locus-tag class description QR42_00005 PF11638 DnaA N-terminal domain QR42_00005 PF00308 Bacterial dnaA protein QR42_00005 PF08299 Bacterial dnaA protein helix-turn-helix QR42_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain QR42_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain QR42_00010 PF02767 DNA polymerase III beta subunit, central domain QR42_00020 PF02463 RecF/RecN/SMC N terminal domain QR42_00025 PF04025 Domain of unknown function (DUF370) QR42_00030 PF01751 Toprim domain QR42_00030 PF00986 DNA gyrase B subunit, carboxyl terminus QR42_00030 PF00204 DNA gyrase B QR42_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller QR42_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A QR42_00065 PF14175 YaaC-like Protein QR42_00070 PF00571 CBS domain QR42_00070 PF00478 IMP dehydrogenase / GMP reductase domain QR42_00075 PF07943 Penicillin-binding protein 5, C-terminal domain QR42_00075 PF00768 D-alanyl-D-alanine carboxypeptidase QR42_00080 PF00155 Aminotransferase class I and II QR42_00080 PF00392 Bacterial regulatory proteins, gntR family QR42_00085 PF01680 SOR/SNZ family QR42_00090 PF01174 SNO glutamine amidotransferase family QR42_00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QR42_00095 PF02403 Seryl-tRNA synthetase N-terminal domain QR42_00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_00110 PF01712 Deoxynucleoside kinase QR42_00115 PF01712 Deoxynucleoside kinase QR42_00120 PF01476 LysM domain QR42_00120 PF00704 Glycosyl hydrolases family 18 QR42_00125 PF00857 Isochorismatase family QR42_00130 PF14437 MafB19-like deaminase QR42_00135 PF12169 DNA polymerase III subunits gamma and tau domain III QR42_00140 PF02575 YbaB/EbfC DNA-binding family QR42_00145 PF02132 RecR protein QR42_00145 PF13662 Toprim domain QR42_00150 PF10704 Protein of unknown function (DUF2508) QR42_00155 PF07441 SigmaK-factor processing regulatory protein BofA QR42_00185 PF10764 Inhibitor of sigma-G Gin QR42_00190 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein QR42_00195 PF05816 Toxic anion resistance protein (TelA) QR42_00200 PF01276 Orn/Lys/Arg decarboxylase, major domain QR42_00200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain QR42_00205 PF02223 Thymidylate kinase QR42_00210 PF06153 Cyclic-di-AMP receptor QR42_00215 PF03885 Protein of unknown function (DUF327) QR42_00220 PF09115 DNA polymerase III, delta subunit, C terminal QR42_00225 PF04468 PSP1 C-terminal conserved region QR42_00230 PF06156 Initiation control protein YabA QR42_00235 PF05175 Methyltransferase small domain QR42_00240 PF01541 GIY-YIG catalytic domain QR42_00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases QR42_00250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin QR42_00250 PF18277 AbrB C-terminal domain QR42_00255 PF01588 Putative tRNA binding domain QR42_00255 PF09334 tRNA synthetases class I (M) QR42_00255 PF08264 Anticodon-binding domain of tRNA QR42_00260 PF01026 TatD related DNase QR42_00265 PF03990 G5-linked-Ubiquitin-like domain QR42_00265 PF06725 3D domain QR42_00265 PF07501 G5 domain QR42_00270 PF13331 Domain of unknown function (DUF4093) QR42_00270 PF13662 Toprim domain QR42_00275 PF00398 Ribosomal RNA adenine dimethylase QR42_00280 PF05582 YabG peptidase U57 QR42_00285 PF06257 Biofilm formation stimulator VEG QR42_00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type QR42_00295 PF00288 GHMP kinases N terminal domain QR42_00295 PF08544 GHMP kinases C terminal QR42_00300 PF09182 Bacterial purine repressor, N-terminal QR42_00300 PF00156 Phosphoribosyl transferase domain QR42_00305 PF01042 Endoribonuclease L-PSP QR42_00310 PF04026 SpoVG QR42_00315 PF00132 Bacterial transferase hexapeptide (six repeats) QR42_00315 PF00483 Nucleotidyl transferase QR42_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase QR42_00320 PF14572 Phosphoribosyl synthetase-associated domain QR42_00325 PF01386 Ribosomal L25p family QR42_00325 PF14693 Ribosomal protein TL5, C-terminal domain QR42_00330 PF01195 Peptidyl-tRNA hydrolase QR42_00335 PF10955 Protein of unknown function (DUF2757) QR42_00340 PF00270 DEAD/DEAH box helicase QR42_00340 PF00271 Helicase conserved C-terminal domain QR42_00340 PF03461 TRCF domain QR42_00340 PF17757 UvrB interaction domain QR42_00340 PF02559 CarD-like/TRCF domain QR42_00345 PF15714 Stage V sporulation protein T C-terminal, transcription factor QR42_00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin QR42_00350 PF14667 Polysaccharide biosynthesis C-terminal domain QR42_00350 PF01943 Polysaccharide biosynthesis protein QR42_00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases QR42_00355 PF03819 MazG nucleotide pyrophosphohydrolase domain QR42_00360 PF01479 S4 domain QR42_00365 PF07873 YabP family QR42_00370 PF09578 Spore cortex protein YabQ (Spore_YabQ) QR42_00375 PF04977 Septum formation initiator QR42_00380 PF00575 S1 RNA binding domain QR42_00395 PF07228 Stage II sporulation protein E (SpoIIE) QR42_00400 PF00092 von Willebrand factor type A domain QR42_00405 PF00069 Protein kinase domain QR42_00410 PF01171 PP-loop family QR42_00410 PF11734 TilS substrate C-terminal domain QR42_00410 PF09179 TilS substrate binding domain QR42_00420 PF00004 ATPase family associated with various cellular activities (AAA) QR42_00420 PF01434 Peptidase family M41 QR42_00420 PF06480 FtsH Extracellular QR42_00420 PF17862 AAA+ lid domain QR42_00425 PF03309 Type III pantothenate kinase QR42_00430 PF01430 Hsp33 protein QR42_00435 PF13145 PPIC-type PPIASE domain QR42_00440 PF00291 Pyridoxal-phosphate dependent enzyme QR42_00445 PF04715 Anthranilate synthase component I, N terminal region QR42_00445 PF00425 chorismate binding enzyme QR42_00450 PF00117 Glutamine amidotransferase class-I QR42_00455 PF01063 Amino-transferase class IV QR42_00460 PF00809 Pterin binding enzyme QR42_00465 PF02152 Dihydroneopterin aldolase QR42_00470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) QR42_00475 PF01381 Helix-turn-helix QR42_00480 PF01207 Dihydrouridine synthase (Dus) QR42_00485 PF01336 OB-fold nucleic acid binding domain QR42_00485 PF00152 tRNA synthetases class II (D, K and N) QR42_00565 PF17727 CtsR C-terminal dimerization domain QR42_00565 PF05848 CtsR N-terminal HTH domain QR42_00570 PF02151 UvrB/uvrC motif QR42_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain QR42_00580 PF17871 AAA lid domain QR42_00580 PF02861 Clp amino terminal domain, pathogenicity island component QR42_00580 PF10431 C-terminal, D2-small domain, of ClpB protein QR42_00580 PF00004 ATPase family associated with various cellular activities (AAA) QR42_00580 PF07724 AAA domain (Cdc48 subfamily) QR42_00585 PF18073 Rubredoxin metal binding domain QR42_00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding QR42_00590 PF10635 DisA bacterial checkpoint controller linker region QR42_00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase QR42_00605 PF02542 YgbB family QR42_00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain QR42_00615 PF00132 Bacterial transferase hexapeptide (six repeats) QR42_00615 PF06426 Serine acetyltransferase, N-terminal QR42_00620 PF01406 tRNA synthetases class I (C) catalytic domain QR42_00620 PF09190 DALR domain QR42_00625 PF00636 Ribonuclease III domain QR42_00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding QR42_00630 PF00588 SpoU rRNA Methylase family QR42_00635 PF05991 YacP-like NYN domain QR42_00640 PF08281 Sigma-70, region 4 QR42_00640 PF04542 Sigma-70 region 2 QR42_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex QR42_00650 PF02357 Transcription termination factor nusG QR42_00650 PF00467 KOW motif QR42_00655 PF03946 Ribosomal protein L11, N-terminal domain QR42_00655 PF00298 Ribosomal protein L11, RNA binding domain QR42_00660 PF00687 Ribosomal protein L1p/L10e family QR42_00665 PF00466 Ribosomal protein L10 QR42_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain QR42_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain QR42_00675 PF05175 Methyltransferase small domain QR42_00680 PF04563 RNA polymerase beta subunit QR42_00680 PF04561 RNA polymerase Rpb2, domain 2 QR42_00680 PF04565 RNA polymerase Rpb2, domain 3 QR42_00680 PF10385 RNA polymerase beta subunit external 1 domain QR42_00680 PF04560 RNA polymerase Rpb2, domain 7 QR42_00680 PF00562 RNA polymerase Rpb2, domain 6 QR42_00685 PF05000 RNA polymerase Rpb1, domain 4 QR42_00685 PF04998 RNA polymerase Rpb1, domain 5 QR42_00685 PF04997 RNA polymerase Rpb1, domain 1 QR42_00685 PF04983 RNA polymerase Rpb1, domain 3 QR42_00685 PF00623 RNA polymerase Rpb1, domain 2 QR42_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family QR42_00695 PF00164 Ribosomal protein S12/S23 QR42_00700 PF00177 Ribosomal protein S7p/S5e QR42_00705 PF00009 Elongation factor Tu GTP binding domain QR42_00705 PF03764 Elongation factor G, domain IV QR42_00705 PF00679 Elongation factor G C-terminus QR42_00705 PF03144 Elongation factor Tu domain 2 QR42_00705 PF14492 Elongation Factor G, domain II QR42_00710 PF03143 Elongation factor Tu C-terminal domain QR42_00710 PF03144 Elongation factor Tu domain 2 QR42_00710 PF00009 Elongation factor Tu GTP binding domain QR42_00715 PF12146 Serine aminopeptidase, S33 QR42_00720 PF00338 Ribosomal protein S10p/S20e QR42_00725 PF00297 Ribosomal protein L3 QR42_00730 PF00573 Ribosomal protein L4/L1 family QR42_00735 PF00276 Ribosomal protein L23 QR42_00740 PF00181 Ribosomal Proteins L2, RNA binding domain QR42_00740 PF03947 Ribosomal Proteins L2, C-terminal domain QR42_00745 PF00203 Ribosomal protein S19 QR42_00750 PF00237 Ribosomal protein L22p/L17e QR42_00755 PF07650 KH domain QR42_00755 PF00189 Ribosomal protein S3, C-terminal domain QR42_00760 PF00252 Ribosomal protein L16p/L10e QR42_00765 PF00831 Ribosomal L29 protein QR42_00770 PF00366 Ribosomal protein S17 QR42_00775 PF00238 Ribosomal protein L14p/L23e QR42_00780 PF00467 KOW motif QR42_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 QR42_00785 PF00673 ribosomal L5P family C-terminus QR42_00785 PF00281 Ribosomal protein L5 QR42_00790 PF00253 Ribosomal protein S14p/S29e QR42_00795 PF00410 Ribosomal protein S8 QR42_00800 PF00347 Ribosomal protein L6 QR42_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast QR42_00810 PF03719 Ribosomal protein S5, C-terminal domain QR42_00810 PF00333 Ribosomal protein S5, N-terminal domain QR42_00815 PF00327 Ribosomal protein L30p/L7e QR42_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A QR42_00825 PF00344 SecY translocase QR42_00830 PF05191 Adenylate kinase, active site lid QR42_00835 PF00557 Metallopeptidase family M24 QR42_00840 PF01176 Translation initiation factor 1A / IF-1 QR42_00845 PF00444 Ribosomal protein L36 QR42_00850 PF00416 Ribosomal protein S13/S18 QR42_00855 PF00411 Ribosomal protein S11 QR42_00860 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain QR42_00860 PF01000 RNA polymerase Rpb3/RpoA insert domain QR42_00860 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain QR42_00865 PF01196 Ribosomal protein L17 QR42_00870 PF00005 ABC transporter QR42_00875 PF00005 ABC transporter QR42_00880 PF02361 Cobalt transport protein QR42_00885 PF01416 tRNA pseudouridine synthase QR42_00890 PF00572 Ribosomal protein L13 QR42_00895 PF00380 Ribosomal protein S9/S16 QR42_00900 PF13302 Acetyltransferase (GNAT) domain QR42_00920 PF10730 Protein of unknown function (DUF2521) QR42_00925 PF01520 N-acetylmuramoyl-L-alanine amidase QR42_00930 PF10609 NUBPL iron-transfer P-loop NTPase QR42_00935 PF17898 Spore germination GerD central core domain QR42_00940 PF14089 KinB-signalling pathway activation in sporulation QR42_00945 PF01522 Polysaccharide deacetylase QR42_00975 PF01740 STAS domain QR42_00975 PF00916 Sulfate permease family QR42_00980 PF01758 Sodium Bile acid symporter family QR42_00985 PF07075 Protein of unknown function (DUF1343) QR42_00990 PF01915 Glycosyl hydrolase family 3 C-terminal domain QR42_00990 PF00933 Glycosyl hydrolase family 3 N terminal domain QR42_00995 PF00144 Beta-lactamase QR42_01000 PF02378 Phosphotransferase system, EIIC QR42_01000 PF00367 phosphotransferase system, EIIB QR42_01005 PF01418 Helix-turn-helix domain, rpiR family QR42_01005 PF01380 SIS domain QR42_01010 PF13580 SIS domain QR42_01040 PF00491 Arginase family QR42_01045 PF04542 Sigma-70 region 2 QR42_01045 PF08281 Sigma-70, region 4 QR42_01050 PF13490 Putative zinc-finger QR42_01055 PF02457 DisA bacterial checkpoint controller nucleotide-binding QR42_01060 PF07949 YbbR-like protein QR42_01065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain QR42_01065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II QR42_01065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I QR42_01065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III QR42_01070 PF01380 SIS domain QR42_01090 PF00005 ABC transporter QR42_01090 PF13732 Domain of unknown function (DUF4162) QR42_01105 PF00005 ABC transporter QR42_01130 PF04235 Protein of unknown function (DUF418) QR42_01140 PF00005 ABC transporter QR42_01150 PF01381 Helix-turn-helix QR42_01160 PF00561 alpha/beta hydrolase fold QR42_01165 PF17922 Tetracyclin repressor-like, C-terminal domain QR42_01165 PF00440 Bacterial regulatory proteins, tetR family QR42_01180 PF00324 Amino acid permease QR42_01185 PF03009 Glycerophosphoryl diester phosphodiesterase family QR42_01190 PF07690 Major Facilitator Superfamily QR42_01200 PF03190 Protein of unknown function, DUF255 QR42_01205 PF02801 Beta-ketoacyl synthase, C-terminal domain QR42_01205 PF00109 Beta-ketoacyl synthase, N-terminal domain QR42_01225 PF02583 Metal-sensitive transcriptional repressor QR42_01230 PF13686 DsrE/DsrF/DrsH-like family QR42_01235 PF00581 Rhodanese-like domain QR42_01240 PF00581 Rhodanese-like domain QR42_01240 PF01206 Sulfurtransferase TusA QR42_01245 PF00581 Rhodanese-like domain QR42_01245 PF00753 Metallo-beta-lactamase superfamily QR42_01250 PF01206 Sulfurtransferase TusA QR42_01255 PF01925 Sulfite exporter TauE/SafE QR42_01260 PF03129 Anticodon binding domain QR42_01260 PF09180 Prolyl-tRNA synthetase, C-terminal QR42_01260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QR42_01265 PF07690 Major Facilitator Superfamily QR42_01275 PF01047 MarR family QR42_01285 PF04463 Protein of unknown function (DUF523) QR42_01305 PF12671 Putative amidase domain QR42_01315 PF00248 Aldo/keto reductase family QR42_01320 PF00465 Iron-containing alcohol dehydrogenase QR42_01330 PF13520 Amino acid permease QR42_01340 PF03123 CAT RNA binding domain QR42_01340 PF00874 PRD domain QR42_01345 PF02378 Phosphotransferase system, EIIC QR42_01345 PF00367 phosphotransferase system, EIIB QR42_01345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QR42_01350 PF00232 Glycosyl hydrolase family 1 QR42_01365 PF05043 Mga helix-turn-helix domain QR42_01365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_01365 PF08279 HTH domain QR42_01365 PF00874 PRD domain QR42_01370 PF00480 ROK family QR42_01375 PF01074 Glycosyl hydrolases family 38 N-terminal domain QR42_01375 PF09261 Alpha mannosidase middle domain QR42_01375 PF07748 Glycosyl hydrolases family 38 C-terminal domain QR42_01385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_01390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_01390 PF00381 PTS HPr component phosphorylation site QR42_01395 PF00082 Subtilase family QR42_01395 PF17936 Bacterial Ig domain QR42_01410 PF00324 Amino acid permease QR42_01415 PF02574 Homocysteine S-methyltransferase QR42_01420 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 QR42_01420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) QR42_01425 PF03551 Transcriptional regulator PadR-like family QR42_01435 PF07690 Major Facilitator Superfamily QR42_01455 PF00082 Subtilase family QR42_01460 PF01425 Amidase QR42_01465 PF00440 Bacterial regulatory proteins, tetR family QR42_01470 PF07883 Cupin domain QR42_01475 PF13823 Alcohol dehydrogenase GroES-associated QR42_01475 PF00107 Zinc-binding dehydrogenase QR42_01475 PF08240 Alcohol dehydrogenase GroES-like domain QR42_01480 PF01047 MarR family QR42_01485 PF00501 AMP-binding enzyme QR42_01485 PF13193 AMP-binding enzyme C-terminal domain QR42_01490 PF13520 Amino acid permease QR42_01500 PF00561 alpha/beta hydrolase fold QR42_01505 PF01235 Sodium:alanine symporter family QR42_01510 PF04960 Glutaminase QR42_01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_01520 PF00072 Response regulator receiver domain QR42_01520 PF08664 YcbB domain QR42_01525 PF05225 helix-turn-helix, Psq domain QR42_01525 PF02810 SEC-C motif QR42_01530 PF17118 Domain of unknown function (DUF5105) QR42_01530 PF11611 Domain of unknown function (DUF4352) QR42_01535 PF00196 Bacterial regulatory proteins, luxR family QR42_01535 PF00072 Response regulator receiver domain QR42_01540 PF07730 Histidine kinase QR42_01550 PF00248 Aldo/keto reductase family QR42_01555 PF14501 GHKL domain QR42_01560 PF00072 Response regulator receiver domain QR42_01560 PF04397 LytTr DNA-binding domain QR42_01565 PF00005 ABC transporter QR42_01570 PF12679 ABC-2 family transporter protein QR42_01585 PF11611 Domain of unknown function (DUF4352) QR42_01585 PF17118 Domain of unknown function (DUF5105) QR42_01590 PF07486 Cell Wall Hydrolase QR42_01605 PF00296 Luciferase-like monooxygenase QR42_01610 PF02342 TerD domain QR42_01615 PF02342 TerD domain QR42_01620 PF02342 TerD domain QR42_01625 PF03741 Integral membrane protein TerC family QR42_01650 PF14266 Putative component of 'biosynthetic module' QR42_01655 PF05816 Toxic anion resistance protein (TelA) QR42_01660 PF00005 ABC transporter QR42_01660 PF00571 CBS domain QR42_01665 PF00528 Binding-protein-dependent transport system inner membrane component QR42_01670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system QR42_01685 PF01546 Peptidase family M20/M25/M40 QR42_01685 PF07687 Peptidase dimerisation domain QR42_01690 PF03606 C4-dicarboxylate anaerobic carrier QR42_01695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain QR42_01695 PF00056 lactate/malate dehydrogenase, NAD binding domain QR42_01700 PF02652 L-lactate permease QR42_01705 PF00356 Bacterial regulatory proteins, lacI family QR42_01710 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family QR42_01715 PF05116 Sucrose-6F-phosphate phosphohydrolase QR42_01720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QR42_01720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain QR42_01725 PF07690 Major Facilitator Superfamily QR42_01730 PF01810 LysE type translocator QR42_01735 PF17094 Uncharacterised protein family (UPF0715) QR42_01740 PF08892 YqcI/YcgG family QR42_01745 PF00324 Amino acid permease QR42_01750 PF09347 Domain of unknown function (DUF1989) QR42_01755 PF02540 NAD synthase QR42_01765 PF00171 Aldehyde dehydrogenase family QR42_01770 PF01487 Type I 3-dehydroquinase QR42_01775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QR42_01775 PF00205 Thiamine pyrophosphate enzyme, central domain QR42_01775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QR42_01785 PF02515 CoA-transferase family III QR42_01790 PF07690 Major Facilitator Superfamily QR42_01800 PF01614 Bacterial transcriptional regulator QR42_01800 PF09339 IclR helix-turn-helix domain QR42_01805 PF01202 Shikimate kinase QR42_01810 PF00701 Dihydrodipicolinate synthetase family QR42_01815 PF00356 Bacterial regulatory proteins, lacI family QR42_01820 PF07690 Major Facilitator Superfamily QR42_01825 PF08241 Methyltransferase domain QR42_01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_01830 PF03466 LysR substrate binding domain QR42_01835 PF00795 Carbon-nitrogen hydrolase QR42_01840 PF05448 Acetyl xylan esterase (AXE1) QR42_01850 PF10127 RNA repair pathway DNA polymerase beta family QR42_01855 PF01619 Proline dehydrogenase QR42_01860 PF00171 Aldehyde dehydrogenase family QR42_01865 PF17853 GGDEF-like domain QR42_01865 PF13556 PucR C-terminal helix-turn-helix domain QR42_01870 PF02040 Arsenical pump membrane protein QR42_01875 PF00528 Binding-protein-dependent transport system inner membrane component QR42_01880 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_01885 PF10925 Protein of unknown function (DUF2680) QR42_01890 PF12706 Beta-lactamase superfamily domain QR42_01895 PF01037 Lrp/AsnC ligand binding domain QR42_01900 PF02522 Aminoglycoside 3-N-acetyltransferase QR42_01905 PF11033 Competence protein J (ComJ) QR42_01910 PF17202 Single cache domain 3 QR42_01910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_01910 PF00672 HAMP domain QR42_01915 PF14040 Deoxyribonuclease NucA/NucB QR42_01925 PF05378 Hydantoinase/oxoprolinase N-terminal region QR42_01925 PF01968 Hydantoinase/oxoprolinase QR42_01940 PF08402 TOBE domain QR42_01940 PF00005 ABC transporter QR42_01945 PF00528 Binding-protein-dependent transport system inner membrane component QR42_01950 PF00528 Binding-protein-dependent transport system inner membrane component QR42_01955 PF00501 AMP-binding enzyme QR42_01955 PF00550 Phosphopantetheine attachment site QR42_01955 PF00668 Condensation domain QR42_01955 PF13193 AMP-binding enzyme C-terminal domain QR42_01960 PF13193 AMP-binding enzyme C-terminal domain QR42_01960 PF00668 Condensation domain QR42_01960 PF00550 Phosphopantetheine attachment site QR42_01960 PF00501 AMP-binding enzyme QR42_01965 PF13193 AMP-binding enzyme C-terminal domain QR42_01965 PF00975 Thioesterase domain QR42_01965 PF00501 AMP-binding enzyme QR42_01965 PF00550 Phosphopantetheine attachment site QR42_01965 PF00668 Condensation domain QR42_01970 PF00550 Phosphopantetheine attachment site QR42_01970 PF00668 Condensation domain QR42_01970 PF13193 AMP-binding enzyme C-terminal domain QR42_01970 PF00501 AMP-binding enzyme QR42_01975 PF00501 AMP-binding enzyme QR42_01975 PF00550 Phosphopantetheine attachment site QR42_01975 PF00668 Condensation domain QR42_01975 PF13193 AMP-binding enzyme C-terminal domain QR42_01980 PF00975 Thioesterase domain QR42_01985 PF00892 EamA-like transporter family QR42_01990 PF00392 Bacterial regulatory proteins, gntR family QR42_01990 PF00155 Aminotransferase class I and II QR42_01995 PF01648 4'-phosphopantetheinyl transferase superfamily QR42_02010 PF02872 5'-nucleotidase, C-terminal domain QR42_02010 PF00149 Calcineurin-like phosphoesterase QR42_02015 PF04203 Sortase domain QR42_02020 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin QR42_02020 PF18277 AbrB C-terminal domain QR42_02025 PF00005 ABC transporter QR42_02030 PF00528 Binding-protein-dependent transport system inner membrane component QR42_02035 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_02040 PF00324 Amino acid permease QR42_02050 PF00106 short chain dehydrogenase QR42_02055 PF03786 D-mannonate dehydratase (UxuA) QR42_02060 PF07729 FCD domain QR42_02060 PF00392 Bacterial regulatory proteins, gntR family QR42_02065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain QR42_02065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QR42_02080 PF00854 POT family QR42_02085 PF12708 Pectate lyase superfamily protein QR42_02085 PF13229 Right handed beta helix region QR42_02100 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_02105 PF00528 Binding-protein-dependent transport system inner membrane component QR42_02110 PF00005 ABC transporter QR42_02120 PF03972 MmgE/PrpD family QR42_02130 PF00072 Response regulator receiver domain QR42_02130 PF00486 Transcriptional regulatory protein, C terminal QR42_02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_02135 PF00512 His Kinase A (phospho-acceptor) domain QR42_02135 PF00672 HAMP domain QR42_02140 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain QR42_02140 PF01740 STAS domain QR42_02145 PF00696 Amino acid kinase family QR42_02145 PF13840 ACT domain QR42_02150 PF07690 Major Facilitator Superfamily QR42_02155 PF00440 Bacterial regulatory proteins, tetR family QR42_02165 PF01022 Bacterial regulatory protein, arsR family QR42_02170 PF00392 Bacterial regulatory proteins, gntR family QR42_02170 PF00155 Aminotransferase class I and II QR42_02175 PF00202 Aminotransferase class-III QR42_02180 PF13520 Amino acid permease QR42_02185 PF00171 Aldehyde dehydrogenase family QR42_02190 PF02525 Flavodoxin-like fold QR42_02195 PF07987 Domain of unkown function (DUF1775) QR42_02200 PF13115 YtkA-like QR42_02200 PF04234 CopC domain QR42_02200 PF05425 Copper resistance protein D QR42_02205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_02205 PF02378 Phosphotransferase system, EIIC QR42_02210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_02215 PF01232 Mannitol dehydrogenase Rossmann domain QR42_02215 PF08125 Mannitol dehydrogenase C-terminal domain QR42_02220 PF02743 Cache domain QR42_02220 PF00672 HAMP domain QR42_02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_02240 PF12681 Glyoxalase-like domain QR42_02245 PF05901 Excalibur calcium-binding domain QR42_02255 PF03746 LamB/YcsF family QR42_02260 PF01566 Natural resistance-associated macrophage protein QR42_02265 PF07286 Protein of unknown function (DUF1445) QR42_02270 PF02682 Carboxyltransferase domain, subdomain C and D QR42_02275 PF02626 Carboxyltransferase domain, subdomain A and B QR42_02280 PF09339 IclR helix-turn-helix domain QR42_02280 PF01614 Bacterial transcriptional regulator QR42_02285 PF02525 Flavodoxin-like fold QR42_02290 PF13472 GDSL-like Lipase/Acylhydrolase family QR42_02300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_02300 PF08279 HTH domain QR42_02300 PF05043 Mga helix-turn-helix domain QR42_02300 PF00874 PRD domain QR42_02300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_02305 PF13649 Methyltransferase domain QR42_02315 PF16242 Pyridoxamine 5'-phosphate oxidase like QR42_02330 PF00107 Zinc-binding dehydrogenase QR42_02330 PF08240 Alcohol dehydrogenase GroES-like domain QR42_02335 PF00464 Serine hydroxymethyltransferase QR42_02360 PF04055 Radical SAM superfamily QR42_02365 PF06508 Queuosine biosynthesis protein QueC QR42_02375 PF01227 GTP cyclohydrolase I QR42_02380 PF14489 QueF-like protein QR42_02385 PF08443 RimK-like ATP-grasp domain QR42_02385 PF18030 RimK PreATP-grasp domain QR42_02400 PF12823 Domain of unknown function (DUF3817) QR42_02405 PF07729 FCD domain QR42_02405 PF00392 Bacterial regulatory proteins, gntR family QR42_02410 PF12833 Helix-turn-helix domain QR42_02410 PF02311 AraC-like ligand binding domain QR42_02415 PF00892 EamA-like transporter family QR42_02420 PF00180 Isocitrate/isopropylmalate dehydrogenase QR42_02425 PF01751 Toprim domain QR42_02425 PF01131 DNA topoisomerase QR42_02435 PF00990 Diguanylate cyclase, GGDEF domain QR42_02440 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) QR42_02450 PF03170 Bacterial cellulose synthase subunit QR42_02455 PF13520 Amino acid permease QR42_02460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QR42_02460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QR42_02460 PF00205 Thiamine pyrophosphate enzyme, central domain QR42_02465 PF14449 Pre-toxin TG QR42_02465 PF04740 LXG domain of WXG superfamily QR42_02465 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues QR42_02485 PF13302 Acetyltransferase (GNAT) domain QR42_02490 PF01566 Natural resistance-associated macrophage protein QR42_02495 PF04226 Transglycosylase associated protein QR42_02500 PF12787 EcsC protein family QR42_02505 PF03480 Bacterial extracellular solute-binding protein, family 7 QR42_02510 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain QR42_02510 PF17203 Single cache domain 3 QR42_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_02515 PF08279 HTH domain QR42_02515 PF00072 Response regulator receiver domain QR42_02520 PF00375 Sodium:dicarboxylate symporter family QR42_02525 PF01594 AI-2E family transporter QR42_02530 PF00375 Sodium:dicarboxylate symporter family QR42_02535 PF00005 ABC transporter QR42_02550 PF00085 Thioredoxin QR42_02555 PF07478 D-ala D-ala ligase C-terminus QR42_02555 PF01820 D-ala D-ala ligase N-terminus QR42_02560 PF01225 Mur ligase family, catalytic domain QR42_02560 PF02875 Mur ligase family, glutamate ligase domain QR42_02560 PF08245 Mur ligase middle domain QR42_02575 PF00271 Helicase conserved C-terminal domain QR42_02575 PF00270 DEAD/DEAH box helicase QR42_02580 PF03703 Bacterial PH domain QR42_02585 PF03703 Bacterial PH domain QR42_02590 PF01694 Rhomboid family QR42_02595 PF01648 4'-phosphopantetheinyl transferase superfamily QR42_02605 PF00842 Alanine racemase, C-terminal domain QR42_02605 PF01168 Alanine racemase, N-terminal domain QR42_02610 PF01402 Ribbon-helix-helix protein, copG family QR42_02615 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system QR42_02620 PF08678 Rsbr N terminal QR42_02620 PF01740 STAS domain QR42_02625 PF01740 STAS domain QR42_02630 PF13581 Histidine kinase-like ATPase domain QR42_02635 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain QR42_02635 PF07228 Stage II sporulation protein E (SpoIIE) QR42_02640 PF01740 STAS domain QR42_02645 PF13581 Histidine kinase-like ATPase domain QR42_02650 PF04545 Sigma-70, region 4 QR42_02650 PF04542 Sigma-70 region 2 QR42_02650 PF04539 Sigma-70 region 3 QR42_02655 PF07228 Stage II sporulation protein E (SpoIIE) QR42_02660 PF09371 Tex-like protein N-terminal domain QR42_02660 PF00575 S1 RNA binding domain QR42_02660 PF17674 HHH domain QR42_02660 PF16921 Tex protein YqgF-like domain QR42_02665 PF17283 SprT-like zinc ribbon domain QR42_02665 PF10263 SprT-like family QR42_02670 PF00676 Dehydrogenase E1 component QR42_02675 PF02779 Transketolase, pyrimidine binding domain QR42_02675 PF02780 Transketolase, C-terminal domain QR42_02680 PF00364 Biotin-requiring enzyme QR42_02680 PF02817 e3 binding domain QR42_02680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) QR42_02685 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_02685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QR42_02690 PF00158 Sigma-54 interaction domain QR42_02690 PF02954 Bacterial regulatory protein, Fis family QR42_02690 PF01590 GAF domain QR42_02730 PF00561 alpha/beta hydrolase fold QR42_02735 PF00313 'Cold-shock' DNA-binding domain QR42_02740 PF02559 CarD-like/TRCF domain QR42_02745 PF08240 Alcohol dehydrogenase GroES-like domain QR42_02745 PF00107 Zinc-binding dehydrogenase QR42_02750 PF13411 MerR HTH family regulatory protein QR42_02755 PF00722 Glycosyl hydrolases family 16 QR42_02760 PF00440 Bacterial regulatory proteins, tetR family QR42_02765 PF07690 Major Facilitator Superfamily QR42_02770 PF00155 Aminotransferase class I and II QR42_02775 PF02423 Ornithine cyclodeaminase/mu-crystallin family QR42_02780 PF03466 LysR substrate binding domain QR42_02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_02795 PF00106 short chain dehydrogenase QR42_02805 PF17763 Glutaminase/Asparaginase C-terminal domain QR42_02805 PF00710 Asparaginase, N-terminal QR42_02810 PF00561 alpha/beta hydrolase fold QR42_02820 PF00440 Bacterial regulatory proteins, tetR family QR42_02820 PF16925 Tetracyclin repressor-like, C-terminal domain QR42_02825 PF07690 Major Facilitator Superfamily QR42_02830 PF12746 GNAT acetyltransferase QR42_02845 PF00583 Acetyltransferase (GNAT) family QR42_02850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QR42_02860 PF00440 Bacterial regulatory proteins, tetR family QR42_02865 PF01872 RibD C-terminal domain QR42_02870 PF01047 MarR family QR42_02875 PF00881 Nitroreductase family QR42_02890 PF01381 Helix-turn-helix QR42_02890 PF07883 Cupin domain QR42_02895 PF01810 LysE type translocator QR42_02910 PF01596 O-methyltransferase QR42_02920 PF03591 AzlC protein QR42_02925 PF00892 EamA-like transporter family QR42_02935 PF00375 Sodium:dicarboxylate symporter family QR42_02975 PF00586 AIR synthase related protein, N-terminal domain QR42_02975 PF02769 AIR synthase related protein, C-terminal domain QR42_02980 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE QR42_02985 PF00814 Glycoprotease family QR42_02990 PF00583 Acetyltransferase (GNAT) family QR42_02995 PF00814 Glycoprotease family QR42_03000 PF00005 ABC transporter QR42_03000 PF16326 ABC transporter C-terminal domain QR42_03000 PF12848 ABC transporter QR42_03005 PF01967 MoaC family QR42_03010 PF06971 Putative DNA-binding protein N-terminus QR42_03010 PF02629 CoA binding domain QR42_03015 PF02416 mttA/Hcf106 family QR42_03020 PF00902 Sec-independent protein translocase protein (TatC) QR42_03030 PF14146 Domain of unknown function (DUF4305) QR42_03035 PF02517 CPBP intramembrane metalloprotease QR42_03040 PF00166 Chaperonin 10 Kd subunit QR42_03045 PF00118 TCP-1/cpn60 chaperonin family QR42_03085 PF03330 Lytic transglycolase QR42_03090 PF07676 WD40-like Beta Propeller Repeat QR42_03100 PF00394 Multicopper oxidase QR42_03100 PF07731 Multicopper oxidase QR42_03100 PF07732 Multicopper oxidase QR42_03105 PF00324 Amino acid permease QR42_03110 PF16916 Dimerisation domain of Zinc Transporter QR42_03110 PF01545 Cation efflux family QR42_03115 PF17863 AAA lid domain QR42_03115 PF07726 ATPase family associated with various cellular activities (AAA) QR42_03120 PF01882 Protein of unknown function DUF58 QR42_03125 PF13559 Domain of unknown function (DUF4129) QR42_03125 PF11992 Domain of unknown function (DUF3488) QR42_03125 PF01841 Transglutaminase-like superfamily QR42_03130 PF02540 NAD synthase QR42_03130 PF00958 GMP synthase C terminal domain QR42_03130 PF00117 Glutamine amidotransferase class-I QR42_03135 PF04073 Aminoacyl-tRNA editing domain QR42_03140 PF12833 Helix-turn-helix domain QR42_03145 PF00682 HMGL-like QR42_03145 PF08502 LeuA allosteric (dimerisation) domain QR42_03165 PF13302 Acetyltransferase (GNAT) domain QR42_03175 PF08281 Sigma-70, region 4 QR42_03175 PF04542 Sigma-70 region 2 QR42_03185 PF07690 Major Facilitator Superfamily QR42_03190 PF03466 LysR substrate binding domain QR42_03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_03195 PF00860 Permease family QR42_03210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) QR42_03215 PF14044 NETI protein QR42_03220 PF00731 AIR carboxylase QR42_03225 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain QR42_03225 PF02222 ATP-grasp domain QR42_03230 PF10397 Adenylosuccinate lyase C-terminus QR42_03230 PF00206 Lyase QR42_03235 PF01259 SAICAR synthetase QR42_03240 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase QR42_03250 PF02769 AIR synthase related protein, C-terminal domain QR42_03250 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain QR42_03250 PF00586 AIR synthase related protein, N-terminal domain QR42_03255 PF00156 Phosphoribosyl transferase domain QR42_03260 PF00586 AIR synthase related protein, N-terminal domain QR42_03260 PF02769 AIR synthase related protein, C-terminal domain QR42_03265 PF00551 Formyl transferase QR42_03270 PF02142 MGS-like domain QR42_03270 PF01808 AICARFT/IMPCHase bienzyme QR42_03275 PF02844 Phosphoribosylglycinamide synthetase, N domain QR42_03275 PF02843 Phosphoribosylglycinamide synthetase, C domain QR42_03275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain QR42_03295 PF00202 Aminotransferase class-III QR42_03300 PF01144 Coenzyme A transferase QR42_03305 PF01144 Coenzyme A transferase QR42_03310 PF07687 Peptidase dimerisation domain QR42_03310 PF01546 Peptidase family M20/M25/M40 QR42_03315 PF11127 Protein of unknown function (DUF2892) QR42_03320 PF01979 Amidohydrolase family QR42_03320 PF13382 Adenine deaminase C-terminal domain QR42_03325 PF01371 Trp repressor protein QR42_03330 PF01645 Conserved region in glutamate synthase QR42_03345 PF01884 PcrB family QR42_03350 PF00580 UvrD/REP helicase N-terminal domain QR42_03350 PF13361 UvrD-like helicase C-terminal domain QR42_03355 PF12826 Helix-hairpin-helix motif QR42_03355 PF03120 NAD-dependent DNA ligase OB-fold domain QR42_03355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain QR42_03355 PF00533 BRCA1 C Terminus (BRCT) domain QR42_03355 PF01653 NAD-dependent DNA ligase adenylation domain QR42_03360 PF07537 CamS sex pheromone cAM373 precursor QR42_03365 PF01636 Phosphotransferase enzyme family QR42_03370 PF02308 MgtC family QR42_03375 PF00474 Sodium:solute symporter family QR42_03380 PF02686 Glu-tRNAGln amidotransferase C subunit QR42_03385 PF01425 Amidase QR42_03390 PF02934 GatB/GatE catalytic domain QR42_03390 PF02637 GatB domain QR42_03395 PF00440 Bacterial regulatory proteins, tetR family QR42_03400 PF00873 AcrB/AcrD/AcrF family QR42_03405 PF01156 Inosine-uridine preferring nucleoside hydrolase QR42_03410 PF00781 Diacylglycerol kinase catalytic domain QR42_03415 PF05958 tRNA (Uracil-5-)-methyltransferase QR42_03415 PF01938 TRAM domain QR42_03420 PF01207 Dihydrouridine synthase (Dus) QR42_03430 PF01380 SIS domain QR42_03430 PF01418 Helix-turn-helix domain, rpiR family QR42_03435 PF00367 phosphotransferase system, EIIB QR42_03435 PF02378 Phosphotransferase system, EIIC QR42_03440 PF11975 Family 4 glycosyl hydrolase C-terminal domain QR42_03440 PF02056 Family 4 glycosyl hydrolase QR42_03450 PF02082 Transcriptional regulator QR42_03455 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_03470 PF11975 Family 4 glycosyl hydrolase C-terminal domain QR42_03470 PF02056 Family 4 glycosyl hydrolase QR42_03475 PF01380 SIS domain QR42_03475 PF01418 Helix-turn-helix domain, rpiR family QR42_03480 PF07690 Major Facilitator Superfamily QR42_03490 PF03466 LysR substrate binding domain QR42_03490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_03500 PF13037 Domain of unknown function (DUF3898) QR42_03500 PF13039 Protein of unknown function (DUF3900) QR42_03505 PF00483 Nucleotidyl transferase QR42_03510 PF16363 GDP-mannose 4,6 dehydratase QR42_03515 PF03407 Nucleotide-diphospho-sugar transferase QR42_03520 PF00535 Glycosyl transferase family 2 QR42_03525 PF03407 Nucleotide-diphospho-sugar transferase QR42_03530 PF07690 Major Facilitator Superfamily QR42_03535 PF03717 Penicillin-binding Protein dimerisation domain QR42_03535 PF00905 Penicillin binding protein transpeptidase domain QR42_03535 PF05223 NTF2-like N-terminal transpeptidase domain QR42_03545 PF01965 DJ-1/PfpI family QR42_03560 PF00011 Hsp20/alpha crystallin family QR42_03575 PF13520 Amino acid permease QR42_03580 PF00535 Glycosyl transferase family 2 QR42_03585 PF00005 ABC transporter QR42_03585 PF16326 ABC transporter C-terminal domain QR42_03585 PF12848 ABC transporter QR42_03590 PF02649 Type I GTP cyclohydrolase folE2 QR42_03595 PF13411 MerR HTH family regulatory protein QR42_03600 PF07690 Major Facilitator Superfamily QR42_03605 PF00005 ABC transporter QR42_03605 PF12848 ABC transporter QR42_03610 PF00270 DEAD/DEAH box helicase QR42_03610 PF00271 Helicase conserved C-terminal domain QR42_03625 PF16884 N-terminal domain of oxidoreductase QR42_03625 PF00107 Zinc-binding dehydrogenase QR42_03630 PF11486 Protein of unknown function (DUF3212) QR42_03635 PF11181 Heat induced stress protein YflT QR42_03645 PF00925 GTP cyclohydrolase II QR42_03645 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase QR42_03650 PF03781 Sulfatase-modifying factor enzyme 1 QR42_03660 PF01872 RibD C-terminal domain QR42_03660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region QR42_03675 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain QR42_03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_03680 PF00072 Response regulator receiver domain QR42_03680 PF12431 Transcriptional regulator QR42_03680 PF08279 HTH domain QR42_03685 PF03401 Tripartite tricarboxylate transporter family receptor QR42_03690 PF03600 Citrate transporter QR42_03700 PF05870 Phenolic acid decarboxylase (PAD) QR42_03705 PF10400 Virulence activator alpha C-term QR42_03705 PF03551 Transcriptional regulator PadR-like family QR42_03710 PF02898 Nitric oxide synthase, oxygenase domain QR42_03715 PF00708 Acylphosphatase QR42_03720 PF03475 3-alpha domain QR42_03720 PF03473 MOSC domain QR42_03725 PF00557 Metallopeptidase family M24 QR42_03730 PF00367 phosphotransferase system, EIIB QR42_03730 PF02378 Phosphotransferase system, EIIC QR42_03735 PF05675 Protein of unknown function (DUF817) QR42_03750 PF14172 Domain of unknown function (DUF4309) QR42_03755 PF00884 Sulfatase QR42_03760 PF00282 Pyridoxal-dependent decarboxylase conserved domain QR42_03765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_03765 PF00672 HAMP domain QR42_03770 PF09350 Domain of unknown function (DUF1992) QR42_03775 PF00367 phosphotransferase system, EIIB QR42_03775 PF02378 Phosphotransferase system, EIIC QR42_03780 PF16657 Maltogenic Amylase, C-terminal domain QR42_03780 PF00128 Alpha amylase, catalytic domain QR42_03785 PF07702 UTRA domain QR42_03785 PF00392 Bacterial regulatory proteins, gntR family QR42_03795 PF00149 Calcineurin-like phosphoesterase QR42_03795 PF02872 5'-nucleotidase, C-terminal domain QR42_03800 PF01965 DJ-1/PfpI family QR42_03805 PF06569 Protein of unknown function (DUF1128) QR42_03810 PF01235 Sodium:alanine symporter family QR42_03815 PF01451 Low molecular weight phosphotyrosine protein phosphatase QR42_03825 PF03631 Virulence factor BrkB QR42_03830 PF07690 Major Facilitator Superfamily QR42_03840 PF01699 Sodium/calcium exchanger protein QR42_03845 PF14167 YfkD-like protein QR42_03850 PF01709 Transcriptional regulator QR42_03860 PF00924 Mechanosensitive ion channel QR42_03865 PF04055 Radical SAM superfamily QR42_03865 PF08756 YfkB-like domain QR42_03875 PF01522 Polysaccharide deacetylase QR42_03880 PF01544 CorA-like Mg2+ transporter protein QR42_03890 PF00730 HhH-GPD superfamily base excision DNA repair protein QR42_03895 PF05958 tRNA (Uracil-5-)-methyltransferase QR42_03895 PF01938 TRAM domain QR42_03910 PF07739 TipAS antibiotic-recognition domain QR42_03910 PF13411 MerR HTH family regulatory protein QR42_03915 PF07690 Major Facilitator Superfamily QR42_03925 PF02824 TGS domain QR42_03925 PF03129 Anticodon binding domain QR42_03925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain QR42_03925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QR42_03970 PF00893 Small Multidrug Resistance protein QR42_03975 PF00893 Small Multidrug Resistance protein QR42_03980 PF17934 Tetracyclin repressor-like, C-terminal domain QR42_03980 PF00440 Bacterial regulatory proteins, tetR family QR42_03995 PF00657 GDSL-like Lipase/Acylhydrolase QR42_04000 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_04005 PF07883 Cupin domain QR42_04005 PF12833 Helix-turn-helix domain QR42_04010 PF01497 Periplasmic binding protein QR42_04015 PF00664 ABC transporter transmembrane region QR42_04015 PF00005 ABC transporter QR42_04020 PF02694 Uncharacterised BCR, YnfA/UPF0060 family QR42_04025 PF04545 Sigma-70, region 4 QR42_04025 PF04542 Sigma-70 region 2 QR42_04040 PF00107 Zinc-binding dehydrogenase QR42_04040 PF08240 Alcohol dehydrogenase GroES-like domain QR42_04055 PF01047 MarR family QR42_04060 PF09924 Uncharacterised conserved protein (DUF2156) QR42_04060 PF03706 Lysylphosphatidylglycerol synthase TM region QR42_04075 PF18801 response regulator aspartate phosphatase H, N terminal QR42_04080 PF00881 Nitroreductase family QR42_04090 PF01370 NAD dependent epimerase/dehydratase family QR42_04090 PF08338 Domain of unknown function (DUF1731) QR42_04095 PF02631 RecX family QR42_04100 PF08838 Protein of unknown function (DUF1811) QR42_04105 PF08176 Small acid-soluble spore protein K family QR42_04110 PF14043 WVELL protein QR42_04115 PF00535 Glycosyl transferase family 2 QR42_04120 PF09586 Bacterial membrane protein YfhO QR42_04130 PF00190 Cupin QR42_04135 PF04545 Sigma-70, region 4 QR42_04145 PF04307 LexA-binding, inner membrane-associated putative hydrolase QR42_04150 PF14815 NUDIX domain QR42_04150 PF00730 HhH-GPD superfamily base excision DNA repair protein QR42_04165 PF04259 Small, acid-soluble spore protein, gamma-type QR42_04175 PF04167 Protein of unknown function (DUF402) QR42_04180 PF00005 ABC transporter QR42_04180 PF00664 ABC transporter transmembrane region QR42_04185 PF00005 ABC transporter QR42_04185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_04190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_04190 PF00005 ABC transporter QR42_04195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QR42_04210 PF06081 Aromatic acid exporter family member 1 QR42_04215 PF00202 Aminotransferase class-III QR42_04220 PF00578 AhpC/TSA family QR42_04225 PF01475 Ferric uptake regulator family QR42_04230 PF11023 Zinc-ribbon containing domain QR42_04235 PF14540 Nucleotidyltransferase-like QR42_04235 PF18576 Helix-turn-helix domain QR42_04375 PF00884 Sulfatase QR42_04380 PF10502 Signal peptidase, peptidase S26 QR42_04385 PF01053 Cys/Met metabolism PLP-dependent enzyme QR42_04395 PF00005 ABC transporter QR42_04400 PF09084 NMT1/THI5 like QR42_04405 PF00528 Binding-protein-dependent transport system inner membrane component QR42_04410 PF00296 Luciferase-like monooxygenase QR42_04420 PF00005 ABC transporter QR42_04455 PF08331 Domain of unknown function (DUF1730) QR42_04460 PF12671 Putative amidase domain QR42_04465 PF00588 SpoU rRNA Methylase family QR42_04470 PF15493 Domain of unknown function, YrpD QR42_04475 PF08298 PrkA AAA domain QR42_04475 PF06798 PrkA serine protein kinase C-terminal domain QR42_04480 PF04285 Protein of unknown function (DUF444) QR42_04490 PF07690 Major Facilitator Superfamily QR42_04495 PF03358 NADPH-dependent FMN reductase QR42_04505 PF00313 'Cold-shock' DNA-binding domain QR42_04510 PF07694 5TMR of 5TMR-LYT QR42_04510 PF00990 Diguanylate cyclase, GGDEF domain QR42_04525 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) QR42_04535 PF07875 Coat F domain QR42_04540 PF13188 PAS domain QR42_04540 PF00989 PAS fold QR42_04540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_04540 PF13426 PAS domain QR42_04540 PF00512 His Kinase A (phospho-acceptor) domain QR42_04545 PF02872 5'-nucleotidase, C-terminal domain QR42_04545 PF00149 Calcineurin-like phosphoesterase QR42_04545 PF00565 Staphylococcal nuclease homologue QR42_04545 PF00746 LPXTG cell wall anchor motif QR42_04550 PF04203 Sortase domain QR42_04555 PF01479 S4 domain QR42_04555 PF00849 RNA pseudouridylate synthase QR42_04565 PF13419 Haloacid dehalogenase-like hydrolase QR42_04570 PF00795 Carbon-nitrogen hydrolase QR42_04570 PF00583 Acetyltransferase (GNAT) family QR42_04585 PF13556 PucR C-terminal helix-turn-helix domain QR42_04585 PF17853 GGDEF-like domain QR42_04585 PF05651 Putative sugar diacid recognition QR42_04590 PF00202 Aminotransferase class-III QR42_04595 PF04309 Glycerol-3-phosphate responsive antiterminator QR42_04600 PF00230 Major intrinsic protein QR42_04605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain QR42_04605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain QR42_04610 PF16901 C-terminal domain of alpha-glycerophosphate oxidase QR42_04610 PF01266 FAD dependent oxidoreductase QR42_04615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I QR42_04615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II QR42_04615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain QR42_04615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III QR42_04620 PF13185 GAF domain QR42_04620 PF07730 Histidine kinase QR42_04625 PF00196 Bacterial regulatory proteins, luxR family QR42_04625 PF00072 Response regulator receiver domain QR42_04635 PF14148 YhdB-like protein QR42_04640 PF13028 Protein of unknown function (DUF3889) QR42_04645 PF06628 Catalase-related immune-responsive QR42_04645 PF00199 Catalase QR42_04650 PF02082 Transcriptional regulator QR42_04655 PF00042 Globin QR42_04655 PF00970 Oxidoreductase FAD-binding domain QR42_04655 PF00175 Oxidoreductase NAD-binding domain QR42_04660 PF04293 SpoVR like protein QR42_04665 PF00245 Alkaline phosphatase QR42_04670 PF00877 NlpC/P60 family QR42_04670 PF01476 LysM domain QR42_04675 PF13520 Amino acid permease QR42_04680 PF17453 Sigma-M inhibitor QR42_04685 PF13791 Sigma factor regulator C-terminal QR42_04685 PF13800 Sigma factor regulator N-terminal QR42_04690 PF08281 Sigma-70, region 4 QR42_04690 PF04542 Sigma-70 region 2 QR42_04695 PF01553 Acyltransferase QR42_04700 PF03471 Transporter associated domain QR42_04700 PF00571 CBS domain QR42_04700 PF01595 Cyclin M transmembrane N-terminal domain QR42_04705 PF13411 MerR HTH family regulatory protein QR42_04710 PF01595 Cyclin M transmembrane N-terminal domain QR42_04710 PF00571 CBS domain QR42_04710 PF03471 Transporter associated domain QR42_04720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) QR42_04725 PF02537 CrcB-like protein, Camphor Resistance (CrcB) QR42_04730 PF03009 Glycerophosphoryl diester phosphodiesterase family QR42_04735 PF00924 Mechanosensitive ion channel QR42_04740 PF02146 Sir2 family QR42_04750 PF07690 Major Facilitator Superfamily QR42_04755 PF01494 FAD binding domain QR42_04765 PF01522 Polysaccharide deacetylase QR42_04770 PF01063 Amino-transferase class IV QR42_04775 PF00582 Universal stress protein family QR42_04780 PF00664 ABC transporter transmembrane region QR42_04780 PF00005 ABC transporter QR42_04785 PF00005 ABC transporter QR42_04785 PF00664 ABC transporter transmembrane region QR42_04795 PF13460 NAD(P)H-binding QR42_04800 PF00269 Small, acid-soluble spore proteins, alpha/beta type QR42_04805 PF03459 TOBE domain QR42_04805 PF00005 ABC transporter QR42_04805 PF17912 MalK OB fold domain QR42_04810 PF13556 PucR C-terminal helix-turn-helix domain QR42_04815 PF17277 Family of unknown function (DUF5342) QR42_04820 PF14398 YheC/D like ATP-grasp QR42_04825 PF14398 YheC/D like ATP-grasp QR42_04830 PF04286 Protein of unknown function (DUF445) QR42_04835 PF06133 Control of competence regulator ComK, YlbF/YmcA QR42_04845 PF04055 Radical SAM superfamily QR42_04850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) QR42_04855 PF00999 Sodium/hydrogen exchanger family QR42_04860 PF02080 TrkA-C domain QR42_04875 PF00378 Enoyl-CoA hydratase/isomerase QR42_04880 PF14120 YhzD-like protein QR42_04885 PF00149 Calcineurin-like phosphoesterase QR42_04890 PF13514 AAA domain QR42_04895 PF01966 HD domain QR42_04900 PF14147 Sporulation protein YhaL QR42_04910 PF09680 Family of unknown function QR42_04915 PF09680 Family of unknown function QR42_04920 PF11667 Putative zincin peptidase QR42_04925 PF08963 Protein of unknown function (DUF1878) QR42_04930 PF01047 MarR family QR42_04935 PF12732 YtxH-like protein QR42_04945 PF17099 Tryptophan transporter TrpP QR42_04950 PF00266 Aminotransferase class-V QR42_04955 PF01230 HIT domain QR42_04960 PF00005 ABC transporter QR42_04965 PF05975 Bacterial ABC transporter protein EcsB QR42_04970 PF12787 EcsC protein family QR42_04975 PF07687 Peptidase dimerisation domain QR42_04975 PF01546 Peptidase family M20/M25/M40 QR42_04985 PF03992 Antibiotic biosynthesis monooxygenase QR42_04990 PF00905 Penicillin binding protein transpeptidase domain QR42_04990 PF00912 Transglycosylase QR42_04995 PF01208 Uroporphyrinogen decarboxylase (URO-D) QR42_05010 PF17932 Tetracyclin repressor-like, C-terminal domain QR42_05010 PF00440 Bacterial regulatory proteins, tetR family QR42_05020 PF05343 M42 glutamyl aminopeptidase QR42_05025 PF00375 Sodium:dicarboxylate symporter family QR42_05030 PF12706 Beta-lactamase superfamily domain QR42_05035 PF03099 Biotin/lipoate A/B protein ligase family QR42_05035 PF10437 Bacterial lipoate protein ligase C-terminus QR42_05040 PF00501 AMP-binding enzyme QR42_05040 PF13193 AMP-binding enzyme C-terminal domain QR42_05050 PF01435 Peptidase family M48 QR42_05050 PF16491 CAAX prenyl protease N-terminal, five membrane helices QR42_05055 PF00082 Subtilase family QR42_05055 PF05922 Peptidase inhibitor I9 QR42_05060 PF00300 Histidine phosphatase superfamily (branch 1) QR42_05065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_05070 PF01266 FAD dependent oxidoreductase QR42_05070 PF00355 Rieske [2Fe-2S] domain QR42_05080 PF08858 IDEAL domain QR42_05085 PF06338 ComK protein QR42_05095 PF00392 Bacterial regulatory proteins, gntR family QR42_05095 PF00155 Aminotransferase class I and II QR42_05100 PF07690 Major Facilitator Superfamily QR42_05105 PF01337 Barstar (barnase inhibitor) QR42_05110 PF03816 Cell envelope-related transcriptional attenuator domain QR42_05120 PF09335 SNARE associated Golgi protein QR42_05125 PF10502 Signal peptidase, peptidase S26 QR42_05130 PF05145 Transition state regulatory protein AbrB QR42_05140 PF01435 Peptidase family M48 QR42_05145 PF07681 DoxX QR42_05150 PF02915 Rubrerythrin QR42_05155 PF12705 PD-(D/E)XK nuclease superfamily QR42_05160 PF13361 UvrD-like helicase C-terminal domain QR42_05160 PF00580 UvrD/REP helicase N-terminal domain QR42_05160 PF12705 PD-(D/E)XK nuclease superfamily QR42_05165 PF12320 Type 5 capsule protein repressor C-terminal domain QR42_05165 PF00149 Calcineurin-like phosphoesterase QR42_05170 PF13476 AAA domain QR42_05180 PF10676 Spore germination protein gerPA/gerPF QR42_05185 PF10970 Spore germination protein GerPE QR42_05195 PF10737 Spore germination protein GerPC QR42_05200 PF10803 Spore germination GerPB QR42_05205 PF10676 Spore germination protein gerPA/gerPF QR42_05215 PF08757 CotH kinase protein QR42_05220 PF01557 Fumarylacetoacetate (FAA) hydrolase family QR42_05225 PF07457 Protein of unknown function (DUF1516) QR42_05230 PF10949 Protein of unknown function (DUF2777) QR42_05235 PF13537 Glutamine amidotransferase domain QR42_05235 PF00733 Asparagine synthase QR42_05240 PF01593 Flavin containing amine oxidoreductase QR42_05255 PF01554 MatE QR42_05260 PF02311 AraC-like ligand binding domain QR42_05260 PF12833 Helix-turn-helix domain QR42_05285 PF00202 Aminotransferase class-III QR42_05290 PF00282 Pyridoxal-dependent decarboxylase conserved domain QR42_05295 PF04183 IucA / IucC family QR42_05295 PF06276 Ferric iron reductase FhuF-like transporter QR42_05305 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) QR42_05310 PF06276 Ferric iron reductase FhuF-like transporter QR42_05310 PF04183 IucA / IucC family QR42_05320 PF00809 Pterin binding enzyme QR42_05320 PF02607 B12 binding domain QR42_05320 PF02574 Homocysteine S-methyltransferase QR42_05320 PF02310 B12 binding domain QR42_05320 PF02965 Vitamin B12 dependent methionine synthase, activation domain QR42_05325 PF02574 Homocysteine S-methyltransferase QR42_05325 PF02219 Methylenetetrahydrofolate reductase QR42_05330 PF04461 Protein of unknown function (DUF520) QR42_05335 PF17783 CvfB-like winged helix domain QR42_05335 PF13509 S1 domain QR42_05345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_05345 PF00672 HAMP domain QR42_05345 PF02743 Cache domain QR42_05350 PF02645 Uncharacterised protein, DegV family COG1307 QR42_05355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) QR42_05355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 QR42_05360 PF12690 Intracellular proteinase inhibitor QR42_05365 PF12758 Protein of unknown function (DUF3813) QR42_05380 PF00326 Prolyl oligopeptidase family QR42_05385 PF01883 Iron-sulfur cluster assembly protein QR42_05390 PF01565 FAD binding domain QR42_05395 PF07690 Major Facilitator Superfamily QR42_05400 PF01118 Semialdehyde dehydrogenase, NAD binding domain QR42_05400 PF02774 Semialdehyde dehydrogenase, dimerisation domain QR42_05405 PF01960 ArgJ family QR42_05410 PF00696 Amino acid kinase family QR42_05415 PF00202 Aminotransferase class-III QR42_05420 PF00117 Glutamine amidotransferase class-I QR42_05420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain QR42_05425 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain QR42_05425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain QR42_05430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain QR42_05430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain QR42_05435 PF14168 YjzC-like protein QR42_05440 PF07690 Major Facilitator Superfamily QR42_05445 PF11151 Protein of unknown function (DUF2929) QR42_05460 PF02608 ABC transporter substrate-binding protein PnrA-like QR42_05465 PF10815 ComZ QR42_05475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal QR42_05475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III QR42_05480 PF02801 Beta-ketoacyl synthase, C-terminal domain QR42_05480 PF00109 Beta-ketoacyl synthase, N-terminal domain QR42_05485 PF10026 Predicted Zn-dependent protease (DUF2268) QR42_05490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_05490 PF00005 ABC transporter QR42_05495 PF00005 ABC transporter QR42_05495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_05500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QR42_05505 PF00528 Binding-protein-dependent transport system inner membrane component QR42_05510 PF12911 N-terminal TM domain of oligopeptide transport permease C QR42_05510 PF00528 Binding-protein-dependent transport system inner membrane component QR42_05515 PF12227 Protein of unknown function (DUF3603) QR42_05520 PF00579 tRNA synthetases class I (W and Y) QR42_05525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QR42_05530 PF00528 Binding-protein-dependent transport system inner membrane component QR42_05535 PF12911 N-terminal TM domain of oligopeptide transport permease C QR42_05535 PF00528 Binding-protein-dependent transport system inner membrane component QR42_05540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_05540 PF00005 ABC transporter QR42_05545 PF00005 ABC transporter QR42_05545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_05555 PF13508 Acetyltransferase (GNAT) domain QR42_05560 PF03960 ArsC family QR42_05565 PF03741 Integral membrane protein TerC family QR42_05570 PF05389 Negative regulator of genetic competence (MecA) QR42_05575 PF13091 PLD-like domain QR42_05575 PF13396 Phospholipase_D-nuclease N-terminal QR42_05585 PF01432 Peptidase family M3 QR42_05585 PF08439 Oligopeptidase F QR42_05600 PF01152 Bacterial-like globin QR42_05605 PF01464 Transglycosylase SLT domain QR42_05610 PF01928 CYTH domain QR42_05620 PF04607 Region found in RelA / SpoT proteins QR42_05625 PF01513 ATP-NAD kinase QR42_05630 PF00849 RNA pseudouridylate synthase QR42_05635 PF00149 Calcineurin-like phosphoesterase QR42_05640 PF00999 Sodium/hydrogen exchanger family QR42_05640 PF02254 TrkA-N domain QR42_05640 PF02080 TrkA-C domain QR42_05645 PF03070 TENA/THI-4/PQQC family QR42_05650 PF02581 Thiamine monophosphate synthase QR42_05655 PF01266 FAD dependent oxidoreductase QR42_05660 PF02597 ThiS family QR42_05665 PF05690 Thiazole biosynthesis protein ThiG QR42_05670 PF00899 ThiF family QR42_05675 PF08543 Phosphomethylpyrimidine kinase QR42_05685 PF14153 Spore coat protein CotO QR42_05690 PF10612 Spore coat protein Z QR42_05695 PF10612 Spore coat protein Z QR42_05700 PF07552 Spore Coat Protein X and V domain QR42_05710 PF07552 Spore Coat Protein X and V domain QR42_05715 PF07098 Protein of unknown function (DUF1360) QR42_05730 PF14069 Stage VI sporulation protein F QR42_05735 PF13361 UvrD-like helicase C-terminal domain QR42_05735 PF00580 UvrD/REP helicase N-terminal domain QR42_05745 PF13673 Acetyltransferase (GNAT) domain QR42_05755 PF00756 Putative esterase QR42_05760 PF01053 Cys/Met metabolism PLP-dependent enzyme QR42_05765 PF01053 Cys/Met metabolism PLP-dependent enzyme QR42_05780 PF00107 Zinc-binding dehydrogenase QR42_05780 PF08240 Alcohol dehydrogenase GroES-like domain QR42_05790 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit QR42_05800 PF00232 Glycosyl hydrolase family 1 QR42_05805 PF00582 Universal stress protein family QR42_05815 PF07690 Major Facilitator Superfamily QR42_05825 PF03466 LysR substrate binding domain QR42_05825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_05840 PF00302 Chloramphenicol acetyltransferase QR42_05845 PF13176 Tetratricopeptide repeat QR42_05845 PF18801 response regulator aspartate phosphatase H, N terminal QR42_05855 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues QR42_05855 PF04740 LXG domain of WXG superfamily QR42_05855 PF14449 Pre-toxin TG QR42_05860 PF18593 CdiI immunity protein QR42_05880 PF03466 LysR substrate binding domain QR42_05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_05885 PF07690 Major Facilitator Superfamily QR42_05890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QR42_05890 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_05905 PF18801 response regulator aspartate phosphatase H, N terminal QR42_05930 PF01168 Alanine racemase, N-terminal domain QR42_05930 PF00842 Alanine racemase, C-terminal domain QR42_05935 PF00107 Zinc-binding dehydrogenase QR42_05935 PF08240 Alcohol dehydrogenase GroES-like domain QR42_05950 PF00669 Bacterial flagellin N-terminal helical region QR42_05950 PF00700 Bacterial flagellin C-terminal helical region QR42_05955 PF00669 Bacterial flagellin N-terminal helical region QR42_05955 PF00700 Bacterial flagellin C-terminal helical region QR42_05960 PF00700 Bacterial flagellin C-terminal helical region QR42_05960 PF00669 Bacterial flagellin N-terminal helical region QR42_05965 PF01494 FAD binding domain QR42_05980 PF05908 Poly-gamma-glutamate hydrolase QR42_05985 PF06114 IrrE N-terminal-like domain QR42_05990 PF01510 N-acetylmuramoyl-L-alanine amidase QR42_05990 PF01476 LysM domain QR42_05990 PF01471 Putative peptidoglycan binding domain QR42_05995 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system QR42_06000 PF14171 Toxin SpoIISA, type II toxin-antitoxin system QR42_06005 PF01384 Phosphate transporter family QR42_06010 PF01865 Protein of unknown function DUF47 QR42_06030 PF00528 Binding-protein-dependent transport system inner membrane component QR42_06035 PF00528 Binding-protein-dependent transport system inner membrane component QR42_06050 PF03611 PTS system sugar-specific permease component QR42_06065 PF08240 Alcohol dehydrogenase GroES-like domain QR42_06065 PF00107 Zinc-binding dehydrogenase QR42_06070 PF00676 Dehydrogenase E1 component QR42_06075 PF02779 Transketolase, pyrimidine binding domain QR42_06075 PF00364 Biotin-requiring enzyme QR42_06075 PF02780 Transketolase, C-terminal domain QR42_06080 PF02817 e3 binding domain QR42_06080 PF00364 Biotin-requiring enzyme QR42_06080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) QR42_06085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QR42_06085 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_06100 PF04198 Putative sugar-binding domain QR42_06110 PF13520 Amino acid permease QR42_06115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QR42_06120 PF13180 PDZ domain QR42_06125 PF14748 Pyrroline-5-carboxylate reductase dimerisation QR42_06125 PF03807 NADP oxidoreductase coenzyme F420-dependent QR42_06130 PF04951 D-aminopeptidase QR42_06135 PF00528 Binding-protein-dependent transport system inner membrane component QR42_06140 PF00528 Binding-protein-dependent transport system inner membrane component QR42_06140 PF12911 N-terminal TM domain of oligopeptide transport permease C QR42_06145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_06145 PF00005 ABC transporter QR42_06150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QR42_06155 PF17676 LD-carboxypeptidase C-terminal domain QR42_06155 PF02016 LD-carboxypeptidase N-terminal domain QR42_06160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain QR42_06160 PF13378 Enolase C-terminal domain-like QR42_06165 PF00877 NlpC/P60 family QR42_06170 PF00005 ABC transporter QR42_06170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_06180 PF03061 Thioesterase superfamily QR42_06200 PF13302 Acetyltransferase (GNAT) domain QR42_06205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain QR42_06205 PF02805 Metal binding domain of Ada QR42_06205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain QR42_06205 PF12833 Helix-turn-helix domain QR42_06210 PF00893 Small Multidrug Resistance protein QR42_06215 PF00893 Small Multidrug Resistance protein QR42_06225 PF00551 Formyl transferase QR42_06225 PF01842 ACT domain QR42_06230 PF00696 Amino acid kinase family QR42_06230 PF01472 PUA domain QR42_06235 PF00171 Aldehyde dehydrogenase family QR42_06240 PF18801 response regulator aspartate phosphatase H, N terminal QR42_06250 PF02566 OsmC-like protein QR42_06255 PF01047 MarR family QR42_06260 PF02566 OsmC-like protein QR42_06265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region QR42_06270 PF01717 Cobalamin-independent synthase, Catalytic domain QR42_06270 PF08267 Cobalamin-independent synthase, N-terminal domain QR42_06275 PF00082 Subtilase family QR42_06290 PF00486 Transcriptional regulatory protein, C terminal QR42_06290 PF00072 Response regulator receiver domain QR42_06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_06295 PF00512 His Kinase A (phospho-acceptor) domain QR42_06295 PF00672 HAMP domain QR42_06300 PF03413 Peptidase propeptide and YPEB domain QR42_06305 PF03413 Peptidase propeptide and YPEB domain QR42_06310 PF00571 CBS domain QR42_06310 PF01769 Divalent cation transporter QR42_06310 PF03448 MgtE intracellular N domain QR42_06320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_06320 PF03466 LysR substrate binding domain QR42_06330 PF13411 MerR HTH family regulatory protein QR42_06340 PF01047 MarR family QR42_06345 PF00563 EAL domain QR42_06345 PF03707 Bacterial signalling protein N terminal repeat QR42_06345 PF00990 Diguanylate cyclase, GGDEF domain QR42_06350 PF09335 SNARE associated Golgi protein QR42_06355 PF03741 Integral membrane protein TerC family QR42_06360 PF04542 Sigma-70 region 2 QR42_06365 PF12791 Anti-sigma factor N-terminus QR42_06370 PF00269 Small, acid-soluble spore proteins, alpha/beta type QR42_06375 PF08876 Domain of unknown function (DUF1836) QR42_06380 PF01435 Peptidase family M48 QR42_06385 PF02386 Cation transport protein QR42_06390 PF04239 Protein of unknown function (DUF421) QR42_06395 PF01757 Acyltransferase family QR42_06400 PF13426 PAS domain QR42_06400 PF13188 PAS domain QR42_06400 PF00512 His Kinase A (phospho-acceptor) domain QR42_06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_06400 PF00989 PAS fold QR42_06405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain QR42_06405 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain QR42_06410 PF01008 Initiation factor 2 subunit family QR42_06415 PF01636 Phosphotransferase enzyme family QR42_06420 PF00155 Aminotransferase class I and II QR42_06425 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain QR42_06425 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain QR42_06435 PF00596 Class II Aldolase and Adducin N-terminal domain QR42_06440 PF03079 ARD/ARD' family QR42_06445 PF09388 Spo0E like sporulation regulatory protein QR42_06450 PF00512 His Kinase A (phospho-acceptor) domain QR42_06450 PF02743 Cache domain QR42_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_06455 PF01047 MarR family QR42_06460 PF13677 Membrane MotB of proton-channel complex MotA/MotB QR42_06460 PF00691 OmpA family QR42_06465 PF01618 MotA/TolQ/ExbB proton channel family QR42_06470 PF07724 AAA domain (Cdc48 subfamily) QR42_06470 PF17871 AAA lid domain QR42_06470 PF00004 ATPase family associated with various cellular activities (AAA) QR42_06470 PF10431 C-terminal, D2-small domain, of ClpB protein QR42_06480 PF06508 Queuosine biosynthesis protein QueC QR42_06485 PF01242 6-pyruvoyl tetrahydropterin synthase QR42_06490 PF04055 Radical SAM superfamily QR42_06495 PF14489 QueF-like protein QR42_06510 PF13302 Acetyltransferase (GNAT) domain QR42_06515 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) QR42_06525 PF07486 Cell Wall Hydrolase QR42_06530 PF01943 Polysaccharide biosynthesis protein QR42_06535 PF00578 AhpC/TSA family QR42_06545 PF01321 Creatinase/Prolidase N-terminal domain QR42_06545 PF00557 Metallopeptidase family M24 QR42_06550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family QR42_06550 PF00356 Bacterial regulatory proteins, lacI family QR42_06555 PF03123 CAT RNA binding domain QR42_06555 PF00874 PRD domain QR42_06560 PF00367 phosphotransferase system, EIIB QR42_06560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QR42_06560 PF02378 Phosphotransferase system, EIIC QR42_06565 PF00381 PTS HPr component phosphorylation site QR42_06570 PF05524 PEP-utilising enzyme, N-terminal QR42_06570 PF00391 PEP-utilising enzyme, mobile domain QR42_06570 PF02896 PEP-utilising enzyme, TIM barrel domain QR42_06575 PF11132 Transcriptional regulator protein (SplA) QR42_06585 PF02743 Cache domain QR42_06585 PF00672 HAMP domain QR42_06585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_06590 PF00106 short chain dehydrogenase QR42_06595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase QR42_06595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase QR42_06600 PF00188 Cysteine-rich secretory protein family QR42_06605 PF00905 Penicillin binding protein transpeptidase domain QR42_06605 PF03717 Penicillin-binding Protein dimerisation domain QR42_06610 PF08447 PAS fold QR42_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_06610 PF00989 PAS fold QR42_06610 PF00512 His Kinase A (phospho-acceptor) domain QR42_06615 PF00155 Aminotransferase class I and II QR42_06620 PF16916 Dimerisation domain of Zinc Transporter QR42_06620 PF01545 Cation efflux family QR42_06625 PF06271 RDD family QR42_06635 PF01584 CheW-like domain QR42_06635 PF00072 Response regulator receiver domain QR42_06640 PF14177 YkyB-like protein QR42_06645 PF12833 Helix-turn-helix domain QR42_06645 PF02311 AraC-like ligand binding domain QR42_06650 PF00892 EamA-like transporter family QR42_06660 PF07690 Major Facilitator Superfamily QR42_06665 PF03734 L,D-transpeptidase catalytic domain QR42_06665 PF01476 LysM domain QR42_06670 PF10518 TAT (twin-arginine translocation) pathway signal sequence QR42_06670 PF00149 Calcineurin-like phosphoesterase QR42_06680 PF00563 EAL domain QR42_06680 PF10388 EAL-domain associated signalling protein domain QR42_06685 PF05067 Manganese containing catalase QR42_06690 PF08796 Protein of unknown function (DUF1797) QR42_06695 PF04308 Ribonuclease H-like QR42_06700 PF14156 Antirepressor AbbA QR42_06710 PF03466 LysR substrate binding domain QR42_06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_06715 PF00258 Flavodoxin QR42_06725 PF00258 Flavodoxin QR42_06730 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal QR42_06730 PF00132 Bacterial transferase hexapeptide (six repeats) QR42_06730 PF14602 Hexapeptide repeat of succinyl-transferase QR42_06735 PF01546 Peptidase family M20/M25/M40 QR42_06735 PF07687 Peptidase dimerisation domain QR42_06740 PF03698 Uncharacterised protein family (UPF0180) QR42_06745 PF00924 Mechanosensitive ion channel QR42_06750 PF00578 AhpC/TSA family QR42_06750 PF10417 C-terminal domain of 1-Cys peroxiredoxin QR42_06755 PF00578 AhpC/TSA family QR42_06770 PF12804 MobA-like NTP transferase domain QR42_06775 PF00899 ThiF family QR42_06780 PF00994 Probable molybdopterin binding domain QR42_06780 PF03453 MoeA N-terminal region (domain I and II) QR42_06780 PF03454 MoeA C-terminal region (domain IV) QR42_06785 PF03205 Molybdopterin guanine dinucleotide synthesis protein B QR42_06790 PF02391 MoaE protein QR42_06795 PF02597 ThiS family QR42_06810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion QR42_06815 PF00005 ABC transporter QR42_06820 PF12704 MacB-like periplasmic core domain QR42_06820 PF02687 FtsX-like permease family QR42_06825 PF08220 DeoR-like helix-turn-helix domain QR42_06825 PF00455 DeoR C terminal sensor domain QR42_06830 PF00294 pfkB family carbohydrate kinase QR42_06835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_06835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_06840 PF10502 Signal peptidase, peptidase S26 QR42_06850 PF12848 ABC transporter QR42_06850 PF00005 ABC transporter QR42_06855 PF02073 Thermophilic metalloprotease (M29) QR42_06865 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin QR42_06865 PF18277 AbrB C-terminal domain QR42_06870 PF00989 PAS fold QR42_06870 PF00512 His Kinase A (phospho-acceptor) domain QR42_06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_06875 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like QR42_06880 PF02254 TrkA-N domain QR42_06880 PF02080 TrkA-C domain QR42_06885 PF13382 Adenine deaminase C-terminal domain QR42_06885 PF01979 Amidohydrolase family QR42_06890 PF17770 Ribonuclease J C-terminal domain QR42_06890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain QR42_06890 PF00753 Metallo-beta-lactamase superfamily QR42_06905 PF01327 Polypeptide deformylase QR42_06920 PF00676 Dehydrogenase E1 component QR42_06925 PF02779 Transketolase, pyrimidine binding domain QR42_06925 PF02780 Transketolase, C-terminal domain QR42_06930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) QR42_06930 PF00364 Biotin-requiring enzyme QR42_06930 PF02817 e3 binding domain QR42_06935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QR42_06935 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_06950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain QR42_06950 PF01276 Orn/Lys/Arg decarboxylase, major domain QR42_06955 PF05256 Uncharacterised protein family (UPF0223) QR42_06960 PF06335 Protein of unknown function (DUF1054) QR42_06970 PF00459 Inositol monophosphatase family QR42_06985 PF08281 Sigma-70, region 4 QR42_06985 PF04542 Sigma-70 region 2 QR42_06990 PF13490 Putative zinc-finger QR42_07010 PF14036 YlaH-like protein QR42_07015 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) QR42_07020 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) QR42_07025 PF13638 PIN domain QR42_07025 PF02562 PhoH-like protein QR42_07035 PF04960 Glutaminase QR42_07040 PF07408 Protein of unknown function (DUF1507) QR42_07045 PF01098 Cell cycle protein QR42_07050 PF02436 Conserved carboxylase domain QR42_07050 PF00682 HMGL-like QR42_07050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain QR42_07050 PF00364 Biotin-requiring enzyme QR42_07050 PF00289 Biotin carboxylase, N-terminal domain QR42_07050 PF02785 Biotin carboxylase C-terminal domain QR42_07060 PF02628 Cytochrome oxidase assembly protein QR42_07065 PF01040 UbiA prenyltransferase family QR42_07070 PF02790 Cytochrome C oxidase subunit II, transmembrane domain QR42_07070 PF00034 Cytochrome c QR42_07070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain QR42_07075 PF00115 Cytochrome C and Quinol oxidase polypeptide I QR42_07080 PF00510 Cytochrome c oxidase subunit III QR42_07085 PF03626 Prokaryotic Cytochrome C oxidase subunit IV QR42_07090 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) QR42_07095 PF08868 YugN-like family QR42_07100 PF00571 CBS domain QR42_07105 PF00188 Cysteine-rich secretory protein family QR42_07105 PF14504 CAP-associated N-terminal QR42_07110 PF14071 Putative coat protein QR42_07115 PF14003 YlbE-like protein QR42_07125 PF06133 Control of competence regulator ComK, YlbF/YmcA QR42_07130 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) QR42_07140 PF01467 Cytidylyltransferase-like QR42_07145 PF07670 Nucleoside recognition QR42_07150 PF01734 Patatin-like phospholipase QR42_07155 PF13180 PDZ domain QR42_07155 PF05362 Lon protease (S16) C-terminal proteolytic domain QR42_07160 PF05636 HIGH Nucleotidyl Transferase QR42_07165 PF02620 Large ribosomal RNA subunit accumulation protein YceD QR42_07170 PF01783 Ribosomal L32p protein family QR42_07180 PF00583 Acetyltransferase (GNAT) family QR42_07185 PF02558 Ketopantoate reductase PanE/ApbA QR42_07185 PF08546 Ketopantoate reductase PanE/ApbA C terminal QR42_07190 PF10079 Bacillithiol biosynthesis BshC QR42_07195 PF02381 MraZ protein, putative antitoxin-like QR42_07200 PF01795 MraW methylase family QR42_07215 PF00905 Penicillin binding protein transpeptidase domain QR42_07215 PF03717 Penicillin-binding Protein dimerisation domain QR42_07215 PF03793 PASTA domain QR42_07220 PF08245 Mur ligase middle domain QR42_07220 PF02875 Mur ligase family, glutamate ligase domain QR42_07220 PF01225 Mur ligase family, catalytic domain QR42_07225 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 QR42_07225 PF00953 Glycosyl transferase family 4 QR42_07230 PF08245 Mur ligase middle domain QR42_07230 PF02875 Mur ligase family, glutamate ligase domain QR42_07235 PF01098 Cell cycle protein QR42_07240 PF04101 Glycosyltransferase family 28 C-terminal domain QR42_07240 PF03033 Glycosyltransferase family 28 N-terminal domain QR42_07245 PF01565 FAD binding domain QR42_07245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain QR42_07250 PF08478 POTRA domain, FtsQ-type QR42_07255 PF05949 Bacterial protein of unknown function (DUF881) QR42_07260 PF05949 Bacterial protein of unknown function (DUF881) QR42_07265 PF06947 Protein of unknown function (DUF1290) QR42_07270 PF02491 SHS2 domain inserted in FTSA QR42_07275 PF12327 FtsZ family, C-terminal domain QR42_07275 PF00091 Tubulin/FtsZ family, GTPase domain QR42_07280 PF05922 Peptidase inhibitor I9 QR42_07280 PF00082 Subtilase family QR42_07285 PF03419 Sporulation factor SpoIIGA QR42_07290 PF04545 Sigma-70, region 4 QR42_07290 PF04542 Sigma-70 region 2 QR42_07295 PF04542 Sigma-70 region 2 QR42_07295 PF04539 Sigma-70 region 3 QR42_07295 PF04545 Sigma-70, region 4 QR42_07300 PF04198 Putative sugar-binding domain QR42_07315 PF03608 PTS system enzyme II sorbitol-specific factor QR42_07320 PF07663 Sorbitol phosphotransferase enzyme II C-terminus QR42_07320 PF03612 Sorbitol phosphotransferase enzyme II N-terminus QR42_07325 PF03829 PTS system glucitol/sorbitol-specific IIA component QR42_07330 PF00005 ABC transporter QR42_07335 PF05239 PRC-barrel domain QR42_07345 PF01168 Alanine racemase, N-terminal domain QR42_07350 PF04472 Cell division protein SepF QR42_07355 PF02325 YGGT family QR42_07360 PF17774 Putative RNA-binding domain in YlmH QR42_07360 PF01479 S4 domain QR42_07365 PF05103 DivIVA protein QR42_07370 PF00133 tRNA synthetases class I (I, L, M and V) QR42_07370 PF08264 Anticodon-binding domain of tRNA QR42_07375 PF01258 Prokaryotic dksA/traR C4-type zinc finger QR42_07380 PF01252 Signal peptidase (SPase) II QR42_07385 PF01479 S4 domain QR42_07385 PF00849 RNA pseudouridylate synthase QR42_07390 PF00156 Phosphoribosyl transferase domain QR42_07395 PF00860 Permease family QR42_07400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain QR42_07400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain QR42_07405 PF01979 Amidohydrolase family QR42_07410 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain QR42_07410 PF00117 Glutamine amidotransferase class-I QR42_07415 PF02142 MGS-like domain QR42_07415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain QR42_07415 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain QR42_07420 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B QR42_07425 PF01180 Dihydroorotate dehydrogenase QR42_07430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family QR42_07435 PF00156 Phosphoribosyl transferase domain QR42_07440 PF01507 Phosphoadenosine phosphosulfate reductase family QR42_07445 PF01384 Phosphate transporter family QR42_07450 PF01747 ATP-sulfurylase QR42_07450 PF14306 PUA-like domain QR42_07460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases QR42_07465 PF01903 CbiX QR42_07480 PF00689 Cation transporting ATPase, C-terminus QR42_07480 PF00690 Cation transporter/ATPase, N-terminus QR42_07485 PF03755 YicC-like family, N-terminal region QR42_07485 PF08340 Domain of unknown function (DUF1732) QR42_07490 PF04025 Domain of unknown function (DUF370) QR42_07495 PF00625 Guanylate kinase QR42_07500 PF01192 RNA polymerase Rpb6 QR42_07505 PF04127 DNA / pantothenate metabolism flavoprotein QR42_07505 PF02441 Flavoprotein QR42_07510 PF00271 Helicase conserved C-terminal domain QR42_07510 PF04851 Type III restriction enzyme, res subunit QR42_07510 PF17764 3′ DNA-binding domain (3′BD) QR42_07510 PF18074 Primosomal protein N C-terminal domain QR42_07510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain QR42_07515 PF01327 Polypeptide deformylase QR42_07520 PF02911 Formyl transferase, C-terminal domain QR42_07520 PF00551 Formyl transferase QR42_07525 PF01029 NusB family QR42_07525 PF01189 16S rRNA methyltransferase RsmB/F QR42_07530 PF04055 Radical SAM superfamily QR42_07540 PF03793 PASTA domain QR42_07540 PF00069 Protein kinase domain QR42_07545 PF16745 RsgA N-terminal domain QR42_07545 PF03193 RsgA GTPase QR42_07550 PF00834 Ribulose-phosphate 3 epimerase family QR42_07555 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain QR42_07555 PF04263 Thiamin pyrophosphokinase, catalytic domain QR42_07560 PF08183 Stage V sporulation protein family QR42_07565 PF00830 Ribosomal L28 family QR42_07570 PF03780 Asp23 family, cell envelope-related function QR42_07575 PF02734 DAK2 domain QR42_07575 PF13684 Dihydroxyacetone kinase family QR42_07580 PF01842 ACT domain QR42_07580 PF03315 Serine dehydratase beta chain QR42_07585 PF03313 Serine dehydratase alpha chain QR42_07590 PF00270 DEAD/DEAH box helicase QR42_07590 PF00271 Helicase conserved C-terminal domain QR42_07590 PF17191 RecG wedge domain QR42_07600 PF02504 Fatty acid synthesis protein QR42_07605 PF00698 Acyl transferase domain QR42_07615 PF00550 Phosphopantetheine attachment site QR42_07620 PF14622 Ribonuclease-III-like QR42_07620 PF00035 Double-stranded RNA binding motif QR42_07625 PF06470 SMC proteins Flexible Hinge Domain QR42_07625 PF02463 RecF/RecN/SMC N terminal domain QR42_07630 PF02881 SRP54-type protein, helical bundle domain QR42_07630 PF00448 SRP54-type protein, GTPase domain QR42_07635 PF04297 Putative helix-turn-helix protein, YlxM / p13 like QR42_07640 PF02978 Signal peptide binding domain QR42_07640 PF02881 SRP54-type protein, helical bundle domain QR42_07640 PF00448 SRP54-type protein, GTPase domain QR42_07645 PF00886 Ribosomal protein S16 QR42_07655 PF11068 YlqD protein QR42_07660 PF05239 PRC-barrel domain QR42_07660 PF01782 RimM N-terminal domain QR42_07665 PF01746 tRNA (Guanine-1)-methyltransferase QR42_07670 PF01245 Ribosomal protein L19 QR42_07675 PF01926 50S ribosome-binding GTPase QR42_07680 PF01351 Ribonuclease HII QR42_07690 PF01312 FlhB HrpN YscU SpaS Family QR42_07695 PF08442 ATP-grasp domain QR42_07695 PF00549 CoA-ligase QR42_07700 PF00549 CoA-ligase QR42_07700 PF02629 CoA binding domain QR42_07705 PF02481 DNA recombination-mediator protein A QR42_07710 PF01396 Topoisomerase DNA binding C4 zinc finger QR42_07710 PF01751 Toprim domain QR42_07710 PF01131 DNA topoisomerase QR42_07715 PF01134 Glucose inhibited division protein A QR42_07720 PF00589 Phage integrase family QR42_07720 PF02899 Phage integrase, N-terminal SAM-like domain QR42_07725 PF00227 Proteasome subunit QR42_07730 PF00004 ATPase family associated with various cellular activities (AAA) QR42_07730 PF07724 AAA domain (Cdc48 subfamily) QR42_07730 PF10431 C-terminal, D2-small domain, of ClpB protein QR42_07735 PF06018 CodY GAF-like domain QR42_07735 PF08222 CodY helix-turn-helix domain QR42_07740 PF00460 Flagella basal body rod protein QR42_07745 PF00460 Flagella basal body rod protein QR42_07745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QR42_07750 PF02049 Flagellar hook-basal body complex protein FliE QR42_07755 PF08345 Flagellar M-ring protein C-terminal QR42_07755 PF01514 Secretory protein of YscJ/FliF family QR42_07760 PF01706 FliG C-terminal domain QR42_07760 PF14842 FliG N-terminal domain QR42_07760 PF14841 FliG middle domain QR42_07765 PF02108 Flagellar assembly protein FliH QR42_07770 PF18269 T3SS EscN ATPase C-terminal domain QR42_07770 PF02874 ATP synthase alpha/beta family, beta-barrel domain QR42_07770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QR42_07775 PF02050 Flagellar FliJ protein QR42_07780 PF03448 MgtE intracellular N domain QR42_07785 PF02120 Flagellar hook-length control protein FliK QR42_07790 PF03963 Flagellar hook capping protein - N-terminal region QR42_07795 PF00460 Flagella basal body rod protein QR42_07795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QR42_07800 PF06289 Flagellar and Swarming motility proteins QR42_07805 PF03748 Flagellar basal body-associated protein FliL QR42_07810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term QR42_07810 PF02154 Flagellar motor switch protein FliM QR42_07815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term QR42_07815 PF04509 CheC-like family QR42_07820 PF00072 Response regulator receiver domain QR42_07825 PF04347 Flagellar biosynthesis protein, FliO QR42_07830 PF00813 FliP family QR42_07835 PF01313 Bacterial export proteins, family 3 QR42_07840 PF01311 Bacterial export proteins, family 1 QR42_07845 PF01312 FlhB HrpN YscU SpaS Family QR42_07850 PF00771 FHIPEP family QR42_07855 PF00448 SRP54-type protein, GTPase domain QR42_07860 PF10609 NUBPL iron-transfer P-loop NTPase QR42_07865 PF00072 Response regulator receiver domain QR42_07865 PF01339 CheB methylesterase QR42_07870 PF07194 P2 response regulator binding domain QR42_07870 PF01627 Hpt domain QR42_07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_07870 PF02895 Signal transducing histidine kinase, homodimeric domain QR42_07870 PF01584 CheW-like domain QR42_07875 PF01584 CheW-like domain QR42_07880 PF04509 CheC-like family QR42_07885 PF03975 CheD chemotactic sensory transduction QR42_07890 PF04542 Sigma-70 region 2 QR42_07890 PF04539 Sigma-70 region 3 QR42_07890 PF04545 Sigma-70, region 4 QR42_07900 PF00318 Ribosomal protein S2 QR42_07905 PF00889 Elongation factor TS QR42_07910 PF00696 Amino acid kinase family QR42_07915 PF01765 Ribosome recycling factor QR42_07920 PF01255 Putative undecaprenyl diphosphate synthase QR42_07930 PF13288 DXP reductoisomerase C-terminal domain QR42_07930 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase QR42_07930 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain QR42_07935 PF02163 Peptidase family M50 QR42_07935 PF17820 PDZ domain QR42_07940 PF03129 Anticodon binding domain QR42_07940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QR42_07940 PF04073 Aminoacyl-tRNA editing domain QR42_07945 PF00929 Exonuclease QR42_07945 PF02811 PHP domain QR42_07945 PF14480 DNA polymerase III polC-type N-terminus I QR42_07945 PF14579 Helix-hairpin-helix motif QR42_07945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain QR42_07945 PF07733 Bacterial DNA polymerase III alpha NTPase domain QR42_07945 PF11490 DNA polymerase III polC-type N-terminus II QR42_07950 PF00942 Cellulose binding domain QR42_07950 PF00759 Glycosyl hydrolase family 9 QR42_07955 PF00942 Cellulose binding domain QR42_07955 PF00759 Glycosyl hydrolase family 9 QR42_07955 PF02011 Glycosyl hydrolase family 48 QR42_07980 PF00005 ABC transporter QR42_08010 PF00881 Nitroreductase family QR42_08025 PF02576 RimP N-terminal domain QR42_08025 PF17384 RimP C-terminal SH3 domain QR42_08030 PF00575 S1 RNA binding domain QR42_08030 PF08529 NusA N-terminal domain QR42_08030 PF13184 NusA-like KH domain QR42_08035 PF04296 Protein of unknown function (DUF448) QR42_08040 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family QR42_08045 PF00009 Elongation factor Tu GTP binding domain QR42_08045 PF11987 Translation-initiation factor 2 QR42_08045 PF04760 Translation initiation factor IF-2, N-terminal region QR42_08050 PF04456 Protein of unknown function (DUF503) QR42_08055 PF02033 Ribosome-binding factor A QR42_08060 PF16198 tRNA pseudouridylate synthase B C-terminal domain QR42_08060 PF01509 TruB family pseudouridylate synthase (N terminal domain) QR42_08065 PF06574 FAD synthetase QR42_08065 PF01687 Riboflavin kinase QR42_08070 PF00312 Ribosomal protein S15 QR42_08075 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain QR42_08075 PF00575 S1 RNA binding domain QR42_08075 PF01138 3' exoribonuclease family, domain 1 QR42_08075 PF00013 KH domain QR42_08075 PF03725 3' exoribonuclease family, domain 2 QR42_08080 PF01522 Polysaccharide deacetylase QR42_08085 PF00675 Insulinase (Peptidase family M16) QR42_08085 PF05193 Peptidase M16 inactive domain QR42_08095 PF05239 PRC-barrel domain QR42_08100 PF01262 Alanine dehydrogenase/PNT, C-terminal domain QR42_08100 PF16924 Dipicolinate synthase subunit A N-terminal domain QR42_08105 PF02441 Flavoprotein QR42_08110 PF01118 Semialdehyde dehydrogenase, NAD binding domain QR42_08110 PF02774 Semialdehyde dehydrogenase, dimerisation domain QR42_08115 PF00696 Amino acid kinase family QR42_08115 PF13840 ACT domain QR42_08120 PF00701 Dihydrodipicolinate synthetase family QR42_08125 PF17770 Ribonuclease J C-terminal domain QR42_08125 PF00753 Metallo-beta-lactamase superfamily QR42_08125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain QR42_08130 PF00574 Clp protease QR42_08135 PF14035 YlzJ-like protein QR42_08140 PF17854 FtsK alpha domain QR42_08140 PF09397 Ftsk gamma domain QR42_08140 PF01580 FtsK/SpoIIIE family QR42_08145 PF00392 Bacterial regulatory proteins, gntR family QR42_08145 PF07702 UTRA domain QR42_08150 PF07690 Major Facilitator Superfamily QR42_08155 PF03176 MMPL family QR42_08160 PF05193 Peptidase M16 inactive domain QR42_08165 PF05193 Peptidase M16 inactive domain QR42_08165 PF00675 Insulinase (Peptidase family M16) QR42_08175 PF03176 MMPL family QR42_08185 PF11588 Protein of unknown function (DUF3243) QR42_08190 PF11868 Protein of unknown function (DUF3388) QR42_08195 PF13464 Domain of unknown function (DUF4115) QR42_08200 PF01066 CDP-alcohol phosphatidyltransferase QR42_08205 PF02464 Competence-damaged protein QR42_08205 PF18146 Damage-inducible protein CinA KH domain QR42_08205 PF00994 Probable molybdopterin binding domain QR42_08210 PF00154 recA bacterial DNA recombination protein QR42_08215 PF00144 Beta-lactamase QR42_08220 PF12072 Domain of unknown function (DUF3552) QR42_08220 PF01966 HD domain QR42_08220 PF00013 KH domain QR42_08225 PF13277 YmdB-like protein QR42_08230 PF04232 Stage V sporulation protein S (SpoVS) QR42_08235 PF00873 AcrB/AcrD/AcrF family QR42_08240 PF08240 Alcohol dehydrogenase GroES-like domain QR42_08240 PF00107 Zinc-binding dehydrogenase QR42_08245 PF00155 Aminotransferase class I and II QR42_08250 PF04055 Radical SAM superfamily QR42_08250 PF00919 Uncharacterized protein family UPF0004 QR42_08250 PF01938 TRAM domain QR42_08255 PF06133 Control of competence regulator ComK, YlbF/YmcA QR42_08260 PF10628 Outer spore coat protein E (CotE) QR42_08265 PF05190 MutS family domain IV QR42_08265 PF05188 MutS domain II QR42_08265 PF01624 MutS domain I QR42_08265 PF00488 MutS domain V QR42_08265 PF05192 MutS domain III QR42_08270 PF08676 MutL C terminal dimerisation domain QR42_08270 PF01119 DNA mismatch repair protein, C-terminal domain QR42_08275 PF17735 Biofilm surface layer A QR42_08290 PF02559 CarD-like/TRCF domain QR42_08295 PF05908 Poly-gamma-glutamate hydrolase QR42_08300 PF18801 response regulator aspartate phosphatase H, N terminal QR42_08305 PF00082 Subtilase family QR42_08310 PF05908 Poly-gamma-glutamate hydrolase QR42_08315 PF02566 OsmC-like protein QR42_08320 PF00893 Small Multidrug Resistance protein QR42_08325 PF00893 Small Multidrug Resistance protein QR42_08335 PF12788 YmaF family QR42_08345 PF17209 Hfq protein QR42_08360 PF07972 NrdI Flavodoxin like QR42_08365 PF02867 Ribonucleotide reductase, barrel domain QR42_08365 PF00317 Ribonucleotide reductase, all-alpha domain QR42_08365 PF08343 Ribonucleotide reductase N-terminal QR42_08370 PF00268 Ribonucleotide reductase, small chain QR42_08380 PF05036 Sporulation related domain QR42_08380 PF01520 N-acetylmuramoyl-L-alanine amidase QR42_08385 PF17866 AAA lid domain QR42_08385 PF00004 ATPase family associated with various cellular activities (AAA) QR42_08390 PF16360 GTP-binding GTPase Middle Region QR42_08390 PF01926 50S ribosome-binding GTPase QR42_08390 PF13167 GTP-binding GTPase N-terminal QR42_08395 PF06838 Methionine gamma-lyase QR42_08400 PF13411 MerR HTH family regulatory protein QR42_08405 PF00120 Glutamine synthetase, catalytic domain QR42_08405 PF03951 Glutamine synthetase, beta-Grasp domain QR42_08475 PF18801 response regulator aspartate phosphatase H, N terminal QR42_08480 PF04740 LXG domain of WXG superfamily QR42_08505 PF08818 Domain of unknown function (DU1801) QR42_08510 PF18801 response regulator aspartate phosphatase H, N terminal QR42_08515 PF06912 Protein of unknown function (DUF1275) QR42_08520 PF01068 ATP dependent DNA ligase domain QR42_08525 PF02735 Ku70/Ku80 beta-barrel domain QR42_08530 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) QR42_08540 PF02082 Transcriptional regulator QR42_08545 PF05368 NmrA-like family QR42_08550 PF02754 Cysteine-rich domain QR42_08555 PF02589 LUD domain QR42_08555 PF13183 4Fe-4S dicluster domain QR42_08555 PF11870 Domain of unknown function (DUF3390) QR42_08560 PF02589 LUD domain QR42_08580 PF04239 Protein of unknown function (DUF421) QR42_08585 PF16295 Tetracyclin repressor-like, C-terminal domain QR42_08585 PF00440 Bacterial regulatory proteins, tetR family QR42_08590 PF00067 Cytochrome P450 QR42_08590 PF00258 Flavodoxin QR42_08590 PF00667 FAD binding domain QR42_08590 PF00175 Oxidoreductase NAD-binding domain QR42_08595 PF00089 Trypsin QR42_08600 PF14040 Deoxyribonuclease NucA/NucB QR42_08605 PF01740 STAS domain QR42_08610 PF16800 IseA DL-endopeptidase inhibitor QR42_08620 PF01726 LexA DNA binding domain QR42_08620 PF00717 Peptidase S24-like QR42_08625 PF01476 LysM domain QR42_08630 PF00239 Resolvase, N terminal domain QR42_08635 PF05979 Bacterial protein of unknown function (DUF896) QR42_08640 PF02779 Transketolase, pyrimidine binding domain QR42_08640 PF02780 Transketolase, C-terminal domain QR42_08640 PF00456 Transketolase, thiamine diphosphate binding domain QR42_08645 PF10747 Sporulation inhibitor of replication protein SirA QR42_08650 PF03672 Uncharacterised protein family (UPF0154) QR42_08655 PF09388 Spo0E like sporulation regulatory protein QR42_08660 PF02683 Cytochrome C biogenesis protein transmembrane region QR42_08665 PF07301 Protein of unknown function (DUF1453) QR42_08670 PF11084 Protein of unknown function (DUF2621) QR42_08680 PF08179 Small acid-soluble spore protein P family QR42_08690 PF00694 Aconitase C-terminal domain QR42_08690 PF00330 Aconitase family (aconitate hydratase) QR42_08695 PF00578 AhpC/TSA family QR42_08700 PF13040 Fur-regulated basic protein B QR42_08705 PF08177 Small acid-soluble spore protein N family QR42_08715 PF03061 Thioesterase superfamily QR42_08725 PF01521 Iron-sulphur cluster biosynthesis QR42_08730 PF02660 Glycerol-3-phosphate acyltransferase QR42_08735 PF13380 CoA binding domain QR42_08740 PF00986 DNA gyrase B subunit, carboxyl terminus QR42_08740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_08740 PF01751 Toprim domain QR42_08740 PF00204 DNA gyrase B QR42_08745 PF03989 DNA gyrase C-terminal domain, beta-propeller QR42_08745 PF00521 DNA gyrase/topoisomerase IV, subunit A QR42_08755 PF07690 Major Facilitator Superfamily QR42_08760 PF02525 Flavodoxin-like fold QR42_08765 PF01638 HxlR-like helix-turn-helix QR42_08775 PF00291 Pyridoxal-phosphate dependent enzyme QR42_08780 PF01042 Endoribonuclease L-PSP QR42_08790 PF00440 Bacterial regulatory proteins, tetR family QR42_08795 PF01494 FAD binding domain QR42_08810 PF12802 MarR family QR42_08825 PF08803 Putative mono-oxygenase ydhR QR42_08830 PF00795 Carbon-nitrogen hydrolase QR42_08835 PF03466 LysR substrate binding domain QR42_08835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_08850 PF07859 alpha/beta hydrolase fold QR42_08850 PF00934 PE family QR42_08855 PF13411 MerR HTH family regulatory protein QR42_08860 PF00232 Glycosyl hydrolase family 1 QR42_08865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QR42_08865 PF02378 Phosphotransferase system, EIIC QR42_08865 PF00367 phosphotransferase system, EIIB QR42_08870 PF03123 CAT RNA binding domain QR42_08870 PF00874 PRD domain QR42_08880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_08880 PF00512 His Kinase A (phospho-acceptor) domain QR42_08885 PF00072 Response regulator receiver domain QR42_08885 PF00486 Transcriptional regulatory protein, C terminal QR42_08890 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain QR42_08890 PF17189 Glycosyl hydrolase family 30 beta sandwich domain QR42_08895 PF03422 Carbohydrate binding module (family 6) QR42_08895 PF04616 Glycosyl hydrolases family 43 QR42_08900 PF00171 Aldehyde dehydrogenase family QR42_08905 PF02056 Family 4 glycosyl hydrolase QR42_08905 PF11975 Family 4 glycosyl hydrolase C-terminal domain QR42_08930 PF00834 Ribulose-phosphate 3 epimerase family QR42_08945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_08950 PF03466 LysR substrate binding domain QR42_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_08955 PF14537 Cytochrome c3 QR42_08955 PF00890 FAD binding domain QR42_08985 PF01047 MarR family QR42_08990 PF07690 Major Facilitator Superfamily QR42_08995 PF01116 Fructose-bisphosphate aldolase class-II QR42_09000 PF02378 Phosphotransferase system, EIIC QR42_09000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_09000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_09005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_09005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_09010 PF00294 pfkB family carbohydrate kinase QR42_09015 PF01380 SIS domain QR42_09015 PF01418 Helix-turn-helix domain, rpiR family QR42_09020 PF13091 PLD-like domain QR42_09040 PF00171 Aldehyde dehydrogenase family QR42_09050 PF00667 FAD binding domain QR42_09050 PF00258 Flavodoxin QR42_09050 PF00175 Oxidoreductase NAD-binding domain QR42_09055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain QR42_09055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain QR42_09060 PF13193 AMP-binding enzyme C-terminal domain QR42_09060 PF00501 AMP-binding enzyme QR42_09060 PF16177 Acetyl-coenzyme A synthetase N-terminus QR42_09065 PF01039 Carboxyl transferase domain QR42_09070 PF00378 Enoyl-CoA hydratase/isomerase QR42_09075 PF00682 HMGL-like QR42_09080 PF00364 Biotin-requiring enzyme QR42_09085 PF02785 Biotin carboxylase C-terminal domain QR42_09085 PF00289 Biotin carboxylase, N-terminal domain QR42_09085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain QR42_09090 PF13193 AMP-binding enzyme C-terminal domain QR42_09090 PF00501 AMP-binding enzyme QR42_09095 PF02770 Acyl-CoA dehydrogenase, middle domain QR42_09095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain QR42_09095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain QR42_09100 PF02638 Glycosyl hydrolase-like 10 QR42_09110 PF00455 DeoR C terminal sensor domain QR42_09110 PF08220 DeoR-like helix-turn-helix domain QR42_09120 PF13556 PucR C-terminal helix-turn-helix domain QR42_09120 PF17853 GGDEF-like domain QR42_09120 PF05651 Putative sugar diacid recognition QR42_09125 PF01565 FAD binding domain QR42_09125 PF02913 FAD linked oxidases, C-terminal domain QR42_09130 PF02754 Cysteine-rich domain QR42_09130 PF13183 4Fe-4S dicluster domain QR42_09135 PF03323 Bacillus/Clostridium GerA spore germination protein QR42_09140 PF03845 Spore germination protein QR42_09155 PF12728 Helix-turn-helix domain QR42_09160 PF09335 SNARE associated Golgi protein QR42_09165 PF02602 Uroporphyrinogen-III synthase HemD QR42_09175 PF00296 Luciferase-like monooxygenase QR42_09220 PF01554 MatE QR42_09225 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family QR42_09230 PF01095 Pectinesterase QR42_09235 PF04239 Protein of unknown function (DUF421) QR42_09240 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_09240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster QR42_09245 PF01493 GXGXG motif QR42_09245 PF01645 Conserved region in glutamate synthase QR42_09245 PF00310 Glutamine amidotransferases class-II QR42_09245 PF04898 Glutamate synthase central domain QR42_09250 PF03466 LysR substrate binding domain QR42_09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_09255 PF00005 ABC transporter QR42_09255 PF00664 ABC transporter transmembrane region QR42_09260 PF00005 ABC transporter QR42_09260 PF00664 ABC transporter transmembrane region QR42_09265 PF06445 GyrI-like small molecule binding domain QR42_09265 PF13411 MerR HTH family regulatory protein QR42_09270 PF00583 Acetyltransferase (GNAT) family QR42_09275 PF00171 Aldehyde dehydrogenase family QR42_09280 PF00696 Amino acid kinase family QR42_09280 PF01472 PUA domain QR42_09285 PF03807 NADP oxidoreductase coenzyme F420-dependent QR42_09285 PF14748 Pyrroline-5-carboxylate reductase dimerisation QR42_09290 PF00067 Cytochrome P450 QR42_09295 PF01568 Molydopterin dinucleotide binding domain QR42_09295 PF00384 Molybdopterin oxidoreductase QR42_09295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain QR42_09300 PF00457 Glycosyl hydrolases family 11 QR42_09305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain QR42_09305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain QR42_09310 PF01261 Xylose isomerase-like TIM barrel QR42_09315 PF00480 ROK family QR42_09320 PF04616 Glycosyl hydrolases family 43 QR42_09320 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain QR42_09330 PF01588 Putative tRNA binding domain QR42_09340 PF14158 YndJ-like protein QR42_09345 PF13761 Domain of unknown function (DUF4166) QR42_09355 PF13305 Tetracyclin repressor-like, C-terminal domain QR42_09355 PF00440 Bacterial regulatory proteins, tetR family QR42_09360 PF00753 Metallo-beta-lactamase superfamily QR42_09365 PF06445 GyrI-like small molecule binding domain QR42_09370 PF08279 HTH domain QR42_09370 PF13280 WYL domain QR42_09380 PF01022 Bacterial regulatory protein, arsR family QR42_09385 PF00324 Amino acid permease QR42_09400 PF03972 MmgE/PrpD family QR42_09405 PF00285 Citrate synthase, C-terminal domain QR42_09410 PF04238 Protein of unknown function (DUF420) QR42_09420 PF06725 3D domain QR42_09420 PF01476 LysM domain QR42_09425 PF00570 HRDC domain QR42_09425 PF00271 Helicase conserved C-terminal domain QR42_09425 PF00270 DEAD/DEAH box helicase QR42_09425 PF09382 RQC domain QR42_09425 PF16124 RecQ zinc-binding QR42_09430 PF01258 Prokaryotic dksA/traR C4-type zinc finger QR42_09440 PF08000 Bacterial PH domain QR42_09450 PF00171 Aldehyde dehydrogenase family QR42_09455 PF13249 Squalene-hopene cyclase N-terminal domain QR42_09455 PF13243 Squalene-hopene cyclase C-terminal domain QR42_09460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain QR42_09460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain QR42_09465 PF01758 Sodium Bile acid symporter family QR42_09470 PF00364 Biotin-requiring enzyme QR42_09470 PF02817 e3 binding domain QR42_09470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) QR42_09475 PF16078 2-oxoglutarate dehydrogenase N-terminus QR42_09475 PF02779 Transketolase, pyrimidine binding domain QR42_09475 PF00676 Dehydrogenase E1 component QR42_09475 PF16870 2-oxoglutarate dehydrogenase C-terminal QR42_09480 PF00092 von Willebrand factor type A domain QR42_09485 PF07728 AAA domain (dynein-related subfamily) QR42_09490 PF00080 Copper/zinc superoxide dismutase (SODC) QR42_09490 PF13627 Prokaryotic lipoprotein-attachment site QR42_09495 PF00877 NlpC/P60 family QR42_09495 PF01476 LysM domain QR42_09500 PF02457 DisA bacterial checkpoint controller nucleotide-binding QR42_09500 PF10372 Bacterial membrane-spanning protein N-terminus QR42_09505 PF01554 MatE QR42_09510 PF02585 GlcNAc-PI de-N-acetylase QR42_09515 PF08830 Protein of unknown function (DUF1806) QR42_09525 PF00892 EamA-like transporter family QR42_09540 PF01638 HxlR-like helix-turn-helix QR42_09545 PF00881 Nitroreductase family QR42_09550 PF11755 Protein of unknown function (DUF3311) QR42_09555 PF00474 Sodium:solute symporter family QR42_09560 PF04072 Leucine carboxyl methyltransferase QR42_09565 PF17820 PDZ domain QR42_09565 PF03572 Peptidase family S41 QR42_09565 PF01471 Putative peptidoglycan binding domain QR42_09570 PF08241 Methyltransferase domain QR42_09580 PF02557 D-alanyl-D-alanine carboxypeptidase QR42_09585 PF01048 Phosphorylase superfamily QR42_09590 PF14191 YodL-like QR42_09595 PF01569 PAP2 superfamily QR42_09605 PF06855 YozE SAM-like fold QR42_09610 PF14122 YokU-like protein, putative antitoxin QR42_09615 PF12544 Lysine-2,3-aminomutase QR42_09620 PF13426 PAS domain QR42_09620 PF02954 Bacterial regulatory protein, Fis family QR42_09620 PF00158 Sigma-54 interaction domain QR42_09630 PF00535 Glycosyl transferase family 2 QR42_09645 PF12996 DUF based on E. rectale Gene description (DUF3880) QR42_09655 PF02719 Polysaccharide biosynthesis protein QR42_09660 PF01641 SelR domain QR42_09665 PF01625 Peptide methionine sulfoxide reductase QR42_09670 PF01047 MarR family QR42_09685 PF17431 Uncharacterized YmpT-like QR42_09690 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) QR42_09695 PF13472 GDSL-like Lipase/Acylhydrolase family QR42_09700 PF02630 SCO1/SenC QR42_09705 PF02645 Uncharacterised protein, DegV family COG1307 QR42_09710 PF10751 Protein of unknown function (DUF2535) QR42_09715 PF00585 C-terminal regulatory domain of Threonine dehydratase QR42_09715 PF00291 Pyridoxal-phosphate dependent enzyme QR42_09720 PF00158 Sigma-54 interaction domain QR42_09720 PF08461 Ribonuclease R winged-helix domain QR42_09725 PF03006 Haemolysin-III related QR42_09735 PF00186 Dihydrofolate reductase QR42_09740 PF00303 Thymidylate synthase QR42_09745 PF04608 Phosphatidylglycerophosphatase A QR42_09750 PF14005 YpjP-like protein QR42_09755 PF04445 Putative SAM-dependent methyltransferase QR42_09760 PF06491 Disulphide isomerase QR42_09765 PF00920 Dehydratase family QR42_09770 PF13769 Virulence factor QR42_09770 PF08712 Scaffold protein Nfu/NifU N terminal QR42_09775 PF01966 HD domain QR42_09780 PF00255 Glutathione peroxidase QR42_09785 PF01268 Formate--tetrahydrofolate ligase QR42_09790 PF04204 Homoserine O-succinyltransferase QR42_09795 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase QR42_09795 PF00534 Glycosyl transferases group 1 QR42_09805 PF00313 'Cold-shock' DNA-binding domain QR42_09815 PF10782 Zinc-finger QR42_09820 PF13456 Reverse transcriptase-like QR42_09825 PF02592 Putative vitamin uptake transporter QR42_09830 PF13456 Reverse transcriptase-like QR42_09840 PF01367 5'-3' exonuclease, C-terminal SAM fold QR42_09840 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain QR42_09845 PF10752 Protein of unknown function (DUF2533) QR42_09850 PF00350 Dynamin family QR42_09855 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family QR42_09860 PF00195 Chalcone and stilbene synthases, N-terminal domain QR42_09860 PF02797 Chalcone and stilbene synthases, C-terminal domain QR42_09865 PF01522 Polysaccharide deacetylase QR42_09870 PF00860 Permease family QR42_09880 PF02074 Carboxypeptidase Taq (M32) metallopeptidase QR42_09885 PF13307 Helicase C-terminal domain QR42_09895 PF02926 THUMP domain QR42_09895 PF01170 Putative RNA methylase family UPF0020 QR42_09900 PF05103 DivIVA protein QR42_09905 PF06908 YspA SLOG family QR42_09910 PF13482 RNase_H superfamily QR42_09915 PF00270 DEAD/DEAH box helicase QR42_09915 PF00271 Helicase conserved C-terminal domain QR42_09915 PF09369 Domain of unknown function (DUF1998) QR42_09920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family QR42_09925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QR42_09935 PF14179 YppG-like protein QR42_09940 PF08807 Bacterial domain of unknown function (DUF1798) QR42_09955 PF10720 Protein of unknown function (DUF2515) QR42_09960 PF03838 Recombination protein U QR42_09965 PF00905 Penicillin binding protein transpeptidase domain QR42_09965 PF00912 Transglycosylase QR42_09975 PF00730 HhH-GPD superfamily base excision DNA repair protein QR42_09975 PF00633 Helix-hairpin-helix motif QR42_09975 PF10576 Iron-sulfur binding domain of endonuclease III QR42_09980 PF07261 Replication initiation and membrane attachment QR42_09985 PF00152 tRNA synthetases class II (D, K and N) QR42_09985 PF01336 OB-fold nucleic acid binding domain QR42_09990 PF03413 Peptidase propeptide and YPEB domain QR42_09990 PF17881 Domain of unknown function (DUF5590) QR42_09995 PF13307 Helicase C-terminal domain QR42_09995 PF00929 Exonuclease QR42_09995 PF04851 Type III restriction enzyme, res subunit QR42_10000 PF02261 Aspartate decarboxylase QR42_10005 PF02569 Pantoate-beta-alanine ligase QR42_10010 PF02548 Ketopantoate hydroxymethyltransferase QR42_10015 PF03099 Biotin/lipoate A/B protein ligase family QR42_10015 PF02237 Biotin protein ligase C terminal domain QR42_10015 PF08279 HTH domain QR42_10020 PF01743 Poly A polymerase head domain QR42_10020 PF13735 tRNA nucleotidyltransferase domain 2 putative QR42_10020 PF12627 Probable RNA and SrmB- binding site of polymerase A QR42_10025 PF00534 Glycosyl transferases group 1 QR42_10025 PF13439 Glycosyltransferase Family 4 QR42_10030 PF02585 GlcNAc-PI de-N-acetylase QR42_10035 PF02142 MGS-like domain QR42_10040 PF05173 Dihydrodipicolinate reductase, C-terminus QR42_10040 PF01113 Dihydrodipicolinate reductase, N-terminus QR42_10045 PF03819 MazG nucleotide pyrophosphohydrolase domain QR42_10050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) QR42_10050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 QR42_10055 PF09577 Sporulation protein YpjB (SpoYpjB) QR42_10060 PF07187 Protein of unknown function (DUF1405) QR42_10065 PF00032 Cytochrome b(C-terminal)/b6/petD QR42_10065 PF13442 Cytochrome C oxidase, cbb3-type, subunit III QR42_10070 PF00033 Cytochrome b/b6/petB QR42_10075 PF00355 Rieske [2Fe-2S] domain QR42_10080 PF10673 Protein of unknown function (DUF2487) QR42_10085 PF08864 UPF0302 domain QR42_10085 PF08858 IDEAL domain QR42_10095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) QR42_10100 PF01842 ACT domain QR42_10100 PF02153 Prephenate dehydrogenase QR42_10105 PF00155 Aminotransferase class I and II QR42_10110 PF00290 Tryptophan synthase alpha chain QR42_10115 PF00291 Pyridoxal-phosphate dependent enzyme QR42_10120 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase QR42_10125 PF00218 Indole-3-glycerol phosphate synthase QR42_10130 PF02885 Glycosyl transferase family, helical bundle domain QR42_10130 PF00591 Glycosyl transferase family, a/b domain QR42_10135 PF00425 chorismate binding enzyme QR42_10135 PF04715 Anthranilate synthase component I, N terminal region QR42_10140 PF07736 Chorismate mutase type I QR42_10145 PF01761 3-dehydroquinate synthase QR42_10150 PF01264 Chorismate synthase QR42_10155 PF01739 CheR methyltransferase, SAM binding domain QR42_10155 PF03705 CheR methyltransferase, all-alpha domain QR42_10160 PF00334 Nucleoside diphosphate kinase QR42_10165 PF00348 Polyprenyl synthetase QR42_10170 PF01209 ubiE/COQ5 methyltransferase family QR42_10175 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 QR42_10180 PF02081 Tryptophan RNA-binding attenuator protein QR42_10185 PF01227 GTP cyclohydrolase I QR42_10190 PF00216 Bacterial DNA-binding protein QR42_10195 PF09547 Stage IV sporulation protein A (spore_IV_A) QR42_10205 PF10966 Protein of unknown function (DUF2768) QR42_10210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus QR42_10210 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus QR42_10215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal QR42_10215 PF01926 50S ribosome-binding GTPase QR42_10225 PF14045 YIEGIA protein QR42_10235 PF01070 FMN-dependent dehydrogenase QR42_10240 PF00575 S1 RNA binding domain QR42_10245 PF02224 Cytidylate kinase QR42_10250 PF17313 Family of unknown function (DUF5359) QR42_10255 PF12945 Flagellar protein YcgR QR42_10255 PF07238 PilZ domain QR42_10260 PF03413 Peptidase propeptide and YPEB domain QR42_10260 PF14620 YpeB sporulation QR42_10265 PF07486 Cell Wall Hydrolase QR42_10265 PF01471 Putative peptidoglycan binding domain QR42_10270 PF13367 PrsW family intramembrane metalloprotease QR42_10280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain QR42_10280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QR42_10285 PF05389 Negative regulator of genetic competence (MecA) QR42_10290 PF00149 Calcineurin-like phosphoesterase QR42_10295 PF10864 Protein of unknown function (DUF2663) QR42_10300 PF01476 LysM domain QR42_10305 PF02517 CPBP intramembrane metalloprotease QR42_10310 PF00271 Helicase conserved C-terminal domain QR42_10310 PF00270 DEAD/DEAH box helicase QR42_10315 PF14493 Helix-turn-helix domain QR42_10325 PF12822 ECF transporter, substrate-specific component QR42_10330 PF01842 ACT domain QR42_10330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QR42_10330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain QR42_10335 PF01476 LysM domain QR42_10335 PF00877 NlpC/P60 family QR42_10345 PF04542 Sigma-70 region 2 QR42_10345 PF08281 Sigma-70, region 4 QR42_10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_10350 PF00989 PAS fold QR42_10350 PF00672 HAMP domain QR42_10350 PF18698 Histidine kinase sensor domain QR42_10350 PF00512 His Kinase A (phospho-acceptor) domain QR42_10355 PF00486 Transcriptional regulatory protein, C terminal QR42_10355 PF00072 Response regulator receiver domain QR42_10360 PF01578 Cytochrome C assembly protein QR42_10365 PF05140 ResB-like family QR42_10370 PF00578 AhpC/TSA family QR42_10375 PF00849 RNA pseudouridylate synthase QR42_10375 PF01479 S4 domain QR42_10380 PF07670 Nucleoside recognition QR42_10385 PF07670 Nucleoside recognition QR42_10390 PF00768 D-alanyl-D-alanine carboxypeptidase QR42_10390 PF07943 Penicillin-binding protein 5, C-terminal domain QR42_10395 PF13047 Protein of unknown function (DUF3907) QR42_10400 PF04079 Segregation and condensation complex subunit ScpB QR42_10405 PF02616 Segregation and condensation protein ScpA QR42_10410 PF03745 Domain of unknown function (DUF309) QR42_10415 PF00583 Acetyltransferase (GNAT) family QR42_10420 PF00885 6,7-dimethyl-8-ribityllumazine synthase QR42_10430 PF00677 Lumazine binding domain QR42_10445 PF00440 Bacterial regulatory proteins, tetR family QR42_10455 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD QR42_10460 PF06207 Protein of unknown function (DUF1002) QR42_10465 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain QR42_10465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain QR42_10470 PF03323 Bacillus/Clostridium GerA spore germination protein QR42_10475 PF14097 Stage V sporulation protein AE1 QR42_10480 PF03862 SpoVAC/SpoVAEB sporulation membrane protein QR42_10485 PF07451 Stage V sporulation protein AD (SpoVAD) QR42_10490 PF03862 SpoVAC/SpoVAEB sporulation membrane protein QR42_10495 PF13782 Stage V sporulation protein AB QR42_10500 PF12164 Stage V sporulation protein AA QR42_10505 PF04539 Sigma-70 region 3 QR42_10505 PF04545 Sigma-70, region 4 QR42_10505 PF04542 Sigma-70 region 2 QR42_10510 PF13581 Histidine kinase-like ATPase domain QR42_10515 PF01740 STAS domain QR42_10520 PF00768 D-alanyl-D-alanine carboxypeptidase QR42_10520 PF07943 Penicillin-binding protein 5, C-terminal domain QR42_10525 PF01048 Phosphorylase superfamily QR42_10530 PF01676 Metalloenzyme superfamily QR42_10535 PF02899 Phage integrase, N-terminal SAM-like domain QR42_10535 PF00589 Phage integrase family QR42_10540 PF14004 Protein of unknown function (DUF4227) QR42_10545 PF01475 Ferric uptake regulator family QR42_10550 PF01944 Stage II sporulation protein M QR42_10555 PF00082 Subtilase family QR42_10555 PF05922 Peptidase inhibitor I9 QR42_10565 PF13673 Acetyltransferase (GNAT) domain QR42_10575 PF00293 NUDIX domain QR42_10580 PF00248 Aldo/keto reductase family QR42_10595 PF12146 Serine aminopeptidase, S33 QR42_10600 PF18801 response regulator aspartate phosphatase H, N terminal QR42_10610 PF10827 Protein of unknown function (DUF2552) QR42_10615 PF01521 Iron-sulphur cluster biosynthesis QR42_10620 PF04229 GrpB protein QR42_10620 PF13673 Acetyltransferase (GNAT) domain QR42_10625 PF00583 Acetyltransferase (GNAT) family QR42_10630 PF10787 Uncharacterised protein from bacillus cereus group QR42_10635 PF11799 impB/mucB/samB family C-terminal domain QR42_10635 PF00817 impB/mucB/samB family QR42_10640 PF08863 YolD-like protein QR42_10645 PF07690 Major Facilitator Superfamily QR42_10650 PF00485 Phosphoribulokinase / Uridine kinase family QR42_10655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QR42_10655 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_10660 PF00106 short chain dehydrogenase QR42_10665 PF00753 Metallo-beta-lactamase superfamily QR42_10670 PF03807 NADP oxidoreductase coenzyme F420-dependent QR42_10670 PF14748 Pyrroline-5-carboxylate reductase dimerisation QR42_10680 PF01546 Peptidase family M20/M25/M40 QR42_10685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family QR42_10690 PF12146 Serine aminopeptidase, S33 QR42_10695 PF12897 Alanine-glyoxylate amino-transferase QR42_10700 PF12706 Beta-lactamase superfamily domain QR42_10705 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain QR42_10705 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain QR42_10710 PF07702 UTRA domain QR42_10710 PF00392 Bacterial regulatory proteins, gntR family QR42_10715 PF00232 Glycosyl hydrolase family 1 QR42_10720 PF02378 Phosphotransferase system, EIIC QR42_10725 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit QR42_10730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_10740 PF06800 Sugar transport protein QR42_10745 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain QR42_10745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase QR42_10750 PF11799 impB/mucB/samB family C-terminal domain QR42_10750 PF11798 IMS family HHH motif QR42_10750 PF00817 impB/mucB/samB family QR42_10755 PF00795 Carbon-nitrogen hydrolase QR42_10765 PF02096 60Kd inner membrane protein QR42_10775 PF07687 Peptidase dimerisation domain QR42_10775 PF01546 Peptidase family M20/M25/M40 QR42_10780 PF01039 Carboxyl transferase domain QR42_10790 PF03734 L,D-transpeptidase catalytic domain QR42_10795 PF06081 Aromatic acid exporter family member 1 QR42_10795 PF11728 Putative aromatic acid exporter C-terminal domain QR42_10800 PF00005 ABC transporter QR42_10805 PF00528 Binding-protein-dependent transport system inner membrane component QR42_10810 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_10815 PF06491 Disulphide isomerase QR42_10820 PF00781 Diacylglycerol kinase catalytic domain QR42_10830 PF00364 Biotin-requiring enzyme QR42_10830 PF02817 e3 binding domain QR42_10830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) QR42_10835 PF02780 Transketolase, C-terminal domain QR42_10835 PF02779 Transketolase, pyrimidine binding domain QR42_10840 PF00676 Dehydrogenase E1 component QR42_10845 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_10845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain QR42_10850 PF00871 Acetokinase family QR42_10855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QR42_10855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain QR42_10860 PF01515 Phosphate acetyl/butaryl transferase QR42_10865 PF00989 PAS fold QR42_10865 PF00158 Sigma-54 interaction domain QR42_10865 PF02954 Bacterial regulatory protein, Fis family QR42_10870 PF11118 Protein of unknown function (DUF2627) QR42_10875 PF03009 Glycerophosphoryl diester phosphodiesterase family QR42_10880 PF18801 response regulator aspartate phosphatase H, N terminal QR42_10890 PF08769 Sporulation initiation factor Spo0A C terminal QR42_10890 PF00072 Response regulator receiver domain QR42_10895 PF17820 PDZ domain QR42_10895 PF05580 SpoIVB peptidase S55 QR42_10900 PF13476 AAA domain QR42_10905 PF01316 Arginine repressor, DNA binding domain QR42_10905 PF02863 Arginine repressor, C-terminal domain QR42_10910 PF01728 FtsJ-like methyltransferase QR42_10910 PF01479 S4 domain QR42_10915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase QR42_10915 PF02779 Transketolase, pyrimidine binding domain QR42_10915 PF02780 Transketolase, C-terminal domain QR42_10920 PF00348 Polyprenyl synthetase QR42_10925 PF02609 Exonuclease VII small subunit QR42_10930 PF02601 Exonuclease VII, large subunit QR42_10930 PF13742 OB-fold nucleic acid binding domain QR42_10935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain QR42_10935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain QR42_10940 PF01029 NusB family QR42_10945 PF03780 Asp23 family, cell envelope-related function QR42_10950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain QR42_10950 PF00289 Biotin carboxylase, N-terminal domain QR42_10950 PF02785 Biotin carboxylase C-terminal domain QR42_10955 PF00364 Biotin-requiring enzyme QR42_10960 PF12685 SpoIIIAH-like protein QR42_10970 PF09581 Stage III sporulation protein AF (Spore_III_AF) QR42_10975 PF09546 Stage III sporulation protein AE (spore_III_AE) QR42_10980 PF06686 Stage III sporulation protein AC/AD protein family QR42_10985 PF06686 Stage III sporulation protein AC/AD protein family QR42_10990 PF09548 Stage III sporulation protein AB (spore_III_AB) QR42_11000 PF10942 Protein of unknown function (DUF2619) QR42_11005 PF09285 Elongation factor P, C-terminal QR42_11005 PF01132 Elongation factor P (EF-P) OB domain QR42_11005 PF08207 Elongation factor P (EF-P) KOW-like domain QR42_11010 PF00557 Metallopeptidase family M24 QR42_11010 PF01321 Creatinase/Prolidase N-terminal domain QR42_11015 PF01220 Dehydroquinase class II QR42_11020 PF11085 Conserved membrane protein YqhR QR42_11025 PF07136 Protein of unknown function (DUF1385) QR42_11035 PF01734 Patatin-like phospholipase QR42_11040 PF01325 Iron dependent repressor, N-terminal DNA binding domain QR42_11040 PF02742 Iron dependent repressor, metal binding and dimerisation domain QR42_11045 PF03099 Biotin/lipoate A/B protein ligase family QR42_11050 PF00581 Rhodanese-like domain QR42_11055 PF02347 Glycine cleavage system P-protein QR42_11060 PF02347 Glycine cleavage system P-protein QR42_11065 PF01571 Aminomethyltransferase folate-binding domain QR42_11065 PF08669 Glycine cleavage T-protein C-terminal barrel domain QR42_11070 PF00271 Helicase conserved C-terminal domain QR42_11070 PF00176 SNF2 family N-terminal domain QR42_11075 PF11079 Bacterial protein YqhG of unknown function QR42_11080 PF08671 Anti-repressor SinI QR42_11080 PF01381 Helix-turn-helix QR42_11085 PF12389 Camelysin metallo-endopeptidase QR42_11100 PF13028 Protein of unknown function (DUF3889) QR42_11105 PF14038 YqzE-like protein QR42_11125 PF07963 Prokaryotic N-terminal methylation motif QR42_11130 PF07963 Prokaryotic N-terminal methylation motif QR42_11135 PF00482 Type II secretion system (T2SS), protein F QR42_11140 PF00437 Type II/IV secretion system protein QR42_11145 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain QR42_11145 PF01740 STAS domain QR42_11155 PF03960 ArsC family QR42_11160 PF11117 Protein of unknown function (DUF2626) QR42_11165 PF00753 Metallo-beta-lactamase superfamily QR42_11170 PF10958 Protein of unknown function (DUF2759) QR42_11175 PF01910 Thiamine-binding protein QR42_11180 PF07690 Major Facilitator Superfamily QR42_11185 PF00246 Zinc carboxypeptidase QR42_11190 PF00884 Sulfatase QR42_11195 PF00480 ROK family QR42_11200 PF06014 Bacterial protein of unknown function (DUF910) QR42_11205 PF01694 Rhomboid family QR42_11215 PF01812 5-formyltetrahydrofolate cyclo-ligase family QR42_11220 PF00471 Ribosomal protein L33 QR42_11235 PF00005 ABC transporter QR42_11240 PF00005 ABC transporter QR42_11245 PF00528 Binding-protein-dependent transport system inner membrane component QR42_11250 PF00528 Binding-protein-dependent transport system inner membrane component QR42_11255 PF12849 PBP superfamily domain QR42_11265 PF07690 Major Facilitator Superfamily QR42_11270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain QR42_11270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain QR42_11275 PF04306 Protein of unknown function (DUF456) QR42_11280 PF06691 Protein of unknown function (DUF1189) QR42_11285 PF13302 Acetyltransferase (GNAT) domain QR42_11295 PF04551 GcpE protein QR42_11310 PF00480 ROK family QR42_11315 PF01475 Ferric uptake regulator family QR42_11320 PF00950 ABC 3 transport family QR42_11325 PF00005 ABC transporter QR42_11330 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 QR42_11330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) QR42_11335 PF11116 Protein of unknown function (DUF2624) QR42_11340 PF01261 Xylose isomerase-like TIM barrel QR42_11345 PF00271 Helicase conserved C-terminal domain QR42_11345 PF00270 DEAD/DEAH box helicase QR42_11355 PF02401 LytB protein QR42_11360 PF01784 NIF3 (NGG1p interacting factor 3) QR42_11365 PF04816 tRNA (adenine(22)-N(1))-methyltransferase QR42_11370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III QR42_11375 PF04539 Sigma-70 region 3 QR42_11375 PF04545 Sigma-70, region 4 QR42_11375 PF00140 Sigma-70 factor, region 1.2 QR42_11375 PF04542 Sigma-70 region 2 QR42_11375 PF03979 Sigma-70 factor, region 1.1 QR42_11380 PF10410 DnaB-helicase binding domain of primase QR42_11380 PF08275 DNA primase catalytic core, N-terminal domain QR42_11380 PF01807 CHC2 zinc finger QR42_11385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 QR42_11390 PF03618 Kinase/pyrophosphorylase QR42_11395 PF00571 CBS domain QR42_11395 PF08279 HTH domain QR42_11400 PF02092 Glycyl-tRNA synthetase beta subunit QR42_11405 PF02091 Glycyl-tRNA synthetase alpha subunit QR42_11410 PF11967 Recombination protein O N terminal QR42_11410 PF02565 Recombination protein O C terminal QR42_11415 PF07650 KH domain QR42_11415 PF01926 50S ribosome-binding GTPase QR42_11420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region QR42_11425 PF01219 Prokaryotic diacylglycerol kinase QR42_11430 PF02130 Uncharacterized protein family UPF0054 QR42_11435 PF07698 7TM receptor with intracellular HD hydrolase QR42_11435 PF07697 7TM-HD extracellular QR42_11435 PF01966 HD domain QR42_11440 PF02562 PhoH-like protein QR42_11445 PF06898 Putative stage IV sporulation protein YqfD QR42_11450 PF07873 YabP family QR42_11460 PF12127 SigmaW regulon antibacterial QR42_11465 PF01972 Serine dehydrogenase proteinase QR42_11465 PF01957 NfeD-like C-terminal, partner-binding QR42_11470 PF09424 Yqey-like protein QR42_11475 PF01165 Ribosomal protein S21 QR42_11480 PF02690 Na+/Pi-cotransporter QR42_11485 PF04055 Radical SAM superfamily QR42_11485 PF01938 TRAM domain QR42_11485 PF00919 Uncharacterized protein family UPF0004 QR42_11490 PF04452 RNA methyltransferase QR42_11500 PF00684 DnaJ central domain QR42_11500 PF00226 DnaJ domain QR42_11500 PF01556 DnaJ C terminal domain QR42_11505 PF00012 Hsp70 protein QR42_11510 PF01025 GrpE QR42_11515 PF01628 HrcA protein C terminal domain QR42_11520 PF06969 HemN C-terminal domain QR42_11520 PF04055 Radical SAM superfamily QR42_11525 PF06421 GTP-binding protein LepA C-terminus QR42_11525 PF00009 Elongation factor Tu GTP binding domain QR42_11525 PF03144 Elongation factor Tu domain 2 QR42_11525 PF00679 Elongation factor G C-terminus QR42_11530 PF12438 Protein of unknown function (DUF3679) QR42_11535 PF07454 Stage II sporulation protein P (SpoIIP) QR42_11540 PF03418 Germination protease QR42_11545 PF01649 Ribosomal protein S20 QR42_11550 PF06144 DNA polymerase III, delta subunit QR42_11555 PF14141 YqzM-like protein QR42_11560 PF03772 Competence protein QR42_11560 PF00753 Metallo-beta-lactamase superfamily QR42_11560 PF13567 Domain of unknown function (DUF4131) QR42_11565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region QR42_11575 PF03807 NADP oxidoreductase coenzyme F420-dependent QR42_11575 PF14748 Pyrroline-5-carboxylate reductase dimerisation QR42_11580 PF13649 Methyltransferase domain QR42_11590 PF01966 HD domain QR42_11595 PF01467 Cytidylyltransferase-like QR42_11600 PF01985 CRS1 / YhbY (CRM) domain QR42_11605 PF01488 Shikimate / quinate 5-dehydrogenase QR42_11605 PF08501 Shikimate dehydrogenase substrate binding domain QR42_11605 PF18317 Shikimate 5'-dehydrogenase C-terminal domain QR42_11610 PF01926 50S ribosome-binding GTPase QR42_11620 PF08970 Sporulation inhibitor A QR42_11625 PF00657 GDSL-like Lipase/Acylhydrolase QR42_11630 PF01522 Polysaccharide deacetylase QR42_11635 PF18801 response regulator aspartate phosphatase H, N terminal QR42_11635 PF13176 Tetratricopeptide repeat QR42_11640 PF04545 Sigma-70, region 4 QR42_11640 PF04542 Sigma-70 region 2 QR42_11660 PF13344 Haloacid dehalogenase-like hydrolase QR42_11660 PF00293 NUDIX domain QR42_11670 PF13739 Deacetylase PdaC QR42_11670 PF01522 Polysaccharide deacetylase QR42_11670 PF11738 Protein of unknown function (DUF3298) QR42_11695 PF00083 Sugar (and other) transporter QR42_11700 PF02610 L-arabinose isomerase QR42_11700 PF11762 L-arabinose isomerase C-terminal domain QR42_11705 PF00596 Class II Aldolase and Adducin N-terminal domain QR42_11715 PF00392 Bacterial regulatory proteins, gntR family QR42_11720 PF00144 Beta-lactamase QR42_11735 PF01380 SIS domain QR42_11740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family QR42_11745 PF01638 HxlR-like helix-turn-helix QR42_11750 PF00135 Carboxylesterase family QR42_11760 PF14176 YxiJ-like protein QR42_11800 PF05593 RHS Repeat QR42_11810 PF14176 YxiJ-like protein QR42_11880 PF00440 Bacterial regulatory proteins, tetR family QR42_11885 PF01040 UbiA prenyltransferase family QR42_11890 PF00905 Penicillin binding protein transpeptidase domain QR42_11895 PF02770 Acyl-CoA dehydrogenase, middle domain QR42_11895 PF08028 Acyl-CoA dehydrogenase, C-terminal domain QR42_11895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain QR42_11900 PF00005 ABC transporter QR42_11905 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_11910 PF00528 Binding-protein-dependent transport system inner membrane component QR42_11915 PF00528 Binding-protein-dependent transport system inner membrane component QR42_11920 PF05067 Manganese containing catalase QR42_11925 PF08240 Alcohol dehydrogenase GroES-like domain QR42_11925 PF00107 Zinc-binding dehydrogenase QR42_11940 PF08241 Methyltransferase domain QR42_11945 PF08240 Alcohol dehydrogenase GroES-like domain QR42_11945 PF00107 Zinc-binding dehydrogenase QR42_11950 PF08241 Methyltransferase domain QR42_11955 PF14143 YrhC-like protein QR42_11960 PF01053 Cys/Met metabolism PLP-dependent enzyme QR42_11965 PF00291 Pyridoxal-phosphate dependent enzyme QR42_11970 PF01048 Phosphorylase superfamily QR42_11975 PF13649 Methyltransferase domain QR42_11980 PF10750 Protein of unknown function (DUF2536) QR42_11985 PF07423 Domain of unknown function (DUF1510) QR42_11990 PF00905 Penicillin binding protein transpeptidase domain QR42_11990 PF03717 Penicillin-binding Protein dimerisation domain QR42_11995 PF03449 Transcription elongation factor, N-terminal QR42_11995 PF01272 Transcription elongation factor, GreA/GreB, C-term QR42_12000 PF02368 Bacterial Ig-like domain (group 2) QR42_12005 PF00485 Phosphoribulokinase / Uridine kinase family QR42_12025 PF02618 YceG-like family QR42_12030 PF00108 Thiolase, N-terminal domain QR42_12030 PF02803 Thiolase, C-terminal domain QR42_12035 PF00501 AMP-binding enzyme QR42_12035 PF13193 AMP-binding enzyme C-terminal domain QR42_12040 PF02632 BioY family QR42_12045 PF06949 Protein of unknown function (DUF1292) QR42_12050 PF03652 Holliday junction resolvase QR42_12055 PF06135 IreB regulatory phosphoprotein QR42_12060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain QR42_12060 PF01411 tRNA synthetases class II (A) QR42_12060 PF02272 DHHA1 domain QR42_12065 PF01594 AI-2E family transporter QR42_12070 PF00005 ABC transporter QR42_12075 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_12080 PF00528 Binding-protein-dependent transport system inner membrane component QR42_12085 PF00528 Binding-protein-dependent transport system inner membrane component QR42_12095 PF05239 PRC-barrel domain QR42_12100 PF13538 UvrD-like helicase C-terminal domain QR42_12100 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain QR42_12100 PF14490 Helix-hairpin-helix containing domain QR42_12105 PF07719 Tetratricopeptide repeat QR42_12105 PF13181 Tetratricopeptide repeat QR42_12115 PF00266 Aminotransferase class-V QR42_12120 PF02082 Transcriptional regulator QR42_12125 PF12002 MgsA AAA+ ATPase C terminal QR42_12125 PF16193 AAA C-terminal domain QR42_12125 PF05496 Holliday junction DNA helicase RuvB P-loop domain QR42_12130 PF00899 ThiF family QR42_12135 PF00152 tRNA synthetases class II (D, K and N) QR42_12135 PF01336 OB-fold nucleic acid binding domain QR42_12135 PF02938 GAD domain QR42_12140 PF13393 Histidyl-tRNA synthetase QR42_12140 PF03129 Anticodon binding domain QR42_12145 PF01520 N-acetylmuramoyl-L-alanine amidase QR42_12145 PF08239 Bacterial SH3 domain QR42_12150 PF02580 D-Tyr-tRNA(Tyr) deacylase QR42_12155 PF04607 Region found in RelA / SpoT proteins QR42_12155 PF13291 ACT domain QR42_12155 PF02824 TGS domain QR42_12160 PF00156 Phosphoribosyl transferase domain QR42_12165 PF10141 Single-strand DNA-specific exonuclease, C terminal domain QR42_12165 PF17768 RecJ OB domain QR42_12165 PF02272 DHHA1 domain QR42_12165 PF01368 DHH family QR42_12170 PF06305 Lipopolysaccharide assembly protein A domain QR42_12175 PF02080 TrkA-C domain QR42_12180 PF02355 Protein export membrane protein QR42_12180 PF07549 SecD/SecF GG Motif QR42_12185 PF13797 Post-transcriptional regulator QR42_12190 PF14667 Polysaccharide biosynthesis C-terminal domain QR42_12190 PF01943 Polysaccharide biosynthesis protein QR42_12195 PF04239 Protein of unknown function (DUF421) QR42_12200 PF12670 Protein of unknown function (DUF3792) QR42_12205 PF02699 Preprotein translocase subunit QR42_12210 PF01702 Queuine tRNA-ribosyltransferase QR42_12215 PF02547 Queuosine biosynthesis protein QR42_12220 PF11146 Protein of unknown function (DUF2905) QR42_12225 PF05491 RuvB C-terminal winged helix domain QR42_12225 PF05496 Holliday junction DNA helicase RuvB P-loop domain QR42_12225 PF17864 RuvB AAA lid domain QR42_12230 PF01330 RuvA N terminal domain QR42_12230 PF07499 RuvA, C-terminal domain QR42_12235 PF08955 BofC C-terminal domain QR42_12235 PF08977 Bypass of Forespore C, N terminal QR42_12250 PF13667 ThiC-associated domain QR42_12250 PF01964 Radical SAM ThiC family QR42_12260 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) QR42_12265 PF01476 LysM domain QR42_12265 PF01476 LysM domain QR42_12270 PF02445 Quinolinate synthetase A protein QR42_12275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain QR42_12275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain QR42_12280 PF00890 FAD binding domain QR42_12280 PF02910 Fumarate reductase flavoprotein C-term QR42_12285 PF00266 Aminotransferase class-V QR42_12290 PF02829 3H domain QR42_12290 PF08279 HTH domain QR42_12295 PF00800 Prephenate dehydratase QR42_12295 PF01842 ACT domain QR42_12300 PF01842 ACT domain QR42_12305 PF01018 GTP1/OBG QR42_12305 PF01926 50S ribosome-binding GTPase QR42_12305 PF09269 Domain of unknown function (DUF1967) QR42_12310 PF14682 Sporulation initiation phospho-transferase B, C-terminal QR42_12310 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain QR42_12315 PF01016 Ribosomal L27 protein QR42_12320 PF04327 Cysteine protease Prp QR42_12325 PF00829 Ribosomal prokaryotic L21 protein QR42_12330 PF02163 Peptidase family M50 QR42_12335 PF01551 Peptidase family M23 QR42_12340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain QR42_12345 PF03775 Septum formation inhibitor MinC, C-terminal domain QR42_12350 PF04093 rod shape-determining protein MreD QR42_12355 PF04085 rod shape-determining protein MreC QR42_12365 PF04002 RadC-like JAB domain QR42_12370 PF02545 Maf-like protein QR42_12380 PF01478 Type IV leader peptidase family QR42_12380 PF06750 Bacterial Peptidase A24 N-terminal domain QR42_12385 PF08245 Mur ligase middle domain QR42_12385 PF02875 Mur ligase family, glutamate ligase domain QR42_12390 PF00133 tRNA synthetases class I (I, L, M and V) QR42_12390 PF10458 Valyl tRNA synthetase tRNA binding arm QR42_12390 PF08264 Anticodon-binding domain of tRNA QR42_12405 PF01476 LysM domain QR42_12410 PF00202 Aminotransferase class-III QR42_12415 PF00490 Delta-aminolevulinic acid dehydratase QR42_12420 PF02602 Uroporphyrinogen-III synthase HemD QR42_12425 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain QR42_12425 PF03900 Porphobilinogen deaminase, C-terminal domain QR42_12430 PF01578 Cytochrome C assembly protein QR42_12435 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain QR42_12435 PF01488 Shikimate / quinate 5-dehydrogenase QR42_12435 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain QR42_12445 PF01926 50S ribosome-binding GTPase QR42_12450 PF00004 ATPase family associated with various cellular activities (AAA) QR42_12450 PF05362 Lon protease (S16) C-terminal proteolytic domain QR42_12450 PF02190 ATP-dependent protease La (LON) substrate-binding domain QR42_12455 PF05362 Lon protease (S16) C-terminal proteolytic domain QR42_12455 PF00004 ATPase family associated with various cellular activities (AAA) QR42_12460 PF07724 AAA domain (Cdc48 subfamily) QR42_12460 PF10431 C-terminal, D2-small domain, of ClpB protein QR42_12460 PF06689 ClpX C4-type zinc finger QR42_12465 PF05698 Bacterial trigger factor protein (TF) C-terminus QR42_12465 PF05697 Bacterial trigger factor protein (TF) QR42_12465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase QR42_12475 PF00694 Aconitase C-terminal domain QR42_12480 PF00330 Aconitase family (aconitate hydratase) QR42_12485 PF00180 Isocitrate/isopropylmalate dehydrogenase QR42_12490 PF08502 LeuA allosteric (dimerisation) domain QR42_12490 PF00682 HMGL-like QR42_12495 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain QR42_12495 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain QR42_12500 PF10369 Small subunit of acetolactate synthase QR42_12500 PF01842 ACT domain QR42_12505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QR42_12505 PF00205 Thiamine pyrophosphate enzyme, central domain QR42_12505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QR42_12510 PF01063 Amino-transferase class IV QR42_12515 PF10282 Lactonase, 7-bladed beta-propeller QR42_12520 PF06803 Protein of unknown function (DUF1232) QR42_12525 PF04914 DltD protein QR42_12530 PF00550 Phosphopantetheine attachment site QR42_12535 PF03062 MBOAT, membrane-bound O-acyltransferase family QR42_12540 PF00501 AMP-binding enzyme QR42_12540 PF13193 AMP-binding enzyme C-terminal domain QR42_12565 PF12850 Calcineurin-like phosphoesterase superfamily domain QR42_12570 PF01725 Ham1 family QR42_12575 PF01138 3' exoribonuclease family, domain 1 QR42_12575 PF03725 3' exoribonuclease family, domain 2 QR42_12580 PF10646 Sporulation and spore germination QR42_12585 PF01177 Asp/Glu/Hydantoin racemase QR42_12590 PF01047 MarR family QR42_12595 PF00196 Bacterial regulatory proteins, luxR family QR42_12600 PF03600 Citrate transporter QR42_12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_12605 PF03466 LysR substrate binding domain QR42_12610 PF04303 PrpF protein QR42_12615 PF03099 Biotin/lipoate A/B protein ligase family QR42_12615 PF02237 Biotin protein ligase C terminal domain QR42_12620 PF03061 Thioesterase superfamily QR42_12625 PF13183 4Fe-4S dicluster domain QR42_12625 PF13085 2Fe-2S iron-sulfur cluster binding domain QR42_12630 PF02910 Fumarate reductase flavoprotein C-term QR42_12630 PF00890 FAD binding domain QR42_12635 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit QR42_12640 PF10702 Protein of unknown function (DUF2507) QR42_12645 PF01842 ACT domain QR42_12645 PF13840 ACT domain QR42_12645 PF00696 Amino acid kinase family QR42_12650 PF08459 UvrC Helix-hairpin-helix N-terminal QR42_12650 PF02151 UvrB/uvrC motif QR42_12650 PF01541 GIY-YIG catalytic domain QR42_12655 PF00085 Thioredoxin QR42_12660 PF06964 Alpha-L-arabinofuranosidase C-terminal domain QR42_12665 PF01012 Electron transfer flavoprotein domain QR42_12665 PF00766 Electron transfer flavoprotein FAD-binding domain QR42_12670 PF01012 Electron transfer flavoprotein domain QR42_12675 PF00378 Enoyl-CoA hydratase/isomerase QR42_12680 PF00440 Bacterial regulatory proteins, tetR family QR42_12680 PF08359 YsiA-like protein, C-terminal region QR42_12685 PF13193 AMP-binding enzyme C-terminal domain QR42_12685 PF00501 AMP-binding enzyme QR42_12695 PF03994 Domain of Unknown Function (DUF350) QR42_12700 PF00488 MutS domain V QR42_12700 PF01713 Smr domain QR42_12705 PF14791 DNA polymerase beta thumb QR42_12705 PF14716 Helix-hairpin-helix domain QR42_12705 PF02811 PHP domain QR42_12710 PF02674 Colicin V production protein QR42_12715 PF05164 Cell division protein ZapA QR42_12720 PF11858 Domain of unknown function (DUF3378) QR42_12720 PF01351 Ribonuclease HII QR42_12725 PF03483 B3/4 domain QR42_12725 PF03484 tRNA synthetase B5 domain QR42_12725 PF03147 Ferredoxin-fold anticodon binding domain QR42_12725 PF01588 Putative tRNA binding domain QR42_12725 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain QR42_12730 PF01409 tRNA synthetases class II core domain (F) QR42_12730 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain QR42_12735 PF08032 RNA 2'-O ribose methyltransferase substrate binding QR42_12735 PF00588 SpoU rRNA Methylase family QR42_12740 PF14098 Small, acid-soluble spore protein I QR42_12745 PF02554 Carbon starvation protein CstA QR42_12745 PF13722 5TM C-terminal transporter carbon starvation CstA QR42_12750 PF05343 M42 glutamyl aminopeptidase QR42_12760 PF06961 Protein of unknown function (DUF1294) QR42_12765 PF00453 Ribosomal protein L20 QR42_12770 PF01632 Ribosomal protein L35 QR42_12775 PF00707 Translation initiation factor IF-3, C-terminal domain QR42_12775 PF05198 Translation initiation factor IF-3, N-terminal domain QR42_12780 PF04172 LrgB-like family QR42_12785 PF03788 LrgA family QR42_12790 PF00072 Response regulator receiver domain QR42_12790 PF04397 LytTr DNA-binding domain QR42_12795 PF07694 5TMR of 5TMR-LYT QR42_12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_12795 PF06580 Histidine kinase QR42_12805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_12805 PF08447 PAS fold QR42_12805 PF13426 PAS domain QR42_12810 PF03129 Anticodon binding domain QR42_12810 PF02824 TGS domain QR42_12810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) QR42_12810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain QR42_12815 PF08812 YtxC-like family QR42_12820 PF09335 SNARE associated Golgi protein QR42_12825 PF07319 Primosomal protein DnaI N-terminus QR42_12825 PF01695 IstB-like ATP binding protein QR42_12830 PF07261 Replication initiation and membrane attachment QR42_12835 PF03477 ATP cone domain QR42_12845 PF02675 S-adenosylmethionine decarboxylase QR42_12850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain QR42_12850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QR42_12855 PF01121 Dephospho-CoA kinase QR42_12860 PF02659 Putative manganese efflux pump QR42_12865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain QR42_12865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain QR42_12865 PF06827 Zinc finger found in FPG and IleRS QR42_12870 PF00476 DNA polymerase family A QR42_12870 PF01367 5'-3' exonuclease, C-terminal SAM fold QR42_12870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain QR42_12875 PF16736 Single Cache-like QR42_12875 PF00989 PAS fold QR42_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_12875 PF00512 His Kinase A (phospho-acceptor) domain QR42_12880 PF00486 Transcriptional regulatory protein, C terminal QR42_12880 PF00072 Response regulator receiver domain QR42_12885 PF00056 lactate/malate dehydrogenase, NAD binding domain QR42_12885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain QR42_12890 PF00180 Isocitrate/isopropylmalate dehydrogenase QR42_12895 PF00285 Citrate synthase, C-terminal domain QR42_12900 PF04284 Protein of unknown function (DUF441) QR42_12905 PF01594 AI-2E family transporter QR42_12910 PF04186 FxsA cytoplasmic membrane protein QR42_12915 PF00224 Pyruvate kinase, barrel domain QR42_12915 PF02887 Pyruvate kinase, alpha/beta domain QR42_12915 PF00391 PEP-utilising enzyme, mobile domain QR42_12920 PF00365 Phosphofructokinase QR42_12925 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit QR42_12930 PF17848 Acetyl-coA carboxylase zinc finger domain QR42_12930 PF01039 Carboxyl transferase domain QR42_12935 PF00390 Malic enzyme, N-terminal domain QR42_12935 PF03949 Malic enzyme, NAD binding domain QR42_12940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain QR42_12940 PF01336 OB-fold nucleic acid binding domain QR42_12940 PF14579 Helix-hairpin-helix motif QR42_12940 PF02811 PHP domain QR42_12940 PF07733 Bacterial DNA polymerase III alpha NTPase domain QR42_12945 PF14034 Sporulation protein YtrH QR42_12960 PF02272 DHHA1 domain QR42_12960 PF01368 DHH family QR42_12965 PF14007 YtpI-like protein QR42_12970 PF03061 Thioesterase superfamily QR42_12970 PF00571 CBS domain QR42_12970 PF07085 DRTGG domain QR42_12970 PF00392 Bacterial regulatory proteins, gntR family QR42_12990 PF14698 Argininosuccinate lyase C-terminal QR42_12990 PF00206 Lyase QR42_12995 PF00764 Arginosuccinate synthase QR42_13000 PF00994 Probable molybdopterin binding domain QR42_13005 PF00871 Acetokinase family QR42_13010 PF02384 N-6 DNA Methylase QR42_13015 PF08534 Redoxin QR42_13020 PF09579 Sporulation protein YtfJ (Spore_YtfJ) QR42_13025 PF11167 Protein of unknown function (DUF2953) QR42_13030 PF06271 RDD family QR42_13035 PF01343 Peptidase family S49 QR42_13040 PF01513 ATP-NAD kinase QR42_13045 PF03880 DbpA RNA binding domain QR42_13045 PF00270 DEAD/DEAH box helicase QR42_13045 PF00271 Helicase conserved C-terminal domain QR42_13050 PF00487 Fatty acid desaturase QR42_13055 PF07730 Histidine kinase QR42_13060 PF00196 Bacterial regulatory proteins, luxR family QR42_13060 PF00072 Response regulator receiver domain QR42_13065 PF01497 Periplasmic binding protein QR42_13070 PF00072 Response regulator receiver domain QR42_13070 PF00486 Transcriptional regulatory protein, C terminal QR42_13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_13080 PF00005 ABC transporter QR42_13085 PF02687 FtsX-like permease family QR42_13090 PF01979 Amidohydrolase family QR42_13095 PF02525 Flavodoxin-like fold QR42_13110 PF01810 LysE type translocator QR42_13115 PF13193 AMP-binding enzyme C-terminal domain QR42_13115 PF00501 AMP-binding enzyme QR42_13120 PF00269 Small, acid-soluble spore proteins, alpha/beta type QR42_13125 PF02568 Thiamine biosynthesis protein (ThiI) QR42_13125 PF02926 THUMP domain QR42_13130 PF00266 Aminotransferase class-V QR42_13135 PF05525 Branched-chain amino acid transport protein QR42_13140 PF05525 Branched-chain amino acid transport protein QR42_13145 PF06160 Septation ring formation regulator, EzrA QR42_13150 PF02811 PHP domain QR42_13155 PF00440 Bacterial regulatory proteins, tetR family QR42_13160 PF13185 GAF domain QR42_13165 PF00163 Ribosomal protein S4/S9 N-terminal domain QR42_13165 PF01479 S4 domain QR42_13175 PF00857 Isochorismatase family QR42_13180 PF01674 Lipase (class 2) QR42_13185 PF03992 Antibiotic biosynthesis monooxygenase QR42_13190 PF00579 tRNA synthetases class I (W and Y) QR42_13190 PF01479 S4 domain QR42_13195 PF00501 AMP-binding enzyme QR42_13195 PF13193 AMP-binding enzyme C-terminal domain QR42_13200 PF00583 Acetyltransferase (GNAT) family QR42_13205 PF00571 CBS domain QR42_13210 PF00850 Histone deacetylase domain QR42_13215 PF00356 Bacterial regulatory proteins, lacI family QR42_13220 PF00793 DAHP synthetase I family QR42_13220 PF01817 Chorismate mutase type II QR42_13225 PF11009 Protein of unknown function (DUF2847) QR42_13230 PF12732 YtxH-like protein QR42_13235 PF06103 Bacterial protein of unknown function (DUF948) QR42_13240 PF02875 Mur ligase family, glutamate ligase domain QR42_13240 PF01225 Mur ligase family, catalytic domain QR42_13240 PF08245 Mur ligase middle domain QR42_13245 PF17854 FtsK alpha domain QR42_13245 PF01580 FtsK/SpoIIIE family QR42_13245 PF09397 Ftsk gamma domain QR42_13250 PF01588 Putative tRNA binding domain QR42_13250 PF14794 Domain of unknown function (DUF4479) QR42_13255 PF07285 Protein of unknown function (DUF1444) QR42_13260 PF00085 Thioredoxin QR42_13270 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ QR42_13275 PF05343 M42 glutamyl aminopeptidase QR42_13280 PF03413 Peptidase propeptide and YPEB domain QR42_13285 PF00390 Malic enzyme, N-terminal domain QR42_13285 PF03949 Malic enzyme, NAD binding domain QR42_13290 PF00753 Metallo-beta-lactamase superfamily QR42_13295 PF02390 Putative methyltransferase QR42_13300 PF14165 YtzH-like protein QR42_13305 PF01636 Phosphotransferase enzyme family QR42_13315 PF00781 Diacylglycerol kinase catalytic domain QR42_13330 PF00291 Pyridoxal-phosphate dependent enzyme QR42_13335 PF03575 Peptidase family S51 QR42_13340 PF01546 Peptidase family M20/M25/M40 QR42_13345 PF00860 Permease family QR42_13350 PF08220 DeoR-like helix-turn-helix domain QR42_13355 PF01479 S4 domain QR42_13355 PF00849 RNA pseudouridylate synthase QR42_13360 PF01943 Polysaccharide biosynthesis protein QR42_13360 PF14667 Polysaccharide biosynthesis C-terminal domain QR42_13375 PF02028 BCCT, betaine/carnitine/choline family transporter QR42_13380 PF03691 Uncharacterised protein family (UPF0167) QR42_13385 PF10957 Sporulation protein Cse60 QR42_13390 PF00581 Rhodanese-like domain QR42_13395 PF04854 Protein of unknown function, DUF624 QR42_13400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QR42_13400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain QR42_13410 PF07470 Glycosyl Hydrolase Family 88 QR42_13415 PF00528 Binding-protein-dependent transport system inner membrane component QR42_13420 PF17853 GGDEF-like domain QR42_13420 PF12833 Helix-turn-helix domain QR42_13425 PF01638 HxlR-like helix-turn-helix QR42_13430 PF07690 Major Facilitator Superfamily QR42_13435 PF00248 Aldo/keto reductase family QR42_13440 PF13416 Bacterial extracellular solute-binding protein QR42_13445 PF00528 Binding-protein-dependent transport system inner membrane component QR42_13450 PF01370 NAD dependent epimerase/dehydratase family QR42_13455 PF01738 Dienelactone hydrolase family QR42_13460 PF13603 Leucyl-tRNA synthetase, Domain 2 QR42_13460 PF00133 tRNA synthetases class I (I, L, M and V) QR42_13460 PF08264 Anticodon-binding domain of tRNA QR42_13460 PF09334 tRNA synthetases class I (M) QR42_13465 PF14074 Protein of unknown function (DUF4257) QR42_13470 PF13426 PAS domain QR42_13470 PF01740 STAS domain QR42_13475 PF04791 LMBR1-like membrane protein QR42_13480 PF02687 FtsX-like permease family QR42_13480 PF12704 MacB-like periplasmic core domain QR42_13485 PF00005 ABC transporter QR42_13495 PF00005 ABC transporter QR42_13500 PF00392 Bacterial regulatory proteins, gntR family QR42_13530 PF10732 Protein of unknown function (DUF2524) QR42_13535 PF16199 Radical_SAM C-terminal domain QR42_13535 PF04055 Radical SAM superfamily QR42_13540 PF06962 Putative rRNA methylase QR42_13545 PF10776 Protein of unknown function (DUF2600) QR42_13550 PF12146 Serine aminopeptidase, S33 QR42_13555 PF00132 Bacterial transferase hexapeptide (six repeats) QR42_13560 PF00733 Asparagine synthase QR42_13560 PF13537 Glutamine amidotransferase domain QR42_13565 PF02773 S-adenosylmethionine synthetase, C-terminal domain QR42_13565 PF02772 S-adenosylmethionine synthetase, central domain QR42_13565 PF00438 S-adenosylmethionine synthetase, N-terminal domain QR42_13570 PF01293 Phosphoenolpyruvate carboxykinase QR42_13575 PF10763 Protein of unknown function (DUF2584) QR42_13580 PF00326 Prolyl oligopeptidase family QR42_13585 PF01593 Flavin containing amine oxidoreductase QR42_13590 PF00535 Glycosyl transferase family 2 QR42_13610 PF00005 ABC transporter QR42_13615 PF00528 Binding-protein-dependent transport system inner membrane component QR42_13620 PF00293 NUDIX domain QR42_13625 PF02342 TerD domain QR42_13640 PF05105 Bacteriophage holin family QR42_13650 PF00210 Ferritin-like domain QR42_13660 PF13115 YtkA-like QR42_13665 PF02664 S-Ribosylhomocysteinase (LuxS) QR42_13670 PF01809 Putative membrane protein insertion efficiency factor QR42_13675 PF00484 Carbonic anhydrase QR42_13680 PF01297 Zinc-uptake complex component A periplasmic QR42_13680 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment QR42_13685 PF01197 Ribosomal protein L31 QR42_13690 PF01654 Cytochrome bd terminal oxidase subunit I QR42_13695 PF02322 Cytochrome bd terminal oxidase subunit II QR42_13700 PF07561 Domain of Unknown Function (DUF1540) QR42_13710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain QR42_13710 PF13378 Enolase C-terminal domain-like QR42_13715 PF00501 AMP-binding enzyme QR42_13715 PF13193 AMP-binding enzyme C-terminal domain QR42_13720 PF00378 Enoyl-CoA hydratase/isomerase QR42_13725 PF00561 alpha/beta hydrolase fold QR42_13730 PF16582 Middle domain of thiamine pyrophosphate QR42_13730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QR42_13730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QR42_13735 PF00425 chorismate binding enzyme QR42_13740 PF01040 UbiA prenyltransferase family QR42_13745 PF01258 Prokaryotic dksA/traR C4-type zinc finger QR42_13750 PF03073 TspO/MBR family QR42_13875 PF09515 Thiamine transporter protein (Thia_YuaJ) QR42_13885 PF00583 Acetyltransferase (GNAT) family QR42_13890 PF01145 SPFH domain / Band 7 family QR42_13890 PF15975 Flotillin QR42_13900 PF12867 DinB superfamily QR42_13905 PF00465 Iron-containing alcohol dehydrogenase QR42_13930 PF01471 Putative peptidoglycan binding domain QR42_13930 PF01510 N-acetylmuramoyl-L-alanine amidase QR42_13935 PF04688 SPP1 phage holin QR42_13940 PF10960 BhlA holin family QR42_13960 PF09693 Phage uncharacterised protein (Phage_XkdX) QR42_13965 PF09636 XkdW protein QR42_13980 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) QR42_13985 PF04865 Baseplate J-like protein QR42_13990 PF10934 Protein of unknown function (DUF2634) QR42_13995 PF10844 Protein of unknown function (DUF2577) QR42_14005 PF01476 LysM domain QR42_14010 PF01464 Transglycosylase SLT domain QR42_14010 PF01464 Transglycosylase SLT domain QR42_14015 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC QR42_14025 PF09393 Phage tail tube protein QR42_14030 PF17481 Phage tail sheath protein beta-sandwich domain QR42_14030 PF17482 Phage tail sheath C-terminal domain QR42_14030 PF04984 Phage tail sheath protein subtilisin-like domain QR42_14045 PF04883 Bacteriophage HK97-gp10, putative tail-component QR42_14050 PF12206 Domain of unknown function (DUF3599) QR42_14055 PF11436 Protein of unknown function (DUF3199) QR42_14060 PF05065 Phage capsid family QR42_14065 PF14550 Putative phage serine protease XkdF QR42_14070 PF04860 Phage portal protein QR42_14075 PF04466 Phage terminase large subunit QR42_14075 PF17288 Terminase RNAseH like domain QR42_14080 PF10668 Phage terminase small subunit QR42_14085 PF08281 Sigma-70, region 4 QR42_14090 PF17356 Phage-like element PBSX protein XtrA QR42_14095 PF05866 Endodeoxyribonuclease RusA QR42_14110 PF01381 Helix-turn-helix QR42_14120 PF06968 Biotin and Thiamin Synthesis associated domain QR42_14120 PF04055 Radical SAM superfamily QR42_14130 PF02673 Bacitracin resistance protein BacA QR42_14135 PF01594 AI-2E family transporter QR42_14145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain QR42_14145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QR42_14150 PF01965 DJ-1/PfpI family QR42_14155 PF02743 Cache domain QR42_14155 PF00672 HAMP domain QR42_14155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_14160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_14160 PF00672 HAMP domain QR42_14160 PF02743 Cache domain QR42_14165 PF00672 HAMP domain QR42_14165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_14165 PF02743 Cache domain QR42_14170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_14170 PF00672 HAMP domain QR42_14170 PF02743 Cache domain QR42_14185 PF03060 Nitronate monooxygenase QR42_14190 PF01894 Uncharacterised protein family UPF0047 QR42_14195 PF00571 CBS domain QR42_14195 PF03471 Transporter associated domain QR42_14195 PF01595 Cyclin M transmembrane N-terminal domain QR42_14200 PF04298 Putative neutral zinc metallopeptidase QR42_14210 PF07885 Ion channel QR42_14210 PF02254 TrkA-N domain QR42_14215 PF08868 YugN-like family QR42_14225 PF00342 Phosphoglucose isomerase QR42_14230 PF00465 Iron-containing alcohol dehydrogenase QR42_14235 PF00465 Iron-containing alcohol dehydrogenase QR42_14240 PF04070 Domain of unknown function (DUF378) QR42_14245 PF00575 S1 RNA binding domain QR42_14250 PF00155 Aminotransferase class I and II QR42_14255 PF01037 Lrp/AsnC ligand binding domain QR42_14260 PF08386 TAP-like protein QR42_14260 PF00561 alpha/beta hydrolase fold QR42_14265 PF08958 Domain of unknown function (DUF1871) QR42_14270 PF00155 Aminotransferase class I and II QR42_14275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_14275 PF00512 His Kinase A (phospho-acceptor) domain QR42_14280 PF08810 Kinase associated protein B QR42_14285 PF00929 Exonuclease QR42_14290 PF07690 Major Facilitator Superfamily QR42_14295 PF00905 Penicillin binding protein transpeptidase domain QR42_14295 PF00912 Transglycosylase QR42_14300 PF04134 Protein of unknown function, DUF393 QR42_14305 PF17328 Family of unknown function (DUF5366) QR42_14310 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain QR42_14310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_14310 PF00989 PAS fold QR42_14310 PF17203 Single cache domain 3 QR42_14315 PF00072 Response regulator receiver domain QR42_14340 PF03390 2-hydroxycarboxylate transporter family QR42_14350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus QR42_14350 PF00361 Proton-conducting membrane transporter QR42_14350 PF13244 Domain of unknown function (DUF4040) QR42_14355 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter QR42_14360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L QR42_14365 PF00361 Proton-conducting membrane transporter QR42_14370 PF01899 Na+/H+ ion antiporter subunit QR42_14375 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) QR42_14380 PF03334 Na+/H+ antiporter subunit QR42_14385 PF03061 Thioesterase superfamily QR42_14390 PF00196 Bacterial regulatory proteins, luxR family QR42_14390 PF00072 Response regulator receiver domain QR42_14395 PF07730 Histidine kinase QR42_14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_14405 PF00348 Polyprenyl synthetase QR42_14410 PF08181 DegQ (SacQ) family QR42_14420 PF00563 EAL domain QR42_14420 PF08668 HDOD domain QR42_14425 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain QR42_14425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain QR42_14425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family QR42_14430 PF00857 Isochorismatase family QR42_14435 PF07997 Protein of unknown function (DUF1694) QR42_14440 PF14166 YueH-like protein QR42_14445 PF10676 Spore germination protein gerPA/gerPF QR42_14450 PF10676 Spore germination protein gerPA/gerPF QR42_14455 PF01594 AI-2E family transporter QR42_14460 PF10842 Protein of unknown function (DUF2642) QR42_14470 PF01966 HD domain QR42_14475 PF00106 short chain dehydrogenase QR42_14480 PF17355 Family of unknown function (DUF5383) QR42_14490 PF01580 FtsK/SpoIIIE family QR42_14490 PF12538 DNA transporter QR42_14495 PF10140 WXG100 protein secretion system (Wss), protein YukC QR42_14500 PF08817 WXG100 protein secretion system (Wss), protein YukD QR42_14505 PF06013 Proteins of 100 residues with WXG QR42_14510 PF13556 PucR C-terminal helix-turn-helix domain QR42_14510 PF17853 GGDEF-like domain QR42_14510 PF06018 CodY GAF-like domain QR42_14515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain QR42_14515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain QR42_14520 PF02632 BioY family QR42_14525 PF07070 SpoOM protein QR42_14530 PF03553 Na+/H+ antiporter family QR42_14530 PF13726 Na+-H+ antiporter family QR42_14535 PF00883 Cytosol aminopeptidase family, catalytic domain QR42_14535 PF02789 Cytosol aminopeptidase family, N-terminal domain QR42_14540 PF02681 Divergent PAP2 family QR42_14545 PF06725 3D domain QR42_14550 PF14068 Putative membrane protein QR42_14555 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_14560 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_14570 PF07739 TipAS antibiotic-recognition domain QR42_14570 PF13411 MerR HTH family regulatory protein QR42_14575 PF01521 Iron-sulphur cluster biosynthesis QR42_14580 PF01678 Diaminopimelate epimerase QR42_14585 PF07293 Protein of unknown function (DUF1450) QR42_14590 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_14600 PF07315 Protein of unknown function (DUF1462) QR42_14605 PF01106 NifU-like domain QR42_14610 PF00326 Prolyl oligopeptidase family QR42_14610 PF07676 WD40-like Beta Propeller Repeat QR42_14615 PF00288 GHMP kinases N terminal domain QR42_14615 PF08544 GHMP kinases C terminal QR42_14620 PF00291 Pyridoxal-phosphate dependent enzyme QR42_14625 PF00742 Homoserine dehydrogenase QR42_14625 PF01842 ACT domain QR42_14625 PF03447 Homoserine dehydrogenase, NAD binding domain QR42_14630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QR42_14630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain QR42_14640 PF04608 Phosphatidylglycerophosphatase A QR42_14645 PF13344 Haloacid dehalogenase-like hydrolase QR42_14650 PF01934 Protein of unknown function DUF86 QR42_14655 PF06265 Protein of unknown function (DUF1027) QR42_14660 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) QR42_14665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family QR42_14665 PF04055 Radical SAM superfamily QR42_14670 PF01551 Peptidase family M23 QR42_14675 PF09560 Sporulation protein YunB (Spo_YunB) QR42_14680 PF08827 Domain of unknown function (DUF1805) QR42_14685 PF02872 5'-nucleotidase, C-terminal domain QR42_14690 PF01904 Protein of unknown function DUF72 QR42_14695 PF07905 Purine catabolism regulatory protein-like family QR42_14695 PF13556 PucR C-terminal helix-turn-helix domain QR42_14695 PF17853 GGDEF-like domain QR42_14700 PF00190 Cupin QR42_14710 PF07690 Major Facilitator Superfamily QR42_14715 PF00266 Aminotransferase class-V QR42_14720 PF04231 Endonuclease I QR42_14730 PF01032 FecCD transport family QR42_14735 PF01032 FecCD transport family QR42_14740 PF01497 Periplasmic binding protein QR42_14750 PF06146 Phosphate-starvation-inducible E QR42_14755 PF00512 His Kinase A (phospho-acceptor) domain QR42_14760 PF00486 Transcriptional regulatory protein, C terminal QR42_14760 PF00072 Response regulator receiver domain QR42_14765 PF04235 Protein of unknown function (DUF418) QR42_14775 PF02525 Flavodoxin-like fold QR42_14780 PF01370 NAD dependent epimerase/dehydratase family QR42_14780 PF08338 Domain of unknown function (DUF1731) QR42_14785 PF18665 Tetracyclin repressor-like, C-terminal domain QR42_14785 PF00440 Bacterial regulatory proteins, tetR family QR42_14800 PF02384 N-6 DNA Methylase QR42_14815 PF01458 Uncharacterized protein family (UPF0051) QR42_14820 PF01592 NifU-like N terminal domain QR42_14825 PF00266 Aminotransferase class-V QR42_14830 PF01458 Uncharacterized protein family (UPF0051) QR42_14835 PF00005 ABC transporter QR42_14840 PF02627 Carboxymuconolactone decarboxylase family QR42_14845 PF03180 NLPA lipoprotein QR42_14850 PF00528 Binding-protein-dependent transport system inner membrane component QR42_14855 PF00005 ABC transporter QR42_14855 PF09383 NIL domain QR42_14860 PF02036 SCP-2 sterol transfer family QR42_14865 PF00085 Thioredoxin QR42_14870 PF01751 Toprim domain QR42_14875 PF10830 Protein of unknown function (DUF2553) QR42_14880 PF01597 Glycine cleavage H-protein QR42_14885 PF03960 ArsC family QR42_14890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain QR42_14890 PF02770 Acyl-CoA dehydrogenase, middle domain QR42_14890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain QR42_14895 PF02803 Thiolase, C-terminal domain QR42_14895 PF00108 Thiolase, N-terminal domain QR42_14900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain QR42_14900 PF00378 Enoyl-CoA hydratase/isomerase QR42_14900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain QR42_14910 PF07875 Coat F domain QR42_14915 PF10835 Protein of unknown function (DUF2573) QR42_14920 PF00005 ABC transporter QR42_14930 PF00106 short chain dehydrogenase QR42_14935 PF13180 PDZ domain QR42_14940 PF00072 Response regulator receiver domain QR42_14940 PF00486 Transcriptional regulatory protein, C terminal QR42_14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_14945 PF00512 His Kinase A (phospho-acceptor) domain QR42_14945 PF00672 HAMP domain QR42_14950 PF00440 Bacterial regulatory proteins, tetR family QR42_14955 PF10415 Fumarase C C-terminus QR42_14955 PF00206 Lyase QR42_14960 PF03323 Bacillus/Clostridium GerA spore germination protein QR42_14965 PF03845 Spore germination protein QR42_14970 PF05504 Spore germination B3/ GerAC like, C-terminal QR42_14980 PF00072 Response regulator receiver domain QR42_14980 PF00196 Bacterial regulatory proteins, luxR family QR42_14985 PF00672 HAMP domain QR42_14985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_14985 PF07730 Histidine kinase QR42_14990 PF09922 Cell wall-active antibiotics response 4TMS YvqF QR42_15000 PF04012 PspA/IM30 family QR42_15010 PF02311 AraC-like ligand binding domain QR42_15010 PF12833 Helix-turn-helix domain QR42_15020 PF01497 Periplasmic binding protein QR42_15025 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_15030 PF01923 Cobalamin adenosyltransferase QR42_15040 PF00005 ABC transporter QR42_15045 PF01032 FecCD transport family QR42_15050 PF01497 Periplasmic binding protein QR42_15055 PF00295 Glycosyl hydrolases family 28 QR42_15060 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus QR42_15060 PF08666 SAF domain QR42_15065 PF08125 Mannitol dehydrogenase C-terminal domain QR42_15065 PF01232 Mannitol dehydrogenase Rossmann domain QR42_15070 PF00356 Bacterial regulatory proteins, lacI family QR42_15075 PF02614 Glucuronate isomerase QR42_15080 PF00512 His Kinase A (phospho-acceptor) domain QR42_15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_15085 PF00072 Response regulator receiver domain QR42_15085 PF00486 Transcriptional regulatory protein, C terminal QR42_15090 PF00005 ABC transporter QR42_15095 PF01032 FecCD transport family QR42_15100 PF01032 FecCD transport family QR42_15105 PF01497 Periplasmic binding protein QR42_15110 PF13520 Amino acid permease QR42_15115 PF09575 Small spore protein J (Spore_SspJ) QR42_15125 PF04307 LexA-binding, inner membrane-associated putative hydrolase QR42_15130 PF00884 Sulfatase QR42_15140 PF00528 Binding-protein-dependent transport system inner membrane component QR42_15145 PF00248 Aldo/keto reductase family QR42_15150 PF00480 ROK family QR42_15155 PF00999 Sodium/hydrogen exchanger family QR42_15160 PF03458 UPF0126 domain QR42_15165 PF02600 Disulfide bond formation protein DsbB QR42_15170 PF13462 Thioredoxin QR42_15175 PF00403 Heavy-metal-associated domain QR42_15180 PF00005 ABC transporter QR42_15185 PF00950 ABC 3 transport family QR42_15190 PF01297 Zinc-uptake complex component A periplasmic QR42_15200 PF00440 Bacterial regulatory proteins, tetR family QR42_15200 PF13977 BetI-type transcriptional repressor, C-terminal QR42_15205 PF00072 Response regulator receiver domain QR42_15205 PF08664 YcbB domain QR42_15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_15215 PF10415 Fumarase C C-terminus QR42_15215 PF00206 Lyase QR42_15220 PF00375 Sodium:dicarboxylate symporter family QR42_15225 PF00403 Heavy-metal-associated domain QR42_15230 PF00403 Heavy-metal-associated domain QR42_15235 PF02583 Metal-sensitive transcriptional repressor QR42_15245 PF00072 Response regulator receiver domain QR42_15245 PF00990 Diguanylate cyclase, GGDEF domain QR42_15275 PF01668 SmpB protein QR42_15280 PF00773 RNB domain QR42_15280 PF00575 S1 RNA binding domain QR42_15280 PF08206 Ribonuclease B OB domain QR42_15280 PF17876 Cold shock domain QR42_15285 PF12146 Serine aminopeptidase, S33 QR42_15290 PF03840 Preprotein translocase SecG subunit QR42_15295 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin QR42_15295 PF18277 AbrB C-terminal domain QR42_15300 PF01381 Helix-turn-helix QR42_15315 PF01638 HxlR-like helix-turn-helix QR42_15320 PF00528 Binding-protein-dependent transport system inner membrane component QR42_15325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system QR42_15330 PF00528 Binding-protein-dependent transport system inner membrane component QR42_15335 PF00005 ABC transporter QR42_15335 PF00571 CBS domain QR42_15340 PF12802 MarR family QR42_15345 PF01914 MarC family integral membrane protein QR42_15355 PF00583 Acetyltransferase (GNAT) family QR42_15375 PF00005 ABC transporter QR42_15385 PF03952 Enolase, N-terminal domain QR42_15385 PF00113 Enolase, C-terminal TIM barrel domain QR42_15390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) QR42_15390 PF01676 Metalloenzyme superfamily QR42_15395 PF00121 Triosephosphate isomerase QR42_15400 PF00162 Phosphoglycerate kinase QR42_15405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain QR42_15405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain QR42_15410 PF04198 Putative sugar-binding domain QR42_15420 PF00324 Amino acid permease QR42_15425 PF00202 Aminotransferase class-III QR42_15430 PF02954 Bacterial regulatory protein, Fis family QR42_15430 PF00158 Sigma-54 interaction domain QR42_15430 PF13426 PAS domain QR42_15435 PF07729 FCD domain QR42_15435 PF00392 Bacterial regulatory proteins, gntR family QR42_15440 PF04552 Sigma-54, DNA binding domain QR42_15440 PF00309 Sigma-54 factor, Activator interacting domain (AID) QR42_15440 PF04963 Sigma-54 factor, core binding domain QR42_15445 PF09628 YvfG protein QR42_15450 PF01554 MatE QR42_15455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_15455 PF00005 ABC transporter QR42_15460 PF00005 ABC transporter QR42_15460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_15465 PF00528 Binding-protein-dependent transport system inner membrane component QR42_15470 PF00528 Binding-protein-dependent transport system inner membrane component QR42_15475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QR42_15480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family QR42_15485 PF00132 Bacterial transferase hexapeptide (six repeats) QR42_15485 PF17836 PglD N-terminal domain QR42_15490 PF02397 Bacterial sugar transferase QR42_15495 PF01943 Polysaccharide biosynthesis protein QR42_15495 PF14667 Polysaccharide biosynthesis C-terminal domain QR42_15500 PF04230 Polysaccharide pyruvyl transferase QR42_15505 PF00535 Glycosyl transferase family 2 QR42_15515 PF13439 Glycosyltransferase Family 4 QR42_15515 PF00534 Glycosyl transferases group 1 QR42_15520 PF00535 Glycosyl transferase family 2 QR42_15525 PF13439 Glycosyltransferase Family 4 QR42_15525 PF00534 Glycosyl transferases group 1 QR42_15530 PF02719 Polysaccharide biosynthesis protein QR42_15535 PF13614 AAA domain QR42_15540 PF02706 Chain length determinant protein QR42_15545 PF08671 Anti-repressor SinI QR42_15545 PF01381 Helix-turn-helix QR42_15555 PF01497 Periplasmic binding protein QR42_15560 PF01032 FecCD transport family QR42_15565 PF01032 FecCD transport family QR42_15570 PF01522 Polysaccharide deacetylase QR42_15570 PF13739 Deacetylase PdaC QR42_15570 PF11738 Protein of unknown function (DUF3298) QR42_15580 PF00005 ABC transporter QR42_15585 PF00005 ABC transporter QR42_15585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region QR42_15590 PF12911 N-terminal TM domain of oligopeptide transport permease C QR42_15590 PF00528 Binding-protein-dependent transport system inner membrane component QR42_15595 PF00528 Binding-protein-dependent transport system inner membrane component QR42_15600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle QR42_15605 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase QR42_15610 PF01497 Periplasmic binding protein QR42_15630 PF00574 Clp protease QR42_15635 PF03641 Possible lysine decarboxylase QR42_15640 PF03819 MazG nucleotide pyrophosphohydrolase domain QR42_15645 PF01740 STAS domain QR42_15645 PF00916 Sulfate permease family QR42_15650 PF00484 Carbonic anhydrase QR42_15655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain QR42_15655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain QR42_15660 PF00545 ribonuclease QR42_15665 PF00797 N-acetyltransferase QR42_15670 PF00381 PTS HPr component phosphorylation site QR42_15675 PF10298 WhiA N-terminal LAGLIDADG-like domain QR42_15675 PF14527 WhiA LAGLIDADG-like domain QR42_15675 PF02650 WhiA C-terminal HTH domain QR42_15680 PF01933 Uncharacterised protein family UPF0052 QR42_15685 PF03668 P-loop ATPase protein family QR42_15690 PF00293 NUDIX domain QR42_15695 PF07992 Pyridine nucleotide-disulphide oxidoreductase QR42_15700 PF00877 NlpC/P60 family QR42_15710 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase QR42_15710 PF01502 Phosphoribosyl-AMP cyclohydrolase QR42_15715 PF00977 Histidine biosynthesis protein QR42_15720 PF00977 Histidine biosynthesis protein QR42_15725 PF00117 Glutamine amidotransferase class-I QR42_15730 PF00475 Imidazoleglycerol-phosphate dehydratase QR42_15735 PF00815 Histidinol dehydrogenase QR42_15740 PF01634 ATP phosphoribosyltransferase QR42_15745 PF13393 Histidyl-tRNA synthetase QR42_15750 PF13529 Peptidase_C39 like family QR42_15760 PF13460 NAD(P)H-binding QR42_15765 PF02082 Transcriptional regulator QR42_15770 PF14602 Hexapeptide repeat of succinyl-transferase QR42_15775 PF13419 Haloacid dehalogenase-like hydrolase QR42_15780 PF07670 Nucleoside recognition QR42_15785 PF01790 Prolipoprotein diacylglyceryl transferase QR42_15790 PF07475 HPr Serine kinase C-terminal domain QR42_15790 PF02603 HPr Serine kinase N terminus QR42_15795 PF01979 Amidohydrolase family QR42_15800 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase QR42_15810 PF00149 Calcineurin-like phosphoesterase QR42_15815 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV QR42_15820 PF04024 PspC domain QR42_15825 PF13349 Putative adhesin QR42_15840 PF17760 UvrA interaction domain QR42_15840 PF00005 ABC transporter QR42_15840 PF17755 UvrA DNA-binding domain QR42_15845 PF17757 UvrB interaction domain QR42_15845 PF12344 Ultra-violet resistance protein B QR42_15845 PF00271 Helicase conserved C-terminal domain QR42_15845 PF04851 Type III restriction enzyme, res subunit QR42_15845 PF02151 UvrB/uvrC motif QR42_15850 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) QR42_15860 PF00391 PEP-utilising enzyme, mobile domain QR42_15860 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain QR42_15865 PF00440 Bacterial regulatory proteins, tetR family QR42_15870 PF07690 Major Facilitator Superfamily QR42_15880 PF00486 Transcriptional regulatory protein, C terminal QR42_15880 PF00072 Response regulator receiver domain QR42_15885 PF16736 Single Cache-like QR42_15885 PF00989 PAS fold QR42_15885 PF00512 His Kinase A (phospho-acceptor) domain QR42_15885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_15890 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase QR42_15895 PF00535 Glycosyl transferase family 2 QR42_15900 PF00324 Amino acid permease QR42_15905 PF00881 Nitroreductase family QR42_15910 PF01638 HxlR-like helix-turn-helix QR42_15915 PF17820 PDZ domain QR42_15920 PF17423 Swarming motility protein QR42_15925 PF17820 PDZ domain QR42_15925 PF01471 Putative peptidoglycan binding domain QR42_15925 PF03572 Peptidase family S41 QR42_15930 PF01925 Sulfite exporter TauE/SafE QR42_15935 PF00877 NlpC/P60 family QR42_15940 PF18075 FtsX extracellular domain QR42_15940 PF02687 FtsX-like permease family QR42_15945 PF00005 ABC transporter QR42_15950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III QR42_15955 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) QR42_15955 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 QR42_15970 PF03462 PCRF domain QR42_15970 PF00472 RF-1 domain QR42_15975 PF02810 SEC-C motif QR42_15975 PF07517 SecA DEAD-like domain QR42_15975 PF01043 SecA preprotein cross-linking domain QR42_15975 PF07516 SecA Wing and Scaffold domain QR42_15980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein QR42_15980 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus QR42_15985 PF02743 Cache domain QR42_15985 PF00672 HAMP domain QR42_15985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_16000 PF02561 Flagellar protein FliS QR42_16005 PF07196 Flagellin hook IN motif QR42_16005 PF07195 Flagellar hook-associated protein 2 C-terminus QR42_16005 PF02465 Flagellar hook-associated protein 2 N-terminus QR42_16010 PF03646 FlaG protein QR42_16015 PF02599 Global regulator protein family QR42_16020 PF02623 FliW protein QR42_16030 PF00700 Bacterial flagellin C-terminal helical region QR42_16030 PF00669 Bacterial flagellin N-terminal helical region QR42_16035 PF00460 Flagella basal body rod protein QR42_16035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QR42_16040 PF05130 FlgN protein QR42_16060 PF10719 Late competence development protein ComFB QR42_16065 PF04851 Type III restriction enzyme, res subunit QR42_16065 PF00271 Helicase conserved C-terminal domain QR42_16070 PF02645 Uncharacterised protein, DegV family COG1307 QR42_16075 PF00196 Bacterial regulatory proteins, luxR family QR42_16075 PF00072 Response regulator receiver domain QR42_16080 PF05384 Sensor protein DegS QR42_16080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_16080 PF07730 Histidine kinase QR42_16085 PF09186 Domain of unknown function (DUF1949) QR42_16085 PF01205 Uncharacterized protein family UPF0029 QR42_16090 PF03816 Cell envelope-related transcriptional attenuator domain QR42_16095 PF00953 Glycosyl transferase family 4 QR42_16105 PF00535 Glycosyl transferase family 2 QR42_16110 PF02706 Chain length determinant protein QR42_16115 PF04932 O-Antigen ligase QR42_16120 PF16363 GDP-mannose 4,6 dehydratase QR42_16125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain QR42_16125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain QR42_16125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain QR42_16130 PF00534 Glycosyl transferases group 1 QR42_16130 PF13439 Glycosyltransferase Family 4 QR42_16135 PF01943 Polysaccharide biosynthesis protein QR42_16135 PF14667 Polysaccharide biosynthesis C-terminal domain QR42_16140 PF02397 Bacterial sugar transferase QR42_16150 PF01520 N-acetylmuramoyl-L-alanine amidase QR42_16150 PF04122 Putative cell wall binding repeat 2 QR42_16155 PF08486 Stage II sporulation protein QR42_16155 PF04122 Putative cell wall binding repeat 2 QR42_16165 PF03816 Cell envelope-related transcriptional attenuator domain QR42_16170 PF02350 UDP-N-acetylglucosamine 2-epimerase QR42_16175 PF00483 Nucleotidyl transferase QR42_16180 PF00005 ABC transporter QR42_16185 PF01061 ABC-2 type transporter QR42_16190 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain QR42_16190 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain QR42_16190 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain QR42_16225 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase QR42_16235 PF01467 Cytidylyltransferase-like QR42_16240 PF03808 Glycosyl transferase WecB/TagA/CpsF family QR42_16245 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase QR42_16250 PF05036 Sporulation related domain QR42_16250 PF08239 Bacterial SH3 domain QR42_16250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase QR42_16255 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase QR42_16255 PF00535 Glycosyl transferase family 2 QR42_16260 PF01238 Phosphomannose isomerase type I QR42_16265 PF00528 Binding-protein-dependent transport system inner membrane component QR42_16270 PF00528 Binding-protein-dependent transport system inner membrane component QR42_16275 PF01547 Bacterial extracellular solute-binding protein QR42_16280 PF00196 Bacterial regulatory proteins, luxR family QR42_16280 PF00072 Response regulator receiver domain QR42_16285 PF00672 HAMP domain QR42_16285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_16285 PF06580 Histidine kinase QR42_16285 PF02743 Cache domain QR42_16295 PF00583 Acetyltransferase (GNAT) family QR42_16300 PF01081 KDPG and KHG aldolase QR42_16305 PF00294 pfkB family carbohydrate kinase QR42_16310 PF00356 Bacterial regulatory proteins, lacI family QR42_16315 PF04962 KduI/IolB family QR42_16325 PF03323 Bacillus/Clostridium GerA spore germination protein QR42_16330 PF03845 Spore germination protein QR42_16335 PF05504 Spore germination B3/ GerAC like, C-terminal QR42_16340 PF00534 Glycosyl transferases group 1 QR42_16340 PF00535 Glycosyl transferase family 2 QR42_16345 PF00083 Sugar (and other) transporter QR42_16350 PF03816 Cell envelope-related transcriptional attenuator domain QR42_16360 PF00877 NlpC/P60 family QR42_16365 PF09587 Bacterial capsule synthesis protein PGA_cap QR42_16370 PF14102 Capsule biosynthesis CapC QR42_16375 PF08245 Mur ligase middle domain QR42_16380 PF03323 Bacillus/Clostridium GerA spore germination protein QR42_16390 PF05504 Spore germination B3/ GerAC like, C-terminal QR42_16395 PF00356 Bacterial regulatory proteins, lacI family QR42_16400 PF00294 pfkB family carbohydrate kinase QR42_16405 PF05025 RbsD / FucU transport protein family QR42_16410 PF00005 ABC transporter QR42_16415 PF02653 Branched-chain amino acid transport system / permease component QR42_16420 PF13407 Periplasmic binding protein domain QR42_16425 PF01613 Flavin reductase like domain QR42_16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_16430 PF03466 LysR substrate binding domain QR42_16435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QR42_16435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain QR42_16435 PF00205 Thiamine pyrophosphate enzyme, central domain QR42_16440 PF03306 Alpha-acetolactate decarboxylase QR42_16445 PF01037 Lrp/AsnC ligand binding domain QR42_16445 PF13404 AsnC-type helix-turn-helix domain QR42_16450 PF02417 Chromate transporter QR42_16455 PF02417 Chromate transporter QR42_16460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain QR42_16460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain QR42_16460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain QR42_16465 PF04434 SWIM zinc finger QR42_16470 PF00271 Helicase conserved C-terminal domain QR42_16470 PF12419 SNF2 Helicase protein QR42_16470 PF00176 SNF2 family N-terminal domain QR42_16475 PF01740 STAS domain QR42_16475 PF13426 PAS domain QR42_16490 PF14183 YwpF-like protein QR42_16495 PF01741 Large-conductance mechanosensitive channel, MscL QR42_16500 PF07977 FabA-like domain QR42_16505 PF18801 response regulator aspartate phosphatase H, N terminal QR42_16510 PF00460 Flagella basal body rod protein QR42_16510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QR42_16515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal QR42_16515 PF00460 Flagella basal body rod protein QR42_16525 PF12116 Stage III sporulation protein D QR42_16530 PF01047 MarR family QR42_16535 PF07690 Major Facilitator Superfamily QR42_16540 PF01569 PAP2 superfamily QR42_16545 PF07690 Major Facilitator Superfamily QR42_16550 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_16560 PF00005 ABC transporter QR42_16565 PF00909 Ammonium Transporter Family QR42_16570 PF00543 Nitrogen regulatory protein P-II QR42_16575 PF01551 Peptidase family M23 QR42_16580 PF00583 Acetyltransferase (GNAT) family QR42_16595 PF00005 ABC transporter QR42_16615 PF00471 Ribosomal protein L33 QR42_16620 PF02492 CobW/HypB/UreG, nucleotide-binding domain QR42_16620 PF07683 Cobalamin synthesis protein cobW C-terminal domain QR42_16625 PF00253 Ribosomal protein S14p/S29e QR42_16630 PF06463 Molybdenum Cofactor Synthesis C QR42_16630 PF04055 Radical SAM superfamily QR42_16635 PF02634 FdhD/NarQ family QR42_16640 PF07690 Major Facilitator Superfamily QR42_16645 PF00384 Molybdopterin oxidoreductase QR42_16650 PF00092 von Willebrand factor type A domain QR42_16655 PF00092 von Willebrand factor type A domain QR42_16660 PF08486 Stage II sporulation protein QR42_16665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) QR42_16670 PF08680 TATA-box binding QR42_16675 PF06612 Protein of unknown function (DUF1146) QR42_16685 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain QR42_16685 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain QR42_16690 PF02874 ATP synthase alpha/beta family, beta-barrel domain QR42_16690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QR42_16695 PF00231 ATP synthase QR42_16700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QR42_16700 PF00306 ATP synthase alpha/beta chain, C terminal domain QR42_16700 PF02874 ATP synthase alpha/beta family, beta-barrel domain QR42_16705 PF00213 ATP synthase delta (OSCP) subunit QR42_16710 PF00430 ATP synthase B/B' CF(0) QR42_16715 PF00137 ATP synthase subunit C QR42_16720 PF00119 ATP synthase A chain QR42_16725 PF03899 ATP synthase I chain QR42_16740 PF00464 Serine hydroxymethyltransferase QR42_16745 PF04260 Protein of unknown function (DUF436) QR42_16750 PF02502 Ribose/Galactose Isomerase QR42_16755 PF01451 Low molecular weight phosphotyrosine protein phosphatase QR42_16760 PF02659 Putative manganese efflux pump QR42_16765 PF03481 Putative GTP-binding controlling metal-binding QR42_16765 PF01300 Telomere recombination QR42_16775 PF09551 Stage II sporulation protein R (spore_II_R) QR42_16785 PF05175 Methyltransferase small domain QR42_16785 PF17827 PrmC N-terminal domain QR42_16790 PF00472 RF-1 domain QR42_16790 PF03462 PCRF domain QR42_16795 PF13411 MerR HTH family regulatory protein QR42_16800 PF03547 Membrane transport protein QR42_16805 PF00390 Malic enzyme, N-terminal domain QR42_16805 PF03949 Malic enzyme, NAD binding domain QR42_16810 PF00265 Thymidine kinase QR42_16815 PF01197 Ribosomal protein L31 QR42_16820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain QR42_16820 PF07497 Rho termination factor, RNA-binding domain QR42_16820 PF07498 Rho termination factor, N-terminal domain QR42_16825 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded QR42_16830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) QR42_16835 PF00923 Transaldolase/Fructose-6-phosphate aldolase QR42_16840 PF01116 Fructose-bisphosphate aldolase class-II QR42_16845 PF00072 Response regulator receiver domain QR42_16850 PF10740 Domain of unknown function (DUF2529) QR42_16855 PF06418 CTP synthase N-terminus QR42_16855 PF00117 Glutamine amidotransferase class-I QR42_16860 PF05066 HB1, ASXL, restriction endonuclease HTH domain QR42_16870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain QR42_16870 PF02770 Acyl-CoA dehydrogenase, middle domain QR42_16870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain QR42_16875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain QR42_16875 PF02770 Acyl-CoA dehydrogenase, middle domain QR42_16875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain QR42_16880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain QR42_16880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain QR42_16885 PF02803 Thiolase, C-terminal domain QR42_16885 PF00108 Thiolase, N-terminal domain QR42_16890 PF13183 4Fe-4S dicluster domain QR42_16890 PF02754 Cysteine-rich domain QR42_16895 PF13091 PLD-like domain QR42_16900 PF03851 UV-endonuclease UvdE QR42_16910 PF02016 LD-carboxypeptidase N-terminal domain QR42_16910 PF17676 LD-carboxypeptidase C-terminal domain QR42_16920 PF00664 ABC transporter transmembrane region QR42_16920 PF00005 ABC transporter QR42_16925 PF13091 PLD-like domain QR42_16925 PF13396 Phospholipase_D-nuclease N-terminal QR42_16930 PF02016 LD-carboxypeptidase N-terminal domain QR42_16930 PF17676 LD-carboxypeptidase C-terminal domain QR42_16935 PF05746 DALR anticodon binding domain QR42_16935 PF03485 Arginyl tRNA synthetase N terminal domain QR42_16935 PF00750 tRNA synthetases class I (R) QR42_16940 PF09148 Domain of unknown function (DUF1934) QR42_16955 PF00491 Arginase family QR42_16960 PF17284 Spermidine synthase tetramerisation domain QR42_16965 PF00905 Penicillin binding protein transpeptidase domain QR42_16965 PF00912 Transglycosylase QR42_16970 PF08741 YwhD family QR42_16975 PF02163 Peptidase family M50 QR42_16980 PF01361 Tautomerase enzyme QR42_16990 PF00296 Luciferase-like monooxygenase QR42_16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_16995 PF03466 LysR substrate binding domain QR42_17000 PF03358 NADPH-dependent FMN reductase QR42_17005 PF00296 Luciferase-like monooxygenase QR42_17010 PF00462 Glutaredoxin QR42_17015 PF00583 Acetyltransferase (GNAT) family QR42_17020 PF00528 Binding-protein-dependent transport system inner membrane component QR42_17025 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_17030 PF00528 Binding-protein-dependent transport system inner membrane component QR42_17035 PF00005 ABC transporter QR42_17045 PF01966 HD domain QR42_17050 PF07293 Protein of unknown function (DUF1450) QR42_17065 PF00535 Glycosyl transferase family 2 QR42_17065 PF07238 PilZ domain QR42_17075 PF03099 Biotin/lipoate A/B protein ligase family QR42_17095 PF14449 Pre-toxin TG QR42_17095 PF04740 LXG domain of WXG superfamily QR42_17105 PF16888 Domain of unknown function (DUF5082) QR42_17125 PF03737 Aldolase/RraA QR42_17135 PF01515 Phosphate acetyl/butaryl transferase QR42_17145 PF07690 Major Facilitator Superfamily QR42_17150 PF01037 Lrp/AsnC ligand binding domain QR42_17155 PF07690 Major Facilitator Superfamily QR42_17165 PF07883 Cupin domain QR42_17180 PF00155 Aminotransferase class I and II QR42_17190 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase QR42_17195 PF04321 RmlD substrate binding domain QR42_17200 PF16363 GDP-mannose 4,6 dehydratase QR42_17205 PF00483 Nucleotidyl transferase QR42_17210 PF04101 Glycosyltransferase family 28 C-terminal domain QR42_17215 PF02348 Cytidylyltransferase QR42_17220 PF03102 NeuB family QR42_17220 PF08666 SAF domain QR42_17225 PF00583 Acetyltransferase (GNAT) family QR42_17230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family QR42_17235 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase QR42_17240 PF00535 Glycosyl transferase family 2 QR42_17250 PF09671 Spore coat protein (Spore_GerQ) QR42_17260 PF04241 Protein of unknown function (DUF423) QR42_17265 PF00860 Permease family QR42_17270 PF17261 Family of unknown function (DUF5327) QR42_17275 PF00171 Aldehyde dehydrogenase family QR42_17280 PF03167 Uracil DNA glycosylase superfamily QR42_17285 PF00535 Glycosyl transferase family 2 QR42_17295 PF08543 Phosphomethylpyrimidine kinase QR42_17310 PF07690 Major Facilitator Superfamily QR42_17315 PF01979 Amidohydrolase family QR42_17320 PF00251 Glycosyl hydrolases family 32 N-terminal domain QR42_17320 PF08244 Glycosyl hydrolases family 32 C terminal QR42_17325 PF02378 Phosphotransferase system, EIIC QR42_17325 PF00367 phosphotransferase system, EIIB QR42_17330 PF03123 CAT RNA binding domain QR42_17330 PF00874 PRD domain QR42_17340 PF05922 Peptidase inhibitor I9 QR42_17340 PF00082 Subtilase family QR42_17340 PF02225 PA domain QR42_17340 PF13860 FlgD Ig-like domain QR42_17345 PF00296 Luciferase-like monooxygenase QR42_17350 PF00881 Nitroreductase family QR42_17355 PF01098 Cell cycle protein QR42_17360 PF17368 Spore morphogenesis and germination YwcE QR42_17365 PF03626 Prokaryotic Cytochrome C oxidase subunit IV QR42_17370 PF00510 Cytochrome c oxidase subunit III QR42_17375 PF00115 Cytochrome C and Quinol oxidase polypeptide I QR42_17380 PF02790 Cytochrome C oxidase subunit II, transmembrane domain QR42_17380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain QR42_17390 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain QR42_17390 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain QR42_17395 PF16363 GDP-mannose 4,6 dehydratase QR42_17400 PF10509 Galactokinase galactose-binding signature QR42_17400 PF08544 GHMP kinases C terminal QR42_17400 PF00288 GHMP kinases N terminal domain QR42_17415 PF04138 GtrA-like protein QR42_17435 PF04341 Protein of unknown function, DUF485 QR42_17440 PF00474 Sodium:solute symporter family QR42_17455 PF02581 Thiamine monophosphate synthase QR42_17460 PF02110 Hydroxyethylthiazole kinase family QR42_17465 PF03466 LysR substrate binding domain QR42_17465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_17470 PF03788 LrgA family QR42_17475 PF04172 LrgB-like family QR42_17480 PF10672 S-adenosylmethionine-dependent methyltransferase QR42_17480 PF17785 PUA-like domain QR42_17485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QR42_17490 PF00005 ABC transporter QR42_17495 PF00528 Binding-protein-dependent transport system inner membrane component QR42_17500 PF00497 Bacterial extracellular solute-binding proteins, family 3 QR42_17505 PF18801 response regulator aspartate phosphatase H, N terminal QR42_17510 PF04607 Region found in RelA / SpoT proteins QR42_17515 PF02653 Branched-chain amino acid transport system / permease component QR42_17520 PF00005 ABC transporter QR42_17525 PF13407 Periplasmic binding protein domain QR42_17530 PF13229 Right handed beta helix region QR42_17535 PF01063 Amino-transferase class IV QR42_17550 PF11975 Family 4 glycosyl hydrolase C-terminal domain QR42_17550 PF02056 Family 4 glycosyl hydrolase QR42_17555 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit QR42_17560 PF02378 Phosphotransferase system, EIIC QR42_17565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_17570 PF05043 Mga helix-turn-helix domain QR42_17570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_17570 PF08279 HTH domain QR42_17570 PF00874 PRD domain QR42_17585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain QR42_17585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase QR42_17600 PF04542 Sigma-70 region 2 QR42_17600 PF08281 Sigma-70, region 4 QR42_17605 PF00544 Pectate lyase QR42_17610 PF00664 ABC transporter transmembrane region QR42_17610 PF00005 ABC transporter QR42_17615 PF00005 ABC transporter QR42_17615 PF00664 ABC transporter transmembrane region QR42_17620 PF02322 Cytochrome bd terminal oxidase subunit II QR42_17625 PF01654 Cytochrome bd terminal oxidase subunit I QR42_17630 PF00005 ABC transporter QR42_17635 PF01032 FecCD transport family QR42_17645 PF04203 Sortase domain QR42_17650 PF00005 ABC transporter QR42_17655 PF01032 FecCD transport family QR42_17660 PF01497 Periplasmic binding protein QR42_17670 PF05031 Iron Transport-associated domain QR42_17675 PF05031 Iron Transport-associated domain QR42_17680 PF01638 HxlR-like helix-turn-helix QR42_17685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QR42_17690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase QR42_17690 PF00925 GTP cyclohydrolase II QR42_17695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region QR42_17695 PF01872 RibD C-terminal domain QR42_17705 PF01522 Polysaccharide deacetylase QR42_17710 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit QR42_17715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit QR42_17720 PF00232 Glycosyl hydrolase family 1 QR42_17725 PF02378 Phosphotransferase system, EIIC QR42_17730 PF05043 Mga helix-turn-helix domain QR42_17730 PF08279 HTH domain QR42_17730 PF00874 PRD domain QR42_17730 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 QR42_17755 PF03553 Na+/H+ antiporter family QR42_17760 PF00206 Lyase QR42_17760 PF10415 Fumarase C C-terminus QR42_17765 PF17763 Glutaminase/Asparaginase C-terminal domain QR42_17765 PF00710 Asparaginase, N-terminal QR42_17770 PF01381 Helix-turn-helix QR42_17780 PF17353 Family of unknown function (DUF5381) QR42_17795 PF06013 Proteins of 100 residues with WXG QR42_17800 PF07687 Peptidase dimerisation domain QR42_17800 PF01546 Peptidase family M20/M25/M40 QR42_17815 PF01418 Helix-turn-helix domain, rpiR family QR42_17815 PF01380 SIS domain QR42_17820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase QR42_17820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase QR42_17830 PF02447 GntP family permease QR42_17835 PF01717 Cobalamin-independent synthase, Catalytic domain QR42_17840 PF00232 Glycosyl hydrolase family 1 QR42_17845 PF00367 phosphotransferase system, EIIB QR42_17845 PF02378 Phosphotransferase system, EIIC QR42_17845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QR42_17850 PF00874 PRD domain QR42_17850 PF03123 CAT RNA binding domain QR42_17855 PF09234 Domain of unknown function (DUF1963) QR42_17865 PF02361 Cobalt transport protein QR42_17870 PF00005 ABC transporter QR42_17875 PF09819 ABC-type cobalt transport system, permease component QR42_17880 PF03070 TENA/THI-4/PQQC family QR42_17905 PF05547 Immune inhibitor A peptidase M6 QR42_17905 PF00801 PKD domain QR42_17910 PF03992 Antibiotic biosynthesis monooxygenase QR42_17915 PF00881 Nitroreductase family QR42_17920 PF01047 MarR family QR42_17925 PF02885 Glycosyl transferase family, helical bundle domain QR42_17925 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain QR42_17925 PF00591 Glycosyl transferase family, a/b domain QR42_17930 PF01773 Na+ dependent nucleoside transporter N-terminus QR42_17930 PF07662 Na+ dependent nucleoside transporter C-terminus QR42_17935 PF01791 DeoC/LacD family aldolase QR42_17940 PF04198 Putative sugar-binding domain QR42_17950 PF01757 Acyltransferase family QR42_17955 PF07690 Major Facilitator Superfamily QR42_17970 PF00072 Response regulator receiver domain QR42_17970 PF00196 Bacterial regulatory proteins, luxR family QR42_17980 PF13411 MerR HTH family regulatory protein QR42_17985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain QR42_17985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold QR42_17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain QR42_17995 PF00324 Amino acid permease QR42_18000 PF08713 DNA alkylation repair enzyme QR42_18005 PF02447 GntP family permease QR42_18010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain QR42_18010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain QR42_18015 PF01418 Helix-turn-helix domain, rpiR family QR42_18015 PF01380 SIS domain QR42_18020 PF01156 Inosine-uridine preferring nucleoside hydrolase QR42_18050 PF03466 LysR substrate binding domain QR42_18050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_18055 PF00356 Bacterial regulatory proteins, lacI family QR42_18060 PF13416 Bacterial extracellular solute-binding protein QR42_18065 PF00528 Binding-protein-dependent transport system inner membrane component QR42_18070 PF00528 Binding-protein-dependent transport system inner membrane component QR42_18075 PF07745 Glycosyl hydrolase family 53 QR42_18080 PF08533 Beta-galactosidase C-terminal domain QR42_18080 PF02449 Beta-galactosidase QR42_18080 PF08532 Beta-galactosidase trimerisation domain QR42_18085 PF03600 Citrate transporter QR42_18095 PF12679 ABC-2 family transporter protein QR42_18100 PF00005 ABC transporter QR42_18110 PF08274 PhnA Zinc-Ribbon QR42_18110 PF03831 PhnA domain QR42_18115 PF02595 Glycerate kinase family QR42_18120 PF02447 GntP family permease QR42_18125 PF05651 Putative sugar diacid recognition QR42_18125 PF17853 GGDEF-like domain QR42_18125 PF13556 PucR C-terminal helix-turn-helix domain QR42_18130 PF17922 Tetracyclin repressor-like, C-terminal domain QR42_18130 PF00440 Bacterial regulatory proteins, tetR family QR42_18145 PF12704 MacB-like periplasmic core domain QR42_18145 PF02687 FtsX-like permease family QR42_18145 PF00005 ABC transporter QR42_18155 PF18801 response regulator aspartate phosphatase H, N terminal QR42_18160 PF00874 PRD domain QR42_18160 PF03123 CAT RNA binding domain QR42_18165 PF00232 Glycosyl hydrolase family 1 QR42_18170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QR42_18170 PF02378 Phosphotransferase system, EIIC QR42_18170 PF00367 phosphotransferase system, EIIB QR42_18195 PF00293 NUDIX domain QR42_18210 PF00324 Amino acid permease QR42_18220 PF07690 Major Facilitator Superfamily QR42_18225 PF08501 Shikimate dehydrogenase substrate binding domain QR42_18225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain QR42_18230 PF07690 Major Facilitator Superfamily QR42_18255 PF00232 Glycosyl hydrolase family 1 QR42_18260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 QR42_18260 PF02378 Phosphotransferase system, EIIC QR42_18260 PF00367 phosphotransferase system, EIIB QR42_18265 PF07702 UTRA domain QR42_18265 PF00392 Bacterial regulatory proteins, gntR family QR42_18280 PF02567 Phenazine biosynthesis-like protein QR42_18285 PF03466 LysR substrate binding domain QR42_18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family QR42_18300 PF13545 Crp-like helix-turn-helix domain QR42_18300 PF00027 Cyclic nucleotide-binding domain QR42_18310 PF07690 Major Facilitator Superfamily QR42_18330 PF02590 Predicted SPOUT methyltransferase QR42_18335 PF02361 Cobalt transport protein QR42_18340 PF12558 ATP-binding cassette cobalt transporter QR42_18340 PF00005 ABC transporter QR42_18345 PF07155 ECF-type riboflavin transporter, S component QR42_18360 PF00005 ABC transporter QR42_18375 PF00583 Acetyltransferase (GNAT) family QR42_18380 PF13180 PDZ domain QR42_18385 PF00753 Metallo-beta-lactamase superfamily QR42_18390 PF09648 YycH protein QR42_18395 PF07435 YycH protein QR42_18400 PF13426 PAS domain QR42_18400 PF00672 HAMP domain QR42_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase QR42_18400 PF00512 His Kinase A (phospho-acceptor) domain QR42_18405 PF00072 Response regulator receiver domain QR42_18405 PF00486 Transcriptional regulatory protein, C terminal QR42_18430 PF00578 AhpC/TSA family QR42_18440 PF04235 Protein of unknown function (DUF418) QR42_18445 PF00709 Adenylosuccinate synthetase QR42_18450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QR42_18455 PF03796 DnaB-like helicase C terminal domain QR42_18455 PF00772 DnaB-like helicase N terminal domain QR42_18460 PF16226 Domain of unknown function (DUF4885) QR42_18480 PF00756 Putative esterase QR42_18485 PF00106 short chain dehydrogenase QR42_18490 PF00425 chorismate binding enzyme QR42_18495 PF00501 AMP-binding enzyme QR42_18495 PF13193 AMP-binding enzyme C-terminal domain QR42_18500 PF00857 Isochorismatase family QR42_18500 PF00550 Phosphopantetheine attachment site QR42_18505 PF00501 AMP-binding enzyme QR42_18505 PF00975 Thioesterase domain QR42_18505 PF13193 AMP-binding enzyme C-terminal domain QR42_18505 PF00550 Phosphopantetheine attachment site QR42_18505 PF00668 Condensation domain QR42_18510 PF03621 MbtH-like protein QR42_18515 PF12833 Helix-turn-helix domain QR42_18515 PF01497 Periplasmic binding protein QR42_18520 PF01497 Periplasmic binding protein QR42_18525 PF00756 Putative esterase QR42_18530 PF07690 Major Facilitator Superfamily QR42_18535 PF03948 Ribosomal protein L9, C-terminal domain QR42_18535 PF01281 Ribosomal protein L9, N-terminal domain QR42_18540 PF02272 DHHA1 domain QR42_18540 PF01368 DHH family QR42_18545 PF09991 Predicted membrane protein (DUF2232) QR42_18550 PF02833 DHHA2 domain QR42_18550 PF01368 DHH family QR42_18555 PF11738 Protein of unknown function (DUF3298) QR42_18555 PF13739 Deacetylase PdaC QR42_18560 PF08281 Sigma-70, region 4 QR42_18560 PF04542 Sigma-70 region 2 QR42_18570 PF06628 Catalase-related immune-responsive QR42_18570 PF00199 Catalase QR42_18575 PF03358 NADPH-dependent FMN reductase QR42_18580 PF01738 Dienelactone hydrolase family QR42_18585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily QR42_18590 PF00528 Binding-protein-dependent transport system inner membrane component QR42_18595 PF00005 ABC transporter QR42_18595 PF00571 CBS domain QR42_18600 PF01084 Ribosomal protein S18 QR42_18605 PF00436 Single-strand binding protein family QR42_18610 PF01250 Ribosomal protein S6 QR42_18615 PF06071 Protein of unknown function (DUF933) QR42_18615 PF01926 50S ribosome-binding GTPase QR42_18620 PF06107 Bacterial protein of unknown function (DUF951) QR42_18640 PF06866 Protein of unknown function (DUF1256) QR42_18645 PF17762 HTH domain found in ParB protein QR42_18645 PF02195 ParB-like nuclease domain QR42_18650 PF13614 AAA domain QR42_18660 PF17762 HTH domain found in ParB protein QR42_18660 PF02195 ParB-like nuclease domain QR42_18665 PF02527 rRNA small subunit methyltransferase G QR42_18670 PF01134 Glucose inhibited division protein A QR42_18670 PF13932 GidA associated domain QR42_18675 PF10396 GTP-binding protein TrmE N-terminus QR42_18675 PF12631 MnmE helical domain QR42_18675 PF01926 50S ribosome-binding GTPase QR42_18680 PF01424 R3H domain QR42_18680 PF14804 Jag N-terminus QR42_18685 PF02096 60Kd inner membrane protein QR42_18690 PF00825 Ribonuclease P