3325662 +  -6.6  -5.38321   TATTTTCAAAAAAAA              GACACT CTTGT AGTGTC              TTTTTTATAGTATTT  89 216
 JI729_17140 3327010 .. 3327035 +  -9.9  -5.19261   TATACAATTAAAAAA         GTGAGCAATAT AGTT ATATTGTTCAC          TTTTTTGATACATTT 100 157
 JI729_17225 3387486 .. 3387520 + -10.2  -3.69323   GAATTGATAAAAAAA     GCCTAATTTCTCTA CAATACA TTGAGAAATTAGGC     TTTAAATAGTAATAA  85 104
 JI729_17235 3388391 .. 3388424 + -10.6  -5.56112   CTAAAATGATAAAAA     TAAGCACATCTTGTT ATAAA AACA-GATGTGCTTA     TTTTTTAGTTTTTAT 100 59
 JI729_17245 3392721 .. 3392738 +  -4.8  -5.19879   AATAATTACTAAAAA             CCACTC ATATAA GGGTGG              TTTTTCTATTTCCCC  77 104
 JI729_17255 3395453 .. 3395492 +  -9.4  -4.14598   AATTAAATATAATAA  GGATCAGAGCCTATCTAT TGTT ACAGATACACTCTGATCC   TTTAGTTTAATTCAA  88 137
 JI729_17270 3400337 .. 3400370 +   -17  -4.17425   ATGAATGATCACAAA     TAAGCGAGAAAGTG ATTATA CACTTTCTCGCTTA      TTTTACACTGCTTCT 100 37
 JI729_17285 3403199 .. 3403227 + -19.1  -2.52543   AAAAAATAAAAATTA        TATAAGGAAGGGG CTC CCCCTTCCTTATA        TAAATTGACGAAAGT 100 44
 JI729_17290 3404491 .. 3404511 +    -9  -5.10033   ATAACTGTTGTTACT            GGGCGCTT TTAAT AAGCGCTC            TTTTATTTATATTAA 100 129
 JI729_17335 3410680 .. 3410727 + -17.4  -5.85425   AAAGAATCTACATGA TCAATACAGAAAGAGCATCC TTTTTTCC GGATGCTCTTTCTGTATTTA TTTTTTATTTATTTG 100 26
 JI729_17345 3419058 .. 3419102 + -14.5  -3.49951   GTTATTAGAATTGAT GAATAACAAAAAGGCGTGCTA TTT TAACACGCCTTTTTGTTCTAC TTCTCTAAAAATATA 100 20
        dhaS 3427362 .. 3427405 + -17.9   -3.2313   TGGCTTAACTTAAAT TAATGAGAAAGAACCTGACC TATCC GGTCAGGTTCTTT-TCATTA TGTATTCCTTTAAAC 100 23
 JI729_17390 3428636 .. 3428671 +   -15  -3.77789   GGACCTACTACCCAA    CAAAATAAACCGAGAG ACAT CTCTCGGTTTATTTTC     TATATTTTTTTGCAT 100 71
 JI729_17480 NONE
 JI729_17485 NONE
 JI729_17490 3448230 .. 3448266 + -12.5  -3.45941   TAAATAGAAAAAACA    CGCTACTTGCTCT CATACGCCTAA AGAGCAAGTAGCG    TATTATCATTTTTAT 100 34
 JI729_17520 3455574 .. 3455597 +   -14  -5.63012   ATTTAACATAGTAAA          GAGTTGGCTA CCTT TAGCCAACTC           TTTTTCTTTATTTTT 100 35
 JI729_17575 3469315 .. 3469343 + -11.9  -4.38712   CTGTTCCACAAAAAT        AAAAAAGACACGA ATT TCGTGTCTTTTTA        TTTTATAGAAATGAC 100 24
        plsY NONE
 JI729_17625 3481576 .. 3481593 +  -6.9  -6.07374   ATGAAAAATAAAAAA             ACGTGGC TTCT GCCACGC              TTTTTTATTTTTTCT  95 30
 JI729_17635 3483406 .. 3483442 + -16.2   -2.6336   TGAAAACTTTACGAT   TACGAAAAAGGGCTGAC AAAA GTCAGCCCTTTTT-GTA    CATTTTGTTAAGATT 100 10
 JI729_17665 3486347 .. 3486367 +  -8.3   -4.2008   ATGACACTGAATAAA            GATTAGAGC ATT GCTCTTATC            TTTATTCACATCTCT  81 27
        sspO 3491309 .. 3491336 +   -10  -5.38321   ATCAGTAACGAAAAA        TCCCAAAAGG TTCATTTT CCTTTTGGGA         TTTTTTCTAATGTTT 100 33
 JI729_17695 3492600 .. 3492614 +  -4.3  -2.87132   TTCACGCCAAAAACA               TCATG CACAT CATGA               TATGTAAAACAAAAG  47 4
 JI729_17700 3493145 .. 3493174 + -19.5  -3.63694   TTAATATAATACAAA       CATAAGCCCCAGT TGGT ACTGGGGCTTATG        TTATTCCGCATGCAT 100 44
 JI729_17715 3496236 .. 3496264 + -11.1  -2.54325   GTGTAAAACATGTTT        ATGAAGGATAGCT AAC GGCTATCCTTCAA        CTATATTTACAGGCC  82 35
 JI729_17725 NONE
 JI729_17735 3498436 .. 3498451 +  -5.4  -4.42806   GCAAGCAACAACTTT              TGAGGC GAAT GCTTCA               TTTATTTCAAAATAA  70 360
 JI729_17775 NONE
 JI729_17780 3506443 .. 3506456 +  -8.1  -5.96894   AAGAAAAATAAAAAA               GAGCC CATC GGCTC                TTTTTTTATTTCCCT 100 30
 JI729_17800 3508953 .. 3508984 + -14.7  -4.21275   CTTTTCAGAAGAAGT      TAAAGACTAGGTG GGAATA CACCTAGTCTTTA       TTTTGCATAAATTCA 100 23
        kinA 3511125 .. 3511155 +   -20  -5.07053   GTCTTAAATAAAAAA       GAAGCATCTGCTAA TCG TTAGCAGATGCTTC       TTTTTTAAAATACTT 100 34
 JI729_17870 3526053 .. 3526068 +    -9  -4.19879   GTCAAAAAGAAAAAA              GCTAGC ATTT GCTAGC               TTTTACACGTTTTCT  84 21
 JI729_17885 3527770 .. 3527806 + -10.9  -4.07868   CTATACTTCGTTTAA    ACTATAACGCTTGGTCA AAA TGACCAAGCGTTCTTGC    TTTCTATGAATCTCA 100 26
 JI729_17890 3528320 .. 3528340 +  -8.4  -5.15969   CCCTCATGAAAAAAA            GATTGCTA ACTTA TAGCAATC            TTTTTTAACTTACAG  93 32
 JI729_17905 3538384 .. 3538404 + -11.2  -5.33405   CACTATAAATAAAAA            GACAGCGT CAAAA ACGCTGTC            TTTTTATTTGGTACA 100 41
 JI729_17920 3541188 .. 3541215 + -13.6  -4.97957   ATACGGGATAAACGA        GAGAGGATTTTC ATTT GAGAATCCTCTC         TTTTATTGTTGTATA 100 82
 JI729_17925 3542414 .. 3542463 + -13.8  -3.19192   CTTAAACAATTCTCA TAAAAAAAGCCGTTCAAAGTGC ATCTCA GCACCCTGAACGGCTTTTCTTA TTAAGTTAAATCACG 100 23
 JI729_17945 3545741 .. 3545784 + -27.2  -3.55071   GAGCTAAAAAAAGAA CAATAAAGCGGAAATGCAAC TTAA GTTGCATTTCCGCTTTATTG TTTAACAAGGTGTAC 100 20
 JI729_17955 NONE
 JI729_17960 3547930 .. 3547963 + -17.1  -3.10493   TTGTCTTGGATACAT     TAAAGAAGCAAGTAT TTAC ATACTTGCTTCTTTA      TCTATATATTGGCAC 100 23
 JI729_17970 3548696 .. 3548716 + -11.2  -3.83998   TCGAACAAAAAGAAA            GCTGACCA TAAAT TGGTCAGC            TTTCATATCCGATCA  95 21
 JI729_18045 3565191 .. 3565217 + -12.4  -3.13033   CGATTTTTACAAATA         AAAAAGATGGGC TTC GCCCATCTTTTA         ATTTAATTTTGCATT 100 41
        lexA 3566932 .. 3566969 + -14.5  -5.63645   AAAAAATAATAAAAA   GAAGATAATTACCTTAT TTAT ATACGGTAATTATCTTC    TTTTTTGTATTTTGA 100 39
 JI729_18125 3575733 .. 3575756 +  -9.6  -5.63517   AGTTCACTTAAAAAA          GCCCTGATAC CGTA GTATCAAGGC           TTTTTTATTTCACAA 100 158
 JI729_18150 3581159 .. 3581181 + -10.7  -5.54907   TAAATAGCAATCTAA           CCTCTTTAC ATATC GTAAAGAGG           TTTTTCTTTTCTAAC 100 34
 JI729_18155 3581409 .. 3581434 + -13.4  -2.74192   TTATACACAAAAATC         GACGCACAGT TTATGT ACTGTGCGTC          TCCTCTTCGAGCATC 100 47
 JI729_18165 3583433 .. 3583467 + -20.4  -5.63517   TCAATACGCAGAAAA     TAGAAAAAACGCCTTA TTG TAAGGCGTTTTTTCTA     TTTTTTCTTTAAACA 100 4
 JI729_18170 3586825 .. 3586842 + -11.3   -5.9218   TGACAAATAAAAAAA             GAGCGAG AAAA CTCGCTC              TTTTTTTGTTATGTA 100 61
 JI729_18185 3588900 .. 3588915 +  -3.2  -5.45802   CAGTAGATTTTGCAA              CTGGTT TTGC AGCCGG               TTTTTCTTTTACCAC  79 429
 JI729_18230 3598974 .. 3599006 +  -6.4  -5.72622   CATATAGGATAAAAA     CAGCAATAGGTTCCT TTAT AGGT-CCTATTGTTG      TTTTTTATTTATGAA  95 90
 JI729_18240 NONE
 JI729_18245 3601431 .. 3601456 + -13.5  -5.52986   TAAAATAATGAAAAA         TATCCTTCTCA TTTA TGAGAAGGATA          TTTTTTTCATAACAT 100 33
 JI729_18305 NONE
 JI729_18310 NONE
 JI729_18315 3614031 .. 3614062 +  -8.8  -5.10029   AGTACTATATTAAAA      AAACCAAGTAGCAC ATTC GTACTACTTGGTTC       TTTTTTAAGCTTGCT 100 28
 JI729_18325 3616153 .. 3616198 + -22.3   -4.9725   ACAGCTTAATAAAAA CAGAAACACCCTATTTACG ACTCTCAC CGTAAATAGGGTGTTTCTG TTTTTATCTCGCAAT 100 44
 JI729_18345 3621570 .. 3621609 + -21.2  -3.93009   GAATTGGAACAAATA  TAGTAAAAAGGAAAGAAG ATAC CTTCTTTCCTTTTTACTA   TTTACATTTCTATTA 100 69
 JI729_18370 NONE
 JI729_18375 3626834 .. 3626851 +    -7  -3.63991   GGATAAAAAAATAAA             GAGACC ATTATA GGTCTC              TTCTTAAGCATACTC  67 27
 JI729_18425 3636873 .. 3636897 +  -7.2  -5.76633   ATTTAAAATCATTAA          CAGACCTCTT CACTT AAAAGGTCTG          TTTTTTTCTATGTAA  95 42
 JI729_18430 3638624 .. 3638661 +    -5  -4.13728   ACTGTATATTTAAAA   CGATTGGCATTCAATT CTAATA AATTGAATGTCAACAG    TTTTAAAAGTCTCTA  64 190
 JI729_18435 3640891 .. 3640926 + -13.5  -4.30987   AAATAATCTATATAT    GAAAAAGGAGCAACT TATTAC AGTTGCTCCTTTTAC     TTTCTTATAACACAT 100 35
 JI729_18445 3644668 .. 3644718 + -16.5  -3.12142   GTTTAACTATTAAAT CTACATATTAAAAGGGAGCAACA GTAAA TGTTGCTCCCTTTTGAAATGTAA TCTATTCACTCTACA 100 242
 JI729_18620 NONE
 JI729_18625 3687063 .. 3687088 + -11.9  -4.46404   GTTGCAATTAACAAA         GCCGACTCATA TCAA TTTGAGTCGGC          TTTTACTATTACTTC 100 144
 JI729_18635 3688470 .. 3688486 +  -3.7  -3.56821   GATGAAATCCCTCTT              GAAATAG AAA CTATTAC              TTTACGAAATCTAAT  52 464
 JI729_18645 3689066 .. 3689076 +  -3.2  -2.62038   TAAAGAGAAAATATC                 CCGT TAT ATGG                 CTTGCTAATTTTGCG  42 89
 JI729_18650 3689705 .. 3689718 +  -3.9  -2.71139   CTTTTAGAAAAAATA               TAAAG GAAT CTTTA                TGAGTTGTGTTTTCC  44 159
 JI729_18660 3691595 .. 3691611 +    -8  -5.81622   TATTAGCTGATGAAA              GACCCT CTTGT AGGGTC              TTTTTTTGATTTTAT 100 41
 JI729_18705 3699831 .. 3699843 +  -4.8  -2.82602   TTTATGCTTTGTCGT                CACC TTGTT GGTG                TAATTAGATTTACTC  50 44
        rpmB 3759280 .. 3759293 +  -8.1  -5.58454   TAATAATAAAAAAAA               GAGCC GATA GGCTC                TTTTTTTACTATAAC  95 38
 JI729_19080 3779106 .. 3779127 + -13.1  -5.82172   GCGTAAATAAAAAAA           TGCGTTGCT TATA AGCAACGCA            TTTTTTTATATTCGT 100 35
 JI729_19090 3781721 .. 3781740 +  -9.3  -4.33854   AATCATAGAAAAAAA            TGCCACC GAATAA GGTGGCA             TTTCCTTTTATTCAT  89 41
 JI729_19100 3783690 .. 3783715 +   -12  -5.32944   ATGTTTATCCTATAA         CGTAAGCAAG TGTTCT CTTGCTTACG          TTTTTTGCTTGTAAA 100 26
 JI729_19105 3784185 .. 3784210 + -10.4  -5.27779   ACAATGATATAAAAA         AACGACCGCG TTCCCC CGCGGTCGTC          TTTTTTCGTGTTACG 100 99
 JI729_19305 3828645 .. 3828696 + -24.4  -3.56558   ACAAACGAAGAATCG GCTTAAGAAATAAAAAAACAGCTGT ATA ACAGCTG-TTTTTTATTTCTTAAGC TTCTCTAACTTCTCA 100 20
 JI729_19325 3831455 .. 3831473 +  -8.9  -5.32944   AATTCCTATAAAAAA             CCTCTCT ATTTC AGAGAGG             TTTTTTCCTTATCCA 100 30
        ylbJ 3834610 .. 3834629 +  -9.3   -3.6834   ACATATAAAGAAAAA            CCCCGTT CACTTT AACGGGG             TTTGAAACTTTTCTT  81 11
 JI729_19355 3836580 .. 3836603 +   -11  -5.48063   ATTTCAAGTGAAAAA          TCCCCGGCTA AATT TAGCAGGGGA           TTTTTTCTATTAGCT 100 47
 JI729_19390 3840709 .. 3840743 + -17.4  -3.76952   AAATTATTGATTAAC     AAAAACAAGCGCATCA ATA TGATGCGCTTGTTTTA     TTTCCCTTCCCTAAG 100 27
        ctaA 3849341 .. 3849363 + -13.5   -5.0538   AATTTAAAACTAAAA           TCCCTTGCC AATTC GGCAAGGGA           TTTTTTGCAATAAAA 100 39
 JI729_19450 3855431 .. 3855452 + -14.5  -4.62783   ATTATTTAAAGAAAA           GGAGTGAGC TTAA GCTCACTCC            TTTTTACAATAAATC 100 32
 JI729_19465 3857829 .. 3857882 +   -13  -2.73721   AATCGAAGATGATTG GTAAAATGTAAATAAGTCCTTA-CT CATAT AGATAAGGACTTATTTATATTTTTC TGGTTCACGATTCAT 100 22
 JI729_19485 3860793 .. 3860819 +  -5.2  -5.85737   CAATAACGCTAAAAA         GTAAGAAGCT TATACAC AGCCTCTTAC         TTTTTTTGTTGCTCT  91 35
 JI729_19500 3862737 .. 3862756 + -10.8  -5.01845   ATCGATAGTAGAAAA            CGGACAAT TTAT ATTGTCCG             TTTTTAGTTGTTATC 100 33
        speA 3864908 .. 3864925 +  -9.9  -6.10489   TATTAAAGAGTACAA             GCCTATC AGTT GATAGGC              TTTTTTTTTCACCTT 100 13
 JI729_19515 3865832 .. 3865851 + -13.6   -5.3798   CAATTTATTAAAAAA            GCGCCTAC ACAT GTAGGCGC             TTTTTCTTATTATTA 100 30
 JI729_19540 3867783 .. 3867813 + -15.6  -3.81027   TGATGAAAATAAAAA       TAGCCCCTCTCTTA CAA TAAGAGAAGGGCTA       TTTACATTACTTAAA 100 441
 JI729_19570 3873410 .. 3873440 + -15.6  -3.89822   CGAAACAACTATGGA       AAGAAAAAGACGGC TTT GCCGTCTTTTTCTG       TTTATCACATACATA 100 48
 JI729_19575 3874115 .. 3874147 + -19.4  -3.33969   CTAGAGCGATAATAA      TAAAGAGGCGGAAG TTAAT CTTCCGCCTCTTTA      TTATGAAATGGGTTC 100 29
 JI729_19585 NONE
 JI729_19590 3877375 .. 3877418 + -17.9  -3.04515   ATCATTATGGAAATA TAAGA-AAAAGGACAATGCC ATGAA GGCATTGTCCTTTTCTCTTA TCTTAAAAAGTGTTT 100 23
 JI729_19645 3884939 .. 3884970 + -17.6  -3.34029   CAACTACTCAATATA      GAATAGGAATAGGT AAAT ACCTATTCCTATTC       TTATCCCGCTATTTG 100 20
 JI729_19665 NONE
 JI729_19670 3889529 .. 3889548 +  -9.4  -5.25735   AGAAAAAAGTAAAAA            CCTCTTAT TGAC ATAAGAGG             TTTTTACTTTTTTCA 100 151
 JI729_19685 3893953 .. 3893989 + -18.3  -5.57729   ACTTATACAAAAAAA    TAAAACAGTTTGGCCAA GTG TAGGCCAAACTGTTTTA    TTTTTTCTCTTCTTT 100 23
 JI729_19700 3896319 .. 3896339 +  -8.3  -4.98255   ACCTTCACTAAAAAA            GGAACCTTT TGT ACAGGTTCC            TTTTTATCATTGACG  90 30
 JI729_19710 3898814 .. 3898845 + -11.1  -4.05389   AATATAAAAAAGAAG      CGGCATATTCCTTT ATGAA AAAGGA-TATGCCG      TTTATAATATGTATA 100 39
 JI729_19715 3899576 .. 3899629 + -16.6  -4.95758   AAAGTTGCTATAGAT GA-AAATTGAGCTATGAAAGAAG ACATCCCTA CTTCTTTCATAGCTCAATTTCTC TTTTTATACTGTACT 100 17
        metE 3902392 .. 3902419 + -12.9  -5.72254   AACGCATAACAAAAA        TGGGTTATCCT TTTCTC AGGATAACCCA         TTTTTTATTCTTTAC 100 32
 JI729_19735 3904278 .. 3904296 +  -4.6  -4.85618   AATATAAAATAAAAA             GTTACC TTCCATC GGTAAC             TTTTATTCCTTATTT  72 43
 JI729_19745 3906088 .. 3906102 +   -10   -5.9362   TACGGATATTAAAAA               GTCGCT TAT AGCGAC               TTTTTTTCTCTTTTC 100 29
 JI729_19750 3907359 .. 3907379 + -12.7  -5.64274   TTTCTAATAAAAAAA            GCTAAGAGT TAA ACTCTTAGC            TTTTTTTATGCATAA 100 14
 JI729_19775 3914251 .. 3914281 + -11.3  -5.38549   TGGTAATCCAAAAAA       GCCTTATGCCA AGTTTGAAA TGGCATAAGGC       TTTTTCTTATTTCAA 100 35
        ugpC 3917360 .. 3917382 +  -6.9  -4.59414   TACACATACAAAAAA           CCGTCCACA TATAT TGAGGGCGG           TTTTCATTATTATAC  78 58
 JI729_19805 3919231 .. 3919259 +    -9   -4.7033   AAAGAAATAAAAAAA        CAGTCAGCAT AATATTTGA ATGCTGACTG        TTTTGTCTTACATTA  91 14
 JI729_19820 3921747 .. 3921766 + -12.2  -5.33785   TGAATCGTAAAAAAA            GAAGCAGC AATA GCTGCTTC             TTTTTTATAGTGCTT 100 31
 JI729_19840 3924728 .. 3924747 +  -6.5  -3.54638   TTACAAAGAAAAAAA            CAGTAAC CCTCAT GTTACTG             TTTAAAAAAACTTAT  64 20
 JI729_19860 3927882 .. 3927910 + -13.4  -5.24129   ACCGCTCAATAAAAA        TAAAGTTTGCTC AAGAA GAGCAAACTTTA        TTTTTTATCCCGAGG 100 29
 JI729_19885 3932923 .. 3932941 +    -6  -5.96894   CTGGTTGTAAAAAAA             CCTCTC CTTAGCT GAGAGG             TTTTTTTATTTAACT  93 212
        mtnW NONE
 JI729_19895 NONE
 JI729_19900 NONE
 JI729_19905 3936076 .. 3936106 + -14.2  -5.72053   ACATCCTCCTATGGA       ACAGGCTTATTTCA TTT TGAAATAAGCCTGA       TTTTTTATTTACTTG 100 105
 JI729_19910 3936583 .. 3936618 + -13.6  -4.31835   ATTAAAGATGACTAA    ATAAATAAAAGTCCTC ATTT GAGGACTTTTATTTAC     TTTCTTCTAGAAATT 100 49
 JI729_19935 3941288 .. 3941343 +   -13  -2.51936   GCAAGTGAGTGAGTG GGCAAAATAATAAAAAACGAAGGTAAC TAC GTTGCCTTCGTTTTTTATT-TCCTGTC ATACTTTTGTAATAT 100 16
 JI729_19940 NONE
 JI729_19945 3942369 .. 3942396 + -13.6  -5.87996   TTCTCATAGAAAAAA        CCTGAGACCGATT TCA AATCGG-CTCAGG        TTTTTTTATTGATTA 100 83
 JI729_19970 3948725 .. 3948755 + -12.1   -5.5454   TGCTCATAATAAAAA      TACGACTCATTCCT TATA AGGA-TGAGTCGTA       TTTTTATTTCTTTAC 100 7
 JI729_20005 3954347 .. 3954396 + -21.9  -4.08974   GCTTGCTTCTGCTAA TATGAACAAT-AACGGCTAGGGGG AAA CCTCCTAGTCGTTTATTGTTCATA TTTCTATGATACACT 100 26
 JI729_20010 3954955 .. 3954982 +  -9.4  -3.57119   ATTACAAAAAAGAAA        GCAGAGATAA-TA AAC TACTTATCTCTGC        TTTCACGAATGTATA  81 16
 JI729_20025 3957310 .. 3957332 + -13.4    -5.252   TATTCAAGTAAAAAA           GAAGCCCGCC AAT GACGGGCTTC           TTTTTTATACAAGTA 100 30
 JI729_20100 NONE
 JI729_20105 NONE
 JI729_20110 3970608 .. 3970627 +  -7.9  -5.27206   GAACTAAATAAAAAG            GCATTGC ACAAGA GCAATGC             TTTTTATTATATATG  90 166
 JI729_20125 3972572 .. 3972596 +    -3   -3.2963   AACGAATTCTCTTTA          CAAGTAAA CGTTATCAT TTTACTTG          TTGTAAAAACATGAT  47 39
 JI729_20130 3973988 .. 3974007 + -13.6  -5.63103   TATTGGTTAAAAAAA            CACCGAGG AAAT CCTCGGTG             TTTTTTTACTTAAAC 100 31
 JI729_20180 3982728 .. 3982754 + -13.8  -5.01535   GCAAAAATCAATTAA         AAAACACTCGCC TTT GGCGAGTGTTTA         TTTTTGTAGTTGTAA 100 26
 JI729_20190 NONE
 JI729_20195 3984534 .. 3984560 +  -8.8  -5.26918   TACCGATAAATAGAA         GATTGTCTCC AGTATTA GGAGACAGTC         TTTTTTATAACGTAT 100 52
 JI729_20215 3988258 .. 3988289 +  -3.8  -5.02357   TATACATCATAAAAA      GGATACT-CGTTCTT CCA ATGAACATAGTATCC      TTTTCTTTAGTTATC  70 113
 JI729_20225 3989945 .. 3989985 +  -2.9  -3.02511   TATAATAATATGTCG CAAGTATGTAT-AAACAT AGCAAA ATGTTTCATATTTACTTG  TCTTAACAGAATAAA  42 78
 JI729_20230 3991347 .. 3991365 + -10.3  -4.81523   ATTACATTATAAAAA             GGTGCGT ATAAA ACGCACC             TTTTACTTTTTCATT 100 29
 JI729_20245 3993809 .. 3993826 +  -9.9  -5.46657   GAAAGAAACAAAAAA             CAGGCTT GCAT AAGCCTG              TTTTTTATTGCGCTA 100 13
 JI729_20255 3994583 .. 3994604 +  -8.8  -5.93252   TAATTTTACATGTGA           CATGCACA TTTTTT TGTGCATG            TTTTTTCTTTTTAGC 100 38
        ribD NONE
        ribE NONE
       ribBA NONE
        ribH 3998635 .. 3998660 +  -9.1  -5.16472   AAACAATGGGCATAA         AAAAAAGAGGC TGCG GCCTCTTTTTA          TTTTTTCACCTTTTT 100 26
        nhaC 4007449 .. 4007469 + -12.7  -5.26155   ATAATATAACAAAAA            GGATTACCA AAT TGGTAATCC            TTTTTATATTTCTCT 100 37
 JI729_20330 NONE
 JI729_20335 4011503 .. 4011532 + -16.7   -2.8076   TTGAAAACAAACGTA       TAAAGCTGCTTCT AAAT AGAAGCAGCTTTA        TGATTCGTAATAGTT 100 23
 JI729_20375 4018090 .. 4018117 + -15.8  -5.30155   GAAAACAATAAAAAA        TAGGAGATTTCC ATGT GGAAATCTCCTA         TTTTTTACTTAATGA 100 30
        proI 4020883 .. 4020906 + -11.8  -5.04175   AGAAAAATAGAAAAA          GGAGCTCAAG TTTA TTTGAGCTCC           TTTTTCTATAATTAC 100 31
 JI729_20415 4024734 .. 4024763 + -15.3  -4.17537   TCTCGTAATCTATAA       TAAAAAAGCACTG GTTA CAGTGCTTTTTTA        TTTATACTTATTTAA 100 33
        mgtA 4028680 .. 4028700 +    -9  -3.29144   TTGTAAAAATAAGAA            TGAGTGGG TATTC CCCGCTCA            TTCTAAAAGACATAA  74 35
 JI729_20430 4028887 .. 4028916 +    -8  -3.36803   CTGTATAATAGGAAA       GGTGTCATGA TTTTACTACT TCATGACACC        TTCTACATAAACTTA  69 16
      prli42 4032775 .. 4032802 + -15.8  -4.52589   TTACACATAACAAAA        TAAACCATCTCG ACAT CGAGATGGTTTA         TTTTATATAAAACAC 100 73
 JI729_20550 4051830 .. 4051852 +  -9.9   -5.7946   TTATAAATAAAAAAA           TGAGACCGT TACAC GCGGTCTCA           TTTTTTTATTGGCAA 100 55
 JI729_20560 4052780 .. 4052796 +  -8.7  -5.47964   ACGAAGAATAATACA              GTCCTGT TTT GCAGGAC              TTTTTATTATTTTCT 100 30
 JI729_20640 4069007 .. 4069024 +  -6.3  -5.36441   ACGAAATAGAAAAAA             GCTATCG AAAA TGATAGC              TTTTTTCTATACACA  86 12
 JI729_20690 NONE
 JI729_20695 4075719 .. 4075742 + -15.4  -5.21709   ATTTCCTATAAAAAA          GCACTCGTGA ATTA TCACGAGTGC           TTTTTTACTATGCAC 100 30
 JI729_20720 4079554 .. 4079566 +  -3.3  -3.82031   TAATTATTTAAAAAT                GGTGT TCA ACTCC                TTTCCTCATCGTTAA  52 38
 JI729_20725 4079997 .. 4080041 + -13.1  -2.93357   AAGGCAAAAAAAGCA AAAAGAAAGACCGTGCTTCCT TTT AGGAAATACGGTCTTTTTTTA TACTTTGAAGTACTT 100 0
 JI729_20745 NONE
 JI729_20750 4082893 .. 4082903 +  -5.4  -5.95946   GTGAGCAATTATTTT                 TCGT TAT ACGA                 TTTTTTTATTATTAC  91 177
 JI729_20755 4083788 .. 4083813 + -12.7  -5.37345   TTTACTATAAAAAAA         TAAGAGGTGGC TATC GCCATCTCTTA          TTTTTTATAATTCCA 100 31
 JI729_20765 4085216 .. 4085236 +  -9.8  -5.40004   ATAACATACAAAAAA            CTAGCTGA ATAAA TCAGCTAG            TTTTTTCATTTCATC 100 40
 JI729_20775 4087074 .. 4087093 + -10.8  -4.66953   GAGACTGTCTAAAAA            GAGCGTTA CCTA TAACGCTC             TTTTTCAGCTCTTCA 100 29
 JI729_20780 4087746 .. 4087773 +  -6.3  -4.60924   CGAGGCCTTTCAAAC        TGACGGATTGC TCCTTT GCAATGCGTCG         TTTTTAAGCCCTTTA  76 23
 JI729_20785 NONE
 JI729_20790 NONE
 JI729_20795 4089169 .. 4089189 + -11.2   -4.2361   GTCGTTATTGAAGAA            GGTGCCTT TTTTT AAGGCACC            TTTTAAAATTCTCTT 100 453
 JI729_20855 NONE
 JI729_20860 4100179 .. 4100223 + -15.3  -3.94067   CGCGAATCATTTTCT ATCAAAATAAAGCTCCTTCTG CTT TAGAAGGAGCTTTATTTCGAG TTATTCTCTATCCTC 100 16
 JI729_20870 4100972 .. 4100987 +  -3.4  -2.94912   ACAATTTTCAGAAAT              TATATT ATAA AATATA               TGTATGACTTAAGGA  44 127
 JI729_20875 4101651 .. 4101678 + -14.3  -5.01811   TGCAGTAAATAAAAA        TCCCCTAGTGT AATAAG ACACTAGGGGA         TTTTTGGTTTGCTAA 100 33
 JI729_20930 4108220 .. 4108277 + -13.9  -3.62096   TATAAACTAACAATT TAATTTCTCATATAAAAAGAAGCCAAT AATA ATTGGCTTCTTTTTATATGAATGAATA TTTACAATAGTAAGA 100 23
 JI729_20935 4108593 .. 4108609 + -10.9  -5.63103   GGCTGGACATTAAAA              GATGGCA TTT TGCCATC              TTTTTTTAATTCCGG 100 28
 JI729_20940 4110101 .. 4110126 +   -12   -5.5074   TCATAATGAAAAAAA         GACGCTAACA TACAAT TGTTAGCGTC          TTTTTTATTCCGTTC 100 35
 JI729_20955 4111436 .. 4111456 + -12.7  -5.32944   TATTATGTAAAAAAA            GAACGTGAT CCA ATCACGTTC            TTTTTTCATTATACG 100 31
        metI NONE
        metC 4122134 .. 4122163 +  -8.8  -4.97402   ATGCATAGAGAAAAA       GAAGATATGAGA TTAGGT TTTCATATCTTC        TTTTTCTGCGTTTTA  93 33
 JI729_21000 4122879 .. 4122900 +  -6.7  -5.09259   CATTATCACCATAAA           GAAGC-GAAT TAC ATTCAGCTTC           TTTTCTTTTAACCTG  83 97
 JI729_21005 4123644 .. 4123669 + -14.9  -5.55695   AGTCGTATTAAAAAA         CAAGACACAGT ATAT ACTGTGTCTTG          TTTTTTATATTGTTA 100 138
 JI729_21020 4125807 .. 4125839 + -13.6   -2.6162   TCGAGATTTCACACA      AAAAAGAGGAAGGG TTCCC CCCTTCCTCTTTTC      ATATTTCACAACTTA 100 63
 JI729_21095 4141089 .. 4141102 +  -6.7  -6.34424   TAAGAACGAAAAAAA               TGCCT AAAT AGGCA                TTTTTTTTTTGGACA 100 38
 JI729_21100 4141573 .. 4141585 +  -5.5  -4.04474   ATAGTAAAAGTGAAA                CCGAG TAC TTCGG                TTTCTATAGCCCTAT  68 84
        ispG 4142786 .. 4142817 + -15.4  -4.42386   CAAGAACAATAAAAA      GAAGGTTGC-CACAA TAT TTGTGAGCAACCTTC      TTTTCTACGTAAAAA 100 29
 JI729_21130 4146353 .. 4146371 + -11.7  -3.71321   CAACTACTAAAATAA             GGAGGGG ATTTC CCCCTCC             TTATTGCGCTTTAAT  95 26
 JI729_21145 NONE
        ispH 4150777 .. 4150799 +  -9.9  -5.74684   GAACAATAATAAAAA          CCGTTGC-CC TAAT GGAGCAACGG           TTTTTATTTTTCTTA 100 32
        rpsT 4182977 .. 4182992 +    -9  -5.71712   AAGGCGTTTAAAAAA              CGATCC ATTT GGATCG               TTTTTTTATATACAA 100 39
 JI729_21320 4184540 .. 4184560 + -11.2   -4.1193   TTATCGGTTCTTAAA            GACTGCCA CTTCA TGGCAGTC            TTCTCTTTTTCATCT 100 27
 JI729_21340 4189174 .. 4189200 + -13.9  -4.98758   ATCTTCTTTATAAAA         CAAAAGCAACC TTCTC GGTTGCTTTTG         TTTTTATCCGTTTTT 100 168
 JI729_21385 4194855 .. 4194868 +  -3.8  -3.84961   CGAATAAACAAGTAC               TCCC ATCTAG GGGA                TTTCATCATTAAGTA  54 139
 JI729_21400 4197800 .. 4197825 +  -7.8  -5.54338   GTATAAAAATAAAAA         GAGTTATTTT CTTTGA AAAATAACTC          TTTTTATTTTACTTA  95 35
 JI729_21420 4201395 .. 4201414 +  -8.6  -5.43487   ACCACTATAAAAAAA            GGTTCTCG CCAA TGAGAACC             TTTTTTCTATCATTT 100 31
 JI729_21435 4204481 .. 4204498 +  -2.1  -2.90028   TTAGAAAGGAGACAC             CT-AATTG AAG CAATTTAG             CTATTTTATGGTAGG  41 37
 JI729_21440 4205376 .. 4205400 + -17.3  -4.43213   GAAAAATAACATAAA          CGGGTATCTCA TTT TGAGATACCCG          TTTTCATATATTAAG 100 32
 JI729_21460 NONE
 JI729_21465 4208030 .. 4208080 + -24.7  -3.53811   AATAAAACGCATAAA TAACAATAAAAAACTGCCTAAAA TGATC TTTTAGGCAGTTTTTTATTGTTA TTTCACCGAGATGAC 100 23
 JI729_21475 4212758 .. 4212784 + -19.6  -5.09895   ACCGCGATTTTTATC         GTCCCTATCGGA TTT TCCGATAGGGAC         TTTTTTGCATCCATC 100 492
 JI729_21480 NONE
 JI729_21485 4215261 .. 4215284 +  -9.6  -5.09259   ATAAGAAAATAAAAA          AGAGAAGCCT TTTT AGGCTTCTCC           TTTTATTTTGAAATG 100 29
 JI729_21500 4217272 .. 4217292 + -14.1  -5.27923   CTAAATAATAAAAAA            GAAGCCTGT TAA ACAGGCTTC            TTTTTTATCCCCTTA 100 37
 JI729_21570 4229505 .. 4229527 +   -12  -5.37593   TGCGTTAACAAAAAA           GAGAAGCTCC TAA GGAGCCTCTC           TTTTTTAGTTTAGAG 100 33
 JI729_21640 4243453 .. 4243477 + -11.5  -3.59946   ATAAATATATGATTA          GCCCTCTATTT CTT ACATAGAGGGC          TTCTATACTTACACA  93 37
 JI729_21650 4244948 .. 4244967 + -12.2  -4.84529   GGGTGCATAAAAAAA            CTCCCTTG TCTA CAAGGGAG             TTTTTCACTTTATCG 100 31
 JI729_21690 4252978 .. 4252994 +  -4.3  -3.23274   AACATAAACGAAAAC              GTCACCA TTA TGGAGGC              TTCGCTTATGAAAAC  50 39
 JI729_21695 4253647 .. 4253682 + -16.4  -4.80736   GCTGAGAATTAAAAA    CAGGGATGTCACTT TTTTGACT AAGTGACATCCCTG     TTTGTTTCTTTGGTG 100 29
       spoVB 4270481 .. 4270508 + -13.6  -3.36289   AATAAGTTGAAACTT        TAATCAGTGGGG TAAT CTCCACTGATTA         TTAGTTAAACTAATC 100 36
 JI729_21765 4271683 .. 4271721 +  -7.4  -3.80855   TCAAAGCAAAGTAAC   TAAAAAAGGCCCTGCATA TTT TATGCAGGGCCTTCCAAA   TTAGTTTTTCACAAC  71 23
 JI729_21800 4277185 .. 4277227 +   -21  -3.61922   TTTAGCTAAAAATAA ATAAGAAAAAAAGCAGCTCA CCA TGAGCTGCTTTTTTTCTTAC TTTGAACTGCGTATT 100 22
 JI729_21810 4278600 .. 4278621 + -14.5  -5.16132   ACGAAGATGAATAAA           GAGGAAGGG CTCC CCCTTCCTC            TTTTGTTTTGCTATC 100 27
 JI729_21840 NONE
 JI729_21845 4286936 .. 4286962 +  -5.2  -5.20216   GTTTATTAATGTAAG         GCACAGAG TTTTTATCATT CTCTGTGC         TTTTTTAATGCTATA  79 32
 JI729_21850 4287683 .. 4287706 + -11.1  -5.60556   AGGTAAAACAGTATT          GAGTCCATC ATACCA GATGGACTC           TTTTTATTTTCTCTT 100 52
 JI729_21855 4288310 .. 4288342 + -13.6   -4.7261   ACCTATTCCTAACAG      AAAGCCGTCCTAAA TATCT TTTAGGACGGCTTC      TTTATTTTGCTAGCT 100 59
 JI729_22020 NONE
 JI729_22025 4323300 .. 4323319 +  -9.2  -5.98675   TTAGCAAAACAAAAA            CGCGCGAC ATTC GTCACGCG             TTTTTTGTTTTTGTA 100 46
 JI729_22070 4334243 .. 4334266 + -12.6  -4.65916   AAAACAAACAAAAAA          CCTTGTTATC AGAA GATAACAAGG           TTTTCTTAGCGTCCC 100 44
 JI729_22080 4335368 .. 4335391 + -12.6  -5.44119   TAGACAAACAAAAAA          CCTTGTTATC AAAA GATAACAAGG           TTTTTTTAGCGTCCC 100 151
 JI729_22155 4347167 .. 4347190 + -12.6  -5.14563   ACTTAAGAAGAGAAA          TCACCTATAG AATC CTATAGGTGA           TTTTTTCATGAAGAA 100 57
 JI729_22165 4348840 .. 4348870 +  -8.5  -5.55769   ATCGGCATAAAAAAA      GGGTATGGTTCTAT AGAG AT-GAACCATACTC       TTTTTTATTGTCCCC  95 31
 JI729_22170 4349672 .. 4349698 +  -8.1  -6.01369   TCTGAATAAAAAAAG        GCGAGC--CCTCA TTA TGAGGAAGCTCGC        TTTTTTTATTCTTTC 100 54
 JI729_22190 4353530 .. 4353573 + -25.8   -4.2074   TTAAAATCATTTGAT GTAAAATAAAAGAGGATGGC ATTC GCCATCCTCTTTTATTTTAC TTTCTCTGTTAAAGG 100 17
 JI729_22205 4356181 .. 4356203 + -13.6  -5.31519   ATGGAAGACAAAAAA           TAAGAGAGCA AAT TGCTCTCTTA           TTTTTCTTTCACTCT 100 23
 JI729_22230 4360709 .. 4360736 +  -9.3  -5.63645   TAAGCATTACCTACA        GTCAACTAGAC ATATCA GTTTAGTTGAC         TTTTTTGTATTTTCA 100 38
 JI729_22275 NONE
        fhuB 4373119 .. 4373154 + -14.2  -2.53822   GGGAAGAAGGTTAAT    TAAAAGACGGCTTCAT ATAT GTGAAGCCGTCTTTTC     CTATTATGGCATAAA 100 23
 JI729_22295 4375072 .. 4375095 +  -6.8  -5.00642   TGTAATGACAAAAAA          GACAAGGTGT TTAC ATATCTTGTC           TTTTTCTGTAACTTG  82 36
 JI729_22300 4375555 .. 4375575 +  -6.1  -5.70522   TACATATACAAAAAA            GAGTTAGTG TAA CGCCAACTC            TTTTTTCTTATTCTT  95 51
 JI729_22340 NONE
 JI729_22345 4381323 .. 4381375 + -11.6  -4.27483   AGAGTACAAAATATC GTTCAAT-AAGAAAAGGAGCTCAAG TAAA CTCGAGCTCCTTTTCTTTATTAACC TTTAATTTTCTCGAT 100 17
        isdG 4383208 .. 4383253 + -16.5  -5.74086   CAGTCCTTTTTTAAA GTATAGAATATGAGAAGCGTT ATCT ATCACTTCTCATATTCTATAC TTTTTTCTTTAATTT 100 44
        rnhC 4399481 .. 4399500 +    -5  -5.68438   TAGTATCGACAAAAA            CAGGAG CCTACAAA CTCCTG             TTTTTTGTTTCATCC  91 38
 JI729_22430 NONE
 JI729_22435 4400105 .. 4400143 + -17.7  -3.27667   TAATAAGATGTAACA   CATAACAAAGGAGAGCC CTTAA GACTCTCCTTTGTTATG   TTAGCTTCGTTTCTG 100 28
        sspI 4407126 .. 4407149 +  -9.6  -5.40072   TAAGCAATTTGAAAA          TCACCTTTGC ATAA GCTAAGGTGA           TTTTTTTGCAGAAAA 100 38
 JI729_22470 4407852 .. 4407877 +  -8.3  -5.12916   GTTATCAATGAGAAA         GAGGCATCACT ACAG GGTGATACCTC          TTTTATTATTTTATG  93 30
 JI729_22475 4408704 .. 4408724 +  -9.8  -4.84262   TTCTTGAATTAGAAA            GAGGTATC CTCAC GATACCTC            TTTTATTAATTCTTA 100 29
 JI729_22480 NONE
 JI729_22485 4409617 .. 4409647 + -14.2  -3.69681   TGCATAAAGAACACA       AAAAAGCAGGGAAT TTA ATTCCCTGCTTTTC       TATTTGGTTTATTGC 100 34
 JI729_22500 4413015 .. 4413050 + -15.8   -3.3941   GGCCTTTTTAAAACA    TA-AAAAAGCGAAGGAG AAT CTCCTTCGCTTTTTCTA    TTAATTAAATGTAAT 100 30
 JI729_22540 4420216 .. 4420247 + -13.2  -2.57463   AATATCACTATAATA      CAAAAGAGCAAGCT TCTC AGCTTGCTCTTTTA       CTTATGACGACGGTT 100 28
        ytvI 4440621 .. 4440647 + -16.8  -3.51694   CAAAAAACTTACATG         TAATCAGTGGGA ATT TCCCACTGATTA         TTCCTTGTACTTATT 100 62
 JI729_22675 NONE
 JI729_22680 4453000 .. 4453026 +  -5.1  -4.49389   AGAAAGAAAAATAAA         GAAGGAGGGCT TTAGC ACCGCTCCTTC         TTTTCGTTCTAACAT  69 27
 JI729_22690 4454434 .. 4454487 +   -23   -3.5882   AAGAAGCCGAAGTCT ATGAAGCAACATAAAAAAGCATCA ATATTG TGATGCTTTTTTATGTTGCTTCAC TTTCAAAATCATATA 100 12
 JI729_22705 4456652 .. 4456680 +  -3.2  -4.84146   TACACACATAAAAAA        CCCTTCACTT TTCTTTTTC AAATGAAGGG        TTTCTTTTCTATAGT  64 30
        pepQ 4458620 .. 4458651 + -14.7  -4.15197   CAATTTGTAAAATAA      TAAAAAAGGCAGC TTGATT GCTGCCTTTTTTA       TTTCTCTACTATTTC 100 26
 JI729_22775 4465575 .. 4465598 +  -8.9   -5.1417   AATTTATAGATAAAA          CACCAAGTC CACATA GGCTTGGTG           TTTTTCATTTTATAA 100 39
 JI729_22785 4466582 .. 4466607 +  -8.9  -5.24515   TGATTAAAAGAAAAA         CGACTGCAGGC GAAT GCCATCAGTCG          TTTTCTTTCTTTATT 100 34
 JI729_22805 4470300 .. 4470310 +    -4    -5.626   AGCAACAAGCTCTTC                 TTCA TAT TGAA                 TTTTTTTCTGACATG  85 181
 JI729_22815 4471890 .. 4471911 + -10.1  -5.70829   CAACAAATTAAAAAA           GCGAAAGGC TTCG GCCTCTCGC            TTTTTTTATGCTCTT 100 30
 JI729_22825 NONE
 JI729_22830 4474014 .. 4474037 +  -9.6  -4.76191   ATCCAAAAGAAAAAA          GACGAAATCC TATA GGATCTCGTC           TTTCTTTTCATATAT 100 11
 JI729_22860 4479430 .. 4479467 + -23.1  -4.41616   TTTATAGGATTAAAA   TAACCGCAGAATTATGG AATT CCATAATTCTGCGGTTA    TTTATTTACCCCGAT 100 34
 JI729_22905 4490358 .. 4490384 + -10.9  -3.66844   AAGTAAACATAAAAA         TCCCCACCTCA GTTCG TTAGGTGGGGA         TTCTTCACATATGAA  90 6
 JI729_22915 4491663 .. 4491711 + -13.3   -5.5604   TATGTAAAAAGAAAA GAGCGAGTTATCGATTTAGTACG CCC TGTACAAAACCGATAGCTCACTC TTTTTTATTGATTAA 100 34
        rpsD 4493925 .. 4493958 +  -3.8   -5.8187   AGAGTATTATTAAAA     GCCTTAGGAACCTTG TTTAT CAAGGGGCCTG-GGC     TTTTTTTATTGAATA  85 57
 JI729_22930 NONE
 JI729_22935 NONE
 JI729_22940 4497036 .. 4497055 +  -7.8  -4.40298   TATAAAAAAAGAAAA            TCCGACTC ACAA GAGCCGGA             TTTCTTCATTTAACT  82 74
 JI729_22945 4497567 .. 4497582 +  -3.2  -3.42091   TGATTAATATTTAAA              CTAACG TTTA CGCTAG               CTTTTCCTTTGTTTC  48 63
 JI729_22950 4498311 .. 4498354 + -21.4   -2.9155   GGAAATTTTATCCTA TACATAAAGAAATCCGACTC ACAA GAGCCGGATTTCTTTATGTA TCTAATCTTGAGACG 100 57
 JI729_22955 NONE
 JI729_22960 4499813 .. 4499835 +   -15  -5.48514   GATTAAAACAAAAAA           GCTTTGAGGA AAT TCCTCAAAGC           TTTTTATTTATTAGT 100 314
        acuA NONE
 JI729_23005 NONE
        acuC 4507757 .. 4507781 +  -5.8  -4.91429   TTATACTAACGAAAA         GGAGGCTCGTT TTTG AAT-AGCCTCC          TTTTATTTGAAGTTT  77 32
 JI729_23015 4508846 .. 4508872 +  -9.5  -2.74605   TTATTATTAAGGAAA         GCTCACAGTCT CTATA AGACTATGAGC         TAAATTTTCAGAAGA  74 31
 JI729_23035 NONE
 JI729_23040 NONE
        mscL 4513808 .. 4513839 + -14.6  -2.97925   CATAATTGAACGGAT      AAAAAGGCATGTCC CTCG GGACATGCCTTTTC       TATATGCTATAACGT 100 36
 JI729_23055 NONE
 JI729_23060 NONE
 JI729_23065 4515252 .. 4515273 + -14.5  -5.38249   TGAATCCGAATAAAA           GCTCACAGC AATC GCTGTGAGC            TTTTTTATACTTACT 100 28
 JI729_23095 4521307 .. 4521328 +  -8.7  -5.80003   AAATAATAATAAAAA           CGCTCGG AATTTTCG CCGAGCG            TTTTTTATTTCTTCC 100 35
 JI729_23165 4535489 .. 4535512 +    -3  -4.96028   TAGCAGCATAAAAAG          GAGGGTTCCC ATTA GGTGAACCTC           TTATTTTTTTTGAAA  66 30
 JI729_23180 4537786 .. 4537837 +  -2.5   -5.9218   TTAAGTATTATTCTG AAGCAAGTAGTTGCTGTAAATATTG ATGC CAATA-TT-CAGCTTCTGCTTGCTG TTTTTTTGTTGTATG  85 37
 JI729_23205 4543820 .. 4543848 + -13.3  -4.39426   ATGTAAATAAATACA        TACCCCTTTCTAA TAA TTAGAAAGGGGTC        TTTTCTGCGCCTATA 100 55
 JI729_23220 4547864 .. 4547883 + -10.8  -5.64274   GCAGTATTAAAAAAA            GAAACAGG GATT CCTGTTTC             TTTTTTTATAGGTAC 100 31
 JI729_23225 4549523 .. 4549547 + -14.4  -4.90136   GTGAGCAATAATAAA          GAGGATGACC ATTTC GGTCATCCTC          TTTTTACTCTTCATT 100 30
 JI729_23240 4550959 .. 4550997 + -16.3  -3.87075   TTGTCCCAACATAAA   ACATAAAAAAGAGCTGG GTGAG CCAGCTCTTTTTTATGC   TTTATAAACGATCAT 100 27
 JI729_23255 4552320 .. 4552344 +   -13   -4.4261   TTTTTTTGTAAAAAA          GGACAAAGAG ATAAA CTCTTTGTCC          TTTTCATATTACCCA 100 63
        moaC 4557607 .. 4557644 + -12.9  -3.11786   ATTCATAATCCTTTC   TCCGTTGAACCTAAAGG ATTT CCTTTAGGTTCAACCTA    TATATCTTGCATATA 100 33
 JI729_23330 4565421 .. 4565431 +  -2.6  -2.95339   CGCATATTTTCCTTG                 TTTT TGC AAAA                 TATCTACCATTTTAT  43 204
 JI729_23340 NONE
 JI729_23345 NONE
 JI729_23350 4571021 .. 4571055 +  -2.9  -5.48213   TGAGAAATGATTGAA    CTCCTCTCTCCAGCATG ATA CAA-C-GGAAAGAGGAG    TTTTTATTTTAGATA  72 38
 JI729_23355 4571293 .. 4571319 +  -7.2  -4.90302   AAAATAACGAGCAAG         GCCGTCCCAAAA GTA TTCCGGGATGGC         TTTCTTTTATTAATG  85 34
 JI729_23360 4571890 .. 4571909 + -12.2  -5.56673   AGAAGCTGAAAAAAA            CTGCTAGG ATTT CCTAGCAG             TTTTTTATTATGGCT 100 19
 JI729_23370 4573446 .. 4573469 + -12.5  -5.13521   TTTCTATACAAAAAA          GCTCAGAGC ATAAAC GCTCTGAGC           TTTTTTAAATGATTT 100 13
 JI729_23425 NONE
 JI729_23430 4586758 .. 4586786 + -16.9  -3.34013   GATAAAGTGAAACTT        TAATCAGTGGGGG GAA TCCCCACTGATTA        TTAGTTGAACCAATC 100 36
 JI729_23435 NONE
 JI729_23440 4589246 .. 4589262 +    -8  -4.72497   CATAATGAAAAAAAA              CCACTC TACAT GAGTGG              TTTTCTTCATCACTG  85 36
 JI729_23455 4591774 .. 4591793 +  -9.3  -5.71712   CAGAAGTAAATTTCC            GCTGCCA TAAGAT TGGCAGC             TTTTTTTATATAAAA 100 32
 JI729_23460 NONE
 JI729_23465 4593609 .. 4593631 +  -9.2  -4.21974   GCTTAAATAGAAAAA           CTCCCTTC AAAAAAC GAAGGGAG           TTTATTACATGGTCA  89 35
 JI729_23480 NONE
 JI729_23485 NONE
 JI729_23490 4596127 .. 4596174 + -13.9  -3.29461   ATTCCAACGTAATTA TAAAT-AAAAAAAGCTTTGCGC TCACC GCGCAAAGCTTTTTTTCATATA TTATAGACCAGCTTG 100 19
        pckA 4599605 .. 4599630 + -14.9  -4.22949   CACTTACATAAAAAA         GAAGCTTACGT GAAA ACGTAAGCTTC          TTTCTATATCTTCTC 100 150
 JI729_23505 4600368 .. 4600378 +  -6.8  -3.04242   AAACGGTTAAACATA                 CCGA GTG TCGG                 TGCTTTCGTCTTCTT  60 443
 JI729_23515 4601077 .. 4601110 + -16.3  -4.36931   CCAAAAATAAAAAAA     TAGGAAAGCAGATCA TAGG TGATCTGTTTTCCTA      TTTTGATATAGGTTC 100 23
 JI729_23530 4604048 .. 4604078 + -14.9  -3.03243   CGGAAAACGAACCTA      CTGGTAGCACCGAG TTTA CT-GGTGCTACCAG       TATTACAGCATGAAT 100 142
 JI729_23550 4608414 .. 4608437 + -11.2  -5.59962   AATACTATGAAAAAA          GAACTTGTAT CGTT ATACAAGTTC           TTTTTGTTTCTTTTA 100 201
 JI729_23560 4612067 .. 4612100 + -22.7  -3.61517   AATCAAGCATAATAA     GAAAGAGGTCGTCCA CCGT TGGACGACCTCTTTC      TTATTCCCCCACACT 100 29
 JI729_23575 NONE
 JI729_23580 NONE
 JI729_23585 4615513 .. 4615548 +  -4.1  -4.75954   TTGGAAAAAGAAAAA    GAAGCTGACTCAAAAC AGTGC GCTAT-AGTCAGCTTC    TTTCTTTTACCTTTT  68 18
 JI729_23600 4618112 .. 4618148 +  -9.5  -3.73611   TTACATACAAAAAAA    GAAACCGGCTACTTTAC TTC GTAAAACAGCCGATTTC    TTCTATATGTTTCAT  84 257
        ytzI NONE
 JI729_23630 4619770 .. 4619782 +  -3.4    -3.724   TTACGGATTTTTTTA                GCAT TTCTC ATGC                TTCTCTTACTCACTT  52 84
 JI729_23635 4620333 .. 4620350 +  -4.1  -5.69262   AGCACAATAAAAAAA             CTGCC CTTTCACA GGCAG              TTTTTCTTTTTATCC  88 64
        yidD 4621231 .. 4621243 +  -7.7  -2.87132   AACTAAATCTAATTT                TCCTG TAT CAGGA                TCTATAACAAGACCG  64 58
        cydA 4623320 .. 4623332 +  -6.3  -2.91452   TGAGGGAGGTGTGGC                TCATG TCT CATGA                TATGCTTGCAATCAT  59 13
        cydB 4624361 .. 4624380 + -10.8  -5.29782   ACTAAGGTAAAAAAA            GACACTTC GTTT GAAGTGTC             TTTTTTATACGTATG 100 36
 JI729_23670 4626453 .. 4626475 +   -15  -4.37157   ATTTTCTTAATAGCA           TCCCATCCTT TGA AAGGATGGGA           TTTCTTATACTGATT 100 31
 JI729_23675 4627519 .. 4627552 + -12.5   -4.4846   TTAATCGTTATATAA     AAGAGGGTATGCCAA AATT TTGGCACACCCTCTG      TTTATTATTAAGTTG 100 37
 JI729_23700 4631294 .. 4631339 + -14.5  -3.30338   GTAAAAATTAAAAAG TAAA-ACAAAAAAGCTTTGCGA AAT TCGCAAAGCTTTTTTCTATTTA TTATGAGCAACTTGT 100 23
 JI729_23720 4634774 .. 4634792 +  -8.8  -5.23316   GAATACACAAAAAAA             GGGCGCTT AAT GAGCGCTC             TTTTTTCATATCGTA 100 16
         hpt 4640520 .. 4640551 +  -3.7  -4.53439   CCCAATTAATAGGGA      GAAGCTGTTCTAA AATACA TGGGAACAGCTCC       TTTCTTTCCATTTAC  64 174
 JI729_23760 4641500 .. 4641515 +    -9   -5.5208   TGTGTAATAAAAAAA              CGAGTG CTAG CACTCG               TTTTTTCTCTTCTAA 100 34
 JI729_23775 4643923 .. 4643969 + -19.3  -2.82193   TTTAGGACATAAATA G-TGATAAAAAAAGAGCTTGAA TAGT TTCAAGCTCTTTTTTTATCAAC TCTCCTCAATATCAT 100 25
 JI729_23815 4651300 .. 4651353 + -27.3   -3.0371   AGAGTCTAACCTTTT CAAAATAAAGAAGCTGCTCTTCCTT TTTA AAGGAAGAGCAGCTTCTTTATTTTA TACTTCTTCTTGACT 100 45
 JI729_23840 NONE
 JI729_23845 4656627 .. 4656650 +  -8.3   -5.0538   CATATGCAAGCAAAA          TGTATGAGA ACTCAC TCTCATACA           TTTTTTGCAATACAA  93 47
 JI729_23850 4658691 .. 4658719 +  -7.6  -3.06315   TTAAAACAAACTTGA        TGAAAAGAGTAT CTCTC ATACGCTTTTCA        TCTTCACCCTATTAG  68 37
 JI729_23855 NONE
 JI729_23860 NONE
 JI729_23865 4663444 .. 4663489 + -10.7  -4.81083   CAGCATATAAAAATA TGAAT-AAAATGGCCTTGTGCA TAT TGCACAAGGCCATTTTCAATAG TTTTTAATAATTAGC 100 23
 JI729_23960 4684122 .. 4684141 + -11.4   -4.8048   ATATTTCCTTTAAAA            GGAGCTGC TAAT GCGGCTCC             TTTTTCATATACCAA 100 28
 JI729_23965 4684968 .. 4684988 + -14.1  -4.88067   AAGAATAAAAAAAAA            GCATTCCGA AAA TCGGAATGC            TTTTTATCGCTAGCT 100 33
 JI729_23975 4686428 .. 4686472 +  -2.3  -3.70902   AATAAAATAATAAAA TTAAAACACCCTTGCTT GCAGTAATAAA GTGAAAGGGTGTTTTAA TTTACGTCTACAAAC  49 73
 JI729_23980 4686929 .. 4686949 +  -8.3  -5.10163   ATGAAAAAGAGTAAA            CAGTGCC CTTATCA GGCACTG            TTTTATTTTGACATT  93 210
 JI729_23985 4688023 .. 4688063 + -17.3  -3.31598   CTTTCTTAAGCAAAA  TAAATAAAACGAGCTTAAT TTT ATTAAGCACGTTTTATTTA  TTAATATCCATTTCT 100 243
 JI729_24155 4707111 .. 4707128 +  -5.6   -5.8096   GTAACGTAAAACAAA             CTCTCT TTAATT AGAGAG              TTTTTCTTTTTTCTA  93 37
 JI729_24160 4708661 .. 4708697 + -24.1  -4.11371   GACTTTTCGATAAAA    TAATAAAAAGCGACCGG AAT CCGGTCGCTTTTTATTA    TTTTAAACGCTCTTC 100 499
 JI729_24175 4710629 .. 4710672 + -20.7  -3.06679   ATATATATCATAAGA TAAAGTAAAAGAGGAACGC TCATAT GCGTTCCTCTTTTACTTTG TTAACTCGGACTCTT 100 99
 JI729_24195 4714223 .. 4714247 + -17.3  -5.80364   ACTGAATAAACGAAA          GGCAAGATGAC ATC GTCATCTTGCC          TTTTTTTGTTAACAT 100 42
 JI729_24200 4715254 .. 4715276 + -14.9  -2.78715   GGATAATATAAAAAA           GGCTGTCGG AAATC CCGACAGCC           TATAATGAACAGCTT 100 124
 JI729_24210 4716804 .. 4716837 + -11.1  -4.14615   TTTCATAGTAAGAAA     GGAGTCTGTCC-CGAA TCA TTCTTGGGCAGACTCC     TTTGTCATATTTTGT 100 33
 JI729_24225 4718275 .. 4718305 +   -12   -3.3382   CTCTAAAAAACAAAA       CGACCAAATTACAT AAT GTGCAATTTGGTCG       TTACTGTGTGCTCAC  95 35
 JI729_24235 4720545 .. 4720582 + -15.9  -3.40309   ACGCTACCTTATGTA   GTAGAAAAAGCGCTCTGA TAA TCAGGGCGCTTTTT-TAC   TTATAGCTACTTATC 100 25
 JI729_24245 4722129 .. 4722164 + -16.9  -5.86465   GGAACCGCGGGCAAA    CGCTCGTCCCTAGGC AAATAA GCCTTGGGATGAGCG     TTTTTTTATGTTCTT 100 242
        glyS 4723648 .. 4723670 +  -9.9  -5.93252   TAATTATAAGAAAAA          GAGGCTGCTC ATAA GAGC-GCCTC           TTTTTTATTTTTCAC 100 38
 JI729_24260 4724947 .. 4724963 +  -2.3  -4.35926   ACAGGAGGTTAACAT              TATGAGA AGA TTTCATG              TTTTAGATTTAGCAT  54 75
 JI729_24265 4725550 .. 4725579 + -15.3  -5.45652   TTCATAATAAAAAAA       TGAGTTATTTCAG TATA CTGAAATAACTCA        TTTTTTATTAAGACT 100 34
 JI729_24280 4729417 .. 4729447 + -14.2  -4.65078   AAGAAATAGGAAAAA       GGGTACTTTAGACA TCC TATCTAAAGTACCC       TTTTATTAAAAATCT 100 387
 JI729_24335 4739032 .. 4739065 + -11.1  -4.54047   TTTTAATATGCAAAA     ATAAAGCTCCTTCCA TACG TGGAAGGAGCTTTCC      TTTTATATAACATAA 100 35
 JI729_24345 4750165 .. 4750181 +    -8  -5.71983   GTTAGCCTAAAAAAA              GATGCC CATTC GGCATC              TTTTTTTGTCGTTAA 100 31
 JI729_24350 4751580 .. 4751604 +  -5.7  -5.09895   TCGATTAGCCACTTA          GAGTCATGTAT TAT ACGCATGGCTC          TTTTTTGAATGGATC  79 33
 JI729_24360 4753005 .. 4753029 +  -8.7  -5.09685   TTGAAAACAAAAAAA          GGAATTGAC CCTGTTC GTCAATTCC          TTTTTATCTGTCTTA 100 18
 JI729_24385 4757489 .. 4757511 + -14.2  -3.42684   GGTTAATACTTTACA           GGCTGTCTAC TAT GTAGGCAGCC           TCTTTGCATCAGTTT 100 35
 JI729_24390 NONE
 JI729_24395 NONE
        fetB 4759572 .. 4759592 + -12.6  -3.91905   GTGACATAATAAAAA            GAGGAGGC TATTC GCCTCCTC            TTCTATTTACTTATG 100 215
 JI729_24425 NONE
 JI729_24430 4763377 .. 4763426 + -16.8  -4.27467   GATATGTCTATGAAA AAACTAGTAGAAAGCACAATGT AATTTC ACATTGTGCTTTCTACTAGTGC TTTATATTCCTCTTG 100 2
 JI729_24460 4767405 .. 4767422 +  -9.9  -5.80364   GTCACTTGCTAAGAA             GAGACCA ATTT TGGTCTC              TTTTTTTATTCACAT 100 67
 JI729_24465 4767792 .. 4767829 + -17.4  -4.13767   TTACATAAAATTGTG   GTATAAAAAAGAGACC TCCATC GGTCTCTTTTTTATAC    TTTTAAGATAGCCAA 100 45
 JI729_24475 4769458 .. 4769482 +  -9.3  -3.93782   TAATAGTGTTTTCTA          GGCCGTCAG GTTCATG CTGACGGTC          TTTCATATTCCATCA  86 38
 JI729_24485 NONE
 JI729_24490 NONE
 JI729_24495 NONE
 JI729_24500 4774592 .. 4774608 + -10.9  -5.77988   TTTGTCATCTTAAAA              GACACTC CAA GAGTGTC              TTTTTTTCTATATCT 100 182
 JI729_24505 4775765 .. 4775787 +   -15  -4.33621   AATATTAGAAAAAAA           GCTGTTCCAA AGT TTGGAACAGC           TTTCTTCATTACATC 100 220
        glpX NONE
 JI729_24530 4779237 .. 4779257 + -11.9  -5.33848   ATAATTTATCTTAGG            CACCAGCTG TTT TAGCTGGTG            TTTTTTCATTATAAT 100 37
 JI729_24535 4780109 .. 4780130 + -11.7  -6.08342   AGAATATACAAAAAA           TCCTCTTAC AATC GTAAGAGGA            TTTTTTTATTTCTTC 100 44
 JI729_24545 4781132 .. 4781166 + -23.2  -5.84011   TGATATGATTAAAAA     GTAAAACAGGTGGAGA AAA TCTCCACCTGTTTTAC     TTTTTATTTTTTATT 100 22
 JI729_24555 4782825 .. 4782846 + -11.7   -5.3236   TACCGGAGTAAAAAA           TAAACCACC GATT GGTGGTTTA            TTTTTTATGGATTGT 100 30
 JI729_24565 NONE
 JI729_24570 4784520 .. 4784540 + -12.7   -5.4148   GAGTATAAACAAAAA            GAGAGCTAA TCG TTAGCTCTC            TTTTTTCATTATTTA 100 17
 JI729_24580 4786616 .. 4786641 +   -12  -5.26316   GCAAATACAAAACGA         TAACCGTAGC TGCATT GCTACGGTTA          TTTTTTATCCAGTAA 100 23
 JI729_24675 4803575 .. 4803598 +   -11   -4.6955   TAGCATGACAAAAAA          GCAGACTGTG GCTT CTCAGTCTGC           TTTTATCTATTAGTA 100 38
 JI729_24730 4815148 .. 4815196 +  -7.6  -4.55295   AATAACGCTATATTT TTGGGCAGAGAACGTGGC-ATAA TGAT TAATGGCTGCTTTTTCTGCCCAA TTTATTTGTAACAAA  83 36
 JI729_24735 4816062 .. 4816089 + -12.9  -5.03314   TTTCAGCAATTAAAA        TAACCAAGGAG TATTTT CTCCTTGGTTA         TTTTTTAACCATACC 100 23
 JI729_24760 4820950 .. 4820975 +    -7  -4.78029   ATTAAATAATAAAAA         GGAGTCT-AGT TTTTC ACTTAGACTCC         TTTTCGTTTTGTTCC  80 40
 JI729_24780 4824528 .. 4824551 +   -14  -2.64422   AATCATTAAAAGGGA          CCGATTTCTG CTAA CAGAAATCGG           TCCTCTCACGTATCT 100 32
 JI729_24800 4827830 .. 4827875 + -15.9  -3.65224   AACCGGTTAATAAAT TAAAGGGCATAACATATTA TATATGAC TAATATGTTATGCCCTTTG TTATTCAACTAACGT 100 41
 JI729_24810 4829294 .. 4829314 + -14.1  -5.25799   GAAAGTAACTCTTAA            GCTGGAAGA TAC TCTTCCAGC            TTTTTATATTGTTTT 100 26
 JI729_24840 NONE
 JI729_24845 4833994 .. 4834015 +  -6.7  -4.62561   CAAGATTTATGTGTA           GCCAAGA-AT TTT ATGTCTTGGC           TTATTTTATTTATTC  78 49
 JI729_24850 NONE
 JI729_24855 4836503 .. 4836532 + -15.8   -5.5604   TTACTCTGTTTCGTT       CGCCCGTTATCC TTATTT GGATAGCGGGCG        TTTTTTATTACTTAA 100 108
 JI729_24860 NONE
 JI729_24865 4837792 .. 4837815 +  -9.7  -5.07275   TACTGCATAACAAAA          GACCTTTCA TTTACT TGAAAGGTC           TTTTTCTCTATCTCA 100 31
 JI729_24875 4840699 .. 4840721 +  -6.2  -4.68593   ACAGCATGCAAAAAA           GGATCCCTTC ACG GATAGGATCC           TTTTTGCATGCTCAC  76 8
 JI729_24880 4842944 .. 4842975 + -15.4  -4.05875   TCCTAAAGGAAATAA      GAAAGCTTTATTCC AACT GGAGTAAAGCTTTC       TTTCAATTTTTTACA 100 145
 JI729_24885 4844729 .. 4844777 + -14.4  -2.84527   TTTTAAAACAGAATA GATGTTC-AAAAAATATCCCTCTT GCG AAGAGGGATATTTTTTTGAGC-TC ATTTCCTGCACATTA 100 25
 JI729_24890 4845203 .. 4845243 + -13.7  -4.18506   TTGCGGATAGCGGGA TAA-AGAAAAGACCTGAC TAGGAT GTCAGGTCTTTTCTCTTA  TTATTTTACACCTAC 100 62
 JI729_24925 4852470 .. 4852497 + -14.3  -4.86731   TGTTTAACAAACAAA        GGCCCTATTAC TTCACC GTAATAGGGCC         TTTTATTTACAACAG 100 34
 JI729_24930 4853232 .. 4853259 +    -7   -4.8622   GCTCAGAATTGCAGG        GCACTTCAAGCT CTCG ACCTTGAAGCGC         TTTTTGCTTCGAGCG  82 186
 JI729_24935 4854535 .. 4854565 +  -9.8  -3.82208   TAACCAAATTAAAAA       CACATGCCGTCTTA AAT TAAAACGACATGTG       TTTCCGTATTTGCTA  86 385
 JI729_24950 4855566 .. 4855576 +  -2.6  -3.48378   TGAGAATATTATCAA                 TTAT GGT ATAA                 TATTCTTGTCACAAT  46 38
 JI729_24955 4856122 .. 4856147 +  -9.9  -5.95449   TGAATAATATTTCAA         TCACCTTAATG AATG TATTAAGGTGA          TTTTTTATTTTCTTT 100 34
 JI729_24960 4857436 .. 4857467 + -13.2  -3.68738   AAGCAAGTTAAACAA      AAAAAGCAATGAGC CTAC GCTCATTGCTTTTC       TTAATTTATTAAAGC 100 30
 JI729_24985 4864693 .. 4864740 + -19.8  -3.55487   GTTTCTGAAGCTGAA TAATA-AAAAAGCTCGTAAAACA TAA TGTTTTACGAGCTTTTTCTATTA TTGTACTTGCTCTAA 100 23
 JI729_25010 4872930 .. 4872963 +  -9.8  -6.04953   GAATAATAGGAAAAA     GGAAAAAACGAACA TGAATT TGTTCATTTTTTCC      TTTTTTTCTTTATAT 100 35
 JI729_25015 NONE
 JI729_25020 4875029 .. 4875061 + -17.1  -5.28778   TACTAATCTGAATAT      AAGCCCGAATCATGC CCT GCATGGTTCGGGCTA      TTTTTTATCCGTAAT 100 35
        crcB NONE
        crcB 4882562 .. 4882579 + -11.3  -5.52384   GCGGAATATAAAAAA             GCGACTC TATT GAGTCGC              TTTTTTTCATAAGAA 100 30
 JI729_25085 4887800 .. 4887825 + -12.7  -2.98387   ATTGCAAATAAAAAA         GTAGTGTAGAC TTAT GTCTGCACTAC          TACTCTTTTCTCAAA 100 52
 JI729_25100 4890282 .. 4890323 + -14.9  -2.82449   AATTACAGTTCCATA TG-AGAAAAGAAAGGATAAG TAT CTTATCCTTTCTTTTTTTCA ATTGTCTTAATAACA 100 43
 JI729_25110 4892233 .. 4892258 + -11.9  -4.56607   TTTGTGACCAAGTAA         AAAGCGCCCTA CTTA TAGGGCGCTTG          TTTTATACTTAATGA 100 198
 JI729_25155 4900875 .. 4900898 +  -5.2  -4.54727   AGCAGAAGCGGATGC          GGATGCGGAT GCAG ATCCTCTTCC           TTTTCCTTTACCACC  71 194
 JI729_25185 4906932 .. 4906969 + -12.9  -4.43859   TGAACAATTTTAGCA   TAAAAAACAGACCGTGA TTTC TCACGGTCTGTCGTTTA    TTTTCTACAATTATC 100 28
 JI729_25240 NONE
 JI729_25245 4921818 .. 4921846 +    -6  -4.56597   TGGAATAAATAAAAA        GCCCTAACCTAC AAAAC GTAAGTTAGGAC        TTTTTGACGCGCCCA  73 83
 JI729_25255 4922357 .. 4922401 +   -11  -3.19026   GAACCAATCTTGCTG TGAAATAGAAAAAGGATGAT ATGCA GTCATCCTTTTTCTATCACA TTACATATTGCAATA  85 42
 JI729_25260 NONE
      spoVAC NONE
      spoVAD NONE
      spoVAE NONE
 JI729_25280 NONE
 JI729_25285 4925907 .. 4925930 +  -4.6  -5.49579   GACTAATTATCGAAA          GAACGCTT CAGTTAAA AGGCGTTC           TTTTCTTTTTTCTCC  81 35
        clpP 4926974 .. 4926992 + -11.7  -5.58179   TAGATACATAAAAAA             GCGCCCT ATTAC AGGGCGC             TTTTTTATTATCATG 100 280
 JI729_25400 4948527 .. 4948546 + -10.8  -3.61654   AAAAAACAGAGTTGA            CCTTCACA TTAG TGTGAAGG             TTTACAATACATGTA  90 26
 JI729_25405 NONE
 JI729_25410 4949732 .. 4949754 + -12.8  -5.65177   AAGGGCGACGTTTAT           CCTCTCTAGT GAA ACTAGGGAGG           TTTTTTTATGACTAT 100 267
       abc-f 4951464 .. 4951495 + -20.4  -4.03234   ACTTCGACATATAAA      GTAAAAAGCCGTGC ATCA GCACGGCTTTTTAC       TTTATATGCGGACAG 100 93
 JI729_25535 NONE
 JI729_25540 4977103 .. 4977127 +   -10  -5.39681   TCAGCCGTAACAAAA          AGGCCCAATC TATGC GATTGGGCCC          TTTTTATTTACTTAT 100 31
 JI729_25555 4981295 .. 4981324 + -13.8  -5.59534   TATGAAATATTCAAA       TAGCATCCTCTT TCTTAT AAGAGGATGCTA        TTTTTTATTCTCATT 100 62
 JI729_25560 4982196 .. 4982223 + -11.4  -5.40873   GACACAAGATTGTAA        CAGCTTTAGTGC CTAT GTGCTAAAGCTG         TTTTATTTTTCTCTT 100 26
 JI729_25565 4985124 .. 4985157 + -13.4   -2.6921   CACCTTATATAATGA     GAAAAGGCTGTTCCA ACATA TGGA-CAGCCTTTTC     CTCTATTTCTTTACT 100 174
 JI729_25575 4986952 .. 4986973 +  -8.7   -5.0916   TTTATAAATAAAAAA           CGACGGC ATGATGTA GCCGTCG            TTTTTCTATTAAAAC 100 34
 JI729_25620 4994937 .. 4994969 + -19.4  -4.48713   TTTGCTTAATAAATA      GAAAGAGGATGCTC CAAAC GAGCATCCTCTTTC      TTTGTTGTTAATCCA 100 32
 JI729_25625 NONE
 JI729_25630 4996661 .. 4996689 + -14.8  -4.19735   AACGCAAATAAAAAA        TAAGCTATCCGA AAAAA TCGGATAGCTTA        TTTCATTTTAAGAAA 100 30
 JI729_25640 4999732 .. 4999766 + -17.4  -3.78168   AATTATATCAACAAA     TAAAAGTTGCCACCCT CAT ATGGTGGCAACTTTTA     TTGTTCACTCTTTTT 100 41
        cydA NONE
 JI729_25660 5003730 .. 5003765 + -14.2  -4.60713   AAATAATATAGCATT    GGAGTCTGTTCCAAAA GGCA TTTTGGGATAGGCTCC     TTTTGTCATGTTTTG 100 35
 JI729_25665 5005516 .. 5005553 + -21.6  -3.55219   GCCTTATAAACAACA   GAAGCCCCATTTGCTA CCGTCT TAGCAAATGGGGCTTC    TTCTATAATAAAGTT 100 32
 JI729_25680 5009971 .. 5009997 + -22.4  -4.37013   ATGTTTGTTTAAAAA         GGGCCCCTTGCA ATT TGCAAGGGGCCC         TTTTCCTAATTCGTT 100 51
 JI729_25695 5013387 .. 5013409 +  -8.5  -5.92399   TAAAGAAGAAAAGAA          GAGCGCTGAG TAAT CTCAGC-CTC           TTTTTTATTTTCTTC 100 13
 JI729_25700 5014965 .. 5014988 +  -6.8  -5.58179   GCATTTAAATGGAAA          TCAAGGTGTA ATTT TATGCCTTGA           TTTTTTCTTGTAATC  90 77
 JI729_25705 5016862 .. 5016883 + -13.1  -5.22312   ATTAATAGTTTCAAA           GCCTTCTAG TTTA CTAGAAGGC            TTTTTTGCTATGAGT 100 40
 JI729_25710 5018438 .. 5018462 +  -9.4  -5.15634   ATAAACTTATATAGA          GTCTTCTCTT TCTAC AAGAGGAGAC          TTTTTTCATGCAATC 100 37
 JI729_25715 5019439 .. 5019457 +  -3.2  -3.27772   AAGGACAGACACTGT             TATGATGA CTC TCGTTATA             CTTCTTTTATTCCTT  47 21
 JI729_25720 5020748 .. 5020778 + -14.9  -4.19678   GATAAATAATAAAAA       TAAGCACAGAGCG CCGTA TGCTCTGTGCTTA       TTTATTGCCGTATAA 100 32
 JI729_25730 5024494 .. 5024529 +  -9.1  -4.59342   CAATGACTGCTAAAT    TACAAGCCGGTTCTC TTTATT GAGAGCTGGCTTTTA     TTTATTTATAATACA 100 42
 JI729_25735 5024962 .. 5024988 + -16.8   -2.9155   TTTAGCTACAAAAAA         GAAGCTGTTCAA ATA TTGAACAGCTTC         TCTCATATTAACGAG 100 122
 JI729_25755 NONE
 JI729_25760 5033160 .. 5033186 +   -16  -5.47159   TACCCGCAAAAAAAA         GCGCTAATCTCG AAA TGAGATTAGCGC         TTTTTTCTATTCCAA 100 232
 JI729_25770 5034015 .. 5034043 + -11.1  -3.61517   AAAGTAAAACTCGGA        TCAGTGGGGAT TTTATTC ATCCCCGCTGA        TTATTAGCCCGCAAT  90 39
 JI729_25775 5034343 .. 5034372 + -15.2  -5.45652   CTATAAAATGAAAAA       GACGAATCTGCA TCATTT TGCAGATTCGTC        TTTTTTCTTCGGCAT 100 35
 JI729_25785 5035421 .. 5035471 + -15.2  -5.09245   GATTCATCACCTTAA TAACAAATAGAATGGAAGGT-AG TATTTC CTCACCTTCCATTCTATTTGCTA TTTTTATCCTTTTAC 100 26
 JI729_25805 5038653 .. 5038677 + -10.2  -3.92178   ACATAATGTTTACAA          TAAAAAGAGC AAATC GCTCTTTTTA          TTTAATTGAGCTGCT  93 35
 JI729_25810 5040635 .. 5040647 +  -4.9  -3.72905   CAGAAATTATCTTCT                TTATG GCA CATAA                CTTTTTTAATGTCCT  59 94
 JI729_25835 NONE
 JI729_25840 5045734 .. 5045759 + -10.6  -4.62336   AATAAAAATATAAAA         GCTATCCAAT ATAAAA ATTGGATAGC          TTTTTCAAATAAAAT 100 98
 JI729_26065 5092036 .. 5092068 + -12.1   -5.1861   AGTTTCTACAAAAAA      CCCCCAGTATGAA CAAATAA TTCATACCGGGGG      TTTTTTAGTGCTAAA 100 6
 JI729_26165 5107237 .. 5107262 + -13.5  -4.82901   AGATTCTTGAAAAAA         GAACTTACTTC AATT GAAGTAAGTTC          TTTTTATGAAACAAA 100 58
 JI729_26170 5108009 .. 5108049 + -13.4  -3.67597   CTGACCAGCTAAGGT  TCTCTCGCACAAAAGGTG CTTTT TACCTTTCGTGCGGGAGG  TTCTTAGATGCGAAG 100 64
 JI729_26245 5122294 .. 5122311 +  -8.4  -5.87996   GAATATTAAAAAAAA             GCGCCT TATTTC AGGCGC              TTTTTTTATTACTTG 100 32
         cls NONE
        uvsE 5134839 .. 5134877 + -14.1  -5.00884   AATTAAAAGAATAAG   TGGTGCAATGTTACAGT GGTAA ATTGTAACTTTGCACCA   TTTTTTCAAAAAAGT 100 4
 JI729_26300 5137655 .. 5137677 + -12.1  -5.03314   TACTCCATAAAAAAA           CAACCGTCT AAGTA AGACGGTTG           TTTTTTAGAACTCAA 100 15
 JI729_26315 5140705 .. 5140731 + -13.9  -4.96848   CAATAATTATAAAAA         GAAGGTTACCT CTCAT AGGTAACCTTC         TTTTTATATCCAACC 100 35
         map 5145061 .. 5145089 + -11.2  -6.20267   TCTAATATAAAAAAA        CGGTTGTTTTAT TCCAC ATAAAACAGCCG        TTTTTTTATTTTTGG 100 36
 JI729_26345 5154393 .. 5154422 + -12.4  -5.60993   TTAATAATTTTTTCA       CATCCAATCAAT CTCTCA ATTGATTGGATG        TTTTTTTATACAAAA 100 37
 JI729_26350 5156283 .. 5156305 + -13.6  -4.63218   CTTAATCATTTAAAA           TACCACTGAT TTT ATCAGTGGTA           TTTTATTGAGAAAAA 100 36
 JI729_26355 5156799 .. 5156816 +  -5.5  -5.10033   TATTCAATAGAAAAG             AGGTCCT TTAT AGGACCC              TTTTATTTCTCTTCC  79 31
 JI729_26385 5161870 .. 5161904 + -12.3  -5.41787   CACTATTTTAACGCA     CTAAAAAAGGAGCGA ATGAG TCGCTCCTTTTATGG     TTTTTCTATTTTTTC 100 22
 JI729_26395 5163538 .. 5163566 + -10.4  -5.48063   GGTTGCATAAAAAAA        GAGCTATTCCCA TCGTT TGAGAATAGCTC        TTTTTTGTGTTGCAT 100 31
 JI729_26420 5168411 .. 5168433 +  -7.7  -5.79595   AGCACGTGCCTTTGA           GCTCCTTTC TTAAT GGAAGGGGC           TTTTTTATTTTCGAA 100 13
 JI729_26425 5170582 .. 5170605 + -15.4   -5.5074   TCCTTGGTAAAAAAA          TAGCTGACGG GCAT CCGTCAGCTA           TTTTTTATTCACTTA 100 31
 JI729_26440 5172133 .. 5172159 + -13.9  -4.59982   TTTCAAGTTTTTTCA         TAAGAAGCAGC CATTA GCTGCTTCTTA         TTTCTTTCCTTCTAA 100 41
 JI729_26475 5179138 .. 5179174 + -15.5  -3.63805   TTAGAAAAAATTGCA    GAATAAAAAGGATGCAT GTA ATGCATCCTTTTTATTA    TTTCACCTATAAGCT 100 20
 JI729_26480 5180115 .. 5180147 + -22.3  -3.82098   CTTGGTTTAGAAAAA      TAAAGACCGTCGCTA TAA TAGCGACGGTCTTTA      TTTCAATTCATTATA 100 23
 JI729_26490 5182147 .. 5182163 + -10.9  -5.97979   TATAAATGGTGAAAA              GGAACGA AAT TCGTTCC              TTTTTTTATTCTTCT 100 36
 JI729_26495 5183615 .. 5183630 +  -6.8  -6.09196   TTTTTTAATAAAAAA              GCTGGC TCAC GCTAGC               TTTTTTTATTTTCCG  95 33
        cwlJ NONE
        gerQ 5184660 .. 5184685 + -10.5  -5.67967   ACTCCAAGACCATAA         AAAAAGCTGGC AAAT GCCAGCTTTTG          TTTTTTTATAATCCT 100 26
 JI729_26525 5187852 .. 5187879 +  -8.5  -3.63341   AAAATCAAACTTTAA        TCATTGGGGTT TTATTC ATCCCCAATGA         TTATTAACCAATATT  74 88
 JI729_26530 5188857 .. 5188885 + -13.4  -5.33026   TTTTCATTCACAAAA        CCTATTTGAAGT CAAAT ACTTCAAATAGG        TTTTTATTTAAATTC 100 43
 JI729_26535 5189344 .. 5189377 + -12.7  -3.59995   ACGAGCAACAATAAT     AAAAAGGTAGTTAAC GACT GTTAACTACCTTTTC      TATTTATAAATTTGG 100 27
 JI729_26565 5194547 .. 5194577 +   -20  -4.52142   ATTTTAAATAGAAAA       GAGCCTATTAAGCA AGC TGCTTAATAGGCTC       TTTCTGTTTTATGGT 100 2
 JI729_26585 5199980 .. 5200010 + -14.8   -5.7946   AAAAATTAATAAAAA       TAGGCAGTGGGGAT GAA AGCTCCACTGCCTA       TTTTTTTATTACACA 100 32
        yeiL 5201497 .. 5201526 + -10.2   -5.0538   TTAAAATATAAAAAA       GTAGCATTAACG TTTACC TGTTAATGCTAC        TTTTTTCGAGTGACG 100 30
        pdxK 5205587 .. 5205620 +  -3.2  -5.28826   TATATAAATAAAAAA     CACTCACAAAGTTCA TACAT TG-CCTCTGTGAGTG     TTTTTTATAAGCTTT  71 41
 JI729_26660 5216168 .. 5216197 + -13.9  -4.13591   AATTAATAAAGGCCA       TTAAGAGAATTCT AGAT AGAATTCTCTTAA        TTTATATACTATTCA 100 22
 JI729_26665 5217626 .. 5217655 + -12.2  -3.28712   AAAGTGAAACTTTAA       TCAACGGGGGTT TTGTTC ATCCCCCGTTGA        TTATCAGCCCCCACC 100 44
 JI729_26675 NONE
 JI729_26680 NONE
 JI729_26685 5221269 .. 5221296 + -10.1  -5.88565   AGCTAATATAAAAAA        CCTCTTAATTT TCGGAT AAATTAAGAGG         TTTTTTTATTCTCAA 100 54
 JI729_26690 NONE
 JI729_26695 5224103 .. 5224129 +  -7.5  -5.27769   GCTTAAAAGCAAAAA        GCTTTTCCTATT TAAA AAT-GGAAAAGC         TTTTTGCTTTTTTAT  86 35
 JI729_26700 5227087 .. 5227112 +  -9.1  -2.83164   GCACTCAATGAAACA         TGAAGCTATCT ATTT AGATAGCTTCC          TATAATAATACATAA  74 44
 JI729_26705 5228112 .. 5228135 +    -9   -5.9873   AGGCATAACCAAAAA          GTTACTTCTG TAGG TAGAAGTAAC           TTTTTTTTATACTAA 100 33
 JI729_26710 5229819 .. 5229859 + -15.2  -5.08088   ATAGTAAATAGTCTT TAAG-AAAAAACTCCTTGT GTAG ACAAGGAGTTTTTTACTTA  TTTTTATTAAGAATT 100 30
 JI729_26720 5234006 .. 5234028 + -12.1  -5.63517   CAAAATAATAAAAAA           TAACCTCGC TAACT GCGAGGTTA           TTTTTTATTTCCAAA 100 33
 JI729_26755 5241855 .. 5241898 + -24.3  -5.59962   AAGTATTAGATTAAA CGTAAAAGAGGAAGCATCT CATTTA AGATGCTTCCTCTTTTACG TTTTTATTTATTTTG 100 27
        sodA 5245809 .. 5245831 +   -12  -4.10331   CGAAATCCTCCAGAA           TCCCCCGG ATTGCCA CCGGGGGA           TTTATGATTACTTCA 100 84
 JI729_26795 5250447 .. 5250494 + -14.6  -3.46824   TGATTTAAAAGAATC ATAAATAAAAAACTATCCACCT ATTA AAGTGGATAGTTTTTTATTTAC TTAATTGCTTCATGA 100 22
        guaC 5253413 .. 5253442 + -18.1   -5.4251   TTCTTAAATTAACTT       GAAGGACAAGCAT TTTC ATGCTTGTCCTTC        TTTTTTGTATATAAA 100 41
 JI729_26815 5254174 .. 5254198 + -10.8  -4.04326   ATCAAGTATAAAAAA          TAAGCCCTCG CTTTA TGAGGGCTTA          TTTCATATTTACTTC 100 30
        yyaC 5276532 .. 5276563 +  -9.7   -5.2197   TCCGCATTAAAAAAA      GCAAACCATC-TAT AAATA ATAAGATGGTTTGC      TTTTTAATTTTTCTG 100 11
        rpmH 5285458 .. 5285479 - -13.1  -5.67967   ATTATTAGAAAAAAA           GACCACTGA ACGA TCAGTGGTC            TACGCAGATAATACT 100 25
        rnpA NONE
     SpoIIIJ 5284234 .. 5284247 -  -2.4  -2.94695   TTAGCAGTAATTACA               CTCA CTTGCT TGAG                CCTCCAGCTTTGCTA  41 13
 JI729_26980 5283527 .. 5283559 - -13.7  -5.08824   TCCCCATGTAAAAAA      CACTAAACTTATTCA CAG TGGATAAGTTTAGTG      TTTTTTAGTTATCCA 100 87
        mnmE NONE
        mnmG NONE
        rsmG 5279281 .. 5279296 -  -6.2  -4.37886   CTATTCTCCATAAAA              TGTTTC CTAT GAAACA               TTTACGTTTTCATTT  74 70
         noc 5278323 .. 5278349 -  -8.1  -4.48903   GAAAATATAGTAAAA        GAGACCTC-TCC AATA GGATAAGGTCTC         TAGCACGTCATTATT  85 39
         soj NONE
       spo0J 5276532 .. 5276563 -  -9.7  -5.52384   TCCGCATTAAAAAAA      GCAAACCATC-TAT AAATA ATAAGATGGTTTGC      TTTTTAATTTTTCTG 100 29
 JI729_26940 NONE
 JI729_26935 5274557 .. 5274583 - -12.5  -5.72207   GCCAAACGAAAAAAA         GTAACAGTTAC CTACT GTAACTGTTAC         TCTCCCTCTATTCTT 100 33
        ychF 5273313 .. 5273341 - -14.1  -5.47431   CCAATACATAAAAAA        CTTGGCAAACATA TAA TATATTTGCCAAG        CTCATATCTTTATTT 100 59
        rpsF 5272856 .. 5272869 -  -5.3  -3.30731   CCAACGAGGATAACA               CGATT CATC AATCG                AACCACTCTCCCTTA  56 49
         ssb NONE
 JI729_26915 5272023 .. 5272072 - -18.3  -5.42198   TTTCAAAAAAGAAAA GCATAGCAAAATGCACAGTAGAGT CCG ACTCTACTGTGCATTTCA-TACGC TATTATTCACCAACA 100 28
 JI729_26910 5271005 .. 5271024 -  -2.2  -4.61873   TCCTATAAAGTAAAA            CTAACT CACCTTCC AGTTAG             TTAAACAGATTAAAA  58 60
 JI729_26905 NONE
        rplI NONE
        dnaB 5267129 .. 5267159 -  -4.9  -6.22802   TCTTATAAAAAAAAA       GAAACACATCT TATTATAAG AAATGTGTTTC       TTTTTTATACTGCCT  93 41
 JI729_26890 5265624 .. 5265659 - -13.6  -4.30995   TTTTTTATAAAAGAA    TAAGAAAAAACTCATG CGGA CATGAGTTTTTTCTAA     ACACTATTAATTAAG 100 36
 JI729_26885 5265425 .. 5265442 -  -3.3  -2.70932   GCGGTGTCTTAACCA             CTTGACC AACG GGCCACG              AAAAATAAAATGGTG  42 36
 JI729_26880 NONE
 JI729_26875 5265246 .. 5265258 -  -4.8  -4.65494   AAACTATATATAAAA                CCAC TAATG GTGG                TATAAACAAAAGTGG  68 38
 JI729_26870 5265123 .. 5265150 - -14.4  -5.42975   TTACATAAATAAAAA        GGATATTAAGTG GGCC CACTTAATATCC         TGAGAGTGGCTCGGG 100 30
        walR NONE
        walK NONE
 JI729_26855 NONE
 JI729_26850 NONE
 JI729_26845 NONE
 JI729_26840 5258148 .. 5258166 - -10.3  -4.73682   TTCTACAATAGAAAA             CAGGAGG TAGGC CCTCCTG             TTTTTAATACTTTTG 100 29
 JI729_26835 5257934 .. 5257950 -  -4.4  -2.90511   TATCCACAAATACTA              CCCACA TATTG TGTGAG              AATCTGTGTTCGATA  48 6
        rlmH 5257362 .. 5257372 -    -4  -4.06214   ATAATAAAATAAATA                 TGAT AAT ATCA                 GTGTTTTACATAGAA  59 45
 JI729_26825 5255207 .. 5255234 -  -4.9  -4.32048   TAATAATATTTAAAA        GACCATCGG TAATTTTTGT CCAATGGTC         TTTTTATCCTTTTAT  64 96
 JI729_26820 5254174 .. 5254198 - -10.1  -5.38249   ATCAAGTATAAAAAA          TAAGCCCTC GCTTTAT GAGGGCTTA          TTTCATATTTACTTC 100 34
 JI729_26800 5250445 .. 5250497 - -12.6  -4.22883   GATGATTTAAAAGAA TCA-TAAATAAAAAACTATCCACCT ATTA AAGTGGATAGTTTTTTATTTACTTA ATTGCTTCATGAACT 100 19
 JI729_26790 5249044 .. 5249069 - -11.3   -5.8187   CAGGTAATAAAAAAA         CGCCACATAAT AAAA ATTATGTGACG          TTTTTTTATTAAATT 100 34
        galE 5247820 .. 5247873 - -13.1  -4.49344   AAACTTAGTAGAAAA TGAATATA-AAAAATGACCTCTTGC TTTTAT GCAA-AGGTCATTTTTGTATATTCA CCATTAAACTTCTAG 100 29
 JI729_26780 5246780 .. 5246807 - -12.2  -5.10064   GCTAACATATAAAAA        GCATGGAATTCGT TTA ACGA-TTCCATGC        CTTTATACAGATAAT 100 44
 JI729_26775 5245809 .. 5245831 -   -12  -3.32294   CGAAATCCTCCAGAA           TCCCCCGG ATTGCCA CCGGGGGA           TTTATGATTACTTCA  95 33
 JI729_26765 5243669 .. 5243690 - -10.3  -5.24291   AAAAGCAAAACAAAA           GACCTTATA TTTC TATAAGGTC            TTCGAAACAGAAATT 100 171
 JI729_26760 5241855 .. 5241898 -   -25  -3.87318   AAGTATTAGATTAAA CGTAAAAGAGGAAGCATCTC ATTT AAGATGCTTCCTCTTTTACG TTTTTATTTATTTTG 100 33
        lytS NONE
 JI729_26745 5237735 .. 5237758 -  -9.6  -4.82128   GGATGAAATACAAAA          GCTGCTTCTT AAAT ACGAAGCAGC           TTCTTGAGTTCTTTT 100 10
        lrgA NONE
        lrgB 5236386 .. 5236424 - -11.9  -5.09762   ACTGTAACATAAAAA   GCAAGCTATCAGTAGAA ATCTG TCCTACAAATAGCTTGC   TTTTCTTGTTTTTTA 100 52
 JI729_26730 5235053 .. 5235081 - -17.7  -4.43859   CATAATGTTATAAAA        GAAAAAGCATCGA ACA TCGATGCTTTTTC        TTTACTTCACTTTAT 100 27
        msrB 5233991 .. 5234042 -  -7.7  -6.20267   TTAAAAAGAAAAAAA CAAAATAATAAAAAATAACCTCGC TAACT GCGAGGTTATTTTTTATT-TCCAA ACAAGACTAGAAAAT 100 9
 JI729_26715 5229829 .. 5229848 - -10.8   -5.4505   GTCTTTAAGAAAAAA            CTCCTTGT GTAG ACAAGGAG             TTTTTTACTTATTTT 100 43
 JI729_26670 5217797 .. 5217813 -  -9.5  -5.52384   CTTCCATCAAAAAAA              GAATCCA GAA TGGATTC              TTTTTATTTTCTGAA 100 29
 JI729_26655 5213540 .. 5213565 - -12.1  -5.15634   TACTGTACTAAAAAA         TAAAAGCTAAC AAAA GTTAGCTTTTA          TTTTTATCATTCAAT 100 32
 JI729_26650 NONE
 JI729_26645 5211591 .. 5211608 -  -7.7  -6.08342   GAACAAATAAAAAAA             GCAGCGA TATT TCGCTAC              TTTTTCGAACGCATT 100 22
 JI729_26640 5210085 .. 5210103 -  -9.6  -5.72118   AAAAAACAGAAAAAA             GGAAACCA CTT CGGTTTCC             TCTCCCCTTTTATCC 100 113
 JI729_26635 NONE
        cstA NONE
 JI729_26625 5206833 .. 5206860 - -11.4  -5.66989   GAAACAGCAAAAAAA        TAAAAAGGGCGA AAAC TCGCCCTTTTTC         ATTAACAACAGCGTG 100 27
 JI729_26620 5205587 .. 5205620 -  -5.4  -5.76237   TATATAAATAAAAAA     CACTCACAAAGTTCA TACAT TG-CCTCTGTGAGTG     TTTTTTATAAGCTTT  91 63
 JI729_26610 NONE
 JI729_26605 5202332 .. 5202352 -  -8.3  -5.60993   TTTTCCATAAAAAAA            GTCCACCTT CTA AAGGCGAAC            TTGGTCTTACGACTT  95 46
 JI729_26600 5201497 .. 5201526 -  -9.5  -5.63645   TTAAAATATAAAAAA       GTAGCATTAAC GTTTACCT GTTAATGCTAC        TTTTTTCGAGTGACG 100 54
 JI729_26590 5199980 .. 5200010 - -12.6  -5.30199   AAAAATTAATAAAAA       TAGGCAGTGGGGAT GAA AGCTCCACTGCCTA       TTTTTTTATTACACA 100 34
 JI729_26580 NONE
        metA NONE
 JI729_26570 5194547 .. 5194577 -   -20  -4.79451   ATTTTAAATAGAAAA       GAGCCTATTAAGCA AGC TGCTTAATAGGCTC       TTTCTGTTTTATGGT 100 49
 JI729_26560 5192848 .. 5192858 -  -3.2  -4.17491   ACGAAATTTTGAAAA                 GCGA TTT TCAC                 ACCTTCTCAATTATG  55 36
 JI729_26555 NONE
 JI729_26550 NONE
 JI729_26545 NONE
 JI729_26540 5189349 .. 5189372 - -12.6   -5.3798   CAACAATAATAAAAA          GGTAGTTAAC GACT GTTAACTACC           TTTTCTATTTATAAA 100 34
 JI729_26520 NONE
 JI729_26515 5185090 .. 5185100 -  -5.4  -3.41051   TTACCTTTATCATAA                 GCAA TTT TTGC                 ATATAAGCCAAACGA  57 49
 JI729_26510 5184665 .. 5184680 - -10.4  -5.70829   AAGACCATAAAAAAA              GCTGGC AAAT GCCAGC               TTTTGTTTTTTTATA 100 36
         pta 5180115 .. 5180147 - -22.3  -4.82901   CTTGGTTTAGAAAAA      TAAAGACCGTCGCTA TAA TAGCGACGGTCTTTA      TTTCAATTCATTATA 100 44
 JI729_26470 5177913 .. 5177935 -  -7.1    -5.252   TATGGGCATAAAAAA           GAAGAGTAA TCTTT TCACTCTTC           TTTTTCTTACTTATT  86 32
 JI729_26465 NONE
 JI729_26460 NONE
 JI729_26455 5174652 .. 5174707 - -10.7   -2.6563   GTTGTTAATAACCCA TTCTAACGGGCGTTCAACTTCCCAT TCATAT ATAAGAAGCTCAACGTCCATTAGAA GCCCCCTCTTTACAA  82 52
 JI729_26450 5173570 .. 5173593 -    -9  -5.98675   TATAAAAAGAAAAAA          TCACCTTTAC CGAA GTAAAAGTGA           TTTCCTTTATACATT 100 39
 JI729_26445 5172136 .. 5172156 - -11.9  -3.29461   CAAGTTTTTTCATAA            GAAGCAGCC ATT AGCTGCTTC            TTATTTCTTTCCTTC  95 26
 JI729_26435 5171154 .. 5171166 -  -3.3  -3.41907   TAAAAATTATAAAAG                GCCAA AAA TAGGC                GCAATGATGCTATCT  48 4
 JI729_26430 5170582 .. 5170605 - -15.4  -5.40072   TCCTTGGTAAAAAAA          TAGCTGACGG GCAT CCGTCAGCTA           TTTTTTATTCACTTA 100 30
 JI729_26415 NONE
 JI729_26410 5165962 .. 5165979 -  -9.9  -5.08483   TAAAAGGAAAGAAAA             CCCTTTC TTAA GAAAGGG              CTTTTGTCTCTATTT 100 15
        speE NONE
        speB 5163660 .. 5163707 - -19.5  -3.60525   CTTACCGACACATAA CGACAAAGTAAGAGCCCTCTA ATCATA TAGAGGGCTCTTACTTTATCT AGCTGCAGCGGCTAG 100 183
 JI729_26390 5161878 .. 5161896 - -10.3  -5.18357   TAACGCACTAAAAAA             GGAGCGA ATGAG TCGCTCC             TTTTATGGTTTTTCT 100 28
 JI729_26380 NONE
        argS 5158390 .. 5158415 -   -12   -4.9725   ATCTCCACATAAAAA         GGCAATCACA ACATCG TGTGATTGCC          TTTTATTTAAAAACG 100 187
 JI729_26370 NONE
 JI729_26365 NONE
 JI729_26360 5156800 .. 5156815 -    -9  -3.95375   ATTCAATAGAAAAGA              GGTCCT TTAT AGGACC               CTTTTATTTCTCTTC  82 29
 JI729_26335 NONE
 JI729_26330 NONE
 JI729_26325 NONE
 JI729_26320 5140693 .. 5140743 - -15.9  -3.61209   GTAATAGAAGTACAA TAATTATAAAAAGAAGGTTACCT CTCAT AGGTAACCTTCTTTTTATATCCA ACCCTTTTCTTCCGC 100 17
 JI729_26310 NONE
 JI729_26305 5137655 .. 5137677 - -12.1    -5.626   TACTCCATAAAAAAA           CAACCGTCT AAGTA AGACGGTTG           TTTTTTAGAACTCAA 100 30
 JI729_26285 NONE
 JI729_26280 NONE
 JI729_26275 5127940 .. 5127952 -  -5.5  -3.57792   GCATTTATTCGTAAA                CGTAG AAT CCACG                ACCTGTTTTACGCCC  62 2
 JI729_26270 NONE
        acdA 5125536 .. 5125555 -  -9.3   -4.8622   TTTTGGAAGGAAAAA            GCGTAGG AAAATA CCTACGC             TTTCGTTCCTACTTC 100 34
 JI729_26260 5124712 .. 5124723 -  -3.6  -3.06341   AATATTGCTTAAAAT                CCAC TTAT GCGG                 CACTTCCTTTCATCA  47 172
        rpoE 5124049 .. 5124097 - -10.7  -6.07374   ACAAAAAACAAAAAA GAAAATTGCTCCC--CTCATCAC AAAAA GTAATAAGTAGGGAGCAATTTTC TTTTATATTTACACT 100 113
        pyrG 5122294 .. 5122311 -  -8.4  -5.94597   GAATATTAAAAAAAA             GCGCCT TATTTC AGGCGC              TTTTTTTATTACTTG 100 34
       spo0F 5121059 .. 5121074 -  -4.8  -4.37734   CAGAATAAGGTAAAA              TATGTA TATA TACATA               CCGGACTTTTTTCTA  67 144
 JI729_26235 5120078 .. 5120107 - -15.9  -4.05245   CATTATACAACGAAA       GGAAACCGTCTAA AAGA CTAGACGGTTTCC        AAAACGGAATTTTAT 100 43
        murA 5118453 .. 5118503 - -13.5  -3.85698   GTGTTTTTCTATAAA GTG-TACTTCCGCAAGTAGTGATGC TTC GCTTC-CCCCTTGCGGAAGTATCAC TTATGCGTTCTTCAT 100 26
        glpX 5117257 .. 5117298 -   -14  -4.19177   ACGTTGGAACACAAA TACAAGAAGCGAAGACAA GAAAAT TTGTCTTCGCTTCTTATT  TAATTTAGTTCCAGC 100 149
         rho 5115788 .. 5115811 - -10.4  -5.38321   AAACAGCATAAAAAA          CTCGCTTACT ATAA AATAAGCGAG           TCCTGATTTTTCCCT 100 41
 JI729_26215 5114893 .. 5114920 -    -7  -5.75342   TTTTCGCAAAAAAAA        CAGACAAGCGAA TACA TACACTTGCCTG         TTTTATGTTTTTATT  95 39
 JI729_26210 5114218 .. 5114235 -  -2.6  -5.42259   CTATTTTGAAAAAAA             CCCGCC TTGCGC AGCGAG              TTTTACTTATCTTTG  72 28
        prfA NONE
        prmC 5112035 .. 5112060 - -11.3  -5.60993   TTTTCCACAAAAAAA         TAGAGTAAGGT GTGA ACCTTACTCCA          TCTCTGCAAATACCA 100 18
      spoIIR 5111030 .. 5111067 - -13.7  -3.29263   ACACTTTCTTCATAA   TAAATCCCTCCTCATTT TTAT ATATGAAGAGGGATTTA    TTAATAGTACTATTT 100 35
 JI729_26190 5110536 .. 5110568 - -12.9  -4.46775   TATCCAAAAGACAAA      CAAGGTTTATCCACA AAA TGTGGATAAACCTAA      TTAATCCGTGGATAA 100 26
 JI729_26185 NONE
 JI729_26180 5108737 .. 5108750 -  -3.9  -2.72947   CATCGAGGATAGAAG               GTTAA AAAT TTAAC                ATACCATTCCAATAG  45 69
 JI729_26175 5108253 .. 5108284 - -14.6  -3.42395   CCCATCACTCAAATA      TAAAATCCCCTGCT TTTT AGCAGGGGATTTTC       TCATTGTAATTCTTC 100 26
 JI729_26160 5105889 .. 5105922 -  -9.7  -5.12971   AACATGCAACAAAAA     TAAGGAATCCATTTC ATAC GAAACGGATTCCTCT      TATATTGCACTTATT 100 36
 JI729_26155 5105231 .. 5105245 -    -5   -3.0464   AAGTGATCTCCAATA               TCGTAT TAT ACACGA               AACATCAACCTACTG  53 30
        rpiB NONE
 JI729_26145 5103956 .. 5103998 - -19.6  -2.62616   TGACTTTCTATATCA TAAAAGAAAAAAAAGACCGA AAA TCGGTCTTTTCTTTCTTCTA TTATAAAGTCAGACA 100 97
        glyA 5102533 .. 5102562 -  -8.6    -5.252   TATGTCCACAAAAAA       GACCGCCAAAAC AATTAA GTCTCGGCAGTC        TTCTTCAATCTATTA 100 38
         upp 5101637 .. 5101665 - -18.9  -5.55769   GCTTACAACAAAAAA        GACGAGCTGGGGA ATC TCCCCTGCTCGTC        AGTTGTCTTACTTCG 100 33
 JI729_26130 NONE
 JI729_26125 NONE
 JI729_26120 NONE
        atpB NONE
        atpE 5099480 .. 5099513 - -11.1  -3.61988   TCATTCATAAAGCAA     TGGCGAAGAAAGTTC GGAA AAACACTCTTCGCCA      TCTATGTAAGGGGAG  90 47
        atpF NONE
        atpH NONE
 JI729_26095 5096720 .. 5096749 - -14.5  -3.09516   TTGCTCATGATTGAA       GGAAAAGAATAGG TGCA CCTACTCTTTTCC        TTTACATAACCGTCA 100 116
        atpG 5095625 .. 5095635 -  -2.4  -2.87344   GACTCTTTTGACAGA                 GCCG CTT CCGC                 TTTTTATTGAATCTA  40 157
        atpD NONE
        atpC 5093667 .. 5093691 - -15.1  -6.08563   AATACACAAAAAAAA          TCCGTAAAGGC AAA GCCCTTACGGA          TTTTTTTACTTCATA 100 31
 JI729_26075 5092749 .. 5092759 -  -2.6  -3.58726   GCCTCCTATACACAA                 TAAT TCT ATTA                 GTATAGCATGTTCCT  48 39
 JI729_26070 5092036 .. 5092068 -   -15  -5.24531   AGTTTCTACAAAAAA      CCCCCAGTATGAAC AAATA ATTCATACCGGGGG      TTTTTTAGTGCTAAA 100 36
        nuoA NONE
        nuoB NONE
 JI729_26050 NONE
        nuoD NONE
        nuoH NONE
        nuoI NONE
 JI729_26030 NONE
        nuoK NONE
        nuoL NONE
 JI729_26015 NONE
        nuoN 5078529 .. 5078562 -  -8.3   -4.7033   CAAGTTAACACAAAA     TAAAAAGCGCAGAGT ACTG ACTCCACACCTTTTA      TTTTCACTATTGTAC  87 32
 JI729_26005 NONE
 JI729_26000 NONE
        murA 5075994 .. 5076023 - -12.3  -5.87688   ATAACCCAAAAAAAA       TAGCCCCTATGTC AAAA GACATAGAGACTA        TTTCAATTAAGCGTG 100 32
      spoIID 5074782 .. 5074805 -  -9.6  -5.71712   TTTTACATAAAAAAA          TAGGCGCCAG AGTT CTGACACCTA           TTTCTTCACCATCAG 100 23
 JI729_25985 5073637 .. 5073661 -  -8.7   -3.7331   AGGCGCATTAAAATA          CCGGTAAAA GGAGTAT TTTTACCGG          TGAATGAATCGCATG  80 61
 JI729_25980 NONE
 JI729_25975 5071945 .. 5071963 -    -6  -6.07374   AGAAAAAAGAAAAAA             CTGAGC ACTTTTG GCTCAG             TTTTTAGTCTAATTG  93 29
 JI729_25970 5070851 .. 5070898 - -12.5  -2.88861   GAGTATTTTTATATA GAAA-TAAAAAAATCAGCTCTC CTAGT GAGAACTGATTTTTTCACTTTC TTATTCTTGTGAAGA 100 26
 JI729_25965 5070602 .. 5070625 -  -9.7  -5.83822   TATAGCGAAAAAAAA          TGACACCTT GTATAA AAGGTGTCA           TTCTTCTCGTTCCAA 100 23
     spoIIID 5069911 .. 5069925 -  -6.4   -4.2349   CCTCGATATTCAAAA               TCAGGT TAC ACCCGA               ATTCTTTTCACCTAA  72 142
 JI729_25955 5068849 .. 5068872 -   -14  -5.56112   ATAAAAACGAAAAAA          GAACTAAGGC ATTA GCCTTAGTTC           TTTCAAATTATCTCA 100 33
        fabZ 5067966 .. 5068015 - -19.1  -2.69468   CATCGTTATATAGCA GAAAATAAGAAAATCTCCTTGTA TTTT CACAAGGAGATTTTCTTATTTTT CTCTATTCTTTTTTA 100 28
 JI729_25945 5066963 .. 5066982 - -10.8  -5.86976   TCAGAAAACAAAAAA            GCCAACAA ATTT TTGTTGGC             TTTTCCATATTTCAG 100 37
 JI729_25940 NONE
 JI729_25935 5065218 .. 5065271 - -14.2  -3.85698   CCTCTCTCCTATAAA GATCTTTTTTCCCTTGAATATGAG ATATTG CTCATATTCAAGGGAAAAAAGGAG ATATGTTTTTATCAT 100 55
 JI729_25930 5064219 .. 5064276 - -13.1  -3.18383   ATTTGTATGTAGCAA TAACAAAAACCCTACTTATAGGGTCGT CTTT ACAACTCCATAAGTAGAGTTTCTATCA TAAATAAATTATGGG 100 171
        galU NONE
 JI729_25920 NONE
 JI729_25915 5061270 .. 5061282 -  -3.5  -3.33798   ATTTGTATAAAGATA                TTATT TAG AATAA                AAACGCTAAAAAATC  49 287
 JI729_25910 NONE
 JI729_25905 5058802 .. 5058818 -  -4.5  -2.54059   TACAGACATTAATAC              TGAATAT TGC ATACTCA              CTCTCCTTTCTTATT  49 23
 JI729_25900 5057910 .. 5057923 -  -2.5  -3.32819   CATATATCGTTATAA               TTTAT CCAA ATAAA                AAAGGTATTACACTT  45 85
 JI729_25895 NONE
 JI729_25890 NONE
 JI729_25885 5054391 .. 5054415 - -17.3  -4.89063   CCATGCAAAAATAAA          CCCAACTCCTT CCA AAGGAGTTGGG          TTATTACATATTACT 100 36
 JI729_25880 5053449 .. 5053484 -  -8.6  -5.54885   AATATTAATAAAAAA    GAAAATCATTTATCTT TTAT AAAACAAATGATTTCC     TCCTCACAGATTTTA 100 38
        galE 5052290 .. 5052309 -  -9.4  -4.91109   CTCTTATTATAAAAA            GTATACGA TTGC TCGTATAC             CTTTTGTGTACCTTT 100 114
        galE 5051187 .. 5051228 - -15.4  -5.63504   AATTCTATAAAAAAA GAGAGGGTATTGTCGAACA TATTT TGT-CGACGATACCCTCTC TTTCACTTATTATAT 100 41
 JI729_25865 NONE
 JI729_25860 NONE
 JI729_25855 NONE
 JI729_25850 NONE
 JI729_25845 5045727 .. 5045766 - -10.3  -5.27335   TTTCCTAAATAAAAA  TATAAAAGCTATCCAAT ATAAAA ATTGGATAGCTTTTTCA   AATAAAATATTATGC 100 35
 JI729_25830 NONE
 JI729_25825 NONE
 JI729_25820 5041416 .. 5041474 - -23.3   -2.7094   TTCTATTTATATAAC CCGTTCTAACGGGCGGTTCACTTCCTC ATATA GAGGCTACGAACCGCCCACTAGAACGG TAATTTGTAGTTCTA 100 53
 JI729_25815 5040522 .. 5040566 - -10.3  -4.16351   AGATTTCAAAAAATA TTAAACAACCTTAGTCCTATT GAA ATTAGAACTAAGGCTACTTAA TGAAAAGATACCTAA  95 170
 JI729_25790 5035424 .. 5035468 - -16.9  -3.66018   TCATCACCTTAATAA CAAATAGAATGGAAGGT-AG TATTTC CTCACCTTCCATTCTATTTG CTATTTTTATCCTTT 100 32
 JI729_25780 5034343 .. 5034372 - -15.2   -5.1417   CTATAAAATGAAAAA       GACGAATCTGCA TCATTT TGCAGATTCGTC        TTTTTTCTTCGGCAT 100 8
 JI729_25765 5033160 .. 5033186 - -15.3  -5.76949   TACCCGCAAAAAAAA         GCGCTAATCTC GAAAT GAGATTAGCGC         TTTTTTCTATTCCAA 100 19
 JI729_25750 NONE
 JI729_25745 NONE
 JI729_25740 5024962 .. 5024988 - -16.8  -5.28176   TTTAGCTACAAAAAA         GAAGCTGTTCAA ATA TTGAACAGCTTC         TCTCATATTAACGAG 100 33
        opuD 5021385 .. 5021405 -  -9.8  -5.53991   GAGGGATTAAAAAAA            GAGCTGAT ATAAA ATCAGCTC            TTTTCCTTCTATTAT 100 40
 JI729_25690 NONE
 JI729_25685 5009971 .. 5009997 - -22.4  -4.56775   ATGTTTGTTTAAAAA         GGGCCCCTTGCA ATT TGCAAGGGGCCC         TTTTCCTAATTCGTT 100 45
        lldP 5007436 .. 5007469 - -15.4  -5.46706   ATGCCAAAATAAAAA     GAGCCAGGTCCATA AAAAAA TAAGGACCTGGCTC      ATAAAGACATCATTA 100 227
        thiC 5005514 .. 5005555 -   -19  -4.06419   TCGCCTTATAAACAA CAGAAGCCCCATTTGCTA CCGTCT TAGCAAATGGGGCTTCTT  CTATAATAAAGTTAG 100 81
 JI729_25650 5000912 .. 5000930 -  -8.2  -5.24449   CATAAATTTAAAAAA             GACAATCC ACT AGATTGTC             TCCCCCATTTCTATC  93 36
 JI729_25645 4999732 .. 4999766 - -17.4   -4.3078   AATTATATCAACAAA     TAAAAGTTGCCACCCT CAT ATGGTGGCAACTTTTA     TTGTTCACTCTTTTT 100 23
 JI729_25635 4996661 .. 4996689 - -14.8  -5.67283   AACGCAAATAAAAAA        TAAGCTATCCGA AAAAA TCGGATAGCTTA        TTTCATTTTAAGAAA 100 33
 JI729_25615 NONE
        celB NONE
 JI729_25605 4991527 .. 4991542 -    -9  -5.96894   AGTGAAATAAAAAAA              CCTTGC ATAA GCAAGG               TTCATTCATCCACCG 100 27
 JI729_25600 NONE
        celB 4989525 .. 4989566 - -11.2  -3.07431   GAACATGATATAAAG GTAATTGTTCTCACAG GTATCGTTGT CTATGAGAACAATTAC  TATATTACATAGGTA  91 30
 JI729_25590 NONE
        celF 4987715 .. 4987733 -  -6.7  -5.94214   AATAGAATAAAAAAA            GCGG-GCT AAAT AGCGCCGC             TTTTACTTCTCTACC  95 28
        chbG 4986952 .. 4986973 -  -8.7  -5.72622   TTTATAAATAAAAAA           CGACGGC ATGATGTA GCCGTCG            TTTTTCTATTAAAAC 100 34
 JI729_25570 4985124 .. 4985157 - -13.4  -2.89298   CACCTTATATAATGA     GAAAAGGCTGTTCCA ACATA TGGA-CAGCCTTTTC     CTCTATTTCTTTACT 100 28
 JI729_25550 NONE
        wecB 4977104 .. 4977126 - -13.5  -5.07486   CAGCCGTAACAAAAA           GGCCCAATC TATGC GATTGGGCC           CTTTTTATTTACTTA 100 34
 JI729_25530 4974145 .. 4974161 -  -7.3  -5.42862   ATACCCGTAAAAAAA              CCCTCTT AAA AAGAGAG              CTTTTATATCTTTAT  90 40
 JI729_25525 4973641 .. 4973658 -  -9.9  -5.85425   TAAACAAAGAAAAAA             CGTAAGG AATT CCTTACG              TTTTATTAAATATAC 100 57
 JI729_25520 4972029 .. 4972064 -  -7.8  -5.30575   TAAAAACTCAAAAAA    GCCGATAACCTACTTAT AAA AT-AGTAAGCTATCGAC    TTTATACACATGTTT  90 57
 JI729_25515 NONE
 JI729_25510 4969820 .. 4969831 -  -7.2  -3.25166   TCACTCTAAAAATCA                GGGC ATTC GCCC                 CATATTTTGACTATA  66 109
        cspC 4969513 .. 4969533 -  -5.4  -5.19328   ATCCTATAACAAAAA            CCCCTTGC GAAAA ACAAGAGG            TTCTACTATATATAA  79 83
        raiA 4968699 .. 4968719 - -14.7   -5.9667   AAAAATACAAAAAAA            GCGCAGCCA TTT CGGCTGCGC            TTTCGAATTATTATT 100 36
 JI729_25495 4967766 .. 4967812 -  -5.4  -4.26386   TTAAAAATGAAATAA CAGGAAAAGTCGTATAATCC GGATTTG AAACTATACGACTTTTTCTA GCACTATAAAATAAA  67 65
 JI729_25490 NONE
 JI729_25485 NONE
 JI729_25480 4965592 .. 4965606 -  -2.8  -5.95946   TTAAGAATAAAAAAA               CCATTA TCT TGATGG               AATCTCGAAACCTTA  85 86
 JI729_25475 NONE
 JI729_25470 NONE
 JI729_25465 4963498 .. 4963536 -  -9.1  -2.80589   CAAAAAGCCGGAAAC  TTTGCAGGTGCA-GCATC CATA GATACTTACACCTACAAA   AAAACTCCGACTTTA  74 109
        secA 4960516 .. 4960540 -  -8.6  -3.92716   TGAAAACAAGGGAAA          CTCTCTCCAC TTATT ACGGAGAGAG          TTTAATCCTTCTTAA  82 94
        prfB 4959244 .. 4959268 -  -8.7  -4.74801   TAATCCCATCAAAAA          GAGAAGTTG TCGTTTC CAACTTCTC          TTCCTCTTTACTTCA  91 123
        cccB 4958564 .. 4958587 -  -5.4  -4.90477   CAGAAAAAAGGAAAA          CGAGCTGACTA TAT TA-TCAACTCG          CCCATTTCACCTTTT  74 40
        ftsE NONE
        ftsX 4956673 .. 4956695 - -16.4  -4.25104   GGTGGTGTAGCAAAA           GGCATCACAC AGT GTGTGATGCC           TTTACCTATTTCTAC 100 78
 JI729_25435 4955164 .. 4955185 - -13.1  -5.80817   TTTAACACAAAAAAA           TACAGGCAG CAAA CTGCCTGTA            TTTCTTCTTATTTTG 100 33
 JI729_25430 4953867 .. 4953888 - -10.9  -6.04324   CCAAAAAACAAAAAA           GGTACCACC ACAA GGTGATACC            TTTCCTTCTATTACA 100 36
 JI729_25425 NONE
 JI729_25420 4951460 .. 4951499 -   -24  -2.89191   TGACACTTCGACATA  TAAAGTAAAAAGCCGTGC ATCA GCACGGCTTTTTACTTTA   TATGCGGACAGCAGT 100 23
 JI729_25395 4946414 .. 4946453 - -17.4  -3.57783   CTACTATAATCATAA  GAAAAAGCTGTCCCCAAA TACC TTCGGGAACAGCTTTCTC   CTCTACTACATAAAT 100 31
 JI729_25390 4945841 .. 4945854 -  -3.1  -3.01712   TCTTTGTTGCTAACA               CGC-TC GTT GATGCG               ATACTAATTAATAAA  44 117
 JI729_25385 4945542 .. 4945568 - -12.5  -5.44837   AAAAAAATACAAAAA         GCTGTTTATAC TCTTC GTATAAACAGC         TCTTACGGAAGTAAT 100 28
 JI729_25380 NONE
 JI729_25375 4944081 .. 4944104 -  -9.7  -5.21709   TGGTATACTAAAAAA          GCTACTTTC CTCTAC GAAAGTAGC           TTCTTTTTTCCTTTT 100 13
        uvrB NONE
        uvrA 4938907 .. 4938927 -  -3.9  -5.24796   CCTATACAATAAAAA            CCGAGCG TCATTTC CACCCGG            TTTTCATAAATAAAC  73 41
 JI729_25360 NONE
 JI729_25355 4937903 .. 4937925 -    -5  -5.90231   ATAAATAGAAAAAAA           CATTTCAT ACGAATA ATGAAATG           TTTTTCTTTTTGTCA  91 38
        hprK 4936823 .. 4936834 -    -3  -2.51225   TACAGAAGCTAACAG                CATA TGTA TATG                 ACCTCCCTCTCCAAA  42 43
 JI729_25345 4935982 .. 4936006 - -12.3  -4.08853   CTGAATATGAAAGAA          GCAGCATCTTA TAA TAAGATGCTAC          TTGTCTCTAATTTTC 100 32
        ppaX NONE
 JI729_25335 4934689 .. 4934699 -    -4  -4.32882   GTAAAAAACAAAACA                 GTAT ATT ATAC                 TCAATTATTTCCTTT  61 75
 JI729_25330 NONE
        trxB 4932008 .. 4932036 - -11.2  -5.71712   TTTCACATAAAAAAA       GAAGAAAGCT-CC TGTC GGTAGCTTTCTTC        TCACAAGGTATATTA 100 45
 JI729_25320 4931045 .. 4931074 - -13.7   -4.8083   GAATAGCATGAAAAA       TCCCCTTAACGAT TTTT ATCGCCAAGGGGA        TTAAAGCCCTTATTT 100 35
 JI729_25315 NONE
        rapZ NONE
 JI729_25305 4928454 .. 4928464 -  -5.4  -3.64703   TGTTTCTGATGCAAA                 TGAC ACA GTCA                 ACACCTCCTTATACG  59 109
        whiA NONE
 JI729_25295 4927212 .. 4927233 - -10.9  -5.92399   TAACAAAACAAAAAA           GCTATCGCA TATA CGCGATAGC            TTTTTATTGTACATA 100 29
 JI729_25250 4921818 .. 4921846 - -11.1  -5.47159   TGGAATAAATAAAAA        GCCCTAACCTACA AAA CGTAAGTTAGGAC        TTTTTGACGCGCCCA 100 33
 JI729_25235 NONE
 JI729_25230 4916098 .. 4916140 - -12.3  -5.46706   ATTCCAAAATAAAAA GAGCAGTTTAGGTATAGTGA AGCT TCACTATGCCT-AACTACTC TTTTATGATTTTTAT 100 257
 JI729_25225 NONE
 JI729_25220 4914099 .. 4914124 -  -2.6  -2.67047   GTTAAAAAAATAATC         CCTGCTAC GTGTATTATT GTAACAGG          AGATAGAAACTTATT  40 40
        cggR 4912980 .. 4912990 -  -6.8  -3.86202   GGGGATTATATTAAA                 GGGT AAA ACCC                 TTTGTTAACTGTTTT  69 10
         gap 4911884 .. 4911911 - -13.5  -4.21465   TTTAAAACGAAAGAA        GAGAGAGAGGG AACAAA CCCTCTCCCTC         GTTTTGTCATTGATA 100 58
 JI729_25205 NONE
 JI729_25200 NONE
        gpmI 4908306 .. 4908316 -  -2.6  -4.04174   TTTTATATAAGCAAA                 TTAT TTA ATAA                 TTGTTTTACCTGTCA  53 15
         eno 4906939 .. 4906962 - -15.4  -5.31275   TTTTAGCATAAAAAA          CAGACCGTGA TTTC TCACGGTCTG           TCGTTTATTTTCTAC 100 43
 JI729_25180 NONE
 JI729_25175 4904534 .. 4904558 -  -8.6  -4.55721   AAATTCTATAGAAAA          GCGAGAGC TATAGAGGC GCTCTCGC          TTTTCTTCTATTACA  89 36
        secG 4904198 .. 4904232 -  -7.3  -6.14618   GACAAAACAAAAAAA     GAAGAACCATTAGTA CCATT CACTAACGCTTCTTC     TTTCAATTCTATAAA  95 34
        estA 4903325 .. 4903357 -  -7.8  -5.52384   TCCTTATGAAAAAAA      GAGGCAACTAGATC TTACC AATCTAGTTGCTCC      AAGAAGTTATATACA  95 7
         rnr 4900727 .. 4900755 -  -9.6  -5.55001   GAAGAAAAAAGAAAA        CGGCCCCGCTTT TCATC AAAGCGAAGCCA        CTCTTTTCTTACTTA 100 34
        smpB 4900001 .. 4900011 -    -4  -3.53307   AACAACCTTACATAA                 GTTA TTA TAAC                 ATACGAGCTCCATTT  52 61
        ssrA 4899494 .. 4899530 - -16.1  -5.38054   TTCCATAAACAAAAA    GAACCATAACCTCGCCA ACC TGGCAAAATTATGGTTC    ATATCATACAAAATA 100 61
 JI729_25140 NONE
 JI729_25135 NONE
 JI729_25130 NONE
 JI729_25125 NONE
 JI729_25120 4894167 .. 4894195 -  -8.9  -5.38047   TAGTCACATAAAAAA        GCCGCTGCCTATA AAA TACAGACAGCAAC        TTCACCTAGAGTAGC 100 85
 JI729_25115 4892236 .. 4892255 - -13.6  -4.90266   GTGACCAAGTAAAAA            GCGCCCTA CTTA TAGGGCGC             TTGTTTTATACTTAA 100 37
 JI729_25105 4890285 .. 4890319 - -14.6  -2.63301   TACAGTTCCATATGA     GAAAAGAAAGGATAAG TAT CTTATCCTTTCTTTTT     TTCAATTGTCTTAAT 100 11
 JI729_25095 NONE
        psiE 4887800 .. 4887825 - -10.5  -5.64421   ATTGCAAATAAAAAA         GTAGTGTAGAC TTAT GTCTGCACTAC          TACTCTTTTCTCAAA 100 25
        speG 4886161 .. 4886190 - -19.5  -4.23853   AATAATATACACAAA       GGGCCATAGACAA AGCA TTGTCTATGGCCC        CTTAATCTATTTTAT 100 303
 JI729_25075 NONE
 JI729_25070 4883177 .. 4883215 - -15.1  -3.80452   AAATGACATTAACAA   TCAATAATTATTTATTG TTTAG CAATAAATAATTATTGA   CTAAACAAACAAAAA 100 94
 JI729_25065 4882815 .. 4882831 -  -3.7  -4.56153   CCATTATAAAAATAA              TGATTCA TCA TGATTCA              TCTCACTTATTCTTT  64 86
 JI729_25060 4882562 .. 4882579 - -11.3  -5.47159   GCGGAATATAAAAAA             GCGACTC TATT GAGTCGC              TTTTTTTCATAAGAA 100 32
 JI729_25045 4880357 .. 4880368 -  -2.2  -2.71011   AGTCCTCTTTAACCA                CTCC ATAT GAAG                 CCCCACCTTCTACTT  39 52
 JI729_25040 4878828 .. 4878846 -  -6.7  -5.26875   GTTTCAATGAAAAAA             GAGCACA TCACT CGTGCTC             TTTCTAAGCAATATT  84 39
 JI729_25035 4878209 .. 4878244 - -12.8   -3.2794   CTTTATTTACATCAA    CAAAAAGAGCACATCC CACA GAATGTGCTCTTTCTA     TACTCTTTATATTAC 100 37
 JI729_25030 4876624 .. 4876652 - -16.9  -5.93252   TTTAAAAACAAAAAA        GCCCCTATGTCTA CGA TAGACATAGGGAC        GATTATTCACCGTGT 100 330
        tyrS 4875151 .. 4875180 - -12.3  -3.30243   ACTGACTTTTTACAA       TAAAAGCTGTCCC GTTC GGAACAGCTCTTA        TTGTCGCTTTTTGTC 100 173
 JI729_25005 NONE
 JI729_25000 4870127 .. 4870144 -    -7  -5.64274   TTATGCACAAAAAAA             GAGTGC TTTTAC GCACTC              TTCTTTCTTACTTTA  90 44
 JI729_24995 4869107 .. 4869126 - -12.2  -5.03994   CCTCACATACAAAAA            GCATTGGC ATAC GCCAATGC             TTTTTCATTATCTCT 100 33
 JI729_24990 4864703 .. 4864729 - -16.8  -5.64873   CTGAATAATAAAAAA         GCTCGTAAAACA TAA TGTTTTACGAGC         TTTTTCTATTATTGT 100 34
 JI729_24980 4862288 .. 4862318 - -14.1  -5.58179   TACTACAACAAAAAA       GGCGAGCATCAAA TTTAC CTCGATGCTCGCC       TTTTCAATTACACTG 100 33
 JI729_24975 4860521 .. 4860547 - -16.8  -5.86976   GGATAAAACAAAAAA         TGAGCATCAAGT TTC ACTTGATGCTCA         CCTCATTATACTGCT 100 31
 JI729_24970 4858976 .. 4859000 - -11.5  -4.92783   AATTTACCATAAAAA          TAGCCCTAGCT ATG AGCTAGGACCA          TCCTTTTTCACCCCG 100 100
 JI729_24965 4857433 .. 4857470 - -15.9  -3.83816   ATAAAGCAAGTTAAA   CAAAAAAAGCAATGAGC CTAC GCTCATTGCTTTTCTTA    ATTTATTAAAGCATA 100 31
 JI729_24945 4854535 .. 4854565 - -14.2  -5.04222   TAACCAAATTAAAAA       CACATGCCGTCTTA AAT TAAAACGACATGTG       TTTCCGTATTTGCTA 100 38
 JI729_24940 4854161 .. 4854186 -  -8.3  -4.71463   AATCAAAATAATAAA         GGCATTCCAAA GTAA TACGGAATGCC          TCTTTTTATTGCCTT  87 31
 JI729_24920 NONE
 JI729_24915 4848858 .. 4848881 - -10.4   -4.2204   AATGCCAATAAAGAA          GGGATCTATG TCGA CATAAATCCC           TTTTTTCATAAATAT  95 64
 JI729_24910 4848269 .. 4848287 -  -5.4  -3.99986   TTAATAAAAGTCAAA             TACTTATT TTT AATAAGCA             TAAAAAGCACAGCGC  63 58
 JI729_24905 4847767 .. 4847780 -  -6.7  -2.63596   CTTCACCTCATACTA               TCTCG AATT CGAGA                TTTATTTTAAAATTT  60 45
 JI729_24900 4847012 .. 4847034 - -12.1  -5.63103   TTCCAATCAAAAAAA           GAGGACATC TATCG GATGTCCTC           TTTTCTATAAACCTT 100 41
 JI729_24895 4845207 .. 4845238 - -16.1  -3.88787   GGATAGCGGGATAAA      GAAAAGACCTGAC TAGGAT GTCAGGTCTTTTC       TCTTATTATTTTACA 100 31
 JI729_24870 4837792 .. 4837815 -  -9.7  -4.78237   TACTGCATAACAAAA          GACCTTTCA TTTACT TGAAAGGTC           TTTTTCTCTATCTCA 100 38
 JI729_24835 4831970 .. 4831989 -   -10  -5.95449   AAATAAAATAAAAAA            GGCAGTGC TTTT GCACTACC             TTCCTAAATTCTGAC 100 58
 JI729_24830 NONE
 JI729_24825 4830820 .. 4830843 -  -3.1  -2.69717   ATGGACAGAATTAAC          GCCA-CTGTC ATTGA GCCAGCTGGC          CTTCTTAAAATATCC  42 55
 JI729_24820 4829769 .. 4829799 -  -9.1  -5.43414   ATGACATATAAAAAA       GAGGATACCTCAC CCATC GTAAGATACCCTC       ACCTTCAACTGCTCA 100 4
 JI729_24815 4829355 .. 4829377 -  -8.5  -4.93296   GCATCACGATAAAAA           GAAGTTACC CTCAC GGCAACTTC           TTTTCCACATACCCT  90 189
 JI729_24805 4827834 .. 4827871 - -14.5  -4.21141   GGTTAATAAATTAAA   GGGCATAACATATTA TATATGAC TAATATGTTATGCCC    TTTGTTATTCAACTA 100 79
 JI729_24795 NONE
        yidC 4825522 .. 4825542 - -12.6  -5.65927   GATTCAAATAAAAAA            CACCGCTC GTAAT GAGCGGTG            TTTCTCTATGCTTTT 100 31
 JI729_24785 4824524 .. 4824555 -   -16  -4.39989   ATTAAATCATTAAAA      GGGACCGATTTCTG CTAA CAGAAATCGGTCCT       CTCACGTATCTTTCG 100 73
 JI729_24775 4822487 .. 4822509 - -16.4  -5.21709   TTTTACAGTAAAAAA           GGTAGGCGTA TAA TACGCCTACC           TTTTCATCATTCTGT 100 32
 JI729_24770 4821217 .. 4821238 -  -8.1  -6.02919   TTACAAATAAAAAAA           GAACCTATC AAAC GATAGATTC            TTCTTTCACGAACTG 100 11
 JI729_24765 4820950 .. 4820975 -    -7  -5.39905   ATTAAATAATAAAAA         GGAGTCT-AGT TTTTC ACTTAGACTCC         TTTTCGTTTTGTTCC  89 13
 JI729_24755 NONE
 JI729_24750 4817587 .. 4817603 - -12.3  -5.21709   TCCTATATGAAAAAA              GCAGCGA AAA TCGCTGC              TTTTCCTTATAATTT 100 32
 JI729_24745 4817207 .. 4817236 - -18.1   -4.4727   TTAATAGGCATAAAA       TAGGCATGTCGAA AATA TTCGACATGCCTA        TAAAATCCTTTATAT 100 105
 JI729_24740 4816062 .. 4816089 - -12.9  -4.45544   TTTCAGCAATTAAAA        TAACCAAGGAG TATTTT CTCCTTGGTTA         TTTTTTAACCATACC 100 23
 JI729_24725 NONE
 JI729_24720 NONE
 JI729_24715 4809009 .. 4809038 - -12.3  -6.06723   TTTTCCAAAAAAAAA       GAAAAGCAGCCGT TTAT ACGACTACTTTTC        TGTACAGCTATTAAA 100 36
 JI729_24710 NONE
 JI729_24705 4807595 .. 4807614 -  -9.4  -5.17353   ATATGCACTAAAAAA            CCTTAGAA TCAC TTCTAAGG             TTTTTGTTTGCCTCG 100 45
 JI729_24700 4806403 .. 4806435 - -15.9  -4.53303   CACGTGCATACAAAA      TAAAAGATGAATAGC TAA GCCATTCATCTTTTA      TACTGGTTATGTATT 100 46
 JI729_24695 NONE
 JI729_24690 NONE
 JI729_24685 NONE
 JI729_24680 4803575 .. 4803598 -   -11  -5.32882   TAGCATGACAAAAAA          GCAGACTGTG GCTT CTCAGTCTGC           TTTTATCTATTAGTA 100 55
 JI729_24670 4802219 .. 4802239 -  -6.1  -4.63089   TATTTTAAAAAATAA            GAAGCCTCT TTT ACAGGCTCC            TTCATCATCTATTCA  76 30
 JI729_24665 4801463 .. 4801475 -  -3.4   -4.7078   TTAATTATGTAAAAA                TACC TTATT GGTA                CTTTTTCCACACACT  64 17
        gcvH 4801007 .. 4801026 -  -9.3   -5.8901   ACACAAAATAAAAAA            GGACAGC ACAAAG GCTGTCC             TTTAGTCGACTATAA 100 41
 JI729_24655 NONE
 JI729_24650 4799740 .. 4799768 -  -7.6  -2.80244   TTTCCCAAGAAATAT       GTCGAGGCGGCAAA AAT TTTGCCGCCT--AC       TTTAATTCCGTATAT  66 22
 JI729_24645 4798976 .. 4799002 - -13.9  -6.01369   CAAACAATAAAAAAA         CCTTTCTGCTT TAGAG AAGCAGAAAGG         TTTATATGCGTATAT 100 291
 JI729_24640 NONE
 JI729_24635 NONE
        metQ 4796179 .. 4796196 -  -9.1  -5.28176   TGTAGTTATAAAAAA             GGCTGGC ATAC ACCAGCC              TTTTCAGCAATTATT 100 36
        metQ 4795298 .. 4795318 -  -6.1  -5.76237   TATATAAAGAAAAAA            GGACTGGTA ATT TTCCAATCC            TTTCCTTATAATTAT  95 37
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 4789827 .. 4789868 -   -14  -3.63991   CATCATGTCTAAGAA CCTTCCGCACGAGAAGATG AAAAG CATCTTCT-GTGCGAAAGA ACCTTAGCCAACGGG 100 68
 JI729_24595 NONE
 JI729_24590 4787431 .. 4787465 -    -8  -5.65177   ATACTCATAAAAAAA     CCTCCTTCTTATAT CATTTCT ATGCAAGAAGGAGG     GACGATATATGCTTA  95 38
        yunB 4786616 .. 4786641 -   -12  -3.29421   GCAAATACAAAACGA         TAACCGTAGC TGCATT GCTACGGTTA          TTTTTTATCCAGTAA  95 76
        lipA 4784520 .. 4784540 - -12.7  -5.40464   GAGTATAAACAAAAA            GAGAGCTAA TCG TTAGCTCTC            TTTTTTCATTATTTA 100 34
 JI729_24560 4782825 .. 4782846 - -11.7  -5.15634   TACCGGAGTAAAAAA           TAAACCACC GATT GGTGGTTTA            TTTTTTATGGATTGT 100 30
 JI729_24550 4781132 .. 4781166 - -23.2  -4.79223   TGATATGATTAAAAA     GTAAAACAGGTGGAGA AAA TCTCCACCTGTTTTAC     TTTTTATTTTTTATT 100 29
 JI729_24540 4780109 .. 4780130 - -11.7  -5.48787   AGAATATACAAAAAA           TCCTCTTAC AATC GTAAGAGGA            TTTTTTTATTTCTTC 100 31
 JI729_24520 4777338 .. 4777375 -   -13  -3.58726   CTTTCTCACATATAA   TATAAGATCCCCAAAA GGCATT CTCTGGGGATCTTATA    AGCATAATTATTCTG 100 33
 JI729_24515 4776642 .. 4776658 -  -6.6  -5.95539   TTCCAAAGAAAAAAA              CGCTTT ACCTA AAAGCG              CCCCATAACGTTCAT  95 37
 JI729_24510 4775765 .. 4775787 -   -15  -5.70829   AATATTAGAAAAAAA           GCTGTTCCAA AGT TTGGAACAGC           TTTCTTCATTACATC 100 34
 JI729_24480 NONE
        cotS 4767802 .. 4767819 -    -7  -5.24129   TTGTGGTATAAAAAA             GAGACC TCCATC GGTCTC              TTTTTTATACTTTTA  84 38
 JI729_24455 4766593 .. 4766614 -  -7.3   -5.7946   CCTCCAATAAAAAAA           GCCTTTGCA AATT CGCAAAGAC            TTCTTGTTTTATAAA  95 34
 JI729_24450 4765741 .. 4765764 -  -8.3  -5.80817   TTTAACATAAAAAAA          GACAATACA CCCCAC TGTATTGTC           CATTTTCTTCCCTAC 100 37
 JI729_24445 4764974 .. 4764996 - -12.8  -3.99275   CTACACAATACGAAA           GACGCCCTTT TCA AAAAGGCGTC           TTTTTATAGTTGAAA 100 29
 JI729_24440 NONE
 JI729_24435 4763380 .. 4763423 - -23.6  -5.14965   ATGTCTATGAAAAAA CTAGTAGAAAGCACAATGTA ATTT CACATTGTGCTTTCTACTAG TGCTTTATATTCCTC 100 5
 JI729_24420 NONE
 JI729_24415 4761462 .. 4761490 -  -2.5  -4.76041   TATATTCACTAAAAA        GGATGCATCAAAA TCA TTTTTATACATCT        TTTTTAGTGAATATA  62 76
 JI729_24410 4760409 .. 4760431 -   -10  -5.09762   CCCTAATAAACAAAA           GAAGAACCTT CGC AAGATTCTTC           TTTTCAAAATGAACG 100 49
        phnA 4759572 .. 4759592 - -12.6  -5.24796   GTGACATAATAAAAA            GAGGAGGC TATTC GCCTCCTC            TTCTATTTACTTATG 100 36
 JI729_24380 4755693 .. 4755709 -  -8.7   -5.4505   TTGTGTAAGAAAAAA              GCCCTTC TAA AAAGGGC              CTTTTTTTATTTATC 100 139
        dapF NONE
 JI729_24370 4754233 .. 4754270 - -10.1  -5.29885   AACGCAAAAAGAAAA   GACCTTTCTAACGAT TTTATTCC ATCGCTAAAAAGGTC    TTTCTCTATTTCTGC 100 48
 JI729_24365 4753005 .. 4753029 -  -8.7  -6.09196   TTGAAAACAAAAAAA          GGAATTGAC CCTGTTC GTCAATTCC          TTTTTATCTGTCTTA 100 38
 JI729_24355 4751325 .. 4751336 -  -5.8  -3.41602   TTTATGGTATTACAA                TCGC AATG GCGA                 TTGTACCGCTTATGG  59 279
 JI729_24340 4739078 .. 4739124 - -19.8  -3.31726   TCCTTTTATATAACA TAAAAGCACACTGAGTCCAATA AAC TATCGAACTCAGTGTGCTTTTC GTCTAAAAAATTATT 100 36
 JI729_24330 4736321 .. 4736347 -   -16  -5.27779   TTTAATATGAAAAAA         GCAGAAACAGCT CTT AGCCGTTTCTGC         TTTTTCTACTATATA 100 41
 JI729_24325 NONE
 JI729_24320 4735397 .. 4735421 - -10.9  -5.85178   AATATGCAAAAAAAA          TAATCTCCAAC TTA ATTGGAGATTA          AAACATTTGATATCC 100 23
 JI729_24315 4734683 .. 4734705 -  -7.1  -5.83226   AAGCCAAGAAAAAAA          GTCTAG-CGT AATT ACGACTAGAC           TATCTTTGATTTAAA  95 25
        pepA 4733013 .. 4733054 - -14.7  -3.29471   GGTCTACTATACCAA TAAAAAAAGGCTGCCTCAA AAAT TTGAGACAGCCTTTTCTTC  AAAAAATTATTCTTC 100 32
 JI729_24305 4732676 .. 4732686 -  -3.2   -4.2074   TTTCTAATAGACAAA                 GCTA CAA CAGC                 ATTACACGCTCATTA  57 73
 JI729_24300 4731571 .. 4731594 -  -8.3  -5.64421   ATTCCAAATAAAAAA          CGTTTAAGA CACTCC TCTTAAACG           TTTTAACAAACCCGA  95 50
 JI729_24295 NONE
 JI729_24290 NONE
 JI729_24285 4729417 .. 4729447 - -16.4  -4.97461   AAGAAATAGGAAAAA       GGGTACTTTAGACA TCC TATCTAAAGTACCC       TTTTATTAAAAATCT 100 47
 JI729_24275 4726529 .. 4726554 -   -12  -4.52857   ATTTCCTACATAAAA         CAAAAGGGAG ATTTCG CTCCCTTTTG          TTCCTTACTACTTAA 100 53
        galU 4725550 .. 4725579 - -15.3  -5.88565   TTCATAATAAAAAAA       TGAGTTATTTCAG TATA CTGAAATAACTCA        TTTTTTATTAAGACT 100 33
 JI729_24255 4723648 .. 4723670 -  -9.9  -5.24416   TAATTATAAGAAAAA          GAGGCTGCTC ATAA GAGC-GCCTC           TTTTTTATTTTTCAC 100 30
 JI729_24240 4720554 .. 4720574 - -11.1   -4.9218   TATGTAGTAGAAAAA            GCGCTCTGA TAA TCAGGGCGC            TTTTTTACTTATAGC 100 65
        kapD 4718275 .. 4718305 - -13.5  -5.42198   CTCTAAAAAACAAAA       CGACCAAATTACA TAATG TGCAATTTGGTCG       TTACTGTGTGCTCAC 100 26
 JI729_24220 NONE
        sodC 4716804 .. 4716837 -  -8.9  -4.29106   TTTCATAGTAAGAAA     GGAGTCTGTCC-CGAA TCA TTCTTGGGCAGACTCC     TTTGTCATATTTTGT  84 121
 JI729_24205 4715254 .. 4715276 - -15.6   -5.5208   GGATAATATAAAAAA           GGCTGTCGGA AAT CCCGACAGCC           TATAATGAACAGCTT 100 25
 JI729_24190 NONE
 JI729_24185 4711068 .. 4711082 -  -4.4  -3.07629   AGAGCAAAGCAGATA               TATTTA TTT TAAATA               TCCGATTGGTTAGTA  49 206
        yugI 4710633 .. 4710668 - -19.3  -4.29907   ATATCATAAGATAAA    GTAAAAGAGGAACGC TCATAT GCGTTCCTCTTTTAC     TTTGTTAACTCGGAC 100 22
 JI729_24170 4708661 .. 4708697 - -24.1   -4.3739   GACTTTTCGATAAAA    TAATAAAAAGCGACCGG AAT CCGGTCGCTTTTTATTA    TTTTAAACGCTCTTC 100 23
 JI729_24165 4707816 .. 4707826 -  -4.6  -4.19506   ATTTTAACTGCAAAA                 GGGC TCA ACCC                 AAACATTCACTGCAT  63 373
 JI729_24150 4704383 .. 4704400 -  -8.5  -2.94622   ACATACATTTATATA             TGAGAGA TAGT TCTCTCA              AAACTGAACAAAACG  69 88
 JI729_24145 4701321 .. 4701336 -  -6.2  -3.99324   TTTTATCATTATAAA              CATTTC TTTC GAAATG               TCAAGAAGAAATTTT  68 84
         rrf NONE
 JI729_24135 NONE
 JI729_24130 NONE
 JI729_24125 NONE
 JI729_24120 NONE
 JI729_24115 NONE
 JI729_24110 NONE
 JI729_24105 NONE
 JI729_24100 4700480 .. 4700494 -  -4.2  -3.06315   GGAATATCGGGAAGA               CAGGAT TTG AACCTG               CGACCCCCTGGTCCC  49 1
 JI729_24095 NONE
 JI729_24090 NONE
 JI729_24085 NONE
 JI729_24080 NONE
 JI729_24075 4699977 .. 4700000 -  -2.2  -2.86343   ATGTTAACCACTACA          CCACGGGACC ATTT GGTTGCGGGG           ACAGGATTTGAACCT  40 15
 JI729_24070 NONE
 JI729_24065 NONE
 JI729_24060 4699707 .. 4699723 -  -2.2  -3.15249   CAGATGCTCTACCAA              CTGAGC TAATG GCTCAT              TTTGAAAGTGGTGCC  42 34
 JI729_24055 NONE
 JI729_24050 NONE
 JI729_24045 NONE
 JI729_24040 NONE
 JI729_24035 4699308 .. 4699320 -  -3.3  -3.88232   TCTGGCAGAGAAGAA                GGGAT TCG AACCC                TCGCACCGCGTTCGC  54 0
 JI729_24030 4699187 .. 4699209 - -10.7  -5.60689   TTATACAACAAAAAA           GAGATAGCA GATTA TGCTATCTC           TTTTAGTATGACCCG 100 31
 JI729_24025 4697529 .. 4697561 - -12.2  -2.78746   ATCAAATTATATAAG      TTCAGAGGTAAGAA GCAGT TTCCCACCTCTGAA      TTATTTAGTAATTAT 100 40
 JI729_24015 4696204 .. 4696214 -    -4  -2.74563   TTTATACTTTAACTA                 TTTC TGC GAAA                 AACTGCAATATCCTT  47 291
        glgB NONE
        glgC NONE
        glgD 4692064 .. 4692081 -  -9.1  -2.78738   TTAAAACTTTAATCA             GTGGAGG AAGA CCCCCAC              TGATTCTTTTAAGAA  74 34
        glgA NONE
        glgP 4688023 .. 4688063 - -17.3   -4.4078   CTTTCTTAAGCAAAA  TAAATAAAACGAGCTTAAT TTT ATTAAGCACGTTTTATTTA  TTAATATCCATTTCT 100 82
 JI729_23970 4684968 .. 4684988 - -14.1  -6.44931   AAGAATAAAAAAAAA            GCATTCCGA AAA TCGGAATGC            TTTTTATCGCTAGCT 100 43
 JI729_23955 NONE
        menD NONE
        menH NONE
        menB 4677866 .. 4677890 - -12.3  -4.49556   CTTTCATGAAAGAAA          GAGACTTGATA TGA CATCAAGTCTC          TTAGTTGTTTTGTTT 100 264
 JI729_23935 4676042 .. 4676052 -    -4  -3.15579   TTAATCCGCTACCAA                 TATC TTT GATA                 ACTTCATCTACAATC  49 328
 JI729_23925 NONE
        menC 4673133 .. 4673152 - -10.8  -4.46656   TGTACAATACGAAAA            GGTTACTC GCGG GAGTAACC             TTAGTAAATGAAATT 100 200
 JI729_23915 NONE
 JI729_23910 NONE
 JI729_23905 4670302 .. 4670321 -  -7.8  -5.71712   TCTTATATAAAAAAA            GCTGTCCC AAAT GGCACAGC             CTTTTTCTTTATTCC 100 34
 JI729_23900 NONE
 JI729_23895 NONE
 JI729_23890 NONE
 JI729_23885 NONE
 JI729_23880 4665281 .. 4665296 -  -6.8    -5.626   TACTTTATAAAAAAA              GAGGGA ACAT CCCCTC               TTTTTATACGTCATA  90 29
        gntP 4663840 .. 4663857 -  -5.6  -5.52384   GCTTCATCAAAAAAA             GATACC AATTAA GGTATC              TTCTAAATAAACATA  88 28
 JI729_23870 4663442 .. 4663488 -  -9.1  -5.02502   CACAGCATATAAAAA TATGAATAAAATGGCCTTGTGCA TAT TGCACAAGGCCATTTT-CA-ATA GTTTTTAATAATTAG 100 37
 JI729_23835 NONE
 JI729_23830 4653684 .. 4653717 -  -4.7  -2.77595   TTAAAACGAAAAATT     TACTCAGTGAG CTTTTCATTATT CCCACTGAGTA      TTAAAATCTCTTAAC  50 79
 JI729_23825 NONE
 JI729_23820 4651305 .. 4651348 - -27.2  -4.09739   CTAACCTTTTCAAAA TAAAGAAGCTGCTCTTCCTT TTTA AAGGAAGAGCAGCTTCTTTA TTTTATACTTCTTCT 100 23
 JI729_23810 NONE
 JI729_23805 4647362 .. 4647386 - -15.1  -5.37865   TGAAGAATGAAAAAA          CAGCTACCGCT TAT AGCGATAGCTG          TTCCCTTATTATTTC 100 34
 JI729_23800 NONE
 JI729_23795 NONE
 JI729_23790 4645747 .. 4645775 -  -3.9  -5.63236   ACTTAAAAATAAAAA        GTCCGAAACTA TATAAAG TGATTTCGGAC        TTTTTATTTTTAAAA  81 35
 JI729_23785 NONE
 JI729_23780 4643921 .. 4643971 - -16.7  -4.08974   ATTTTAGGACATAAA TAG-TGATAAAAAAAGAGCTTGAA TAGT TTCAAGCTCTTTTTTTATCAACTC TCCTCAATATCATCC 100 19
 JI729_23770 NONE
 JI729_23765 4641500 .. 4641515 -    -9   -5.7946   TGTGTAATAAAAAAA              CGAGTG CTAG CACTCG               TTTTTTCTCTTCTAA 100 42
 JI729_23750 4639441 .. 4639462 -  -5.2  -6.08342   TAAGAAACAAAAAAA           CCTTCACT CTATAT AATGAAGG            TTTCTTACTTTTTAT  93 30
 JI729_23745 4638905 .. 4638923 -  -5.3  -6.23317   AGAAAAAGAAAAAAA             CATCGCA ATATG TACGATG             TTTTTTTCGGGTGTG  93 53
 JI729_23740 4638214 .. 4638232 -  -8.9  -4.62069   CCTCCATGCCAAAAA             TGGTAGG AGTAA CCTACCA             TTTTTAATATATGAA  89 73
 JI729_23735 4637569 .. 4637579 -    -4  -2.78467   TTCAGAAACTATAAT                 TTCA CTT TGAA                 TAACTGCCAGTTAAC  47 16
 JI729_23730 NONE
 JI729_23725 4634774 .. 4634792 -  -5.9  -5.80248   GAATACACAAAAAAA             GGGCGCT TAATG AGCGCTC             TTTTTTCATATCGTA  93 224
 JI729_23715 NONE
        feoB NONE
 JI729_23705 4631294 .. 4631339 - -14.5  -3.69386   GTAAAAATTAAAAAG TAAA-ACAAAAAAGCTTTGCGA AAT TCGCAAAGCTTTTTTCTATTTA TTATGAGCAACTTGT 100 19
 JI729_23695 4629600 .. 4629627 -    -7  -4.80729   AAATATAATAGAAAA        CCGACATGAATA TATT TAGACATGTCGG         TTCATTTGTCTCTAT  80 47
 JI729_23690 NONE
 JI729_23685 4628600 .. 4628626 -  -2.3  -3.17798   TTACAAACGATTTAA         TCATGGTAAAC AATCG GTTTGACATGA         TTACGCCCCCTTACG  42 36
 JI729_23680 4627521 .. 4627550 - -17.3  -4.53705   AATCGTTATATAAAA       GAGGGTATGCCAA AATT TTGGCACACCCTC        TGTTTATTATTAAGT 100 281
 JI729_23665 4624352 .. 4624390 - -14.3  -2.53012   AAGGGTATCACTAAG  GTA-AAAAAAGACACTTC GTTT GAAGTGTCTTTTTTATAC   GTATGATTTTCGATA 100 152
 JI729_23650 4621130 .. 4621184 - -12.5  -4.35518   AAGCGTATATTAAAA TGTCACCCTTTCCACCCGGG--AGGAT TTG ATCCTGTCCCAGATAAAAAGGATGACA AAGTAAATTCTTAAT 100 36
        luxS 4620333 .. 4620350 -  -4.8  -5.89921   AGCACAATAAAAAAA             CTGCCC TTTCAC AGGCAG              TTTTTCTTTTTATCC  91 35
 JI729_23615 NONE
       mutTA 4618112 .. 4618148 - -16.1  -5.76633   TTACATACAAAAAAA    GAAACCGGCTACTTTAC TTC GTAAAACAGCCGATTTC    TTCTATATGTTTCAT 100 2
 JI729_23595 4615946 .. 4615970 -  -8.7  -5.82172   ATCAACATAAAAAAA          CGCAAAGAATT AAA AATTCTTCACG          CTTTTCTTTAACGAA 100 65
 JI729_23590 4615513 .. 4615548 -    -7  -5.61881   TTGGAAAAAGAAAAA    GAAGCTGACTCAAAACA GTG CGCTAT-AGTCAGCTTC    TTTCTTTTACCTTTT  90 32
 JI729_23570 NONE
 JI729_23565 4612064 .. 4612103 - -25.4  -3.57128   ACTAATCAAGCATAA  TAAGAAAGAGGTCGTCCA CCGT TGGACGACCTCTTTCTTA   TTCCCCCACACTTTA 100 68
 JI729_23555 4608414 .. 4608437 - -11.2   -5.2112   AATACTATGAAAAAA          GAACTTGTAT CGTT ATACAAGTTC           TTTTTGTTTCTTTTA 100 38
 JI729_23540 NONE
 JI729_23535 4604147 .. 4604163 - -12.3    -5.626   CATTTCATAAAAAAA              GACCCGA GAT TCGGGTC              AACAAATAGAAATAT 100 216
 JI729_23525 4602273 .. 4602302 - -16.7  -5.86976   TTATAAAATAAAAAA       GGTGATTCCAAAA TACA TTTTGGAATCACC        TTTCCTTTACTATAT 100 35
 JI729_23520 4601077 .. 4601110 - -14.1  -6.20267   CCAAAAATAAAAAAA     TAGGAAAGCAGATCA TAGG TGATCTGTTTTCCTA      TTTTGATATAGGTTC 100 23
 JI729_23510 4599967 .. 4600007 -  -4.7  -3.18274   TTCATGTTAACTTAA  TGGAAGCGGAAACCTGCAT TTT ATGCAAAGTTACACTTCCT  GTTGTAATATCATCA  52 217
        metK 4596127 .. 4596174 - -13.9  -2.78891   ATTCCAACGTAATTA TAAAT-AAAAAAAGCTTTGCGC TCACC GCGCAAAGCTTTTTTTCATATA TTATAGACCAGCTTG 100 26
 JI729_23475 NONE
 JI729_23470 4593609 .. 4593631 -  -9.9  -5.19879   GCTTAAATAGAAAAA           CTCCCTTCA AAAAA CGAAGGGAG           TTTATTACATGGTCA 100 272
 JI729_23450 4590366 .. 4590383 -  -5.7  -2.67803   CCTCTATTAAATGTA             CAAATAA TGAT TTATTTG              TTTGTTTTTACTATA  54 19
 JI729_23445 4589246 .. 4589262 -    -8  -5.98781   CATAATGAAAAAAAA              CCACTC TACAT GAGTGG              TTTTCTTCATCACTG 100 35
 JI729_23420 NONE
 JI729_23415 4584657 .. 4584677 -    -9  -5.16132   TATAGCAAAATAAAA            CCAGGTCA TATTT CGACCTGG            TTTACTCTGATTGTT 100 27
 JI729_23410 4583476 .. 4583503 -  -6.3   -5.2291   AGATGACAATAAAAA        TAGGCTGTTTC GCGAAA GGAACAGCCCA         CTGATTAAAGTTTCA  82 43
 JI729_23405 NONE
 JI729_23400 4580492 .. 4580527 - -16.5  -4.07568   GTTTTTTTCTGAAAA    TAATAAAAACCGAGC GTTTTT GCTCGGTTTTTATTA     TTAATCTTCTTTCGG 100 26
 JI729_23395 NONE
 JI729_23390 NONE
 JI729_23385 4577811 .. 4577845 - -24.6  -4.73633   TAACAATATATAAAA     GGGTAGACTGCATGAA AAT TTCATGCAGTCTACCC     TTATTTTTACTATCC 100 35
 JI729_23380 4575944 .. 4575971 - -16.4  -5.63645   CCAAAATACAAAAAA        CCTCTCATCCCT AGAA AGGGACGAGAGG         TTGTAGATTCCCGCG 100 418
        leuS 4573446 .. 4573469 - -13.2  -5.36441   TTTCTATACAAAAAA          GCTCAGAGCA TAAA CGCTCTGAGC           TTTTTTAAATGATTT 100 39
 JI729_23365 4571890 .. 4571909 - -12.2  -5.48303   AGAAGCTGAAAAAAA            CTGCTAGG ATTT CCTAGCAG             TTTTTTATTATGGCT 100 57
 JI729_23335 4564886 .. 4564896 -  -2.6  -3.58726   CCTCCTTATATACAA                 TAAA ACC TTTA                 GTTTCTTTTTCACAA  48 421
 JI729_23325 4564521 .. 4564542 -  -8.1  -6.09196   TGCAAAAGAAAAAAA           CTTGAAACA GACT CGTTTCAAG            TTTTTTACAATTAAC 100 40
 JI729_23320 NONE
 JI729_23315 4563897 .. 4563918 - -11.7  -5.29445   TTTGAATAATAAAAA           CTCCCTTAA TTTC TTAAGGGAG            TCCTGCAATTGAATC 100 17
 JI729_23310 4559847 .. 4559870 -  -6.7  -5.90231   ACAAAGATAAAAAAA          CCTTGAAGC ATAAAA GCCCCAAGG           TTTTCTTCTTATTAA  95 37
        moaA NONE
 JI729_23300 4557292 .. 4557312 -  -9.7  -3.54741   TAGCAGTTGCGCAAA            TCGCAGGCA TTA TGGCTGCGA            AACGAACTTCTGATA  80 350
        moeA NONE
        mobB NONE
        moaE NONE
        moaD 4554517 .. 4554541 - -10.8  -5.61596   ACTGCCATAAAAAAA          CGACTTTCCC TATGT AGGAAAGTCG          TTTTAATGAATCCAA 100 43
 JI729_23270 4554046 .. 4554067 - -10.3  -2.70543   AAATGCCATAGATTA           TCACTCTAA GTCG TTAGAGTGA            GCTTTTATTTTTTCT  78 4
        glcU NONE
 JI729_23260 4552320 .. 4552344 -   -13  -5.00616   TTTTTTTGTAAAAAA          GGACAAAGAG ATAAA CTCTTTGTCC          TTTTCATATTACCCA 100 34
 JI729_23250 4551161 .. 4551179 -  -2.4  -2.65504   CTTTCATCAAAAACT             TTCACACG AAT CATGTTAA             CACCATCCTAGATCG  39 22
 JI729_23245 4550955 .. 4551001 - -22.1  -3.01924   CATGTTGTCCCAACA TAAAACATAAAAAAGAGCTGG GTGAG CCAGCTCTTTTTTATGCTTTA TAAACGATCATTGCT 100 16
 JI729_23235 NONE
 JI729_23230 4549523 .. 4549547 - -15.1  -4.48713   GTGAGCAATAATAAA          GAGGATGACCA TTT CGGTCATCCTC          TTTTTACTCTTCATT 100 29
 JI729_23215 4544631 .. 4544648 -  -9.1   -3.3393   TTTATCATAGAAAAG             GGGACGT AATT ACGCCCC              TCTTGATTTCAACTT  78 17
 JI729_23210 4543820 .. 4543848 - -13.3  -3.49486   ATGTAAATAAATACA        TACCCCTTTCTAA TAA TTAGAAAGGGGTC        TTTTCTGCGCCTATA 100 47
        pepV 4541763 .. 4541787 - -10.7  -4.44608   TTCAGGTAAAAAGAA          GCCGCTCTCCA AAA TAGAGAGCGGA          CATTATTTATATATC 100 43
        thpR 4540976 .. 4540990 -  -5.8  -4.35524   TTCTCAAAGTTAAAA               TAAAGT GAA ACTTTA               ATGAGCGAGAAAATT  70 191
        pulA 4538621 .. 4538646 -  -4.7  -5.50723   TTATGAAAAGAAAAA         CCGCAACATTT CTAC ACATGTTGTGG          ATTCATATATTTTAC  85 182
 JI729_23185 4537344 .. 4537365 -  -4.4  -5.68438   CTACCAAACAAAAAA           CCAAGTAC GTACGA GCACTCGG            TCCGTTTCTTTCAAG  88 438
        trmB 4536601 .. 4536620 - -10.8  -5.76633   TTAGATACAAAAAAA            CCTATGCA TTAC TGCATAGG             TTCTGTACGATATTT 100 14
 JI729_23170 4535644 .. 4535677 -  -6.8  -5.55769   CCCGACAATAAAAAA     GAGGCTGCTCCA ATAAATATGA TGGAACAACCTC      CTATTTTTATGCTTC  90 32
 JI729_23160 4533928 .. 4533946 -    -6  -5.53288   TTCAACCTAAAAAAA             GAAGGG TTTTTCG CCCTTC             TTCTCTACGCGTTAT  88 30
 JI729_23155 4533135 .. 4533158 -    -3  -2.62184   CTTTCTTTTATACTA          CCATACATCG CGCA CGGTGCAAGG           TTTATGCTTGCTTTT  42 27
 JI729_23150 4532710 .. 4532736 -  -2.9  -5.40072   TCCCTTCCAAAAAAA         TAACCTCCCCC GCGAA GGTAGAGGTTG         TTTTACAATTCAATT  72 52
 JI729_23145 NONE
 JI729_23140 4531211 .. 4531254 - -21.4  -3.07537   ACCGACAAAGAATGA CAAAAAAAGAGAGGTTGTCC AAAA GGACAACCTCTCTTTTCTTA TATCAATTAAAATTT 100 32
 JI729_23135 NONE
 JI729_23130 4529589 .. 4529612 - -11.1  -5.71712   TTTCATATAAAAAAA          CGCAGTCTT TCATGT AAGACTGCG           CTTAAGCTTTACTCT 100 27
 JI729_23125 NONE
 JI729_23120 4524515 .. 4524554 -   -11  -3.45849   GCTATACTATGATAA  CAGAAAAACTGATAGG GTCAATCA CCTATCAGTTTTTCTC   TCTTTTACATCTCTT  87 30
        murC 4522967 .. 4522989 - -16.4  -5.40625   ATAGCACACAAAAAA           GACGCATAGC CAA GCTATGCGTC           TTTCCTATTACTTCT 100 33
 JI729_23110 NONE
 JI729_23105 4521794 .. 4521811 -  -6.3  -4.96848   TGCTTCATAGAAAAA             GGCCATT TCTA AATGACC              TTTTACACAATGTAC  80 28
 JI729_23100 4521307 .. 4521328 -  -8.7  -5.40014   AAATAATAATAAAAA           CGCTCGG AATTTTCG CCGAGCG            TTTTTTATTTCTTCC 100 30
 JI729_23090 NONE
        ytxJ 4519128 .. 4519152 - -10.1  -6.60239   AAAAACAAAAAAAAA          GAAGCAAGC ACCTTTA GCTTGCTTC          TTTTTACTTTATATT 100 29
 JI729_23080 4517992 .. 4518009 -  -5.6  -6.34616   TTAAAATAAAAAAAA             GACAGT TTACAT ACTGTC              TTTTTTTACAAGAAG 100 31
 JI729_23075 4516733 .. 4516761 - -14.8  -4.09173   ATACAATAGGAGAAA        GCTGTTCCAAAA TGCCT TTTTGGAACAGC        TCATTAAAAGTTTTT 100 39
        ccpA 4515252 .. 4515273 - -14.5  -4.68103   TGAATCCGAATAAAA           GCTCACAGC AATC GCTGTGAGC            TTTTTTATACTTACT 100 36
 JI729_23050 4513813 .. 4513834 - -14.5  -4.91712   TTGAACGGATAAAAA           GGCATGTCC CTCG GGACATGCC            TTTTCTATATGCTAT 100 37
 JI729_23030 NONE
 JI729_23025 4509265 .. 4509284 -   -10  -5.57729   AAATAACATAAAAAA            CCTGCCAA TTAC TCGGCAGG             TATATTACACGTTAA 100 30
 JI729_23020 4508846 .. 4508872 - -12.4  -3.97042   TTATTATTAAGGAAA         GCTCACAGTCTC TAT AAGACTATGAGC         TAAATTTTCAGAAGA 100 33
        acsA 4503354 .. 4503400 - -13.3  -2.66812   AAGTTCATGATATCA TAAAAAAGAAAGGCCTGAACA TTTTT CGTTCAGACCTTCCTCTCTTA ATCTTCCATCGTTGA 100 23
 JI729_22990 NONE
 JI729_22985 NONE
 JI729_22980 NONE
 JI729_22975 4501161 .. 4501183 -  -9.9   -5.9667   AAAAACATAAAAAAA           TCGCCCCTT CAAAT AAGGGACGA           TTTTGATCATCGCGT 100 321
        tyrS 4499813 .. 4499835 -   -15  -5.83211   GATTAAAACAAAAAA           GCTTTGAGGA AAT TCCTCAAAGC           TTTTTATTTATTAGT 100 36
 JI729_22965 4499130 .. 4499156 - -13.2  -3.12083   TTAAGAGATATAAAG         CCCTATCAGAAA AGT TTTCTGATAAGG         AAAATACATTTGAAA  95 459
        megL 4491658 .. 4491716 - -14.9  -4.75356   AAACATATGTAAAAA GAAAAGAGCGAGTTATCGATTTAGTAC GCCCT GTACAAAACCGATAGCTCACTCTTTTT TATTGATTAACAGTA 100 25
        refZ 4490358 .. 4490384 - -10.9  -5.23644   AAGTAAACATAAAAA         TCCCCACCTCA GTTCG TTAGGTGGGGA         TTCTTCACATATGAA 100 30
 JI729_22900 4488333 .. 4488343 -  -4.6  -4.88736   CATTATGTATAAAAA                 GGGA ATT CCCC                 TATATTTAACAACTA  72 151
        ezrA 4486537 .. 4486560 - -12.6  -5.75478   AATTACATAAAAAAA          CAAACCCTTT TATG AAAGGGTTTG           TTCATTGTCTACATA 100 11
 JI729_22890 NONE
        thiI NONE
 JI729_22880 4483483 .. 4483508 - -17.7  -5.47159   TGGCAACACAAAAAA         GAAAGAGCGGG AGAA CCCGCTCTTTC          TAAGCCATCATATGG 100 43
 JI729_22875 4481676 .. 4481689 -  -6.7  -3.25191   TTAAGTTTATAAAAT               CGAAC TTGT GTTCG                TTTTTATATTATCAT  64 84
 JI729_22870 4481181 .. 4481202 -  -7.3  -5.94713   ATTGTATAAAAAAAA           GCACCATTT CAAA ACATGGTGC            TTTTCTAAAAATTAC  95 37
 JI729_22865 4479430 .. 4479467 - -23.1  -4.33274   TTTATAGGATTAAAA   TAACCGCAGAATTATGG AATT CCATAATTCTGCGGTTA    TTTATTTACCCCGAT 100 132
 JI729_22855 NONE
        ytfJ 4477329 .. 4477362 - -10.5  -5.64274   TTATTTACAAAAAAA     TTAAAGAAGCTAACC TATT GATTAGCTTCTTTAT      TCGTTAAATTTGAAA 100 29
         tpx 4476699 .. 4476719 - -12.7  -5.35459   ATATATGAGAAAAAA            TGACCTCTT TAT AAGAGGTCA            TTTCCTTCACATTAC 100 37
 JI729_22840 4475331 .. 4475343 -  -4.9  -3.49176   CAAATTCACTAAATA                TGAAA ACG TTTCA                TCATTAGCAAATTTT  55 227
        ackA 4474014 .. 4474037 - -11.8  -5.80951   ATCCAAAAGAAAAAA          GACGAAATCC TATA GGATCTCGTC           TTTCTTTTCATATAT 100 40
 JI729_22820 4471890 .. 4471911 - -12.3  -5.46129   CAACAAATTAAAAAA           GCGAAAGGC TTCG GCCTCTCGC            TTTTTTTATGCTCTT 100 31
 JI729_22810 4470150 .. 4470178 -  -3.7  -5.31059   ACACCAATGAAAAAA        GCATGCCCCTCAA TTA CTTTGGGTCATGC        TTTTTTTGTCGTAAC  73 6
        argG NONE
        argH 4467029 .. 4467065 - -10.2   -5.2112   AATATTATTAAAAAA    CAAAGTACGCCAGACT TTACT AGACTGGCGTACTTCC    CAACTCAATTCTTAA 100 30
 JI729_22790 4466582 .. 4466607 -  -8.9  -5.50723   TGATTAAAAGAAAAA         CGACTGCAGGC GAAT GCCATCAGTCG          TTTTCTTTCTTTATT 100 36
 JI729_22780 4465575 .. 4465598 -  -7.5  -4.62471   AATTTATAGATAAAA          CACCAAGTCC ACATA GG-CTTGGTG          TTTTTCATTTTATAA  81 30
 JI729_22770 4464091 .. 4464104 -  -3.1  -3.84712   TAATTTTATATTAAA               GGACA GTAT TATCC                GCACCTCTCAGCACA  52 85
         ald 4462779 .. 4462801 - -10.6  -5.24129   TTTCTCCATAAAAAA           GACCCTCCTC ATA AAGGAAGGTC           TCGAATGTATTTCTA 100 41
 JI729_22760 NONE
 JI729_22755 NONE
 JI729_22750 NONE
 JI729_22745 NONE
 JI729_22740 4459992 .. 4460015 - -16.8  -3.30124   GGTGAGGGCTGATAA          TCAGTGGGGG ATGC CCCCCACTGA           TTAAAGTTTCACTTT 100 228
 JI729_22730 4459465 .. 4459488 -  -6.8  -5.56568   ATATTATTAAAAAAA          GAAGGCCACTC AAA AAGT-GCCTTC          TTCTATTTCACTAAT  90 11
 JI729_22725 NONE
 JI729_22720 4458620 .. 4458651 - -14.7  -4.19577   CAATTTGTAAAATAA      TAAAAAAGGCAGC TTGATT GCTGCCTTTTTTA       TTTCTCTACTATTTC 100 23
 JI729_22710 4456652 .. 4456680 -  -5.4   -5.4492   TACACACATAAAAAA        CCCTTCACTT TTCTTTTTC AAATGAAGGG        TTTCTTTTCTATAGT  82 34
 JI729_22700 4454894 .. 4454924 - -16.4  -5.77677   TAAAACAACAAAAAA       GATGGAACAAATCA AAA CGATTTGTTCCATC       TTTTTATTTATCGAT 100 29
 JI729_22695 4454443 .. 4454478 - -15.1  -3.40639   AAGTCTATGAAGCAA    CATAAAAAAGCATCA ATATTG TGATGCTTTTTTATG     TTGCTTCACTTTCAA 100 2
 JI729_22685 4452996 .. 4453030 -  -4.4   -5.4433   ATAGAGAAAGAAAAA    TAAAGAAGGAG-GGC TTTAGC ACCGCTCCTTCTTTT     CGTTCTAACATATAG  78 45
        dnaE 4448676 .. 4448700 -  -2.1  -3.21099   TGGTCTGACCACGAA          CACTACTACTA TAA TAATCGAAGTG          TAGGGAAATTGTCCA  42 41
 JI729_22665 NONE
 JI729_22660 4446571 .. 4446613 - -12.2  -3.65224   AGGTTAGCGTAAGAA GAAAATGGGGCTAACACCAA AGT TTGATGTTAGCCTTATCTTC TCAATCTGTCTAATA 100 127
 JI729_22655 NONE
        accA 4444666 .. 4444691 -  -6.9  -5.18726   TTTTCATAATAAAAA         CGTGCATTC GCGAAGTG GAACGCACG          CTTTTCTTATTTTAT  84 32
        pfkA NONE
         pyk 4441767 .. 4441788 -  -9.5  -5.75342   TTTGTGTAAAAAAAA           GAGAAGGAC TCCG ATCCTTCTC            TCCGTATTACTTATA 100 36
        fxsA 4441186 .. 4441216 - -14.3   -5.5208   TTACAAGACAAAAAA       TAGCACTTAGATT TCTAC AATCTAAGTGCTA       TTTCTGAATAATAAT 100 23
 JI729_22625 4438275 .. 4438313 - -12.8  -4.91109   GTTTTATGATAAAAA   CAACATAAAACAATATCA TTA TAAAATTGTTTTATGTTG   TTTTTATTTTATCTG 100 155
        citZ 4436786 .. 4436805 -   -10  -3.78022   TTCATATGTATGAAA            CTGAGGGA ATAA CCCCTCAG             TTCAAACCGTTAGTC  86 127
         icd NONE
         mdh 4434446 .. 4434484 - -15.7  -3.59649   AAACAATTCGGTAAA  TAGTAGAAAAAGATTCGG AATC CCGAATCTTTTTC-ACTA   CTATTCAATTATTAA 100 37
 JI729_22605 4433754 .. 4433790 - -18.2   -4.8622   TTTTTCAACTAAAAA    TAGCGCTAGCATCCCT ATTAA AGGTATGCTAGCGCTA    TTTTTATTTTCATCT 100 42
        phoP NONE
        phoR 4430322 .. 4430377 -  -7.2  -5.71712   TTTCACAGAAAAAAA CCGTTCCTTTCCTCTCTCTATATTAAC ATG ACTAATAGAGAGA-AGAAAAATAACGG CTATTTTCTTTCATA  95 204
        polA NONE
        mutM NONE
        ytaF 4426060 .. 4426083 -   -11  -4.77165   CTCCTCATAATAAAA          GGCGCGAAAC TAAT GTTCCACGCC           CATACTTACATTTTC 100 31
        coaE NONE
 JI729_22565 4424258 .. 4424281 -  -8.9  -5.88061   AAAAAATTAAAAAAA          GAGGGCAAA TATTGC CTTGCCCTC           TCCTCCCTTATTCAC 100 41
       speH1 4423476 .. 4423494 -  -9.6  -5.42514   TTATAAACTAAAAAA             GAGGTGCA TTA TACACCTC             TTTACATTTTAAATC 100 55
        nrdR 4422707 .. 4422732 -  -6.1  -4.66163   ATTCTTAGTGAAAAA         GAGCTATTAGC TTGC GCTTCTAGCTC          TCTTATCCTATTACT  76 72
 JI729_22550 NONE
        dnaI 4420216 .. 4420247 - -15.4  -3.30389   AATATCACTATAATA      CAAAAGAGCAAGCT TCTC AGCTTGCTCTTTTA       CTTATGACGACGGTT 100 23
        ytxC 4418627 .. 4418653 -  -9.4  -5.79595   TCTCAAAATAAAAAA         CACTCACCCCGT AAA AAGGGACGAGTG         TTGAATTCGTGGTTC 100 272
        thrS 4416631 .. 4416648 - -14.1  -5.40625   ATATTACATAAAAAA             GCCGCGG TATA CCGCGGC              TTTTTCTTATCGTTT 100 32
        infC NONE
        rpmI NONE
        rplT 4415103 .. 4415126 - -12.6  -6.04953   ATACAAATAAAAAAA          CCTTAGAAGA AAAT TCTTCTAAGG           TTTCAACTAATTAAT 100 40
 JI729_22510 4414186 .. 4414198 -  -4.9  -4.13271   TATACAATAATTAAA                TTGAA ATA TTCAA                AAATTAAATTAGTAT  62 34
 JI729_22505 4413015 .. 4413050 - -15.8  -3.63744   GGCCTTTTTAAAACA    TA-AAAAAGCGAAGGAG AAT CTCCTTCGCTTTTTCTA    TTAATTAAATGTAAT 100 26
 JI729_22495 4411422 .. 4411434 -  -3.4  -2.70298   TCCTGCAATTACAAT                TGAG GACAT CTCA                TCTCCCCCTTACTTA  42 34
 JI729_22490 4409615 .. 4409649 -   -16  -3.63097   ACTGCATAAAGAACA     CAAAAAAGCAGGGAAT TTA ATTCCCTGCTTTTCTA     TTTGGTTTATTGCCT 100 7
 JI729_22460 4405736 .. 4405759 -  -8.9  -6.20267   TTAAAAATAAAAAAA          CCTCGCTCCC AAAAA GGGA-CGAGG          TAAATTCGCGGTACC 100 290
        pheS NONE
        pheT 4402200 .. 4402220 - -11.2  -5.83226   AATCCAATAAAAAAA            TTGCCGGA ATGAA TCCGGCAA            TTTTCTAATTACTTA 100 34
        asnS 4400346 .. 4400365 - -13.6  -5.48213   TATGTAAAATAAAAA            GCGAGAGG AAAT CCTCTCGC             TTTTTTTCATATTTT 100 39
 JI729_22440 4400096 .. 4400151 - -11.4  -3.90843   AATTAACGATAATAA GATGTAACACATAACAAAGGAGAGCCC TTA AGACTCTCCTTTGTTATGT-TAGCTTC GTTTCTGCTTCTTAT 100 18
        zapA NONE
 JI729_22415 4397574 .. 4397597 -    -9  -5.71712   TTTCATAGAAAAAAA          CTTCTCTTTC CGAA AAAAGAGAAG           TTATACTCTGCTACC 100 26
        polX NONE
 JI729_22405 4393277 .. 4393316 - -11.6  -4.41353   TCACATATATTAAAA  GCGTCAATCTATGGCAATA TCA TTCTGCCAC-GATTGACGC  TTTTTCACTTCGCAA 100 153
 JI729_22400 4392182 .. 4392208 - -14.5  -5.23016   AAAGAACGCAAAAAA         CACCCGTCCCT AACAA AGGGACGAGTG         TTGAAATCGTGGTTC 100 376
        brnQ 4390723 .. 4390747 - -11.6  -5.24129   TTTTTTTACAAAAAA          GAGACTTTCT GTTAT AGAAAGTCTC          TTTTCTCTATTTCTC 100 32
        isdC NONE
 JI729_22385 NONE
 JI729_22380 4386743 .. 4386772 - -11.6  -4.10459   TACAATATGAAACAA       GTCTTGATGCAC GCGAAT ATGCATCAAGAC        TCCAAAAATTACAAT 100 34
        isdE 4385826 .. 4385840 -    -5  -4.34402   TCCTTTATATTAAAA               TGCATC ACG GATACA               TCATTTTTTTCAATT  67 15
 JI729_22370 NONE
 JI729_22365 NONE
        srtB 4383208 .. 4383253 - -18.7  -3.53224   CAGTCCTTTTTTAAA GTATAGAATATGAGAAGCGTT ATCT ATCACTTCTCATATTCTATAC TTTTTTCTTTAATTT 100 34
 JI729_22350 4381332 .. 4381365 - -19.1  -3.63341   AATATCGTTCAATAA     GAAAAGGAGCTCAAG TAAA CTCGAGCTCCTTTTC      TTTATTAACCTTTAA 100 30
 JI729_22335 NONE
 JI729_22330 4379135 .. 4379161 -  -7.4  -5.42259   TTACGCTGAAAAAAA         GCTTGTAGAA TCTACTT CTCTACAAGC         TAAAACAGCATCTTT  90 25
 JI729_22325 NONE
 JI729_22320 NONE
 JI729_22315 4377229 .. 4377241 -  -2.7  -2.85351   TTGCTTCACACCACA                TCAAT CTT ATCGA                TTTTACGAAACGATA  41 3
 JI729_22310 NONE
 JI729_22305 4375555 .. 4375575 -  -6.1   -5.4492   TACATATACAAAAAA            GAGTTAGTG TAA CGCCAACTC            TTTTTTCTTATTCTT  86 42
 JI729_22290 NONE
 JI729_22285 4373124 .. 4373149 - -13.4  -4.43309   GAAGGTTAATTAAAA         GACGGCTTCA TATATG TGAAGCCGTC          TTTTCCTATTATGGC 100 34
 JI729_22270 4368458 .. 4368485 -   -10  -3.96188   AATTATATGTAGAAA        CTCTCTTAATCT TAAA AGAGTAAGAGAG         TTATAGTTTAACTTA  90 33
 JI729_22265 4366613 .. 4366624 -  -7.2  -4.85782   TTTTTCAAAAAGAAA                GGGC CTTA GCCC                 GTTTGCTCATCCTCA  85 19
 JI729_22260 NONE
 JI729_22255 NONE
        etfB NONE
        etfA 4363197 .. 4363221 -  -7.2    -4.946   ATTAAATACTAAAAA          GATGAGAGAC AGGGG ATCTCTCACC          TTTTTCTATATATAG  85 74
        trxA 4362707 .. 4362746 - -15.4  -5.10077   AAAGACTGTAAAAAA  GAAAATAAAAAAGCTACC AAAT GGTAGCTTTTTTATTTTA   GAAGTGTTTAGAAAC 100 23
        uvrC 4360796 .. 4360826 - -14.2   -5.2422   AATTATACCAAAAAA       CAGAAGACGTTGTA AAC TACAACGTCTTCTT       ATCTGTTAAATACGT 100 11
        sdhC NONE
        sdhA NONE
        sdhB 4356716 .. 4356764 -   -15  -4.23487   ATAAACAGAAAAATA TAGTTATAAATATTGCCTCTTC GATAT GAAGAGGCAATATTTATTAATA GTTATTATCGCTACC 100 20
 JI729_22210 4356181 .. 4356203 - -13.6  -5.48063   ATGGAAGACAAAAAA           TAAGAGAGCA AAT TGCTCTCTTA           TTTTTCTTTCACTCT 100 42
        motA NONE
        motB 4353536 .. 4353567 -   -19   -4.1899   TCATTTGATGTAAAA      TAAAAGAGGATGGC ATTC GCCATCCTCTTTTA       TTTTACTTTCTCTGT 100 23
 JI729_22185 NONE
 JI729_22180 4350219 .. 4350243 -  -9.4   -5.4433   ATACATAAAGAAAAA          GCATGATTTC AATAA GAAATCACGC          TTTTCTCTCATTATT 100 36
 JI729_22175 4349671 .. 4349699 -  -4.6   -5.7946   TTCTGAATAAAAAAA       GGCGAGC--CCTCA TTA TGAGGAAGCTCGCT       TTTTTTATTCTTTCA  90 30
 JI729_22160 4347167 .. 4347190 - -12.6  -4.34866   ACTTAAGAAGAGAAA          TCACCTATAG AATC CTATAGGTGA           TTTTTTCATGAAGAA 100 31
 JI729_22150 4345471 .. 4345502 -  -3.1  -5.64873   TGTAAGAATAAAAAA      GAAGAGTTCTA TACTCACCAT TAGAACCCTCC       TCAAAATATTTAAAC  78 48
 JI729_22145 NONE
        gerE 4343709 .. 4343736 - -11.4  -5.72053   GAAGCAAACAAAAAA        TAGCCGACTTTT ATAT AAAAGTCGGCTG         CTTTCTTATAATTCG 100 31
 JI729_22135 4342854 .. 4342882 - -11.1  -5.10064   TGCAAGATAGAAAAA        TAACCGACCTTCT ATA AGAAAGTCGGTTT        CTTCTATATAAAGTG 100 108
        racE 4341839 .. 4341858 - -12.2  -5.26907   CAAGATAAAACAAAA            GCTCCTGA TTTC TCAGGAGC             TCACTTATATAAATT 100 47
        gerM 4340593 .. 4340616 -  -4.6  -4.51787   TATACAATAAAAGAA          GGGGAACT CAAAAAGC AATTCCCC           TTTCTTACTTAAGTA  67 58
 JI729_22120 NONE
 JI729_22115 NONE
 JI729_22110 4338620 .. 4338665 - -10.8  -3.24118   TACATAAAGTCAACA CCTTTTTTAAAAGAGGATAA TTTTTC TTATCCTCTTTTAAAAACTG CTTGTTCAACTAGCT  87 6
 JI729_22105 NONE
 JI729_22100 4338287 .. 4338343 -  -8.2  -4.92669   CACATAAAAAAATAA GCCCCCTAACTCGTTAG-CG-ACCGCAC ATT GTACGATTCAACTTACGAATTAGAGAGC TTATATATTGCGGAC  90 69
 JI729_22090 NONE
 JI729_22085 4335368 .. 4335391 - -12.6  -5.76237   TAGACAAACAAAAAA          CCTTGTTATC AAAA GATAACAAGG           TTTTTTTAGCGTCCC 100 311
 JI729_22075 4334243 .. 4334266 - -12.6  -5.88476   AAAACAAACAAAAAA          CCTTGTTATC AGAA GATAACAAGG           TTTTCTTAGCGTCCC 100 78
 JI729_22060 4332478 .. 4332500 -  -3.3  -4.93365   TTGTACAAGTAAAAA           TCCCCAGCA ACAAA CGCAGAGGA           TTCATCATTAATGGA  66 33
 JI729_22055 4331231 .. 4331244 -  -8.1  -3.51934   CTTCTCTTACAAACA               GGCAG TTTT CTGCC                TTTTGCAACCCTTAT  73 93
 JI729_22050 4329691 .. 4329716 - -16.3  -4.45083   TCTATATTTATAAAA         CAAGGCACGAT TTTA ATCGTGCCTTG          TTATTTTATTATGCA 100 34
        clpX 4328155 .. 4328187 - -10.8  -4.35044   GTAGCTAAACATAAA      GAAAAACAGCAATT ATAAA AATTGCTGTTTCCC      TTTCGCATTCGCATT 100 39
        lonB 4326359 .. 4326392 -  -6.8  -5.50723   TCACGAAAAGAAAAA     GACTCCGATTAAGC ATACAA ACTTAAACGAAGTC      TGGCAAATTTTATTA  90 51
         lon NONE
        ysxC 4323284 .. 4323336 - -12.4  -5.05782   ACGTACGCTAAAAAA TTTAGCAAAACAAAAA-CGCGCGAC ATTC GTCACGCGTTTTTTGTTTTTGTAAA TTTATGAATTGCTTT 100 2
        hemA 4320637 .. 4320676 -  -4.4  -2.78405   GTTATTTAAAAAACT  CATCCGAT-CATCCTTCCA AAT TATAAAGATGGAACGGATG  GTGTCCACACTTTTT  47 6
        ccsA NONE
        hemC NONE
        hemD NONE
        hemB NONE
        hemL 4315771 .. 4315792 - -12.3  -5.84381   TTATGAATAAAAAAA           TCGCTCCCC TTAT GGAGAGCGA            TTTTCTCTAATACAT 100 40
      spoVID 4314692 .. 4314717 - -16.3  -4.16284   ATAGCCTCTAAGAAA         GGAAGTGAGTG AAAA CACTCACTTCC          TTATTTCGTCTTTAC 100 26
        ysxE 4313463 .. 4313492 - -15.3  -5.40072   TTCGTGCCAAAAAAA       GAAGATAAGTAGA ATCC TCTACTTATCTTC        TTTCCCCCGCTATTT 100 159
        valS 4310421 .. 4310445 - -13.7  -4.92385   TATACGCAAAGAAAA          GAGACTCACCA ATA TAGTGAGTCTC          TAAAAACATTTTTAC 100 37
        folC 4309044 .. 4309065 -  -8.1  -5.88565   TGTAGAACAAAAAAA           CTAGATAGC AAAG ACTATCTAG            TTTTTCTCACGAATA 100 22
 JI729_21965 4307890 .. 4307913 - -11.2  -5.14698   AAATTCAAAAGAAAA          GAAAGAAGTA CATG TACTTCTTTC           TTACTCATTTTATTA 100 58
         maf 4307126 .. 4307149 -  -4.5  -4.86731   TTCTCTCAAAGAAAA          CCCCATGCA ATTTTA CGCATGGGT           TACATCAATATCAAA  72 14
        radC NONE
        mreB NONE
        mreC NONE
        mreD 4303787 .. 4303801 -  -2.9  -3.22094   TTCGACATAAAATTA               GAAAA TCCTT TTTTC               TTTTTCTTCCATCGC  45 8
        minC NONE
        minD 4302232 .. 4302263 - -12.4   -5.4505   CGTGTGAAGAAAAAA      GAAAGCACTTCGCA TATG TGCGAAGTGCTCTT       AACGGATTCCAAAGA 100 24
     spoIVFA NONE
     spoIVFB 4300509 .. 4300534 -  -9.1  -4.95547   TTTACAATAATAAAA         GGTTAGTGCTA TCGT CAACACTAACC          GATTAATTCTTCAAC 100 20
 JI729_21915 4299018 .. 4299033 -  -4.8  -3.01125   AGGTGCTATAAACTA              TAACAT AAAG ATGTTA               TCATGAATCATAGAC  51 65
        rplU 4298600 .. 4298616 -    -3   -2.6953   TTAACCAGAATTAAG              CGTTGA TAGCT TCAACA              ACTAGCTTAGTGTAA  42 4
 JI729_21905 NONE
        rpmA 4297901 .. 4297936 - -18.6  -3.07522   ATACCCCTTAATATA    GAAAAACTCTAACCTG CACT CAGGTTAGAGTTTTCC     GTGAGTTCTTATGCT 100 34
 JI729_21895 NONE
        obgE 4296026 .. 4296046 - -12.6   -6.0427   ACGATATAAAAAAAA            GACTGCCG TATTT CGGCAGTC            TTAATCGATAAATTC 100 26
 JI729_21885 NONE
 JI729_21880 NONE
 JI729_21875 NONE
 JI729_21870 4291348 .. 4291365 -  -7.7  -4.72846   CTACATAGGCAAAAA             GCTAGAG GTTC CCCTAGC              TTTTTACGTGTTTTA  85 21
 JI729_21865 4289389 .. 4289406 -  -9.9  -5.63374   CGAATATTAAAAAAA             GACTAGC ATTC GCTAGTC              TAAATGTTTCTTATA 100 20
        pheA 4288313 .. 4288339 - -15.3  -4.19624   TATTCCTAACAGAAA         GCCGTCCTAAA TATCT TTTAGGACGGC         TTCTTTATTTTGCTA 100 139
        nadB NONE
        nadC NONE
        nadA 4281553 .. 4281571 - -10.3  -5.53991   TATGTATGAAAAAAA             GCAACGG GAATA CCGTTGC             TTTACACACGCTCTA 100 27
        exsA 4279431 .. 4279448 - -12.7   -5.2166   CAAGAATGCAAAAAA             GGCGGGA ATAC TCCCGCC              TTTTTAAACTTCTTC 100 29
 JI729_21815 4278600 .. 4278621 - -14.5  -4.33755   ACGAAGATGAATAAA           GAGGAAGGG CTCC CCCTTCCTC            TTTTGTTTTGCTATC 100 36
 JI729_21805 4277197 .. 4277215 - -13.2  -6.01369   TAAATAAGAAAAAAA             GCAGCTCA CCA TGAGCTGC             TTTTTTTCTTACTTT 100 12
        ruvA NONE
        ruvB NONE
 JI729_21785 NONE
        queA NONE
         tgt NONE
        yajC 4271690 .. 4271714 - -18.7  -5.33921   AAAGTAACTAAAAAA          GGCCCTGCATA TTT TATGCAGGGCC          TTCCAAATTAGTTTT 100 33
 JI729_21760 4270478 .. 4270512 -  -5.1  -3.74238   TGAAATAAGTTGAAA    CT-TTAATCAGTGGGG TAAT CTCCACTGATTATTAG     TTAAACTAATCATTC  61 64
 JI729_21750 NONE
       secDF 4265878 .. 4265903 -  -4.8  -5.42514   CCACAAACGAAAAAA         GA-GATGCCTC ATAAA GAGACATCATC         TTTTCTATACTTGCG  81 30
 JI729_21740 4264761 .. 4264804 - -14.2  -3.92324   GGTTGTAACACGAAA TCACCCCTTAACCTGT-TCAT TAT ACAAGACAGATTAAGGGGTGA CAATATAATGCAAAC 100 79
        recJ 4262397 .. 4262414 -  -2.7   -4.2349   TCCTCAGATCTAAAA             GGTTTGT AAAT ACAAATC              CTTTACCCTAACTGT  55 28
 JI729_21730 4261792 .. 4261824 -  -6.9    -4.614   TTCAATTATACAAAA      GTACCCGCTCCTCTC CAA GAGATTCACGGGTAC      TTTTTATCACCGTAG  78 58
        relA NONE
 JI729_21720 4258960 .. 4259002 - -13.9  -4.02733   CAAAACATACAACAA TGTATAAAAAAGAGAGGATT ATAT AACCCTCTCTTTTTTAT-CA ACACTATTTACTTTC 100 29
 JI729_21715 4258357 .. 4258392 - -14.8  -6.23317   ATAAAAATAAAAAAA    CTCCCGCCTCTACTGT TTAA ACAGTAGGGACGAGAG     TATTATACCCGTGGT 100 297
        hisS NONE
        aspS 4255212 .. 4255242 - -10.7  -5.41746   AACCTCTCAAAAAAA      GTCTAGATGGT-AT TAGT ATAACCATCTAGAC       CCTATTCTTACTTCT 100 33
 JI729_21700 4254102 .. 4254126 -  -9.4  -5.18995   AACATAATAGAAAAA          GCATATACCC TTGAC GGATATATGC          TTTCTTTTTATTCTT 100 33
 JI729_21685 4250969 .. 4250985 -  -2.3  -2.66274   CGTTTCACAAGGAAT              TAAATGT AAA ACATATA              GCCCCCGTGATTTTC  39 8
 JI729_21680 NONE
        mnmA 4248619 .. 4248650 -  -8.1  -4.18018   TCGCTTTATGTAAAA      GAAACCTCTAACCG CTAAT CGGC-AGAGGCTTC      TCATTTATCCTAAAT  81 30
 JI729_21670 4247834 .. 4247857 -  -9.6  -2.84687   TTAATGAGCAGTACA          TCCCCCACCT TTTT AGATGAGGGA           TAACTACCCATTAAA  76 54
 JI729_21665 4245431 .. 4245476 -  -5.7  -2.72144   CTATGCGTTTGAAAG TTTCACTATATAATTTCACCT TGTT ACATGAAATCATACGGTGAAA TGTTTTCCACGTCCA  54 3
 JI729_21660 NONE
 JI729_21655 4244948 .. 4244967 - -12.2  -5.60993   GGGTGCATAAAAAAA            CTCCCTTG TCTA CAAGGGAG             TTTTTCACTTTATCG 100 47
 JI729_21645 4243066 .. 4243078 -  -3.5   -3.9941   TTTGTTATAATTAAA                TTATT GTT AATAA                AATAAAGGAGCGATC  56 433
        alaS 4239905 .. 4239931 - -12.4  -2.83345   CTTATATAGTAAGTA         TAGGGAGAAGAA CTT CTCCTCTCCCTA         CCATTGTACACTACT 100 47
 JI729_21630 NONE
        ruvX NONE
 JI729_21620 4238867 .. 4238888 -  -5.9  -6.15717   TAAATACAAAAAAAA           GATGGAC TGTATGTC GTCCATC            TTTTCAGTACTTATT  93 39
        mltG 4237570 .. 4237600 -  -6.2  -5.31275   TTTTACCACAAAAAA      GAGGGATGTGCGA CTTTTT TCGCT-ATCCCTC       CCCATTTCACTGTTT  82 32
 JI729_21610 NONE
 JI729_21605 NONE
 JI729_21600 NONE
         udk 4233631 .. 4233655 -  -7.2  -5.40474   ATCCCCCGAAAAAAA          GAGGAGTTCC ATATG AAAACTCCTC          CGCTTCCATTGTTAG  90 240
        greA 4233088 .. 4233108 - -10.5  -5.93809   GCGGGATAAAAAAAA            GATTCTCCC GAT AGGAGAATC            TTTTTTTTATTTTAC 100 32
 JI729_21585 4232072 .. 4232101 -  -8.7    -5.252   TATTTTCATAAAAAA       CACCTCGTCTA TTGTAGTT TAGACGAGGTA        CTATTTTATTTATAC 100 77
 JI729_21580 4230272 .. 4230288 -  -2.3  -2.97513   ACATTTACAATGATA              TTTTCAT GAA ATGAAGA              CATTTCACTATAAAT  41 48
 JI729_21575 4229505 .. 4229527 - -14.2   -5.4505   TGCGTTAACAAAAAA           GAGAAGCTCC TAA GGAGCCTCTC           TTTTTTAGTTTAGAG 100 30
 JI729_21565 NONE
        mtnN NONE
 JI729_21555 NONE
 JI729_21550 4225622 .. 4225646 -  -7.9   -5.8187   GATGTAATAAAAAAA          CGCACTGCT AATATAG AGCAGTGCA          TTTTTTATTATGCTA 100 33
        adhE 4222756 .. 4222776 -  -9.7  -6.09888   TTCCAATAAAAAAAA            GAGCCGC TTTTACT GCGGCTC            TTTTTTTATCATTAT 100 37
 JI729_21540 4222385 .. 4222417 -  -9.2   -5.8096   TACAAAAAACAAAAA      GCGCGACAAAAAGA TTTTT TCTTTTCGCTGCGC      TCTAGTTAACAATAT 100 40
 JI729_21535 NONE
 JI729_21530 NONE
 JI729_21525 NONE
 JI729_21520 4218950 .. 4218974 - -13.7  -6.04953   ATAGAAACAAAAAAA          GCAGTAGACAA ATA TTGTCCACTGC          ATCCATATCATAACT 100 177
 JI729_21515 NONE
 JI729_21510 NONE
 JI729_21505 4217272 .. 4217292 - -14.1  -5.72254   CTAAATAATAAAAAA            GAAGCCTGT TAA ACAGGCTTC            TTTTTTATCCCCTTA 100 30
 JI729_21495 NONE
 JI729_21490 4215262 .. 4215283 - -13.1  -5.92399   TAAGAAAATAAAAAA           GAGAAGCCT TTTT AGGCTTCTC            CTTTTATTTTGAAAT 100 15
 JI729_21470 4208030 .. 4208080 - -24.7  -4.08689   AATAAAACGCATAAA TAACAATAAAAAACTGCCTAAAA TGATC TTTTAGGCAGTTTTTTATTGTTA TTTCACCGAGATGAC 100 23
 JI729_21455 NONE
 JI729_21450 4206133 .. 4206175 -   -21  -3.67989   AAAATGTGAGTTAAA TGTGAAACACGTTTATTCGA ATA TAGAATAAACGTGTTTCACA CTAATTATAGAATCG 100 26
 JI729_21445 4205367 .. 4205410 - -10.6  -4.71482   ATCAAAGTTGAAAAA TA-ACATAAACGGGTATCTCA TTT TGAGATACCCGTTTTCATATA TTAAGCAGCTTGCTT 100 26
 JI729_21430 4201958 .. 4201976 -  -8.8  -5.26119   CTCCTAAAAAGAAAA             GCGAGGCA GTT CGCCTCAC             TTTCGCTCTTAATTA 100 38
 JI729_21425 4201395 .. 4201414 -  -7.9  -5.67967   ACCACTATAAAAAAA            GGTTCTC GCCAAT GAGAACC             TTTTTTCTATCATTT 100 78
 JI729_21415 4199663 .. 4199690 -  -7.8  -4.66833   TGTCAATTGCAAAAA        CAAGAAGATTCC ATTT AGAATCCCCTTG         TTTTTATAGTTAAAT  83 99
        rpmG 4199397 .. 4199416 - -10.8   -5.5112   TTTATTAACAAAAAA            GACTAGAG ATAT CTCTAGTC             TTCTACTTCGTTTCA 100 28
 JI729_21405 4197788 .. 4197836 - -12.4    -2.974   CGAACAGGCAAAGTA TAAAAATAAAAAGAGTTATTTTC TTTG AAAAATAACTCTTTTTATTTT-A CTTACTCCAAATCTT 100 23
        sigK 4195968 .. 4195991 -  -6.8  -4.95547   TTTACAATAAGAAAA          GCAGCC-CATT TCA AATATGGCTGC          TTCTAATACACTTTA  82 38
 JI729_21390 4194820 .. 4194838 - -13.2  -4.57073   GATGCCCTGTAAAAA             GAGCCATC TAC GATGGCTC             TCGAATAAACAAGTA 100 113
 JI729_21380 NONE
        yqeH NONE
        aroE NONE
        yhbY 4191459 .. 4191492 -    -9  -2.98823   TTCCTTTTATATACA     GCAACTCTCCTC GGTTAGGAAT GAAGAGAGTTGC      TATTAATAAAAGTTC  72 102
        nadD NONE
        yqeK NONE
        rsfS NONE
 JI729_21345 4189174 .. 4189200 - -13.9  -4.37092   ATCTTCTTTATAAAA         CAAAAGCAACC TTCTC GGTTGCTTTTG         TTTTTATCCGTTTTT 100 29
 JI729_21335 4187505 .. 4187517 -  -3.4  -3.65902   TGTAGTGTAGCGAAA                GAAG AAAAA CTTC                GTCAATCTTTTACGG  50 35
 JI729_21330 NONE
 JI729_21325 4184540 .. 4184560 - -11.9  -3.53444   TTATCGGTTCTTAAA            GACTGCCAC TTC ATGGCAGTC            TTCTCTTTTTCATCT  95 35
        holA 4182977 .. 4182992 -    -9  -5.01732   AAGGCGTTTAAAAAA              CGATCC ATTT GGATCG               TTTTTTTATATACAA 100 80
 JI729_21305 NONE
 JI729_21300 4181015 .. 4181044 -  -7.2  -4.24002   TTTCAAATTTTAAAA       CGGCTGTCCTAC AAATCA GTAAAACAACCG        CCTCCCATGTTACTC  77 41
        lepA 4178990 .. 4179009 -  -6.4  -5.43414   ATTATACAGAAAAAA            GAAGCCGC ACAA ACGACTTC             TTTTTTATTTCAAAT  86 42
 JI729_21290 4178499 .. 4178515 -  -9.4  -5.26119   TTTCTAAAAAGAAAA              CCTCCG CACTC CGGAGG              GTTCTCTACTTCTCT 100 31
 JI729_21285 4177299 .. 4177311 -  -4.9  -4.01158   AACGTCACGAAATAA                TGAAA CTT TTTCA                CGCCTATGGAACATT  61 44
        hrcA 4176089 .. 4176118 - -11.7  -2.74605   CCTCCTTAAAAGGTA       TTAGGTA-TCATGC ATA GCATGATTACCTAA       GCATTATATATTACA  89 87
        grpE NONE
        dnaK 4173588 .. 4173616 - -12.6  -5.02074   TCATTCGTGAAAAAA        GCCAAAGTCAAG GCACG CTTGACTTTGAC        TTTTTGTCATCTTAC 100 61
        dnaJ NONE
        prmA 4171306 .. 4171339 - -12.5  -3.22874   TTTCATATAACAAAC     GGCAAGTCTCTCACC TTAT AGTGAGAGACTCCCC      TTTTCATTATAGACT 100 51
 JI729_21255 NONE
        mtaB 4169080 .. 4169106 -  -9.5  -4.78326   CTTCAAATAAAGAAA        GCATGCAAACCG TTTC CGGTT-GCACGC         TCTTTTTATGCGCTA 100 31
        rpsU NONE
 JI729_21240 4168122 .. 4168163 -   -12   -3.9461   TCTCCTTAATAAGAA CAATAAAAAAACGTCTCAT ACGAA ATGAGACGTTTTTTTAC-G CTAATAGCTGGATAA 100 21
        yqfC 4166917 .. 4166949 -  -5.7   -4.0162   CTTTTACAGGATAAA      GAAGAAAAACTTC ACAAATG GAAGTTTCACTTC      AATCACCTTTTTTTT  66 24
        yqfD NONE
 JI729_21225 4164602 .. 4164630 -  -8.3  -5.00895   CTTATCATACAAAAA        GAAATGATCCT GACAAAT AGGATCATTCC        ATTTTATCATATGCC  90 19
 JI729_21220 NONE
        ybeY NONE
 JI729_21210 4161443 .. 4161455 -  -3.4  -3.57462   TACGGCACTTCCAAA                GCTT AATAA AAGC                TTCGGAATGCAACTA  50 38
 JI729_21205 NONE
         era 4160024 .. 4160056 - -14.4  -3.88001   GTTCATAAAAACCAA      TAATCAGTGGATGA ACCAA CCATCCACTGATTA      CAGCTTGACTCTATT 100 41
 JI729_21195 NONE
        recO 4158952 .. 4158967 -  -8.2  -4.72386   GAAAGTATGTAAAAA              GGACCG TATA CGGCCC               AAAATTATATTTGAA  87 30
 JI729_21185 NONE
 JI729_21180 4157366 .. 4157390 - -13.7  -5.11613   ACACGAGCGAAAAAA          GCACATTCACC TTT GGTAAATGTGC          TAAAACATTTTTTGG 100 25
        dnaG NONE
        rpoD 4153508 .. 4153533 - -13.5  -5.92399   TAACAAAATAAAAAA         GTTTACTTCAC AAAA GTGAAGTAAAC          TTAAAAAATAACCTA 100 38
        cccA 4152763 .. 4152790 -   -15    -5.186   GAAAATATAGAAAAA        CAAGCCCTTTGC ATAA GCAAAAGGCTTG         TCATACGGAACTTTA 100 38
 JI729_21160 NONE
 JI729_21155 4150762 .. 4150814 - -11.6  -4.23104   GTAAAGGTGAAGAAA GAACAATAATAAAAACCGTTGCCC TAATG GAGCAACGGTTTTTATTTTTCTTA TACAAATGTGAATGG 100 23
 JI729_21140 4147486 .. 4147505 - -10.8  -5.93809   GCGGGATAAAAAAAA            GATAAGGG AAAC CCCTTATC             TTTTTTTATTGCCAT 100 21
 JI729_21135 4146350 .. 4146374 - -15.1  -4.36411   CAGCAACTACTAAAA          TAAGGAGGGGA TTT CCCCCTCCTTA          TTGCGCTTTAATTTT 100 23
 JI729_21125 4145025 .. 4145043 - -11.8  -5.22006   CTATTATAACAAAAA             GCAGAGAA AAA TTCTCTGC             TTTCGAAAAATATTC 100 52
 JI729_21120 NONE
 JI729_21115 NONE
 JI729_21110 4142834 .. 4142856 - -14.2  -5.08824   TTTCTACGTAAAAAA           GCTCGTCAGT TTA ACCGACGAGC           TTTTACTTTGCACAT 100 28
 JI729_21090 4139948 .. 4139967 - -10.8  -5.41143   TATTCCGTAAAAAAA            GCTTCCTT CTAC AAGGAAGC             TTCCTGCTAACATAA 100 59
        sodA 4139118 .. 4139158 - -15.8   -3.1243   TATGTAAAAGGAAAG CATAGAAAAAAGCTAGGGG CTCT CCCCTAGCTTTTT-CTATA  TTTATTACGATTATT 100 36
 JI729_21080 4137703 .. 4137724 - -10.2  -2.79968   TATGTAATGTGAAAG           GGACACCT TCATAC AGGTGTCC            TCACTGCTGTCTTAC  78 76
 JI729_21075 4135498 .. 4135523 - -14.9  -6.04378   AAACCATAAAAAAAA         GCACACTATCT TTTC AGATAGTGTGC          TTTTTTACAACTTTT 100 41
 JI729_21070 4134264 .. 4134283 -  -3.6  -3.69323   TCATTATGAGCCAAA            GATGAAAA CCCC TTTCCACC             CCGACATTACCTTTT  52 32
        pstC NONE
        pstA NONE
        pstB 4131556 .. 4131575 - -12.2  -4.73973   AGATAAAATAAGAAA            TGCCCTCT GTTA AGAGGGCA             TTTGCTCTTAGCTTT 100 50
        phoU 4130725 .. 4130747 -  -8.5  -5.52384   TTTTGACTAAAAAAA           GCAGGTGAT TTCCC ATCACCTAC           TTTAATTCCTACTCA  95 34
 JI729_21045 4128044 .. 4128058 -  -2.2  -2.82586   TATACTATAATACCA               CTTTTA AAA TAAAAA               TTCTACACCTTTTGA  40 28
        rpmG 4127815 .. 4127844 -  -8.7  -5.83226   AATCGAATAAAAAAA       GAAACAGTAGGAA AATA TTCCTACTGCTTA        CTTTGTTTCACGGTG 100 23
 JI729_21035 4127167 .. 4127180 -  -5.3  -3.48593   TATTTGTCTATACAA               GCTTA TTTG TAAGC                ATTGTTCCTTTTTCT  57 4
 JI729_21030 NONE
        glcK 4125812 .. 4125834 - -13.5  -5.37043   ATTTCACACAAAAAA           GAGGAAGGG TTCCC CCCTTCCTC           TTTTCATATTTCACA 100 43
 JI729_21015 NONE
 JI729_21010 4123644 .. 4123669 - -14.9  -5.14965   AGTCGTATTAAAAAA         CAAGACACAGT ATAT ACTGTGTCTTG          TTTTTTATATTGTTA 100 30
 JI729_20985 NONE
        metH NONE
        murG 4112941 .. 4112966 -   -12  -4.26903   TTCACCCTACTAAAA         GAGGCATGAT TGTTTC ATCATGCCTC          TGAAATATTTTGAAT 100 17
 JI729_20970 NONE
 JI729_20965 NONE
 JI729_20960 4111436 .. 4111456 - -12.7  -5.48825   TATTATGTAAAAAAA            GAACGTGAT CCA ATCACGTTC            TTTTTTCATTATACG 100 34
 JI729_20950 4110589 .. 4110610 -  -4.5  -5.14985   TTAAACATAGAAAAA           GAGAATATA ATAA CATATCCTC            TTTCCTCAAATATAT  75 66
 JI729_20945 4110101 .. 4110126 -   -12  -5.68023   TCATAATGAAAAAAA         GACGCTAACA TACAAT TGTTAGCGTC          TTTTTTATTCCGTTC 100 70
 JI729_20925 NONE
 JI729_20920 4105264 .. 4105276 -    -2  -3.81488   GCCCCCTAAATAGAA                TTCA TCATT TGAA                ACATCGGCATAATCA  49 3
 JI729_20915 NONE
 JI729_20910 NONE
 JI729_20905 NONE
 JI729_20900 NONE
 JI729_20895 4103248 .. 4103264 -  -2.3  -2.64091   AATGATTGGATAGCA              TGAATAT ATC ATATTCT              TTCTACCTTTCTCTT  39 149
 JI729_20890 4102517 .. 4102548 - -11.2   -5.7946   TGTTTAATAAAAAAA      CGTTTTGTTCTT-AT ACT ATAAAGAACAAAACG      TAACACTCGCTTTTA 100 38
 JI729_20885 NONE
 JI729_20880 4101651 .. 4101678 - -14.3  -5.33405   TGCAGTAAATAAAAA        TCCCCTAGTGT AATAAG ACACTAGGGGA         TTTTTGGTTTGCTAA 100 56
 JI729_20865 4100431 .. 4100455 - -11.5  -5.71712   CCTTATACAAAAAAA          TAAGAGCAGCC ATT GGCCACTCTTA          CTCGCTCACATATTT 100 23
        gcvT NONE
       gcvPA NONE
       gcvPB 4093358 .. 4093377 -   -10  -5.71712   CTCCATACAAAAAAA            GAACCCGC CTCA GCGAGTTC             TTCCTTTGTTATTTT 100 43
 JI729_20835 NONE
 JI729_20830 4092453 .. 4092474 -  -8.8   -5.7946   TTGGCAAGAAAAAAA           GACCAACA TTTTCC TGTTGGTC            TTTCGTATATGTATC 100 39
 JI729_20825 NONE
 JI729_20820 NONE
 JI729_20815 NONE
 JI729_20810 4089429 .. 4089440 -  -4.4  -4.76191   ATACACTAAAATAAA                GCTA ATAC TAGC                 AACCATTGTCGTTTC  68 406
 JI729_20800 4088717 .. 4088747 -  -4.2  -4.68424   TAAGTTATTTAAAAA      GGACAG-TACTTCT GAAAA AGA-GTAACTGTCC      TTTTTTATATTCATT  65 36
 JI729_20770 4085216 .. 4085236 -  -9.8  -5.48787   ATAACATACAAAAAA            CTAGCTGA ATAAA TCAGCTAG            TTTTTTCATTTCATC 100 31
 JI729_20760 4083788 .. 4083813 - -10.5  -5.67063   TTTACTATAAAAAAA         TAAGAGGTGGC TATC GCCATCTCTTA          TTTTTTATAATTCCA 100 23
        mntR 4080716 .. 4080734 -  -7.4  -5.67283   AATTGAAATAAAAAA             GGAAACGC CAT ACGTTCCC             CTTAATTACTTTTCT  95 27
 JI729_20730 4080001 .. 4080037 - -11.7  -5.31158   CAAAAAAAGCAAAAA    GAAAGACCGTGCTTCCT TTT AGGAAATACGGTCTTTT    TTTATACTTTGAAGT 100 7
 JI729_20715 NONE
        aroQ NONE
        pepQ NONE
         efp 4075719 .. 4075742 - -15.4  -5.24531   ATTTCCTATAAAAAA          GCACTCGTGA ATTA TCACGAGTGC           TTTTTTACTATGCAC 100 33
 JI729_20685 NONE
    spoIIIAA NONE
    spoIIIAB NONE
    spoIIIAC 4072661 .. 4072671 -  -5.4  -2.60219   GACAATTTGTATAAT                 TTCG ATT CGAA                 CCGCCTCCTTTACTG  51 35
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
 JI729_20645 4069097 .. 4069124 - -17.2  -3.99481   CTTAGTAAAAGATAA        TAATCCGTAGGG AAAT CCCTACGGATTA         AGGTTTCACTTATTT 100 35
        accB NONE
        accC NONE
 JI729_20625 4066054 .. 4066075 -  -6.6  -5.42265   TGAAACGATAAAAAA           GATGCCTA TGTTAC TAGGCACC            TTTTCATTCTTACAC  89 35
        nusB NONE
        folD NONE
        xseA NONE
        xseB NONE
        ispA 4061837 .. 4061861 - -10.7  -4.40552   GCGATGAAAAAAATA          GCCGCTAACAC GAA GTGATAACGGC          AATGTAATCTACATA 100 131
 JI729_20595 NONE
 JI729_20590 4058915 .. 4058938 -  -8.2  -4.84274   CAATTACAGCAAAAA          GAGGAACAAC ATAT GTTATTCCCC           TTTCCCTTTTTGTTT  87 17
        argR 4058289 .. 4058332 -  -9.1   -5.1963   TTTAACCAATAAAAA TATCTTGTTCACTTTCCAC TTTACG ATGGAAAGCAAACAAGATT TTTTGTTACAGCATA 100 31
        recN 4056326 .. 4056345 - -10.8    -5.626   CATTTGAGAAAAAAA            GCTATCCA TTAC TGGATAGC             CTCTGCTGTCTGTTT 100 14
      spoIVB 4054899 .. 4054925 - -13.9   -5.0916   TTTTCAACAGAAAAA         GCGAGCTAATA ATATA TATTAGCTCGC         TTTTTTCTCTTGATC 100 17
       spo0A 4053705 .. 4053732 -  -9.3  -5.62288   TCAACAAAATAAAAA        GACCAACGAAT TATAAC ATTCATTGGTC         TTTAAATAAAAAGTT 100 125
 JI729_20565 4052780 .. 4052796 -    -8  -3.35857   ACGAAGAATAATACA              GTCCTG TTTTG CAGGAC              TTTTTATTATTTTCT  69 245
 JI729_20555 4051830 .. 4051852 -  -9.2  -6.02919   TTATAAATAAAAAAA           TGAGACCG TTACACG CGGTCTCA           TTTTTTTATTGGCAA 100 23
 JI729_20545 4049332 .. 4049364 - -13.7  -2.62263   ACTTTTTGTATACCA      TGCAATAAATTGCAC GGT ACGCAATTTATTGCA      TGCTATTTTTTGCAT 100 18
        yqiS NONE
 JI729_20535 4047073 .. 4047098 -  -7.5  -3.73399   TAAATTCAAAAGGAA         GTGGAAACCTC ATAA GAGGTAACCAC          GCCTTTTGTAAAAGT  71 54
 JI729_20530 NONE
        lpdA NONE
      bfmBAA NONE
      bfmBAB NONE
 JI729_20510 4041116 .. 4041153 - -11.5   -4.2602   TAGATGAAGAAATAA   GATAATAAAAAGCTCGC ATAA GCGAGCTTTTTATTAAT    ATACAGATGTATTAT 100 21
 JI729_20505 4039597 .. 4039622 - -16.3  -5.14477   CATATATGTAAAAAA         GCTGGTTCGTT TAAA AACGAACCAGC          TTTTTTTACTTAACT 100 31
 JI729_20500 NONE
 JI729_20495 4038192 .. 4038203 -  -7.2  -3.64801   AAAAGATTAGAAATA                CGGG ACAT CCCG                 GAGGGGAAGGTTACT  69 104
 JI729_20490 4037711 .. 4037756 - -17.9  -3.06183   TTTACTTGTATTTAA GTATAGAAAAGGTGTTAGAGC TCTT GCTCTAACACCTTTTCTTTAA TGACGACGATGTTTT 100 22
 JI729_20485 4037147 .. 4037180 - -20.4  -5.82036   ATAATAAATAAAAAA     GGCGGCACATCCAC TTGATT GTGGACGTGCCGCC      TTTTCTCTTATTTTT 100 40
 JI729_20480 4036157 .. 4036177 -  -5.4  -3.98312   CACAGAAAAGTGAAA            GGCAGC TTATTTTCC GCTGCC            AAACCATTTCTTCAC  63 11
 JI729_20475 NONE
 JI729_20470 4034700 .. 4034718 - -11.8  -5.67063   GCTAGTATAAAAAAA             GGATGACA CAA TGTCATCC             TTTTCTACTTATTAT 100 59
 JI729_20465 NONE
 JI729_20460 NONE
 JI729_20455 4032770 .. 4032807 - -18.1  -3.58905   ACTTTTTACACATAA   CAAAATAAACCATCTCG ACAT CGAGATGGTTTATTTTA    TATAAAACACAATCG 100 18
 JI729_20445 4031829 .. 4031847 -  -4.6  -3.79995   TTAATTATAACAGAA             TTTCGCAA AAG TTTCGAAA             TACAAGACAAAAAAC  59 78
 JI729_20440 4030613 .. 4030640 - -15.8  -5.54338   GAATCAAAATAAAAA        GCGTGTAAATCA CAAT TGATTTACACGC         TTTTTCTATTTCATT 100 39
 JI729_20435 4028674 .. 4028706 -  -9.2  -4.56775   AGCTGGTTGTAAAAA      TAAGAATGAGTGGG TATTC CCCGCTCATTCTAA      AAGACATAACACATA 100 238
 JI729_20420 4024734 .. 4024763 - -15.3  -3.41878   TCTCGTAATCTATAA       TAAAAAAGCACTG GTTA CAGTGCTTTTTTA        TTTATACTTATTTAA 100 23
 JI729_20410 4023328 .. 4023346 -  -7.5  -5.76633   TTAGACATAAAAAAA             TGGTAAC CCGCC GTTACCA             TTTTTTATAAAATTA  95 41
 JI729_20405 NONE
       sdaAB 4021803 .. 4021813 -  -2.4  -2.60496   TGCGTTCCGAAACAT                 GGTG TGT CCCC                 CCTGCAATTATTCCA  39 33
       sdaAA 4020869 .. 4020920 - -11.9  -4.84262   GAACAACTAACAAAA GAAAAATAGAAAAAGGAGCTCAA GTTTAT TTGAGCTCCTTTTTCTATAATTA CACTTAGTTATTGTT 100 29
 JI729_20385 NONE
 JI729_20380 4018090 .. 4018117 - -15.8  -5.77677   GAAAACAATAAAAAA        TAGGAGATTTCC ATGT GGAAATCTCCTA         TTTTTTACTTAATGA 100 23
 JI729_20370 NONE
        argJ NONE
        argB NONE
 JI729_20355 NONE
        argF 4012494 .. 4012510 -  -8.7  -5.80817   TTTAATATAAAAAAA              CCTCCCT TTT AGGAAGG              CTCTTCTACATTTTT 100 17
 JI729_20345 NONE
 JI729_20340 4011503 .. 4011532 - -16.7  -2.84636   TTGAAAACAAACGTA       TAAAGCTGCTTCT AAAT AGAAGCAGCTTTA        TGATTCGTAATAGTT 100 23
        cpdB 4007449 .. 4007469 - -12.7  -5.31072   ATAATATAACAAAAA            GGATTACCA AAT TGGTAATCC            TTTTTATATTTCTCT 100 42
 JI729_20315 4005038 .. 4005065 - -14.4  -5.02476   ATAGTTCTTAAAAAA        GAACAACTTATC ATAC GATAAGTTGTTC         TACTTTCCATGCTGT 100 25
        bioA NONE
        bioD NONE
        bioF NONE
 JI729_20295 NONE
        bioC NONE
        bioB 3999126 .. 3999147 -    -3  -5.64274   TTATTTACAAAAAAA           GCAAACCC TTTTAC AAGTTTGC            TTTTTCATCTATCTT  78 39
 JI729_20280 3998641 .. 3998654 -  -8.1  -5.93809   TGGGCATAAAAAAAA               GAGGC TGCG GCCTC                TTTTTATTTTTTCAC 100 29
 JI729_20250 3993798 .. 3993837 - -14.6  -3.66541   AACACATATGTGAAA  GAAACAAAAAACAGGCTT GCAT AAGCCTGTTTTTTATTGC   GCTAAAACGTCTGTA 100 19
 JI729_20240 NONE
 JI729_20235 3991347 .. 3991365 - -10.3  -4.95758   ATTACATTATAAAAA             GGTGCGT ATAAA ACGCACC             TTTTACTTTTTCATT 100 28
 JI729_20220 3988258 .. 3988289 -    -6  -4.96762   TATACATCATAAAAA      GGATACT-CGTTCTT CCA ATGAACATAGTATCC      TTTTCTTTAGTTATC  77 32
 JI729_20210 3986079 .. 3986102 -  -9.7  -5.01732   AAGCTCGTCAAAAAA          TGATCAGTG GTATTT CACTGATCA           TTTTTTATTATTTAA 100 33
 JI729_20205 3985509 .. 3985534 -  -9.2  -5.14477   TATATAGCTAAAAAA         TAACGTGAAT TCATTC ATTCACGTTA          TTTTTTCTCCATTCT 100 10
 JI729_20200 3984534 .. 3984560 -  -6.6  -3.90766   TACCGATAAATAGAA         GATTGTCTCC AGTATTA GGAGACAGTC         TTTTTTATAACGTAT  71 30
 JI729_20185 3982732 .. 3982750 - -14.6  -5.33921   AAATCAATTAAAAAA             CACTCGCC TTT GGCGAGTG             TTTATTTTTGTAGTT 100 27
      spoIIM 3981379 .. 3981395 -  -2.3  -5.11254   AACAATAAAAACAAA              TTGATAA TTA TTCTCAA              AAAGTATTTATTTTT  65 33
 JI729_20170 3980814 .. 3980839 -  -8.4  -5.65927   TATTCAAATAAAAAA         CCTCTTCCTA GATAAA TAGGAAAAGG          TTATTTTTCATCCGT  95 26
 JI729_20165 NONE
        xerD 3979598 .. 3979616 - -11.8  -5.54894   AATCTATGAAAAAAA             GAGCATAG TAA CTATGCTC             TCGGATGAAACTGTT 100 18
 JI729_20155 3978694 .. 3978723 - -15.3   -4.8048   TCTTCATATTAAAAA       TAAAAAGTAGCTC TAAA GAGCTACTTTTTA        TTTTACTTCTATTGT 100 23
        deoB NONE
 JI729_20145 NONE
 JI729_20140 3975006 .. 3975027 -  -8.7  -5.69023   AAAATAGTAAAAAAA           GCCAAGGAG AAAT CTCCTCAGC            TTTTTTTATTACTTC 100 34
        corA 3973988 .. 3974007 - -13.6  -5.41143   TATTGGTTAAAAAAA            CACCGAGG AAAT CCTCGGTG             TTTTTTTACTTAAAC 100 31
 JI729_20120 3971274 .. 3971300 - -10.3  -5.48213   TATTCAAAAGAAAAA        GGATAGGAATGC TTTC GC-TTCCTATCC         TCATTTATTATAATA 100 33
 JI729_20115 3970607 .. 3970628 -  -4.4  -5.38326   TGAACTAAATAAAAA           GGCATTGC ACAAGA GCAATGCT            TTTTATTATATATGT  78 60
        dacF 3966748 .. 3966766 - -13.2   -4.7219   CATACGAATAGAAAA             GCGGCAAA ATA TTTGCCGC             TATTTTGATGTTGAA 100 25
     spoIIAA NONE
     spoIIAB NONE
        sigF 3965022 .. 3965049 - -12.2  -5.63504   AACGGCATAAAAAAA        TCGAATAGACAA TTAT TCGTCTATTCGA         TCTTTCATCTGTTTT 100 10
 JI729_20075 NONE
 JI729_20070 3963241 .. 3963265 - -11.5  -5.60993   TTTTTCATAAAAAAA          CATCTGCACCA TTT CGGTACAGATG          TTTTTTACTTATGCC 100 34
 JI729_20065 NONE
      spoVAB NONE
      spoVAC 3961664 .. 3961674 -  -2.6  -3.06696   CCCTCCTTTAAGACA                 TAAA AAT TTTA                 AAGGTATACCTTATT  43 7
      spoVAD NONE
      spoVAE NONE
 JI729_20040 NONE
      spoVAF 3958217 .. 3958240 -  -6.8  -5.75342   TTTTGCTAAAAAAAA          TAAACGGG TGTATAAT CCCGTTTA           TTTTTGTCTTTTTAC  95 23
 JI729_20030 3957310 .. 3957332 - -15.6  -5.28481   TATTCAAGTAAAAAA           GAAGCCCGCC AAT GACGGGCTTC           TTTTTTATACAAGTA 100 30
 JI729_20020 3955786 .. 3955801 -    -9  -5.95286   ATTAAAAATAAAAAA              GAGAGC AAAA GCTCTC               TTTTTCCTTACCTTA 100 38
        ribT 3954951 .. 3954986 - -14.4   -5.4111   AACAATTACAAAAAA    GAAAGCAGAGATAA-TA AAC TACTTATCTCTGCTTTC    ACGAATGTATATTTT 100 24
        scpA 3953229 .. 3953252 -  -3.9  -5.60864   TACACATCAAAAAAA          CCGAATCACA ATTAA TGCG-TTCGG          TTCAATATTTTTTCT  81 111
        scpB 3952585 .. 3952603 - -11.8  -5.76633   TGATATACAAAAAAA             GCTTAGCA AAA TGCTAAGC             TTTTATTTCGATATC 100 28
 JI729_19990 3951597 .. 3951612 -  -4.6  -4.57569   TCATTTTTCCAAAAA              GGGACA GTAT CGCCCC               CTAATCTAGAAATCA  68 38
        nagA NONE
        nagB NONE
        phnF 3948725 .. 3948755 - -12.1  -5.18726   TGCTCATAATAAAAA      TACGACTCATTCCT TATA AGGA-TGAGTCGTA       TTTTTATTTCTTTAC 100 87
        glcT 3946656 .. 3946705 -  -3.7  -3.79295   GAGGAAAAAAAGATA GAACGATAGCTATACAAAGGG-TA GTA TATCCCTTTCTCTAGCTTACATTC CTTACTTTTCTCCAC  54 243
        ptsG 3944460 .. 3944489 -    -8  -3.50572   ATCTATTGTATATAA       TAGGCGATGT TCGGTCAACC ACATCGCCTA        TTATAATTATAAACA  71 56
        ptsH NONE
        ptsP 3942369 .. 3942396 - -13.6  -5.36441   TTCTCATAGAAAAAA        CCTGAGACCGATT TCA AATCGG-CTCAGG        TTTTTTTATTGATTA 100 38
 JI729_19930 3939037 .. 3939055 - -11.8  -6.44931   AACAATAAAAAAAAA             TCGCAACA ATT TGTTGCGA             AAAATTACATTTTTT 100 30
 JI729_19925 NONE
 JI729_19920 NONE
 JI729_19915 3936584 .. 3936617 - -17.1  -3.86835   TTAAAGATGACTAAA     TAAATAAAAGTCCTC ATTT GAGGACTTTTATTTA      CTTTCTTCTAGAAAT 100 19
 JI729_19880 3930425 .. 3930446 -  -9.5  -5.10064   TCTAACATAGAAAAA           CCTCTTTCC ACTA AGAAAGAGG            TTTGAAGTTTATCTT 100 259
 JI729_19875 NONE
        mtnA 3928130 .. 3928151 -  -2.3  -5.64274   TTAGGCATAAAAAAA           CAAGCTA TTAAATTT CAGCTTG            TCTTTCAAATAATGT  74 11
 JI729_19865 3927882 .. 3927910 - -13.4  -5.06816   ACCGCTCAATAAAAA        TAAAGTTTGCTC AAGAA GAGCAAACTTTA        TTTTTTATCCCGAGG 100 23
 JI729_19855 NONE
 JI729_19850 NONE
 JI729_19845 3924728 .. 3924747 -  -6.5  -6.02919   TTACAAAGAAAAAAA            CAGTAAC CCTCAT GTTACTG             TTTAAAAAAACTTAT  95 313
 JI729_19835 3923618 .. 3923633 -  -4.7  -6.09888   TTCCAAGAAAAAAAA              GGAAG TTTCCG CTTCC               TTTTTTCCCATTTCT  93 39
 JI729_19830 3923069 .. 3923088 -  -6.5  -5.29716   TTAATATAATAAAAA            TAGAAGG AATTAA CCTTCTA             TTCTGTCAATGCATA  82 23
 JI729_19825 3921747 .. 3921766 - -12.2  -5.47399   TGAATCGTAAAAAAA            GAAGCAGC AATA GCTGCTTC             TTTTTTATAGTGCTT 100 30
 JI729_19815 NONE
 JI729_19810 3919231 .. 3919259 -    -9  -6.11392   AAAGAAATAAAAAAA        CAGTCAGCAT AATATTTGA ATGCTGACTG        TTTTGTCTTACATTA 100 38
 JI729_19800 3918186 .. 3918214 -  -6.9  -6.41881   TATAACAAAAAAAAA        GACCTTCTTAT TTTATGT ATAAAAAGGTC        TTTTTTTCATTATAC 100 35
 JI729_19795 NONE
 JI729_19790 3917360 .. 3917382 -  -4.7   -5.4492   TACACATACAAAAAA           CCGTCCACA TATAT TGAGGGCGG           TTTTCATTATTATAC  81 35
        malL 3914251 .. 3914281 - -11.3  -5.15969   TGGTAATCCAAAAAA       GCCTTATGCCA AGTTTGAAA TGGCATAAGGC       TTTTTCTTATTTCAA 100 32
 JI729_19770 3910863 .. 3910890 - -14.3  -3.55368   ATGGAAGGGAGAGAA        TTCGTGCCTCT CATATT AGAGGCACGAA         TTTCACCTTATTTTT 100 33
        malC NONE
        malD 3908650 .. 3908678 - -14.8  -4.36262   ATAGGGAGATGAAAA        GAAAAATGGGAC GTAAT GTCCCATTTTTC        ATCCTTTTGTACCTC 100 24
        malR 3907359 .. 3907379 - -12.7   -5.7946   TTTCTAATAAAAAAA            GCTAAGAGT TAA ACTCTTAGC            TTTTTTTATGCATAA 100 31
        kinB 3904278 .. 3904296 -  -4.6  -5.60556   AATATAAAATAAAAA             GTTACC TTCCATC GGTAAC             TTTTATTCCTTATTT  85 28
        nucA NONE
        comJ 3902392 .. 3902419 - -12.9  -5.21236   AACGCATAACAAAAA        TGGGTTATCCT TTTCTC AGGATAACCCA         TTTTTTATTCTTTAC 100 30
 JI729_19705 3895983 .. 3896001 -  -6.1  -5.86976   CTACAAAATAAAAAA             TGTACAT ATGCA ATGTACA             TTTCTGCTTAAGCTT  95 370
 JI729_19695 3895169 .. 3895209 -  -8.7  -3.60234   TCATATATTTTTAAA  GACTTTTATTACAAA CGTGGCGTTTT TTTGTAATAAAAGTC  AAAAAAATGTTACAA  77 80
 JI729_19690 3893953 .. 3893989 - -18.3  -5.72616   ACTTATACAAAAAAA    TAAAACAGTTTGGCCAA GTG TAGGCCAAACTGTTTTA    TTTTTTCTCTTCTTT 100 23
 JI729_19680 3891781 .. 3891792 -    -3   -2.5937   AGACATCCGTACAAC                CTAA TATT TTAG                 TTCAAATGACAAGTT  42 14
 JI729_19675 3889529 .. 3889548 -  -9.4  -5.27769   AGAAAAAAGTAAAAA            CCTCTTAT TGAC ATAAGAGG             TTTTTACTTTTTTCA 100 41
 JI729_19660 3887026 .. 3887048 - -12.1  -5.80727   AAAAATAATAAAAAA           TCCCTTCAG TTTTC CTGAAGGGA           TTAGAGGGGTAAAAT 100 194
 JI729_19655 3885724 .. 3885743 - -10.8  -5.88476   AAAACAAACAAAAAA            TGCACGAA TTCC TTCGTGCA             TTAAAATAAAACATC 100 26
 JI729_19650 3884935 .. 3884973 - -14.3  -3.16822   ACAACAACTACTCAA  TATAGAATAGGAATAGGT AAAT ACCTATTCCTATTCT-TA   TCCCGCTATTTGTAG 100 125
 JI729_19640 3884203 .. 3884224 - -14.5   -5.3671   AATAGAACTAAAAAA           GGTACTGCC ACAT GGCAGTACC            TTTTTTATATGTATC 100 39
 JI729_19635 3883759 .. 3883773 -  -2.8  -2.75845   ACATTGTAAAATTTA               TGTGCA CCG TCCACA               GAGTCACGTCCTTTC  41 99
 JI729_19630 3883186 .. 3883198 -  -2.7  -3.56361   ATATAAAAAATTCAA                CCTAT TTA ATAGA                TGTAATATTCAGTTT  48 81
        abbA 3882922 .. 3882939 -  -2.7  -6.00086   ACAGCACAAAAAAAA             GACTACCA TTC CGGTAG-C             GCTTAATACCCTTTA  86 28
 JI729_19620 3882293 .. 3882319 -    -8  -5.53991   TATGCACGAAAAAAA         GTGACTTCTTCG TTT CTATGAAGTCAC         TTTTCTCACGTTATC  95 36
 JI729_19615 NONE
        dapD 3880433 .. 3880460 - -11.4  -4.87665   CTCTATCTATAAAAA        GCGTAAGAGC CCTTTTAC GCTCTTACGC         TTTTTTTACTTTTTA 100 38
 JI729_19605 3879118 .. 3879157 - -15.3  -3.97331   AAGTTAGTCAAATAA  TTAATAATGAGCAGTGG CTAAAC CCCCTGCTCATTATTAA   AACAGTACAATTAAC 100 147
 JI729_19600 NONE
 JI729_19595 3877373 .. 3877420 - -15.3  -3.70037   CAATCATTATGGAAA TATAAGA-AAAAGGACAATGCC ATGAA GGCATTGTCCTTTTCTCTTATC TTAAAAAGTGTTTAA 100 21
 JI729_19580 3874112 .. 3874150 - -22.1  -3.39327   CCTCTAGAGCGATAA   TAATAAAGAGGCGGAAG TTAAT CTTCCGCCTCTTTATTA   TGAAATGGGTTCCAT 100 47
        pdhA NONE
        pdhB 3870576 .. 3870615 - -18.2  -3.11272   CATTATTATGGAATA  TGTACAAAAGAAACCAGC ATGT GCTGATTTCTTTTGCACA   TGAAAAGCTAAAAAT 100 40
        pdhC NONE
        lpdA 3867783 .. 3867813 - -17.8  -5.50723   TGATGAAAATAAAAA       TAGCCCCTCTCTTA CAA TAAGAGAAGGGCTA       TTTACATTACTTAAA 100 41
 JI729_19545 3867278 .. 3867292 -  -4.3  -3.89215   GGTGACAAAGGGAAA               GCAAA TGAAT TTTGC               CGTTTTTTAGCGAAG  59 102
 JI729_19535 3866513 .. 3866536 -  -2.4  -5.65927   TATTCAAATAAAAAA          CAGCCATATT TATA AGTACGACTG           TTTCAAAATAATTAT  74 37
 JI729_19530 NONE
 JI729_19525 NONE
 JI729_19520 3865832 .. 3865851 - -13.6  -5.18357   CAATTTATTAAAAAA            GCGCCTAC ACAT GTAGGCGC             TTTTTCTTATTATTA 100 38
 JI729_19505 3862737 .. 3862756 - -10.8  -4.51378   ATCGATAGTAGAAAA            CGGACAAT TTAT ATTGTCCG             TTTTTAGTTGTTATC 100 80
 JI729_19495 3861657 .. 3861676 -  -8.6  -5.36441   TGTTCACAGAAAAAA            CGAACCCT TTAT AAGGTTCG             CACCAACTAATTTTT 100 57
 JI729_19490 3860793 .. 3860819 -  -7.4  -4.70626   CAATAACGCTAAAAA         GTAAGAAGCT TATACAC AGCCTCTTAC         TTTTTTTGTTGCTCT  82 40
        typA 3858584 .. 3858607 - -15.4  -6.17669   AACAAAATAAAAAAA          CAACGCCCTT TATA AAGGGCGTTG           TTTTTTTATTTTTAC 100 37
 JI729_19475 NONE
 JI729_19470 3857835 .. 3857876 -  -8.4  -4.12456   AGATGATTGGTAAAA TGTAAATAAGTCCTTA-CT CATAT AGATAAGGACTTATTTATA TTTTTCTGGTTCACG  81 17
 JI729_19460 3856822 .. 3856857 -  -9.2   -3.3506   TTTAAATTTGTAGAA    CAAGGGTTTCATCCATA AAA TATGGACG-AACCATTG    TTATAATTATATGTA  78 199
 JI729_19455 3855426 .. 3855457 - -14.6  -3.72984   TTACAATTATTTAAA      GAAAAGGAGTGAGC TTAA GCTCACTCCTTTTT       ACAATAAATCTGCTG 100 24
 JI729_19445 3854444 .. 3854466 - -13.6  -5.42975   TTATACAAATAAAAA           GCTCAAACTA ATT TAGTTTGAGC           CCCCTTATTTGAACC 100 43
 JI729_19440 3853151 .. 3853176 -  -9.1  -5.93252   TTTAAAAATAAAAAA         CACATCATGCT CTAA AGCACAATGTG          TTTTTATTTTACAAC 100 29
         pyc 3849381 .. 3849400 -  -8.6   -5.4505   TTTTGCAATAAAAAA            GAGCTGTA TTTA CACAGCTC             TTTTCTTATTTTAGT 100 36
        ctaB NONE
        coxB NONE
        ctaD NONE
        ctaE NONE
        ctaF 3842934 .. 3842958 - -10.8  -3.27771   CTCATAATATGAAGA         GGGAGC-TGTG ACAA CACAAGCTCCC          TTATTTTTCACTTTT  87 40
        ctaG 3841963 .. 3841982 -  -6.4  -5.77571   ACTAAAAAAGAAAAA            GCGCATGG AATC CCATACAC             TTTTTTACTTAGTCT  95 30
 JI729_19395 3840714 .. 3840738 - -17.3  -5.14163   ATTGATTAACAAAAA          CAAGCGCATCA ATA TGATGCGCTTG          TTTTATTTCCCTTCC 100 41
 JI729_19385 3838963 .. 3839000 - -11.3  -6.13503   TAGTAAGAAAAAAAA   GGCGCATGGTTCGCCTA TTTT TAGACGATTCATGCACC    TTTTTTTCTGCTATT 100 128
 JI729_19380 NONE
 JI729_19375 NONE
 JI729_19370 3837534 .. 3837563 -  -5.2  -4.68908   CTTACTCAAAAGAAA       GATATAACGTAA CTATTT TTACACTATATC        CGTACACACTTATAC  72 35
 JI729_19365 3836997 .. 3837013 - -10.1    -5.055   CCAACTTCTAAAAAA              CGGGGTA CAT CACCCCG              TTTTTTTACAACCAC 100 18
 JI729_19360 3836580 .. 3836603 -   -11  -4.74504   ATTTCAAGTGAAAAA          TCCCCGGCTA AATT TAGCAGGGGA           TTTTTTCTATTAGCT 100 35
        rsmD NONE
        coaD 3834610 .. 3834629 -  -9.3   -5.4433   ACATATAAAGAAAAA            CCCCGTT CACTTT AACGGGG             TTTGAAACTTTTCTT 100 12
 JI729_19335 NONE
 JI729_19330 3831455 .. 3831473 -  -9.6  -5.25803   AATTCCTATAAAAAA             CCTCTCTA TTT CAGAGAGG             TTTTTTCCTTATCCA 100 12
 JI729_19320 3829536 .. 3829548 -  -3.3  -2.55668   TATTTTCATATGAAG                GCCTG AAC CAGTC                TTCCGATTATTTGTC  42 32
        rpmF 3829281 .. 3829308 - -15.8  -6.10295   TTAAGACAAAAAAAA        TAAACGCAGAAG ATAT CTTCTGCGTTTA         TTTTCCCGCAATTAC 100 37
 JI729_19310 3828642 .. 3828699 - -13.9  -3.93401   GTTACAAACGAAGAA TCGGCTTAAGAAATAAAAAAACAGCTGT ATA ACAGCTG-TTTTTTATTTCTTAAGCTTC TCTAACTTCTCATTC 100 10
        panE 3826958 .. 3826971 -  -5.3  -2.56596   TCTCTCACCAATCCA               CATTG TAGT CAATG                TTTCACGTAAAAGCA  51 52
        bshC 3825275 .. 3825304 - -13.1  -5.13741   TCAACGGAATAAAAA       TAAAATCCTGCTC CAAA GAGCAAGATTTTA        TAGTTTTATAACATG 100 23
        rsmH NONE
        ftsL NONE
 JI729_19280 3821365 .. 3821412 -  -3.6  -2.90763   GTTACATTTGATACA CGCATATCGGAACAAGCC TCCCTTACGCCT AGCTTGTTCCAATATATG CTTGTACTTATTTAA  46 64
 JI729_19275 3819314 .. 3819351 - -10.8  -3.14211   ATCTTTTTTTAGTAA   GCAACACATTACCTCCT ATATA AGGAGGTAA-GTGCTAC   TGACCTATTTATGAA  85 127
        murE NONE
        mraY NONE
        murD 3815400 .. 3815435 - -17.9  -3.05384   TTTTGCCCTATGTAA    CAAAACATCAGTAGG TGTTAG CCTACTGATGTTTTG     ATTTACTTTATATAA 100 33
       spoVE 3814241 .. 3814259 -  -9.6  -4.86133   CACACATACGAAAAA             CCCTGTCT TAT AAACAGGG             TTTAGTAGCGAGAAT 100 27
        murG 3812985 .. 3813002 -  -6.3  -2.72839   AATTAGGCGGAATCA             GGATGTC AGTA AACATCC              TATTAGTGAAAGATA  58 86
        murB 3811872 .. 3811896 - -14.4  -4.21607   CCTATGTAACATAAA          GAACGGCATG TTCCT CATGCCGTTC          TTATCTTCTTATTAT 100 74
       divIB NONE
        ftsA NONE
        ftsZ 3808114 .. 3808130 - -12.3  -6.25578   ACCAAATAAAAAAAA              GACCTGC TTA GCAGGTC              TTTTCCATTTAAAAA 100 70
     spoIIGA NONE
        sigE 3806228 .. 3806267 - -13.8  -4.08221   CCTAATACAACTAAA  TAGAATAAGACCAGCC TACATAAC GGCTGGTCTTATTCTT   TACACCATTTTATTA 100 25
        sigG 3805306 .. 3805329 - -15.4  -5.05601   TATTACATATAAAAA          GGTCTCACCA TAAT TGGTGAGACC           TTATCCTTGAATCGT 100 26
 JI729_19210 NONE
        pgeF NONE
 JI729_19200 NONE
 JI729_19195 NONE
 JI729_19190 NONE
 JI729_19185 3801721 .. 3801738 -  -4.1  -4.36914   TTTTCTTCGACAAAA             TAGGAGG ATTT CCTTCTA              AAAAACCAATCATTT  63 35
      divIVA 3800860 .. 3800896 - -18.2  -5.52096   AAACGGAATAAAAAA    GAGACCTTCTCATCCC AAAAA GGGACGAGAAAGTCTC    CCGCGGTACCACCCT 100 281
       ileS2 3798010 .. 3798032 -    -7  -5.84381   CCATCAACAAAAAAA           CTGACCGC ATCAATA GCAGTCAG           TTTTTTATTATTTTA  95 33
 JI729_19170 NONE
        lspA NONE
 JI729_19160 3795907 .. 3795931 - -10.8  -5.63504   AATGGTATAAAAAAA         GTCCTCTCAGC GTGT GC-GAGAGGAC          TTTTGAAAAAAGGGT 100 153
        pyrR 3795208 .. 3795231 -   -14   -5.7946   TTTGCAATAAAAAAA          CTCTTTGTGC CTGT GCACAAAGAG           TCCTACACTTTCGTA 100 107
        uraA 3793806 .. 3793827 - -10.2  -4.03995   CTTTGTATAAAAATA           CCCTAGTC GTGTGA GACTAGGG            TGCAAGAAAGAAGCC  95 81
        pyrB NONE
        pyrC NONE
        carA NONE
        carB NONE
        pyrK 3786485 .. 3786499 -  -2.1  -2.62515   AATCTGTTCATAGTA               CAACC TCCCC GATTG               GAAATACTGGTCCGT  39 3
        pyrD NONE
        pyrF NONE
        pyrE 3784187 .. 3784208 -   -13  -5.75478   AATGATATAAAAAAA           CGACCGCG TTCCCC CGCGGTCG            TCTTTTTTCGTGTTA 100 38
 JI729_19085 3779091 .. 3779142 - -16.2  -4.62054   GTAATGAAATTAAAA GCGTAAATAAAAAAATGCGTTGCT TATA AGCAACGCATTTTTTTATATTCGT TCACACTAATTCATA 100 31
 JI729_19075 3774498 .. 3774523 -  -8.4  -4.90013   TAACTCAATGAAAAA         GGTAATAGAG ACAAGG CTCTACTACC          TTCTGTAAATTATAT  90 60
 JI729_19070 NONE
 JI729_19065 NONE
         gmk NONE
        rpoZ 3772325 .. 3772352 - -10.8  -5.40072   CCTTTCGTAAAAAAA        TAACAACCTACT TGTA AATAGGTTGTTA         CCGTTACATAGAAAA 100 79
       coaBC NONE
        priA NONE
 JI729_19040 NONE
 JI729_19035 NONE
        rsmB NONE
        rlmN NONE
 JI729_19020 NONE
        pknB 3761942 .. 3761994 - -19.5  -2.90075   GCTTTTTGAATCATA TATTTTTGCCTGCTATACCGTCCAC TTT GTAGACAGCATAACAGGCAATAATA ATAAGTAGACTTTCA 100 44
        rsgA NONE
 JI729_19005 3760156 .. 3760181 - -11.9  -4.62069   CTTCCATTGTAAAAA         GGCAATCTGCC ATTC GGTAGATTGCC          TTTTTACATATTTTT 100 82
 JI729_19000 NONE
       spoVM 3759280 .. 3759293 -  -8.1  -6.22691   TAATAATAAAAAAAA               GAGCC GATA GGCTC                TTTTTTTACTATAAC 100 73
 JI729_18985 NONE
 JI729_18980 3756500 .. 3756525 -  -8.3  -5.43514   AAAACAAGTAAAAAA         GAGCCTCACTA TTAG CAGCAAGGCTC          TTTTCTCTCTTCAAT  95 141
        recG 3754272 .. 3754298 -  -3.9  -3.16033   TAATCATTAAAAGTA        GAATGCAACAAA AACT TTTGTTG-ACTC         CCTTTAATCGAGCTT  47 29
        fapR NONE
        plsX NONE
        fabD NONE
        fabG NONE
        acpP 3750597 .. 3750616 -  -7.8  -4.01137   GATATAAGCCAGAAA            GCCCCGCT AAAA AACGGGAC             TTCACTTAAGCATTA  76 38
        rncS 3749804 .. 3749832 - -15.4  -3.36327   TCATTCTATGCATAA        GGAATCCCCCTC ATTCA AAGGGGGATTCC        TTATAGTTGTTCTTT 100 26
         smc NONE
        ftsY 3745087 .. 3745105 - -10.3  -4.96848   TTTTTTATAGAAAAA             GAAGCGG AAATA CCGCTTC             TTTCGCTTATACTTC 100 32
 JI729_18930 NONE
         ffh 3743216 .. 3743226 -  -2.6  -3.00022   TTTATTTCACACAGA                 TAAT TAT ATTA                 GCAAAAAGACTATTG  42 83
        rpsP 3742913 .. 3742931 -  -3.9  -2.71364   TCATTGCCTCAATTA             CTTACCT TGTTT AGATAAG             TGGAATTTCTCCATG  44 4
 JI729_18915 3742636 .. 3742658 -  -9.8  -5.12707   TTAAATGTTAAAAAA           GGGAGAGGAA TAA CTCCTCGCCC           TTTTTACGTTTATTG 100 35
        rimM NONE
        trmD 3741221 .. 3741243 -  -4.9  -3.06315   GGAACATCGTTAATA          CG-GCTACTG ATTT CAGTAGCACA           AATGTTATAATAGCA  52 80
        rplS 3740772 .. 3740797 - -13.4  -4.65838   TATAGATTGGAAAAA         GGGAGCTTGT GCATTT ACAAGCTCCC          ATACATGTCTTATCG 100 35
        lepB NONE
        ylqF 3739225 .. 3739242 -  -5.5   -5.2853   TATCCAAAAAGAAAA             GACGCAC AAAC GCACGTC              TTATACTTCTTCTAT  81 26
 JI729_18885 3738394 .. 3738415 - -10.3  -6.09196   GCCAAAATAAAAAAA           TAAGCTGTA TATT TACAGCTTA            TTTTTGAATCATATC 100 23
        sucC NONE
        sucD 3736102 .. 3736125 -  -8.9   -4.7657   GAAAAAGTCTAAAAA          GACACCCTC AAGTAA GAAGGTGTC           TTTCAACAGATTAAT  91 36
        dprA 3735151 .. 3735165 -  -2.9  -2.77344   CCATTTGTCAATAAT               TGTTT AATAA AAACA               TAAAAATATAAGGTT  41 39
        topA 3732941 .. 3732960 -  -8.6  -5.40072   TCTTCCCGAAAAAAA            TGTGAGCA GTTA CGCTCACA             TTTGTTGTTCTTCTT 100 21
       trmFO 3731556 .. 3731586 - -14.2  -4.18488   ACTCACCTCAATAAA       GGCTACTAAATCGT ATC ACAACTTAGTAGCC       TTTGCAAGAAATTTA 100 42
        xerC 3730588 .. 3730600 -  -2.7  -3.55444   GTTGTAGCGTGGAAA                TTTCC CAT AGAAA                AAACTCCTTTATTTG  48 63
        hslV 3730027 .. 3730039 -  -3.4  -2.96184   GAGTAAAATGTAAAT                GCAT ATAAA ATGC                CTCCCTTACGATTCT  44 39
        hslU NONE
        codY 3727751 .. 3727770 - -12.2  -5.71712   TTGCACATAAAAAAA            CTCTCCTC GATT GAGGAGAG             TTTTTTACAAATTAG 100 37
        rpsB 3726690 .. 3726718 - -11.1  -5.07567   TTATACCTTAAAAAA        GGTGATAAAAGGC CGA ACCCCTTATCACC        TTTCCAACTTTGTTA 100 38
 JI729_18830 3725712 .. 3725730 - -13.2   -5.0538   CTTTATTTTAAAAAA             GGGAACAC AAT GTGTTCCC             TAATCTGTATTAGTT 100 35
        pyrH NONE
         frr 3724349 .. 3724369 - -11.9   -4.7416   CTAAAAGTGTAAAAA            GACCCCCTT AAG AAGAGGGTC            ATAATTGCGAAGTTA 100 47
        uppS NONE
        cdsA NONE
 JI729_18805 NONE
        rseP 3720211 .. 3720236 - -11.2  -4.29738   TTACACGCAGTAAAA         CCCCTCACCT CGAGTT AGGTGAGGGA          TTTTATTCTACGAGC 100 69
        proS 3718444 .. 3718464 -  -9.7  -4.05321   TACAAAGAAAGAGAA            GGTACCCCA TTA CGAGGTACC            TCTTCTTATTTTAAA  91 31
 JI729_18790 3713939 .. 3713956 - -11.3  -3.96093   GATAGTAACACGAAA             GAGTGGG TTTC CCCACTC              TTTTCTTTACACAAT 100 113
        rimP NONE
        nusA NONE
 JI729_18775 NONE
 JI729_18770 NONE
        infB 3709440 .. 3709463 -   -14   -2.9175   TACACTCGAATGAGA          GTGAAGCGAT AATC ATCGCTTCAC           TTCTTCCATAATGTA 100 14
 JI729_18760 NONE
        rbfA 3708780 .. 3708801 - -11.7  -5.08824   TTTGCATTGAAAAAA           TGGATAGAC AAAT GTCTATCCA            TTATTCTTCACGTTT 100 26
        truB NONE
        ribF 3706720 .. 3706734 -  -2.7  -3.20435   CCAATTACCTAGCAA               GCGTC GGTGA GTCGC               AATGCCAAGCAATGG  43 68
        rpsO 3706376 .. 3706405 - -15.9  -3.06501   TATATTTTTACCTAA       CAAAAAAGCGGGA ATAT TCCCGCTTCTTTG        ACTATCGACGTAAGC 100 27
         pnp 3704087 .. 3704101 -   -10   -5.9218   TACATAACAAAAAAA               GCCAGT TAA ACTGGC               TTTCGCTTATTGCTG 100 32
 JI729_18730 NONE
 JI729_18725 3701668 .. 3701700 - -15.1  -5.96219   TATGTATAAAAAAAA      TAACCTTCTCTCATT TAA AAAGAGAGAAGGTTA      TTTTCAGATACATCG 100 51
 JI729_18720 3701319 .. 3701337 -  -9.6  -5.76633   GTAGATACAAAAAAA             GATGACCA AAA TGGCCATC             CTTCACTCCGAATTT 100 28
        dpaA 3699755 .. 3699771 -  -4.4  -2.79518   GGAAAAGTGGCAAAG              GCTCGA TGATT TCGAAC              TTGTGCTTTACCCTA  48 521
 JI729_18700 3697841 .. 3697855 -  -8.6  -4.03995   TTTCGTATAAAAAGA               GAGGAA CTA TTCCTC               AACGTTTGCTTTTAC  83 17
 JI729_18695 NONE
 JI729_18690 3696857 .. 3696876 -  -7.9  -2.57132   CTTTCTGGTCATAAC            GACAAGC ACAGTG GCTTGTC             CAAATGATTTATATA  65 83
 JI729_18685 3696421 .. 3696431 -    -4  -3.11178   TAATTAATCCTAAGA                 TCTT TGC AAGA                 CCGTTTGTCTATCAC  49 63
 JI729_18680 3694983 .. 3694999 -  -2.3  -5.31275   TTTTATTATAAAAAA              CATTTTC AAG AAAAACG              AGCATATATTGTTAT  68 388
 JI729_18675 NONE
 JI729_18670 3692795 .. 3692825 -  -4.8  -4.59882   CTAAAAAAGAAATAA       GCAATGATTAGATT TTA AACCTAGTCATTTC       TTTATCCATTGCATC  68 2
 JI729_18665 3691932 .. 3691960 -    -9  -4.88388   AGAAGTCTACAAAAA        TATCCTCCAG TCAATTACT CTGGAGGATA        TTCATATTTACATAC  93 99
 JI729_18655 3689521 .. 3689571 - -11.2  -4.58685   AAACGTTTCCAAAAA CGACTCAACCATCGAGCTCCGATA GAA TATCGAATCTCGATGGCTGCTTAG TCTTTTTAATACTGC 100 284
 JI729_18630 3687063 .. 3687088 - -11.9   -4.3255   GTTGCAATTAACAAA         GCCGACTCATA TCAA TTTGAGTCGGC          TTTTACTATTACTTC 100 34
 JI729_18615 3684384 .. 3684412 - -15.5  -3.45054   TTCTATAACTTAGAA        TCAGAAGGAGTAT ACA ATACCCCTTCTGA        TCTTAATAACGTTAA 100 104
         asd NONE
        dapG NONE
        dapA 3681118 .. 3681140 - -10.7  -5.60689   GCATATAATAAAAAA           TGACCTAGT TCTAC ACTAGGTCA           TTTTTTATTAACGAG 100 33
 JI729_18595 3678719 .. 3678734 -    -9   -6.4275   TAAAAAGAAAAAAAA              TCACCC ATAA GGGTGA               TCCTTTTTATACTTC 100 32
        tepA NONE
 JI729_18585 3677613 .. 3677631 -  -7.4  -4.55908   AATAAACAGAAGAAA             GCAGCC TACTCAT GGCTGC             TCAACCGTCTTGTTT  81 83
 JI729_18580 3675066 .. 3675089 - -12.6  -5.40625   ACACTATATAAAAAA          GCCTAATTGT AAAA ACAATTAGGC           TTTTTTTAAGAACTT 100 31
 JI729_18575 NONE
 JI729_18570 3672617 .. 3672645 - -17.7  -2.99947   GAAGTTTTATACATA        CAAAGGTTAGTTC TAT GAACTAACCTTTG        CTATTTCTCTATTTA 100 38
 JI729_18565 NONE
 JI729_18560 NONE
 JI729_18555 3668956 .. 3668975 -  -7.8  -5.09225   ATTCTATGTAAAAAA            GCCCACAC TAAT GTGCGAGC             TTTTTTATACTTATA  90 47
 JI729_18550 NONE
 JI729_18545 3666175 .. 3666214 - -14.6  -4.13903   CACACAACTAAATAA  TACCCTCATCTTACAATT TTTC AATGATAAGATGAGGGTA   TCTTTAAAATTTTAT 100 37
 JI729_18540 NONE
 JI729_18535 3665061 .. 3665085 - -17.3  -5.74122   TATTATACAAAAAAA          GTAGAGAGGAG AAT CTCCTCTCTAC          TTTTACTTATGTTGT 100 28
 JI729_18530 NONE
 JI729_18525 3663212 .. 3663228 - -10.9  -5.47218   GTTCATCGAAAAAAA              GTCATCG AAG CGATGAC              TGTTATTGTGCTGGT 100 28
        pgsA NONE
 JI729_18515 3661318 .. 3661343 -  -7.7  -5.81032   TAACCGTAAAAAAAA         CTAGAAGAAAC TTAT ATCTCTTCTAG          CTTTTTATATAAATG 100 11
 JI729_18505 3659795 .. 3659820 - -13.5  -5.74122   TAGTAGATAAAAAAA         TAAAAGACACG AGGC CGTGTCTTTTA          TTTTTTTAATCAAGA 100 31
         rny 3657762 .. 3657784 - -13.6  -5.80817   TCCAACACAAAAAAA           TAAAGTGGTG TTT CACCACTTTA           TTTTGCGTATTCCAC 100 23
 JI729_18495 NONE
       spoVS 3656379 .. 3656407 - -19.1  -4.91109   CCTCCATTATAAAAA        CAACCTGTTTGCA TAC TGCAAACAGGTTG        TTTAAACTTAACGAG 100 33
 JI729_18485 NONE
 JI729_18480 NONE
 JI729_18475 3652566 .. 3652584 -   -11  -5.71712   TTGTACATAAAAAAA             GGTTGCCA AAT CGGCAACC             TCCTCTTCTTACATT 100 39
        miaB NONE
 JI729_18465 3650181 .. 3650201 - -12.7  -6.24157   ATCCACAAAAAAAAA            GAGATGTCA ATA TGACATCTC            TTTAACAACCACAAT 100 27
 JI729_18460 3649499 .. 3649533 -   -16  -2.79878   GCCACTTATGTAAAG     TAAAAAGCTAGGAAGA ACT TCTCCCTAGCTTTCTA     TTACTCTTCTTCTGC 100 26
        mutS NONE
        mutL 3644668 .. 3644718 - -16.5  -2.90227   GTTTAACTATTAAAT CTACATATTAAAAGGGAGCAACA GTAAA TGTTGCTCCCTTTTGAAATGTAA TCTATTCACTCTACA 100 36
 JI729_18440 3640897 .. 3640920 - -11.1  -4.84527   TCTATATATGAAAAA          GGAGCAACT TATTAC AGTTGCTCC           TTTTACTTTCTTATA 100 83
 JI729_18420 3633900 .. 3633919 - -10.8  -4.03085   TTAGAAAAATTTAAA            GGAACTTC ATCT GAAGTTCC             TTTTACTTATTTTAT  95 32
        plcA 3632719 .. 3632741 - -10.7  -5.46706   ATTGGAAAATAAAAA           GAAGCGATA TATTT TATCGCTTC           TTACTCTCATCATCT 100 41
 JI729_18410 NONE
 JI729_18405 3630372 .. 3630397 -   -12  -5.61881   CTTTAAAAATAAAAA         GCAACTGATC ACTTAG GATCAGTTGC          TTTTTTCACACGATA 100 46
 JI729_18400 NONE
 JI729_18395 3628380 .. 3628392 -  -2.7  -2.96216   TTTCACTATCACACA                TCCAT ATT ATGAA                ATCTCATTTAGCGTG  42 19
 JI729_18390 NONE
 JI729_18385 NONE
 JI729_18380 3626834 .. 3626851 -    -7  -5.27709   GGATAAAAAAATAAA             GAGACC ATTATA GGTCTC              TTCTTAAGCATACTC  84 29
 JI729_18365 NONE
 JI729_18360 NONE
 JI729_18355 NONE
 JI729_18350 3621568 .. 3621611 - -18.6  -4.20918   GTGAATTGGAACAAA TATAGTAAAAAGGAAAGAAG ATAC CTTCTTTCCTTTTTACTATT TACATTTCTATTACT 100 36
 JI729_18340 3617431 .. 3617442 -    -3  -3.66117   CTAACCATATAAATA                TATG TGCT CATA                 ATTTCTCCTTAAAAT  50 165
 JI729_18335 3616818 .. 3616852 -   -11  -5.81412   TCTATTCAAAAAAAA     GACTTTGCTATAAAAG TAA CTTTTACAACAAAATC     CATGCAACTAATTTT 100 39
 JI729_18330 3616153 .. 3616198 - -23.7  -5.09204   ACAGCTTAATAAAAA CAGAAACACCCTATTTACGAC TCTC ACCGTAAATAGGGTGTTTCTG TTTTTATCTCGCAAT 100 54
        pepT 3614034 .. 3614059 - -12.7  -5.59357   ACTATATTAAAAAAA         CCAAGTAGCAC ATTC GTACTACTTGG          TTCTTTTTTAAGCTT 100 33
         xth 3611063 .. 3611094 -   -19  -5.64006   ACTGAATTAAAAAAA      GAAGTATCTCCCTA ATAT TAGGGAGATACTTC       TTTTTTTAGAAATTT 100 31
 JI729_18295 NONE
 JI729_18290 NONE
 JI729_18285 NONE
 JI729_18280 NONE
 JI729_18275 3606080 .. 3606105 -  -9.9  -5.24989   CTACATATCAAAAAA         GGTTATGGAATG TTT CAT-CCATAACC         TTTTTTCCTATACGT 100 33
 JI729_18270 3605529 .. 3605574 - -10.7  -5.11112   AAAGTTCAATAAAAA GAAACAAGAATAAGCGGGGA TTACCCG CCCCCGCTTATTCTT-TGTC TATAATATTAAAAAC 100 88
 JI729_18265 3604981 .. 3605003 -  -8.5  -6.23545   GGTAAACAAAAAAAA           CAAGCCAGT GACAT ACTAGCTTG           TTTTTACGCTTTTGA 100 29
        copZ 3604546 .. 3604575 - -11.7  -4.33105   TAATTATTAGCAAAA       TAAATCGTACTTC GTTT AAAGTACGATTTA        TTTCCATATCTAAAA 100 45
 JI729_18255 3602024 .. 3602043 -    -8  -5.85737   ATACGAACAAAAAAA            CAATACTT ATTC AAGTATTG             TTTTTTAATTCTATT 100 61
 JI729_18250 3601431 .. 3601456 - -13.5  -5.07971   TAAAATAATGAAAAA         TATCCTTCTCA TTTA TGAGAAGGATA          TTTTTTTCATAACAT 100 12
 JI729_18235 3598974 .. 3599006 -  -4.2  -4.96762   CATATAGGATAAAAA     CAGCAATAGGTTCCT TTAT AGGT-CCTATTGTTG      TTTTTTATTTATGAA  70 127
        gabP 3596165 .. 3596179 -  -4.3  -3.36631   AAAATAAGAAAATTA               GAATC GAACG GATTC               CTCATTCTTACTTTT  50 8
 JI729_18220 3595486 .. 3595514 - -10.5  -6.04953   AGACAAAGAAAAAAA        TCCTTCTTAATAA AAC TTCTTAAGAAGGA        TTTTATCGCTTTATT 100 200
 JI729_18215 3594804 .. 3594823 -   -10   -5.7946   TGCCTAACAAAAAAA            TCCCAGCC TACA GGCTGAGA             TTTTTTATTGATAAT 100 30
 JI729_18210 3593500 .. 3593533 - -13.4  -6.01369   TAAATAACAAAAAAA     GAAACCCATTTGAT CGTTAT ATCAAACGGGTTTC      TTTACTCGATTCACT 100 40
 JI729_18205 NONE
        pfkB NONE
 JI729_18195 3589823 .. 3589847 - -14.4  -5.06414   TTTTTGTAATAAAAA          GAGAGCAGCT ACTAA AGCTGCTCTC          TTTTCACTTGTTATT 100 36
 JI729_18190 3588507 .. 3588536 -  -9.3  -4.94222   AATAATCCATAAAAA       GCGGCTGCTTACA TAAA TTCAAGCAACCGC        TTTTTATATTAATAT 100 48
        miaA NONE
         hfq 3586825 .. 3586842 - -11.3  -6.02919   TGACAAATAAAAAAA             GAGCGAG AAAA CTCGCTC              TTTTTTTGTTATGTA 100 54
       spoVK 3581409 .. 3581434 - -13.4  -2.76281   TTATACACAAAAATC         GACGCACAGT TTATGT ACTGTGCGTC          TCCTCTTCGAGCATC 100 10
        hflX NONE
 JI729_18140 3577872 .. 3577889 -  -9.1  -5.21709   TTTTATACGAAAAAA             GCTGCCG AAAT CGACAGC              TTCCCTTTAAGAAAT 100 32
        glnR NONE
        glnA 3575903 .. 3575927 -   -13  -5.26875   TTGGGAATTAAAAAA          CCCTTGATAC GAGTT GTATCAAGGG          TTCAAGCCTCTTAGT 100 36
 JI729_18120 3574485 .. 3574495 -  -2.6  -3.12402   TAAATCATCATTCAA                 TAAT TCG ATTA                 TAGCGTTACATTTTA  43 59
 JI729_18115 NONE
 JI729_18110 3573283 .. 3573296 -  -4.5  -3.48276   TTTTTTCTTATAGAA               TCCGC TGCA ACGGA                TTCTTTTCTTATGCA  55 91
 JI729_18105 3572180 .. 3572197 -  -4.1  -4.15328   AACTGAAATTACAAA             TGGTTCA TACT TGATCCA              AACATTCACTACTAT  59 150
 JI729_18100 NONE
 JI729_18095 3571420 .. 3571443 -  -8.2  -5.18726   CTTTCACAACAAAAA          GAGCAACCAT AAAA ATAGTTGCCC           TTTCGTCGAAATCTT  93 109
 JI729_18090 3570216 .. 3570233 -  -4.1  -5.00642   TAAGTGATATAAAAA             GGCACTT AAAA AAGCACC              CTTTCATAACATTTT  70 95
 JI729_18085 3569306 .. 3569323 -  -4.1  -5.18355   TTCAAAAATTAAAAA             GAATCAC ACGA GTGACCC              TACTCTAATATCCTT  75 39
 JI729_18080 3568929 .. 3568982 - -16.4  -2.80935   ACCTTATTCACTATA GCTAATGAGAAAAAGCCCCAATAC TTATCG GTATTAGGGCTTTTTCTCATTATT ATATATTAATTGAAT 100 88
 JI729_18075 NONE
 JI729_18070 NONE
 JI729_18065 3566932 .. 3566969 - -14.5  -5.54403   AAAAAATAATAAAAA   GAAGATAATTACCTTAT TTAT ATACGGTAATTATCTTC    TTTTTTGTATTTTGA 100 67
 JI729_18055 3565480 .. 3565491 -    -3  -3.24146   CCTTCTAATCAAAAC                TGAT TATT ATCA                 TACAATAGTTACTCT  47 34
 JI729_18050 3565196 .. 3565212 - -12.3  -5.72622   TTTACAAATAAAAAA              GATGGGC TTC GCCCATC              TTTTAATTTAATTTT 100 28
 JI729_18040 3562415 .. 3562455 -  -4.9  -4.19817   TCTATGTATTCAAAA CGGCAAACTAACTGAAAA CATCCC CTTTCAGCTAG-CTGCCA  TTTCCATATGTATTA  64 38
        phnC NONE
        phnE NONE
        phnE 3559988 .. 3560004 -  -5.1  -5.69068   TAAAAACATAAAAAA              GCATCTA ACT TCGATGC              TTTTCAAATAAGTTA  91 38
         tkt 3557699 .. 3557717 -  -7.4  -5.04597   ATTTACATAGAAAAA             CCTCTCCA TGC CGGAGAGA             TTTTTCTGAAATCAT  86 40
        sirA NONE
 JI729_18010 3556807 .. 3556825 -  -8.9  -5.06961   ACTAACAAAAAGAAA             GACACTC TTAGC GAGTGTC             TTTTAGCGCTTATTT 100 35
 JI729_18005 NONE
 JI729_18000 3553189 .. 3553207 -  -9.6   -5.8901   ATACAAAATAAAAAA             GACCTTGT ATT ACAAGGCC             TTTTGCAAACTCACT 100 16
 JI729_17995 3551987 .. 3552006 -  -3.4  -4.65078   ATATTTTTAATAAAA            GGCACCTC TGAC GGGGCACC             TTTTATTTTCACTCT  62 39
 JI729_17990 3550824 .. 3550835 -  -2.2  -4.65446   ATTAGACATATAAAA                TGCC ACGT AGCA                 TAGCGTTCAGAAAGA  58 50
 JI729_17985 3550273 .. 3550293 - -11.3  -5.93252   TTGAAAAATAAAAAA            GAAGCTATA ACA TATAGCTTC            CCTCTACGTTTCTTT 100 39
 JI729_17980 3549877 .. 3549905 - -13.4    -4.128   ATCCTTACATACAAA        TAAAAAGCATCC TAGAC GGATGCTTTTTA        TTTCAATAATATGTA 100 42
 JI729_17975 3548692 .. 3548720 - -16.2  -5.06816   ATTTTCGAACAAAAA        GAAAGCTGACCA TAAAT TGGTCAGCTTTC        ATATCCGATCATATT 100 373
 JI729_17965 3547929 .. 3547964 - -13.6  -2.87132   CTTGTCTTGGATACA    TTAAAGAAGCAAGTAT TTAC ATACTTGCTTCTTTAT     CTATATATTGGCACA 100 6
 JI729_17950 3545738 .. 3545787 - -25.5  -5.47821   ATCGAGCTAAAAAAA GAACAATAAAGCGGAAATGCAAC TTAA GTTGCATTTCCGCTTTATTGTTT AACAAGGTGTACTTT 100 78
 JI729_17940 3544393 .. 3544408 -  -7.6  -5.63645   GTAAAATAGAAAAAA              GCATGA TTTC TCATGC               CCTTTCTCTAAACCG  95 20
 JI729_17935 NONE
 JI729_17930 3542422 .. 3542455 - -15.4  -5.61596   ATTCTCATAAAAAAA     GCCGTTCAAAGTGC ATCTCA GCACCCTGAACGGC      TTTTCTTATTAAGTT 100 34
        ccdA NONE
 JI729_17910 3538384 .. 3538404 - -11.9  -5.40464   CACTATAAATAAAAA            GACAGCGTC AAA AACGCTGTC            TTTTTATTTGGTACA 100 51
 JI729_17900 3529397 .. 3529419 -  -3.5  -3.38725   AAGCTTGAACAAAAG           CCAATAGAA CTCAC TCCTATTAG           GATAAAAATTTTTAT  50 58
 JI729_17895 3528320 .. 3528340 -  -8.4  -5.52384   CCCTCATGAAAAAAA            GATTGCTA ACTTA TAGCAATC            TTTTTTAACTTACAG  95 30
 JI729_17880 NONE
 JI729_17875 3526053 .. 3526068 -    -9  -5.93252   GTCAAAAAGAAAAAA              GCTAGC ATTT GCTAGC               TTTTACACGTTTTCT 100 28
        hutP 3524396 .. 3524447 - -21.2   -4.4874   CTTAAAAAGGCAAAA GGGGACCTTATCTTTTTAAGACAG ACTT CTGTCCTAAAAAAGTAAGGCCCCC TTCTAACTAATAGAC 100 51
        hutH NONE
        hutU NONE
        hutI 3519893 .. 3519907 -  -2.8  -3.34517   ATTTTTCTTTAAATA               GTGG CCGTGCT CCAC               GATTGTTCACCTCTT  45 4
        hutG 3518871 .. 3518898 -  -9.3   -5.0916   CCTTTAACACAAAAA        CACATCACTAC ATTTCA GTAGTAATGTG         TTTTTGATAAGGCAT 100 63
 JI729_17840 3517784 .. 3517803 - -10.8  -4.94672   AAATAATATTAAAAA            GGTTTCCT TAGG AGGAAACC             TTTTTTGTTGACCAT 100 436
 JI729_17835 3516484 .. 3516516 - -14.4  -3.40382   TATGAAATTCCATAA      TAAAAGGAGAACAC TCGAT GTGCTCTCCTTTTA      TCTTTATTCATACTA 100 33
 JI729_17830 3514842 .. 3514859 -  -6.3  -5.63517   TTTTTAAAGAAAAAA             GCCATAC GAAT GTATGAC              TTTTAATCTATTAAA  90 54
        putP 3513047 .. 3513072 -  -9.1  -4.70659   TTTTACATGTAAAAA         GAGTAAACGCT ATTC ACCGTTTACTC          TTTTTGCAAATCATT 100 36
 JI729_17820 NONE
 JI729_17815 3511125 .. 3511155 -   -20  -5.63517   GTCTTAAATAAAAAA       GAAGCATCTGCTAA TCG TTAGCAGATGCTTC       TTTTTTAAAATACTT 100 30
 JI729_17805 3508957 .. 3508980 - -11.1  -3.87576   TCAGAAGAAGTTAAA          GACTAGGTG GGAATA CACCTAGTC           TTTATTTTGCATAAA  95 20
 JI729_17795 NONE
 JI729_17790 NONE
 JI729_17785 3506426 .. 3506473 -   -13  -3.78837   ATATAAGGAACATAA GAAAGAAAAATAAAAAAGAGCC CATC GGCTCTTTTTTTATTTCCCTTC ATTCTTCTCTAACAC 100 14
 JI729_17770 3504890 .. 3504905 -  -3.3  -2.76171   CTCAATAATCATAAC              GGTTT CTGTTT AAACC               TTTCATAATTCCTTA  43 3
 JI729_17765 3504286 .. 3504307 -    -3  -6.11229   ATCAAAATAAAAAAA           CTCCTTAA TTCATT TAAAGGAG            TTTTCAATGTAAGAT  88 44
 JI729_17760 3503268 .. 3503297 -  -6.6  -5.39755   CAGAACGATAAAAAA       CATGTTTTGAAT ACATTG ATTCGAAACATG        TTTTTTATTTTTTAT  89 37
 JI729_17755 3501426 .. 3501442 -  -2.3  -3.57144   TCTCCTATTTGTAAA              CTTAAAA TTG TTTTTAG              ATAACATATCATAAA  47 110
 JI729_17750 3500796 .. 3500818 - -11.4  -5.51353   CAAAAATAATAAAAA           GAAACACGCA ATG TACGTGTTTC           TTCCCTTTATCATCC 100 35
 JI729_17745 NONE
 JI729_17740 3497742 .. 3497756 -  -4.3  -3.29268   ATATATTTAAATATA               CCTTT ATATG AAAGG               CTGGGATATACCATG  50 483
 JI729_17730 3497111 .. 3497127 -  -2.2  -5.63517   TTTTCAAAGAAAAAA              TCGGAA CAAAC TTCCGC              TTTACAGTAGCTCTT  80 309
 JI729_17720 3496241 .. 3496259 -  -8.9  -3.16935   AAACATGTTTATGAA             GGATAGC TAACG GCTATCC             TTCAACTATATTTAC  73 37
 JI729_17710 3494451 .. 3494471 -  -9.1  -5.71712   TCTTACATAAAAAAA            GAAAGCAAA GGA TCTGCTTTC            TTTTCCCTTTTTATA 100 36
 JI729_17705 3493145 .. 3493174 - -19.5  -4.34444   TTAATATAATACAAA       CATAAGCCCCAGT TGGT ACTGGGGCTTATG        TTATTCCGCATGCAT 100 26
 JI729_17690 3492086 .. 3492111 -  -6.2  -3.56704   TGTTCATTAAAGTAA         GAGGTTGTCA AATACA CAACAACCTC          ATTTACTTTTCTAAT  64 28
        pdaB 3491309 .. 3491336 -   -10  -4.90869   ATCAGTAACGAAAAA        TCCCAAAAGG TTCATTTT CCTTTTGGGA         TTTTTTCTAATGTTT 100 32
        acnA 3488089 .. 3488118 - -16.7  -4.36914   TCCCTTTCCATAAAA       TAAGGAAGCTAAC AATT GTTAGCTTCCTTA        TCATTCATTTCAATT 100 43
 JI729_17670 3486338 .. 3486376 - -13.4    -3.068   ATCAACTAAATGACA   CTGAATAAAGATTAGAGC ATT GCTCTTATCTTTATTCAC   ATCTCTTAAAAAATG 100 18
 JI729_17660 3485229 .. 3485267 - -11.2  -4.63527   TTACTACTTGAAAAA   GAAAAGGCAGAAATGG GAACTCT CCACCTCTACCTTTTC   ACCATTATTTTAATT 100 30
 JI729_17655 3484177 .. 3484204 -   -15  -5.76949   TACTCCTAAAAAAAA        CTCCGTGTACAA TATA TTGCACACGGAG         TTTTTTATACTATAA 100 30
 JI729_17650 3483901 .. 3483915 -  -7.2  -3.01791   ATCGCCTCCTTAACA               CTAGTA TCG TACTAG               TGTTAAGAATTATTC  64 35
        sspN 3483722 .. 3483740 -  -7.5   -5.4251   TTTATACATAAAAAA             GGAGAAT GTAAT ATTCTCC             TTTTCTTTAACCATT  90 32
         tlp 3483415 .. 3483434 - -13.6  -4.78107   TACGATTACGAAAAA            GGGCTGAC AAAA GTCAGCCC             TTTTTGTACATTTTG 100 41
 JI729_17630 3481577 .. 3481592 - -10.4  -6.20267   TGAAAAATAAAAAAA              CGTGGC TTCT GCCACG               CTTTTTTATTTTTTC 100 31
 JI729_17615 NONE
        nrdG NONE
 JI729_17605 NONE
 JI729_17600 3475859 .. 3475889 - -16.4  -3.91412   AGTATAGCCGATAAA       GAAAGCCTCTTTCA ATA TGAAAGAGACTTTC       TTTTATTTCAATTAT 100 37
 JI729_17595 3475152 .. 3475171 -  -6.5   -5.0916   TTTTCAATAGAAAAA            TCCTTGT TTTCTC ACAAGGA             TTCCTCTAGGCTACT  81 262
        parE NONE
        parC 3470609 .. 3470637 - -14.8  -5.24531   ATTGCCTAGAAAAAA        GCATCTTGCTAT TATTC ATAGCAAGATGC        CCTCTTTATTCTGGT 100 31
 JI729_17580 3469321 .. 3469337 - -10.9  -5.98675   CACAAAAATAAAAAA              GACACGA ATT TCGTGTC              TTTTTATTTTATAGA 100 29
 JI729_17570 NONE
 JI729_17565 3466839 .. 3466857 -  -6.7  -6.02919   TTACAAATAAAAAAA             GCCCACT TTCTC AGTGGAC             TTTCTACTCTATAAC  95 34
 JI729_17560 NONE
 JI729_17555 NONE
 JI729_17550 3464048 .. 3464064 -  -8.7  -5.98675   GACAAAAATAAAAAA              GCAGACA TTT CGTCTGC              TTTAATTCTCCTCAA 100 27
 JI729_17545 3462584 .. 3462598 -   -10  -5.98675   TACAAAAATAAAAAA               GTCAGC AAA GCTGAC               TTTTTACCTGGCCAT 100 29
 JI729_17540 3460506 .. 3460538 - -20.9  -5.63504   AAGCTCATAAAAAAA      GCATTTAAAAGTGGC TAA GCCACTTTTAAATGC      TTTTTCAACTCTATT 100 39
 JI729_17535 3458496 .. 3458530 - -17.4  -4.86133   TATACATACTAAAAA     GCATTTCAAAAGCAGC TCA GCCACTTTTGAAATGC     TTTCACTTTATTTTT 100 33
 JI729_17530 3456383 .. 3456401 - -14.6  -4.98522   AAGTGCATAGAAAAA             GGGGCGTA TTG TACGCCCC             CCATCTTACTTATCC 100 31
 JI729_17525 3455574 .. 3455597 -   -14  -3.93664   ATTTAACATAGTAAA          GAGTTGGCTA CCTT TAGCCAACTC           TTTTTCTTTATTTTT 100 33
 JI729_17515 3454679 .. 3454696 -  -4.8  -5.76237   CATACAAATAAAAAA             CACGCC TTCCAC AGCGTG              TTTCATTGCTTTACA  90 28
 JI729_17510 3454208 .. 3454237 -    -3  -5.33848   ACTATAAGTAAAAAA       GCCTGT-TTAAGC TCCAC ACTTAAAACAGAC       TTTTCCTACTTTTTA  71 77
 JI729_17505 3451892 .. 3451917 -  -3.9  -5.00616   GCTTGTTTGAAAAAA         GGGAAAGAGAA TCCA TACTCCATCCC          CTTCTTATCCCTACC  68 43
 JI729_17500 NONE
 JI729_17495 3448228 .. 3448268 - -13.6   -5.5762   ATTAAATAGAAAAAA CACGCTACTTGCTCTCATA CGCC TA-AAGAGCAAGTAGCGTA  TTATCATTTTTATTT 100 58
        fdhF NONE
 JI729_17470 3440659 .. 3440709 -   -13  -4.27617   TATATTTTACCAAAA TGAGCCTT-CCGCCCAAACTATTT CCTAC AAATA-TTTGGGCGGAAAGGTTCA CTTCATGAAGTTTAT 100 37
 JI729_17465 NONE
        fdhD NONE
        moaA 3438255 .. 3438299 -  -5.2  -5.63517   TCTCCAAATAAAAAA GCAGC-TTCAAAAAACCTCCT CAAA ATAAAGGTTTTTGAATGCTGC TTAATTTCTCTGCAC  86 140
 JI729_17450 NONE
 JI729_17445 NONE
 JI729_17440 NONE
        moaE NONE
        moaD NONE
 JI729_17425 NONE
 JI729_17420 NONE
 JI729_17415 NONE
 JI729_17410 NONE
        rarD 3431102 .. 3431121 -  -7.9  -5.40464   CAGTATAAAGAAAAA            TGCGTAG AAAATA CTACGCA             TTATGATACTTTTGC  95 26
 JI729_17400 3430594 .. 3430616 - -10.7   -5.3167   TAAAAACAAAGAAAA           GCAGAACAT ATAAA ATGTTCTGC           TCATAAACAATACCC 100 26
 JI729_17395 3428636 .. 3428671 -   -15  -3.10164   GGACCTACTACCCAA    CAAAATAAACCGAGAG ACAT CTCTCGGTTTATTTTC     TATATTTTTTTGCAT 100 18
        fabG 3427362 .. 3427405 - -17.9  -2.84878   TGGCTTAACTTAAAT TAATGAGAAAGAACCTGACC TATCC GGTCAGGTTCTTT-TCATTA TGTATTCCTTTAAAC 100 35
 JI729_17375 NONE
        panF 3423856 .. 3423876 -  -6.1  -5.72616   ATTCACACAAAAAAA            CGCAGTCTT ATA AGGACTACG            TTCTTCAGCTAACCT  95 39
 JI729_17365 3422767 .. 3422812 - -21.7  -5.03314   TCTATCTTTAAAAAA CAAAATAATGGAGATGGTTAT TTAA ATAACCATCTCCATTATTTTA ACTTGTATACTCCTA 100 47
 JI729_17360 3421583 .. 3421611 - -16.2  -4.96848   GCTTGTACATAAAAA        TAAACTCGGTGC TCTCT GCACCGAGTTTA        TTTAATAAAAGTCGC 100 23
        argH NONE
 JI729_17350 3419061 .. 3419099 -   -17  -3.23979   ATTAGAATTGATGAA   TAACAAAAAGGCGTGCTA TTT TAACACGCCTTTTTGTTC   TACTTCTCTAAAAAT 100 25
 JI729_17340 3410684 .. 3410723 - -18.2  -3.25491   AATCTACATGATCAA  TACAGAAAGAGCATCC TTTTTTCC GGATGCTCTTTCTGTA   TTTATTTTTTATTTA 100 27
 JI729_17330 NONE
 JI729_17325 NONE
 JI729_17320 3408536 .. 3408563 - -13.6  -5.80003   GGAATAAATAAAAAA        GCACAGATGACT ATAC AATCATCTGTGC         TTTTTTATTACTTTT 100 33
 JI729_17315 NONE
 JI729_17310 3406752 .. 3406801 -  -6.5  -5.24989   CCAGATATTAAAAAA CTGCAACCCCTGAGGAGATTTAAC ATT GCTAT-CCTCCTCGGAAGTTACAG CTCATTTAAATCTCT  82 110
        cspB 3406442 .. 3406457 -    -9  -5.91981   AAAATGCAAAAAAAA              GAAGGG CGAG CCCTTC               TTTTTTCAAAAATTA 100 38
 JI729_17300 3405347 .. 3405365 -  -3.2  -3.52472   ACACTCCCAAAGCAA             TTATAATG CAC CATCACAA             CAACAAGTTGATGCC  48 97
 JI729_17295 3404530 .. 3404549 -    -5  -4.81551   TATTTATATTAAAAA            CCGACTCT ACTA AGAATCGA             TTTTTCTGCTTTATA  72 201
 JI729_17280 3401415 .. 3401445 - -17.8  -5.55769   TTTCATAATAAAAAA       GCCACCTTTTCTAA ATT TCAGAAAAGGTGGC       TTTATAACTCTTATC 100 36
 JI729_17275 3400337 .. 3400370 -   -17  -4.02424   ATGAATGATCACAAA     TAAGCGAGAAAGTG ATTATA CACTTTCTCGCTTA      TTTTACACTGCTTCT 100 28
 JI729_17265 3398792 .. 3398825 -  -7.7  -5.58454   TTTATATCAAAAAAA     GATAGATAATAGCAAA ATT TCTGCTA-CATCTATC     CTCGTTTTCAACACT  95 39
        colA 3395453 .. 3395492 - -13.8  -4.06096   AATTAAATATAATAA  GGATCAGAGCCTATCTAT TGTT ACAGATACACTCTGATCC   TTTAGTTTAATTCAA 100 253
 JI729_17250 3392893 .. 3392925 -  -6.3  -5.27779   TTTAATAGCAAAAAA      CGAACACCCTCTC ACAATTA GATAAGGTGCTCG      TTTTCATTTTTATCG  82 115
 JI729_17240 3388391 .. 3388424 - -10.6  -5.09245   CTAAAATGATAAAAA     TAAGCACATCTTGTT ATAAA AACA-GATGTGCTTA     TTTTTTAGTTTTTAT 100 37
 JI729_17230 3387486 .. 3387520 - -11.6  -5.66684   GAATTGATAAAAAAA     GCCTAATTTCTCTACA ATA CATTGAGAAATTAGGC     TTTAAATAGTAATAA 100 65
 JI729_17220 3382116 .. 3382144 -  -6.8  -4.55908   AATAAACATAAGAAA       GACGTTCAAATCC ATAT GGATA-GAACGTC        TTTTCACTTTATTTC  78 62
 JI729_17210 NONE
 JI729_17205 3380442 .. 3380478 - -11.7  -3.08798   AGTCCTTATTTAACA    TGCAAAAGGACTGCTAA TTA CTTGCAGCCCTTTTACA    AGTTAATATACACTT  93 127
 JI729_17195 NONE
 JI729_17190 3377097 .. 3377111 -  -2.9  -2.57067   TCAATATTGAATTGA               GAAAA AGACA TTTTC               AAACTCCTCCTTACC  40 128
 JI729_17185 3376073 .. 3376099 - -12.6  -4.11484   CTCAAGTTGTCAAAA         TCACTAATAAAT CAT ATTTATTAGTGA         TTTTGACAACTTGAT 100 434
 JI729_17180 NONE
 JI729_17175 NONE
 JI729_17170 3372834 .. 3372848 -  -2.2   -3.7175   AAAAATTTATCTAAA               TAATTA AAA TAATCA               GATTTTTTACTGTAA  49 153
 JI729_17165 3356761 .. 3356772 -    -3  -4.11216   CTTTTACCTCCAAAA                GAAA TGAA TTTC                 ATTTTAAACCGTTAT  55 37
 JI729_17160 3348543 .. 3348555 -  -6.3  -2.60813   TATCCCCCTAAATAG                TTTCC GTC GGAAA                AGGCACAAAAATTAT  57 95
 JI729_17155 3329387 .. 3329422 - -17.2   -4.2693   AAGTCATCAAAATAA    GAAAATTGGCATTTCT TTAA AGAAATGCCAATTCTC     AAAAATTAAACTGTT 100 31
 JI729_17150 NONE
 JI729_17145 3327390 .. 3327414 - -10.1  -4.73388   AAGTTTTATTAAAAA          GAGCAGTTATT ACA ACTAACTGCTC          TTTTTTATTTTGGTT 100 188
 JI729_17135 3325535 .. 3325566 - -10.4  -4.37886   CTATTGTTCATAAAA      TAAACCACAAAATC TTTC GATTTCATGGTTTA       TCAAATATAAAGATA 100 175
 JI729_17125 3324206 .. 3324240 -  -9.5  -3.97241   ATAAAAAGTATTAAA    TAAGGGAAGACACC TTAGAGTT GGTG-CTTCCCTTA     TTTGTTGATTATTCA  86 34
 JI729_17120 3321306 .. 3321337 - -17.6  -2.68071   TTTAATGTAAATGTA      TTTAAAAACCCTCC AAAT GGAGGGTTTTTAAA       ATGGCTTATCTGCCT 100 146
 JI729_17105 3318197 .. 3318212 -  -7.6  -3.91084   GGATTCCTAAGTAAA              GAGTTC TATC GAACTC               TAATTGATTAGGCTA  76 33
 JI729_17075 NONE
 JI729_17070 3307660 .. 3307679 -  -9.4   -5.7946   TTCCCAATAAAAAAA            TTCTCTTG CATC CAAGAGAA             TTTTAAATTGGGTTC 100 263
 JI729_17060 3305961 .. 3305975 -  -7.2  -3.76224   TGTTGATGCAGTAAA               GCTTTT AGA AAAAGC               AGGATTGCAATTTGA  71 174
 JI729_17045 3304347 .. 3304372 - -10.5  -5.47431   TGAACATACAAAAAA         GAACCTGCAGC ACAC GCTACAAGTTC          TTTTTCACTATATTT 100 33
 JI729_17040 NONE
 JI729_17035 NONE
 JI729_17030 NONE
 JI729_17025 3300956 .. 3300976 - -11.2  -2.80981   ATTTCAAAACAATAG            GCAGCATG TATTC CATGCTGC            TTTAGTTTATTTTTT  85 27
 JI729_17020 3300173 .. 3300192 -  -7.9  -3.52177   CTTTAAAAAACGGAA            GACCTTC AATTAA GAAGGTC             TTTTTAAATACGCTT  71 70
 JI729_16990 3293293 .. 3293342 -  -9.8   -5.8187   CATTCAATAAAAAAA GCCATAAAT-TATTTAGAATACAC TCCT GTGT-CCCTAAATAAATTTATGGC TTTTCTCAAATATCT 100 146
 JI729_16985 3292088 .. 3292114 -  -8.1  -4.81551   GAGTTAGATTAAAAA         GGGTATACC TAAAACACT GGTATACCC         TTTTTCACTTATTTT  87 34
 JI729_16970 3289349 .. 3289372 -  -6.1  -6.08342   CAACAAATAAAAAAA          GAAATGTCG CTCATT CAACATTTC           TTTAGACTTTCTTCA  95 68
 JI729_16960 3287649 .. 3287678 - -12.4  -6.14618   TACAAAATAAAAAAA       TCGGTATTGATA ATTACA TATCAATACCGA        TTTTTTATAATTATT 100 36
 JI729_16955 3286074 .. 3286108 - -10.2  -2.78237   TAAATAATAAGGAAC     GACAAAATAGGTAATA AGA TTCCACCTATTTTGTC     TATATAGCAGAACAA  78 56
 JI729_16950 3285707 .. 3285722 -  -3.4  -3.55824   TAGCATGGAGAAATA              TTATAT ATTT ATATAA               AAAATATAAGGCTGA  50 18
 JI729_16945 3284558 .. 3284570 -  -2.7  -3.35197   TGGTATACATATCAA                TACTC CTT GAATA                TATTTTCTTTTCATT  45 50
 JI729_16940 3283692 .. 3283730 - -17.8  -2.98823   TTGCTTTCATACATA   GAATAAGGATTGACATAA TGT TAATGTCAATCCTTATTC   TCATTCTATTTTCGT 100 26
 JI729_16935 3282454 .. 3282479 - -16.3  -4.98436   TCAACATTATAAAAA         GCATGCAGAGT ATAT ACTCTGCATGC          TTTTTATTTGAATTA 100 43
        amyS 3277966 .. 3277993 -  -7.8  -5.21506   ATAACAATATAAAAA        GAAGAGGAAAAC TTAT ATTTCCCTCTCC         TATTTCATCACCAAA  90 41
 JI729_16915 3276490 .. 3276508 - -11.7  -5.46276   AACATATACAAAAAA             GCTGCGG GGATA CCGCAGC             TTTTACATTTACAAG 100 341
 JI729_16910 NONE
 JI729_16905 3273875 .. 3273908 - -14.9   -5.7946   CGCTTAATAAAAAAA     GCTATCTTTCTGTAT ATCC ATACAAAAAGATAGC      ATCTTTTATGATTAC 100 59
 JI729_16900 3273036 .. 3273059 -  -8.2   -5.4505   CGTTCCAATAAAAAA          GGAAGCTAGA TTTC TCTACCTTCC           TTTTCTTATTTTTAT  95 37
 JI729_16890 3270953 .. 3270985 - -12.9  -4.90471   ATTTAAAACATAAAA      GAACCGATACTTG TTACATG CAAGCATCGGTTC      TTTATACAAAATTGC 100 77
 JI729_16885 NONE
 JI729_16880 3269661 .. 3269695 - -10.2  -2.86117   AGACTGAATGCAAAT     CGAGCATGTTTTGA AATCCAA TCAAAACATGCTCT     TAAAATATTCTATCT  78 60
 JI729_16870 3268388 .. 3268435 - -14.6  -3.63569   CTAATCCTTCAAGAA GTTATACAAAAAAGGTAGATAA TAAT TTATCTACCTTTTTTGTATATA TTATTTAACATTACA 100 70
 JI729_16865 3267291 .. 3267303 -  -4.1  -3.24747   GTTGCACATTATGAA                CTACT ACT AGCAG                AAGAGGTTGCTGCAG  50 6
 JI729_16855 NONE
 JI729_16850 NONE
 JI729_16845 3263096 .. 3263117 -  -5.1  -5.64873   TCTAACAATAAAAAA           GACCCTCAA AATT TAGAGGATC            TTCCTAACATCGAAT  86 46
 JI729_16840 NONE
 JI729_16835 3262005 .. 3262040 - -16.4  -3.37487   TTATATCGTCAAATA    CAAAAGGTTTGCAGCA TCCG TGCTGCAAACCTTTTT     TCATCACCAAAATAT 100 29
 JI729_16825 NONE
       bshB2 3259295 .. 3259316 - -12.3   -5.7946   TCTTCAATAAAAAAA           GCGCCATCA CAAG TGACGGCGC            TTTTCTATGTAAGAG 100 64
 JI729_16810 3257347 .. 3257376 -  -8.7  -3.70039   AAATTTTAAAAGGAA       CCCCTTGTTTATT TAAC AACAAACAAGGTG        CAATCCAACATTCGG  77 128
 JI729_16805 3256888 .. 3256910 - -12.8   -4.0641   TCTCATTTACATAAA           GAAAGAGGGA GTT CCCCTCTTTC           TTTTATATCGTCCTA 100 51
 JI729_16795 3254697 .. 3254730 - -17.1  -3.81948   CAACGGGATAAAATA     TAAAAGAGTCTCATT AAAA AATGAGACTCTTTTA      CGATTTCATATTTAA 100 37
 JI729_16790 3252736 .. 3252772 - -15.4  -4.18443   GACAAATAACAACAA    TAAGAAAAGGCTGTTC CAAAT GAACAGCCTTTTCTTT    ATTTACTTGAAATCT 100 24
 JI729_16780 3251558 .. 3251581 -  -7.5  -5.00138   TATTTAAATGAAAAA          GTCATGAGC ACGCGA ACTCATGAC           TTTTTGCACTATATA  85 34
        yeiL NONE
 JI729_16755 3248458 .. 3248485 -  -5.6  -5.80951   ACTCAAAATAAAAAA        GAGCAGTTTACC ATAA AGTAAACTCCCC         TTCATTCTATCTTCC  93 27
 JI729_16750 3247114 .. 3247151 -    -3  -3.49114   TAGACTATATCATAA   TTTACTAAAATAGAAA TATCTT TTTCTGTTTCAATAAA    AATCCCTATTTTTTC  48 180
 JI729_16745 3246747 .. 3246775 -  -6.1  -4.48987   TCCTTATAATGAAAA        TAAAGAAGCAG TTCCTTC CAGCTTCTTTA        TCTATATAACATTTT  74 27
 JI729_16735 3246082 .. 3246101 -  -6.4  -5.08824   GGTGCATTGAAAAAA            GATCAACC AAAT GGATGATC             TTTTTTATAATTTAT  81 30
 JI729_16725 NONE
 JI729_16720 3244580 .. 3244599 -  -7.2  -5.87996   TAATTAACAAAAAAA            GCGTACAA AATT TTGTACAC             TTTAAAACTTAATCT  95 34
        bla2 3243651 .. 3243676 - -14.9  -4.34488   TATAGTTAGAAGAAA         GAGAGGAGAAA ATTA TTTCTCCTCTC          TTTTGTATTTCTACA 100 46
         hcp 3241608 .. 3241646 -  -9.1  -5.28831   ACTAAGAAAAGAAAA   TACCCCAAAACAAAAAT TCTAC ATTTTTATTTTGGGGCG   CTATACTATACCAAA 100 91
 JI729_16705 NONE
 JI729_16700 3240426 .. 3240448 -  -3.4  -3.04527   AGCTAAAAATATAAC           TGAATAGCTA TGA TGGCAATTCA           TTTGTGTAACCAGCT  44 66
 JI729_16695 NONE
 JI729_16690 3238741 .. 3238760 -   -10  -5.05116   TGATAAATAATAAAA            GCACGGAA AATC TCCCGTGC             TTTTCTAAATATATA 100 72
 JI729_16680 3237036 .. 3237060 - -13.7  -4.62783   TATTCATGTTAAAAA          GGCCAACAATC CAA GATTGTTAGCC          TCTACTTTCCATATT 100 57
 JI729_16675 NONE
 JI729_16670 3235594 .. 3235610 -  -2.3  -3.09365   TATCACAGAAATAAC              TACTTCT TTC AGAACTA              TAACATCAAACGTTT  42 319
 JI729_16660 3233585 .. 3233627 -  -9.6  -5.77571   ATTAAAAAACAAAAA CGTTATTCTTTCTAAATAA GCAAAA TTA-CTAGAAAGAATAACG TTTTTTATTAGTTAC 100 277
 JI729_16650 3232584 .. 3232617 -  -8.4  -5.61881   TTTCAAAAATAAAAA     CCATCAATTTGA AAAAGGGTAA TCAAATTGATGG      TTTTCTTATAGTATC  95 112
        sigI NONE
 JI729_16640 3229967 .. 3229990 -  -8.1  -2.75481   GTGCAACTTTAATCA          GTGGGGGTT TTGTTC ATCCCCCAC           TAATCATCAGCCCTC  68 113
 JI729_16635 3226539 .. 3226555 -  -8.7  -5.66868   AACCAATGAAAAAAA              GAGCAGA TAG TCTGCCC              TTTTATGATGCCTCC 100 28
 JI729_16630 3225967 .. 3226003 -  -4.6  -5.93252   CTTAAAAATAAAAAA   CGCTATTC-TCTCTGTA AAAT CATAGAAAAGAATAGCG    CTTTTTATTTTGAAA  91 54
 JI729_16625 3225671 .. 3225728 - -10.4  -3.05816   TCATTTTTTAGCTAA CTTGT-T-TTCTTAGATTGATGGACGTG ACCC CACATCCATCAATCTAAAAAGATACAAT TAGAAAAATGAGATT  81 79
 JI729_16615 3224571 .. 3224599 - -14.9  -4.83518   AAGAAGAATATAAAA        TATCCATTTACTT TAC AAGTAAATGGATA        TTTCCCATTATATAT 100 33
 JI729_16610 3222921 .. 3222947 - -10.3  -5.73978   ACCATAAACAAAAAA         TCCAGTTATGC TTTGT ACATAACTGGA         TTCCTCATTATCTAA 100 48
 JI729_16605 3222203 .. 3222241 - -14.8  -4.54047   TTATCTTACACAAAA   TACAAAAGGAAACCCTGT TCT AAAGGGTTTCCTTTTGTC   ATCACACTACCAAAC 100 41
 JI729_16595 3221079 .. 3221105 -    -8  -2.81207   TATTGAACAGATAAT         GAAAGTCCGG ATGTATG CCGGGCTTTC         TTTTTTATATTGAAA  66 30
 JI729_16585 3219918 .. 3219928 -  -3.2  -2.93335   TTTGACAAACATAAG                 GGAA TTC CTCC                 TAAAAATCTTAATAT  44 131
 JI729_16580 3218931 .. 3218947 -  -3.7  -2.65091   ACTGTAACCGATAAT              GGAATTA CAG TAAATCC              TTTTTCGCTTCTGCA  44 76
 JI729_16575 NONE
 JI729_16570 3217381 .. 3217401 - -10.5  -5.54403   AAAAAACAAGAAAAA            GCAAAACAC TAA GTGCTTTGC            TCCTTATAAAATTCC 100 29
 JI729_16565 3215628 .. 3215652 -  -9.4  -5.82036   ACAAGAAATAAAAAA          TACTACCTCC AAATG GAAGGTAGTA          TTTTTTTATTAATCA 100 34
 JI729_16555 NONE
 JI729_16550 3212988 .. 3213016 -  -8.9   -2.8176   TAACGTATAATAGGA        GCAGTTGAGACAA TAC TTGCCTCAACCGA        TTTTTATATCTCTTT  71 29
        spxA 3212328 .. 3212338 -  -2.6  -3.60048   CTCCTTTCAAAAAAC                 TTTT TCT AAAA                 ATACTACTTATTAAT  48 36
 JI729_16540 NONE
 JI729_16535 3211560 .. 3211572 -  -4.9    -3.885   ACGGCTATATAATAA                TTAAG CCG CTTAA                CGCTCTTGATTGATA  61 22
 JI729_16530 3210895 .. 3210913 -  -8.1  -5.54079   GCAAAAAGCAAAAAA             GCTGCCC CATAT GGACAGC             TCATTTACATAATTA  95 222
 JI729_16520 3208606 .. 3208636 -  -9.8  -5.25656   AAAATGACTAAAAAA       GGACAAACTCTCCA ATG TGAGAAGTTTGTCC       AAAAAGTTATTCGTA 100 76
 JI729_16515 3207454 .. 3207490 -  -6.8  -5.08178   ATAGACATACAAAAA   CGCCATCCTTTCCTATA ATTC TA-AAGAAAGAATAGCG    TATTCTTTTCAAAAA  83 69
 JI729_16510 3206446 .. 3206497 - -10.5  -5.58179   GACTATAAGAAAAAA TAATAAAAAGCCAAAAACGAACA ATAATA TGTTCATTCTTGGCTTTTACTTA ACCATCACATTTACT 100 45
 JI729_16505 3205228 .. 3205246 -  -9.6  -3.81574   TAAGAAATAAAGCAA             GGTGATCA AAA CGATCACC             TTTTTCCCTTACAGA  86 212
 JI729_16495 3203735 .. 3203752 -  -4.1  -3.59202   TAGCTTCATATACAA             TTCATGC TCAA GCATGTA              AGTGTCCCCCTTCAA  53 15
        ribD NONE
 JI729_16485 3201930 .. 3201963 -  -9.2  -5.20216   GATAGTATTAAAAAA     TA-AGGAAAGACATA ATACG TATGTCTTTCCTCTA     AAATTGTAATACTCA 100 79
 JI729_16480 3199698 .. 3199721 - -10.4   -5.8187   TATTCAATAAAAAAA          CACGAAGACT CTTA AGTCTTCATG           TTTTTTATACATGTT 100 138
 JI729_16475 3197243 .. 3197255 -  -2.7  -3.23975   ATTTCTCAAAAATTA                CTCAT TAT ATAAG                CTATCTTTATATTTA  45 10
 JI729_16470 3195285 .. 3195307 - -11.4  -5.52909   TAACATTCAAAAAAA           CCTTGCAGAA AAA TTCTACAAGG           TTTTTGTCCATAAAT 100 94
 JI729_16455 NONE
         tkt 3189288 .. 3189340 -  -3.6  -2.67188   CCATATCACTACAAT CTG-GAATACCTTTCAGCACTGA AATTTTAA TATGTACAGAAAGGTATTCACAG TCATAGCTTAAGAAT  44 33
         gnd NONE
         fsa 3187312 .. 3187358 -  -6.8  -4.58943   TTGATATAAAAAGAA TCTCCCTTATCAGAGATACAA TTTAAC TCACCTCTCTGATAAGGG-GA TTTCTCTTCCATAAT  78 231
        gntP NONE
        gntK NONE
 JI729_16425 3182927 .. 3182964 - -21.7  -4.86385   AGGCCGAAAAAGAAA   CAATAAAAAGCAAAGCG ATAT CGCTTTGCTTTTTATTG    TTTTCTGAGTATATG 100 60
 JI729_16415 NONE
 JI729_16410 3181169 .. 3181197 - -10.3  -5.59962   GAAAAGAAATAAAAA        GCAGGCAGAGATT TTT AGTCTCTGCCTGT        TCGTATTATTGGATC 100 11
 JI729_16400 3179727 .. 3179740 -  -2.5   -3.7791   TAATTATTGATCAAA               TATTA TTAT TAATA                TTTTTGTAAGTTTTC  50 20
 JI729_16395 3178884 .. 3178895 -    -3  -4.99035   TCATTTATACAAAAA                CATA ACGA TATG                 CATCATTAAAACGTA  66 3
 JI729_16365 3173252 .. 3173275 -  -8.2  -2.60901   ATATTTCCAATGAAT          CCCCTTAGTT AAAA AACTAAGGTG           TCCACCTCCTGTATA  68 116
 JI729_16360 3171910 .. 3171932 - -12.1  -4.77567   ACTTTTAGAAGAAAA           GCAGCAACT TACAC AGTTGCTGC           TTTCTCTTCTTCTTG 100 11
 JI729_16355 3171428 .. 3171445 -  -5.5  -5.83211   TACTAAAATAAAAAA             GGAACCC GATT AGGTCCC              TTTCATCATAGCTCT  93 31
 JI729_16350 3170621 .. 3170652 -  -8.9  -5.60993   TTTTTCATAAAAAAA      GAGAGAAATCTAC ATCAAA ATAGATTCCTCTC       TTTTACATTTGGACT 100 77
 JI729_16335 3168656 .. 3168681 - -12.7  -5.55769   GTCTATAATAAAAAA         TTCGACCGTCA TATG TGACAGTCGAA          TTTTTTATTCTTCAT 100 30
 JI729_16325 3166330 .. 3166343 -  -4.5   -3.1207   GTAAATTTGAATATA               CTGGG TGCT CCCAA                CTAAAAATAAAACTT  52 436
 JI729_16315 3163381 .. 3163391 -  -2.6  -2.74501   ACTAACGTGTCAAAC                 TATT TTT AATA                 CATTTAAACTAGCTG  41 9
 JI729_16310 3160792 .. 3160824 -  -7.7  -5.27779   TTTAATATTAAAAAA      CACAAGGTGTGTCTT ACA AAGGCATTCCTTGTG      TTTTTTATATTCTTT  90 39
 JI729_16295 3159382 .. 3159408 - -11.7  -2.71144   CACCTCTTCGAATGA         TGAAAAGCCCT TATTC AGGGCTCTTCA         TCATAATCTATATAT  89 41
 JI729_16290 3158204 .. 3158233 - -13.8  -5.45652   ATTGTTAATAAAAAA       GAGCTAAAACAG ATAATA CTGTTTTAGCTC        TTTTTTCACGTATTC 100 31
 JI729_16280 3155656 .. 3155674 -   -11   -4.8236   TATCTAAAAAAATAA             GGGAACGC TTA ACGTTCCC             TCTCAAATCCAATCC 100 15
 JI729_16265 NONE
 JI729_16260 3152287 .. 3152309 -  -9.9  -4.49937   GCAACAATAGTAAAA           GGAGGCTAA TCCGC TCAGCCTCC           TTCTCATTATTAATC 100 35
 JI729_16255 NONE
 JI729_16250 3150363 .. 3150384 -  -5.9  -3.14026   TATACGCATATTTAA           TTCACGCAT TATA ACACGTGAA            TGATCTTGTATAGTA  57 169
 JI729_16245 3149273 .. 3149304 - -14.7  -5.75478   AATCACATAAAAAAA      TACCGTCATTCTT TCCAAG AAGAATGACGGTA       TTTCTCATTGATTAT 100 37
 JI729_16230 3148259 .. 3148275 -  -2.3  -4.04927   TTAATTACCAAATAA              CTATATT GAT ATTATAG              CATACTTCTATTTTA  52 65
 JI729_16225 NONE
 JI729_16220 3145817 .. 3145842 - -14.1   -3.0094   CTCCATCTATACACA         GATCCCCTGCA TGAA TGCAGAGGATC          TATCTTCTTATTGAA 100 33
 JI729_16215 3144888 .. 3144936 - -14.3  -5.54338   CAAGTAAAAGAAAAA GAGTATATTGTCACATTAAGA ATTACTA TCTTCATATGACAATATACTC TTCTATCAAATTTTT 100 123
 JI729_16210 3143951 .. 3143970 - -12.2  -5.57054   AACAACCTAAAAAAA            GCCTACTC ACAC GAGTAGGC             TTTTGAAACTATGAA 100 34
 JI729_16195 3141029 .. 3141086 - -24.8  -3.49169   GCAAGAGCAAGAATA GT-ATGAATGAAAAACACGAGGGCGGAT GCAT ATCCGCCCTCGTGTTTTT-ATTCATCAC TCATTCAGTGATTTA 100 22
 JI729_16180 3139323 .. 3139372 - -17.7  -5.85011   TAAAAAGTAAAAAAA TTTAAAAATAAAAGGTGTTTTCA CGTA TGAAAACACCTTTTATTTCTACA ATTATTTCTTCTATA 100 54
        ybaK 3135718 .. 3135749 -  -5.9  -5.63517   TTTGTAAATAAAAAA      GGACAATCAGCCC CATAAT GGACTAACTATCC       TCTAAATTATTATCT  88 200
 JI729_16150 3134025 .. 3134054 -  -6.6  -4.91459   TAATACGCACAAAAA       TAGATTGGATACC ATGTA GGCA-CCAATCTA       TTTTAATTAAAGAAA  82 32
 JI729_16145 3132670 .. 3132709 - -11.8   -4.7373   TTATTCTAGTAAAAA  TATAAGAAGGGATTGATCA TAA TGATCAATCCCTT-TTATC  AAAATATAATACCTT 100 49
        rraA 3130166 .. 3130180 -  -5.6  -5.72616   ATTTACACAAAAAAA               GGCCCT TCA AGGGCG               TGCGATTGACACTCT  93 311
 JI729_16130 3128248 .. 3128271 - -12.6  -4.34402   CCTTTCATACGAAAA          TTAGGAGCAA ATAA TTGCTCCTAA           TTTTTTGTTAAGCTG 100 33
 JI729_16125 NONE
 JI729_16120 NONE
 JI729_16115 NONE
 JI729_16110 3124095 .. 3124119 - -12.3  -5.60993   TTTTTGACAAAAAAA          TGCTCCTTACA ATA TGTAAGAAGCA          TGAAAGAGGCAAACG 100 82
 JI729_16105 3123244 .. 3123265 - -13.1  -5.02231   GAAAAAGATTAAAAA           CTTCCCATC AATT GATGGGAAG            TTTTTTCAAATGGCA 100 31
 JI729_16095 3122464 .. 3122478 -  -7.8  -5.80364   ATTTTAAGAAAAAAA               GAGAGC TTA GCTCCC               TTTTCTCGCCTTATA 100 17
 JI729_16090 NONE
 JI729_16085 NONE
 JI729_16080 3120836 .. 3120852 -  -6.6  -5.30616   TTATTTAAACAAAAA              GCTAGT TTTAT ACTAGC              TTTTTTACATAATAA  84 42
 JI729_16070 3118478 .. 3118497 - -12.2  -4.43844   CCATCATTTAGAAAA            GCTTCCAC AGTA GTGGAAGC             TTTTCTAAATGATGG 100 180
 JI729_16050 NONE
 JI729_16045 3114079 .. 3114107 - -11.2  -4.93968   ATTCACAATGAAAAA        CAAGCTAAAAGA ATGAA CCTTTTAGCTTG        TTATCTTATCCTTCC 100 31
 JI729_16040 NONE
 JI729_16035 3112561 .. 3112587 - -10.2  -5.84381   TGATTAATAAAAAAA         CAAGCCATCCAA CTA TTGGATGGCTCT         ATACTATAAAGAAAA 100 53
 JI729_16030 3110744 .. 3110754 -  -2.6  -3.11289   CCAATGCTAAAATTA                 TAAA TTT TTTA                 ATTGTATCTCATTCC  43 52
 JI729_16025 3109811 .. 3109834 - -12.6  -5.21506   AGAACAATAGAAAAA          GGATCTGATA TGAA TATCAGATCC           TTAACTTTAATTTCA 100 192
 JI729_16020 NONE
 JI729_16015 NONE
 JI729_16010 NONE
 JI729_16005 NONE
 JI729_16000 NONE
 JI729_15995 3105093 .. 3105105 -  -2.7  -2.91429   CAAAAGGTTTATAGA                CTTTG TCT CAAAA                TTTTAAAAACCTTTT  42 39
 JI729_15990 3104719 .. 3104750 -    -6   -5.2696   CTAAAACGCAAAAAA      GCACTTG-TTGCC TTTAATT GACAATCAAGTGC      TCTAAGTTCATCTGT  81 162
 JI729_15985 NONE
 JI729_15980 3103150 .. 3103182 - -11.5  -4.76874   AAGACAAAATTAAAA      GGAATGAATCCTACA CAA TACAAGATTCATTCC      TCACTAGATGCTTAT 100 251
 JI729_15975 NONE
 JI729_15970 3101925 .. 3101951 - -12.4  -3.32698   TCATTGCACATAACA         CTCTATGATGGT ACA ACCATCATGGAG         TATCTATTTTCAAAC 100 102
 JI729_15965 NONE
 JI729_15960 NONE
 JI729_15955 3099176 .. 3099207 -  -2.2  -5.45652   ATCTCTAAGAAAAAA      GCACTCG-CTACCAA TCA TAGGTTTTCGAGTGC      TTAAATGTATATACT  71 52
 JI729_15945 3097799 .. 3097825 - -12.4  -3.32698   TCATTGCACATAACA         CTCTATGATGGT ACA ACCATCATGGAG         TATCTATTTTCAAAC 100 71
 JI729_15930 NONE
 JI729_15925 NONE
 JI729_15920 3095039 .. 3095071 - -19.4   -5.4833   CTATCTAATAAAAAA      GCGCTTGATTGTCT TTCGT AGACAATCAAGCGC      TTTAAGTTCATTTGT 100 395
 JI729_15910 NONE
 JI729_15905 3093497 .. 3093537 - -10.1  -2.56011   TAAGTTTAAATACAT TTAAAGCACTTG-TTGTC CAAAAT AACAATCAAGTGCTTTAA  TTTCATATGATTTAT  75 136
 JI729_15900 3092566 .. 3092594 -  -7.6  -3.02632   CAAGCGGACAAACTA        TAATATCAATGG TAATG CCAATGATATTA        ATATTATTGAGGATT  67 383
 JI729_15890 NONE
 JI729_15885 3091224 .. 3091234 -  -2.6    -3.762   AAACTAAGCCAAGAA                 TATT AAT AATA                 GATATTGTTATTTTT  50 115
 JI729_15880 3090350 .. 3090384 -  -2.2  -5.73978   ACGATAAATAAAAAA     CATCCATCTTGAAAAA AGA TTGATCAAAATGGATT     CTTCTTCAGCAGATT  80 133
 JI729_15875 3089600 .. 3089616 -  -4.5  -3.08812   CGTTTCGCAATAAAT              TTCATGA AAT TCATAAA              GTATGTCGGTATGTA  52 46
 JI729_15870 NONE
 JI729_15865 NONE
 JI729_15860 NONE
 JI729_15855 NONE
 JI729_15850 NONE
 JI729_15845 NONE
 JI729_15840 3085266 .. 3085284 - -10.3  -3.75093   TATATAACACAAACA             CCCTAGC TCTTC GCTAGGG             TTTTCTTAGTTTTAT  89 66
 JI729_15830 NONE
 JI729_15825 3083532 .. 3083552 -    -4  -3.62012   AAGAAAAAAATCCAA            GAGTAGTC TTTAC GATTACTC            TTTTGTTTTCCTATA  53 262
 JI729_15800 NONE
 JI729_15795 NONE
 JI729_15790 3078831 .. 3078854 -  -2.5  -6.02919   GCACAAATAAAAAAA          CTACAGT CTAGTATATC ACTGTAG           ATTCTTACATTTACT  86 108
 JI729_15770 3076087 .. 3076122 -   -18  -3.60098   ATTGGTCATGGTAAA    GCCTATATAGAATTAT AGCT ATAATTCTATATAGGC     TTTTTTTCACCTGGA 100 16
 JI729_15765 NONE
 JI729_15760 3075223 .. 3075235 -  -3.4  -3.28912   TTACATTTATACGAA                CCAT TTTAT ATGG                ATAATATTATTAATT  47 35
 JI729_15755 3074345 .. 3074373 -  -3.9  -5.18726   CCGTTATAATAAAAA        TCACTCCTTAACA GAG TGTCATAGAATGA        TTCATCACATATATC  73 47
 JI729_15750 3073413 .. 3073431 -  -3.2  -3.78096   GAAAGAAAACGATAA             TAAGGAAA GCC TTTGCTTA             CTTGTGTTGTACAAC  52 277
 JI729_15740 NONE
 JI729_15735 3072108 .. 3072125 -  -4.2  -3.56704   TGTTTATGAAATGAA             TTTGCA TCTCCC TGCAAA              CTACCTATATGGCAT  53 26
 JI729_15730 3071639 .. 3071657 -  -4.7  -3.16217   CATCAACACTTAACA             TTTGAAA TATTC TTTCAAA             AACATATAAAACGTT  52 1
 JI729_15725 3070925 .. 3070936 -  -2.2  -5.88565   GTGATAATAAAAAAA                GCAG TTTG CTAC                 ATGCTTCAGAGAGTA  83 188
 JI729_15715 3069651 .. 3069662 -  -2.2  -5.08011   AAAATGTTTAAAAAA                CCGA ATAT TCAG                 ACGTTAATAATTATA  65 42
 JI729_15710 NONE
 JI729_15705 3068201 .. 3068225 -  -8.6  -3.35813   TCGCACTTTAATGAA          GGACTAGGCC ATTTA AACCTAGTCC          TACATAACTTTAACT  74 35
 JI729_15700 3067299 .. 3067325 -  -7.4  -4.36554   CATTATTATAATAAA         TACATACACACT CCC ACCGTGTATGTA         TCTCAACCTCCCTTT  79 321
 JI729_15695 3065321 .. 3065354 - -10.5  -3.44848   TCTTCCTACTAAATA     GGAGCTATTCCAAATT ATT ATTTTGG-ATAGCTCC     TTTCAAATTCTTCTT  83 179
 JI729_15690 3064214 .. 3064231 -  -2.7   -4.9218   TATCTATTATAAAAA             TACCCTT ATTT AATGGTA              GTATAGCATAAATCT  64 81
 JI729_15685 3060727 .. 3060756 - -12.3  -4.77986   TGAAACATTGAAAAA       CCCCCTTCATT TTCCTACC AATGAAGGGGG        TTTTCTTATCGTTCG 100 31
 JI729_15680 NONE
 JI729_15675 3059032 .. 3059049 -  -9.1  -5.95286   AGGAAAAATAAAAAA             GGAGCAG ATTT CCGCTCC              TTTTTATCCTTTTAC 100 49
 JI729_15670 3057769 .. 3057788 -  -3.6  -3.23393   CCCTAGGTGATAAGA            TGGTGAAA GGCC TTTCACTA             GAAATATATGTAGTA  49 70
 JI729_15665 3057503 .. 3057530 - -12.2  -5.51046   TAAACATACAAAAAA        GTGTTAAGTACA TAAT CGTACTTAACAC         TCTAGTAATAAAGTA 100 47
        serC NONE
 JI729_15655 NONE
 JI729_15650 3053760 .. 3053792 - -10.1  -4.22214   ACTGAGCCAAAATAA      GAAAAACCGAAAC TCAAATC ATTTCGGTTTTTC      AAAACTATAGAAGTC  91 46
 JI729_15645 3052719 .. 3052747 -  -7.5  -2.82742   AGGGTCCTATAATTA        TCAGTTTACAGGT CAA ACTAGTAAACTGA        TTTTAGAGTTTGAAT  63 436
 JI729_15635 3051141 .. 3051177 - -18.3  -5.64421   ATTTCAAATAAAAAA    GTACCCATCTCATTG TCATACG CAATGAGATGGGTAC    TGCATGATACATTTA 100 96
 JI729_15630 3050005 .. 3050041 - -11.9  -5.74684   CAAGAAAAAGAAAAA    GAATCTATTTTGAAAAA AGA CTATTCAAAATAGATTC    TCACGTTTTATTATT 100 67
 JI729_15625 NONE
 JI729_15620 3047842 .. 3047863 -  -8.7   -5.4588   TAAAACGACAAAAAA           GAGGCAGTT CCGA AACAGCCTC            TTTCTTTCCATCTAT 100 37
 JI729_15605 NONE
 JI729_15600 3043778 .. 3043807 - -15.9  -5.63504   AAGTCCATAAAAAAA       GGAAAACCGCACA TACA TGTACGGTTTTCC        TTTTTTTATATTAAC 100 31
 JI729_15570 3039063 .. 3039084 -  -4.5  -3.19602   TGTCGCACACTAACA           GCAAGTGCAA GTG TTAC-CTTGC           TAAAAACTCGCTTTT  52 17
 JI729_15565 NONE
 JI729_15560 NONE
 JI729_15555 NONE
 JI729_15550 NONE
 JI729_15545 NONE
 JI729_15540 NONE
 JI729_15535 NONE
 JI729_15530 NONE
 JI729_15525 NONE
 JI729_15520 NONE
 JI729_15515 NONE
 JI729_15510 3033063 .. 3033080 -  -5.5  -2.74792   GTATCATTTCTAAAC             GCGGC TGATCAGT GCCGC              CGATACTTCTAAAAC  55 235
 JI729_15505 NONE
 JI729_15500 NONE
 JI729_15495 3032402 .. 3032414 -  -4.9  -3.97636   ACCTGAACTGACAAA                TAAAG CTT CTTTA                AAGTCTTCTTTAATC  61 35
 JI729_15490 NONE
 JI729_15485 NONE
 JI729_15480 NONE
 JI729_15475 NONE
 JI729_15470 3030107 .. 3030142 -  -3.4  -3.78904   CATTAAACTCAAGAA   TGC-AATCGTGACCCG CTTGTT CGGGTT-CGATTCGCA    TCATGCCTACACCTC  52 59
 JI729_15460 3029158 .. 3029168 -  -5.4  -3.23452   ATCCTGATAACTCAA                 TGGA ATT TCCA                 CCCTTCCTTTTTATC  56 11
 JI729_15455 NONE
 JI729_15450 3028398 .. 3028412 -  -5.8  -5.00616   CCTCGTTCTAAAAAA               CTTAAA ACA TTTAAG               ATCAAAAGAACGAGG  77 425
 JI729_15445 3028051 .. 3028064 -  -6.7  -6.09196   TTGAAAATAAAAAAA               GAGTC TTCA GACTC                CCCCTTTGCTTTCGC  95 18
 JI729_15440 3026708 .. 3026735 -  -5.7  -4.99043   TTCTGATAAAGAAAA        GAAACAGAAAT GGCGAA ATCTCTGCTTC         TCAACTTGTAACTAT  77 51
 JI729_15435 NONE
 JI729_15430 NONE
 JI729_15425 NONE
 JI729_15420 NONE
 JI729_15415 3021803 .. 3021815 -  -3.5  -3.08679   GCGTCCTATTCAACA                TTTAT TAT ATAAA                AATTATATAGTTATA  47 36
 JI729_15410 NONE
 JI729_15405 3020199 .. 3020214 -  -3.2  -2.76823   AATCTCTAAAAAAGG              GAGAGC CAAA ACCCTC               TTAATTTTTAGCAGT  43 26
 JI729_15400 NONE
 JI729_15395 NONE
 JI729_15390 NONE
 JI729_15385 NONE
 JI729_15380 3017958 .. 3017973 -  -6.8  -3.93695   TTTAGTATTTAGAAA              GAGGGC CGAA ACCCTC               CGTTATTATTCTTCG  71 31
 JI729_15375 3017483 .. 3017497 -  -5.8  -3.16564   TGGCCATGCGATCAA               TAATAG TGC CTATTA               CATGCTTAGGTTCGT  57 23
 JI729_15370 NONE
 JI729_15365 NONE
 JI729_15360 3012407 .. 3012426 -  -2.1  -3.10112   AGTGAATTCATCTAA            CGTCATT GTTCTG AAAGACG             CGTATGCAATGTTTC  42 435
 JI729_15350 3006838 .. 3006862 -  -3.6  -3.77206   TAGAATTGGATTAAA          GTGAACTGAT ATTAA ATCAATGCAC          TTCGTCCACTTCTTT  54 17
 JI729_15345 3005975 .. 3005995 - -12.7  -5.47399   TTAACCCGAAAAAAA            GAGTCTTCA TTA TGAAGACTC            TTTTTCTTTTATTAA 100 37
 JI729_15335 3004561 .. 3004595 -    -8  -3.16564   GGCTCACCGTATTAA     TTATTCCTCTTCAACT CAA AATGGATGAGGAATAA     TTCTGTACCTTAGTC  68 167
 JI729_15330 NONE
 JI729_15325 3001712 .. 3001725 -  -2.3   -4.7173   TATTACACGTAAAAA               TGGTG AAGT CACCT                TTCTCGGTTAAAAAT  61 236
 JI729_15320 3000626 .. 3000643 -  -9.9  -5.60689   GTATATAACAAAAAA             GCATTGG ATAC CCAATGC              TTTTTACACTTACGC 100 35
 JI729_15315 2999727 .. 2999752 -  -2.6  -3.55173   ATTAGAACAGGAGAA         TGTGGCTG TAGCTTTAAT CAACCACA          TTTAAGGACAGTAAT  48 112
 JI729_15305 2997070 .. 2997097 -   -15  -3.68351   GTGTTACTAGTGAAA        GAGGACCTGATA TGAA CATCAGGTCCTC         TTTTACTATATAATT 100 137
        cypD 2993276 .. 2993305 -   -13  -3.60475   AATGTCTATGTGAAA       CAGGACCCGATA GATGCA TATCAGGTCCTG        TTTTTTATTTAGTAG 100 149
 JI729_15290 2988733 .. 2988777 -  -7.4  -5.30616   GTATTCAAACAAAAA CACCTCCATTACATTTGCACAC TTA GTATGCGAATGCAA-G-AGGTG TTTTTTCATATACCA  86 89
 JI729_15285 2988252 .. 2988277 - -10.5  -5.14626   ACTATCAAAATAAAA         CCCCAGAAATCC AAT GG-TCTCTGGGG         CTTCCTTATATATTT 100 31
 JI729_15280 2987664 .. 2987675 -  -5.8  -6.04378   AAAGCATAAAAAAAA                CACC CTAA GGTG                 CTATCCTCCGACTTG  93 177
 JI729_15275 2986923 .. 2986944 -  -3.7  -5.15682   AAAACATAAAGAAAA           GGCATTCCA AATA TGAAACACC            TTCTTTCGTTTTATA  70 104
 JI729_15265 2985967 .. 2985985 -  -8.1  -4.57353   CTTTAGGATAGAAAA            GGAGCCGG AATT CCGGC-CC             TTGTTTTTAATGAAA  85 79
 JI729_15255 2982897 .. 2982923 - -13.9  -5.36441   TTTTCACATAAAAAA         GCCTCTTTCTA AAAGA TAGAAAGAGGC         TTCTGTATATACAGT 100 233
 JI729_15250 2981625 .. 2981653 - -12.5  -5.08824   GTGTTACGCAAAAAA        GAAAGGGAGTGGA TCC CCCACTCCCTTTA        ACCATCTACCCCTGA 100 31
 JI729_15245 2980900 .. 2980918 -  -4.6  -5.81412   TTGATGTAAAAAAAA             TGCTTC TTTTATC GAAGCA             ATTTAAAAAAATGAT  90 15
 JI729_15240 2978854 .. 2978877 -  -9.6  -3.87576   CGAGAATAATGTAAA          TAAGCTGTCC ATGT GGGCAGCTTA           TTGTTTTTTGCTTAG  90 140
 JI729_15230 2976853 .. 2976876 -  -9.8  -3.47896   CAACTAATTAATCAA          GTTTTTTTGA TTTA TCAAAAAAAC           TTCCTCGCATCCTAT  81 355
        arsR 2976430 .. 2976451 -  -4.6  -2.69151   CCTCTTTATATATTA           TTAATCAA TTTTTT TTGATTAA            TTACTCAAAATTTTA  49 38
 JI729_15220 NONE
        arsB NONE
        arsC 2974434 .. 2974466 - -16.5  -5.88565   TGTACAATAAAAAAA      GAGCCAATCCCCTAT AAG ATAGAAGATTGGCTC      TTTCCTTTATTTACT 100 36
 JI729_15205 2973341 .. 2973379 -  -9.1  -3.26405   TTCATGCAAAAATTA  CAGTAGCCTTCTATCTAT GTAG AT-GAAAGAAGGCTACTA   AATCTTTTTTAAAAT  78 154
 JI729_15200 2971883 .. 2971899 -  -3.7  -5.38321   AAATAGGATAAAAAA              GAAAGCA AAT TACTTCC              AAACAACACCTCGCC  76 457
        menA 2970660 .. 2970695 -  -9.1  -5.71295   ATACAAAAATAAAAA    CCCCAATCTCTCTAT ATTAAA ATTGAGAAACTGGGG     TTAAGTTATTTAACC 100 52
 JI729_15185 2968768 .. 2968791 - -15.4  -3.76411   CGAAAATTATGTAAA          TAAGCTGCCC ATAT GGGCAGCTTA           TTGTATTTTTTGCTT 100 342
 JI729_15170 2965499 .. 2965510 -  -2.2  -3.30124   GTTTATTTTCCATAA                GAGA ACTA CCTC                 CTTAGATAAATGATT  44 102
 JI729_15165 2963146 .. 2963158 -  -3.5  -3.85909   TTACTTAAATGTAAA                TATAT AGA ATATA                ATTGGAATATTAATC  54 288
 JI729_15160 2962585 .. 2962608 -   -14  -2.87132   GGGCTTTTGTATACA          TAGAGACACC CAAA GGTGTCTCTA           TGCTATTTAAACCAT 100 78
 JI729_15155 2960616 .. 2960652 -   -14  -4.72631   AGCAACCTAAGAAAA    GCAAATACCCTAAACA TTTTT TGTTTAGGGTATTTGT    ATATACTTCCAAATA 100 216
 JI729_15145 2958563 .. 2958578 -  -3.2  -2.85257   TTTGAAACATATAAC              CCACCT CCAT ATGTGG               TAACCTTCTCAAGCT  43 220
 JI729_15140 2957604 .. 2957627 -  -9.7  -4.02396   TAAATAAAATTTAAA          TTGGTTTCC TGGTCT GGAAACCAA           TTTTTTGTAGTTGAC  90 494
 JI729_15135 2957346 .. 2957373 -  -4.8  -5.47159   TGCAACAAACAAAAA        GGATCCCCCTTC TCTT AAAGGCCGATCC         TTTTCTCCTTGTATG  81 54
 JI729_15130 2956629 .. 2956641 -  -2.7  -3.90744   TTTCCCTCCAAATAA                CTCAT TCT ATAAG                ACTCCTTTCTAACTT  52 256
 JI729_15125 2956380 .. 2956399 -  -6.6  -3.87869   CTAATCTGTTATAAA            TCAAATTA CATG TAATTTGA             TTATTGTTTTGGCAT  71 26
 JI729_15110 NONE
 JI729_15105 2953123 .. 2953144 - -11.7   -5.1286   TAAAAATGATAAAAA           CGTGTAGAA AAAA TTCTACACG            TTTTTATTTAAATAG 100 19
 JI729_15100 2952272 .. 2952308 - -14.1  -5.80951   ACCCAAAATAAAAAA    TACTATTCTTTCTAATT AAG ATTTAGAAAGAATAGTA    TTTTTCTATTTACCT 100 47
 JI729_15095 2951135 .. 2951164 -  -5.9  -3.68007   TACATAAACGAAAGA       GTCGATTTCTTTAT AAA AT-AGGAAATCGAC       TTTTGCTTAATTATT  62 83
 JI729_15090 2950019 .. 2950076 - -21.1  -5.93809   TTCCCATAAAAAAAA CCGACAACTTCCATAATTCAATGAT TTTATATC ATCATTGAATTATGGAGATTGTCGG TTTCCCTTCAACTAA 100 456
 JI729_15085 NONE
 JI729_15080 2945745 .. 2945764 -    -8  -3.09581   GAAACTTTTAAGATA            GTAACAAT AATA ATTGTTAC             CAGTTTTTCCAGCGT  68 22
 JI729_15075 2945124 .. 2945142 -    -4  -4.11216   TTCTGATTCTTAAAA             CATAATAA AAT TTATTATA             CAACAACAATTTATA  59 68
 JI729_15070 2943547 .. 2943557 -    -4   -4.1891   CTTTTTTAATAGAAA                 GTTT TAG AAAC                 TCTATTTGATTCGTG  59 137
 JI729_15065 2943026 .. 2943050 -  -6.5  -5.09685   TAACACACATAAAAA          CTCGAGCAT TTTTATT ATGCTCAAG          TTTTTAGTTCCGTCT  81 41
 JI729_15060 2942153 .. 2942204 -   -25  -2.92653   GGACAATTGGAGATA GCAAATAAATAAAAGAGCCAATTC GTAC GAGTTGGCTCTTTTATTTATTTGC TATCTATCGTTTGGA 100 73
 JI729_15050 2939595 .. 2939613 - -10.4  -6.11229   AGGAAAATAAAAAAA             CACTCTTT TTA AAAGAGTG             CTAAAAAACATATAA 100 99
 JI729_15045 NONE
 JI729_15040 NONE
 JI729_15035 2937194 .. 2937237 -  -3.2  -4.84219   AAATTACAAAATAAA TGCATAGGAGGTCTTATTCT TTAA AAAGGAAGACCCCCTATATA TTAGTTATTTTTATT  64 155
 JI729_15030 2935945 .. 2935980 - -13.5  -4.42062   TAGTTTTTAAACAAA    GATTAGAGCCCTCCT ACAAGA AAGAGAGCTCTAATC     TTTCATATGAATTTT 100 167
 JI729_15025 NONE
 JI729_15020 2933810 .. 2933830 -  -7.5  -4.27316   CTTTCTAAGTCAAAA            CCACCGGTA TAA TGCCAGTGG            TTTTCTTTCTGCAAT  77 304
 JI729_15005 2931047 .. 2931074 -   -15  -4.78107   TATCACCATTAAAAA        GATGCTCCTGGA TTTA TCCAAGAGCATC         TTTTATAAAGCTTTA 100 89
 JI729_15000 2929072 .. 2929114 - -12.2  -5.72207   TTCAAATCAAAAAAA TAGATTACCTGCACACGAAA AAG TATAGTGCACAGGTAATCTA TTTGTTTTTGAGATT 100 50
 JI729_14995 2927097 .. 2927138 - -13.2  -3.53224   CATCTGTGCCCGAAA GCGCAAAAAACACCGATGC TTTTC GCTTCAGTGTT-TTTGCGC TTTACATATTGTAAG 100 173
 JI729_14990 2925202 .. 2925236 -    -8  -4.83169   ATTCCTTTAGAAAAA     CCCAAATTTCTCAA TTTAATG CTGAGATATTTGGG     TTTTAATATAGGTAT  85 343
 JI729_14975 2921613 .. 2921638 -  -6.3   -5.2204   TAGAACCAAGAAAAA         TATTCAGAC ATATTGCA GTCTGAATA          TCCTTCTTATTACAC  82 35
        glsA 2920474 .. 2920501 -  -5.7  -4.78149   TTTATAACTCAAAAA        TGTTCAGAC ACAATATAAG GTCTGAACA         CTTTTGGACTCGCTC  75 67
 JI729_14965 NONE
 JI729_14960 2917768 .. 2917786 -  -7.5  -5.95539   TCTTAAAGAAAAAAA             GATGCTA GAAGA TAGCATC             TTTTTTTAAATTCAA  95 283
 JI729_14955 NONE
 JI729_14950 2914613 .. 2914626 -  -2.3  -3.90316   ATCCTGTTAAAAATA               GAAGC AAAA GCGTC                CATAACAAAGCCAAA  51 69
 JI729_14940 2912187 .. 2912200 -  -5.3  -3.25356   CTATAATTAAGTTAA               GAGTT CATT AACTC                TATCTTAAACTTGAT  56 76
 JI729_14935 2910897 .. 2910910 -  -3.9  -3.34902   CTTTACTACATAATA               TTTTC TTAA GAAAA                ATATTTATTTTAATA  49 30
 JI729_14930 2910251 .. 2910269 -  -4.6  -5.53991   CATGCATTAAAAAAA             TGAAGAGA CTT TCTATTCA             TAGAACTATTAAAAA  85 156
 JI729_14920 NONE
 JI729_14915 2906911 .. 2906924 -  -3.9  -3.62275   ATTTACTATTTTAAA               GTTAA GTGT TTAAC                CTTGAAGTACTTAAA  52 13
 JI729_14910 2906486 .. 2906509 -  -7.6  -5.05577   AAATTAAAGGAAAAA          TAATCCATAT ATAT ATACGGATTA           TTTTCTTAGTGTACT  90 31
 JI729_14900 2903890 .. 2903901 -  -4.4  -4.19307   TAGACAAATCACAAA                CTCT TCCT AGAG                 TAATAAGTCCAGTAT  59 106
        hblC NONE
        hblD NONE
 JI729_14885 2898432 .. 2898467 - -12.7  -2.76261   ATACTTATATATAAT    TGAAAGGCGAAGTCT TTAATG AGACTCCGCCTTTCT     GTTATATAAGGATTT 100 123
        hblA 2896272 .. 2896300 - -10.5  -5.10077   AAATAGTTCAAAAAA        GATAATAGTAACC GTT GACTACTATTATC        TTTTTTCTTTAAGTT 100 514
 JI729_14875 2893626 .. 2893637 -    -3  -3.02371   TCTTGTAAACAACGA                TAGA AAGT TCTA                 TTCAGTTTTTGTTTA  44 92
 JI729_14870 2893126 .. 2893156 - -14.2  -4.82667   TTACGATATTAAAAA       CATCCTTTCTTTTG GTT CTAAAGAAAGGATG       TTTTTATAACATGCT 100 305
 JI729_14865 2891425 .. 2891437 -  -2.7  -3.53012   CTCCTCCCTGTTAAA                TTCAA TCA TCGAA                ATCATTTCTTGATAG  46 14
 JI729_14860 NONE
 JI729_14855 2888851 .. 2888885 -  -9.4  -5.34655   CAAGGAAAAATAAAA     GGAAATGAATCCAGTA TTA TACTAGGCTCATTCCC     TAGAGGCTACTTAAT 100 381
        ansA NONE
        aspA 2885308 .. 2885329 -  -5.8  -5.50499   CTATATTGAAAAAAA           GAGGAAGG GCTTGT CCCCCCTC            TTCTTTTAATTTTTC  88 31
        sasP 2882147 .. 2882168 -  -6.7  -3.78607   ATATCATAATAAATA           TTGATTTCA ATAT TGAAACCAA            ATTTTTAAGTATGCT  69 258
 JI729_14805 2881555 .. 2881582 - -14.4  -5.14477   GATACATCTAAAAAA        TAAAAAAGTGGC CAAC GCCACTTTTTTA         TTTTTGTTTATTAAG 100 36
        ppsA 2876043 .. 2876079 - -19.1  -3.52668   AATTCAGCTATATAA    TAAAAGAACATCCACTA TAA TAGCGGATGTTCTTTTA    TTTCATTACAACACT 100 31
 JI729_14775 2874029 .. 2874054 - -14.9  -5.15634   GATTTCATCAAAAAA         GCTGTTTCACT AATT AGTGAAACAGC          TTTTTTAAGCGTTCA 100 30
 JI729_14765 NONE
 JI729_14760 NONE
 JI729_14755 2871101 .. 2871118 -  -8.5   -6.0427   ATCATATAAAAAAAA             GCCTATT TTAA AATAGGC              TTTTTCTACTACCTC 100 34
 JI729_14750 2869630 .. 2869655 -  -7.6  -4.86731   CGCTTTTAAACAAAA         GAAGCCCTCT TTTTAC AGACGGCTTC          TTTTTTATAACTTTA  88 54
 JI729_14745 2868661 .. 2868693 -  -7.9   -5.4505   TTTTGTAAGAAAAAA      GGTATATTTTTCATA TGT CACGAACAATATACC      TTTCAAAACACGAAT  95 40
 JI729_14740 2867706 .. 2867743 -    -5  -3.14881   CAATGTTTTGACTAA   TAAGAAAAGTTCCTAT TTAAGG ATAGGTTCCTTTCTTA    TGTTAATCTCCCTTC  54 28
 JI729_14735 2866363 .. 2866393 - -21.4  -5.07275   TCATACACATAAAAA       GCACGGGTTTGATT ACT AATCAAACCCGTGC       TTTCAAAACAACTAT 100 76
 JI729_14725 2864953 .. 2864969 -  -8.7  -5.33848   ACCATAATGAAAAAA              CCCGTCA TTT TGACGGA              CTTTTCTAATTTCAA 100 37
 JI729_14720 NONE
        lepB 2863494 .. 2863518 -  -7.9  -5.72053   TAAGCAAATAAAAAA          GCATGGAAGAA TAT CTCTCCCATAC          TTCATCACACTTTAT 100 37
 JI729_14710 NONE
        pxpB NONE
 JI729_14700 2860886 .. 2860897 -    -3   -2.6583   CACAGTTTAAATCGA                TTGT AGTC ACAA                 TGTATTCCTCCTAAT  42 36
        pxpA NONE
 JI729_14690 NONE
 JI729_14685 NONE
         pcp 2857704 .. 2857714 -    -4  -3.54543   ACGTACTTCTTCAAA                 TTGT TGC ACAA                 AAATCACCTCTATGT  53 99
 JI729_14675 2856953 .. 2856970 -  -9.9  -5.65927   TACCCAAATAAAAAA             CTGAGGT GGAT ACCTCAG              TTTTTTCGATAATTT 100 39
 JI729_14665 2853866 .. 2853898 -  -7.1  -4.20888   TTAACTCAAAAAATA      TATCACTGCACAATA TGT TTCCATGCAGTGATA      CTATTTTTACTGTGC  77 32
        lepB 2853260 .. 2853274 -  -5.8  -4.86731   GTTTTTTAAAGAAAA               TAAAGT GAA ACTTTA               ATAAGTGGGGTTTTG  77 53
 JI729_14650 2851787 .. 2851805 - -14.6  -5.10461   TGTAGCTAACAAAAA             GAGGTGGC AAA GCCACCTC             CTTTTTGCTCCGTTT 100 181
 JI729_14640 2850387 .. 2850407 -  -6.9  -5.29716   CGAATATAATAAAAA            GAAACCTAA ATT TAAGGTTTC            CCATTTTTACCAACA  84 50
 JI729_14635 2849138 .. 2849179 - -20.5  -3.63895   TTTAAGTATTTTAAA CAAAACCGCTTATGCTTCA AAAA TGAAGCATAAGCGGTTTTC  CTTTTGAATACAGAA 100 83
 JI729_14615 2845338 .. 2845359 - -10.2  -5.73339   ATAACTATAAAAAAA           TACCGCTC AATTTA GAGCGGTA            TTTTTTATTTTTCTA 100 30
 JI729_14605 NONE
 JI729_14600 NONE
 JI729_14595 NONE
 JI729_14590 2840825 .. 2840841 -  -2.4  -3.22448   CTAAAGTTAATTTAA              TTATAA GAGAA TTATAA              CTATAAATAAAAGGC  44 65
 JI729_14585 NONE
 JI729_14580 2838794 .. 2838808 -  -2.8  -3.01003   TTAATATATTATATA               CTTTCA TTA TGTAAG               CCTTTCATCGCTAAA  42 52
 JI729_14575 NONE
 JI729_14570 2837082 .. 2837114 -    -2  -2.67803   TGTCCATTAAACTCA      CCTCCAAAACAT TTTATTAGT ATGGTTGGGAGG      TGTTGGTTTTATGTA  39 48
 JI729_14565 2836714 .. 2836743 -  -6.6  -4.65263   ACTTCGCAAAACAAA       GAAGAGAATATC GTAATG AACATTCTCTTC        TTGAGGTTTACCCGT  78 41
 JI729_14550 2833486 .. 2833512 - -11.7  -5.69262   TTACAAAAACAAAAA         GGATCTCCTTC TATAT GAAAGAGATCC         TTTTTACTGTTAACT 100 35
 JI729_14540 NONE
 JI729_14535 2832058 .. 2832068 -  -2.6  -2.91264   CCTTTTATCTACACA                 TTTT TCA AAAA                 TAAAACTCTACTCAA  42 8
 JI729_14530 2831771 .. 2831781 -    -4  -2.82529   TTAATTTAATAGAAT                 TTGT GAT ACAA                 TCCAATCGCCATTAA  47 102
 JI729_14525 2830970 .. 2830994 -  -7.9  -4.68512   TCACAACAAAAAGAA          CCATCCTAGAA TAC TTTTAGGACGG          CTTTCTATTCGTAAT  83 139
 JI729_14520 NONE
 JI729_14515 NONE
 JI729_14510 2827904 .. 2827932 - -14.8  -2.65815   GGTAGATTCATATTA        GGACTCTGTTTA AGCAA TAAACAGAGTCC        TTTTTTCACAAGATT 100 46
 JI729_14500 NONE
 JI729_14495 2825731 .. 2825761 - -13.4  -3.74747   TGAAGGCTTATTAAA       GTAAAAGAGGTGCA ATT CGCACCTCTTTTGC       ATGTATTAATAGGTT 100 39
 JI729_14485 NONE
 JI729_14480 NONE
 JI729_14475 2822061 .. 2822089 - -12.6  -5.38047   TACTTATACAAAAAA        GATGACTTCAGC CATAT GCTAAAGTCATC        TTTTTCTACCTTATT 100 39
 JI729_14470 NONE
 JI729_14465 2821199 .. 2821218 -  -2.2  -3.53811   TGTACTTCTCCCAAA            TACATG TTTAAACT CATGTA             TTGGCCTCCCTTTGT  45 19
 JI729_14460 NONE
 JI729_14455 2819063 .. 2819089 -  -6.5  -5.15634   TAGTTTACTAAAAAA         CCTTGAAAGGC AGATA GCCAATCAAGG         TTAAATAACTACTCA  81 34
 JI729_14445 2816747 .. 2816778 -   -14  -5.19879   TCCCAAACACAAAAA      TAGTGGTAG-TTGGA TTC TCCAAACTACCACTA      TTTTTAACCTCTTAA 100 108
 JI729_14440 NONE
 JI729_14435 2815340 .. 2815372 - -13.7  -4.46617   AAAACAAACTTAAAA      GGAATGAATTCTTTA CTA TACAGAATTCATTCC      TCACTAGTTGCTTAA 100 165
 JI729_14425 2813265 .. 2813296 - -11.8  -5.19879   TCGCAAACACAAAAA      TAGTGGCAG-TTGGA TTC TCCAAACTACCACTA      TTTTTAAATTCTTCA 100 108
 JI729_14415 NONE
 JI729_14410 2811481 .. 2811520 - -20.4  -3.75897   AATTTTCAATTGAAA  TCAACAAAAGAGACCTCA AATG TGAAGTCTCTTTTGTTGA   GTCTTTTTCATCTAT 100 169
 JI729_14405 NONE
 JI729_14400 2809134 .. 2809165 -  -8.2  -5.09225   ATTGCACGCAAAAAA      GCACCT-ATTGTC GTATATT GACAATGAGGTGC      TTAACTCAATCCAAC  93 167
 JI729_14395 NONE
 JI729_14390 NONE
 JI729_14385 2806197 .. 2806228 -  -6.7  -5.36441   TTTCCATATAAAAAA      GAAAAGGTGAATA TTTATG TATCCACCTTCCC       ATCTCCCTCTACCCA  89 8
 JI729_14380 2805419 .. 2805455 -   -14  -5.30616   GCATGCAAATAAAAA    GAGAACATGTTTTCAT TTTTT ATGTAAACATGTTCTC    TTAAACATTTAAAAT 100 92
 JI729_14375 2803922 .. 2803943 -  -5.2  -5.48213   TATCCAAAATAAAAA           GAATGTCA TGTAAC TGACATCC            TTTTTATTTTTATCG  82 179
 JI729_14370 2801948 .. 2801985 -   -16  -3.96068   TTATGCTAATAATAA   GAAAGATCCTATAAAA TAAAAT TTTTATAGGATCTTTC    CTTTTAATATTGCTT 100 29
 JI729_14365 2801258 .. 2801299 -   -12  -5.41746   AATCTCTCAAAAAAA GGTAAACAAACATATT CCATAAAGCT AATATGTTTGTTTACC  TTTTTCTATTTCAAA 100 89
        colA 2798108 .. 2798163 - -11.4  -5.00138   TATTTAAATTAAAAA TATAAAGCCAACATATCCCTGTTCTA TAAT TAGAACAGGGATATGTTGAATTAGTT TAATGTTTAACATTA 100 99
 JI729_14350 2795090 .. 2795129 -  -7.4  -5.37345   TTCAACTATAAAAAA  TGCACTCCAATTGT AAACTATCCCCA ACAATTAGAGTGCA   CTTTATATAAAATAT  90 53
 JI729_14345 2793843 .. 2793861 -  -7.5  -6.28401   TAAAAAACAAAAAAA             GTCCTAA TTTCT TTAGGAC             TTTTTTAAATAAATT  95 30
 JI729_14340 NONE
 JI729_14335 2789595 .. 2789643 - -12.3  -3.94868   TATAATAAATTGAAA TAAAAAAGTAAAAACTTCTTCA TGTATT TGAAGAAGTTTTTACTTTTC-A CTTACACTGAATTAA 100 134
 JI729_14330 2788871 .. 2788887 -  -9.5   -5.4833   TGACCGAATAAAAAA              GATGGTT TGT AACCATC              TTTTTTGTCTTTACA 100 89
 JI729_14315 2785045 .. 2785087 - -13.2  -3.21394   AACGAAAGAAATAAC GTAATAAAAAGACTCCTAT TTTTTC ATAGGAGTCTTTTTAT-AC TTCTACGTTGCTTTT 100 40
 JI729_14295 NONE
 JI729_14290 2780443 .. 2780454 -    -3  -3.86015   TATCCCTTGTAGAAA                TAGA TTTT TCTA                 TAAGGGATTTTTCCG  52 373
 JI729_14280 NONE
 JI729_14275 NONE
 JI729_14270 2778367 .. 2778377 -    -4  -3.57144   CCTTCTATTTTCAAA                 TCAT TCA ATGA                 CTAAATCCGCCCTAT  53 15
 JI729_14265 2777714 .. 2777751 -  -9.4  -5.04987   AAGAGTTCTAAAAAA   TAAAGACTGTACCTTT AAAATG AAAGATTCAGTCTTTA    TTAATAACTTTTTTT 100 39
 JI729_14260 2777048 .. 2777076 -    -4  -5.97979   ATAACAATAAAAAAA       GGGTGCTAAATCA TATG TGATTTA-CATCC        CTAATTTGTGTGTTA  89 105
 JI729_14255 2775873 .. 2775904 - -13.2  -3.28505   TTAGGAATAACAAAC      TAAAACGCTCAGAA GATA TTCTGAGCGTTTTT       ATTTCCTTCTTCAAC 100 65
 JI729_14240 2773089 .. 2773118 - -13.1  -5.61913   AATAAACATAAAAAA       TTGCCA-CCAGTTA GCT TAACTGGTTGGCAA       TTTTTTAACGAGAAT 100 30
 JI729_14235 2771586 .. 2771605 -  -5.1  -3.87364   CCGATAACAACATAA            TATTCGT TATAAT ACGAATA             TTCAATCTTTTTCAA  63 240
 JI729_14230 2769088 .. 2769122 - -14.4  -5.68489   CACAAGAAGAAAAAA     GCTGCAATCAGTCAGT TTC ACCGACTTATCGCAGC     TTCTCTTCTTTTTAC 100 47
 JI729_14225 2767758 .. 2767788 -  -5.6  -5.27335   CTTTTGAAACAAAAA      CTCCCCTTAAATC GAAAAT GATT-AAGGGGAA       TTTTATATACGATGC  81 43
 JI729_14210 NONE
 JI729_14205 2762504 .. 2762535 - -13.2  -4.03078   TCACTACATGATAAA      CGGCCAAACTCATAT AAA AT-TGAGCTTGGCCG      TTCCACTTTTTAATT 100 105
        proB NONE
 JI729_14190 2758523 .. 2758555 -   -13  -3.35349   AAATAATTTTTATAA      TAAAAGACACCCAA GCCAA TTGAGTGTCTTTTA      TTATTATTTTCGAAT 100 29
 JI729_14175 NONE
 JI729_14170 NONE
        hmoA 2753336 .. 2753358 - -10.7  -4.21768   GAATTAATGTGAAAA           GACAGACTA TTTAT TAGTCTGTC           TTTTTTACTTTACAG 100 123
 JI729_14140 NONE
 JI729_14135 NONE
 JI729_14130 NONE
        lsrB 2744969 .. 2744987 - -10.3  -6.02919   GCAGAAATAAAAAAA             CGTCCGA TATAT TCGGACG             TTTTTTTGTCTACTA 100 38
 JI729_14115 2741905 .. 2741926 -  -7.3  -5.16572   ATGTAATTCAAAAAA           TGCTTAGGA TTTC TCCGAAGCA            TTTTTTGTATGTTAC  86 122
 JI729_14105 2740654 .. 2740677 -  -5.5  -3.07431   AAAACATTTGCAACA          GTATATTAA TATTGT TTAATATAC           CGTTATTAAAACTCC  57 129
 JI729_14100 2738886 .. 2738920 -    -3  -5.52384   CTTCTACTAAAAAAA    TAAAAGCCAG-CCTC AATAAA GAGAACTGACTTCTA     TTTGGATAATTATTG  78 44
 JI729_14095 2738466 .. 2738492 - -16.8  -5.14563   GTTGCGATTAAAAAA         CAAGCCTAACAT AAT ATGTTAGGCTTG         TTATATATTTTGTAT 100 26
 JI729_14085 NONE
 JI729_14080 NONE
 JI729_14075 2736423 .. 2736443 - -11.2   -5.4505   TTTTCTAATAAAAAA            CTGCCTCT TATTT AGAGGCAG            CCACTTTTAAGTCTT 100 12
 JI729_14065 2731817 .. 2731843 - -15.3  -5.30339   ACTAAAATACAAAAA         GTCCCTACTGA ATAAA TCAGTAGGGAC         GATATTTATCGCGGT 100 360
 JI729_14060 2730027 .. 2730052 - -16.3  -5.24129   TTTTTGTACAAAAAA         GTCCCTACTGA GCGC TCAGTAGGGAC          GATATTTATCGCGGT 100 247
        aroC NONE
 JI729_14050 NONE
        tyrA NONE
        aroA 2725266 .. 2725286 - -10.5   -5.7946   GTTTCAACAAAAAAA            GCAGATACA TCA CGTATCTGC            TTTCCATCCTTTTTA 100 38
 JI729_14035 2723968 .. 2723997 -   -13  -2.87018   CACAATATAAGAGGA       GGCTATCCCAAA ATTTCA CTTGGGATAGCC        CGCCTTCATACATGC 100 44
 JI729_14030 2723128 .. 2723154 -  -7.5  -2.57132   TCCTGTCCTTATAAC        GCTA-TAGAATC AAAT GATTCTAATAGC         ATTCCAACAACTTTC  62 8
 JI729_14025 2719743 .. 2719766 - -10.4  -5.14477   TATATACCGAAAAAA          CTGTAGAGAA ATCA TTCCCTACAG           TCTCTTCTTATTTCG 100 33
 JI729_14020 2717800 .. 2717819 - -12.2  -5.60993   TTCTCGACAAAAAAA            CTCGCTCT AAAA AGAGCGAG             TTTTTTCATTATATA 100 41
 JI729_14015 2715299 .. 2715332 - -19.9  -3.95073   TGGTATATTTACAAA     TAAAAGGCGCTATTC ATAT GAATAGCGCCTTTTA      TTATTTAGCTTCCCC 100 26
 JI729_13995 2712340 .. 2712360 - -10.5  -4.96848   CTTCTTATATAAAAA            TCCCTACAA ACG CTGTAGGGA            TTTATGTCTAAATCA 100 77
 JI729_13990 NONE
 JI729_13985 NONE
 JI729_13980 NONE
 JI729_13975 2709461 .. 2709477 -  -2.3  -3.31232   TCTTTCATACAAAAC              TTCCTCT CTT AAAAGAA              CAACACCATATGTTC  44 17
 JI729_13970 2708881 .. 2708916 -  -2.7   -5.1963   GCGAACGAATAAAAA   CAAACGCCTCCTTTAAT TATT ATTTA-GG-GGCGTTCG    TTCATTCAAAAATTA  69 38
 JI729_13965 2707557 .. 2707584 -  -9.3  -5.14563   CTTTCTATGAAAAAA        GACTAGCTCTT AATAAA AAGAGCTAATC         TCATTACGCCGTTAT 100 29
 JI729_13960 2707071 .. 2707081 -  -2.6  -2.87026   GATACCTATATTATA                 TAAT GAA ATTA                 TTATTTTTTTCAAAC  41 74
 JI729_13955 NONE
 JI729_13950 2705107 .. 2705130 -   -14  -3.92267   TATACATAGACGAAA          GAGCTCATCA CAAA TGATGAGCTC           TTTGTTTACTTTATC 100 36
 JI729_13945 NONE
 JI729_13940 NONE
 JI729_13935 NONE
 JI729_13930 2701638 .. 2701686 - -15.8   -3.5361   TAATGATTTATACAA GTACATAATAAAAACTCCTTCT TATTT AGAAAGAGTTTTTATTATGTAA CTAACAGCACTATTA 100 38
 JI729_13925 2700646 .. 2700681 - -20.8   -5.7946   TGTGCAATAAAAAAA    CCAAAGGCATTTTATC AACA GATAAAATGCCTTTGG     TTTCTCCAATCGGCA 100 377
 JI729_13920 NONE
 JI729_13915 NONE
 JI729_13910 NONE
        ssuD 2696367 .. 2696392 - -12.7  -5.76237   TATATAAATAAAAAA         GACTAGTGTGC GGCT ACACACTAGTC          CACGTAACTTAGCAG 100 402
 JI729_13895 2694155 .. 2694181 - -12.4  -4.99043   TTTTTATAAACAAAA         GATACACCACTT AAA AAGAGGTGTATC         TTTCTCAGGTTTTAC 100 40
 JI729_13855 2691378 .. 2691405 -  -9.3  -5.60993   TCTTTTACAAAAAAA        GAGAATCATTC GTTTAA GAATGACTCTC         TTTCTAAAATTTCGA 100 29
 JI729_13850 NONE
 JI729_13845 NONE
 JI729_13840 NONE
 JI729_13835 2688835 .. 2688850 -  -7.6  -6.23317   ATAAAAATAAAAAAA              CTTCTC AAAT GAGAAG               TTTTCATATAGCATG 100 29
 JI729_13830 2688216 .. 2688231 -    -9  -5.33405   GCTACGAAATAAAAA              GCTGAC TTTT GTCAGC               TTTTAAAAAATGGCA 100 21
 JI729_13785 2681203 .. 2681227 -  -4.9  -5.99154   TATTAAACAAAAAAA          GGCTATGGGAA CTT CCCCCCTAACC          TGAATAAATATTTAC  91 40
 JI729_13780 NONE
 JI729_13775 2679998 .. 2680017 -  -5.6  -5.37593   GCGCAAACTAAAAAA            GCCGCCTA TTTA TTGGCGAC             TTCAATCTTTTTATA  85 11
 JI729_13770 NONE
 JI729_13765 2678505 .. 2678530 - -12.7  -5.12474   CATAACATATAAAAA         GGACTGCTTAC AAAT GTAAACAGTCC          TTACATTCATTTTCG 100 32
 JI729_13760 2678031 .. 2678049 - -11.7  -5.37043   ATGTCATATAAAAAA             GCTGCCC AAAAA GGGCAGC             TTCAAATATGTATAT 100 40
 JI729_13755 2677558 .. 2677589 - -10.2  -5.88197   TGAAACAGAAAAAAA      CCAGTAGGAAGTGA TTAC TCTTTTCCTACTGG       TTAAAATAAAATTAT 100 37
 JI729_13745 2676549 .. 2676573 -  -7.2  -4.93968   ATTTACAACTAAAAA          CACCTCATTT AAGGA AAGTGAGGTG          TTTTTGAAATCACTT  85 47
 JI729_13735 2673329 .. 2673363 - -11.6   -5.4251   CCTACATACAAAAAA     GGCTCTTACACACCTT ATG AAAATGTGCAAAAGCC     CTTATATATCAAGAC 100 34
 JI729_13730 NONE
 JI729_13725 2671833 .. 2671847 -  -2.8  -2.62983   TTTACTGTCAGACTA               TGTGGA TGT TCCATA               CTGATTTCTCCCTTC  40 43
 JI729_13720 NONE
 JI729_13715 2669548 .. 2669571 - -15.4  -4.84527   CGTACATACGAAAAA          GCTCCTTTCC AATT GGAAAGGAGC           TTTTTCATTACGCTT 100 33
 JI729_13700 2667354 .. 2667379 - -11.9  -3.28712   TTCCCCCTTGGAGAA         GAGCAGTTAGC TTTT GCTAGCTGCTC          TTTTATTTTTTCAAA  95 182
 JI729_13690 2665363 .. 2665386 - -11.1  -5.17786   TAATAAAATTAAAAA          GCTGTCTTC TAATAC GAAGACAGC           TTTCCTTTACTTCAC 100 234
 JI729_13685 NONE
 JI729_13680 2664352 .. 2664389 -  -8.6  -4.10657   TTATACTGTTTAAAA   TTTAAAAGCCAAATCC AATAAA GGAAATGGCTTTTAAA    TTTTCGTAAAATAAC  83 196
 JI729_13675 2663191 .. 2663226 - -12.8  -3.91027   TAATCACAGATTAAA    GAAAAAAGGATTGATC AAAT GATCAATCCTTTACTC     TACTTCATTTAAGAA 100 20
 JI729_13670 NONE
 JI729_13665 NONE
 JI729_13660 NONE
 JI729_13655 NONE
 JI729_13650 2658124 .. 2658169 -  -7.2   -4.3534   CCCTAAGTACGAAAA TACATAAAAATGCTCGAGAAC CATTT ATTCT-GAGCATTTTTATGCT TATTACTTTATTTAA  77 292
 JI729_13645 2657613 .. 2657628 -    -4  -3.19091   ATATCGATTTATCAA              CGAAAA TACC TTTCCG               TAGCTATTGTTTGGA  49 50
 JI729_13635 NONE
 JI729_13630 2654884 .. 2654905 -  -8.1  -4.64657   CTAAAGCTGCAAAAA           GGACTAATA TTTT CATTAGTCC            TTTTTCACATTTATA  85 19
 JI729_13625 2653827 .. 2653852 -  -6.9   -5.1634   ATAAATAGAGAAAAA         GACAACCGATA TTTC TATCGCTTGCC          TTACATTCCATTTAT  83 40
 JI729_13620 2651767 .. 2651794 -  -8.6  -3.00918   ATTCAGACTACAAAT        TAAAGAGCTTAC TTTA GTAAGTTCTTTA         GAAAAAATATTTATT  72 36
 JI729_13615 2650763 .. 2650793 -   -12  -5.15526   ACATAAAATTAAAAA       TAAGGCAGCCGATT TTA AATCGATTGCCTTA       TTTTTTATTCATAGT 100 48
 JI729_13610 2650152 .. 2650165 -  -3.9   -4.6644   AATAGACTTCAAAAA               TTTCA CAAT TGAAA                CTTCTCTTTAATCAT  64 14
 JI729_13605 2649675 .. 2649712 -  -4.9  -5.85425   TAAACAAATAAAAAA   CGGTTCGTCTATCATGCC CTA AACATGAATGAC-AACCG   TTTTCCAGCTTCTTC  91 60
 JI729_13600 2648934 .. 2648956 - -12.2  -5.80364   ATTCCAATAAAAAAA           CAATCCATTT TTA AAATGGATTG           TTTTTTTATTTCTGT 100 215
 JI729_13590 2647501 .. 2647529 - -14.1  -3.09193   ACTATATTCATTCAA        TATAAAAAGCCCA ATC CGGGCTTTTTATA        TTGGCAAACTAATAT 100 21
 JI729_13580 2645871 .. 2645915 - -33.3   -5.4251   TTCATACATAAAAAA CTGCACCCCCAATTGTTAGAC GGC GTCTAACAATTGGGGGTGCAG TTCAATAGCTAACTG 100 48
 JI729_13575 2645278 .. 2645308 - -17.8  -5.95539   TGTGAAATAAAAAAA       TCCAGCCATAAGAA TGA TTCTTACGGCTGGA       TTTTGTCTATGATTG 100 32
 JI729_13570 NONE
 JI729_13565 NONE
 JI729_13560 2641346 .. 2641370 -    -8  -5.72254   TTAAATAAGAAAAAA         CAGACTATCAC ATAC GTGA-AGTCTG          TTTCCCCATTCTTTT 100 39
 JI729_13555 2640631 .. 2640646 -  -6.2  -5.70829   AATAGCACAAAAAAA              TGTTTC CATA GAAACA               CGTTAATTATACAAG  95 114
        dltD 2639250 .. 2639274 - -15.1  -5.58454   TCTATACTAAAAAAA          TCGGAACGGCT CAT AGCCATTCCGA          TTTCTATACTTTATT 100 36
 JI729_13535 NONE
 JI729_13530 2635782 .. 2635823 - -22.5  -5.43866   GAAGCCTTAAAAAAA CAAGCATCCCCCCGTCATA TACC TAGGACAGGGGGATGCTTG  TTTTCAATCAATATA 100 161
 JI729_13520 NONE
 JI729_13515 2633974 .. 2634001 -   -15  -4.84527   TGCACATACTAAAAA        GAGCTGCTGAGA TTAT TCTCAACAGCTC         TCTTCTCTACTCATC 100 32
 JI729_13490 NONE
 JI729_13485 NONE
 JI729_13480 NONE
        dapA 2626137 .. 2626151 -  -5.7  -3.64703   TCCTCCTTATTTAAA               CAGCT GCATG AGCTG               CAATATTTGATAAAA  62 6
 JI729_13470 2624550 .. 2624582 -    -5  -6.02914   TGTATATAAAAAAAA      CGGACAACTA TTATCAAACTTTC TAGTTGTCCG      CATCTTTCATTATTT  93 73
 JI729_13465 2622960 .. 2622976 -  -5.1   -2.8478   AGTATGTGATGAAAT              GGAGGTA ATA TACCTTC              TTTTAAATTAAGAAT  52 57
 JI729_13460 2622509 .. 2622533 - -10.2  -5.37043   ATTTCACATAAAAAA          CGTTTTAAAC ATAAA GTTTAAAACG          TTTTTTTATTCAATG 100 35
 JI729_13450 2620941 .. 2620977 -  -7.5  -2.87988   GATTATAATTAACTA    TTTTAACACCGCC AGAAAAATATA GACGGTGTTAAAA    ATAGTCGTTTATTAT  63 83
 JI729_13445 2620083 .. 2620104 -    -6  -5.93809   TTTTCATAAAAAAAA           TCATCTAA AATGAA TTAGATGA            TCGAAATGTATGTTT  93 44
        ppaC 2618978 .. 2619006 - -16.9  -5.73978   ATTATAAATAAAAAA        GGACAAGTAGCCA ATC TGACTACTTGTCC        TTACTGTTCATCTGT 100 52
 JI729_13430 2617776 .. 2617796 -    -9   -5.5353   GACACGAACAAAAAA            GCATCACC CTTTC GGCGATGC            CTAAAAACTCTATTT 100 91
 JI729_13425 2616711 .. 2616729 -  -7.4  -4.99043   GCTTGATAAATAAAA             CCACCTTT CTG ACAGGTGG             TTTTGTGTACTAATT  85 134
 JI729_13420 2615544 .. 2615569 -  -9.1  -5.37171   AAGATTAAATAAAAA         TAAAAACCGTC ACAT GACGGCTCTTA          TTTTTGCAAACTACT 100 36
 JI729_13415 2614704 .. 2614716 -  -3.5  -2.92371   ATGTATCCAAGCATA                TTTTA AAT TAAAA                ACATTGGAGGATTAG  46 499
        recQ NONE
 JI729_13385 2609753 .. 2609791 - -13.5   -3.5361   CAATTATTCACACAA   TAAAAAGCAGATAATGA ATTCG TCATTATCTGCTTTCCA   ATTTTTAAAACTACC 100 44
 JI729_13375 2606806 .. 2606841 - -13.6  -3.27525   TCGTTTGAAATTGAA    CATTATTCAACAATCG GGCG CTATTGTTGAATAATG     TTTAGATTTTTAAAC 100 230
 JI729_13360 NONE
 JI729_13355 NONE
 JI729_13350 2602430 .. 2602455 - -10.5   -5.4593   TTAAAATAAGAAAAA         GGTAGCATGAA TTTT TTCTTGCTACC          GAAAAATATTTATTC 100 35
 JI729_13345 NONE
 JI729_13340 NONE
 JI729_13335 2600755 .. 2600771 -  -3.7  -2.67902   TAATATTATTATAAT              CTCTTTT CAA AAAAGTG              CTGACTATGACCTTT  44 2
 JI729_13330 NONE
 JI729_13325 NONE
 JI729_13320 2599174 .. 2599219 - -11.5  -4.29176   ATATGTAATGTAAAA CTGTAAATAGCTAGTAAAACA AAGT TATTTTACTAGCTATTTATTG ATTGCTTTTATGATA 100 16
 JI729_13315 NONE
 JI729_13310 NONE
 JI729_13305 2597243 .. 2597266 - -11.2  -5.55769   TTCCATAATAAAAAA          CGATTAGTTT AATT AAACTAATCG           GTAAGATTCAAAAAG 100 64
 JI729_13300 2596414 .. 2596432 -  -5.3  -3.02511   TCTATGTTGGCAAGA             GTACGGA TTTTC TCCATAC             TCTTTTCTTAGTTGT  53 57
 JI729_13295 2595126 .. 2595151 -  -9.9  -4.73682   TCTTACAACAGAAAA         GTGTCTATATC ATTT AATATAGACAC          TTTTTTCATGTATAA 100 52
 JI729_13290 2593237 .. 2593273 - -13.3  -5.22006   TTATCATAATAAAAA    GGGTAGTATATGAAT CTTATGT ATTCATACACTACCC    TGTTTTATTAATAGA 100 109
 JI729_13270 NONE
        clpP 2590224 .. 2590251 -  -9.9  -4.20491   AGATTAATAAAAATA        GGCTAGAGGGT TAGCAT ATCCTCTAGCC         TGTTTTTAACTTATT  91 36
 JI729_13255 NONE
 JI729_13250 2587117 .. 2587140 -  -6.2   -5.4833   GGATGCAATAAAAAA          CACACTTTGTA TTA TA-AAAGTGTG          TTTTTTATTCATTAT  86 37
 JI729_13240 NONE
 JI729_13235 NONE
 JI729_13230 2585018 .. 2585028 -  -5.4  -3.74868   TTCAAAAACAACTAA                 GGAT ATA ATCC                 ATACTATTAATAAAA  61 74
 JI729_13225 NONE
 JI729_13220 2584166 .. 2584205 - -19.8    -3.671   AAATAAATGCTTAAA  TAAACAAGAAACCATTTA GTAG TAAATGGTTTCTTGTTTA   TTAGTTATTTCATTT 100 39
 JI729_13205 2582092 .. 2582127 - -17.8  -5.55769   TTTCATAATAAAAAA    GTGGACAAAATGAGAC ATCT GTCTCGTTTTGTCCAC     TTTTGTTCACCTAAT 100 56
        acoA NONE
        acoB NONE
 JI729_13190 NONE
        lpdA 2577272 .. 2577312 - -12.2   -2.6933   TCTTCTATAAAAATT  CAAACCACTATTCTCT CTTTCATTT AGAGAATAGTGGTTTA  TCATATTTCTATTTA 100 38
 JI729_13165 2575153 .. 2575179 -  -8.2  -4.77896   TAATTAATTTAAAAA         TAAAAGCAGATT AAA AATCCACTTTTA         TTTTTTTCGCAAGAT  87 9
 JI729_13160 2574412 .. 2574433 - -10.2  -4.35044   GTATCTAAATAGAAA           GACCAGTC TTACAT GACTGGTC            TTTTTACATTCATAC  95 66
 JI729_13150 NONE
 JI729_13145 NONE
 JI729_13140 2571855 .. 2571866 -  -5.8  -4.55544   AATACATAACCAAAA                CCAC TTTT GTGG                 ATTACCATTTATAAA  73 130
 JI729_13135 2569787 .. 2569805 -  -6.1  -5.38054   GCCCACAAAGAAAAA             GTAGATT ACAAA AATCTAC             TTTATAACTTATATT  86 27
 JI729_13130 2569327 .. 2569346 - -12.2  -4.85782   CTTTTTAAAAAGAAA            CCGCTAAG TTTT CTTAGCGG             TTTTATTAACAATTT 100 114
 JI729_13125 NONE
 JI729_13120 2568402 .. 2568425 - -12.6   -5.4593   TTAAAATAATAAAAA          CGTTACTCAA TCCT TTGAGTAACG           TTTTCCCCTTAATAT 100 51
 JI729_13110 2567489 .. 2567518 - -10.2  -4.03413   ACGGGGTTATATAAA       TAGCACACCTGTA ATAAA TAC-GGTGTGCTA       TTTTACATTTATAAA  95 34
        kynU NONE
        kynB NONE
        kynA 2563893 .. 2563926 - -12.7  -5.27335   GTGCTCAAATAAAAA     TAAACCTGTCAG-CCA TAA TGAACTGACAGGTTTA     TTTTTATAATTTCGT 100 29
 JI729_13085 NONE
 JI729_13080 2561972 .. 2561986 -  -4.3   -5.1417   GTAGAAAACCAAAAA               CAGTT CAAAT AACTG               TTGAAAAATTTAAAT  76 293
        sleB NONE
        ypeB NONE
 JI729_13060 2558844 .. 2558865 - -10.2   -4.7173   TATTATATTTAAAAA           CCTCGTAC AATTAA GTACGAGG            CTAATTTCATTTATT 100 32
 JI729_13055 NONE
 JI729_13050 2557818 .. 2557828 -  -2.6  -3.00022   TTCATTTTATATACA                 TATA TTA TATA                 TTGTTAAAATAAAAA  42 82
 JI729_13045 2557514 .. 2557526 -  -2.7  -2.67792   AATAAAATGAACTTA                TCAAT TGA ATCGA                TTTTCCCACTCATAT  40 13
 JI729_13040 2556907 .. 2556938 - -17.6   -5.4659   CAATATAAATAAAAA      GATGAGGTTTTCTA CATG TAGAAAACCTCATC       TTTTTATATTTACAT 100 35
 JI729_13030 2555125 .. 2555136 -    -3  -3.40073   ACTTCCACCAACTAA                CTTA TCGT TAAG                 TTTGTAAATCCTAAC  48 10
 JI729_13025 2554719 .. 2554752 -  -9.7   -5.0065   CATTTACAAACAAAA     CCCCATCACTGTA TTCGTATG TATAGTGATGGGG      ACTTCTTATATTTTT 100 47
 JI729_13010 2550743 .. 2550768 -  -9.1  -5.38249   ATTAATTATAAAAAA         CACAGTTGG TTATTTTT CCAACTGTG          TTTTTTATTTTATCA 100 75
 JI729_13000 2548305 .. 2548319 -  -3.6  -3.74345   ACCTACATACTTAAA               TTCCTA CGC TAGAAA               TATTATCTTTGAAAA  54 103
 JI729_12995 2547576 .. 2547605 - -10.2  -5.42862   ATACTTCCAAAAAAA       TAACCCCGCTCTT CATTT AAGA-CGGGGTTA       CACTTATACAGAAAA 100 173
 JI729_12990 2545196 .. 2545222 - -10.3  -5.21506   ATAACAACATAAAAA        CCCACTCTTTAC TATT GTAA-GAGTGGG         TTTCATACTATTAAA 100 70
 JI729_12985 2543148 .. 2543177 -  -8.7  -5.52384   TTGCTATGAAAAAAA       CAGCTAATATCCT TAAA ATGACATTAGCTG        TTTTTCATAATGTAT 100 71
        pulA 2539791 .. 2539826 - -17.9  -4.23758   ATTTCATATTCAAAA    TAGAGAAAAGACACC TTGAAT GGTGTCTTTTCTCTA     TTTTAATTCCATATA 100 380
 JI729_12975 NONE
 JI729_12970 2531255 .. 2531272 -  -8.4  -4.66609   TATTCTATTTAAAAA             GGCGAG TTCTTG CTCGCC              TTTTCATTTTTTATA  85 36
 JI729_12965 2529717 .. 2529749 - -16.6  -3.35597   TTTATCGTTTAAATA      TAATAGCCGATTCT AAATA AGAATCGGCTATTA      ATATGTAAAATCCGC 100 49
 JI729_12950 NONE
 JI729_12945 2524208 .. 2524233 - -10.6  -5.24416   CAATTATAATAAAAA         GAACTTGTAG GATATT CTACAAGTTC          TTTTTCAAATATTAT 100 185
 JI729_12920 2519418 .. 2519428 -    -4  -4.32436   ACAGTATGAGTAAAA                 TTGT TTT ACAA                 AACTTCGTATTAATC  61 182
 JI729_12915 NONE
 JI729_12910 2518284 .. 2518304 -  -2.6  -2.78813   GGGCACTGTAACAAC            GTACATTT CATTT AACTGTAC            CGGTACAAAAATTAC  41 120
 JI729_12905 2517395 .. 2517439 -   -19  -4.81551   CATTTACACCAAAAA TAATAAAGATAGCCGCTTCT GAATA AGAACCGGCTATCTTTATTA TTCATAACTTAATAG 100 27
 JI729_12895 2516357 .. 2516382 -  -3.4   -4.0777   ATATAAATATAAGAA         CATTCCTT AGTATAATAG AAGGAATG          CTTTTTTCAATGTAC  55 83
 JI729_12890 2515028 .. 2515077 -  -9.5  -4.74787   ATAAATATAAACAAA GAGCCGACATCACAATTCTACATT ATT AATGCAGGTTTATAATGTCGGC-C TTCTATTTTTAAAGA 100 146
 JI729_12885 2514416 .. 2514436 -  -3.3  -3.23235   TATACACTAAGCGAA            TTTTAGCAT AAC ATGCCAAAT            CTATATTACTCTATT  47 130
 JI729_12880 2513532 .. 2513564 - -10.9  -4.02468   AAAAATATGTATAAA      TAAAAAGATTAGG GTTCACT CCTAATCTTTTTA      TATTTTGAGGTAGCA  95 151
 JI729_12865 2511332 .. 2511344 -  -3.5  -3.57731   TGAATTACTATATAA                TAAAA GAC TTTTA                GGGGGATAAATTGTG  52 95
 JI729_12860 NONE
 JI729_12855 NONE
 JI729_12850 2509563 .. 2509588 -  -7.6  -5.67283   AATCTAAATAAAAAA         CAATCCTTGC ATATTA GCTAGGATTG          TTTTTTATTAATGTT 100 43
 JI729_12840 2508370 .. 2508399 -  -2.2  -4.16307   CCCTTAATAAAAAGA       GATCCTGCCT TGTATGAATG AAACAGGATC        TTAAACTAATTAACT  52 56
 JI729_12835 NONE
 JI729_12830 NONE
        bstA NONE
 JI729_12820 2505399 .. 2505425 -  -6.6  -5.25799   AAAATAACATAAAAA         GGTAAAGCGTAT TTT AAATGCTTTACC         TTTCTTTTTTGTAAT  84 21
 JI729_12810 NONE
 JI729_12805 2503565 .. 2503588 -  -8.2   -5.5112   TTTATGAACAAAAAA          CGTACAAGCA GCAT CACTTGTACG           TTTTAATTTTTATTC  95 35
 JI729_12800 2502665 .. 2502686 -  -4.5  -3.47896   GAATGAATGAATGAA           TTCTCATCA AATA CAATGAGAA            GTTCTTGAAGATGTG  55 312
 JI729_12790 2500699 .. 2500719 -  -4.7  -6.09196   TTTAAAATAAAAAAA            TCCTCCTCA CCT TCAGGAAGA            TTTTTTATTTGCTAT  93 58
 JI729_12780 2497897 .. 2497925 -  -8.9  -5.51046   TAAATACAGAAAAAA        GAGCGAATTCTTT ATA AGAGGATTCGCTC        TTTTTATATTTTAAA 100 42
 JI729_12705 2484300 .. 2484340 -  -6.4  -3.34652   GTGGTAAATAAGATA  CGTAAAAAAATCCTCC AAAAACAAA AGAGGATTTTTTTATG  CTGTTAACTTCCGAA  61 21
 JI729_12695 2483000 .. 2483017 -  -8.3  -3.87792   AAAGTAAAAATAAGA             GCCGTCC TGTT GGGCGGC              ATTTTATTTTAAATA  79 133
 JI729_12675 2478896 .. 2478917 - -14.5  -5.06735   CATAAATTATAAAAA           GCGCAGGAT CATC ATCCTGCGC            TTTTCTATCGTAATT 100 30
 JI729_12665 2475675 .. 2475694 -  -6.4  -5.40474   ATCCCGTCAAAAAAA            GTCCGGTT TTAT AACTGGAC             TTTTTTTGACGATTT  86 79
 JI729_12655 2473484 .. 2473502 - -13.2  -4.44797   TTATTAAGAGGAAAA             CCCGTGAA TAA TTCACGGG             TTTTTTATTTAATTG 100 133
 JI729_12590 2459657 .. 2459690 -  -9.7  -5.30616   TTATTTAAACAAAAA     GTGCTAACAAGTTTG CAAA CGAACTTGCTAACAC      TTATACAAAATATAC 100 176
 JI729_12580 2458113 .. 2458127 -  -5.8  -3.42482   GTACTGAAGATAACA               TATGAA TGT TTCATA               AATGTAATAAAAAAG  60 228
 JI729_12575 2457343 .. 2457361 -  -8.9  -5.24129   TTTGGGCATAAAAAA             GAGCACA ATATA TGTGCTC             TTGGATAAGAAAGGT 100 198
 JI729_12570 2456487 .. 2456518 -  -9.5    -5.626   TATTTTAGAAAAAAA      GGTGACTCAGC AATTCTGTCA GCCGAGTCACC       CAGTACTATCGATCC 100 143
 JI729_12565 2453933 .. 2453966 - -18.5  -3.71848   TTTGTCTATTAAGAA     TAAGAAAAGCCACTT AGAT AAGTGGCTTTTCTTA      TTTTTAAATTATGGG 100 413
 JI729_12555 2452448 .. 2452459 -  -4.4  -2.82015   TTCATATGTATTATA                CATG ATAA CATG                 TGTTAAGCTGCACGA  47 185
 JI729_12550 2451103 .. 2451140 - -17.4  -3.66999   ACTTATGTATCGAAA   CAAATAAAAAAGGAGC GACTAT GCTCCTTTTTTATTTG    TTTTAATGCGTATTC 100 28
 JI729_12525 2446615 .. 2446652 - -15.9  -2.73735   AAATAGTCGTAACTA   TATACAAGCATAGAGGT TCTC ACCTTTATGCTTGTATA    TTCTTATCCAGCAAA 100 29
 JI729_12485 2436034 .. 2436089 -  -5.6  -4.01078   AAAATGGATGACAAA TAGTATCATACCTCCGAATTTTGTTA ATGA TAATAGAACAAGGAGGTGTGATACTA TGGCACAAGACGTTT  65 283
 JI729_12450 2430306 .. 2430344 - -19.2  -3.04589   AAGTACAAGCATATA   GTATTAAGTAGGACAAGA TCT TCGTGTCCTACTTAATAC   TCAGAAAAAACCTCT 100 154
 JI729_12425 2425857 .. 2425897 - -17.3  -3.64703   CTGTGTGTATGTAAA  GTAATTAAAAAGCTGAC ATAATTA GTCAGCTTTTTAATTAC  TATAATCTAGTATTT 100 25
 JI729_12265 2397391 .. 2397412 - -11.7  -4.56914   GGAGTGAAAGGAAAA           GAACCCTTT ATAT AAAGGGTTC            TTCTGGTGATTTAAT 100 44
 JI729_12260 2396332 .. 2396360 -  -7.7  -3.05384   CTTTTTTGTATCTAA        GTTATTTTTAATA AAT TTTTAAAAATAAC        TCGAATATTGTTGGT  68 122
 JI729_12255 2395645 .. 2395680 -  -6.9   -4.1523   TTTATTATAGATAAA    TAGGTGACTCAGCAA TTGTGC TAGTCGAGTCACCTA     GTATTATCGAACCAA  72 144
 JI729_12190 2387101 .. 2387140 - -15.3  -3.00215   AAAGGTTTATATATA  TTACAAATGACATCGTC AATTAA GACGATGTCATTTGTAG   TTTTAGGAGAAATTT 100 282
 JI729_12170 2384011 .. 2384048 -  -8.6  -2.97255   GAATATAAGATGATA   GGTCAAACAAACCTTG ATATGA CAACGTTTGTTTGACT    TTTTTTGATGAAATG  72 62
 JI729_12120 2374031 .. 2374069 -   -17  -5.16472   AAAAACCTTAAAAAA   GAGTTCGAAGTTGATAAA AAT TTCATCAGCTTCGAACTC   TTTTTAGTTTATAGA 100 59
 JI729_12075 2364311 .. 2364356 - -11.4  -4.42238   TTACTTGAATGAAAA GAAAACACCGAAAGTATATA TAAAAG CAGGTACTTTCGGTGTTTTC TTTTTTACTATCGTG 100 33
 JI729_12070 2363666 .. 2363689 -   -11  -5.38958   AGTTAGAAATAAAAA          CGGCAAGCTA GAAT TCGCTTGCCG           TTTTTTTTATAGTTT 100 32
 JI729_12060 NONE
 JI729_12055 2361478 .. 2361501 - -11.8  -4.19276   TCAAAATCCCCAAAA          GAGCACTTGC GGAA ACAAGTGCTC           TTTTATTTTTTTGTT 100 117
 JI729_12010 2353119 .. 2353164 - -11.4  -5.01553   AATTGATAAATAAAA TAAAGAAGGAAGCTGAACCTA AAATA TAGGAACAGCTTCCTTCTT-A CAATTGTTCAAGTGA 100 23
 JI729_12000 2351972 .. 2352014 - -10.9  -4.41302   CAGCAAATTAATAAA TGCTGTTGTTTAACCA-AAG TTTC CTTGTAGTTAAACAACAGCG TTCTTAAATATTGAT 100 29
 JI729_11965 2346417 .. 2346445 -   -12  -3.71389   TAAACAAATAAGTAA        TAAAAAAGGCAT GTTTT ATGCCTTTTTTA        TTTTATTAATATCTC  95 62
 JI729_11915 NONE
 JI729_11910 2335224 .. 2335254 - -15.8  -4.74103   GTGTTAATGGAAAAA       GTTCAATTTCTTAT ATG ATAAGAAATTGAAC       TTTTTATTTATAATA 100 41
 JI729_11905 2334029 .. 2334055 - -10.2  -4.96646   TGATAGAATTAAAAA         CCGACTTGCA TCTCAAG CGCAAGTCGG         TTTTTATATATAAGA 100 48
 JI729_11895 2333559 .. 2333590 - -15.4  -4.78839   AAGGTGAGAAGAAAA      TAAAAAAAGAGGGC TAAT GCCCTCTTTTCTTA       TTAATTTGGTAATTA 100 38
 JI729_11890 2332185 .. 2332198 -  -2.3  -3.71848   GTTTCTGAGGAATAA               GAGGG TGAG CCCTA                ATTAAACGAAACTGA  49 108
 JI729_11875 2329935 .. 2329954 -  -8.6  -5.03994   GTTCATATATAAAAA            GCTGACTA TACT CAGTCAGC             TTTTTATATATTACA 100 86
 JI729_11830 2319898 .. 2319923 - -13.5  -4.33004   ATTTAAGCAAAATAA         TAAATCGCCTT TAAA AAGGCGATTTA          TATTTGTTATATTTT 100 78
 JI729_11790 2310247 .. 2310276 - -15.2  -4.16943   TTCTATATGGTAAAA       GAGGAAGGTTCA TTAAAG TGAACCTTCCTC        TTTATTTTTATTTTC 100 8
 JI729_11760 2304790 .. 2304803 -  -6.7  -3.57119   TATATAGGTCTTAAA               TCGCA GCCA TGCGA                GGGGGATATACCATT  64 316
 JI729_11665 2288150 .. 2288186 -  -7.5  -3.68351   CCTTGATCACGCAAA    TGATCTGTAAACCAA TTCATTT TTGATATACAGATCA    TTTGTATAATAATTT  69 67
 JI729_11565 2244086 .. 2244134 - -13.6  -2.51888   TTTGAAACCTAATAG TGTATATAAAAAGGTTAGAGAA GTTAA TTCTCTAACCTTTTTATATTAA TGTCTGAAATTTAAA 100 123
 JI729_11545 2240200 .. 2240230 - -14.3  -5.45726   TACAGGTGAAAAAAA       CAAAAGAAAATGC ATAGA GCATTTTCTTTTG       TTTTTTTATTTAATA 100 31
 JI729_11515 2235465 .. 2235492 - -12.9  -3.64488   AAGGCTCTTAAAATA        GAAAAGGATGG TGCTTT CCATCCTTTTC         CTTATGTATTTTGAG 100 105
 JI729_11495 2230733 .. 2230743 -  -6.8  -3.21416   TAGCTTTATTAGTAA                 TGCC AGT GGCA                 CTATCAGTTACACCG  61 377
 JI729_11480 2228476 .. 2228501 -  -9.7  -5.27476   CGGAACAAAATAAAA         GAGCGGCTAGC AAAA GCTAACTGCTC          AATACAAGGAGATAC 100 101
 JI729_11460 2223756 .. 2223789 -  -8.9  -5.18297   TAAGAACAAATAAAA     GGGAGTCAGAACTTA GGGA CAAGTGCTGATTCCC      GATTTGTTTACGGTT 100 188
 JI729_11405 2212373 .. 2212418 - -14.3  -4.35742   AGTGAACTACGAAAA TAAAAGTAAGAGCCCGCATTC AAAA AAATGGGGGCTTTTACTTTTA TTTTGCTTGAATAGT 100 23
 JI729_11380 2207692 .. 2207713 -  -7.3  -5.69068   TAAAAATATAAAAAA           GCGCATTTC TTCA GAAATGCGT            TTTTTATTATTTTTC  95 32
 JI729_11360 2203913 .. 2203938 - -12.1  -5.58074   CAATCAGCAAAAAAA         GATGAATTCTT TTAA AAGAATTCATC          CATAAAATAAACTAT 100 355
 JI729_11345 2199504 .. 2199521 -  -9.9  -5.80817   TTGAATATAAAAAAA             GACACTC AATT GAGTGTC              AATATAGTATTGCTC 100 287
 JI729_11340 2198390 .. 2198405 -  -2.6  -3.05816   TTATTTCTGATCCAA              CATCAA GTGC TTAATG               AAATGGTATGAAAGA  43 186
 JI729_11335 2197872 .. 2197896 - -10.1  -5.81412   TTTATGTAAAAAAAA          GAGAGCTCTTT TAG AAAGAGCTCTT          AATCAAATTATTATC 100 36
 JI729_11330 2197336 .. 2197364 - -11.9  -4.14392   TGTGAATTTTTAAAA        TTAGAGGTTTCTT TTA ATGAAACCTCTAA        AAAGACAACTAAAGT 100 40
 JI729_11325 2196241 .. 2196258 -    -7  -4.96773   TTAATTAAAAATAAA             GCACAC ATATAA GTGTGC              TTTTATGAACGCTTT  82 259
 JI729_11295 2188522 .. 2188569 -    -5  -4.07687   ACTTTGTTTTGAAAA GAGATTATTCTACTAGATCGTT GTGA AACGGTTTCATAGGATAATCTC TTTTTTTTAGTTTTG  64 65
 JI729_11285 2187092 .. 2187102 -  -5.4  -4.44355   GAACTGGAAAAAGAA                 GCAA CCG TTGC                 GGAAATTAAGGAAGT  70 399
 JI729_11275 2185250 .. 2185288 - -13.4  -2.65789   AGTATACTAATTAAT   GAAAGAGAGTAATTGCTT ATT AGGCAATTACTCTTTTTC   TATGTACATCTTAAT 100 44
 JI729_11255 2182186 .. 2182211 -    -7  -4.84527   GTTATATATTAAAAA         GGTTGTTAACC TTGCT GGT-AACAACC         TTTTTATTGTTTGAA  80 41
 JI729_11250 2181906 .. 2181954 - -13.1  -4.08706   TGTTGAGGACATAAA TTTATAATAAAAA-AACCTCTT AATTAA AAGAGGTTTTTTTTATTATAAA TTAACCTAATTTAGG 100 26
 JI729_11240 2180461 .. 2180500 -  -5.9  -4.32579   ATACTGTAGAATAAA  TAAAAACTGTCTCTTCA GCAAAA TGGAGGAACAGTTTTTA   TTTATTTTATTTGAA  70 27
 JI729_11215 2176704 .. 2176725 - -13.1  -4.29928   AATGAATAGTTAAAA           GCATGACAG TATA CTGTCATGC            TTTTTCATTAGAATT 100 20
 JI729_11190 2173123 .. 2173143 - -11.2  -5.08824   TGCCTAGTTAAAAAA            GCCAAGGA TATTT TCCTTGGC            TTTTTTCAATGTAGT 100 44
 JI729_11180 2170079 .. 2170124 - -19.5  -4.64048   TAGTATATAAATAAA TTATAAAAGAGCATGTTTGAA AAAA TTCAAACATGCTCTTTTATTA AAGCAAATCAGTTTA 100 38
 JI729_11135 NONE
 JI729_11130 2162772 .. 2162797 -  -9.2  -4.89393   TAAATTGCACAAAAA         GAGTATTGAA ATTTAA TTCAATACTC          TTTTAAATATTAAGT 100 28
 JI729_11120 2160951 .. 2160967 -  -3.7  -3.14564   TCAGTGTGGGAGGAA              CAAAAGT TTC ACTTTAG              CAACTTTAATGATGA  47 31
 JI729_11115 2159097 .. 2159127 - -14.2  -5.98675   TACAAAAATAAAAAA       GATAGCTGAAGACA AAT TGTTTTCAGCTATC       TTTTTTCGCTTAAAG 100 35
 JI729_11075 2149846 .. 2149867 -  -5.2   -5.8096   TAGAAAAAATAAAAA           CCACTTCA AGTAAA TGAAATGG            TCTCTGGAGAAACAA  91 408
 JI729_11070 2148407 .. 2148434 -  -5.7  -5.15634   GAGGGGATGAAAAAA        GGAACG-CTCAT CATGT ATGAGTCATTCC        TTTTTTCATAGATTA  79 38
 JI729_11065 2146670 .. 2146681 -    -3  -5.38249   ATGAATTAGAAAAAA                TGTT TGAA AACA                 TGGCAAATCAATATA  74 365
 JI729_11050 2145100 .. 2145133 - -16.3  -5.27335   TTGCTTAAATAAAAA     CAAGAAACCAGCCTAT AAA AT-GGCTGGTTTCTTG     TTTTTATTTAACAGC 100 29
 JI729_10995 2127714 .. 2127739 - -17.7  -4.53303   TATTTTTATATAAAA         TAGCCCCTGCT GTTG AGCAGGGGCTA          TTTTGTGGTGTTTTA 100 38
 JI729_10985 2126834 .. 2126870 -  -9.6  -2.79574   CATATGTATGAATCA    TAAAACGTCGTCTC TTCATATTG GAGGCGACGTTTTA    TTTTATAAAATATCT  76 39
 JI729_10970 2124776 .. 2124796 -  -9.7  -4.45485   AGTAGACGTAGAAAA            GACCGCC TATTACG GGCGGTC            GATTTTTATTTAATA 100 50
 JI729_10950 2121739 .. 2121758 -  -5.7  -5.24129   TTTCTCCATAAAAAA            GAACGCT TTACTT AGCGTCC             TCCACAACGAATAAA  81 13
 JI729_10945 2120978 .. 2121004 - -12.4  -4.44797   GGATGAATACGAAAA         GAAAACCGCC TGTGAAG GGCGGTTTTC         TTTGTTTATTTTGCT 100 31
 JI729_10940 2119324 .. 2119344 - -13.3  -4.47551   ATTGAACGTAGAAAA            GACCGCCTA TTA CAGGCGGTC            GAATTTTTTTTATTT 100 35
 JI729_10840 2098032 .. 2098054 -  -9.9   -5.0925   GTGTAAAACGAAAAA           GACTACGTC GTCAA GACGCAGTC           CTTACAAGTTTATTT 100 27
 JI729_10765 2086865 .. 2086884 -  -7.9  -6.09196   GGTAAAATAAAAAAA            GCCTTTC AAGCGA GAAAGGC             TGAATAGTCATCCGG 100 33
 JI729_10755 2085225 .. 2085243 -  -3.8  -3.54489   GTAAGCCTAAACTAA             TCGACGTG TCA CATGTCAA             AACGAAAAGCACCGA  52 439
 JI729_10740 2083314 .. 2083327 -  -5.3  -2.64735   ACTCCAGGTACATGA               CGAAT TGTT ATTCG                AGTGTCCGAGAGATA  51 421
 JI729_10695 NONE
 JI729_10690 2075466 .. 2075477 -  -5.8   -2.9244   ATTAAAATTATTATA                CGTG AATT CACG                 TAGTGACGGTCGGAG  55 73
 JI729_10670 2071388 .. 2071414 -  -4.3  -5.95539   GCGGAAATAAAAAAA         TGACCGATCCT TTTAT AGGAGCGGCCG         TACAAATATCATGTG  89 332
 JI729_10635 2066089 .. 2066100 -  -4.4  -3.65351   GTATTTCTATCGAAA                CGAT GTTC ATCG                 ATGAAGGGTTCGGTT  57 275
 JI729_10610 2059815 .. 2059852 - -23.1  -5.34309   AGCATTAAATAAAAA   GGCTATATAGTAGCTGT AATT ACAGCTACTATATAGCC    TCGATTTTATACCGC 100 138
 JI729_10605 2059041 .. 2059074 - -15.5  -3.78312   AAATTAGTTATTAAA     TGAAAACCACCACTA TTAA TAGTGGTGGTTATCA      TCTTGTTAATTACTT 100 31
 JI729_10560 2048715 .. 2048742 -   -10  -5.07971   GAAAACAATTAAAAA        GTCGAATTTCTT ATTT AAGGAATTCGAC         TTTGTTATGTTGAAA 100 93
 JI729_10550 2045205 .. 2045227 - -12.1  -4.10453   CAAATGTTTTTAAAA           GAAAGGAGG ATTAA CCTCCTTTC           TTTTTTAGTGGGTGT 100 46
       gerPF 2042066 .. 2042088 - -13.5  -5.31072   ATAATACAAGAAAAA           GCAGCTAGC TTCGT GCTAGCTGC           TGAGCCCCAGGGAAA 100 144
 JI729_10485 2036271 .. 2036293 -  -9.2  -5.60993   GGTTGCATAAAAAAA           GAGCATACAT AAA AAGTATGCTC           CAAAGAAAGATAGGT 100 218
 JI729_10460 2033471 .. 2033516 - -21.5  -4.38129   AGATAATTATGAAAA CAGATGAAAGCCCTCTGAAAA ATAT TTTCCAGAGGGCTTTCATCTT AGTATGCTTCTAAAA 100 24
 JI729_10455 2032276 .. 2032297 -  -7.4  -5.61596   ACGTTCATAAAAAAA           GAACCTAT GTCATA ATAGGTTC            TTTTTTCATTGGCTC  90 8
 JI729_10425 2029036 .. 2029048 -  -3.5   -3.2115   TAAAGCAGGTATGAA                TAAAT TAG ATTTA                GGAAAGTTAAAGTCA  47 219
 JI729_10370 2018016 .. 2018045 - -15.2  -4.87389   CATTTCAAAAATAAA       CAGTCTACACCA AATGAA TGGTGTAGACTG        TTTTAATTTGTGAGT 100 28
 JI729_10360 2016182 .. 2016212 -  -4.8  -5.14965   ACTTGCACTAAAAAA       CGAGTAGGAAAT GTTTACG ATTCCATACTCG       TTTTTTACGCTTCTA  75 66
        racA 2012310 .. 2012334 - -14.5  -5.14563   CTCTTCATTAAAAAA          GACCCTTATTA TTT TAATAAGGGTC          TAAAAATTATAATCC 100 32
 JI729_10260 NONE
 JI729_10255 1991406 .. 1991440 - -14.5  -3.50045   AGTTAGACAGTATAA     GAAGATGATCCCTGT ATTTA ATAGGGATCATCTTC     TTTATTTTCTACTAA 100 78
 JI729_10160 1974657 .. 1974677 - -14.1  -4.57569   TTAGTGGGTTAAAAA            TAAGGGTGC ATA GCACCCTTA            TTTTTTTTTGTATTA 100 38
 JI729_10150 1972434 .. 1972460 - -12.5   -5.5353   CAGAGTAATAAAAAA         GCTACTTGAAA ATATA TTTCAAGTAGC         TTTTTTATGTAAATA 100 321
 JI729_10125 1968960 .. 1969017 - -16.9  -2.86449   ATCGCATCACAATTA CATAAGTAATAAAAAAGGATTCAGCTTA TAG TAAGCTGAATCCTTTTTTATTA-TGCTG TAGGTAAGACATAAA 100 18
 JI729_10095 1961953 .. 1961975 -   -12  -4.63586   ATATGACATAGAAAA           GGTAGGTGTG ATT CGCACCTACC           TTTATTTTTTACCAT 100 49
 JI729_10060 1956471 .. 1956488 -  -4.1  -3.14931   TTTATTCCGTATTAA             CGGGGAGT AAG AC-CCCCA             CTGATTAAAGTTTCA  49 54
 JI729_10055 1955703 .. 1955738 - -12.8  -3.30821   AATAATAGAAGTCAA    TAAAGAAGGGATAGCC ACTA AGCTATTCCTTCTTTA     CGTTAATTGCTGTTA 100 198
 JI729_10010 NONE
 JI729_10005 1947699 .. 1947725 -    -8  -4.84642   TTGAAATGAAGAAAA         GGGTGCTTCT ATAAATG AGAGGCACCC         TTTCTAAATTTCTGG  85 29
 JI729_09985 1942412 .. 1942435 -   -11   -5.1485   GAATTAATATAAAAA          GTCGTGGCAT TTAT AAGCCACGAC           TTTTTAATTTGCTTA 100 101
 JI729_09925 1925266 .. 1925293 -  -6.4  -6.14618   TAGAAAATAAAAAAA        GGGATTCCTT-CT GAG AGTAAGGAATCCT        CCTTTTTGTTGCTAC  95 118
 JI729_09895 1919836 .. 1919870 -   -13  -5.21709   CTGGATATTAAAAAA     GTGCCAAAACCCTTGT GGT ATAAGGTTTTTGGCAC     TTTTGTGTTTTTTAT 100 61
 JI729_09880 1916929 .. 1916984 - -31.2  -3.73294   TAAAAATATTTTAAA TCTATAGCAAATAAAAAAGGTGATTC ATAA GAATCACCTTTTTTATTTGCTATAGA GGGGTACATGTAAAT 100 19
 JI729_09705 1885579 .. 1885594 -  -6.1  -6.23317   AGAAAAATAAAAAAA              GAGGG CTGAAT CCCTC               TTTTTCTTTTGATAT  95 46
 JI729_09695 1883731 .. 1883748 -  -9.9  -6.04324   TGAAAAAATAAAAAA             TCGCCTT AGTA AAGGCGA              TTCATAGTTTATTTA 100 90
 JI729_09670 1878427 .. 1878451 -  -9.4  -4.38927   CTTTTACACAACAAA          GCAGCTAGTT AACAA AACTAACTGC          TTGTTGTACAAAAGA 100 353
 JI729_09665 1877011 .. 1877046 - -12.6  -4.58773   TTTATTAAAGGAAAA    TAGGTGACTCAGCAAG TGTG CCAGCCGAGTCACCCA     GTACTATCGATCCAA 100 145
 JI729_09660 1875945 .. 1875964 - -10.8  -3.30038   GATATGTAAATGTAA            GAGCACTT CGGG AAGTGCTC             TGTAAAGACTATCCA  87 164
 JI729_09655 1874541 .. 1874570 -  -9.3  -4.84539   CAAGCAAAGATAAAA       TAAGACCGCTCCT TTAT AGGAACGGCCGTA        CAAATATCATGTGCT 100 408
 JI729_09605 1869745 .. 1869772 - -11.6  -3.66378   TACACTCCATTCAAA        TAAAATAAGAAC GTTC GTTCTTATTTTA         TAATGGAAAAGTAAA  93 429
 JI729_09600 NONE
 JI729_09595 1867860 .. 1867892 - -10.7  -4.72846   CTAGATACTTAAAAA      TGCCAAATCCTTTGT GAT ATAAGGGATTTGGCA      TTTTTGATGTTTTTA 100 182
 JI729_09585 1866231 .. 1866247 -  -6.6   -5.8187   TATTCAATAAAAAAA              GATGCT GAAAT AGCATC              TGAATGTGAAGAAAT  95 45
 JI729_09575 1863065 .. 1863096 - -16.2  -5.92399   TAACAAAATAAAAAA      TAAAGCAGATTCTA AATA TAGAATCTGCTTTA       TTATGAAATACTTGT 100 47
 JI729_09560 1861250 .. 1861268 -  -7.5  -5.46657   TACGTTAATAAAAAA             GAAGCTT AGTAA AAGCTTC             TTTTTTATTACTATT  90 36
         ric 1860330 .. 1860361 - -10.2  -4.98531   TCGCGAAACGAAAAA      GCAGGCCATAAGTA TTTA CACTCATGTCCTGC       ACTTGATTTATGCTT 100 33
        nirB NONE
        nirD 1857393 .. 1857412 -  -9.3  -4.18494   TATTTTTATTTAAAA            GGAAGCC AGGGGA GGCTTCC             TTTTGTAAATTACAT  88 35
 JI729_09540 NONE
 JI729_09535 NONE
 JI729_09530 1854704 .. 1854733 -  -6.5  -5.24416   GAACTACAATAAAAA       GAACAAACGTCCC CTAA AAAACGTTTGTCC        AAAGGTAATTACTAT  82 58
 JI729_09480 1845921 .. 1845947 - -12.5  -5.22039   TTTAAATTGAAAAAA         GATTAGCATCT AAATA AGATGCTAATC         AATGCTACAAACAGA 100 20
 JI729_09455 NONE
 JI729_09450 1837838 .. 1837855 - -11.3   -4.5787   TGAGCAAAAAAAATA             GCGTAGG AAAC CCTACGC              GTAAAGTTTGGAACA 100 134
 JI729_09445 NONE
 JI729_09440 NONE
 JI729_09435 1833105 .. 1833136 - -16.1  -5.15634   CACTTTATTAAAAAA      CGTCTCAAAGAAC AATGTA GTTCTTTGAGACG       TTTTCTTTAAACTCA 100 52
 JI729_09425 1832123 .. 1832149 -   -16  -5.63645   CTAAAATAGAAAAAA         GGCAGAAAACGA AGC TCGTCTTCTGCC         TTTTTGTAATATTAT 100 40
 JI729_09420 1831052 .. 1831088 - -13.3  -5.51402   ATATATTCAAAAAAA    GAAGAGATATACAATAA CTA CTGTTGTATATCTCTTC    TTTTACTGTTAGTTA 100 34
 JI729_09415 1830528 .. 1830549 -  -8.7  -4.96646   TGAGATAAGTAAAAA           GCTCAATGC TTTA GCTTTGAGC            TTTTTTATTAAAACA  93 53
 JI729_09400 1828084 .. 1828095 -    -3  -2.77701   ATTTCAGGAAGAGGA                CTAA ACAG TTAG                 TATTACTTTCCCTGT  43 14
 JI729_09395 1827378 .. 1827403 - -16.3  -4.13945   ATTGCTATGTGAAAA         TCCCCCTCAAA TATA TTTGAGGGGGA          TTAAATTTTTGAAGT 100 26
 JI729_09360 1820920 .. 1820942 -   -15  -3.41693   TGTATCACGAATGAA           CACACCAAGT ATA ACTTGGTGTG           TTTTTTTAAAACGCT 100 31
 JI729_09335 1817792 .. 1817825 -  -8.2  -3.61103   GAATTTGAGGGTAAA     CGCCCCAATTGC TGGAGTAGAT GCAACTGGGGCA      TTTATCTGTCTAAAT  74 184
 JI729_09185 1789127 .. 1789147 -  -6.9  -3.69092   AACATTAAGCTGAAA            TAGGAGG GATATAA CCTCCTA            TTTTTTTAAAGGAGT  67 23
 JI729_09170 1785774 .. 1785808 - -20.3  -3.61089   GGTGAATAACTAGAA     GAAGGCTGTCCAAAA AGTTA TTTTGGACAGCCTTC     TTTTTTATTTTGTTG 100 73
 JI729_09155 NONE
 JI729_09150 1781802 .. 1781820 -  -8.2   -5.5353   TATATTAAGAAAAAA             CTGAATCA TTT CGATTCAG             TTTTTTTATTTTTTT  95 304
 JI729_09140 1779986 .. 1780003 -  -5.6  -3.46081   TAGCTAATTAATGAA             TGAGTG GAAAAT CACTCA              AATAAAGGAATGCGA  60 19
 JI729_09105 1773861 .. 1773890 - -15.2   -4.4768   CATGAATAGAATAAA       CAAAGAGGACAG GAATCT CTGTCCTCTTTG        TTTTAGTGCTTAAAG 100 35
 JI729_09080 NONE
 JI729_09075 1769623 .. 1769645 -  -2.6  -4.68601   ACTCAAAAGAAGAAA           CCCTTATAGC TTG GCAAGAAGGA           TGGAAATATGTTTTT  62 238
 JI729_09050 1765339 .. 1765369 -  -4.1  -3.79162   GCTATACAAAAGGAA       TAACCCCCTAC TTTTAGATT ATAGAGGGTTA       TTTTAAATTAAGGTT  55 33
 JI729_09045 NONE
 JI729_09040 1763357 .. 1763376 - -13.6  -5.58454   TGCATATTAAAAAAA            CCATCCCG AAGT CGGGATGG             TTAAAAGATGATATA 100 26
 JI729_09015 1760236 .. 1760271 - -17.8   -3.0579   AAATGGTTTTAAAAT    GAAAAGCGGACACCTA AAAA TAGGTGTCCGCTTTTA     TAGTTTTTTCATCCA 100 63
        exsB 1751535 .. 1751549 -  -9.2  -5.25805   AATAAATGTAAAAAA               GGCCGC AAA ACGGCC               TTTTTTTGGTGGTAT 100 46
        namA 1745442 .. 1745496 - -16.4  -3.66643   CAAATGAAATTACAA CGATA-GAATAAATAAAACCGAGAAG AATGA CTTCTCGGTTTTATTTATTCGTAT-G AATTTTTCCTGGTGC 100 11
 JI729_08920 1743233 .. 1743259 - -15.3   -5.1634   ATAAATACATAAAAA         GGCAGCTGAAT AACAA ATTCAGCTGCC         TAGAAAATATAATGG 100 42
 JI729_08915 1742659 .. 1742674 -    -9  -5.21236   AATGTATAATAAAAA              GCCTGT TTTC ACAGGC               TTGTATTTTCGTCTA 100 18
 JI729_08905 1740501 .. 1740526 -   -12  -4.87037   AATACATATGAAAAA         GAAGAGCTGT AAAAAA ACAGCTCTTC          TTTTTATGCATTATG 100 36
 JI729_08890 1737989 .. 1738008 -  -5.8  -4.67038   TGCTCAAAATGAAAA            GCGGATAAT CTT ATT-TCCGC            TTTTAACGAGAAAAT  73 28
 JI729_08885 1736870 .. 1736895 - -14.9  -5.16071   AAGTAGTAAGAAAAA         GAGATGCATCA CATG TGATGCATCTC          TTTTTAGAATTATAA 100 35
 JI729_08865 1733385 .. 1733422 - -17.4  -3.35073   ATGATTGTGAATGAA   CATAAAAAAGCATCCA ATAACA TGGATGCTTTTTTATG    TTTTTTGAAGTTGTT 100 21
 JI729_08835 NONE
 JI729_08830 1727363 .. 1727421 - -16.4  -5.96894   ATGGAAAGAAAAAAA TTCTAAATAAAAAGCACTGTTTTAGCTA ATG TAGCTAAAACAGTGCTTTTCTCTTTGAT TGAACAGTTGCAGCA 100 1
        nadE 1721417 .. 1721439 -  -6.4  -5.47431   TTAACATATAAAAAA           GAAGCTAA ATGAAGA TTAGCTTC           TTTTTTATGTTTCAT  86 41
 JI729_08775 1718123 .. 1718159 - -14.7  -3.63589   TAAAAGATTTGGAAA    TGGCAAAAAAGCACGTA TTG TACGTGCTTTTTTACAA    TGGTTTTTAAGTTTA 100 41
 JI729_08770 1717033 .. 1717075 - -10.3  -3.34534   GAGATTATATAGGAA GTAAATAAGTCTAGTAATAT AAGA AT-TTACTAGGCTTATTTAC TATTAAGTTGTTAAA  83 72
 JI729_08755 1714609 .. 1714641 -    -5  -3.07233   TCATAATTTGTAAGA      GAATTGCATGAT GTTTTGAGA AACATGCAATTC      TCTTTCGTTCATTAA  54 37
 JI729_08640 1689010 .. 1689043 -  -9.6  -5.00339   AGCAATAATGAAAAA     TAGGACTCCACGCA ATATAA TGCTAGGAGTCCTA      TTTTATTTATAAACT 100 32
 JI729_08600 1680815 .. 1680840 - -11.9  -4.60797   TTTGTATAGAGAAAA         GGCTTTCCAAG GAAA CTTGGGAAGCC          TTTTTATAGTTGAAT 100 62
 JI729_08590 1678591 .. 1678617 - -12.4   -4.8384   TAAATAATTTAAAAA         GGTGAACAGG AATATAA CCTGTTCACC         TTTTTTTATACGTAA 100 31
 JI729_08575 1675481 .. 1675515 -  -5.8  -2.74525   CCAAATTATATAGTA     TCATGGCTTTTATTGT AAA ACAATAGAAGCTATGC     ATTCATTTTTTCCAA  55 28
 JI729_08570 NONE
 JI729_08565 1674663 .. 1674685 - -12.1  -4.87626   GGTCAATAGTAAAAA           GCTCCGTTT GTGAT AAACGGAGC           TTTTTGTATAAGTGA 100 41
 JI729_08485 1657539 .. 1657566 -  -7.1  -5.58522   TATACAAAATAAAAA        TCCCTCTTTTA TATTCG TTAAAGAGGGA         TTTTTATTTTGAAAA  90 65
 JI729_08445 1648941 .. 1648996 - -25.5  -2.88638   AAAAGTCATAGGAGA TAATGAAAATAAAAAAGCAATCCAA AATAAA TTGGATTGCTTTTTTATTTTCATTA AAGAACCGGAGCCAT 100 23
 JI729_08410 1641878 .. 1641927 - -13.2  -4.58663   AGTACGTCGTAAAAA GTAAGACGTAAGAAAGAGCCTGC AAACA GTAGGCTCTTTCTTACGT-TTAT TTCAATTCAACTTGC 100 22
 JI729_08380 1635174 .. 1635190 - -12.3  -5.55769   TTCCATAATAAAAAA              CGTCCCA AAA TGGGACG              TTTTTTATTATGCAT 100 33
 JI729_08365 1630502 .. 1630524 - -10.6  -3.48696   CCAGAATAATAGGAA           GCAGTTATCC TAT GGATAGCTGC           TTATTCATTTTTGTT  83 48
 JI729_08355 NONE
 JI729_08345 1625987 .. 1626030 -    -9  -3.43261   AATTAGAAAAGGCAA TAAACAGAGCGAGAATTTCT ATAT AGGAAATCCAGCTCTGTTTA TGTTTTATTGAAATT  76 55
 JI729_08300 NONE
 JI729_08295 1617241 .. 1617269 -  -6.2  -4.56961   AATATGTAGATAAAA        CGAGAAATAA AAAAGTTGA TTATTTCTCG        TTTTATTCTTTAAAA  76 107
 JI729_08260 1606939 .. 1606968 - -10.1  -3.45817   TTCGTATAATAAAAG       GGGTACTCCAA GTTTAATT TTGGAGCACCC        TTTTTTTATTATCCG  81 185
 JI729_08250 1604148 .. 1604176 - -13.3  -4.66609   CATTTCATCCAAAAA        GGGTATTCCAAAT TAA AATTGGAATACCC        TTTTTCATTATCCTA 100 33
 JI729_08230 1600714 .. 1600734 - -11.3  -5.61913   AATAAATACAAAAAA            CCTTACTTT TTA AAAGTAAGG            TTTTTTACACATGAA 100 46
 JI729_08190 1591960 .. 1592001 - -17.1  -3.24166   AGTTAACTAAGTGAA TAAA-AAAAGGATGAAGCAA TCA TTGCTTCATCCTTTTCTTTA AAATTTAAGACATAG 100 23
 JI729_08170 1587440 .. 1587455 -  -2.6  -5.64006   AGTTAACCAAAAAAA              TA-TCGC AAT GCGAATA              ATTACATACATAGTA  76 235
 JI729_08130 1578708 .. 1578722 -  -2.9  -3.41767   AGATTTGAAAATATA               TGTTT TTTAT AAACA               AGATCCTCCGCTCAC  46 17
        msrA 1578054 .. 1578080 -  -7.3  -5.65496   TATCAAAAATAAAAA         CGCATCGTATT AAAAA AGCACGATGCG         TTTTTATTATTTTTT  90 32
 JI729_08095 1573538 .. 1573578 - -15.7  -4.08706   TTGGCATTATATAAA  TAGAAAGGTAGCGTATCAT ACA AAGATACGCTACCTTTTTA  TTTTGCTCTTTTTTG 100 23
 JI729_08055 1564021 .. 1564047 -  -9.5  -5.05577   AAATTAAATGAAAAA         GAGGTTCTAGT TACTG ACTAGAGCCTC         TTTTTATACACTTAA 100 37
 JI729_08045 1560663 .. 1560692 - -11.6  -3.61774   TAGAAGATGCGTAAA       GAAAAACAGGCT GCTATT AGCCTGTTTTCC        TTACGTTAGTATGAA  93 31
 JI729_08025 1556493 .. 1556529 - -17.6  -5.02074   GCAGGTTTCAAAAAA    GAAGACTAAGCCCTAA AGAAA TTAGGACTTAGTCTTC    ATTAAATACAAATGT 100 17
 JI729_08015 1554408 .. 1554443 - -11.5  -3.50929   GAAAGTAGAGGAGAA    GTAAGAAAAGCTTGGA GAGAT TCCAAGCTTTT-TTAC    GTATGTGTAATTGTT  93 22
 JI729_07995 1549308 .. 1549342 -   -13  -4.65895   CCTTTCAGTCAAAAA     CACCTTGTCACAGTAT AGG AAAATGTGACAAGGTG     TTTTTTAATATGTCA 100 128
 JI729_07990 1548356 .. 1548370 -  -4.9  -4.13767   TCGTTCAGGTGAAAA               GCACG ACGGA CGCGC               AGCTGATTATGACGA  63 421
 JI729_07980 1546759 .. 1546788 - -10.8  -5.48063   ATTTAATATAAAAAA       GCTATGCCTTCA AATTTA TGAGGGCATAGC        TTTTTTGTTGTAATA 100 88
        pyrH 1535459 .. 1535479 - -12.6  -3.79747   TGATGGATTAGGAAA            GGGTGCCT ACAAA AGGCACCC            TTTTTGGTGGGAAAT 100 43
 JI729_07935 1533140 .. 1533160 -  -6.8  -4.19238   TGTTTAATGTGAAAA            GGTGTGGC TTAAT GCCATACC            TTTTTTGTTTGAAAT  72 41
 JI729_07905 NONE
 JI729_07900 NONE
 JI729_07895 NONE
        exsE 1524772 .. 1524791 - -13.6  -4.95758   ATTATATGAGAAAAA            CCTTCCGC AATT GCGGAAGG             TTTTTTATTTTTCGA 100 30
 JI729_07875 1521280 .. 1521326 - -11.8  -5.00616   TTGGTGCCGAAAAAA TAAAAGATAGCCATTAACGGAT ATT ACCCGTACATGGCTATTTTTTA TTACATATATTAAAA 100 35
 JI729_07840 1516371 .. 1516398 - -12.9  -5.56264   GTTAAATAGAAAAAA        TGTCCCTAAGT TATTAG ACTTAGGGACA         TTTTTTCTTAAGTGC 100 45
 JI729_07820 1512837 .. 1512864 -  -4.1  -5.13344   AGAGTAATAGAAAAA        GCCAGGGTTCT GAGTAT AGAATCTTGGC         TTTTTTGATGTTCAT  72 85
 JI729_07810 NONE
 JI729_07805 1510109 .. 1510135 - -16.8  -5.56263   ATCATAAAATAAAAA         TCACCTTCTACA ATA TGTAGAAGGTGA         TTTTTTTATTTTTTA 100 31
 JI729_07780 1504184 .. 1504203 -  -7.9  -5.04601   GCTATAAAGTAAAAA            GGCTTCA TTCTAC TGAAGCC             TTTTATTAATTGTTA  90 38
 JI729_07770 NONE
 JI729_07765 1502042 .. 1502077 -   -12  -4.34345   TATAGATTAGTAAAA    GGAGAGCTGGTTAC GATTTTGT GTAACCAGCTCTCT     TTTTATTTCGTAGAA 100 28
 JI729_07750 1499438 .. 1499467 - -18.1  -5.85425   TAAAGAAATAAAAAA       GAGACTGCCTAAA ACCA TTTAGGCAGTCTC        TTTTTCGTTAAGAAC 100 33
        asnB 1495639 .. 1495677 - -14.8  -3.24032   ATGTGCTAATTAATA   TAAAAGGAGTTCAAGGTT TTT ATCCTTGAACTCCTTTTT   GTTAAGCAATATGGA 100 27
 JI729_07725 NONE
 JI729_07720 NONE
 JI729_07715 1493058 .. 1493079 - -13.1  -3.54503   TGAATAGATAAGTAA           GGAAGCAAC TTTA GTTGCTTCC            TTTTTTTATTTATAG 100 35
 JI729_07685 1489778 .. 1489800 -  -7.8  -5.75599   TAAATGAGAAAAAAA           GGAATCCA TATTTCT TGGATTCC           TTTTTCTAATATATG 100 45
 JI729_07655 1482895 .. 1482917 - -13.5   -4.1721   ATTTATAGTTTAAAA           GGCTGTCGT GCATA ACGACAGCC           TTTTAATTTTTTGTT 100 28
 JI729_07640 NONE
 JI729_07635 1479352 .. 1479375 - -11.1  -5.38549   CTGAAAGAAGAAAAA          TGCCACTTC AAAAGA GAAGTGGCA           TTTCTTATATTTCCT 100 30
 JI729_07630 NONE
 JI729_07625 1477867 .. 1477903 -  -9.7  -3.32293   CTAAAGGTAAACATA    GAAGGAAGAAAAG TTGAAAGTTGG CTTTTCTTCCTTC    TTCTATTACATCCCC  80 395
 JI729_07530 1463601 .. 1463628 - -13.6  -5.24531   AGTTTTTATAAAAAA        TAAACCTCTCCG CAAG CAGAGAGGTTTA         TTTAGGAAACTAACT 100 49
 JI729_07525 1462537 .. 1462575 -  -9.1  -4.37658   AATTTGGGTACAAAA   TAAAAGGGAGATACATA GTTTA TATGTATTTCCCTTTTG   TTTTGTATGGAATCG 100 64
 JI729_07410 1443360 .. 1443383 -  -8.2  -2.63858   TATCATATTTACAAT          GGGCACAATA ATGG TATTGTGCCT           CCCCCTTTACATCAT  68 32
 JI729_07405 1442540 .. 1442563 - -12.5  -4.67353   CGAGTTATGTAAAAA          GGTCGTCAC TCCATT GTGACGACC           TCTTTTATATTTTTT 100 30
 JI729_07365 1433526 .. 1433572 - -24.3    -3.272   AGCAGGCTATATCAA CAATAATGAAATAAGACACTC TTGTT GAGTGTCTTATTTCATTATTG CTTGCATGCCTCAAC 100 20
 JI729_07350 1432667 .. 1432684 -  -9.9  -5.89827   AAGTATGAAAAAAAA             CAGCTCA TATT TGAGCTG              TTTTTCTATAGTTTT 100 68
 JI729_07345 1431041 .. 1431054 -  -2.5  -2.62192   TCCTATTTAATCAAG               TTTAA CTAG TTAAA                GTCTATTATTTAAGT  40 210
 JI729_07340 1429924 .. 1429948 - -14.4  -3.48105   TGAAGTGAGTAAAGA          GGCAAACCTG TGATG CAGGTTTGCC          TTTTTGAGAAGGAGA 100 369
 JI729_07320 1427129 .. 1427150 - -11.7  -5.34555   CGATATGATAAAAAA           TCCCCTTAA GCAA TTAAGGGGA            TTTTTTTATTCCTTT 100 31
 JI729_07300 1421478 .. 1421509 - -15.4  -5.60556   AAGATAAAACAAAAA      GGAGATTGCTATCT TATA AAATAGCAATCTCC       TTTTATTATAGTAAA 100 42
        cspB 1414457 .. 1414482 - -11.2  -4.54404   CAAAGGAATAACAAA         GGAGGTTACC AAGTAA GGCAACCTCC          TGTTATATGTTGGAT 100 40
 JI729_07250 1414102 .. 1414125 -   -14  -5.14563   GTTGTCATGAAAAAA          CATCCAGAGA AAAT TCTCTGGATG           TTTTTTAGTGTCTTG 100 30
 JI729_07230 1411512 .. 1411548 - -12.5  -2.62144   TCCAAATTATAAGAT    TATCCCCTACTTAAATA TTT TTTTGAAGTAGGGGATA    GAGTAGTTATCCGAT 100 32
 JI729_07225 NONE
 JI729_07220 1410064 .. 1410082 -  -3.2  -4.01939   GAAGCGACAATTAAA             CATCAA TTGCAGT TTGATG             GTAGTTATTTCGTTG  57 123
 JI729_07210 1409137 .. 1409159 -  -6.4  -5.24129   TTTTTGGATAAAAAA           GAATCCTT TTAAATG AAGGATTC           TTTTTTGAGCCAATT  82 40
 JI729_07200 1393068 .. 1393103 - -17.2  -4.89009   ATAGGTAATGAAAAA    GAGATTGTAATTTGGT TTCA ACCAAACTACAATCTC     TTTTTTGTTTCAATT 100 39
 JI729_07120 1377893 .. 1377913 -  -9.8  -4.96848   GGGGCTATATAAAAA            CCTTACGT TTTAT ACGTAAGG            TTTTTTTGTTGCATA 100 53
 JI729_07090 1375123 .. 1375170 -  -6.6  -3.02684   GTTGAAATAAAAGAT TTCAAAAAAGCATTGGCACATTT TAA AAATGAGAAAA-GCTTTTTTGAA AAGAATGACAAAGCT  60 314
 JI729_07080 1370073 .. 1370097 - -17.3  -5.11033   GAGAAGCGTAAAAAA          GCAAGGTCTCA TTA TGAGACCTTGC          TTTTCTTTTTAAGTG 100 12
 JI729_07010 1358113 .. 1358138 - -14.9  -3.78329   GTTGAGCAATGTAAA         TAACAAGAGGG AGAG CCCTCTTGTTA          TTTTTATGCTTCTGT 100 29
        recU 1355375 .. 1355387 -  -2.7  -4.77036   CTCTATCACGAAAAA                TAAAC CAT GTCTA                GTACACGGATATAGT  62 3
 JI729_06985 1352549 .. 1352581 - -17.2  -5.59534   AATGATAACAAAAAA      GAAGTCCGCTTCTC GTTAA GAGAAACGGACTTC      TTTTTTGTATATTAG 100 37
 JI729_06930 1342402 .. 1342423 -  -8.8   -4.5287   CGAAATTAAGTAAAA           GAAGTTCC TCTTTT GGAACTTC            TTTTTATTTCAATAG  89 129
 JI729_06890 1335327 .. 1335352 - -10.6  -5.45652   ACTTGTAATAAAAAA         CTAGAAAAGC TAAGGC GCTTTTCTAG          TTACATTTAATTATG 100 32
 JI729_06740 1310484 .. 1310511 - -12.2  -4.21462   ACTGATTATGTAAAA        GACGGTTTCG-TA CAA TATCGAAACCGTC        TTTTTGTATTAATTA 100 38
        ansA 1305505 .. 1305533 - -17.5  -5.71295   AGAGAAAAATAAAAA        GGAGCTGTCGGGA AAA TCTCGACAGCTCC        TTTTTATTCGTGCAT 100 29
 JI729_06650 1294928 .. 1294979 - -16.2  -3.69559   TAAGGAAAATAAAAT TTAGATACAAAAAATGCCCCTCAT CAAT ATGAGGGGCATTTTTTGAAGTTAA TAAAAGACTATTCGA 100 33
 JI729_06640 1293017 .. 1293042 - -16.3  -5.11836   ATATCTAAAAGAAAA         CCGTCCCAAAA TTTA TTTTGGGACGG          CTTCTTTTACCAAAA 100 32
        mprF 1277060 .. 1277077 -  -8.5  -6.04324   TCAAAAAAGAAAAAA             CAGCTAA GAAT TTAGCTG              TTTTTTCTTTTTCCT 100 19
        deoD 1275358 .. 1275383 -  -6.2  -5.01546   AAAGTCACATAAAAA         GAACTCGCCA GACGTA TGACAAGTTC          TTTAGTGTATTATTG  81 35
 JI729_06550 1273266 .. 1273276 -    -4  -3.34609   CTAGTGAAATTAAGA                 CAAA TTA TTTG                 ACTTCTTTTACTTTT  50 19
 JI729_06545 1272586 .. 1272611 -  -4.8   -5.5762   ACGAAATATAAAAAA         GGTTACCA AATTTTAAAA TGGTAACC          TTTTTTATGTATAAG  85 46
 JI729_06540 1272111 .. 1272151 - -15.6  -4.30023   AATGATAATAAACAA  GAAAGGCACTGTACAAAC AGGGG GAATGTACAGTGCCTTTC  TATATGAAAAAGAGG 100 190
 JI729_06530 1269797 .. 1269838 -    -9  -5.47159   GTGCAACATAAAAAA CTACATGCTAATTGTT GGGAGTGTTT AACAATTGGCATGTAG  TTCGTGGATTAGTCC 100 42
 JI729_06525 1269231 .. 1269260 - -10.1  -4.07537   AAGAAACGTAAAGAA       GGAGCACTTATCC TCCC AAACAAGTGCTCC        TTTTTATTAAAAGAG  91 120
 JI729_06520 1268620 .. 1268643 - -11.1  -4.64861   TTTTGGTAAAAGAAA          GAGGCGAAT AATGAA ATTCGCCTC           TTTTTTGTATGAAAA 100 91
 JI729_06510 NONE
 JI729_06505 1264592 .. 1264622 - -11.3  -5.24129   CTTGTTCACAAAAAA       GTCGTCTTCCT AGAAAAATA AGGAAGACGAC       TTTTGATTAGAAAAC 100 32
 JI729_06500 1263422 .. 1263438 -  -9.5  -5.14563   TTCTTCATTAAAAAA              GATGTCA ATA TGACATC              TTTTTTTATTAAATC 100 298
 JI729_06490 1262499 .. 1262519 -  -6.9  -5.71638   CAATAAGCAAAAAAA            CGAGGTA TTTATTT TACCTCG            TTTTTTATTTGTTCT  95 13
 JI729_06470 1259014 .. 1259045 - -16.1  -2.96695   TTTCCTAGGAAATGA      TAATAGAGAGGGG AAAGCA CCCCTCTCTATTA       CTTTGCTTTTGTAGA 100 23
 JI729_06460 1257162 .. 1257191 - -16.6  -5.20216   TAGATTATGAAAAAA       GGAAGCCTCACA TTATTT TGTGAGGCTTCC        TTCCTTACAACTTCA 100 30
        brnQ 1254987 .. 1255000 -  -8.1  -5.58209   TCAAATGTAAAAAAA               CTCCC TTTT GGGAG                TTTTTTTAGGAGGCT  95 31
 JI729_06400 1245402 .. 1245419 - -11.3  -5.64421   AGTGTAAATAAAAAA             CCTCGGT AGGC ACCGAGG              TTTTTTATAATCCGA 100 30
 JI729_06395 1245136 .. 1245152 -  -9.4  -5.60993   GTTTGCATAAAAAAA              GACGGG GATCT CCCGTC              TTTTTTTATGTGGAT 100 31
 JI729_06330 1231941 .. 1231971 - -11.3  -5.49568   AAGTGAAAATAAAAA       GAGGAAGCAACTT GTATA AAGTTGCTTCCTT       TACTATTCAAATTTC 100 28
        pssA 1231057 .. 1231082 - -10.5  -5.54907   GTCACAAAATAAAAA         GAAACCTTCCG GACT CGGAAGGTTTT          CTTATTTTTCTTTAT 100 27
 JI729_06220 NONE
 JI729_06215 1211807 .. 1211832 - -16.3  -5.47159   GGTGAATATAAAAAA         GAGGACTCCTT TTAA AAGGAGTCCTC          TTTCATTTTTTAAGT 100 35
 JI729_06200 1210235 .. 1210259 - -12.2  -3.46602   GTGTTTACAGGATAA          GGTATCCCGC GTTAA GCGAGATACC          TTTTTCTTTTTTAGA 100 36
 JI729_06190 1206331 .. 1206384 - -11.3   -5.0133   TATCGTTCTAAAAAA GGGAGTAAATCAAAAAAGGAGTGAA ATAA TTCACTCCTTTTTTGATTTACGATG CTGCCGATTGATCCG 100 18
 JI729_06175 NONE
 JI729_06170 1204385 .. 1204414 - -18.1  -4.21194   CTTCATTATGTAAAA       TAAAAACCTGCCG AGCT CGGCAGGTTTTTA        TTTTACTAATTTTTC 100 23
 JI729_06160 1202031 .. 1202054 -  -9.6   -5.0065   TATGCATAAAGAAAA          CAGCCGCT TTATTATT AGCGGCTG           TTTTGTGTTGTATAT 100 16
 JI729_06155 NONE
 JI729_06150 1201604 .. 1201625 -  -6.5  -5.08088   AATGCGGAATAAAAA           GGCCCTCAA GGAA TAAAGGGCC            TTTAAAGATTTTCAT  81 27
 JI729_06140 1199765 .. 1199782 -  -9.9  -3.84266   ATATCGTACATTAAA             GGATGCA ACTT TGCATCC              TTTTTTGTTGTTGAC  86 283
 JI729_06110 1196472 .. 1196486 -  -2.2  -3.32844   GTTCCCACCCTAGAA               TTCATT GTA AATAAA               TGTACTTGTGTTTGT  44 5
        dltA NONE
        dltB NONE
        dltC NONE
        dltD 1192256 .. 1192280 - -10.8   -5.1104   AAATATATACAAAAA          GACCACTTGA GTAAT TCAAGCGGTC          TTTTCATTAGTTTGC 100 32
 JI729_06080 1190111 .. 1190142 - -13.2  -2.68015   TTTAATTATTATAAG      TAAAAGGAAAAGCG TAAT CGCTTTTCCTTTTT       AATTTGAATATGGAG 100 24
 JI729_06060 1188078 .. 1188090 -  -6.3   -3.8823   ATAAAAATAAATTAA                TCTTC TGG GAAGA                TATGTTCAATATCAG  68 9
 JI729_06055 1187759 .. 1187797 - -14.2   -3.2575   AAAGCACATAATAGA   TAATTAAAAAGTAGCTCC TTA AGAGCTACTTTTTAATTT   GTAATAATTTCCACA 100 19
 JI729_05985 1176050 .. 1176075 - -14.9  -4.71234   AAATTTAACATAAAA         GCACACGATTT ATAT AAATCGTGTGC          TTTCTTTTTAAGATA 100 33
 JI729_05970 1174709 .. 1174747 - -20.6  -3.07233   TGATAATCGTTAATA   GAAAGAAAGGGCCTGTAT ACT ATATAGGCCCTTTCTTTC   TATTATATTATGCAT 100 33
        kinB 1170760 .. 1170780 -  -9.8  -5.50925   AAGGAACAGAAAAAA            CGTGATGA TTATT TCATCACG            TTTTTTGTATGAGTG 100 21
 JI729_05925 1165857 .. 1165891 - -15.4  -4.00042   GGTTTTATGAAATAA     GTATAATTACCCTTAT AGG ATAAGGATAATTATAC     TATGTGTAACGGAAT 100 20
 JI729_05915 1164162 .. 1164200 -  -9.1  -4.75174   TATTTAAGTTAAAAA   GAAAAGTACCTATCTGT TATAT ATAGATAGGTACTTTTT   TGTCCCGCTATTTGT 100 152
 JI729_05855 1151034 .. 1151060 - -16.8  -3.81951   TTGGATAGTATGAAA         CCATTCTACCTA CGT TAGGTAGAATGG         TTTTTTAGTCGTTAA 100 30
        phaQ NONE
        phaP NONE
 JI729_05815 1144043 .. 1144062 - -10.8  -5.37043   ATTGGATAGAAAAAA            GAGTAGCA AATT TGCTACTC             TTTTTTTAGTATTGT 100 20
 JI729_05810 1143684 .. 1143704 - -11.2  -4.55887   TGTGAAAAATAGAAA            GAGGCAGA GAATA TCTGCCTC            TAAGCCATATGTTAT 100 45
 JI729_05805 1142112 .. 1142138 - -10.2   -5.1848   AATGAATGCAAAAAA         GACCTCTGCC GTTAATA GGCAAAGGTC         TTGCTAGACATATGT 100 177
 JI729_05800 1141186 .. 1141215 - -18.1  -5.09521   GGAAGAAAGGAAAAA       GAAAAAGCGCTGT AATT ACAGCGCTTTTTC        GTCTAAATTCTTTTC 100 11
 JI729_05795 1140123 .. 1140143 - -12.7  -4.74103   GTGGGAAGCTAAAAA            CTCCAAAGT AAA ACTTTGGAG            TTTTTAATGCTTCAT 100 29
 JI729_05745 NONE
        glcD NONE
 JI729_05735 1127739 .. 1127775 -  -5.2  -5.39721   GTAGCAGACAAAAAA   GCGGCTATCTCTTTACA TAGA CG-AAGGAGATAGCCGT    TTTCCTATTATTACG  82 55
 JI729_05730 1126479 .. 1126500 - -11.7  -5.22943   ATGAAACTTAAAAAA           GAGTCTTCT CATG AGAAGACTC            TTTTAATCTATTTAT 100 37
 JI729_05670 NONE
 JI729_05665 1112378 .. 1112410 - -11.6  -5.06414   GCTGGGGAAGAAAAA     TAATAAAAAAGCGGG TATT CCCGCTTTTTT-TTA      TAAAGAAAAAGAAGT 100 68
 JI729_05630 1106444 .. 1106474 -    -2  -3.54475   GGTTTTATTATATAA       CATTATTATCTATT TAC AAGAGAAAATAATA       CTGTATGCAAAAATG  47 325
 JI729_05625 1105626 .. 1105643 -  -6.3  -5.36441   TTTTTATATAAAAAA             TAAGCCC CGAA GAGCTTA              TTTTAATAATAATAT  86 103
 JI729_05620 1105339 .. 1105376 - -13.7  -5.04175   TGAATTAGATAAAAA   GAGACACCATATC-ACGT AGA AGGTTGATATGGTGTCTC   TTTTTTATGACCCCG 100 31
        odhA NONE
        odhB 1098493 .. 1098519 - -18.2  -5.94214   AACACAATAAAAAAA         GGCTGTAGAATG AAT CATTCTACAGCC         TTTAATAGATTTTTA 100 46
 JI729_05585 NONE
 JI729_05580 NONE
 JI729_05575 1092970 .. 1092990 -   -14  -5.18357   TAATCTAGTAAAAAA            GCACGCCG TCCAT CGGCGTGC            TTTTAACTATGCAAA 100 28
 JI729_05560 1090402 .. 1090424 -  -4.9  -4.57837   AGAGCGCTTGAAAAA           GGTACAG TGTATATTG CTGTACC           TTTTCTATCGTTATT  68 36
 JI729_05545 1087305 .. 1087341 - -18.3   -3.5456   AAGGGGAATAATTAA    TAAGAAGAGGGCGTT TAAAAAG AACGCCCTCTTCTTA    TTTTATAAAACGAAA 100 3
        putP 1075703 .. 1075729 - -16.8  -5.09426   TCGAACTGTAAAAAA         TCTCTGCTGTTA TGA TAACAGCAGAGA         TTTTTTTATAAATTA 100 31
 JI729_05485 1075149 .. 1075188 - -13.8  -3.81539   ACTCAAATATTGAAA  TCAAGTAAAAGAGTGGCT ACGA AGCCACTCTTTTACTTTG   GATTTGTCATATAAG 100 18
 JI729_05470 1072886 .. 1072896 -  -2.6    -2.914   TCTATTATATCAAAT                 TATT CTG AATA                 CTGCTCTCTATTATT  42 36
 JI729_05465 NONE
 JI729_05460 1071844 .. 1071862 - -10.3  -5.54192   AGCAATGTAAAAAAA             CAGGAGG GGTCA CCTCCTG             CTTTCAAATTACAAT 100 34
 JI729_05455 1069697 .. 1069719 -  -4.9  -5.71712   CGTGATATAAAAAAA           GACATCC TTATTTAGT GGATGTC           TTTTCAGGTAAATCT  90 10
        cotY 1069026 .. 1069083 - -22.3  -3.53276   ATTTACATAAGAATA CTCTTTAAGCATGGATTGGGTGGCAGA ATTA TCTGCCACCCAATCCATGCTTAACTCA TTATTTAGTTTTAAA 100 36
        exsF 1068390 .. 1068416 - -13.9  -4.88736   TATTATGTATAAAAA         GCGGTATTTCT GTATT AGAAATACCGC         TTTTTACTAGCTAAT 100 32
        exsY 1067072 .. 1067094 -   -15  -3.81137   TTTTAAATATGTAAA           GGTGGTAGAA AGC TTCTACCACC           CCAATAGTTTTTTAG 100 42
 JI729_05375 1057869 .. 1057896 - -15.8  -4.81249   TTTGAAATTGAAAAA        GCAGTAAAACTG ATAT CAGTTTTACTGC         TAAGTAAAAAATTAA 100 37
 JI729_05370 NONE
 JI729_05365 1055997 .. 1056010 -  -3.1   -3.6217   ATTTATCATACATAA               CTTCC TTTC AGAAG                CTTTTTTTTGTAAGA  50 19
 JI729_05360 1054943 .. 1054972 - -12.2  -3.34962   GGTGAGAGCTGATAA       TCAGTGGGGGAT GAACAA AACCCCCACTGA        TTAAAGTTTCACTTT 100 117
 JI729_05355 NONE
        prpE 1052716 .. 1052771 - -12.3  -2.85351   TCCTGCGACATTATA TGTAGGGTAATTAAAAAAAGATGCA CTTTAT TGCATCTTTTTTTAATTACTTTACC TAGTTTTATATGAAA 100 69
 JI729_05345 1051258 .. 1051295 - -15.3  -4.70659   CGGCATACTTAAAAA   GGGAACAAAATTCTT-AT ATT ATAAAGAATTTTGTTCCC   TTTTTTCTTAGCGGA 100 33
 JI729_05320 1047672 .. 1047685 -  -3.1  -3.82628   GAGGGCAAATAAACA               GCCTT CTCA AAGAC                TCTTTGCTTATTCTA  52 107
 JI729_05315 NONE
 JI729_05310 1046291 .. 1046324 - -22.7  -3.62591   TTTATAAGCCGTAAA     GAAGAAGACCTGGTG TTTA CACCAGGTCTTCTTC      TTTTGCTATCCATTT 100 8
 JI729_05305 1045781 .. 1045802 -  -8.1  -5.33921   AAAGTAATGAAAAAA           GACGAGGGAT TGT AT-CCTCGTC           TTTTTTGTTGAATAG  93 127
 JI729_05280 1039216 .. 1039241 -  -8.5  -4.50841   ATAATAATATGAAAA         CCTTCTACCTAT TAT ATAG-TAGAAGG         TTTTTTTTAATGTTT  85 32
 JI729_05270 1037985 .. 1038000 -    -9  -6.01369   GAAATAAGAAAAAAA              GCAGGT GATC ACCTGC               TTTTTTTAATACGTT 100 31
 JI729_05260 1034396 .. 1034426 -  -9.8  -5.31855   TATCAATAAGAAAAA       GAGCCATTCTTC TGTTATG GAAGGATGGCTC       TTTTCTACTATATAA 100 131
 JI729_05230 1027632 .. 1027667 - -10.5  -5.67283   AAGGCAAACAAAAAA    GCCCATTCATCCCAA AAACTA TAGGGACGAATGGAC     CGCGGTACCACCCTA 100 331
        trpS 1026422 .. 1026451 - -16.7  -3.94846   TGAGCAAAAGGTAAA       TTAAAAAACCGCC AATT GGCGGTTTTTTAA        TTTTGTAGAAATCCA 100 158
 JI729_05185 1019666 .. 1019688 - -10.6  -6.01725   AATAAAAATAAAAAA           GAGTTCGGAT AAA ATCCGGACTC           TTTTTTTAGTGTTGT 100 31
 JI729_05170 1015293 .. 1015316 -  -4.6  -4.19746   TTTAGCTGAAAACAA          TCGACGCAATG TCT CAT-GCGTCTA          CTTATAGTATGGACA  64 75
 JI729_05165 1015125 .. 1015141 -  -2.9  -3.64822   AGTTCCCCATTTAAA              CCCCTCC AAA AGAAGAG              TTACTTCTTGCTTTT  48 4
 JI729_05160 1014898 .. 1014917 - -12.2  -4.00532   TTCGGAAAGATTAAA            GAGGACCA AAGT TGGTCCTC             TTTTTTAATGTAAAT 100 30
 JI729_05150 1013774 .. 1013799 - -13.5   -5.2696   TTAAAATGTAAAAAA         GTACATCAACA TAAT TGTTGATGTAC          GATGGAATCAAAGGT 100 33
        prsA 1012784 .. 1012815 - -15.4  -4.99972   ATAAAAGATTAAAAA      GCACAACCTTATCT AAAA AAATAAGGTTGTGC       TTTTTTAATTTCCTT 100 30
 JI729_05135 1011159 .. 1011187 - -14.8   -5.5208   CTACAAGACAAAAAA        GAAAACTCCTCT AATTA AGAGGAGTTTTC        TTTTTAGCGGTAGTT 100 29
 JI729_05120 1006358 .. 1006390 - -14.4  -4.83269   ACAGTATATTAAAAA      GAGATGCAATCTAC TATCG ATAGATTGCATCTC      TTTTTTAGTTTGCTC 100 30
 JI729_05100 1000852 .. 1000888 -    -6  -5.48028   CAAATAAAAATAAAA   CCACCTTATAATCTCAA AGAC TTGGGAG-ATAAGGTGG    TTTTTATTTTTTATG  85 36
        rocD  999094 ..  999130 -  -8.8  -5.16206   AAATGAATATAAAAA    GAAAGAGGTTGTCCCA ACATG TCGGACAACCTCTCTA    TCATTACGATAATAC 100 29
 JI729_05085  998700 ..  998724 - -11.6  -4.72029   GTGAAGTGAAGAAAA          GAGCTATCTT GTTAA AAGATAGCTC          TTTTTTATGGCCTTG 100 30
 JI729_05075  997360 ..  997379 - -12.2  -4.96996   TTGAAATAAAAGAAA            CACACGCA TTAT TGCGTGTG             TGTTTTGAATGTTTG 100 14
       gerPA NONE
       gerPB  996770 ..  996789 -  -3.5  -3.55761   GATTCATTTGTGAAA            CCTCCTT TTCAAT AGGGAGG             GTAAAAATATTCCTG  52 65
       gerPC NONE
       gerPD NONE
 JI729_05050 NONE
       gerPF  995262 ..  995280 - -11.8   -5.8901   AGATAAAAGAAAAAA             GTAGGAGA TAT TCTCCTAC             TTTTTTTACGCTGTT 100 31
 JI729_05010  984898 ..  984918 -  -6.8  -4.84529   CTACAAATGTAAAAA            GGCATTCC ATAAA GGAAGGCC            TTTTATTGTTCTTGC  80 28
 JI729_05005  984196 ..  984213 - -11.3   -5.1101   TGATGATGGAAAAAA             GGATGGC TAAT GCCATCC              TTTTTTTGTTGTGGA 100 181
 JI729_04995 NONE
 JI729_04990  982272 ..  982304 - -13.5  -4.93877   GTTTACGAAATAAAA      GGAAGGGGCACCTTT TTG AAAGGTGCCCCTTGT      TATTTTCTAAACGAT 100 100
 JI729_04935 NONE
 JI729_04930  969536 ..  969551 -  -6.8  -6.14618   CAGAAAAGAAAAAAA              GACGCC ACAT AGCGTC               TTTCCTACGAACGAA  95 30
 JI729_04915 NONE
 JI729_04910  966125 ..  966146 - -10.2   -4.7254   ATTTCGGATTAAAAA           GGAGAGCA TATCTT TGCTCTCC            TTTTCCTCATCACTG 100 35
        cytK  962567 ..  962589 -  -4.1  -5.71638   GAATAAGTAAAAAAA           CGAAGAGTT TAAAT AGCCCTTCG           TTTTTTTTACTTTAT  88 37
 JI729_04825  953974 ..  954011 - -21.7  -3.76778   AAAATCTATTAATAA   GAAAAGGTCTCCTAAAA GATA TTTTAGGAGACCTTTTC    TTTGTTTATCGTAAT 100 161
 JI729_04775  944736 ..  944757 -  -3.7  -6.04378   AAAGGACAAAAAAAA           TCCTACC GCGATTTT GGCAGGA            GGCGATGAGGTAGCA  93 350
 JI729_04760  942816 ..  942837 - -12.3    -3.694   AGTTAAAATAATGAA           TCAGCGAGG GGAT CCCCGCTGA            TTATAAGCCTGTGCT 100 26
 JI729_04715  933522 ..  933553 -  -8.9  -4.56883   TGAATAGTAAATAAA      CCCTAATTTCC AATATAGTAA GGAAATTAGGG       TTTTATTATACTTGA  89 31
 JI729_04700  929063 ..  929095 - -22.3  -4.33248   TAATCGCACAATAAA      CGAAACGCCTTCAAT CAT ATTGAAGGCGTTTCG      TTTGTTATATAAAAT 100 43
        hmoB  922495 ..  922522 -  -7.1  -5.38054   TGGTACAAAGAAAAA        GGAAACACC GGTGTGTAAT GGTGTTTCC         TTTTTGTGTCATGAT  90 201
 JI729_04605  905540 ..  905574 - -15.9  -4.30809   GAATAGGGATTAAAA     CAAGGCGTCCTACAT GTGTA ATGTAGGACGCCTTT     TCTTAGAAGCCAAGT 100 28
 JI729_04585 NONE
 JI729_04580  901244 ..  901270 - -15.3  -4.94992   GTAAATGCATAAAAA         CACGGCATATC TATAC GATATGCCGTG         TCAAGGTCAATTTAT 100 85
 JI729_04575  900360 ..  900402 -  -2.5  -4.67904   GATCAATTTGAAAAA GCGCTTCCACATCAGCTCG AAGTA CACGAAACTGCGGAAGCGC TAGCAAAACAAGGTT  62 96
 JI729_04565  899800 ..  899825 - -13.4  -5.24989   TTATAGAGGAAAAAA         GTGAGGAAGG GGCTTT CCTTCCTCAC          TTTCCATGAAATATA 100 22
        prsA  898501 ..  898520 - -11.4    -5.626   GAGGGGATAAAAAAA            GCTCGGGC CTAA GCCCAAGC             TTTTTACTGCATTAT 100 37
 JI729_04555  895718 ..  895762 -  -8.8  -4.59919   AAATGATAAAAAGAA CACCTCCATTGAATTTGCATAC TTA GTATGCGAATTCG--GGAGGTG TTTTAATATGTGTCC  89 65
 JI729_04545  894494 ..  894516 - -11.4  -3.52909   AAATAGATAGTAGAA           GAGGGTTATC ATA AATAACCCTC           TTTTTGTGTTTAAAT  93 35
 JI729_04525  891348 ..  891372 -  -7.9  -5.86976   GCATAAAATAAAAAA          GACAGAAGCCT GAG AAACTTCTGCC          TTGTGTAACCTAACT 100 83
 JI729_04440  874466 ..  874478 -  -2.7  -4.09864   AGCGAGGTGTTAAAA                CTTCT AAT AGAAA                GCATATTCGATTAAG  53 279
 JI729_04410  866363 ..  866379 -    -8   -4.7173   TAGTAGAGTGAAAAA              GAAGCG GATGA CGCTTC              TTTTTTTAGCGCTGG  85 31
 JI729_04400  865611 ..  865655 -  -7.4  -5.24551   TGAAACTAATAAAAA CACCTCCATTTAATTTGCATAC TTA GTATGCGAATTTA--GGAGGTG TTTTTTATCATTTAC  86 71
 JI729_04390  863136 ..  863157 -  -2.9  -3.93288   GTTTATCTAATTAAA           GATAGAGGA TTTT TCCACCACC            ATAGGCTTGTGATGT  52 339
 JI729_04385  861511 ..  861533 -  -9.3   -3.9373   TATTTAAAAGGTAAA           TGCAAAAGA CTTCT TCTTTTGCA           TTTAATAACTCGTCA  86 194
 JI729_04380  860663 ..  860674 -    -3  -2.67708   AAATGTAGTATATTA                TTTC TTAA GAAA                 AAGTGATAAAATGGA  42 463
 JI729_04350  858442 ..  858461 -  -9.3  -3.08782   GACCAAACTAGAAAT            CCCCCTA TTGTAT TAGGGGG             CTCGTTTTTCATAGA  76 111
 JI729_04345 NONE
 JI729_04340  854745 ..  854776 - -16.1  -5.29846   AATGCGAAATAAAAA      GCGTATGAAATCC AAATAA GGATTTCATACGC       TTTTATTGTATTTTT 100 28
 JI729_04310  850909 ..  850937 -    -9  -3.95219   TCGAAACGTTAGAAA       CCCCCACTTCAAGC TTT GCT--AAGTGGGGG       AGTGTTCATTATGTA  82 41
 JI729_04285  847435 ..  847451 -  -9.5  -4.41456   ATGATTAAAAAAAGA              GTAGGAT GTA ATCCTAC              TTTTTTTACGTTAAT 100 48
 JI729_04275  846557 ..  846584 -   -15  -3.14132   GGCTTTTTTCATGAA        GAAAGGACACTC ATGT GAGCGTCCTTTC         GATAGTTTTTAGCAG 100 34
 JI729_04270 NONE
 JI729_04265  844228 ..  844260 - -10.8  -4.79451   ATTTTAAATACAAAA      TAACCGATTCCTTA TACGT TAAGAAACCGGTTA      TTTATTTCCCTACTT 100 209
 JI729_04240  838621 ..  838636 -  -6.8   -5.3167   TAAAAATAAAGAAAA              GACACC TAAA GGTGCC               TTCCGCCGGCTTAAA  84 118
 JI729_04230  835943 ..  835953 -  -2.6  -3.50535   AACCGTTATAAAAAG                 TATT TAA AATA                 ATAACAAATAGGTAT  46 5
 JI729_04225  835048 ..  835061 -  -2.5  -5.00616   TCCTCTTTTAAAAAA               TATAT GTAA ATATA                ATAAAAAACGAATGA  64 106
        dhaS NONE
        dhaQ  830184 ..  830209 - -10.6  -4.62471   TTCAATTTGTAAAAA         GCCTTTAACT TGTTAT AGTTAAAGGC          TTTTATCATCATAAT 100 47
 JI729_04175  825962 ..  825989 -    -7  -5.04597   ACTTACATACAAAAA        GCCTTTAGTCGT AATT ATGGCTAAAGGC         TGTGGTCATTATACT  83 59
 JI729_04170  825042 ..  825069 -  -7.8  -5.33848   ATGATAAGTAAAAAA        GTACAGTCTGCT GTAG AAAAGACTGTAC         TTTTTTATGTTAGTA  90 72
 JI729_04160  824408 ..  824425 -  -7.7  -5.92337   ACATATTAAAAAAAA             GACACTC TCAA GAGTGCC              TCTCCTTAGCAGCCG 100 31
 JI729_04130  818222 ..  818257 - -11.4  -4.25458   AACCGCATCAATAAA    GGGTGGTACAAACATAT GTA ATA-GTTTGTATCACCC    TTTGTTGATGTTAGA 100 122
 JI729_04120  816258 ..  816287 - -15.9  -4.60487   CACTAGTTTCAAAAA       GCCTTCACGCAAT AATG ATTGCATGAAGGC        TTTTGATGTTTGCTT 100 39
 JI729_04090 NONE
 JI729_04085  812170 ..  812226 -  -5.7  -2.78526   CTTGATAATATAGCA TCTATTCGTGTATTAGAAAAAGTCC TACATAAGG GGACTTTTTCTAATACAT-A-TAGA TTAAAATAATAATAG  55 48
 JI729_04075  811008 ..  811024 -    -8  -3.57263   ACGGGCACTCGCAAA              CCAGGA GACAA TCCTGG              TACTTGGAAATACGT  72 492
 JI729_04060  809390 ..  809405 -    -9  -5.66684   TAATGCAGAAAAAAA              GACACC CAAA GGTGTC               TTCTGACTTGAATTA 100 141
 JI729_04050  807709 ..  807732 -  -7.6  -5.62045   ATACATAATAAAAAA          CAGTAGTG-AT TTT ATACACTACTG          TTTTTTTATTGTTTC  95 52
 JI729_04020  804216 ..  804233 -  -4.1  -4.59954   AATAACAAAAAAAGA             GTCCTAT ATTA AGAGGAC              TTTTTTTCTATTTCC  65 42
 JI729_03995  801211 ..  801235 - -10.2  -5.65927   GATTTAAATAAAAAA          GACATCTTTA AGAGG TAAAGATGTC          TTTTTATATTTCTTT 100 116
 JI729_03985  798932 ..  798961 - -12.2  -3.30124   GGTGAGGGCTGATAA       TCAGCGGGGGAT GAACAA ACCCCCCACTGA        TTAAAGTTTCACTTT 100 66
 JI729_03965  793546 ..  793568 -   -15  -4.32177   TTACTGCATAAGAAA           GAGGCTGTTT ATA AAACAGCCTC           TATGTATCTGAAAAT 100 52
 JI729_03960  792427 ..  792467 - -13.6  -3.02461   TAATTCCTTGTAACA  TGTTTTAGATGCTAACTT ATTCG AAGGCAGCATCTAAAACA  ATTAAGGTAAGAGGG 100 97
 JI729_03950  790464 ..  790491 - -15.8  -5.01546   AAATTTATATAAAAA        TAGCCGACTATT ACAT AATAGTCGGCTA         TTTTTATAAGGGGAA 100 91
 JI729_03925 NONE
 JI729_03920  784044 ..  784090 - -11.2  -3.64184   AAGACATATAAAAAG GTTTATACACCTGTTTCTTA GGGAATA TAAGAGATAGGTGTATAAAC TTTTTATTTTAACTA  93 63
 JI729_03905  781852 ..  781868 -  -2.3  -2.76322   TGATGCAAGACACGA              TCCAA TATGGCG TTGGA              CATTTTTGTCCCCTA  40 186
 JI729_03890  778432 ..  778442 -  -2.6  -4.13995   TTTTTATAAATTAAA                 TAAA ATC TTTA                 TGATTTTTTATCAGT  53 23
 JI729_03865  772210 ..  772235 - -12.1    -5.252   TATGTTTATAAAAAA         GACCTTTTATT TTAA AATAAAAGGTC          TTTTTTATGATGATT 100 389
 JI729_03710  756297 ..  756313 -  -4.4  -3.90464   TTCCAAACAATAGAA              CCAGAA TTTAT TCCTGG              AACAGAAATTTGGCA  59 155
 JI729_03700  755100 ..  755124 - -11.6  -5.46698   TTCAAAATTAAAAAA          GATCAACTCT ATTAA AGAGTTGATC          TTTGTAGTGGAAGTA 100 260
 JI729_03695  754225 ..  754278 - -16.5  -2.81702   TAATATCACTAATTA TCTATATTCAAAAACAAGAGAAGTT TTTA AACTTCTCTTGTTTTTGAATATTAT TTATTATCGTAATTC 100 22
 JI729_03690 NONE
 JI729_03685  750976 ..  750994 -  -5.3  -5.59962   TAAAATAAAGAAAAA             GCCATAC AAGTA GTATGAC             TTTCTTTGCAGAACA  86 433
 JI729_03655  745402 ..  745428 - -13.1  -5.18357   GAAGCTATGAAAAAA        CGGCAAGCGGAG TATA CTC-GCTTGCCG         TTTCCATTTCCAGTT 100 175
 JI729_03620  738825 ..  738853 - -19.1  -5.14563   TGGTGTATGAAAAAA        GCTGTACCTCTAA TAA TTAGAGGTACAGC        TTTTTACCATTCACG 100 29
 JI729_03605  736054 ..  736073 - -13.6  -4.78597   TGAATAAGAAAGAAA            GGTCACCC GTTT GGGTGACC             TTTTTTGTTTGTATT 100 200
 JI729_03585  731578 ..  731604 - -18.2   -4.3467   AGTTTTATAGGAAAA         GCATAGCGTTAC TGA GTAACGCTATGC         TTTCTTGTTGCAATG 100 7
 JI729_03565  728250 ..  728280 - -13.5  -5.72053   TAATTAAATAAAAAA      GAAGGTGCTACTGA CATT TC-GTAGCACCTTC       TTTTTTATTCAATTT 100 30
 JI729_03540  720959 ..  720973 -  -6.4   -5.9218   TATATAACAAAAAAA               GACACC TTA AGTGTC               TTCTTTGATTACTAT  95 72
 JI729_03535  720302 ..  720317 - -10.4  -5.40873   AATACAAAAAGAAAA              GGCACC CTAA GGTGCC               TCTCTTCGACTTGAA 100 396
 JI729_03520  714719 ..  714748 - -18.1  -4.49781   AAAAGATGTATAAAA       GGCATCAGAGATT ATAC AATCTCTGATGCC        TTTTAAGTGAATACA 100 78
 JI729_03490 NONE
 JI729_03485  704429 ..  704441 -  -4.9  -3.59202   CATCCTTACACATAA                TAAAG TCT CTTTA                AAATTTCCATATGTT  57 69
 JI729_03425 NONE
 JI729_03420  688945 ..  688970 -  -9.1  -4.78848   TGTGTAAATAGAAAA         CTTCCACCT TATTATCT AGGTGGAAG          TTTTTGTTTTTGTAT 100 11
        sasP  687985 ..  688018 - -12.5  -3.68738   GTTGCAATAAATTAA     GGAAGGTCTCAAGGC ATAT GCCTTGAGACCTTTT      TGCCATATATATTTA 100 38
        gapN  679636 ..  679663 -   -10  -4.61868   TATTTATATAGAAAA        GAAGGTGATTTA TAAA TAGATCACCTTC         TTTTTATAAGATTAA 100 37
 JI729_03365  676285 ..  676313 - -11.8  -5.79595   TTGCAAAAGAAAAAA        CGAGCAAATTGC GTTAT GCAACTTGCCCG        TTTTTCTTTTCGTTA 100 10
 JI729_03360  674989 ..  675018 - -10.8  -5.54338   GAAGCAAAATAAAAA       CGCCAAGGATAA TTTATT TTCTCCTTGGCG        TTTAAGATATTTCTT 100 45
 JI729_03355 NONE
 JI729_03350  672266 ..  672303 - -15.1  -4.65153   TTATACAAATCAAAA   GGTTAACCAAAGTAGCT AAAC AGCTATTTTGGCTAACC    TATAATAACTATCCC 100 34
 JI729_03345  671826 ..  671864 -   -12  -4.41548   TCAGATTGGATAAAA   CGATATGAAAAGCGAT GCTAGAA ATCGCTTTTCATATGG   CTTTTAAAATGGATC 100 29
 JI729_03325  669737 ..  669766 - -12.3  -3.33815   AGTTTTGCGAAGTAA       TAAAACCCCTTAC GACG GTAAGGGGTTTTT        GTTTTATCCTGTAAA 100 61
 JI729_03295  665190 ..  665222 -  -8.7  -5.04597   ATTTATAGAGAAAAA     GTTCCCACTATTAT TTACAG ATA-TAGTGGGAAC      ATGTATTTACATAAG 100 55
 JI729_03280  662945 ..  662967 -  -8.4  -5.60556   AAGAGAAAATAAAAA           CATCGCCAAC CCA GATGACGATG           TTTTTTCATTAAGAA  95 34
 JI729_03230  653488 ..  653517 - -12.2  -4.14193   ATAATAGTACAGAAA       GATAGCTCGCCG TTTTAT CGGCGAGCTATT        TTGTTATGCTTTTTT 100 29
 JI729_03210  649745 ..  649764 -  -7.9    -5.626   GATTTCATAAAAAAA            GCATACC GTAAAT GGTATGC             TTTTTTTATGAAATT  95 47
 JI729_03185  646847 ..  646868 -  -4.4  -5.27335   CGCTTTAAAGAAAAA           GAGGTCAA TTTTAT TTGGCCTC            TTTTTCTGTTTTATT  75 14
 JI729_03170 NONE
 JI729_03165 NONE
       cotJC  644491 ..  644511 -  -6.2  -5.80817   TTTAACATAAAAAAA            CACATATC GCTAG GATACGTG            TTTTAAAAAAATATT  95 28
        brnQ  642945 ..  642973 - -16.2  -4.21773   TGTGAAGAGAAAGAA        GAAGCAAGCATG GATTT CATGCTTGCTTC        TTTTCTTTATTTTGT 100 32
 JI729_03135  638922 ..  638932 -  -3.2  -3.17075   TGCCTTTTAAGTTAA                 TCAC TGG GCGA                 CAACCTCCATACCAT  45 15
 JI729_03130 NONE
 JI729_03125  637041 ..  637062 - -10.9  -5.76237   TAGATAAATAAAAAA           CGCAGGAGT GTAA ACTCCTACG            TTTTTGTTTATTCAT 100 33
 JI729_03120  635203 ..  635230 - -12.8  -5.73339   AGAATCATAAAAAAA        GAGCCAGCCTCA ACGA TGAGACTGACTC         TTTTTTACTAACTAG 100 37
 JI729_03075  626063 ..  626083 -  -6.1  -5.36965   TAACACGATAAAAAA            GCCACTGAA TTA TCCAGCAGC            TTTTTCCTTGTTTTT  86 14
 JI729_03070  624037 ..  624058 - -10.2  -5.73563   ATGAAATGAAAAAAA           GAGACGCT TAATGT AGCGTCTC            TTTCTTATTATAATG 100 33
 JI729_03060  621475 ..  621508 - -11.9  -5.33405   CTGACGAAATAAAAA     GAAGTAGTACTCTAC CTCC ATAGAGTACTGCTTC      TTTACTATTCATTGT 100 30
 JI729_03055  620852 ..  620886 - -15.3  -4.27617   GATATGCTATCAAAA    TAAAAGGATGGTGCTG CTTA CAGC-CCATCCTTTTA     TTTATTACCTGTAAA 100 63
 JI729_02970  607637 ..  607660 -  -3.9  -4.99645   AGTTCATAAAGAAAA          GGAAGAG TGGTGAATGG CTCTTCC           TTTTTAGCATTTTAA  68 37
 JI729_02965 NONE
 JI729_02960 NONE
 JI729_02955  603822 ..  603836 -  -2.1  -2.81966   TCAAATTGTATCAGA               CTAAG GGACA CCTAG               GGAGAAGTTTTTTTT  40 22
 JI729_02950  603240 ..  603268 - -11.9  -4.48175   AAAAGTGAATGAAAA        GAAAAAACGAGGA GTT TCCTCGTTTTTTA        AGCTTTTGGCATTGG 100 23
 JI729_02945  602864 ..  602890 - -11.6  -4.78753   TTAATATTAATAAAA         GCGCTACCCTCC TAA AGAGAATAGCGC         TATATTTTACATTTG 100 32
 JI729_02940 NONE
 JI729_02935 NONE
 JI729_02930  601530 ..  601551 - -10.9  -5.65927   GAGGGAAAGAAAAAA           CCACCTCAC GTAT ATGAGGTGG            AATAATTGTTAATAT 100 34
 JI729_02925 NONE
 JI729_02920 NONE
        scrB NONE
 JI729_02910  596505 ..  596524 - -10.8  -5.15969   GGGGAATGTAAAAAA            GCATACGA TTAA TCGTATGC             TTTTATATCTGTTAA 100 14
 JI729_02890  592911 ..  592947 - -15.4  -4.08945   ATGATTGTTGTAAAA    GAAAAGTAGAGCATCG GATTT CGATGCTCTACTTTTT    TAATGTGGTAAGAAT 100 25
 JI729_02850  586176 ..  586200 -  -7.1  -4.21827   TCAAAGAGGGTAAAA          TAGAGCCGACA TTT TGGGGGCTCTA          TTTTAATTTTTGTAC  77 23
 JI729_02755  569390 ..  569416 -    -3  -3.33661   TATTCAATTATAAGA         GGTATATTGCGT GGC ATACAATTTACC         TAACTAAATATGGCA  47 21
 JI729_02750  568873 ..  568896 -  -6.1  -5.08367   AATATAAATTAAAAA          GGATCTC-CA GTTTA TGTGAGATCC          TTTTTTGTTAGTAAA  81 203
 JI729_02620  556424 ..  556451 -   -10  -4.99035   GTAGGTAGAGAAAAA        GGGTTATCTTTA TTCG TGAAGATAACCC         TTTTCTTTTAAATGT 100 33
 JI729_02600 NONE
 JI729_02595 NONE
 JI729_02590  550504 ..  550527 - -12.6  -5.42259   TGATGTGCAAAAAAA          GAAACCTGAA TAAT TTCAGGTTTC           TTTCGTGCAAAGCAT 100 76
 JI729_02545  540874 ..  540898 -  -4.4  -5.61913   AAGAAATAGAAAAAA          GCTATCTT ATGATAAGA AAGATAGC          TGAATATTTTGTATA  82 42
 JI729_02540 NONE
        qoxB NONE
        qoxC NONE
        qoxD  536824 ..  536847 - -15.4  -5.60993   GGGGGGATAAAAAAA          GACTGCTGAG GAAT CTCAGCAGTC           TTTTTCATGTACATT 100 39
 JI729_02520  534771 ..  534821 -   -13   -2.8092   TAACATTTTACCATA TGAAGTTAAAAAAATGCCCCTCA ATTATG TGAGGGGCATTTTTTTA-CTCTA ATATGTTTTTTAGTG 100 18
 JI729_02515  534498 ..  534511 -  -2.4  -2.53233   TAATCATATTAACAT               CCTT TCTTAT AAGG                CTTTTTCTGTTAATT  39 18
 JI729_02510  534015 ..  534056 - -12.6  -3.80745   AAGAGAAGATTGAAA TATAAGAAAGGCTTTCCC GTATTG AGGAAAGCTTTTCTTATA  TCTTTTTATACAAAA 100 21
 JI729_02490  530181 ..  530209 - -10.4  -5.08178   ATATAGATATAAAAA        CATCCCTTCC AAGTAATAA GGAAGGGATG        TTTTGCTTAACTAAT 100 32
 JI729_02485  528458 ..  528479 - -13.1  -3.85879   GAGAAGTGAGAAGAA           GGCAATCCA TGTA TGGATTGCC            TTTTTTATTATTTCT 100 33
 JI729_02470  523626 ..  523646 -  -9.8  -5.38321   AAACAGCATAAAAAA            GATGAGGA GAAAT TCCTCATC            TTTTTTAATCCATCC 100 30
 JI729_02440  518356 ..  518399 - -13.6  -3.71174   AATAAATATTCTAAA TAAAATAAAAATCCCTTATA GCAG TATAAGGGATTCTTATTTTT AATTAAGAAGTTACT 100 28
 JI729_02435  517401 ..  517431 -  -9.2  -5.33866   TAAAGGTATAAAAAA      GCGAGTCATTCTA TTACAC TAG-ATGACTCGC       TTTTAATTTGTAAGT 100 47
 JI729_02430  516863 ..  516890 -  -7.1  -2.85459   TATGCATAAGAGAAG        CCCTCTTAC AGTATGAAAA GTAAGAGGG         TCCTTATCTCGTTAT  63 121
 JI729_02420  515319 ..  515342 - -12.6  -4.81551   TATGTATATGAAAAA          GCTGACAAAT AATT ATTTGTCAGC           TTTTTTTAGTGTAAT 100 14
 JI729_02385  507564 ..  507591 - -11.4  -5.05782   ATGCATTTTAAAAAA        GACAACGATGGA TTAT CCCATCATTGTC         TTTTTTACTTTGCTT 100 10
        glpT  493542 ..  493575 - -14.1  -5.54338   CAATGAAAATAAAAA     TAGCTCTTAGCATGT ATGT AAATGCTAAGAGCTA      TTTTTATGCTTGCTT 100 29
 JI729_02295 NONE
 JI729_02290  487550 ..  487588 - -15.7  -2.74747   TATAAAGTAAAGTGA   TAAAAAAACACGACTAT TGATG ATAGTCGTGTTTCTTTA   TGGATGGTAATGAAA 100 0
 JI729_02280  485947 ..  485983 - -15.3  -2.68778   CAATAGGAACAACAG    GACAAAGAAGCTGCTTA TAT TTAGCAGCTTCTTAGTC    TTCATACATATGTAA 100 20
       gerKA NONE
 JI729_02215 NONE
       gerKC  471756 ..  471804 - -18.6  -2.91264   TTGTGTATCGATATA CGAAATAAAAAGGTTGTATGCC CGAGC GGCATACAACCTTTTTATTTTA AGACACCACTATACA 100 18
 JI729_02190  465936 ..  465954 -  -9.6  -5.45652   ATTTTTAATAAAAAA             GAGAAGCC AGC AGCTTCTC             TTTATTTAATCCGTT 100 31
 JI729_02175  461619 ..  461641 -  -6.4  -5.49568   AAGGGAAAAGAAAAA           GCAATCAA GATAAAG TTGATTGC           CTACAGTAAAGGAGA  86 26
 JI729_02170  460621 ..  460639 -  -3.2  -3.86194   AATTTGTCTCATAAA             TTATCCCT CAA AGAAATAA             CTTTCTGCTAATTCA  52 7
 JI729_02165  458697 ..  458741 - -15.4  -3.79164   CCAGAAACAAAGTAA TTGAACGAAAAAACAGGAGCC ACAA GGCTCCTGTTTTCT-ATTCAA TCGTCTTCAGTAATA 100 18
 JI729_02145  455046 ..  455062 -  -6.6  -5.75478   AATGAGATAAAAAAA              CGATGA GTGAT TCATCG              TTTTTTTTATTTGGT  95 32
 JI729_02125  450969 ..  450997 - -13.3  -4.75776   AAGTGAATTGAAAAA        TAACCAGCTCC ACAGAAG GGAGCTGGTTA        AGGAAATATTATTTA 100 34
 JI729_02120  449246 ..  449269 -   -14  -5.57396   AGAAGTAATAAAAAA          GACGCTTCTA ATTT TAGAAGCGTC           TTTTTGTTATTCCAT 100 32
 JI729_02105  446113 ..  446134 - -14.5  -4.67234   ATGTAATGTGAAAAA           CACCGATCC ATTT GGATCGGTG            TTTTATTTTTAAAAG 100 34
 JI729_02085  441327 ..  441352 - -17.7  -3.68222   GGTGAAGGCTAATAA         TCAGAGTGGGG ATAG CCCCACTCTGA          TTAAAGTTTCACTTT 100 106
 JI729_02080  440040 ..  440086 - -19.3  -4.62904   AAATATGTTGAAAAA TATAATAAAAAGGCTGTCTAGA AAGA TCTAG-CAGCCTTTTTATTATA ATTTTTTATGTTCAT 100 21
 JI729_02075  438530 ..  438560 - -17.1  -4.15833   ACTATTACTGCAAAA       GAAAAAGGCGTGA TTTAC TCACGCCTTTTTC       TTTATGCTATTTGGT 100 50
 JI729_02060  436763 ..  436790 - -15.8  -4.69464   AAAATACCTCAAAAA        TAAAGAAGGAGC ATAG GCTCCTTCTTTA         TTTTTTTCTCCATTT 100 23
 JI729_02040  431768 ..  431789 -  -8.8  -5.11613   ATAGTATTGAAAAAA           CAGAGAAG GGGAAA CTTCTCTG            TTTACTTTTGTATGT 100 27
        fdhD  418312 ..  418333 - -11.7  -4.48987   TTTTTATAACTAAAA           TAACTCCTC GATT GAGGAGTTA            TTTTTTAAACATTGG 100 30
 JI729_01990  417409 ..  417431 - -12.2  -5.53288   TGTAATGCAAAAAAA           CATCTTTCTT ATT AAGAAAGATG           TTTTTGGAAAACTCC 100 198
 JI729_01985  415940 ..  415966 -    -8  -3.76888   TATTCATAATAAAGA         GTCAGTGGTATA CGA TTTCCCACTGAC         CGAAGTAATTATTCA  74 34
 JI729_01980  414411 ..  414443 -  -9.3  -4.71426   TTTTTATGAACAAAA      TAACACCAGTAGT GTTTACT ACTACTGGTGTTT      TCACACGCATATTAT 100 37
 JI729_01975  413769 ..  413789 -  -6.9  -5.46129   CAAGAAAGTAAAAAA            CATCCTC CAAACAT GAGGATG            TTTTTTATTATTTAT  89 33
 JI729_01965  411200 ..  411240 - -20.1  -4.10007   ACAATTCCTTTAAAA  TGTCAAAAGAGGTCGTA AGTTTTG TACGACCTCTTTTGACA  TTTTGTATCCCGTAA 100 102
 JI729_01960  410326 ..  410346 - -15.5  -4.29325   TATTAATAGCTAAAA            GCAGTGCCT AAA AGGCACTGC            TTTTTTGAGATAAGA 100 287
 JI729_01860  388542 ..  388567 -  -6.2  -5.55769   CTTCATAATAAAAAA         CAGTAGAGGA TTTATT TCTTCTACTG          TTTTTTGCGTCTTAT  90 37
        opuD  376736 ..  376753 -  -9.9  -4.74453   TAATAGAGTGAAAAA             CCCATTC ATAT GAATGGG              TTTTATTACGGATTT 100 65
 JI729_01755  360057 ..  360079 - -10.7  -5.03145   GAACGGCGTAAAAAA           GCTCTATAC AATTA GTATAGAGC           TTTTTTATTTTCTTT 100 100
 JI729_01660  352968 ..  353008 -  -9.5  -4.76213   ATAAATTTAATAAAA CAATTAAAAAGTTGATTT TTTAAG AAATCAACTTTTTAA-TG  AGTTGAAACATTTGT 100 71
        hemL  346593 ..  346623 - -14.3   -5.5762   ATGAAATAGAAAAAA       GGAAAAAAGAAAG GTGAG CTTTCTTTTTTCC       TTTTAATGACGGGAT 100 40
 JI729_01615  341909 ..  341927 - -13.2  -5.52384   TTTTTAGTAAAAAAA             CCTGCTGA ATT TCAGCAGG             TCTCAAATTGTTATT 100 101
 JI729_01610  340527 ..  340552 -   -12  -4.33674   AACATATAACAGAAA         CAGCTCCTTT AGCATA AAAGGAGCTG          TTTTTTTATTCGTCT 100 31
 JI729_01585  336819 ..  336840 - -10.2  -5.80003   GCAATAAATAAAAAA           GTGTTCCC AATCTA GGGAACAC            TTTTTTAATCGTAAG 100 30
 JI729_01575  334553 ..  334588 - -19.4  -3.63782   GAAGATCATTTGAAA    CATTAAAAAAAGCGAC TTAA GTCGCTTTTTTTAATG     TGGAAGTAATTCCAG 100 20
 JI729_01565 NONE
 JI729_01560  333754 ..  333788 - -12.4  -5.08601   TTATTGCAAGAAAAA     TAAAAACCAGAGAG CATATAT CTCTCTGGTTTTCA     TCTTTGGTAGGCGTT 100 58
 JI729_01545 NONE
 JI729_01540  330159 ..  330208 -    -9  -4.22314   CATGACGAAAAAACA CCCCACCCTCGAAATTTTTATA TCAATCTT TA-AAAAATTTCG-GGGTGGGA ATCGAACCCACTAGA  84 176
 JI729_01535 NONE
 JI729_01530  329284 ..  329328 - -11.8  -3.20109   GAGAAAATTATGTAA TGAAAATGAATAATTAGGGG GGAAA CTTCTAATTATTCATTTTCA CTTTAAATGCTTTTC  93 28
        glsA  313645 ..  313663 - -11.8  -5.63517   TGGCGAAATAAAAAA             TCCTGCTA GTA TAGCAGGA             TAACTCACGATTAAA 100 36
 JI729_01460  313138 ..  313153 -    -9  -4.64361   GAAAAAACATTAAAA              GCACCT ACAT AGGTGC               TTTTTTACCGTATAT  89 30
 JI729_01445  311383 ..  311408 -  -9.1   -4.3467   ATTTGTATAGTAAAA         TCGTACGAGTA TGTA TACTTGTACGA          TTTTTTAGTGAACTA  89 84
 JI729_01425 NONE
 JI729_01420  306202 ..  306219 -  -5.5  -5.95539   TGGCAAATAAAAAAA             TCGGGCT AAGT AGCTCGA              TTTTTTTAGTATTAC  93 37
       yfkAB  298888 ..  298927 - -14.6  -3.63515   TCCCACTCGCAATAA  CATGAAAAAACGTCAGCT TATA AGCTGACGTTTTTTTATA   ATGTAATGTTTGCTG 100 21
 JI729_01370  296330 ..  296352 - -13.4  -4.37658   AACTTTTCGACAAAA           CAAGCCCACC TAA GGGGGGCTTG           TTTTATTTTATAGTC 100 33
 JI729_01365  296018 ..  296054 - -16.9  -4.14764   GGCTAAATAACGAAA    TAATCCCCACCTTAT ATTTTTA ATAAGGTGGGGATTA    TTATACTACTCTGCA 100 31
 JI729_01360  295398 ..  295422 - -10.1  -5.42975   GTACATAAAGAAAAA          GAAAAACCGCT AAT AGCGGTTTTTT          TAGCTGAAAGCAATA 100 25
 JI729_01350  291535 ..  291558 -  -9.7   -6.0458   ATAAAGTAAAAAAAA          CCAAGCAAA TTTTAG TTTGCTTGG           TTTTTTTGTTAAACA 100 34
        cadA  286842 ..  286863 - -10.9  -5.88471   TATCATTAAAAAAAA           CGGGT-CCTC TAT GAGGGACCCG           TTTTATTTGCTGCCT 100 28
 JI729_01310  284351 ..  284368 -  -4.1  -4.45696   TGGAAATAAAAAAGA             GCCTC ATATAAGA GAGGC              TTTTTTACTTTTTAA  63 30
 JI729_01305  281481 ..  281516 - -16.4  -2.81559   ATTACAAGGGTAAAT    GAAAAGGCAATGAGGA AGAG TCCTCATTGCCTTTTA     GTTTCTCTTCACTAA 100 23
 JI729_01265  273775 ..  273812 -  -4.2   -4.8667   GATAGGTGATAAAAA   GGACTTTGGGCTGCAT AATAAA ATATAATCCAAAGTCC    TTTTTAGTTTTATAC  70 79
 JI729_01250 NONE
 JI729_01245  268780 ..  268820 - -15.2  -4.59773   GCGCACCTTTAAAAA TAA-AAAAGATCCTCTTCT TATG AGAAGAGGATCTTTTCTTA  TAGCGTTTTAGTCTT 100 23
 JI729_01205  262401 ..  262436 - -17.9  -4.35663   AACAATATGAATAAA    GAAAAGGCATTAGCT TTTATG AGCTAATGCCTTTTC     TTTGTGATTAACATG 100 448
 JI729_01165  251838 ..  251867 - -13.8  -5.15634   CATTTGATTAAAAAA       GCACAAACCTTT TTAAAT AAAGGTTTGTGC        TTTTTCTTTAAAACA 100 33
        topB  247505 ..  247540 - -13.5  -4.29396   AATCATTCACTAAAA    TAAAAGGTTCCTACC GATAGA GGTAGGAACCTTTTT     GTTTAATCAAATTTT 100 28
 JI729_01080 NONE
 JI729_01075  228672 ..  228684 -  -7.7  -2.74877   AAATGAACAATTAAT                CAGTG GGG CACTG                TTTATGAATCTTTTG  66 51
 JI729_01070  227885 ..  227904 -  -9.3   -4.8622   TTTTGCAATGAAAAA            GCAAGCC ATCTCA GGCTTGC             TTTTTCTTATAAAGA 100 32
 JI729_01060  224618 ..  224662 - -23.4  -3.39289   GAAAAGATTTTATAA CAAATAAAGAAGTTCAACAG TAATT CTGTTGAACTTCTTTATTTG TTTACTCATTATCAA 100 27
 JI729_01055  223194 ..  223215 -  -8.8  -4.82667   GGAGCATATGAAAAA           GAGCACAA GTAAGT TTGTGCTC            TTTTTATTTTGTAGG  91 29
 JI729_01040  220177 ..  220210 -  -3.9  -6.23545   TTTAAATAAAAAAAA     TAGAAGCAAAGGTCA ATGA TGATCTTTGCTTTTT      TTTATAGTTTGTTTA  90 38
 JI729_01000  213844 ..  213885 - -11.1  -4.41206   AAGCATCCTAGAAAA CAATTTAGCTATGTTTTGC TTAC GCAGAACATGGCTAAATTA  CGCTGTCCCTTTAGC 100 23
 JI729_00990  211352 ..  211378 - -15.4  -3.74391   CATAGAATAAAGGAA         GAGGAATTCTTA AAT TAAGAATTCCTC         ATGTTTGTATTATTT 100 35
 JI729_00985 NONE
 JI729_00980  209267 ..  209290 - -15.4  -5.39681   AGAATGAAACAAAAA          CACCCTCAAG AAAT CTTGAGGGTG           TTTTTTAAGCTTTTT 100 30
        ahpC NONE
        ahpF  203550 ..  203567 - -11.3  -5.46657   TAGGGTAATAAAAAA             CAGGTGC CAAG GCACCTG              TTTTTATTAGTTACG 100 32
        nhaC  199484 ..  199508 -  -4.4  -4.26344   AGAGGCGGAGCAAAA          TGCAAAAATT GCTCA AAGTTTTGCA          AAGAATAATCCAATA  63 389
 JI729_00930  197420 ..  197433 -  -6.7  -3.32844   TCCTTTAGCGTACAA               CGTCT TGAA AGACG                GTTAGTTCTTGTAGT  64 1
 JI729_00925  196657 ..  196680 -  -6.7   -4.5852   GAAGCGAAAGTAAAA          GGAGAGGTC ACAGCA GACATCTCC           TTTTTTCGAGTATAT  78 44
 JI729_00900  190603 ..  190628 -    -7  -5.89921   ATGACAATAAAAAAA         TCACC-TTGCT GTCTA AGCAAAGGTGA         TTTTTTATTAAATAA  95 33
 JI729_00890  188225 ..  188250 -    -4  -5.08367   AATATAAAGTAAAAA         GAGAGCTCAA AATGTA TTGAGCCCTT          ATATTTACTTAATTG  72 30
 JI729_00885  186861 ..  186897 - -17.7  -4.62772   TTGAAACCAAATAAA    TAAAGAAACACATTAGA TTA TCCAATGTGTTTCTTTA    TGGTAATAAATTTAA 100 37
 JI729_00825  174753 ..  174788 - -11.5  -2.94032   AGTGTCGAAGTAAAT    GATTGAATAAAAACCC AGATA GGGTTTT-ATTCAATC    GGAATGTTTTTCATT  87 16
 JI729_00820 NONE
 JI729_00815  173298 ..  173328 - -11.3  -4.18934   CATCACTCCAATAAA       GTATAGAAAGCCT AAAAA AGGCCCTCTATAC       AGAGATAGTTATTCA 100 34
 JI729_00810  172785 ..  172800 -    -9  -2.94126   AAGTAGAGTGATAGA              CCAGGA GTTT TCCTGG               TCTTTTTTTATGAAT  72 33
 JI729_00790  169037 ..  169069 - -15.1  -3.44146   TGGTTCGACAAGGAA      CACTCCTTTCAGT TTTGCTC ACTGAAAGGAGTG      TTTTTTTATGTAGCT 100 31
 JI729_00755  159270 ..  159299 -  -7.2  -4.43397   TGGTAAAATAAAGAA       GACTTAACCGCC CACTGC AGCAGCTAAGTC        CCTTTGAGAGCATCT  79 59
 JI729_00750 NONE
 JI729_00745  158062 ..  158083 - -14.5  -4.74706   GTTAATATGTAAAAA           TCCCGCTGA GGAA TCAGCGGGA            TTTTTTATGCATCTT 100 30
 JI729_00665  138436 ..  138457 -  -5.9  -4.70879   TTGAAATGTTAAAAA           GATACCTTA TATA TGAGGTATC            TTTTTTATTTAGCAA  75 57
 JI729_00640  129921 ..  129931 -    -4  -2.91276   TGTTCCTCTATAAAG                 TCTT TCA AAGA                 GTATTCCTCCCTTGA  48 90
 JI729_00635  129109 ..  129154 -   -23   -5.1675   TTATGTAGTAAAAAA TAATAACCCACGCTCTACTT GTATAT AAGCAGAGCGTGGGTTATTA TTTTATTTCTTTTTC 100 23
 JI729_00625 NONE
 JI729_00620 NONE
 JI729_00615  124986 ..  125002 - -10.9  -3.11178   CAAGCAACTTTAAGA              CGAGTCA GAA TGACTCG              TCTTTTTTGTATGCT  85 13
 JI729_00595 NONE
 JI729_00590 NONE
 JI729_00585 NONE
 JI729_00580 NONE
        uppP  115403 ..  115426 -  -8.3  -5.28755   AAATAGATGAAAAAA          CTGATATTC TAAATT GAATATCAG           TTTAATAATATGTGA  93 52
 JI729_00570  114570 ..  114586 - -10.9  -3.11178   CAAGCAACTTTAAGA              CGAGTCA GAA TGACTCG              TCTTTTTTGTGTTTT  85 201
 JI729_00495 NONE
 JI729_00490   92897 ..   92940 - -16.3  -2.53903   TTTTTGAAAAACTAT CCACAATAAAACGCAGAGG AAGCGA CCTCTGCGTTTTATTATTG TTTCTTCTTTGTGAA 100 20
 JI729_00480   90107 ..   90144 -  -7.9  -6.11229   ATTAAAAGAAAAAAA   GATGTCGCAT-AGTCAAA AAT CCTGACTTATGAGACATC   TTCCTTATTTAAATA 100 44
 JI729_00220   40309 ..   40334 - -13.5    -5.252   CATGTCGATAAAAAA         TAAGCTTCTCA TAAT TGAGAAGCTTA          TTTTGCTGTTTCGAT 100 23
 JI729_00110   23421 ..   23431 -    -4   -3.0471   CACAAAACAGAATTA                 TTGT AGC ACAA                 GAGGGAAGCGAGCGG  48 80
 JI729_00105 NONE
 JI729_00100   22027 ..   22054 - -12.8  -2.50398   GAAGTAATTTAATAG        GAAAACCCGTGC ATAT GCACGGGTTTTT         TATTTTACAAGTTTA 100 25
 JI729_00060   13927 ..   13946 - -10.8  -4.93547   CCAAGCAACTAAAAA            CACAAGTC ATTT GACTTGTG             TTTTTTTATTTCCCA 100 31
