DOE78_09045 3ff10bb1aef2166489080d775cdbde6b 139 Pfam PF13279 Thioesterase-like superfamily 9 129 2.2E-14 T 01-11-2018 DOE78_09045 3ff10bb1aef2166489080d775cdbde6b 139 SUPERFAMILY SSF54637 4 130 5.15E-34 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_09045 3ff10bb1aef2166489080d775cdbde6b 139 Gene3D G3DSA:3.10.129.10 2 137 1.5E-35 T 01-11-2018 DOE78_09045 3ff10bb1aef2166489080d775cdbde6b 139 PIRSF PIRSF003230 1 137 1.1E-20 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 SUPERFAMILY SSF51412 5 157 5.22E-30 T 01-11-2018 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 SUPERFAMILY SSF51412 143 485 9.68E-129 T 01-11-2018 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 SMART SM01240 9 474 0.0 T 01-11-2018 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 PIRSF PIRSF000130 1 488 7.9E-214 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 SMART SM00116 98 148 7.9E-8 T 01-11-2018 IPR000644 CBS domain DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 SMART SM00116 161 209 1.7E-9 T 01-11-2018 IPR000644 CBS domain DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 Gene3D G3DSA:3.20.20.70 1 487 2.3E-229 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 6.7E-204 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 5.0E-170 T 01-11-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 86.366 T 01-11-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 01-11-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 Pfam PF00571 CBS domain 153 204 4.2E-8 T 01-11-2018 IPR000644 CBS domain DOE78_00075 13a9d4f34d2b99fc3c69bf5595a03576 488 Pfam PF00571 CBS domain 97 144 2.3E-8 T 01-11-2018 IPR000644 CBS domain DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 Gene3D G3DSA:3.20.20.150 1 298 5.9E-101 T 01-11-2018 DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 284 4.1E-104 T 01-11-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 177 184 - T 01-11-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 01-11-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 287 42.312 T 01-11-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 SUPERFAMILY SSF51658 2 296 2.36E-98 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 71 79 - T 01-11-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 SMART SM00518 3 287 1.5E-123 T 01-11-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DOE78_17300 e2890ec73c9b9671a18c6c563778e5f9 298 Pfam PF01261 Xylose isomerase-like TIM barrel 22 239 1.1E-36 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_14355 d154c1c14e03195608295b6b1887dd6d 304 Gene3D G3DSA:3.40.1090.10 1 303 3.0E-65 T 01-11-2018 DOE78_14355 d154c1c14e03195608295b6b1887dd6d 304 Pfam PF01734 Patatin-like phospholipase 4 180 7.6E-26 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DOE78_14355 d154c1c14e03195608295b6b1887dd6d 304 SUPERFAMILY SSF52151 3 296 4.71E-53 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE78_08585 f8567a075b4e208c6d75121fd1135759 288 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 264 4.4E-22 T 01-11-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal DOE78_08585 f8567a075b4e208c6d75121fd1135759 288 Gene3D G3DSA:3.40.50.970 67 224 3.1E-28 T 01-11-2018 DOE78_08585 f8567a075b4e208c6d75121fd1135759 288 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 271 3.2E-96 T 01-11-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate DOE78_08585 f8567a075b4e208c6d75121fd1135759 288 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 195 1.3E-32 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DOE78_08585 f8567a075b4e208c6d75121fd1135759 288 SUPERFAMILY SSF52518 12 264 7.52E-78 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Gene3D G3DSA:2.115.10.20 1141 1462 2.2E-148 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SUPERFAMILY SSF49899 1454 1614 1.92E-28 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Gene3D G3DSA:2.60.120.560 378 535 2.0E-42 T 01-11-2018 DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SUPERFAMILY SSF49899 373 534 6.33E-34 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SUPERFAMILY SSF49899 871 1102 5.32E-33 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Gene3D G3DSA:2.115.10.20 41 376 5.2E-117 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Gene3D G3DSA:2.60.120.200 872 1104 3.9E-35 T 01-11-2018 DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SMART SM00560 945 1094 2.7E-27 T 01-11-2018 IPR006558 LamG-like jellyroll fold DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SUPERFAMILY SSF75005 1125 1450 1.33E-75 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SMART SM00640 49 496 7.9E-145 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SMART SM00640 1134 1575 2.2E-104 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 49 373 2.4E-90 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 1134 1450 1.5E-64 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 376 530 3.9E-34 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 1457 1610 2.8E-30 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 927 1097 7.6E-25 T 01-11-2018 DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 SUPERFAMILY SSF75005 40 374 7.85E-96 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 49 62 - T 01-11-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Gene3D G3DSA:2.60.120.260 709 869 1.1E-11 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Gene3D G3DSA:2.60.120.260 546 704 3.4E-8 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_09115 0be6541780d44e106b9c257f30d78bf9 1800 Gene3D G3DSA:2.60.120.560 1463 1611 2.2E-148 T 01-11-2018 DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 SMART SM00881 81 182 1.4E-23 T 01-11-2018 IPR003781 CoA-binding GO:0048037 DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 1.6E-19 T 01-11-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 SUPERFAMILY SSF51735 84 209 4.92E-28 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 211 39.091 T 01-11-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 SUPERFAMILY SSF46785 9 80 5.44E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 Gene3D G3DSA:3.40.50.720 83 217 3.6E-47 T 01-11-2018 DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 Gene3D G3DSA:1.10.10.10 1 82 6.1E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_01510 d8d045a0fbdb7760f29b45b94537bcf3 219 Pfam PF02629 CoA binding domain 84 180 3.8E-27 T 01-11-2018 IPR003781 CoA-binding GO:0048037 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 734 17.567 T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 SUPERFAMILY SSF52540 228 407 1.32E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Pfam PF00009 Elongation factor Tu GTP binding domain 241 396 3.1E-36 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 153 734 2.2E-281 T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 SUPERFAMILY SSF52156 514 643 1.16E-39 T 01-11-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 SUPERFAMILY SSF50447 637 734 3.53E-33 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 ProSitePatterns PS01176 Initiation factor 2 signature. 687 709 - T 01-11-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Gene3D G3DSA:1.10.10.2480 1 69 1.9E-15 T 01-11-2018 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Gene3D G3DSA:3.40.50.10050 530 637 7.1E-40 T 01-11-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Gene3D G3DSA:3.40.50.300 233 407 2.6E-73 T 01-11-2018 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 239 395 1.0E-39 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Gene3D G3DSA:2.40.30.10 638 735 1.9E-34 T 01-11-2018 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 160 210 1.9E-15 T 01-11-2018 IPR006847 Translation initiation factor IF-2, N-terminal DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 3.8E-15 T 01-11-2018 IPR006847 Translation initiation factor IF-2, N-terminal DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Pfam PF11987 Translation-initiation factor 2 522 626 5.5E-38 T 01-11-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 Gene3D G3DSA:2.40.30.10 408 525 1.8E-41 T 01-11-2018 DOE78_08390 863b47f46231d2dbc689a02f1a5b246f 735 SUPERFAMILY SSF50447 408 491 1.06E-26 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 Gene3D G3DSA:3.30.870.10 53 250 6.4E-33 T 01-11-2018 DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 SUPERFAMILY SSF56024 273 433 6.5E-19 T 01-11-2018 DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 SUPERFAMILY SSF56024 61 219 7.4E-30 T 01-11-2018 DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 SMART SM00155 147 174 3.9E-4 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 SMART SM00155 369 396 0.76 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 Gene3D G3DSA:3.30.870.10 251 456 1.6E-28 T 01-11-2018 DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 Pfam PF13091 PLD-like domain 64 215 1.1E-16 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_02275 9b20cfb7ac96fa2bc8bf08c527dff402 469 Pfam PF13091 PLD-like domain 294 423 1.5E-14 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 TIGRFAM TIGR00433 bioB: biotin synthase 28 320 2.5E-118 T 01-11-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 PIRSF PIRSF001619 1 328 2.4E-121 T 01-11-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 Pfam PF04055 Radical SAM superfamily 64 220 4.3E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 SMART SM00729 55 260 2.6E-33 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 SUPERFAMILY SSF102114 14 321 1.15E-71 T 01-11-2018 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 Hamap MF_01694 Biotin synthase [bioB]. 15 322 40.239 T 01-11-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 SMART SM00876 231 321 2.0E-32 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 Gene3D G3DSA:3.20.20.70 15 323 8.3E-106 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_04810 d8cd3435aaabbd3c70bdc5f48daceebe 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 320 3.0E-14 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DOE78_18155 15bc39ffdc500ad060d111ba27c45edf 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_18155 15bc39ffdc500ad060d111ba27c45edf 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 1.2E-16 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_18155 15bc39ffdc500ad060d111ba27c45edf 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 332 4.9E-27 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_18155 15bc39ffdc500ad060d111ba27c45edf 336 SUPERFAMILY SSF52540 17 267 6.86E-75 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18155 15bc39ffdc500ad060d111ba27c45edf 336 Pfam PF00005 ABC transporter 45 195 2.1E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_18155 15bc39ffdc500ad060d111ba27c45edf 336 SMART SM00382 53 245 8.2E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18155 15bc39ffdc500ad060d111ba27c45edf 336 Gene3D G3DSA:3.40.50.300 15 336 1.3E-100 T 01-11-2018 DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 Gene3D G3DSA:1.10.287.130 352 468 8.2E-9 T 01-11-2018 DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 Gene3D G3DSA:3.30.565.10 480 621 1.9E-11 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 Pfam PF00672 HAMP domain 355 398 2.9E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 SMART SM00304 354 406 3.4E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 SUPERFAMILY SSF55874 477 617 4.71E-15 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 Gene3D G3DSA:3.30.450.20 217 332 2.2E-12 T 01-11-2018 DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 Pfam PF06580 Histidine kinase 418 496 3.0E-18 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 SUPERFAMILY SSF158472 355 404 2.35E-9 T 01-11-2018 DOE78_13615 13ecfcaf1a288d78c92357f4254163e5 626 Pfam PF02743 Cache domain 71 316 8.2E-21 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_06990 af14177c79f46468f97ff640b454d377 764 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 278 382 3.4E-22 T 01-11-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DOE78_06990 af14177c79f46468f97ff640b454d377 764 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 545 653 5.6E-10 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DOE78_06990 af14177c79f46468f97ff640b454d377 764 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 30 255 6.0E-57 T 01-11-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 DOE78_06990 af14177c79f46468f97ff640b454d377 764 Gene3D G3DSA:3.40.50.970 18 268 3.0E-77 T 01-11-2018 DOE78_06990 af14177c79f46468f97ff640b454d377 764 Gene3D G3DSA:3.40.50.970 543 761 9.9E-40 T 01-11-2018 DOE78_06990 af14177c79f46468f97ff640b454d377 764 SUPERFAMILY SSF52922 270 409 1.86E-28 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_06990 af14177c79f46468f97ff640b454d377 764 SUPERFAMILY SSF52518 394 762 2.64E-54 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_06990 af14177c79f46468f97ff640b454d377 764 Gene3D G3DSA:3.40.50.920 269 408 2.0E-35 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_06990 af14177c79f46468f97ff640b454d377 764 SUPERFAMILY SSF52518 21 267 7.5E-57 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_23610 d8b353dcc6b5b565ad30e03465a8de17 248 Gene3D G3DSA:3.30.360.40 174 248 8.6E-29 T 01-11-2018 DOE78_23610 d8b353dcc6b5b565ad30e03465a8de17 248 Pfam PF08680 TATA-box binding 48 248 1.9E-54 T 01-11-2018 IPR014794 TATA-box binding DOE78_23610 d8b353dcc6b5b565ad30e03465a8de17 248 Gene3D G3DSA:3.30.2030.10 32 172 8.3E-45 T 01-11-2018 DOE78_23610 d8b353dcc6b5b565ad30e03465a8de17 248 SUPERFAMILY SSF143842 34 246 5.62E-52 T 01-11-2018 IPR036209 YwmB-like superfamily DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 403 530 2.3E-25 T 01-11-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 Gene3D G3DSA:1.10.8.870 421 548 1.8E-38 T 01-11-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 Gene3D G3DSA:3.50.50.60 18 379 5.0E-135 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 Pfam PF01266 FAD dependent oxidoreductase 21 345 3.3E-50 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 3.1E-29 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 3.1E-29 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 336 342 3.1E-29 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 3.1E-29 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 3.1E-29 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 3.1E-29 T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 SUPERFAMILY SSF51905 8 237 8.43E-34 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 SUPERFAMILY SSF54373 250 342 8.83E-10 T 01-11-2018 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 01-11-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DOE78_15180 a6797a21da5465f640474baa4c26ce48 559 Gene3D G3DSA:3.30.9.10 102 343 5.0E-135 T 01-11-2018 DOE78_06915 cce87e223cc3763b0428639dff7f5a91 257 SUPERFAMILY SSF161098 53 237 1.22E-27 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06915 cce87e223cc3763b0428639dff7f5a91 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 244 5.3E-27 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_06915 cce87e223cc3763b0428639dff7f5a91 257 Gene3D G3DSA:1.10.3720.10 46 246 7.2E-23 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13440 4ea74aa7b5bb0281c9583b002956dd29 48 Hamap MF_00666 Small, acid-soluble spore protein P [sspP]. 1 48 16.747 T 01-11-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 DOE78_13440 4ea74aa7b5bb0281c9583b002956dd29 48 Pfam PF08179 Small acid-soluble spore protein P family 1 43 2.3E-21 T 01-11-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 SUPERFAMILY SSF47203 228 378 1.35E-61 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 PIRSF PIRSF016578 3 367 6.2E-22 T 01-11-2018 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 376 2.5E-52 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 2.2E-44 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 Gene3D G3DSA:1.10.540.10 1 120 7.0E-49 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 Gene3D G3DSA:2.40.110.10 121 234 1.1E-46 T 01-11-2018 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 SUPERFAMILY SSF56645 1 242 1.7E-97 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 Gene3D G3DSA:1.20.140.10 235 379 5.7E-59 T 01-11-2018 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_23860 3c6ec9a55bc0bd948d556055c0bd0a38 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.3E-29 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 SUPERFAMILY SSF54826 1 126 1.93E-29 T 01-11-2018 DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 Gene3D G3DSA:3.30.390.10 8 358 1.1E-128 T 01-11-2018 IPR029017 Enolase-like, N-terminal DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 125 1.1E-15 T 01-11-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 SUPERFAMILY SSF51604 114 363 9.3E-66 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 360 43.745 T 01-11-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 SMART SM00922 143 235 2.7E-21 T 01-11-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 10 333 7.9E-117 T 01-11-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 Pfam PF13378 Enolase C-terminal domain-like 146 353 2.5E-45 T 01-11-2018 IPR029065 Enolase C-terminal domain-like DOE78_05035 2af8bdbcb87021bc148552525a4080d3 368 Gene3D G3DSA:3.20.20.120 118 347 1.1E-128 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily DOE78_20450 24d24fd5383a0996e3aa3969b1e3e12b 396 Gene3D G3DSA:3.40.50.2000 108 205 1.6E-39 T 01-11-2018 DOE78_20450 24d24fd5383a0996e3aa3969b1e3e12b 396 Pfam PF00534 Glycosyl transferases group 1 230 376 1.5E-23 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_20450 24d24fd5383a0996e3aa3969b1e3e12b 396 SUPERFAMILY SSF53756 4 373 2.09E-44 T 01-11-2018 DOE78_20450 24d24fd5383a0996e3aa3969b1e3e12b 396 Gene3D G3DSA:3.40.50.2000 206 376 1.6E-39 T 01-11-2018 DOE78_16425 8c2b20fe98cc7fe367ab8ca3bfbec5b4 116 Pfam PF01740 STAS domain 5 107 3.4E-23 T 01-11-2018 IPR002645 STAS domain DOE78_16425 8c2b20fe98cc7fe367ab8ca3bfbec5b4 116 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 107 1.5E-37 T 01-11-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 DOE78_16425 8c2b20fe98cc7fe367ab8ca3bfbec5b4 116 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 5 110 3.0E-45 T 01-11-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 DOE78_16425 8c2b20fe98cc7fe367ab8ca3bfbec5b4 116 SUPERFAMILY SSF52091 3 111 1.35E-30 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_16425 8c2b20fe98cc7fe367ab8ca3bfbec5b4 116 Gene3D G3DSA:3.30.750.24 2 116 6.3E-33 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_15425 2ac1a017e49d361b4ac314087e7a18d2 289 Gene3D G3DSA:3.40.630.30 132 274 1.1E-6 T 01-11-2018 DOE78_15425 2ac1a017e49d361b4ac314087e7a18d2 289 Pfam PF13527 Acetyltransferase (GNAT) domain 135 243 1.1E-5 T 01-11-2018 DOE78_15425 2ac1a017e49d361b4ac314087e7a18d2 289 SUPERFAMILY SSF55729 135 281 3.3E-14 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_15425 2ac1a017e49d361b4ac314087e7a18d2 289 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 18 281 5.6E-90 T 01-11-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 DOE78_17160 582e3615ed37fee11a26b3e9425dad51 188 SUPERFAMILY SSF100950 3 186 3.91E-51 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_17160 582e3615ed37fee11a26b3e9425dad51 188 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 180 2.5E-54 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DOE78_17160 582e3615ed37fee11a26b3e9425dad51 188 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 180 1.1E-43 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DOE78_17160 582e3615ed37fee11a26b3e9425dad51 188 PIRSF PIRSF006806 1 184 3.6E-49 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DOE78_17160 582e3615ed37fee11a26b3e9425dad51 188 Gene3D G3DSA:3.40.50.10420 1 188 2.2E-63 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DOE78_05765 341500c300cd2766600a7d6d706601ba 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 1.7E-23 T 01-11-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DOE78_05765 341500c300cd2766600a7d6d706601ba 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_05765 341500c300cd2766600a7d6d706601ba 68 Gene3D G3DSA:1.10.8.910 8 68 1.0E-31 T 01-11-2018 IPR038300 SASP, alpha/beta-type superfamily DOE78_05765 341500c300cd2766600a7d6d706601ba 68 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 Gene3D G3DSA:3.90.25.10 184 326 5.0E-104 T 01-11-2018 DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 Gene3D G3DSA:3.40.50.720 8 314 5.0E-104 T 01-11-2018 DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 322 1.4E-61 T 01-11-2018 IPR016040 NAD(P)-binding domain DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 SUPERFAMILY SSF51735 5 332 5.45E-90 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 PRINTS PR01713 Nucleotide sugar epimerase signature 220 235 9.1E-29 T 01-11-2018 DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 PRINTS PR01713 Nucleotide sugar epimerase signature 33 49 9.1E-29 T 01-11-2018 DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 PRINTS PR01713 Nucleotide sugar epimerase signature 293 310 9.1E-29 T 01-11-2018 DOE78_08790 881afe0d02ddd63f327cb91d2662ec73 334 PRINTS PR01713 Nucleotide sugar epimerase signature 254 269 9.1E-29 T 01-11-2018 DOE78_18005 d52d84909a884f9b38c367cd15246593 571 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 400 567 2.7E-43 T 01-11-2018 IPR000160 GGDEF domain DOE78_18005 d52d84909a884f9b38c367cd15246593 571 SMART SM00065 249 395 9.8E-7 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_18005 d52d84909a884f9b38c367cd15246593 571 SMART SM00267 387 569 1.2E-49 T 01-11-2018 IPR000160 GGDEF domain DOE78_18005 d52d84909a884f9b38c367cd15246593 571 Gene3D G3DSA:3.30.450.40 226 395 1.8E-24 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_18005 d52d84909a884f9b38c367cd15246593 571 SUPERFAMILY SSF55781 233 400 1.26E-20 T 01-11-2018 DOE78_18005 d52d84909a884f9b38c367cd15246593 571 Pfam PF13185 GAF domain 249 386 3.0E-11 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_18005 d52d84909a884f9b38c367cd15246593 571 Gene3D G3DSA:3.30.70.270 396 570 1.6E-51 T 01-11-2018 DOE78_18005 d52d84909a884f9b38c367cd15246593 571 SUPERFAMILY SSF55073 403 568 3.22E-43 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_18005 d52d84909a884f9b38c367cd15246593 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 402 565 1.4E-42 T 01-11-2018 IPR000160 GGDEF domain DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 SUPERFAMILY SSF46785 257 331 6.89E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 Gene3D G3DSA:3.40.50.300 19 182 7.4E-40 T 01-11-2018 DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 333 170.372 T 01-11-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 Gene3D G3DSA:1.10.8.60 183 257 4.9E-30 T 01-11-2018 DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 4.1E-34 T 01-11-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 Gene3D G3DSA:1.10.10.10 258 333 1.0E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 SUPERFAMILY SSF52540 21 252 4.75E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 1.4E-147 T 01-11-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 SMART SM00382 52 183 2.5E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 236 1.2E-117 T 01-11-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DOE78_17850 e1ca9ce5d1f69d5b315934e7589ebde7 333 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 332 4.0E-35 T 01-11-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 Gene3D G3DSA:1.10.1140.10 354 472 1.1E-56 T 01-11-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 469 57.614 T 01-11-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 SUPERFAMILY SSF50615 1 81 1.28E-27 T 01-11-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 SUPERFAMILY SSF47917 354 469 1.1E-52 T 01-11-2018 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 469 2.3E-258 T 01-11-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 Gene3D G3DSA:2.40.10.170 1 82 1.3E-32 T 01-11-2018 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 80 7.8E-25 T 01-11-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 Gene3D G3DSA:3.40.50.300 84 352 1.6E-114 T 01-11-2018 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 6.2E-68 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 SMART SM00382 150 414 3.5E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_23680 4f431a9db385b1ff00424b6f74733929 473 SUPERFAMILY SSF52540 84 356 5.71E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 SUPERFAMILY SSF56059 670 926 4.88E-76 T 01-11-2018 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 SUPERFAMILY SSF52440 1 127 3.74E-49 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 670 863 2.5E-34 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.7E-81 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Gene3D G3DSA:3.30.470.20 663 924 3.2E-82 T 01-11-2018 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 998 0.0 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 9.3E-62 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 9.3E-62 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 9.3E-62 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 9.3E-62 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 9.3E-62 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 9.3E-62 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 9.3E-62 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Gene3D G3DSA:3.40.50.20 1 116 5.2E-47 T 01-11-2018 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Gene3D G3DSA:3.30.1490.20 682 748 3.2E-82 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Gene3D G3DSA:1.10.1030.10 402 549 6.2E-43 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1022 12.331 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 SMART SM01096 420 543 4.8E-55 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 SUPERFAMILY SSF52440 553 671 1.44E-44 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 SUPERFAMILY SSF56059 128 399 6.89E-109 T 01-11-2018 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Gene3D G3DSA:3.30.470.20 119 401 1.6E-124 T 01-11-2018 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 543 3.0E-37 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 SUPERFAMILY SSF48108 395 550 1.44E-46 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06490 675e87673499c2c42b9875840a2a7739 1036 Gene3D G3DSA:3.40.50.20 550 658 2.8E-45 T 01-11-2018 DOE78_00190 343570510a5e7836b47ed2f80995eecf 476 SUPERFAMILY SSF53383 6 355 4.39E-87 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_00190 343570510a5e7836b47ed2f80995eecf 476 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 396 461 6.5E-13 T 01-11-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DOE78_00190 343570510a5e7836b47ed2f80995eecf 476 Gene3D G3DSA:3.90.1150.150 279 369 3.1E-115 T 01-11-2018 DOE78_00190 343570510a5e7836b47ed2f80995eecf 476 Gene3D G3DSA:3.90.105.10 411 467 1.1E-19 T 01-11-2018 DOE78_00190 343570510a5e7836b47ed2f80995eecf 476 SUPERFAMILY SSF55904 332 474 7.72E-25 T 01-11-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DOE78_00190 343570510a5e7836b47ed2f80995eecf 476 Gene3D G3DSA:3.40.640.10 48 278 3.1E-115 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_00190 343570510a5e7836b47ed2f80995eecf 476 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 306 4.4E-82 T 01-11-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DOE78_04210 8c6a7d8beac13d2f538a4da9e0ed8da7 234 Pfam PF04239 Protein of unknown function (DUF421) 96 209 2.7E-25 T 01-11-2018 IPR007353 Protein of unknown function DUF421 DOE78_04210 8c6a7d8beac13d2f538a4da9e0ed8da7 234 Gene3D G3DSA:3.30.240.20 178 234 2.1E-11 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_04210 8c6a7d8beac13d2f538a4da9e0ed8da7 234 Gene3D G3DSA:3.30.240.20 88 162 2.5E-19 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_01120 7866b53a408561e44fd672d891507dee 301 Gene3D G3DSA:3.40.190.290 91 294 1.2E-39 T 01-11-2018 DOE78_01120 7866b53a408561e44fd672d891507dee 301 SUPERFAMILY SSF53850 89 294 1.48E-36 T 01-11-2018 DOE78_01120 7866b53a408561e44fd672d891507dee 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_01120 7866b53a408561e44fd672d891507dee 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_01120 7866b53a408561e44fd672d891507dee 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-6 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_01120 7866b53a408561e44fd672d891507dee 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.5E-16 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_01120 7866b53a408561e44fd672d891507dee 301 SUPERFAMILY SSF46785 2 86 2.41E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_01120 7866b53a408561e44fd672d891507dee 301 Gene3D G3DSA:1.10.10.10 1 90 1.4E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_01120 7866b53a408561e44fd672d891507dee 301 Pfam PF03466 LysR substrate binding domain 88 293 1.2E-43 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 SUPERFAMILY SSF46785 8 66 2.97E-10 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 Pfam PF02829 3H domain 79 175 3.2E-38 T 01-11-2018 IPR004173 3H domain GO:0036094 DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 Gene3D G3DSA:1.10.10.10 1 66 8.3E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 Gene3D G3DSA:3.30.1340.20 73 178 9.5E-40 T 01-11-2018 IPR035922 3H domain superfamily DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 Pfam PF08279 HTH domain 11 63 7.6E-14 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 83 176 6.0E-32 T 01-11-2018 IPR004173 3H domain GO:0036094 DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 PIRSF PIRSF037847 6 178 1.1E-65 T 01-11-2018 IPR026043 Transcription repressor NadR DOE78_17900 5e23781cfbb537ed4600a687b817b196 179 SUPERFAMILY SSF75500 74 177 4.84E-38 T 01-11-2018 IPR035922 3H domain superfamily DOE78_22580 84e0909fa40a12807e05566868332cc1 343 SUPERFAMILY SSF50129 1 170 3.2E-50 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_22580 84e0909fa40a12807e05566868332cc1 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_22580 84e0909fa40a12807e05566868332cc1 343 SUPERFAMILY SSF51735 138 307 7.77E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_22580 84e0909fa40a12807e05566868332cc1 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 133 9.6E-35 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_22580 84e0909fa40a12807e05566868332cc1 343 Gene3D G3DSA:3.90.180.10 18 332 4.2E-105 T 01-11-2018 DOE78_22580 84e0909fa40a12807e05566868332cc1 343 SMART SM00829 10 339 3.0E-10 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_22580 84e0909fa40a12807e05566868332cc1 343 Gene3D G3DSA:3.40.50.720 151 287 4.2E-105 T 01-11-2018 DOE78_22580 84e0909fa40a12807e05566868332cc1 343 Pfam PF00107 Zinc-binding dehydrogenase 173 302 3.4E-30 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 415 636 1.9E-65 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 SMART SM00481 337 404 8.3E-26 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:2.40.50.140 223 324 1.9E-34 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:1.10.150.870 1288 1424 8.8E-54 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Pfam PF11490 DNA polymerase III polC-type N-terminus II 95 206 9.9E-24 T 01-11-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1438 455.011 T 01-11-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Pfam PF14579 Helix-hairpin-helix motif 1354 1430 2.6E-9 T 01-11-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Pfam PF00929 Exonuclease 424 578 1.4E-40 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:1.10.150.700 1097 1185 1.1E-36 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:1.10.150.700 1236 1287 1.1E-14 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 SUPERFAMILY SSF53098 422 878 3.95E-108 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 826 1245 1.3E-98 T 01-11-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:3.20.20.140 561 807 2.0E-54 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:3.20.20.140 337 404 4.7E-11 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Pfam PF14480 DNA polymerase III polC-type N-terminus I 9 81 2.7E-21 T 01-11-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 234 1438 0.0 T 01-11-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 SUPERFAMILY SSF50249 238 322 1.17E-11 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Pfam PF02811 PHP domain 338 695 1.7E-53 T 01-11-2018 IPR004013 PHP domain GO:0003824 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:3.30.1900.20 974 1096 7.6E-60 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:1.10.100.20 996 1043 7.6E-60 T 01-11-2018 DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 SMART SM00479 422 588 3.0E-55 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_08365 242a14c4a59a51fa6e95864b4f117f3a 1438 Gene3D G3DSA:3.30.420.10 413 560 9.6E-45 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 SUPERFAMILY SSF88946 102 211 1.18E-54 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 165 178 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 334 360 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 SUPERFAMILY SSF88659 271 372 3.36E-30 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Pfam PF03979 Sigma-70 factor, region 1.1 17 78 7.7E-14 T 01-11-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 SUPERFAMILY SSF88659 214 287 2.62E-22 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Pfam PF04539 Sigma-70 region 3 220 296 4.7E-32 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Pfam PF04545 Sigma-70, region 4 309 362 5.2E-20 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 137 362 6.7E-40 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 PRINTS PR00046 Major sigma-70 factor signature 165 178 3.1E-32 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 PRINTS PR00046 Major sigma-70 factor signature 349 360 3.1E-32 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 PRINTS PR00046 Major sigma-70 factor signature 313 325 3.1E-32 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 PRINTS PR00046 Major sigma-70 factor signature 189 197 3.1E-32 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 PRINTS PR00046 Major sigma-70 factor signature 334 349 3.1E-32 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Gene3D G3DSA:1.10.601.10 136 213 8.2E-51 T 01-11-2018 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Gene3D G3DSA:1.10.601.10 101 135 8.9E-12 T 01-11-2018 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 137 373 6.8E-125 T 01-11-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Gene3D G3DSA:1.10.220.120 16 75 3.1E-8 T 01-11-2018 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Gene3D G3DSA:1.10.10.10 302 374 2.8E-36 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Gene3D G3DSA:1.10.10.10 214 289 9.6E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Pfam PF04542 Sigma-70 region 2 141 210 3.7E-22 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 11 374 34.111 T 01-11-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DOE78_17345 f755e21afb4fef389fe4317a1a9f72a2 374 Pfam PF00140 Sigma-70 factor, region 1.2 103 136 1.6E-18 T 01-11-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_11015 95cdaf802b53a10b9f17c50785338368 244 SUPERFAMILY SSF88713 45 206 4.17E-31 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_11015 95cdaf802b53a10b9f17c50785338368 244 Pfam PF01522 Polysaccharide deacetylase 75 198 2.0E-17 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DOE78_11015 95cdaf802b53a10b9f17c50785338368 244 Gene3D G3DSA:3.20.20.370 24 241 2.0E-62 T 01-11-2018 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SUPERFAMILY SSF50249 36 199 9.79E-49 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SUPERFAMILY SSF56037 209 403 2.48E-69 T 01-11-2018 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SUPERFAMILY SSF54991 705 803 7.85E-32 T 01-11-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Gene3D G3DSA:3.50.40.10 204 405 8.7E-83 T 01-11-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Gene3D G3DSA:3.30.56.10 4 189 1.7E-68 T 01-11-2018 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 2.6E-276 T 01-11-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 6.5E-20 T 01-11-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Gene3D G3DSA:3.30.56.10 411 483 2.9E-26 T 01-11-2018 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SMART SM00874 411 479 7.2E-29 T 01-11-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SUPERFAMILY SSF55681 475 697 9.44E-52 T 01-11-2018 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Pfam PF01588 Putative tRNA binding domain 46 152 4.0E-28 T 01-11-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 9.2E-29 T 01-11-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SUPERFAMILY SSF46955 411 483 6.04E-19 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Pfam PF03483 B3/4 domain 222 393 1.6E-65 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SMART SM00896 710 803 2.3E-43 T 01-11-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 SMART SM00873 221 394 1.8E-87 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Gene3D G3DSA:3.30.930.10 495 699 2.4E-63 T 01-11-2018 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Gene3D G3DSA:2.40.50.140 40 161 1.7E-68 T 01-11-2018 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Gene3D G3DSA:3.30.70.380 711 803 1.6E-30 T 01-11-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DOE78_18300 8fd5c27a176974f51bde80f3ec5f3088 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 46.966 T 01-11-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SUPERFAMILY SSF55785 190 317 2.09E-13 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Pfam PF08447 PAS fold 228 313 5.3E-11 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Pfam PF00990 Diguanylate cyclase, GGDEF domain 454 610 4.6E-43 T 01-11-2018 IPR000160 GGDEF domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Pfam PF00563 EAL domain 632 866 5.3E-68 T 01-11-2018 IPR001633 EAL domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Pfam PF13426 PAS domain 93 192 9.7E-6 T 01-11-2018 IPR000014 PAS domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Gene3D G3DSA:3.30.450.20 320 441 4.9E-23 T 01-11-2018 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SMART SM00052 625 871 3.7E-95 T 01-11-2018 IPR001633 EAL domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Gene3D G3DSA:3.20.20.450 628 880 7.2E-87 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SMART SM00086 277 319 3.9E-4 T 01-11-2018 IPR001610 PAC motif DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SMART SM00086 402 443 4.4 T 01-11-2018 IPR001610 PAC motif DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SMART SM00086 153 193 350.0 T 01-11-2018 IPR001610 PAC motif DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Gene3D G3DSA:3.30.70.270 448 627 6.3E-53 T 01-11-2018 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SUPERFAMILY SSF55785 316 441 8.03E-23 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Gene3D G3DSA:2.10.70.100 277 319 5.1E-10 T 01-11-2018 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SUPERFAMILY SSF141868 632 878 5.75E-82 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Gene3D G3DSA:3.30.450.20 84 204 1.0E-14 T 01-11-2018 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 450 615 8.3E-41 T 01-11-2018 IPR000160 GGDEF domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 79 200 1.9E-16 T 01-11-2018 IPR000014 PAS domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 445 1.2E-22 T 01-11-2018 IPR000014 PAS domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Pfam PF00989 PAS fold 332 440 3.5E-13 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 Gene3D G3DSA:3.30.450.20 205 271 1.1E-13 T 01-11-2018 DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SMART SM00267 443 615 9.7E-54 T 01-11-2018 IPR000160 GGDEF domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SMART SM00091 331 397 1.2E-11 T 01-11-2018 IPR000014 PAS domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SMART SM00091 79 146 4.2E-4 T 01-11-2018 IPR000014 PAS domain DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SUPERFAMILY SSF55785 96 202 1.92E-13 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_11925 c989dc4f8c4b5b1843ddaf25741d60e3 897 SUPERFAMILY SSF55073 459 616 1.8E-45 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_07215 f1579183356ea92c0589587496b4aa24 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 344 689 7.4E-157 T 01-11-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 Gene3D G3DSA:3.30.870.10 332 512 4.7E-74 T 01-11-2018 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 SUPERFAMILY SSF140356 14 119 1.7E-40 T 01-11-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 Pfam PF02503 Polyphosphate kinase middle domain 133 334 1.5E-70 T 01-11-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 Gene3D G3DSA:3.30.870.10 513 699 2.0E-72 T 01-11-2018 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 PIRSF PIRSF015589 2 700 2.8E-282 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 SUPERFAMILY SSF56024 513 696 8.07E-73 T 01-11-2018 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 SUPERFAMILY SSF56024 329 508 1.29E-55 T 01-11-2018 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 SUPERFAMILY SSF143724 121 321 4.71E-59 T 01-11-2018 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 17 123 3.0E-41 T 01-11-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 Gene3D G3DSA:3.30.1840.10 11 322 5.2E-114 T 01-11-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 14 694 29.307 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DOE78_07215 f1579183356ea92c0589587496b4aa24 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 16 690 6.3E-279 T 01-11-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 8 468 1.5E-218 T 01-11-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 SMART SM01086 360 454 2.1E-25 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 SMART SM00382 53 357 9.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 363 430 8.6E-8 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 SUPERFAMILY SSF52540 8 466 1.7E-92 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 5 468 44.376 T 01-11-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 111 3.1E-6 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 Gene3D G3DSA:1.10.8.60 360 465 3.4E-40 T 01-11-2018 DOE78_08140 a8d439e11bd269f042a2982135767ba3 468 Pfam PF07724 AAA domain (Cdc48 subfamily) 214 354 1.6E-40 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 168 4.4E-23 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 Pfam PF04542 Sigma-70 region 2 23 81 2.2E-12 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 Pfam PF08281 Sigma-70, region 4 115 166 4.4E-13 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 SUPERFAMILY SSF88946 4 99 1.55E-23 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 TIGRFAM TIGR02954 Sig70_famx3: RNA polymerase sigma-70 factor, TIGR02954 family 5 171 1.2E-60 T 01-11-2018 IPR014300 RNA polymerase sigma-V type DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 SUPERFAMILY SSF88659 110 170 1.25E-12 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 Gene3D G3DSA:1.10.10.10 109 174 4.6E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13705 07cf7594a563ed9a33d353661ea645f2 179 Gene3D G3DSA:1.10.1740.10 2 100 3.3E-23 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 178 2.0E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 SUPERFAMILY SSF54211 227 397 1.37E-63 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 609 625 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 11 21 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 186 201 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 380 400 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 201 214 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 226 248 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 593 605 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 318 334 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 366 380 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR01159 DNA gyrase subunit B signature 476 485 5.2E-80 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Gene3D G3DSA:3.30.230.10 226 404 9.4E-76 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 510 527 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 40 55 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 118 132 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 492 508 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 426 440 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 274 287 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 75 88 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 572 588 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 PRINTS PR00418 DNA topoisomerase II family signature 530 542 1.2E-73 T 01-11-2018 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 640 99.217 T 01-11-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 629 6.9E-32 T 01-11-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 SMART SM00387 36 180 3.7E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 01-11-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Pfam PF00204 DNA gyrase B 227 396 7.6E-65 T 01-11-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Gene3D G3DSA:3.40.50.670 405 640 4.0E-112 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Pfam PF01751 Toprim domain 425 536 1.8E-18 T 01-11-2018 IPR006171 TOPRIM domain DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 640 0.0 T 01-11-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 SUPERFAMILY SSF55874 11 223 7.47E-75 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 SMART SM00433 40 633 0.0 T 01-11-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 Gene3D G3DSA:3.30.565.10 7 225 1.2E-93 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_00030 f8fbe6cdf830bca1f30d4ebebda898d3 640 SUPERFAMILY SSF56719 400 631 3.14E-93 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DOE78_03935 1fa6cb150688dde234cf6318e7ccd041 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 49 342 1.1E-66 T 01-11-2018 IPR012938 Glucose/Sorbosone dehydrogenase DOE78_03935 1fa6cb150688dde234cf6318e7ccd041 358 SUPERFAMILY SSF50952 45 319 2.62E-36 T 01-11-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DOE78_03935 1fa6cb150688dde234cf6318e7ccd041 358 Gene3D G3DSA:2.120.10.30 24 358 4.7E-105 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_11940 e060c7d73220cacdccdb0aae0de2b141 584 Gene3D G3DSA:3.30.565.10 430 583 2.4E-15 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_11940 e060c7d73220cacdccdb0aae0de2b141 584 Pfam PF02743 Cache domain 34 276 3.1E-24 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_11940 e060c7d73220cacdccdb0aae0de2b141 584 Pfam PF06580 Histidine kinase 378 456 3.4E-24 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_11940 e060c7d73220cacdccdb0aae0de2b141 584 Gene3D G3DSA:1.10.287.130 311 427 2.2E-5 T 01-11-2018 DOE78_11940 e060c7d73220cacdccdb0aae0de2b141 584 SUPERFAMILY SSF55874 433 580 7.86E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15105 e50d4fe60cbb158aaa2999b41b0bc686 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 9.1E-21 T 01-11-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 DOE78_15105 e50d4fe60cbb158aaa2999b41b0bc686 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 1.0E-5 T 01-11-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 DOE78_03355 8abe06f0edf3e5fc9b1603ce45167751 97 ProSitePatterns PS00151 Acylphosphatase signature 2. 39 55 - T 01-11-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_03355 8abe06f0edf3e5fc9b1603ce45167751 97 ProSitePatterns PS00150 Acylphosphatase signature 1. 15 25 - T 01-11-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_03355 8abe06f0edf3e5fc9b1603ce45167751 97 Pfam PF00708 Acylphosphatase 12 95 4.9E-26 T 01-11-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_03355 8abe06f0edf3e5fc9b1603ce45167751 97 Gene3D G3DSA:3.30.70.100 2 96 5.7E-32 T 01-11-2018 DOE78_03355 8abe06f0edf3e5fc9b1603ce45167751 97 PRINTS PR00112 Acylphosphatase signature 10 25 9.0E-5 T 01-11-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_03355 8abe06f0edf3e5fc9b1603ce45167751 97 PRINTS PR00112 Acylphosphatase signature 31 56 9.0E-5 T 01-11-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_03355 8abe06f0edf3e5fc9b1603ce45167751 97 SUPERFAMILY SSF54975 9 96 5.01E-28 T 01-11-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_12030 1f64e07d6c36591e92773ffb9172c1ae 211 Gene3D G3DSA:2.30.30.1210 65 210 1.2E-70 T 01-11-2018 DOE78_12030 1f64e07d6c36591e92773ffb9172c1ae 211 Pfam PF07563 Protein of unknown function (DUF1541) 90 141 5.4E-28 T 01-11-2018 IPR011438 Domain of unknown function DUF1541 DOE78_12030 1f64e07d6c36591e92773ffb9172c1ae 211 Pfam PF07563 Protein of unknown function (DUF1541) 154 205 3.9E-28 T 01-11-2018 IPR011438 Domain of unknown function DUF1541 DOE78_10445 7c29d6ff2d852d131aee1fe5ce41daf0 116 Pfam PF01381 Helix-turn-helix 8 57 1.9E-9 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_10445 7c29d6ff2d852d131aee1fe5ce41daf0 116 SMART SM00530 4 59 3.1E-9 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_10445 7c29d6ff2d852d131aee1fe5ce41daf0 116 SUPERFAMILY SSF47413 3 65 7.51E-12 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_10445 7c29d6ff2d852d131aee1fe5ce41daf0 116 Gene3D G3DSA:1.10.260.40 3 107 5.8E-17 T 01-11-2018 DOE78_10250 5d7541063d3062547aa41ae4bb875ee3 151 Gene3D G3DSA:1.10.10.10 1 144 4.4E-44 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10250 5d7541063d3062547aa41ae4bb875ee3 151 Pfam PF02082 Transcriptional regulator 1 81 1.0E-24 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_10250 5d7541063d3062547aa41ae4bb875ee3 151 SUPERFAMILY SSF46785 2 134 7.37E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10250 5d7541063d3062547aa41ae4bb875ee3 151 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 01-11-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DOE78_10250 5d7541063d3062547aa41ae4bb875ee3 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 8.3E-38 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_08385 d336f6f21278bb4b8f87be8409f17e97 100 Gene3D G3DSA:3.30.1330.30 2 100 2.8E-38 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_08385 d336f6f21278bb4b8f87be8409f17e97 100 SUPERFAMILY SSF55315 4 99 4.71E-26 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_08385 d336f6f21278bb4b8f87be8409f17e97 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 95 1.2E-19 T 01-11-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 DOE78_15650 9e688a16bf66d9ccb27dc6093fa01a8d 488 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 39 282 3.1E-15 T 01-11-2018 DOE78_15650 9e688a16bf66d9ccb27dc6093fa01a8d 488 SUPERFAMILY SSF51905 36 368 5.55E-28 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_15650 9e688a16bf66d9ccb27dc6093fa01a8d 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 38 57 6.3E-5 T 01-11-2018 DOE78_15650 9e688a16bf66d9ccb27dc6093fa01a8d 488 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 221 239 6.3E-5 T 01-11-2018 DOE78_15650 9e688a16bf66d9ccb27dc6093fa01a8d 488 Gene3D G3DSA:3.50.50.60 27 304 5.8E-32 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_11455 8051395cbc50819fce84e81afb43771f 147 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 135 2.3E-15 T 01-11-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like DOE78_11455 8051395cbc50819fce84e81afb43771f 147 Gene3D G3DSA:3.30.530.20 3 146 5.7E-31 T 01-11-2018 IPR023393 START-like domain superfamily DOE78_11455 8051395cbc50819fce84e81afb43771f 147 SUPERFAMILY SSF55961 5 135 1.79E-20 T 01-11-2018 DOE78_10690 8db190f5670c66c09ec911834efe267c 240 Pfam PF00005 ABC transporter 17 165 1.0E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_10690 8db190f5670c66c09ec911834efe267c 240 SMART SM00382 26 213 3.2E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_10690 8db190f5670c66c09ec911834efe267c 240 PIRSF PIRSF039085 1 240 1.2E-111 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DOE78_10690 8db190f5670c66c09ec911834efe267c 240 Gene3D G3DSA:3.40.50.300 1 240 4.8E-80 T 01-11-2018 DOE78_10690 8db190f5670c66c09ec911834efe267c 240 SUPERFAMILY SSF52540 1 235 2.84E-80 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_10690 8db190f5670c66c09ec911834efe267c 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 40.189 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.2E-34 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.2E-34 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.2E-34 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 Pfam PF00347 Ribosomal protein L6 90 164 1.9E-20 T 01-11-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 Pfam PF00347 Ribosomal protein L6 11 82 2.2E-24 T 01-11-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 PIRSF PIRSF002162 1 177 6.8E-50 T 01-11-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 01-11-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 Gene3D G3DSA:3.90.930.12 83 178 4.7E-40 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 SUPERFAMILY SSF56053 83 177 5.18E-35 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 SUPERFAMILY SSF56053 1 82 1.25E-29 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 Gene3D G3DSA:3.90.930.12 1 82 2.7E-35 T 01-11-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00800 ef892e779a979a181919d6a47020d3c0 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.8E-78 T 01-11-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 2.2E-51 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 147 8.0E-73 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 Gene3D G3DSA:3.30.1360.80 1 157 1.9E-61 T 01-11-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 PIRSF PIRSF006160 1 157 5.6E-61 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.2E-40 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.2E-40 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 3.2E-40 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 3.2E-40 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.2E-40 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 SUPERFAMILY SSF63411 4 151 4.85E-59 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DOE78_19545 15375ebf8098323bb78af5413a0d94b2 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.948 T 01-11-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 385 431 8.5E-19 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 SUPERFAMILY SSF52402 19 237 7.38E-55 T 01-11-2018 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 Pfam PF01171 PP-loop family 22 205 6.1E-59 T 01-11-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 Pfam PF09179 TilS substrate binding domain 259 326 1.0E-7 T 01-11-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 209 5.6E-59 T 01-11-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 320 24.909 T 01-11-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 Gene3D G3DSA:1.20.59.30 246 332 2.0E-29 T 01-11-2018 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 SUPERFAMILY SSF56037 354 447 3.14E-20 T 01-11-2018 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 Gene3D G3DSA:3.40.50.620 9 239 1.0E-68 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 Pfam PF11734 TilS substrate C-terminal domain 385 448 1.4E-17 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 SMART SM00977 385 459 1.9E-25 T 01-11-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DOE78_00395 e3bf6a09875b1a2dbfbe61df46044328 464 SUPERFAMILY SSF82829 216 325 5.75E-16 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 Pfam PF00206 Lyase 7 301 1.9E-75 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal DOE78_18565 e792dea8061e691f840674cc071a7b85 464 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 9.9E-30 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 9.9E-30 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 9.9E-30 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 9.9E-30 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_18565 e792dea8061e691f840674cc071a7b85 464 Gene3D G3DSA:1.10.40.30 361 433 6.7E-195 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.0E-23 T 01-11-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 Gene3D G3DSA:1.20.200.10 120 449 6.7E-195 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 Gene3D G3DSA:1.10.275.10 26 230 6.7E-195 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal DOE78_18565 e792dea8061e691f840674cc071a7b85 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 456 5.0E-205 T 01-11-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 44.52 T 01-11-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 SUPERFAMILY SSF48557 7 458 1.88E-148 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 2.0E-70 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 2.0E-70 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 2.0E-70 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.0E-70 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 2.0E-70 T 01-11-2018 DOE78_18565 e792dea8061e691f840674cc071a7b85 464 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.0E-70 T 01-11-2018 DOE78_02540 291cdabdabdd752ebcb59b611569e543 347 Gene3D G3DSA:3.40.50.2300 142 279 3.0E-114 T 01-11-2018 DOE78_02540 291cdabdabdd752ebcb59b611569e543 347 Pfam PF13407 Periplasmic binding protein domain 42 297 2.1E-59 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_02540 291cdabdabdd752ebcb59b611569e543 347 Gene3D G3DSA:3.40.50.2300 44 339 3.0E-114 T 01-11-2018 DOE78_02540 291cdabdabdd752ebcb59b611569e543 347 SUPERFAMILY SSF53822 39 343 2.2E-61 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_02540 291cdabdabdd752ebcb59b611569e543 347 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 43 344 8.3E-113 T 01-11-2018 IPR013459 Rhamnose ABC transporter, substrate-binding protein RhaS GO:0015762 DOE78_23565 59622c580865595bbf955b45bcfa5739 555 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 474 1.4E-59 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_23565 59622c580865595bbf955b45bcfa5739 555 Pfam PF00474 Sodium:solute symporter family 34 290 3.2E-39 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_23565 59622c580865595bbf955b45bcfa5739 555 Pfam PF00474 Sodium:solute symporter family 359 474 1.1E-19 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_23565 59622c580865595bbf955b45bcfa5739 555 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 9 536 3.5E-221 T 01-11-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily DOE78_23565 59622c580865595bbf955b45bcfa5739 555 Gene3D G3DSA:1.20.1730.10 21 548 9.6E-71 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 PRINTS PR01607 Apyrase family signature 1063 1086 1.5E-38 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 PRINTS PR01607 Apyrase family signature 1138 1157 1.5E-38 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 PRINTS PR01607 Apyrase family signature 717 735 1.5E-38 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 PRINTS PR01607 Apyrase family signature 912 935 1.5E-38 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 PRINTS PR01607 Apyrase family signature 893 910 1.5E-38 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 PRINTS PR01607 Apyrase family signature 943 963 1.5E-38 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 Gene3D G3DSA:2.60.40.10 1293 1369 8.2E-16 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 Gene3D G3DSA:2.60.40.10 1209 1286 1.0E-12 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 ProSitePatterns PS00785 5'-nucleotidase signature 1. 719 731 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 SUPERFAMILY SSF55816 1004 1202 3.66E-60 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 Gene3D G3DSA:3.60.21.10 717 1004 1.1E-95 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 Gene3D G3DSA:3.90.780.10 1005 1203 4.0E-70 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 Gene3D G3DSA:3.60.10.10 409 709 7.6E-41 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 Pfam PF00149 Calcineurin-like phosphoesterase 720 929 3.4E-12 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 SUPERFAMILY SSF56219 407 708 2.59E-31 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 SUPERFAMILY SSF56300 714 1001 1.26E-79 T 01-11-2018 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 Pfam PF02872 5'-nucleotidase, C-terminal domain 1005 1164 3.7E-45 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_01750 0556d2c6b847f3e36115be3539dc3677 1378 ProSitePatterns PS00786 5'-nucleotidase signature 2. 783 794 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 153 167 2.1E-5 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 134 146 2.1E-5 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 248 256 2.1E-5 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 Pfam PF00246 Zinc carboxypeptidase 118 336 2.4E-28 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 Gene3D G3DSA:3.10.350.10 4 51 1.6E-8 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 Gene3D G3DSA:3.10.350.10 52 96 1.6E-8 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 SUPERFAMILY SSF53187 108 393 2.08E-55 T 01-11-2018 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 Gene3D G3DSA:3.40.630.10 105 395 1.7E-51 T 01-11-2018 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 SMART SM00631 109 384 1.1E-28 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 Pfam PF01476 LysM domain 4 46 0.13 T 01-11-2018 IPR018392 LysM domain DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 SMART SM00257 2 46 0.011 T 01-11-2018 IPR018392 LysM domain DOE78_17115 3a97c65071571659918c09ceb1c0d935 395 SMART SM00257 52 96 0.99 T 01-11-2018 IPR018392 LysM domain DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 Gene3D G3DSA:3.40.50.720 5 178 6.6E-61 T 01-11-2018 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 491 85.518 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 SUPERFAMILY SSF55347 185 490 7.19E-114 T 01-11-2018 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 Gene3D G3DSA:3.30.360.10 179 491 1.2E-123 T 01-11-2018 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 489 6.3E-115 T 01-11-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 SUPERFAMILY SSF51735 8 193 3.15E-60 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 222 239 2.6E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 198 2.6E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 331 357 2.6E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 146 159 2.6E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 240 256 2.6E-47 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 1.1E-199 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 190 1.1E-63 T 01-11-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 180 186 - T 01-11-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_16685 d3ff86a6697403edee7836a2f838bb09 500 PIRSF PIRSF000110 1 493 1.9E-189 T 01-11-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 38.069 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 SUPERFAMILY SSF55821 2 199 9.16E-82 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 196 1.1E-82 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 393 55.632 T 01-11-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 Gene3D G3DSA:3.90.870.10 1 203 2.8E-86 T 01-11-2018 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 Pfam PF00925 GTP cyclohydrolase II 206 371 1.8E-76 T 01-11-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 197 2.2E-77 T 01-11-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 207 395 3.2E-81 T 01-11-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 PIRSF PIRSF001259 1 397 8.3E-189 T 01-11-2018 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 SUPERFAMILY SSF142695 202 374 6.67E-76 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 397 42.868 T 01-11-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_24045 8526ca43d1b68325a6fca392e7c314f0 397 Gene3D G3DSA:3.40.50.10990 204 374 9.0E-79 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_07730 b803334773d4e1402aada35728f40f59 261 Pfam PF03799 Cell division protein FtsQ 123 238 2.0E-9 T 01-11-2018 IPR005548 Cell division protein FtsQ/DivIB DOE78_07730 b803334773d4e1402aada35728f40f59 261 Pfam PF08478 POTRA domain, FtsQ-type 51 118 2.8E-18 T 01-11-2018 IPR013685 POTRA domain, FtsQ-type DOE78_07730 b803334773d4e1402aada35728f40f59 261 Hamap MF_00912 Cell division protein DivIB [divIB]. 9 252 29.691 T 01-11-2018 IPR026580 Cell division protein DivIB DOE78_07730 b803334773d4e1402aada35728f40f59 261 Gene3D G3DSA:3.40.50.10960 117 233 3.5E-40 T 01-11-2018 DOE78_07730 b803334773d4e1402aada35728f40f59 261 Gene3D G3DSA:3.10.20.310 50 116 2.2E-5 T 01-11-2018 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 2.1E-34 T 01-11-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 SMART SM00663 224 503 3.2E-186 T 01-11-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 SUPERFAMILY SSF64484 5 1182 0.0 T 01-11-2018 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Gene3D G3DSA:1.10.1790.20 950 1128 1.8E-65 T 01-11-2018 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Pfam PF04997 RNA polymerase Rpb1, domain 1 7 331 1.1E-88 T 01-11-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1192 18.708 T 01-11-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 01-11-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 1.0E-14 T 01-11-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Gene3D G3DSA:1.10.150.390 1130 1191 5.6E-29 T 01-11-2018 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 474 2.5E-29 T 01-11-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 385 2.1E-9 T 01-11-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Gene3D G3DSA:2.40.50.100 966 1029 1.8E-65 T 01-11-2018 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Gene3D G3DSA:1.10.132.30 660 794 3.0E-60 T 01-11-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Gene3D G3DSA:1.10.274.100 479 659 1.5E-45 T 01-11-2018 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1129 6.3E-67 T 01-11-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00670 a68ebc1535589f8f61e4fa83346c54be 1198 Gene3D G3DSA:1.10.40.90 363 405 4.0E-24 T 01-11-2018 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 Gene3D G3DSA:2.60.120.10 6 95 1.9E-14 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 5.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 5.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 Pfam PF02311 AraC-like ligand binding domain 29 130 2.0E-11 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 SUPERFAMILY SSF46689 234 283 1.08E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 Pfam PF12833 Helix-turn-helix domain 204 282 6.7E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 Gene3D G3DSA:1.10.10.60 182 231 6.9E-16 T 01-11-2018 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 Gene3D G3DSA:1.10.10.60 232 286 2.0E-15 T 01-11-2018 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 SUPERFAMILY SSF51182 27 113 1.02E-12 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 SMART SM00342 198 281 1.7E-27 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_22450 079ca54ac6449ff47ec66ceb213be1ce 294 SUPERFAMILY SSF46689 181 231 2.78E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04875 dee3be5dfc00b2cc6383f3783ca1144f 116 Gene3D G3DSA:1.10.10.10 1 114 1.3E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04875 dee3be5dfc00b2cc6383f3783ca1144f 116 SUPERFAMILY SSF46785 13 106 4.17E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04875 dee3be5dfc00b2cc6383f3783ca1144f 116 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 1.2E-24 T 01-11-2018 IPR005149 Transcription regulator PadR, N-terminal DOE78_04675 6dd38adc523879472131900166b93e9b 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_04675 6dd38adc523879472131900166b93e9b 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 255 1.3E-58 T 01-11-2018 DOE78_04675 6dd38adc523879472131900166b93e9b 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 182 0.0045 T 01-11-2018 DOE78_04675 6dd38adc523879472131900166b93e9b 258 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 11 258 2.5E-105 T 01-11-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 7.2E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.2E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 7.2E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 7.2E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 7.2E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 7.2E-41 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 7.9E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.9E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 7.9E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04675 6dd38adc523879472131900166b93e9b 258 SUPERFAMILY SSF51735 14 257 6.72E-79 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_04675 6dd38adc523879472131900166b93e9b 258 Gene3D G3DSA:3.40.50.720 7 258 9.5E-79 T 01-11-2018 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 34 388 5.1E-16 T 01-11-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 41.239 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 430 2.2E-157 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 SUPERFAMILY SSF51419 30 299 2.76E-79 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 1.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 1.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 1.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 1.3E-30 T 01-11-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 1.3E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.3E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.3E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 1.3E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 1.3E-18 T 01-11-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 01-11-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 296 2.5E-73 T 01-11-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 237 250 - T 01-11-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 SUPERFAMILY SSF50621 276 431 2.09E-52 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 Gene3D G3DSA:3.20.20.10 38 297 3.4E-154 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_16390 c4d8c22c154951ba679f8a7dcdd4dacc 439 Gene3D G3DSA:2.40.37.10 17 427 3.4E-154 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 4.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 4.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 4.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 4.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 SUPERFAMILY SSF47384 197 263 1.71E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 SUPERFAMILY SSF55874 255 411 4.45E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 SMART SM00387 306 413 1.2E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 410 2.5E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 SMART SM00388 199 265 4.7E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 Gene3D G3DSA:3.30.565.10 263 410 7.1E-61 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 261 3.1E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10910 2a6d41823eedea3c88be2d357b852177 428 Gene3D G3DSA:1.10.287.130 205 262 7.1E-61 T 01-11-2018 DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 ProSitePatterns PS01229 Hypothetical cof family signature 2. 207 229 - T 01-11-2018 DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 01-11-2018 DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 SUPERFAMILY SSF56784 6 254 7.48E-65 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 252 8.2E-61 T 01-11-2018 DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 226 2.2E-18 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 Gene3D G3DSA:3.30.1240.10 82 182 2.2E-75 T 01-11-2018 DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 Gene3D G3DSA:3.40.50.1000 6 249 2.2E-75 T 01-11-2018 IPR023214 HAD superfamily DOE78_21805 b6b2469c65bd7e32b10a98aa69556cc7 259 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 252 8.7E-58 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 215 458 2.0E-88 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 Gene3D G3DSA:3.40.50.720 222 385 4.6E-169 T 01-11-2018 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 SUPERFAMILY SSF53223 18 209 4.48E-75 T 01-11-2018 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 Gene3D G3DSA:3.40.50.10860 67 202 4.6E-169 T 01-11-2018 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 248 268 6.1E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 206 228 6.1E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 126 140 6.1E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 384 395 6.1E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 Gene3D G3DSA:1.10.285.10 18 394 4.6E-169 T 01-11-2018 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 SMART SM00839 217 458 1.0E-89 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 69 197 1.8E-52 T 01-11-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 PIRSF PIRSF000185 34 460 2.1E-124 T 01-11-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 SUPERFAMILY SSF51735 215 459 1.88E-76 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_10710 4686a6c63bb64fb0ada441e827c3b44c 460 Gene3D G3DSA:1.10.285.10 395 460 4.7E-11 T 01-11-2018 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 Gene3D G3DSA:1.20.5.100 197 228 4.4E-18 T 01-11-2018 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 1.6E-64 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 Gene3D G3DSA:3.40.50.720 1 196 4.1E-74 T 01-11-2018 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 413 8.3E-32 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 SUPERFAMILY SSF48179 198 295 6.46E-31 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 SMART SM00984 313 415 3.7E-43 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 PIRSF PIRSF000124 1 431 2.8E-145 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 SUPERFAMILY SSF52413 301 419 7.19E-33 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 9.6E-38 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 SUPERFAMILY SSF51735 1 193 4.93E-55 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 Gene3D G3DSA:3.40.50.720 229 438 2.4E-72 T 01-11-2018 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 6.3E-143 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_24175 a8fbfdd81bd11af90c46e3783a38acbc 439 PIRSF PIRSF500134 1 434 7.8E-170 T 01-11-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 Gene3D G3DSA:3.40.50.720 1 161 1.6E-32 T 01-11-2018 DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 97 4.4E-17 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 262 5.1E-15 T 01-11-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 PIRSF PIRSF000193 1 266 3.2E-63 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 Gene3D G3DSA:1.10.3730.10 162 262 1.2E-13 T 01-11-2018 DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 SUPERFAMILY SSF51735 2 155 9.89E-24 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_17555 22656d77f890c9277dbe9a599c1019fc 279 SUPERFAMILY SSF48179 158 262 6.46E-18 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_14610 f85d2316d4eb2aa49d3b18ea57deb0bd 368 Gene3D G3DSA:3.90.1150.10 279 368 6.7E-27 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_14610 f85d2316d4eb2aa49d3b18ea57deb0bd 368 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 361 3.6E-137 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_14610 f85d2316d4eb2aa49d3b18ea57deb0bd 368 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_14610 f85d2316d4eb2aa49d3b18ea57deb0bd 368 PIRSF PIRSF001434 1 365 7.4E-127 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_14610 f85d2316d4eb2aa49d3b18ea57deb0bd 368 Gene3D G3DSA:3.40.640.10 3 245 1.2E-87 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_14610 f85d2316d4eb2aa49d3b18ea57deb0bd 368 Gene3D G3DSA:3.90.1150.10 246 278 1.1E-8 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_14610 f85d2316d4eb2aa49d3b18ea57deb0bd 368 SUPERFAMILY SSF53383 13 362 2.93E-105 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_01355 e5284d09a4edfffced61dc214105a1df 133 Gene3D G3DSA:3.30.565.10 7 131 9.0E-18 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_01355 e5284d09a4edfffced61dc214105a1df 133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 129 1.1E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_01355 e5284d09a4edfffced61dc214105a1df 133 SUPERFAMILY SSF55874 21 129 1.15E-15 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_01355 e5284d09a4edfffced61dc214105a1df 133 SMART SM00387 34 133 4.3E-4 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13670 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 Pfam PF01625 Peptide methionine sulfoxide reductase 4 146 6.3E-38 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_13670 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 Gene3D G3DSA:3.30.1060.10 1 155 5.8E-36 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_13670 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 24.425 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_13670 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 SUPERFAMILY SSF55068 1 147 8.76E-45 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_02230 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 Pfam PF01625 Peptide methionine sulfoxide reductase 4 146 6.3E-38 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_02230 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 Gene3D G3DSA:3.30.1060.10 1 155 5.8E-36 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_02230 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 24.425 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_02230 d2bcba3f8b5ba365dd39d7ad5ad3c4dd 156 SUPERFAMILY SSF55068 1 147 8.76E-45 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 SUPERFAMILY SSF53784 2 315 6.8E-118 T 01-11-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 3.7E-88 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 PIRSF PIRSF000532 1 319 3.7E-124 T 01-11-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 Pfam PF00365 Phosphofructokinase 3 275 9.1E-114 T 01-11-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 1.4E-140 T 01-11-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 48.989 T 01-11-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 Gene3D G3DSA:3.40.50.450 3 278 5.8E-120 T 01-11-2018 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 Gene3D G3DSA:3.40.50.460 142 251 5.8E-120 T 01-11-2018 DOE78_18480 c7fb57a65fc35ad5bd0861bbc1db56d4 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 01-11-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12715 319807a98fe5f3ef197e662dc5139135 542 SUPERFAMILY SSF54373 370 477 1.05E-22 T 01-11-2018 DOE78_12715 319807a98fe5f3ef197e662dc5139135 542 Gene3D G3DSA:3.90.660.10 105 473 1.2E-176 T 01-11-2018 DOE78_12715 319807a98fe5f3ef197e662dc5139135 542 Gene3D G3DSA:3.50.50.60 67 525 1.2E-176 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_12715 319807a98fe5f3ef197e662dc5139135 542 SUPERFAMILY SSF51905 64 530 2.07E-59 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_12715 319807a98fe5f3ef197e662dc5139135 542 Gene3D G3DSA:1.20.1440.240 182 282 1.2E-176 T 01-11-2018 DOE78_12715 319807a98fe5f3ef197e662dc5139135 542 Pfam PF01593 Flavin containing amine oxidoreductase 75 527 1.5E-57 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DOE78_22285 333adf40927fa2f894955c8737e0b437 331 Pfam PF03773 Predicted permease 39 326 3.2E-67 T 01-11-2018 IPR005524 Predicted permease DUF318 DOE78_06525 5299b5d535eedb539523e5fc5d75b36f 320 Gene3D G3DSA:3.40.50.2300 136 302 4.6E-79 T 01-11-2018 DOE78_06525 5299b5d535eedb539523e5fc5d75b36f 320 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 32 319 4.6E-62 T 01-11-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DOE78_06525 5299b5d535eedb539523e5fc5d75b36f 320 Gene3D G3DSA:3.40.50.2300 44 286 4.6E-79 T 01-11-2018 DOE78_06525 5299b5d535eedb539523e5fc5d75b36f 320 SUPERFAMILY SSF53822 31 233 1.91E-17 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 Gene3D G3DSA:1.10.3730.10 165 266 7.6E-36 T 01-11-2018 DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 4.9E-18 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 SUPERFAMILY SSF51735 4 159 1.39E-32 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 265 5.8E-82 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 Gene3D G3DSA:3.40.50.720 2 164 2.2E-49 T 01-11-2018 DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.488 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 262 1.7E-36 T 01-11-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 PIRSF PIRSF000193 2 269 1.2E-80 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_05480 ebebf4bdb7d5e1582353b76ab4b16321 270 SUPERFAMILY SSF48179 162 268 3.91E-35 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 SUPERFAMILY SSF46785 395 538 3.81E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Pfam PF00270 DEAD/DEAH box helicase 21 181 1.7E-19 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 SMART SM00956 404 507 3.2E-38 T 01-11-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 585 2.3E-240 T 01-11-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 SMART SM00490 243 324 7.2E-27 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 SMART SM00341 513 593 3.6E-22 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 SUPERFAMILY SSF52540 58 345 3.43E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Pfam PF00570 HRDC domain 517 583 5.7E-24 T 01-11-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Gene3D G3DSA:3.40.50.300 202 333 4.0E-39 T 01-11-2018 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Gene3D G3DSA:3.40.50.300 1 201 2.0E-78 T 01-11-2018 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Gene3D G3DSA:1.10.150.80 510 589 1.8E-27 T 01-11-2018 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 SUPERFAMILY SSF47819 514 587 4.14E-26 T 01-11-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Pfam PF00271 Helicase conserved C-terminal domain 220 323 3.2E-18 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Pfam PF16124 RecQ zinc-binding 335 397 2.4E-16 T 01-11-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Pfam PF09382 RQC domain 400 509 1.1E-30 T 01-11-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 3.8E-147 T 01-11-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 Gene3D G3DSA:1.10.10.10 334 509 1.1E-47 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_21000 da21be84862ec32585ae49a925b3f8db 593 SMART SM00487 14 211 1.1E-29 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_24500 f4a93c234e5a58e58a86fd69cafcfc91 390 Gene3D G3DSA:2.30.40.10 4 390 8.5E-155 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_24500 f4a93c234e5a58e58a86fd69cafcfc91 390 SUPERFAMILY SSF51338 3 389 1.1E-20 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_24500 f4a93c234e5a58e58a86fd69cafcfc91 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 3 390 1.5E-175 T 01-11-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 DOE78_24500 f4a93c234e5a58e58a86fd69cafcfc91 390 SUPERFAMILY SSF51556 57 347 1.86E-74 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_24500 f4a93c234e5a58e58a86fd69cafcfc91 390 Pfam PF01979 Amidohydrolase family 54 376 5.1E-22 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_24500 f4a93c234e5a58e58a86fd69cafcfc91 390 Gene3D G3DSA:3.20.20.140 58 343 8.5E-155 T 01-11-2018 DOE78_24500 f4a93c234e5a58e58a86fd69cafcfc91 390 PIRSF PIRSF001238 1 390 3.1E-166 T 01-11-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 DOE78_02770 e98eea94cbac353e56fd447687834632 795 Gene3D G3DSA:3.20.20.80 253 418 9.3E-67 T 01-11-2018 DOE78_02770 e98eea94cbac353e56fd447687834632 795 Gene3D G3DSA:3.20.20.80 419 597 1.8E-71 T 01-11-2018 DOE78_02770 e98eea94cbac353e56fd447687834632 795 Pfam PF01055 Glycosyl hydrolases family 31 232 673 4.5E-162 T 01-11-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DOE78_02770 e98eea94cbac353e56fd447687834632 795 SUPERFAMILY SSF51445 241 587 2.74E-96 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_02770 e98eea94cbac353e56fd447687834632 795 SUPERFAMILY SSF51011 589 668 1.8E-23 T 01-11-2018 DOE78_02770 e98eea94cbac353e56fd447687834632 795 Pfam PF13802 Galactose mutarotase-like 146 212 5.5E-23 T 01-11-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain DOE78_02770 e98eea94cbac353e56fd447687834632 795 Gene3D G3DSA:2.60.40.1760 27 251 8.2E-57 T 01-11-2018 DOE78_02770 e98eea94cbac353e56fd447687834632 795 Pfam PF17137 Domain of unknown function (DUF5110) 688 756 3.6E-12 T 01-11-2018 IPR033403 Domain of unknown function DUF5110 DOE78_02770 e98eea94cbac353e56fd447687834632 795 SUPERFAMILY SSF74650 6 239 1.44E-54 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_02770 e98eea94cbac353e56fd447687834632 795 ProSitePatterns PS00129 Glycosyl hydrolases family 31 active site. 402 409 - T 01-11-2018 IPR030458 Glycosyl hydrolases family 31, active site DOE78_02770 e98eea94cbac353e56fd447687834632 795 Pfam PF16338 Domain of unknown function (DUF4968) 34 123 1.6E-20 T 01-11-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 DOE78_02770 e98eea94cbac353e56fd447687834632 795 Gene3D G3DSA:2.60.40.1180 598 669 7.9E-23 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_02770 e98eea94cbac353e56fd447687834632 795 Gene3D G3DSA:2.60.40.1180 670 785 3.4E-17 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_06880 5ab1c5caf792d25981180dd86cb939d7 343 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 6 337 5.2E-90 T 01-11-2018 IPR014227 Putative transport protein YtvI-like DOE78_06880 5ab1c5caf792d25981180dd86cb939d7 343 Pfam PF01594 AI-2E family transporter 6 331 3.6E-45 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Pfam PF00989 PAS fold 141 227 1.2E-8 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SMART SM00387 372 479 1.1E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Gene3D G3DSA:1.10.287.130 252 329 3.1E-17 T 01-11-2018 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Gene3D G3DSA:3.30.450.20 17 125 4.9E-14 T 01-11-2018 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 6.6E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 6.6E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 6.6E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 6.6E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SMART SM00091 140 208 1.9E-5 T 01-11-2018 IPR000014 PAS domain DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SMART SM00091 20 88 0.0034 T 01-11-2018 IPR000014 PAS domain DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 258 9.5E-15 T 01-11-2018 IPR000014 PAS domain DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 135 1.1E-7 T 01-11-2018 IPR000014 PAS domain DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Pfam PF13426 PAS domain 31 127 0.0032 T 01-11-2018 IPR000014 PAS domain DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Gene3D G3DSA:3.30.450.20 126 249 5.5E-21 T 01-11-2018 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Gene3D G3DSA:3.30.565.10 333 479 4.2E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 328 2.1E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SUPERFAMILY SSF55874 320 477 2.36E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SUPERFAMILY SSF55785 125 249 1.64E-19 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SMART SM00388 266 330 8.2E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 478 1.5E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SUPERFAMILY SSF55785 31 137 1.36E-13 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_07000 dd24a7af0c53547f86c6e84953d6a6ef 479 SUPERFAMILY SSF47384 263 328 1.0E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_04685 fbfd9d107a2b594ea9cbef85211929b1 331 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 3.2E-158 T 01-11-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 DOE78_04685 fbfd9d107a2b594ea9cbef85211929b1 331 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 36.926 T 01-11-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DOE78_04685 fbfd9d107a2b594ea9cbef85211929b1 331 Pfam PF03812 2-keto-3-deoxygluconate permease 3 311 1.1E-114 T 01-11-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DOE78_04685 fbfd9d107a2b594ea9cbef85211929b1 331 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 310 8.0E-99 T 01-11-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 TIGRFAM TIGR01178 ade: adenine deaminase 20 571 3.1E-194 T 01-11-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 Gene3D G3DSA:2.30.40.10 12 348 1.6E-129 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 Hamap MF_01518 Adenine deaminase [ade]. 20 575 38.576 T 01-11-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 SUPERFAMILY SSF51556 71 318 2.72E-35 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 Gene3D G3DSA:3.20.20.140 70 313 1.6E-129 T 01-11-2018 DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 Pfam PF01979 Amidohydrolase family 66 348 2.1E-32 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 SUPERFAMILY SSF51338 11 352 8.08E-19 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_24300 7508b240f076494d18f273ded8f33d8b 576 Pfam PF13382 Adenine deaminase C-terminal domain 403 571 5.7E-62 T 01-11-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DOE78_16020 ba442f12beac8deeaf07c7dd4cbcd627 168 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 7 36 3.7E-6 T 01-11-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 DOE78_16020 ba442f12beac8deeaf07c7dd4cbcd627 168 SUPERFAMILY SSF50022 4 159 2.1E-30 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_16020 ba442f12beac8deeaf07c7dd4cbcd627 168 Pfam PF00355 Rieske [2Fe-2S] domain 80 149 3.0E-14 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DOE78_16020 ba442f12beac8deeaf07c7dd4cbcd627 168 Gene3D G3DSA:2.102.10.10 53 167 3.5E-23 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_16020 ba442f12beac8deeaf07c7dd4cbcd627 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 96 107 8.1E-5 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DOE78_16020 ba442f12beac8deeaf07c7dd4cbcd627 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 120 132 8.1E-5 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 Pfam PF13396 Phospholipase_D-nuclease N-terminal 39 81 9.1E-8 T 01-11-2018 IPR027379 Cardiolipin synthase N-terminal DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 Pfam PF13091 PLD-like domain 345 469 3.6E-28 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 Pfam PF13091 PLD-like domain 156 299 3.2E-12 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 SMART SM00155 416 443 2.2E-7 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 SMART SM00155 239 266 2.4E-5 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 Hamap MF_01916 Cardiolipin synthase. 33 503 42.787 T 01-11-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 SUPERFAMILY SSF56024 120 332 4.4E-50 T 01-11-2018 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 Gene3D G3DSA:3.30.870.10 136 319 1.0E-45 T 01-11-2018 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 Gene3D G3DSA:3.30.870.10 320 499 1.1E-31 T 01-11-2018 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 34 503 4.6E-185 T 01-11-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DOE78_06645 3ac65cabf5d77a5a48fe85b0c9adf785 503 SUPERFAMILY SSF56024 291 489 2.69E-47 T 01-11-2018 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 SUPERFAMILY SSF53067 144 327 1.11E-47 T 01-11-2018 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 1.2E-55 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.2E-55 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.2E-55 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.2E-55 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.2E-55 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 Pfam PF06723 MreB/Mbl protein 6 330 3.0E-142 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 330 3.9E-137 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 Gene3D G3DSA:3.90.640.10 181 254 1.4E-122 T 01-11-2018 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 Gene3D G3DSA:3.30.420.40 7 322 1.4E-122 T 01-11-2018 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 SUPERFAMILY SSF53067 6 143 4.95E-40 T 01-11-2018 DOE78_08625 04eebba86340aceb0025d9e9d156efee 335 Gene3D G3DSA:3.30.420.40 149 312 1.4E-122 T 01-11-2018 DOE78_04015 82c6bb64251fb98f0821c756a8adec8e 495 PIRSF PIRSF006005 1 495 3.2E-223 T 01-11-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04015 82c6bb64251fb98f0821c756a8adec8e 495 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 259 276 - T 01-11-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04015 82c6bb64251fb98f0821c756a8adec8e 495 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 247 440 1.2E-36 T 01-11-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DOE78_04015 82c6bb64251fb98f0821c756a8adec8e 495 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 7 494 4.8E-216 T 01-11-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04015 82c6bb64251fb98f0821c756a8adec8e 495 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 495 257.39 T 01-11-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04015 82c6bb64251fb98f0821c756a8adec8e 495 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 20 230 5.4E-35 T 01-11-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DOE78_15250 a5b12df7b19795939d7c7d5e62a32629 259 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 254 16.893 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DOE78_15250 a5b12df7b19795939d7c7d5e62a32629 259 Pfam PF02673 Bacitracin resistance protein BacA 6 249 4.5E-70 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 266 8.7E-84 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 26.079 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 SUPERFAMILY SSF48179 161 269 1.11E-34 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 Gene3D G3DSA:3.40.50.720 2 164 6.1E-46 T 01-11-2018 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 PIRSF PIRSF000193 1 269 1.3E-79 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 Gene3D G3DSA:1.10.3730.10 165 271 7.9E-40 T 01-11-2018 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 3.5E-37 T 01-11-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 99 1.5E-18 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOE78_16600 93ce13fb0b87550a8326ca0bbee91510 281 SUPERFAMILY SSF51735 3 160 1.85E-29 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 Gene3D G3DSA:3.40.50.2300 74 312 3.6E-63 T 01-11-2018 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.0E-18 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 Gene3D G3DSA:3.40.50.2300 166 295 3.6E-63 T 01-11-2018 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.0E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 9.0E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 SMART SM00354 2 72 2.8E-26 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 SUPERFAMILY SSF47413 3 61 2.67E-18 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 Pfam PF13377 Periplasmic binding protein-like domain 174 334 5.8E-39 T 01-11-2018 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 SUPERFAMILY SSF53822 71 335 2.94E-62 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 Gene3D G3DSA:1.10.260.40 1 59 1.7E-22 T 01-11-2018 DOE78_21425 f9c885b24c3cdefde43cb462bed1f768 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Pfam PF04324 BFD-like [2Fe-2S] binding domain 418 467 9.2E-14 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Pfam PF04324 BFD-like [2Fe-2S] binding domain 484 533 2.7E-10 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 792 0.0 T 01-11-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Gene3D G3DSA:3.30.390.30 316 398 6.1E-7 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Gene3D G3DSA:3.30.413.10 628 800 2.3E-41 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 676 692 - T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 9.0E-13 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 9.0E-13 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 9.0E-13 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.0E-13 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 SUPERFAMILY SSF51905 2 190 8.21E-43 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Gene3D G3DSA:3.50.50.60 7 280 2.1E-93 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00397 Sirohaem Fe-binding site signature 676 694 5.5E-8 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00397 Sirohaem Fe-binding site signature 633 651 5.5E-8 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 2.6E-23 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.6E-23 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.6E-23 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.6E-23 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.6E-23 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 SUPERFAMILY SSF55124 496 620 4.25E-22 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 280 1.5E-57 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 SUPERFAMILY SSF51905 143 305 1.2E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 629 765 6.8E-30 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 PIRSF PIRSF037149 1 810 0.0 T 01-11-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 SUPERFAMILY SSF56014 630 787 3.93E-50 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 620 4.4E-12 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Gene3D G3DSA:1.10.10.1100 418 473 1.9E-10 T 01-11-2018 DOE78_13285 1131b79528f75f847da1f441397dbdc5 811 Gene3D G3DSA:3.50.50.60 110 244 2.1E-93 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_06195 9bbf657d4748446b5fb268cab3cb7dd6 205 Pfam PF10737 Spore germination protein GerPC 23 196 1.2E-50 T 01-11-2018 IPR019673 Spore germination protein GerPC DOE78_02680 d817960b011d33e372e26c8664ba7ae2 829 SUPERFAMILY SSF82866 449 804 5.23E-5 T 01-11-2018 DOE78_02680 d817960b011d33e372e26c8664ba7ae2 829 Pfam PF02687 FtsX-like permease family 730 820 1.3E-12 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_02680 d817960b011d33e372e26c8664ba7ae2 829 Pfam PF02687 FtsX-like permease family 289 383 5.6E-9 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_02680 d817960b011d33e372e26c8664ba7ae2 829 Pfam PF12704 MacB-like periplasmic core domain 18 231 7.3E-13 T 01-11-2018 IPR025857 MacB-like periplasmic core domain DOE78_02680 d817960b011d33e372e26c8664ba7ae2 829 Pfam PF12704 MacB-like periplasmic core domain 472 663 2.4E-7 T 01-11-2018 IPR025857 MacB-like periplasmic core domain DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 4.3E-101 T 01-11-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 SUPERFAMILY SSF54849 136 204 9.39E-26 T 01-11-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 1.1E-256 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 PRINTS PR00298 60kDa chaperonin signature 82 109 4.5E-73 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 PRINTS PR00298 60kDa chaperonin signature 348 373 4.5E-73 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 PRINTS PR00298 60kDa chaperonin signature 26 52 4.5E-73 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 PRINTS PR00298 60kDa chaperonin signature 396 417 4.5E-73 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 PRINTS PR00298 60kDa chaperonin signature 266 289 4.5E-73 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 Gene3D G3DSA:3.30.260.10 135 408 4.6E-234 T 01-11-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 01-11-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 Gene3D G3DSA:3.50.7.10 190 370 4.6E-234 T 01-11-2018 IPR027409 GroEL-like apical domain superfamily DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 Hamap MF_00600 60 kDa chaperonin [groL]. 1 540 42.294 T 01-11-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 Gene3D G3DSA:1.10.560.10 7 518 4.6E-234 T 01-11-2018 IPR027413 GroEL-like equatorial domain superfamily DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 SUPERFAMILY SSF48592 5 518 2.91E-80 T 01-11-2018 IPR027413 GroEL-like equatorial domain superfamily DOE78_01530 1bd9e6879e91edcd6c58a04fe93db83d 541 SUPERFAMILY SSF52029 183 374 4.34E-84 T 01-11-2018 IPR027409 GroEL-like apical domain superfamily DOE78_04945 3e190ecc8420a629c9f0204f768f226d 284 Gene3D G3DSA:3.20.20.140 1 278 2.4E-49 T 01-11-2018 DOE78_04945 3e190ecc8420a629c9f0204f768f226d 284 SUPERFAMILY SSF51556 1 277 7.85E-40 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_04945 3e190ecc8420a629c9f0204f768f226d 284 Pfam PF04909 Amidohydrolase 69 277 3.4E-26 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_08930 3e66d41e69e53a3d07896e9029181e29 433 Pfam PF13416 Bacterial extracellular solute-binding protein 60 342 3.2E-26 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_08930 3e66d41e69e53a3d07896e9029181e29 433 Gene3D G3DSA:3.40.190.10 153 425 1.2E-134 T 01-11-2018 DOE78_08930 3e66d41e69e53a3d07896e9029181e29 433 SUPERFAMILY SSF53850 18 429 5.43E-59 T 01-11-2018 DOE78_08930 3e66d41e69e53a3d07896e9029181e29 433 Gene3D G3DSA:3.40.190.10 44 376 1.2E-134 T 01-11-2018 DOE78_06395 64c6614b060bb098a78dbf6a499d1ce4 276 PIRSF PIRSF006483 2 276 2.5E-96 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_06395 64c6614b060bb098a78dbf6a499d1ce4 276 Gene3D G3DSA:3.30.70.120 189 264 1.2E-20 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_06395 64c6614b060bb098a78dbf6a499d1ce4 276 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 217 271 8.1E-19 T 01-11-2018 IPR019264 Domain of unknown function DUF2179 DOE78_06395 64c6614b060bb098a78dbf6a499d1ce4 276 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 211 8.5E-62 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 SUPERFAMILY SSF55261 294 421 1.96E-44 T 01-11-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 585 1.7E-260 T 01-11-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 Gene3D G3DSA:2.40.50.140 1 109 8.5E-33 T 01-11-2018 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 Gene3D G3DSA:3.30.1360.30 277 421 5.3E-196 T 01-11-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 Gene3D G3DSA:3.30.930.10 121 583 5.3E-196 T 01-11-2018 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 SUPERFAMILY SSF50249 4 108 1.31E-31 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 Pfam PF01336 OB-fold nucleic acid binding domain 21 105 1.4E-16 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 SUPERFAMILY SSF55681 114 586 4.24E-108 T 01-11-2018 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 212 225 9.4E-27 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 9.4E-27 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 9.4E-27 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 195 207 9.4E-27 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 586 34.776 T 01-11-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 559 3.3E-110 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_17765 2bbc492a02fb8d19a391f4ce4dbd9c02 592 Pfam PF02938 GAD domain 313 407 9.2E-32 T 01-11-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DOE78_04270 0bc00e15532760cfc5abef6c9b93cb7f 346 SMART SM01126 152 315 1.8E-42 T 01-11-2018 IPR024445 ISXO2-like transposase domain DOE78_04270 0bc00e15532760cfc5abef6c9b93cb7f 346 Pfam PF12762 ISXO2-like transposase domain 153 307 4.2E-18 T 01-11-2018 IPR024445 ISXO2-like transposase domain DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 SMART SM00382 30 218 5.3E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 SMART SM00930 258 333 1.4E-23 T 01-11-2018 IPR018449 NIL domain DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 Gene3D G3DSA:3.40.50.300 1 232 2.1E-76 T 01-11-2018 DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 Pfam PF09383 NIL domain 261 331 1.6E-16 T 01-11-2018 IPR018449 NIL domain DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 SUPERFAMILY SSF52540 1 240 9.66E-85 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 Gene3D G3DSA:3.30.70.260 233 334 1.3E-24 T 01-11-2018 DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 SUPERFAMILY SSF55021 249 334 2.63E-19 T 01-11-2018 DOE78_21355 594b6b13d5866c4c95bf4fdb01dffb32 337 Pfam PF00005 ABC transporter 22 169 6.9E-37 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 Gene3D G3DSA:1.10.260.40 2 60 5.3E-23 T 01-11-2018 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 Gene3D G3DSA:3.40.50.2300 155 284 8.5E-61 T 01-11-2018 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 SMART SM00354 1 71 2.0E-31 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 Gene3D G3DSA:3.40.50.2300 62 305 8.5E-61 T 01-11-2018 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 SUPERFAMILY SSF53822 58 311 1.36E-56 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_09090 65c7f650154655a387cde124e5d7e652 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-20 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 SUPERFAMILY SSF47413 2 59 1.65E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_09090 65c7f650154655a387cde124e5d7e652 324 Pfam PF13377 Periplasmic binding protein-like domain 163 324 5.4E-22 T 01-11-2018 DOE78_05690 fa86a84a13715568338ad319e941af69 434 Gene3D G3DSA:2.30.42.10 332 433 5.7E-24 T 01-11-2018 DOE78_05690 fa86a84a13715568338ad319e941af69 434 Pfam PF13180 PDZ domain 332 427 3.4E-19 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_05690 fa86a84a13715568338ad319e941af69 434 Gene3D G3DSA:2.40.10.10 215 331 1.8E-41 T 01-11-2018 DOE78_05690 fa86a84a13715568338ad319e941af69 434 Pfam PF13365 Trypsin-like peptidase domain 150 294 1.9E-29 T 01-11-2018 DOE78_05690 fa86a84a13715568338ad319e941af69 434 Gene3D G3DSA:2.40.10.10 77 212 1.9E-27 T 01-11-2018 DOE78_05690 fa86a84a13715568338ad319e941af69 434 SMART SM00228 332 418 9.6E-12 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_05690 fa86a84a13715568338ad319e941af69 434 PRINTS PR00834 HtrA/DegQ protease family signature 162 174 9.0E-40 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_05690 fa86a84a13715568338ad319e941af69 434 PRINTS PR00834 HtrA/DegQ protease family signature 183 203 9.0E-40 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_05690 fa86a84a13715568338ad319e941af69 434 PRINTS PR00834 HtrA/DegQ protease family signature 265 282 9.0E-40 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_05690 fa86a84a13715568338ad319e941af69 434 PRINTS PR00834 HtrA/DegQ protease family signature 287 304 9.0E-40 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_05690 fa86a84a13715568338ad319e941af69 434 PRINTS PR00834 HtrA/DegQ protease family signature 375 387 9.0E-40 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_05690 fa86a84a13715568338ad319e941af69 434 PRINTS PR00834 HtrA/DegQ protease family signature 224 248 9.0E-40 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_05690 fa86a84a13715568338ad319e941af69 434 SUPERFAMILY SSF50156 317 427 8.02E-20 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_05690 fa86a84a13715568338ad319e941af69 434 SUPERFAMILY SSF50494 114 328 2.06E-55 T 01-11-2018 IPR009003 Peptidase S1, PA clan DOE78_09425 4052f6e677d8b1ec7db5a2fd3522d11e 254 Gene3D G3DSA:3.50.30.50 2 252 8.4E-51 T 01-11-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DOE78_09425 4052f6e677d8b1ec7db5a2fd3522d11e 254 SUPERFAMILY SSF102198 1 250 1.12E-49 T 01-11-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DOE78_09425 4052f6e677d8b1ec7db5a2fd3522d11e 254 Pfam PF04199 Putative cyclase 5 179 6.7E-35 T 01-11-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DOE78_06325 d6db9c3edeb91c4352cfab32b61e9b8e 181 SUPERFAMILY SSF47413 3 71 7.6E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_06325 d6db9c3edeb91c4352cfab32b61e9b8e 181 SUPERFAMILY SSF51182 57 180 3.75E-25 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_06325 d6db9c3edeb91c4352cfab32b61e9b8e 181 Pfam PF07883 Cupin domain 106 174 2.5E-14 T 01-11-2018 IPR013096 Cupin 2, conserved barrel DOE78_06325 d6db9c3edeb91c4352cfab32b61e9b8e 181 SMART SM00530 9 64 1.7E-12 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_06325 d6db9c3edeb91c4352cfab32b61e9b8e 181 Gene3D G3DSA:2.60.120.10 71 176 3.7E-19 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_06325 d6db9c3edeb91c4352cfab32b61e9b8e 181 Pfam PF01381 Helix-turn-helix 11 61 4.1E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_06325 d6db9c3edeb91c4352cfab32b61e9b8e 181 Gene3D G3DSA:1.10.260.40 3 70 1.1E-17 T 01-11-2018 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Pfam PF04563 RNA polymerase beta subunit 28 453 1.7E-30 T 01-11-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Pfam PF04560 RNA polymerase Rpb2, domain 7 1070 1144 8.0E-27 T 01-11-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:3.90.1800.10 1056 1109 1.1E-10 T 01-11-2018 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:3.90.1100.10 603 670 1.8E-18 T 01-11-2018 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 ProSitePatterns PS01166 RNA polymerases beta chain signature. 921 933 - T 01-11-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:3.90.1110.10 154 262 3.0E-8 T 01-11-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:2.40.270.10 980 1046 8.6E-24 T 01-11-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 895 0.0 T 01-11-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:2.40.50.100 671 750 2.1E-27 T 01-11-2018 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Pfam PF10385 RNA polymerase beta subunit external 1 domain 546 613 2.4E-25 T 01-11-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Pfam PF04565 RNA polymerase Rpb2, domain 3 468 536 1.3E-30 T 01-11-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:3.90.1100.10 384 583 3.0E-75 T 01-11-2018 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:2.40.50.150 790 929 3.5E-60 T 01-11-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Pfam PF00562 RNA polymerase Rpb2, domain 6 675 1068 4.0E-164 T 01-11-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:3.90.1100.10 20 153 2.6E-53 T 01-11-2018 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 SUPERFAMILY SSF64484 13 1156 0.0 T 01-11-2018 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Gene3D G3DSA:2.40.270.10 751 789 5.9E-7 T 01-11-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1146 12.601 T 01-11-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 288 4.3E-27 T 01-11-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00665 f4311eecc452a044f287a1cf99c68f9d 1186 Pfam PF04561 RNA polymerase Rpb2, domain 2 373 409 4.0E-5 T 01-11-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_15030 719e7cb3e1a0171c6cd1fd82a94db8c9 185 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 62 179 4.6E-41 T 01-11-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal DOE78_15030 719e7cb3e1a0171c6cd1fd82a94db8c9 185 Gene3D G3DSA:3.40.1700.10 53 185 8.6E-52 T 01-11-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DOE78_15030 719e7cb3e1a0171c6cd1fd82a94db8c9 185 Gene3D G3DSA:1.10.287.770 1 52 6.8E-12 T 01-11-2018 DOE78_15030 719e7cb3e1a0171c6cd1fd82a94db8c9 185 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 1 53 1.1E-14 T 01-11-2018 IPR019457 Uncharacterised domain YojJ, N-terminal DOE78_15030 719e7cb3e1a0171c6cd1fd82a94db8c9 185 SUPERFAMILY SSF143597 32 183 6.93E-50 T 01-11-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DOE78_15030 719e7cb3e1a0171c6cd1fd82a94db8c9 185 PIRSF PIRSF004793 10 185 3.1E-58 T 01-11-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 Gene3D G3DSA:1.10.580.10 25 351 1.2E-127 T 01-11-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 PRINTS PR00143 Citrate synthase signature 304 320 6.2E-43 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 PRINTS PR00143 Citrate synthase signature 123 136 6.2E-43 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 PRINTS PR00143 Citrate synthase signature 194 222 6.2E-43 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 PRINTS PR00143 Citrate synthase signature 247 267 6.2E-43 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 PRINTS PR00143 Citrate synthase signature 324 338 6.2E-43 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 PRINTS PR00143 Citrate synthase signature 172 187 6.2E-43 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 3.5E-163 T 01-11-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 01-11-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 SUPERFAMILY SSF48256 2 371 1.31E-135 T 01-11-2018 IPR036969 Citrate synthase superfamily GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 5.4E-131 T 01-11-2018 IPR002020 Citrate synthase GO:0046912 DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 PIRSF PIRSF001369 1 372 8.8E-157 T 01-11-2018 IPR024176 Citrate synthase, bacterial-type DOE78_18455 d0ff1296a2d4f5eb7a5692cca583ace7 372 Gene3D G3DSA:1.10.230.10 220 318 1.2E-127 T 01-11-2018 IPR016143 Citrate synthase-like, small alpha subdomain DOE78_03265 0b42dfca5ec1dbfc5b016da0fe250349 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.4E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_03265 0b42dfca5ec1dbfc5b016da0fe250349 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.4E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_03265 0b42dfca5ec1dbfc5b016da0fe250349 190 Gene3D G3DSA:1.10.357.10 2 188 9.1E-30 T 01-11-2018 DOE78_03265 0b42dfca5ec1dbfc5b016da0fe250349 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 7.0E-14 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_03265 0b42dfca5ec1dbfc5b016da0fe250349 190 SUPERFAMILY SSF46689 4 81 5.99E-18 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 6.0E-142 T 01-11-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 SUPERFAMILY SSF54826 3 138 1.28E-61 T 01-11-2018 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 PRINTS PR00148 Enolase signature 314 325 6.2E-47 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 PRINTS PR00148 Enolase signature 366 383 6.2E-47 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 PRINTS PR00148 Enolase signature 107 123 6.2E-47 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 PRINTS PR00148 Enolase signature 337 351 6.2E-47 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 PRINTS PR00148 Enolase signature 37 51 6.2E-47 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 PRINTS PR00148 Enolase signature 161 174 6.2E-47 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 SMART SM01192 139 428 8.7E-226 T 01-11-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 Gene3D G3DSA:3.30.390.10 1 127 5.3E-60 T 01-11-2018 IPR029017 Enolase-like, N-terminal DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 Gene3D G3DSA:3.20.20.120 128 431 1.5E-139 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 01-11-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 Pfam PF03952 Enolase, N-terminal domain 4 134 4.9E-64 T 01-11-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 SMART SM01193 4 134 1.3E-103 T 01-11-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 PIRSF PIRSF001400 1 428 1.9E-198 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 Hamap MF_00318 Enolase [eno]. 2 414 46.255 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 1.9E-219 T 01-11-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22070 eb31b3c8f7930d3595f77c039a1e4bb3 431 SUPERFAMILY SSF51604 138 428 1.98E-133 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily DOE78_13205 bf3fa9d57e4bd073e7e303bd186bef2b 379 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 240 8.2E-50 T 01-11-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 DOE78_13205 bf3fa9d57e4bd073e7e303bd186bef2b 379 SUPERFAMILY SSF56300 1 317 1.74E-52 T 01-11-2018 DOE78_13205 bf3fa9d57e4bd073e7e303bd186bef2b 379 Gene3D G3DSA:3.60.21.10 1 259 1.4E-76 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_13205 bf3fa9d57e4bd073e7e303bd186bef2b 379 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 262 355 2.1E-13 T 01-11-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain DOE78_13205 bf3fa9d57e4bd073e7e303bd186bef2b 379 Pfam PF00149 Calcineurin-like phosphoesterase 1 182 1.4E-18 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.3E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 SUPERFAMILY SSF51735 5 251 1.43E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.2E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.2E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.2E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.2E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.2E-22 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 Gene3D G3DSA:3.40.50.720 3 281 3.6E-76 T 01-11-2018 DOE78_06340 4b6f171484ffb0d211db3625c3855eb2 281 Pfam PF00106 short chain dehydrogenase 6 189 2.4E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 SUPERFAMILY SSF46894 125 225 8.0E-28 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 SUPERFAMILY SSF52172 1 124 2.42E-41 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 Pfam PF00072 Response regulator receiver domain 4 112 8.3E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 Gene3D G3DSA:3.40.50.2300 1 127 3.6E-38 T 01-11-2018 DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 7.8E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 Gene3D G3DSA:1.10.10.10 128 227 3.8E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 SMART SM00862 149 225 1.3E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_10800 2387987bd4a3f10e3aac08b1e8217e05 227 SMART SM00448 2 112 3.3E-43 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SUPERFAMILY SSF47384 262 329 2.55E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Gene3D G3DSA:1.10.287.130 254 327 3.3E-16 T 01-11-2018 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SUPERFAMILY SSF55785 124 249 6.98E-18 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Pfam PF13426 PAS domain 25 126 4.1E-9 T 01-11-2018 IPR000014 PAS domain DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Pfam PF13426 PAS domain 150 250 1.0E-9 T 01-11-2018 IPR000014 PAS domain DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SUPERFAMILY SSF55874 318 476 2.1E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 456 8.6E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 8.6E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 8.6E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 8.6E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SMART SM00091 139 205 0.24 T 01-11-2018 IPR000014 PAS domain DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SMART SM00091 14 80 1.6E-4 T 01-11-2018 IPR000014 PAS domain DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Gene3D G3DSA:3.30.450.20 131 253 1.0E-19 T 01-11-2018 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SMART SM00086 209 251 8.6 T 01-11-2018 IPR001610 PAC motif DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SMART SM00086 87 127 5.2E-5 T 01-11-2018 IPR001610 PAC motif DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SUPERFAMILY SSF55785 21 130 2.62E-19 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Gene3D G3DSA:3.30.565.10 328 479 2.1E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SMART SM00388 266 328 3.8E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 475 1.7E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 326 1.8E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 Gene3D G3DSA:3.30.450.20 17 130 5.2E-19 T 01-11-2018 DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 SMART SM00387 370 478 1.6E-28 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 132 1.0E-19 T 01-11-2018 IPR000014 PAS domain DOE78_02955 267f2ab1c0574ec32f6cb12dd23e84cf 481 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 256 6.4E-19 T 01-11-2018 IPR000014 PAS domain DOE78_07570 a31cf924141bccbfdfc279c6f672a9cb 91 PIRSF PIRSF031653 1 91 6.1E-36 T 01-11-2018 IPR016979 Protein of unknown function DUF2129 DOE78_07570 a31cf924141bccbfdfc279c6f672a9cb 91 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 5.8E-32 T 01-11-2018 IPR016979 Protein of unknown function DUF2129 DOE78_07570 a31cf924141bccbfdfc279c6f672a9cb 91 Hamap MF_01126 UPF0298 protein . 1 78 22.686 T 01-11-2018 IPR016979 Protein of unknown function DUF2129 DOE78_02735 1a7417b081603b2090249795e59c4b66 346 Gene3D G3DSA:3.40.50.720 159 313 1.5E-139 T 01-11-2018 DOE78_02735 1a7417b081603b2090249795e59c4b66 346 SMART SM00829 11 341 6.2E-8 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_02735 1a7417b081603b2090249795e59c4b66 346 SUPERFAMILY SSF50129 6 170 8.07E-57 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_02735 1a7417b081603b2090249795e59c4b66 346 SUPERFAMILY SSF51735 150 311 3.36E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_02735 1a7417b081603b2090249795e59c4b66 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_02735 1a7417b081603b2090249795e59c4b66 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 143 1.7E-31 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_02735 1a7417b081603b2090249795e59c4b66 346 Gene3D G3DSA:3.90.180.10 14 341 1.5E-139 T 01-11-2018 DOE78_02735 1a7417b081603b2090249795e59c4b66 346 Pfam PF00107 Zinc-binding dehydrogenase 185 307 2.4E-20 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_00220 ed76b1a33277f3795462177884dff738 125 Hamap MF_01159 Initiation-control protein YabA. 1 124 24.256 T 01-11-2018 IPR010377 Initiation control protein YabA GO:0006260 DOE78_00220 ed76b1a33277f3795462177884dff738 125 Pfam PF06156 Initiation control protein YabA 2 120 9.5E-36 T 01-11-2018 IPR010377 Initiation control protein YabA GO:0006260 DOE78_00220 ed76b1a33277f3795462177884dff738 125 PIRSF PIRSF021439 1 125 2.4E-40 T 01-11-2018 IPR010377 Initiation control protein YabA GO:0006260 DOE78_17315 2fdc4a791ca2a079fb88229c82afd612 312 Pfam PF02401 LytB protein 4 284 1.1E-80 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DOE78_17315 2fdc4a791ca2a079fb88229c82afd612 312 Gene3D G3DSA:3.40.1010.20 104 197 3.2E-94 T 01-11-2018 DOE78_17315 2fdc4a791ca2a079fb88229c82afd612 312 Gene3D G3DSA:3.40.1010.20 7 283 3.2E-94 T 01-11-2018 DOE78_17315 2fdc4a791ca2a079fb88229c82afd612 312 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 32.103 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DOE78_17315 2fdc4a791ca2a079fb88229c82afd612 312 Gene3D G3DSA:3.40.50.11270 12 103 3.2E-94 T 01-11-2018 DOE78_17315 2fdc4a791ca2a079fb88229c82afd612 312 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 1.2E-91 T 01-11-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DOE78_05815 2685e5ee7298c3e3ba247ac4ef99b32c 117 Gene3D G3DSA:1.20.1500.10 2 113 3.5E-38 T 01-11-2018 IPR023378 YheA/YmcA-like domain superfamily DOE78_05815 2685e5ee7298c3e3ba247ac4ef99b32c 117 Hamap MF_01526 UPF0342 protein . 2 113 19.103 T 01-11-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DOE78_05815 2685e5ee7298c3e3ba247ac4ef99b32c 117 SUPERFAMILY SSF158622 3 113 8.76E-38 T 01-11-2018 IPR023378 YheA/YmcA-like domain superfamily DOE78_05815 2685e5ee7298c3e3ba247ac4ef99b32c 117 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 6 108 1.3E-24 T 01-11-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DOE78_23050 e53b931c091c8b35b1967aadac701984 383 Gene3D G3DSA:3.90.1150.10 253 383 6.9E-38 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_23050 e53b931c091c8b35b1967aadac701984 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 374 4.7E-139 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE78_23050 e53b931c091c8b35b1967aadac701984 383 Gene3D G3DSA:3.40.640.10 1 252 1.7E-104 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_23050 e53b931c091c8b35b1967aadac701984 383 PIRSF PIRSF000390 1 380 9.5E-121 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE78_23050 e53b931c091c8b35b1967aadac701984 383 SUPERFAMILY SSF53383 3 377 1.79E-127 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 1.3E-117 T 01-11-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 442 1.7E-183 T 01-11-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 SUPERFAMILY SSF48024 8 119 1.83E-37 T 01-11-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 SUPERFAMILY SSF52540 183 433 1.44E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 SMART SM00382 202 391 0.008 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 Gene3D G3DSA:3.40.50.300 167 454 5.4E-118 T 01-11-2018 DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 Gene3D G3DSA:1.10.860.10 1 166 1.2E-63 T 01-11-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOE78_24605 87d3c0dcffc317cca899f8f45889156e 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 2.0E-35 T 01-11-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 01-11-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 Pfam PF00137 ATP synthase subunit C 4 66 8.0E-16 T 01-11-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 SUPERFAMILY SSF81333 3 68 3.53E-20 T 01-11-2018 IPR035921 F/V-ATP synthase subunit C superfamily DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 9.2E-21 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 9.2E-21 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 9.2E-21 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 16.677 T 01-11-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 13 68 1.5E-25 T 01-11-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DOE78_23705 63ff776c7a896e0272690e4afbeebf62 70 Gene3D G3DSA:1.20.20.10 1 69 1.1E-29 T 01-11-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_03590 b9ac8e9491914f903a0575b8d0e2b1c9 277 Gene3D G3DSA:1.10.3720.10 29 271 5.8E-70 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03590 b9ac8e9491914f903a0575b8d0e2b1c9 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 275 1.7E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_03590 b9ac8e9491914f903a0575b8d0e2b1c9 277 SUPERFAMILY SSF161098 33 262 2.88E-61 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_20965 720f9836ed96be91dde4286aa6037773 163 Pfam PF00293 NUDIX domain 11 126 5.6E-19 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_20965 720f9836ed96be91dde4286aa6037773 163 Gene3D G3DSA:3.90.79.10 2 147 1.3E-27 T 01-11-2018 DOE78_20965 720f9836ed96be91dde4286aa6037773 163 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_20965 720f9836ed96be91dde4286aa6037773 163 SUPERFAMILY SSF55811 6 146 5.01E-28 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_20965 720f9836ed96be91dde4286aa6037773 163 PRINTS PR00502 NUDIX hydrolase family signature 52 67 4.4E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_20965 720f9836ed96be91dde4286aa6037773 163 PRINTS PR00502 NUDIX hydrolase family signature 38 52 4.4E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 SUPERFAMILY SSF52172 1 155 2.13E-28 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_11085 502a4694945b09d5189d00b89749bce1 537 SUPERFAMILY SSF46689 436 484 5.38E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 SMART SM00342 450 533 2.2E-34 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 Gene3D G3DSA:3.40.50.2300 2 150 2.3E-28 T 01-11-2018 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 502 517 1.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 517 533 1.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 Pfam PF12833 Helix-turn-helix domain 458 534 1.6E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 Gene3D G3DSA:1.10.10.60 433 482 1.3E-16 T 01-11-2018 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 Pfam PF00072 Response regulator receiver domain 4 117 9.3E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 SMART SM00448 2 117 2.6E-19 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 SUPERFAMILY SSF46689 487 534 1.75E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 487 529 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_11085 502a4694945b09d5189d00b89749bce1 537 Gene3D G3DSA:1.10.10.60 483 536 9.7E-18 T 01-11-2018 DOE78_11715 0db715e69f153b7995a6226537310447 404 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 76 90 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_11715 0db715e69f153b7995a6226537310447 404 Gene3D G3DSA:3.90.180.10 44 388 2.9E-136 T 01-11-2018 DOE78_11715 0db715e69f153b7995a6226537310447 404 Pfam PF00107 Zinc-binding dehydrogenase 206 279 1.4E-11 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_11715 0db715e69f153b7995a6226537310447 404 Gene3D G3DSA:3.40.50.720 187 351 2.9E-136 T 01-11-2018 DOE78_11715 0db715e69f153b7995a6226537310447 404 SUPERFAMILY SSF51735 171 362 8.51E-64 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11715 0db715e69f153b7995a6226537310447 404 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 44 153 4.0E-26 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_11715 0db715e69f153b7995a6226537310447 404 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 3 402 2.8E-233 T 01-11-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 DOE78_11715 0db715e69f153b7995a6226537310447 404 SUPERFAMILY SSF50129 4 200 9.92E-58 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 Pfam PF00664 ABC transporter transmembrane region 21 292 1.8E-43 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 SUPERFAMILY SSF52540 334 574 1.55E-81 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 Pfam PF00005 ABC transporter 354 501 2.5E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 SMART SM00382 363 555 9.1E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 Gene3D G3DSA:3.40.50.300 329 584 4.5E-82 T 01-11-2018 DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 SUPERFAMILY SSF90123 8 325 3.14E-74 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05755 7cc56fb4cf3017826ee10f0cd6a9b6f8 585 Gene3D G3DSA:1.20.1560.10 3 320 3.0E-77 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_10020 50e84d4f607c511475fdfee27dcf3d98 108 SUPERFAMILY SSF46767 2 85 2.22E-21 T 01-11-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DOE78_10020 50e84d4f607c511475fdfee27dcf3d98 108 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 3 84 6.4E-23 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DOE78_10020 50e84d4f607c511475fdfee27dcf3d98 108 Gene3D G3DSA:1.10.10.10 1 106 1.2E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_24215 3d98ebbb5bfd76a67749a4e1ae082ce9 177 SUPERFAMILY SSF46785 7 158 1.05E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_24215 3d98ebbb5bfd76a67749a4e1ae082ce9 177 PIRSF PIRSF006707 1 177 2.3E-54 T 01-11-2018 IPR026282 DNA-binding protein, MJ1563 type DOE78_24215 3d98ebbb5bfd76a67749a4e1ae082ce9 177 Gene3D G3DSA:1.10.10.10 7 91 3.0E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_15470 211bde39efc6cb8fa73354883c49c44c 142 Pfam PF01641 SelR domain 7 125 2.7E-50 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DOE78_15470 211bde39efc6cb8fa73354883c49c44c 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 134 4.2E-64 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DOE78_15470 211bde39efc6cb8fa73354883c49c44c 142 Gene3D G3DSA:2.170.150.20 1 142 1.4E-59 T 01-11-2018 DOE78_15470 211bde39efc6cb8fa73354883c49c44c 142 SUPERFAMILY SSF51316 3 141 1.57E-60 T 01-11-2018 IPR011057 Mss4-like superfamily DOE78_15470 211bde39efc6cb8fa73354883c49c44c 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 126 37.397 T 01-11-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 Gene3D G3DSA:3.50.50.60 115 226 5.3E-81 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 Gene3D G3DSA:3.50.50.60 4 289 5.3E-81 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 5.8E-17 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 5.8E-17 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 259 277 5.8E-17 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 5.8E-17 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 5.8E-17 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 3.4E-38 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 SUPERFAMILY SSF51905 3 296 6.82E-39 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 8.7E-17 T 01-11-2018 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 8.7E-17 T 01-11-2018 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 271 8.7E-17 T 01-11-2018 DOE78_24120 4e674af4046fa95c9a70d4e20d39bfe3 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 8.7E-17 T 01-11-2018 DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.3E-29 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 01-11-2018 IPR019844 Cold-shock conserved site DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 SUPERFAMILY SSF50249 1 64 3.94E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 Gene3D G3DSA:2.40.50.140 1 66 5.3E-30 T 01-11-2018 DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 PIRSF PIRSF002599 1 66 6.3E-24 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 PRINTS PR00050 Cold shock protein signature 4 19 4.2E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 PRINTS PR00050 Cold shock protein signature 39 57 4.2E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 PRINTS PR00050 Cold shock protein signature 24 33 4.2E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_04895 fcf3aa1d73223deb28b1f4544668f14d 66 SMART SM00357 3 66 2.3E-29 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_05460 ff61f6734f2e93c8e0131524f66023dd 205 SUPERFAMILY SSF55811 29 196 2.75E-21 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_05460 ff61f6734f2e93c8e0131524f66023dd 205 Gene3D G3DSA:3.90.79.10 5 202 9.1E-40 T 01-11-2018 DOE78_05460 ff61f6734f2e93c8e0131524f66023dd 205 Pfam PF00293 NUDIX domain 48 135 4.6E-7 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 134 266 6.5E-48 T 01-11-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 305 402 3.8E-30 T 01-11-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 Gene3D G3DSA:2.60.40.10 1 103 7.4E-18 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 SUPERFAMILY SSF48208 405 824 3.15E-42 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 406 754 9.5E-120 T 01-11-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 PIRSF PIRSF010631 1 868 4.9E-273 T 01-11-2018 IPR016007 Alpha-L-rhamnosidase DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 Gene3D G3DSA:1.50.10.10 105 876 3.0E-272 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_20195 1795bb6e1410a253273184d26fcfd956 947 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 757 830 2.2E-15 T 01-11-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain DOE78_16680 694c9258946fc33101b0629c40115507 294 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_16680 694c9258946fc33101b0629c40115507 294 Gene3D G3DSA:3.40.50.300 1 236 1.1E-57 T 01-11-2018 DOE78_16680 694c9258946fc33101b0629c40115507 294 SUPERFAMILY SSF52540 4 233 3.76E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16680 694c9258946fc33101b0629c40115507 294 SMART SM00382 28 214 1.1E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_16680 694c9258946fc33101b0629c40115507 294 Pfam PF00005 ABC transporter 20 158 1.2E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_13005 f7ce58e7d0381fa42c9a17032f525650 371 SUPERFAMILY SSF102114 34 360 1.57E-50 T 01-11-2018 DOE78_13005 f7ce58e7d0381fa42c9a17032f525650 371 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 1.5E-24 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DOE78_13005 f7ce58e7d0381fa42c9a17032f525650 371 Pfam PF04055 Radical SAM superfamily 81 221 2.4E-12 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_13005 f7ce58e7d0381fa42c9a17032f525650 371 SMART SM00876 256 359 9.3E-34 T 01-11-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DOE78_13005 f7ce58e7d0381fa42c9a17032f525650 371 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 365 5.8E-145 T 01-11-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 DOE78_13005 f7ce58e7d0381fa42c9a17032f525650 371 Gene3D G3DSA:3.20.20.70 15 365 1.3E-105 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_01515 bc2758ff56d1f5ab9b2819eddcd82981 70 Pfam PF14146 Domain of unknown function (DUF4305) 18 55 4.1E-14 T 01-11-2018 IPR025426 Protein of unknown function DUF4305 DOE78_01515 bc2758ff56d1f5ab9b2819eddcd82981 70 ProDom PD053380 YDIK LIPOPROTEIN TRANSMEMBRANE MEMBRANE PRECURSOR PALMITATE SIGNAL 3 57 0.003 T 01-11-2018 DOE78_24715 9cf6c59560e535749725e21054aaa553 206 SMART SM01245 5 57 1.1E-21 T 01-11-2018 IPR032782 Jag, N-terminal DOE78_24715 9cf6c59560e535749725e21054aaa553 206 Gene3D G3DSA:3.30.1370.50 141 206 1.5E-26 T 01-11-2018 IPR036867 R3H domain superfamily GO:0003676 DOE78_24715 9cf6c59560e535749725e21054aaa553 206 Pfam PF01424 R3H domain 145 204 2.6E-16 T 01-11-2018 IPR001374 R3H domain GO:0003676 DOE78_24715 9cf6c59560e535749725e21054aaa553 206 SMART SM00393 126 205 3.6E-20 T 01-11-2018 IPR001374 R3H domain GO:0003676 DOE78_24715 9cf6c59560e535749725e21054aaa553 206 Pfam PF13083 KH domain 66 128 1.9E-14 T 01-11-2018 DOE78_24715 9cf6c59560e535749725e21054aaa553 206 Gene3D G3DSA:3.30.30.80 1 57 4.1E-19 T 01-11-2018 IPR038247 Jag, N-terminal domain superfamily DOE78_24715 9cf6c59560e535749725e21054aaa553 206 Pfam PF14804 Jag N-terminus 7 55 1.9E-19 T 01-11-2018 IPR032782 Jag, N-terminal DOE78_24715 9cf6c59560e535749725e21054aaa553 206 Gene3D G3DSA:3.30.300.20 59 140 1.1E-24 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_24715 9cf6c59560e535749725e21054aaa553 206 SUPERFAMILY SSF82708 148 204 1.82E-9 T 01-11-2018 IPR036867 R3H domain superfamily GO:0003676 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 ProSitePatterns PS00447 DNA polymerase family A signature. 703 722 - T 01-11-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Gene3D G3DSA:3.30.420.10 298 490 1.1E-62 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SUPERFAMILY SSF56672 471 877 1.22E-159 T 01-11-2018 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 266 1.3E-35 T 01-11-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SMART SM00474 300 467 1.3E-18 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Gene3D G3DSA:1.10.150.20 174 247 2.7E-101 T 01-11-2018 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Gene3D G3DSA:1.10.150.20 658 801 4.0E-110 T 01-11-2018 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Gene3D G3DSA:3.30.70.370 612 873 4.0E-110 T 01-11-2018 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SMART SM00279 173 208 1.2E-17 T 01-11-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SUPERFAMILY SSF53098 301 468 4.1E-42 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 641 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 810 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 672 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 625 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 692 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 728 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 751 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 837 1.0E-81 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 170 1.1E-54 T 01-11-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Gene3D G3DSA:1.20.1060.10 492 606 1.0E-44 T 01-11-2018 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SUPERFAMILY SSF88723 2 170 2.94E-56 T 01-11-2018 IPR029060 PIN-like domain superfamily DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 TIGRFAM TIGR00593 pola: DNA polymerase I 5 877 0.0 T 01-11-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Pfam PF00476 DNA polymerase family A 500 874 2.8E-163 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 Gene3D G3DSA:3.40.50.1010 5 278 2.7E-101 T 01-11-2018 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SMART SM00475 3 262 4.4E-150 T 01-11-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SMART SM00482 634 841 8.6E-123 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18415 c55919105cae9f680bb9a30d3a882593 877 SUPERFAMILY SSF47807 171 285 1.79E-34 T 01-11-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Pfam PF00271 Helicase conserved C-terminal domain 829 929 1.0E-17 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Gene3D G3DSA:2.30.30.840 503 561 5.8E-245 T 01-11-2018 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Pfam PF00270 DEAD/DEAH box helicase 625 784 8.4E-17 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SUPERFAMILY SSF52540 543 803 1.67E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SUPERFAMILY SSF52540 377 490 6.91E-26 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SMART SM00487 620 810 3.6E-34 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SUPERFAMILY SSF143517 1018 1169 4.71E-35 T 01-11-2018 IPR037235 TRCF-like, C-terminal domain DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SMART SM00982 1025 1125 5.3E-37 T 01-11-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SMART SM01058 499 596 3.6E-50 T 01-11-2018 IPR003711 CarD-like/TRCF domain DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1127 28.854 T 01-11-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Pfam PF02559 CarD-like/TRCF domain 500 595 2.1E-31 T 01-11-2018 IPR003711 CarD-like/TRCF domain DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Gene3D G3DSA:3.40.50.300 562 801 5.8E-245 T 01-11-2018 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Pfam PF03461 TRCF domain 1027 1118 3.7E-27 T 01-11-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SUPERFAMILY SSF52540 802 1010 4.98E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Gene3D G3DSA:3.90.1150.50 1021 1176 1.7E-42 T 01-11-2018 IPR037235 TRCF-like, C-terminal domain DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Gene3D G3DSA:3.40.50.300 498 1009 5.8E-245 T 01-11-2018 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SMART SM00490 846 930 4.0E-21 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SUPERFAMILY SSF141259 490 568 2.48E-26 T 01-11-2018 IPR036101 CarD-like/TRCF domain superfamily DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Gene3D G3DSA:3.30.2060.10 140 225 1.8E-62 T 01-11-2018 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 Gene3D G3DSA:3.40.50.11180 35 325 1.8E-62 T 01-11-2018 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1099 0.0 T 01-11-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DOE78_00330 94ed6e76e75ca7c6fa933f4f1979eef1 1179 SUPERFAMILY SSF52540 15 351 2.5E-87 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07405 d5d6b9a9973472472eff4cc77a81df81 154 SUPERFAMILY SSF55729 9 153 4.53E-10 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_07405 d5d6b9a9973472472eff4cc77a81df81 154 Gene3D G3DSA:3.40.630.30 12 153 3.2E-8 T 01-11-2018 DOE78_07405 d5d6b9a9973472472eff4cc77a81df81 154 Pfam PF00583 Acetyltransferase (GNAT) family 62 114 9.4E-5 T 01-11-2018 IPR000182 GNAT domain DOE78_13100 50ff92512e6e6899a858074cec05aa77 232 SMART SM00862 153 228 1.1E-27 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_13100 50ff92512e6e6899a858074cec05aa77 232 SUPERFAMILY SSF52172 1 182 7.85E-41 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_13100 50ff92512e6e6899a858074cec05aa77 232 Gene3D G3DSA:1.10.10.10 128 232 3.0E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13100 50ff92512e6e6899a858074cec05aa77 232 Pfam PF00072 Response regulator receiver domain 6 116 2.2E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_13100 50ff92512e6e6899a858074cec05aa77 232 SMART SM00448 4 115 2.3E-44 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_13100 50ff92512e6e6899a858074cec05aa77 232 Gene3D G3DSA:3.40.50.2300 1 123 1.0E-37 T 01-11-2018 DOE78_13100 50ff92512e6e6899a858074cec05aa77 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 4.8E-28 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 Gene3D G3DSA:3.20.20.70 1 380 4.9E-124 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 Gene3D G3DSA:3.40.50.720 384 649 1.9E-51 T 01-11-2018 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 617 1.7E-27 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 SUPERFAMILY SSF51905 358 620 6.47E-33 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 336 9.5E-75 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 384 406 1.1E-9 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 514 538 1.1E-9 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 571 587 1.1E-9 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 SUPERFAMILY SSF51395 3 352 1.41E-104 T 01-11-2018 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 Gene3D G3DSA:3.50.50.60 480 609 1.9E-51 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 404 9.9E-14 T 01-11-2018 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 518 536 9.9E-14 T 01-11-2018 DOE78_02450 579394a5a7ef1bc42da0b945d7ecf504 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 9.9E-14 T 01-11-2018 DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 22 441 6.3E-195 T 01-11-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 Pfam PF00202 Aminotransferase class-III 34 438 1.8E-128 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 SUPERFAMILY SSF53383 36 441 1.27E-130 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 PIRSF PIRSF000521 1 142 4.9E-11 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 PIRSF PIRSF000521 138 443 4.5E-41 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 Gene3D G3DSA:3.40.640.10 71 337 1.6E-163 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_21615 4d98cd8052ed4610cba8f36bd8cf3399 449 Gene3D G3DSA:3.90.1150.10 15 438 1.6E-163 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 SMART SM00382 368 554 3.1E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 SUPERFAMILY SSF52540 331 579 1.1E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 SUPERFAMILY SSF90123 6 325 6.28E-78 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 Pfam PF00664 ABC transporter transmembrane region 21 294 4.2E-44 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 Pfam PF00005 ABC transporter 359 508 1.6E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 Gene3D G3DSA:1.20.1560.10 4 325 2.6E-109 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05180 fb3744561c18b947b98b0f28a81e0cca 582 Gene3D G3DSA:3.40.50.300 332 582 7.9E-92 T 01-11-2018 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 SMART SM00842 7 204 1.5E-40 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 Gene3D G3DSA:3.30.420.40 205 351 3.6E-33 T 01-11-2018 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 SUPERFAMILY SSF53067 8 200 9.93E-22 T 01-11-2018 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 Gene3D G3DSA:3.30.1490.110 82 177 3.6E-33 T 01-11-2018 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 Pfam PF14450 Cell division protein FtsA 215 378 5.6E-9 T 01-11-2018 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 Gene3D G3DSA:3.30.420.40 10 359 3.6E-33 T 01-11-2018 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 Gene3D G3DSA:3.90.640.10 243 300 3.6E-33 T 01-11-2018 DOE78_19210 71ab34a8f51af2d1df22976b23349f53 723 SUPERFAMILY SSF53067 211 383 5.79E-29 T 01-11-2018 DOE78_08740 d657d1fbb3f5400a9d4c00e22ff6724f 141 Pfam PF11084 Protein of unknown function (DUF2621) 4 141 1.8E-69 T 01-11-2018 IPR020203 Uncharacterised protein family, YneK DOE78_08740 d657d1fbb3f5400a9d4c00e22ff6724f 141 ProDom PD086666 YNEK BH2332 11 141 3.0E-49 T 01-11-2018 IPR020203 Uncharacterised protein family, YneK DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 Gene3D G3DSA:3.40.50.300 1 215 2.4E-84 T 01-11-2018 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 3.9E-17 T 01-11-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 SUPERFAMILY SSF52540 4 214 2.34E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 53.608 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 Pfam PF00406 Adenylate kinase 5 190 2.2E-61 T 01-11-2018 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 PRINTS PR00094 Adenylate kinase signature 177 191 1.0E-33 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 PRINTS PR00094 Adenylate kinase signature 4 17 1.0E-33 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 PRINTS PR00094 Adenylate kinase signature 160 175 1.0E-33 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 PRINTS PR00094 Adenylate kinase signature 32 46 1.0E-33 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 PRINTS PR00094 Adenylate kinase signature 81 97 1.0E-33 T 01-11-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 01-11-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DOE78_00830 d602d83dfee7bdef21d8bda1256a7f57 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 7.0E-81 T 01-11-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 Gene3D G3DSA:3.30.565.10 303 457 1.1E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 Gene3D G3DSA:1.20.1480.50 143 233 6.4E-15 T 01-11-2018 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 SMART SM00304 180 232 1.6E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 SMART SM00387 344 456 1.8E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 SUPERFAMILY SSF158472 181 227 1.83E-8 T 01-11-2018 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 SMART SM00388 233 299 3.9E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 SUPERFAMILY SSF47384 218 299 1.24E-19 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 SUPERFAMILY SSF55874 289 452 1.28E-45 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 1.2E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 450 1.6E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 Pfam PF00672 HAMP domain 181 227 2.6E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 298 5.6E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_20355 52e3d5c825b28d9cf823b0f653672c03 466 Gene3D G3DSA:1.10.287.130 234 300 7.3E-22 T 01-11-2018 DOE78_02785 25eed549c49bcfdb1d6ff221d72a4472 253 Pfam PF00005 ABC transporter 23 171 1.3E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_02785 25eed549c49bcfdb1d6ff221d72a4472 253 SMART SM00382 32 219 2.0E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_02785 25eed549c49bcfdb1d6ff221d72a4472 253 SUPERFAMILY SSF52540 3 225 9.69E-68 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02785 25eed549c49bcfdb1d6ff221d72a4472 253 Gene3D G3DSA:3.40.50.300 1 246 1.4E-65 T 01-11-2018 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 Gene3D G3DSA:1.10.10.60 170 218 1.9E-15 T 01-11-2018 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 SMART SM00342 186 269 4.6E-27 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 SUPERFAMILY SSF46689 222 275 1.08E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 SUPERFAMILY SSF46689 169 219 1.43E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 Pfam PF02311 AraC-like ligand binding domain 27 144 1.9E-12 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 Gene3D G3DSA:1.10.10.60 219 276 1.6E-17 T 01-11-2018 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 SUPERFAMILY SSF51215 26 151 1.83E-14 T 01-11-2018 IPR037923 Transcription regulator HTH-like DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 8.3E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 8.3E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 Pfam PF12833 Helix-turn-helix domain 194 270 3.4E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_20065 6775badeb7121488d3cfed900d0bf7df 305 Gene3D G3DSA:2.60.120.10 18 90 5.8E-12 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_12010 fa8d8c858c9860a79ddac6e2f525051f 314 Gene3D G3DSA:1.10.3720.10 86 303 4.7E-29 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12010 fa8d8c858c9860a79ddac6e2f525051f 314 SUPERFAMILY SSF161098 93 292 1.7E-23 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12010 fa8d8c858c9860a79ddac6e2f525051f 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 1.7E-48 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_24640 8fd0b50d385645017055834e0e14867b 383 Gene3D G3DSA:3.40.50.2000 1 194 1.8E-30 T 01-11-2018 DOE78_24640 8fd0b50d385645017055834e0e14867b 383 Pfam PF00534 Glycosyl transferases group 1 188 350 4.9E-35 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_24640 8fd0b50d385645017055834e0e14867b 383 Pfam PF13439 Glycosyltransferase Family 4 14 177 2.1E-26 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_24640 8fd0b50d385645017055834e0e14867b 383 SUPERFAMILY SSF53756 2 372 1.06E-78 T 01-11-2018 DOE78_24640 8fd0b50d385645017055834e0e14867b 383 Gene3D G3DSA:3.40.50.2000 195 355 5.5E-38 T 01-11-2018 DOE78_02725 e18553a34941d3c29cde7430ec4f290d 300 Pfam PF06719 AraC-type transcriptional regulator N-terminus 30 180 8.6E-46 T 01-11-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DOE78_02725 e18553a34941d3c29cde7430ec4f290d 300 Gene3D G3DSA:1.10.10.60 192 297 3.5E-30 T 01-11-2018 DOE78_02725 e18553a34941d3c29cde7430ec4f290d 300 SUPERFAMILY SSF46689 245 295 1.68E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02725 e18553a34941d3c29cde7430ec4f290d 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_02725 e18553a34941d3c29cde7430ec4f290d 300 SMART SM00342 209 292 1.3E-25 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02725 e18553a34941d3c29cde7430ec4f290d 300 Pfam PF12833 Helix-turn-helix domain 215 289 8.4E-24 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02725 e18553a34941d3c29cde7430ec4f290d 300 SUPERFAMILY SSF46689 193 243 7.69E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_08405 507cab64a092411c116c8e8d0479191c 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 216 6.4E-82 T 01-11-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_08405 507cab64a092411c116c8e8d0479191c 305 SUPERFAMILY SSF55120 1 237 2.01E-81 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_08405 507cab64a092411c116c8e8d0479191c 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 301 19.265 T 01-11-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_08405 507cab64a092411c116c8e8d0479191c 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 237 5.6E-13 T 01-11-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DOE78_08405 507cab64a092411c116c8e8d0479191c 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 178 6.2E-58 T 01-11-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DOE78_08405 507cab64a092411c116c8e8d0479191c 305 Gene3D G3DSA:3.30.2350.10 1 240 8.2E-91 T 01-11-2018 DOE78_09095 e8704e691748cf4dd9d149dd602b29ec 318 SUPERFAMILY SSF161098 75 302 3.79E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09095 e8704e691748cf4dd9d149dd602b29ec 318 Gene3D G3DSA:1.10.3720.10 71 317 2.5E-62 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09095 e8704e691748cf4dd9d149dd602b29ec 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 312 1.9E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 SUPERFAMILY SSF51735 1 221 6.49E-72 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.2E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.2E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.2E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PIRSF PIRSF000126 2 238 3.9E-61 T 01-11-2018 DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 Gene3D G3DSA:3.40.50.720 1 234 1.3E-72 T 01-11-2018 DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 192 0.0073 T 01-11-2018 DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 Pfam PF00106 short chain dehydrogenase 7 195 4.3E-63 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.8E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03625 e3083d33c943367ed0f723fd7468686a 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06875 7b337f8849344888397db3f7190a4021 236 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 14 234 2.0E-55 T 01-11-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 DOE78_04800 2d6bcc0f04250871ce48a1702d06f3ac 702 Gene3D G3DSA:1.20.1640.10 508 702 7.1E-7 T 01-11-2018 DOE78_04800 2d6bcc0f04250871ce48a1702d06f3ac 702 SUPERFAMILY SSF82866 129 347 3.4E-33 T 01-11-2018 DOE78_04800 2d6bcc0f04250871ce48a1702d06f3ac 702 Gene3D G3DSA:1.20.1640.10 180 346 5.7E-9 T 01-11-2018 DOE78_04800 2d6bcc0f04250871ce48a1702d06f3ac 702 Pfam PF03176 MMPL family 406 691 1.1E-44 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DOE78_04800 2d6bcc0f04250871ce48a1702d06f3ac 702 Pfam PF03176 MMPL family 50 375 4.1E-62 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DOE78_04800 2d6bcc0f04250871ce48a1702d06f3ac 702 SUPERFAMILY SSF82866 511 693 1.96E-26 T 01-11-2018 DOE78_20015 a2a2173ff0fe793c359e641bf72eb0ad 339 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 247 339 2.1E-46 T 01-11-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 DOE78_20015 a2a2173ff0fe793c359e641bf72eb0ad 339 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 7 192 5.9E-70 T 01-11-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 SUPERFAMILY SSF54570 3 84 6.28E-35 T 01-11-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 01-11-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 Gene3D G3DSA:3.30.860.10 1 92 1.8E-40 T 01-11-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.2E-25 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.2E-25 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.2E-25 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 PIRSF PIRSF002144 1 92 7.5E-33 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.297 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 7.4E-48 T 01-11-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DOE78_00745 6a775ca9cf3f1b2403076edae4d32713 92 Pfam PF00203 Ribosomal protein S19 3 83 6.6E-36 T 01-11-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_24725 87da580dddfb4f29c943329295c2391b 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 01-11-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 DOE78_24725 87da580dddfb4f29c943329295c2391b 119 Gene3D G3DSA:3.30.230.10 1 116 7.4E-36 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_24725 87da580dddfb4f29c943329295c2391b 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 111 19.254 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DOE78_24725 87da580dddfb4f29c943329295c2391b 119 Pfam PF00825 Ribonuclease P 1 106 8.3E-32 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DOE78_24725 87da580dddfb4f29c943329295c2391b 119 SUPERFAMILY SSF54211 1 113 1.29E-31 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_24725 87da580dddfb4f29c943329295c2391b 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 107 5.0E-31 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DOE78_24725 87da580dddfb4f29c943329295c2391b 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 108 3.9E-28 T 01-11-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DOE78_24530 e5759f5459bef3797251c7af685fc981 216 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 101 202 1.3E-12 T 01-11-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger DOE78_24530 e5759f5459bef3797251c7af685fc981 216 Pfam PF07299 Elongation factor G-binding protein, N-terminal 5 86 1.6E-15 T 01-11-2018 IPR010841 Elongation factor G-binding protein, N-terminal DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 130 1.3E-37 T 01-11-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 Gene3D G3DSA:2.60.15.10 1 88 1.5E-32 T 01-11-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 SUPERFAMILY SSF51344 2 83 3.01E-24 T 01-11-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 Gene3D G3DSA:1.20.5.440 89 133 9.6E-16 T 01-11-2018 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 8.0E-31 T 01-11-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 23.736 T 01-11-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 5.1E-29 T 01-11-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 SUPERFAMILY SSF46604 87 132 1.28E-6 T 01-11-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23675 ebb6ab951e4f08a1e78cab7c571e003a 134 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 131 1.1E-15 T 01-11-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DOE78_04170 9b72d330fe672d752550596996aaf845 390 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 380 3.6E-36 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 SUPERFAMILY SSF82714 183 257 1.18E-8 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:3.30.70.1430 538 635 4.1E-231 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:3.30.70.1320 133 318 4.1E-231 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:3.30.70.1430 41 773 4.1E-231 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Pfam PF00873 AcrB/AcrD/AcrF family 7 989 6.5E-185 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 PRINTS PR00702 Acriflavin resistance protein family signature 377 401 2.1E-37 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 PRINTS PR00702 Acriflavin resistance protein family signature 430 453 2.1E-37 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 PRINTS PR00702 Acriflavin resistance protein family signature 349 370 2.1E-37 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.1E-37 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 PRINTS PR00702 Acriflavin resistance protein family signature 322 345 2.1E-37 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 2.1E-37 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.1E-37 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 SUPERFAMILY SSF82693 43 132 4.45E-15 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:1.20.1640.10 11 494 4.1E-231 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:3.30.2090.10 177 262 4.1E-231 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:1.20.1640.10 495 985 4.1E-231 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 SUPERFAMILY SSF82866 285 480 1.44E-37 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 SUPERFAMILY SSF82693 149 305 5.23E-6 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 SUPERFAMILY SSF82866 767 992 5.36E-42 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:3.30.70.1440 636 828 4.1E-231 T 01-11-2018 DOE78_04805 7a6fa4f2d9ce83c054270c0fb867d4ec 1008 Gene3D G3DSA:3.30.2090.10 684 765 4.1E-231 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.3E-77 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 SUPERFAMILY SSF53784 1 314 8.5E-110 T 01-11-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 Gene3D G3DSA:3.40.50.450 3 285 1.0E-107 T 01-11-2018 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 43.089 T 01-11-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 Gene3D G3DSA:3.40.50.460 142 251 1.0E-107 T 01-11-2018 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 PIRSF PIRSF000532 1 318 4.0E-114 T 01-11-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 1.0E-117 T 01-11-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DOE78_19875 eab34de1bc1c72a02b64302fbc6985d7 319 Pfam PF00365 Phosphofructokinase 3 275 1.9E-105 T 01-11-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_14400 e206a6d440cde6874d0c883d38b49b69 205 Gene3D G3DSA:1.20.58.220 9 205 1.8E-57 T 01-11-2018 IPR038078 PhoU-like domain superfamily DOE78_14400 e206a6d440cde6874d0c883d38b49b69 205 SUPERFAMILY SSF109755 16 197 8.24E-5 T 01-11-2018 DOE78_14400 e206a6d440cde6874d0c883d38b49b69 205 Pfam PF01865 Protein of unknown function DUF47 7 202 3.5E-23 T 01-11-2018 IPR018445 Putative phosphate transport regulator DOE78_19485 de1a988059e81323329961fe3373df5e 259 Gene3D G3DSA:3.40.50.1820 23 259 1.9E-39 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_19485 de1a988059e81323329961fe3373df5e 259 Pfam PF00326 Prolyl oligopeptidase family 68 258 1.0E-15 T 01-11-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DOE78_19485 de1a988059e81323329961fe3373df5e 259 SUPERFAMILY SSF53474 8 257 1.26E-44 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 Gene3D G3DSA:2.30.40.10 7 419 1.8E-157 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 SUPERFAMILY SSF51338 1 425 2.96E-31 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 45.404 T 01-11-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 Gene3D G3DSA:3.20.20.140 54 366 1.8E-157 T 01-11-2018 DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 01-11-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 Pfam PF01979 Amidohydrolase family 51 419 8.3E-54 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 01-11-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 SUPERFAMILY SSF51556 54 368 1.06E-110 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_07845 2f696ddca526405b86b894bbaac57f0d 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 16 422 7.1E-151 T 01-11-2018 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 Gene3D G3DSA:3.40.50.300 158 340 1.6E-62 T 01-11-2018 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 2.0E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 2.0E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.0E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.0E-34 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 Hamap MF_01454 GTPase Obg [obg]. 1 329 48.377 T 01-11-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 SUPERFAMILY SSF102741 358 430 5.89E-24 T 01-11-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 01-11-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 SUPERFAMILY SSF52540 160 333 1.46E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 Gene3D G3DSA:2.70.210.12 1 157 4.6E-61 T 01-11-2018 IPR036726 GTP1/OBG domain superfamily DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 Pfam PF01926 50S ribosome-binding GTPase 160 283 4.3E-23 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 Gene3D G3DSA:2.40.240.60 358 430 8.7E-20 T 01-11-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 Pfam PF09269 Domain of unknown function (DUF1967) 360 428 1.8E-26 T 01-11-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 SUPERFAMILY SSF82051 1 157 4.84E-56 T 01-11-2018 IPR036726 GTP1/OBG domain superfamily DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 319 1.0E-15 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 Pfam PF01018 GTP1/OBG 3 157 6.2E-61 T 01-11-2018 IPR006169 GTP1/OBG domain DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 1.0E-143 T 01-11-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 360 428 4.6E-27 T 01-11-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 DOE78_17915 6fd63dbd83d61e87e676c2a226542738 430 PIRSF PIRSF002401 1 377 8.3E-144 T 01-11-2018 IPR035101 GTP-binding protein, Obg-type DOE78_06375 d60f8017a5612158346dd0a57671c761 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.646 T 01-11-2018 IPR007551 Protein of unknown function DUF520 DOE78_06375 d60f8017a5612158346dd0a57671c761 163 SUPERFAMILY SSF89963 6 90 1.26E-29 T 01-11-2018 IPR036183 YajQ-like superfamily DOE78_06375 d60f8017a5612158346dd0a57671c761 163 Gene3D G3DSA:3.30.70.990 12 101 2.1E-62 T 01-11-2018 IPR035570 UPF0234, N-terminal DOE78_06375 d60f8017a5612158346dd0a57671c761 163 SUPERFAMILY SSF89963 92 163 6.28E-26 T 01-11-2018 IPR036183 YajQ-like superfamily DOE78_06375 d60f8017a5612158346dd0a57671c761 163 Gene3D G3DSA:3.30.70.860 6 163 2.1E-62 T 01-11-2018 IPR035571 UPF0234-like, C-terminal DOE78_06375 d60f8017a5612158346dd0a57671c761 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 1.9E-63 T 01-11-2018 IPR007551 Protein of unknown function DUF520 DOE78_03650 387987c5a129f62f9c0e9ae0b0858fba 329 SUPERFAMILY SSF50129 4 147 2.89E-39 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_03650 387987c5a129f62f9c0e9ae0b0858fba 329 Pfam PF00107 Zinc-binding dehydrogenase 161 274 3.6E-14 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_03650 387987c5a129f62f9c0e9ae0b0858fba 329 SUPERFAMILY SSF51735 119 292 2.13E-35 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_03650 387987c5a129f62f9c0e9ae0b0858fba 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 1.6E-141 T 01-11-2018 IPR014188 Acrylyl-CoA reductase AcuI DOE78_03650 387987c5a129f62f9c0e9ae0b0858fba 329 Gene3D G3DSA:3.90.180.10 19 328 1.5E-118 T 01-11-2018 DOE78_03650 387987c5a129f62f9c0e9ae0b0858fba 329 SMART SM00829 15 327 6.6E-4 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_03650 387987c5a129f62f9c0e9ae0b0858fba 329 Gene3D G3DSA:3.40.50.720 128 296 1.5E-118 T 01-11-2018 DOE78_10580 74f0fafa0c477eddbdebb34f07877ba4 98 Pfam PF12823 Domain of unknown function (DUF3817) 8 94 1.3E-20 T 01-11-2018 IPR023845 Domain of unknown function DUF3817, transmembrane DOE78_10580 74f0fafa0c477eddbdebb34f07877ba4 98 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 9 92 7.6E-26 T 01-11-2018 IPR023845 Domain of unknown function DUF3817, transmembrane DOE78_07095 fdb8b5a7d07fc4b12a76a3993a0efc64 409 Gene3D G3DSA:1.20.1250.20 3 399 4.6E-48 T 01-11-2018 DOE78_07095 fdb8b5a7d07fc4b12a76a3993a0efc64 409 SUPERFAMILY SSF103473 12 398 1.57E-57 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_07095 fdb8b5a7d07fc4b12a76a3993a0efc64 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 108 126 3.0E-7 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DOE78_07095 fdb8b5a7d07fc4b12a76a3993a0efc64 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 61 79 3.0E-7 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DOE78_07095 fdb8b5a7d07fc4b12a76a3993a0efc64 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 269 286 3.0E-7 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DOE78_07095 fdb8b5a7d07fc4b12a76a3993a0efc64 409 PRINTS PR01988 Putative bacilysin exporter bacE signature 306 329 3.0E-7 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DOE78_07095 fdb8b5a7d07fc4b12a76a3993a0efc64 409 Pfam PF07690 Major Facilitator Superfamily 24 260 3.1E-22 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_09880 a55a6ab1e063a33b9df55b42dd3b3cbd 470 SUPERFAMILY SSF53383 76 467 3.15E-74 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_09880 a55a6ab1e063a33b9df55b42dd3b3cbd 470 Gene3D G3DSA:1.10.10.10 2 89 1.1E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09880 a55a6ab1e063a33b9df55b42dd3b3cbd 470 Gene3D G3DSA:3.40.640.10 98 461 7.3E-120 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_09880 a55a6ab1e063a33b9df55b42dd3b3cbd 470 SMART SM00345 20 79 1.3E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_09880 a55a6ab1e063a33b9df55b42dd3b3cbd 470 SUPERFAMILY SSF46785 9 89 4.02E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09880 a55a6ab1e063a33b9df55b42dd3b3cbd 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 2.1E-12 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 610 8.4E-83 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 SUPERFAMILY SSF81665 86 594 1.14E-17 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00941 Cadmium-transporting ATPase signature 64 76 3.9E-15 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00941 Cadmium-transporting ATPase signature 119 139 3.9E-15 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00941 Cadmium-transporting ATPase signature 219 233 3.9E-15 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00941 Cadmium-transporting ATPase signature 139 155 3.9E-15 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 3.9E-15 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 Pfam PF00122 E1-E2 ATPase 134 315 1.7E-51 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 Gene3D G3DSA:2.70.150.20 128 239 6.0E-37 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 548 1.3E-38 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 84 385 1.5E-99 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 636 1.1E-188 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 SUPERFAMILY SSF81653 137 234 1.01E-26 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 Gene3D G3DSA:3.40.1110.10 346 466 1.7E-87 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 1.2E-28 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 569 1.2E-28 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 470 1.2E-28 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 553 1.2E-28 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 1.2E-28 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 481 491 1.2E-28 T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 Gene3D G3DSA:3.40.50.1000 316 585 1.7E-87 T 01-11-2018 IPR023214 HAD superfamily DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 ProSitePatterns PS01229 Hypothetical cof family signature 2. 534 556 - T 01-11-2018 DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 SUPERFAMILY SSF56784 334 634 1.01E-56 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_03465 2441a29ecb96e8ce4fe919bcdd808576 639 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 96 636 4.7E-123 T 01-11-2018 DOE78_02935 d11e31a6888101cef6ac9c9891e34ca5 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 4 199 8.1E-101 T 01-11-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DOE78_02935 d11e31a6888101cef6ac9c9891e34ca5 204 Gene3D G3DSA:3.40.50.300 3 200 1.7E-48 T 01-11-2018 DOE78_02935 d11e31a6888101cef6ac9c9891e34ca5 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 174 5.9E-38 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE78_02935 d11e31a6888101cef6ac9c9891e34ca5 204 SUPERFAMILY SSF52540 3 195 6.22E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02935 d11e31a6888101cef6ac9c9891e34ca5 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 2 200 46.455 T 01-11-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DOE78_02935 d11e31a6888101cef6ac9c9891e34ca5 204 PIRSF PIRSF005624 2 202 2.0E-46 T 01-11-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 DOE78_00700 280bb7dd74ba244e1016d82003000d5f 239 Gene3D G3DSA:3.40.50.620 18 239 6.5E-76 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_00700 280bb7dd74ba244e1016d82003000d5f 239 PIRSF PIRSF000857 9 239 4.6E-89 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DOE78_00700 280bb7dd74ba244e1016d82003000d5f 239 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 43 215 2.0E-54 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DOE78_00700 280bb7dd74ba244e1016d82003000d5f 239 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 49 237 9.2E-78 T 01-11-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 DOE78_00700 280bb7dd74ba244e1016d82003000d5f 239 SUPERFAMILY SSF52402 17 203 1.78E-53 T 01-11-2018 DOE78_00700 280bb7dd74ba244e1016d82003000d5f 239 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 5 239 41.992 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DOE78_00700 280bb7dd74ba244e1016d82003000d5f 239 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 30 239 9.5E-93 T 01-11-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 463 7.5E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 7.5E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 SUPERFAMILY SSF46689 368 462 2.01E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 Gene3D G3DSA:3.30.450.20 1 141 7.4E-12 T 01-11-2018 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 129 6.5E-7 T 01-11-2018 IPR000014 PAS domain DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 368 377 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 180 193 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 SUPERFAMILY SSF52540 160 398 6.89E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 SUPERFAMILY SSF55785 15 112 3.32E-10 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 Gene3D G3DSA:1.10.10.60 393 463 1.1E-17 T 01-11-2018 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 Pfam PF08448 PAS fold 19 118 4.5E-6 T 01-11-2018 IPR013656 PAS fold-4 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 Gene3D G3DSA:3.40.50.300 142 325 5.7E-55 T 01-11-2018 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 Pfam PF02954 Bacterial regulatory protein, Fis family 420 460 1.8E-14 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 Pfam PF00158 Sigma-54 interaction domain 157 320 7.0E-59 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 Gene3D G3DSA:1.10.8.60 326 391 3.1E-20 T 01-11-2018 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_15420 1a702dd87a599e2082986b487bd41c6b 466 SMART SM00382 176 319 1.2E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.8E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 SUPERFAMILY SSF51735 2 245 2.85E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 Gene3D G3DSA:3.40.50.720 1 246 2.5E-43 T 01-11-2018 DOE78_21270 e463b85c1b3d582ec195aaa0736f09b3 249 Pfam PF00106 short chain dehydrogenase 2 196 8.1E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PIRSF PIRSF000126 1 237 2.8E-62 T 01-11-2018 DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.9E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.9E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.9E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 Pfam PF00106 short chain dehydrogenase 7 196 1.4E-63 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 Gene3D G3DSA:3.40.50.720 1 235 7.0E-71 T 01-11-2018 DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 SUPERFAMILY SSF51735 3 220 3.04E-70 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04955 b14fc4c6bf28808111cc4145fc1defe0 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.2E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_12860 b639244b623c699558c36c8078f32fca 119 Pfam PF09585 Conserved hypothetical protein (Lin0512_fam) 5 117 3.5E-44 T 01-11-2018 IPR011719 Conserved hypothetical protein CHP02058 DOE78_12860 b639244b623c699558c36c8078f32fca 119 Gene3D G3DSA:3.30.1330.20 1 118 4.5E-42 T 01-11-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 DOE78_12860 b639244b623c699558c36c8078f32fca 119 TIGRFAM TIGR02058 lin0512_fam: conserved hypothetical protein 3 119 6.2E-55 T 01-11-2018 IPR011719 Conserved hypothetical protein CHP02058 DOE78_07255 3ff8000fe48113d6717e5018218cd28c 81 Pfam PF00462 Glutaredoxin 4 62 5.9E-15 T 01-11-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DOE78_07255 3ff8000fe48113d6717e5018218cd28c 81 SUPERFAMILY SSF52833 3 75 2.87E-18 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_07255 3ff8000fe48113d6717e5018218cd28c 81 Gene3D G3DSA:3.40.30.10 1 77 3.1E-23 T 01-11-2018 DOE78_05115 5ef52ec701baf03c5f06081b74431946 300 Pfam PF08338 Domain of unknown function (DUF1731) 252 298 3.5E-21 T 01-11-2018 IPR013549 Domain of unknown function DUF1731 DOE78_05115 5ef52ec701baf03c5f06081b74431946 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 295 3.7E-107 T 01-11-2018 IPR010099 Epimerase family protein SDR39U1 DOE78_05115 5ef52ec701baf03c5f06081b74431946 300 Gene3D G3DSA:3.40.50.720 2 299 1.7E-74 T 01-11-2018 DOE78_05115 5ef52ec701baf03c5f06081b74431946 300 SUPERFAMILY SSF51735 1 296 1.83E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_05115 5ef52ec701baf03c5f06081b74431946 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 4.4E-15 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_18065 89e37c1eb1423b2a44c62f0267cae971 161 ProDom PD104119 YSXD OB2071 ORFY 1 161 4.0E-20 T 01-11-2018 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 TIGRFAM TIGR00131 gal_kin: galactokinase 6 387 7.7E-128 T 01-11-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 Pfam PF00288 GHMP kinases N terminal domain 115 182 9.2E-13 T 01-11-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 Pfam PF08544 GHMP kinases C terminal 285 367 4.9E-13 T 01-11-2018 IPR013750 GHMP kinase, C-terminal domain DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 SUPERFAMILY SSF55060 207 386 1.73E-56 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PIRSF PIRSF000530 1 389 7.5E-124 T 01-11-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00473 Galactokinase signature 27 45 7.6E-28 T 01-11-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00473 Galactokinase signature 270 284 7.6E-28 T 01-11-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00473 Galactokinase signature 92 103 7.6E-28 T 01-11-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00473 Galactokinase signature 113 131 7.6E-28 T 01-11-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 01-11-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 01-11-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 Pfam PF10509 Galactokinase galactose-binding signature 9 57 1.1E-20 T 01-11-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 Gene3D G3DSA:3.30.70.890 203 363 3.7E-138 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00959 Mevalonate kinase family signature 25 49 1.8E-43 T 01-11-2018 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00959 Mevalonate kinase family signature 163 182 1.8E-43 T 01-11-2018 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00959 Mevalonate kinase family signature 334 351 1.8E-43 T 01-11-2018 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 PRINTS PR00959 Mevalonate kinase family signature 120 142 1.8E-43 T 01-11-2018 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 Hamap MF_00246 Galactokinase [galK]. 25 387 48.472 T 01-11-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 Gene3D G3DSA:3.30.230.10 20 202 3.7E-138 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_04005 ee07d4d94b89d983db6c3d43efded74b 394 SUPERFAMILY SSF54211 4 204 1.44E-62 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_21020 5ea5bdf416907a8349bf1a640cca9d7d 353 Gene3D G3DSA:3.40.50.1100 10 322 1.9E-124 T 01-11-2018 DOE78_21020 5ea5bdf416907a8349bf1a640cca9d7d 353 Gene3D G3DSA:3.40.50.1100 59 155 1.9E-124 T 01-11-2018 DOE78_21020 5ea5bdf416907a8349bf1a640cca9d7d 353 SUPERFAMILY SSF53686 5 350 9.17E-107 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE78_21020 5ea5bdf416907a8349bf1a640cca9d7d 353 TIGRFAM TIGR00260 thrC: threonine synthase 7 323 4.4E-104 T 01-11-2018 IPR004450 Threonine synthase-like DOE78_21020 5ea5bdf416907a8349bf1a640cca9d7d 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 316 2.2E-78 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DOE78_21020 5ea5bdf416907a8349bf1a640cca9d7d 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 01-11-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DOE78_21020 5ea5bdf416907a8349bf1a640cca9d7d 353 PIRSF PIRSF038945 1 348 2.6E-160 T 01-11-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 DOE78_15705 5a04dc4343e7ad98ba5dd037c36a1e25 317 Pfam PF01966 HD domain 99 222 2.4E-20 T 01-11-2018 IPR006674 HD domain DOE78_15705 5a04dc4343e7ad98ba5dd037c36a1e25 317 Gene3D G3DSA:1.10.3210.10 2 261 4.8E-63 T 01-11-2018 DOE78_15705 5a04dc4343e7ad98ba5dd037c36a1e25 317 SUPERFAMILY SSF109604 88 252 8.3E-33 T 01-11-2018 DOE78_15705 5a04dc4343e7ad98ba5dd037c36a1e25 317 SMART SM00471 95 231 1.9E-11 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 Pfam PF00005 ABC transporter 21 172 9.8E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 Gene3D G3DSA:3.40.50.300 2 238 4.4E-54 T 01-11-2018 DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 SUPERFAMILY SSF52540 4 232 1.11E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 SUPERFAMILY SSF52540 268 484 1.28E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 Pfam PF00005 ABC transporter 272 425 5.6E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 Gene3D G3DSA:3.40.50.300 261 506 6.9E-45 T 01-11-2018 DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 SMART SM00382 280 474 2.6E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_02525 a124eb1d2753ddb97a4f8be03e12d093 510 SMART SM00382 30 220 2.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 95 454 6.4E-17 T 01-11-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 390 421 - T 01-11-2018 IPR030390 RNA methyltransferase TrmA, active site DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 22 451 1.6E-181 T 01-11-2018 DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 SUPERFAMILY SSF53335 74 454 4.07E-75 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 Gene3D G3DSA:2.40.50.140 2 85 6.2E-25 T 01-11-2018 DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 SUPERFAMILY SSF50249 4 65 1.83E-15 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 Gene3D G3DSA:3.40.50.150 87 453 1.3E-113 T 01-11-2018 DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 Pfam PF01938 TRAM domain 11 64 3.4E-12 T 01-11-2018 IPR002792 TRAM domain DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 Gene3D G3DSA:3.40.1350.30 136 291 1.3E-113 T 01-11-2018 DOE78_03575 463edc9d333dd0fa289d2fb735fa8981 460 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 441 451 - T 01-11-2018 IPR030391 RNA methyltransferase TrmA, conserved site DOE78_04515 a752941b074cacb6235a190e1252a5ef 310 Gene3D G3DSA:3.30.420.10 1 173 3.1E-30 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_04515 a752941b074cacb6235a190e1252a5ef 310 SUPERFAMILY SSF53098 1 209 5.22E-32 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_04515 a752941b074cacb6235a190e1252a5ef 310 SMART SM00479 2 167 2.3E-9 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_04515 a752941b074cacb6235a190e1252a5ef 310 Gene3D G3DSA:3.40.50.10190 191 309 1.3E-19 T 01-11-2018 IPR036420 BRCT domain superfamily DOE78_04515 a752941b074cacb6235a190e1252a5ef 310 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 221 308 3.1E-7 T 01-11-2018 IPR001357 BRCT domain DOE78_04515 a752941b074cacb6235a190e1252a5ef 310 Pfam PF00929 Exonuclease 5 157 5.4E-13 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_04515 a752941b074cacb6235a190e1252a5ef 310 SUPERFAMILY SSF52113 220 308 5.89E-11 T 01-11-2018 IPR036420 BRCT domain superfamily DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 49.846 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 SUPERFAMILY SSF52096 6 315 2.42E-101 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 5.0E-47 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 5.0E-47 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 5.0E-47 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 5.0E-47 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 5.0E-47 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 5.0E-47 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 Gene3D G3DSA:3.90.226.10 2 317 4.7E-124 T 01-11-2018 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 315 1.4E-160 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18485 5a140e105c2b195b900b7f2b5c0a9788 326 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 2.8E-65 T 01-11-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_16205 570450c3b557796880a16dd1b369837a 322 PIRSF PIRSF500176 1 322 2.9E-92 T 01-11-2018 DOE78_16205 570450c3b557796880a16dd1b369837a 322 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.4E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 1.4E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 1.4E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 Gene3D G3DSA:3.40.50.40 208 322 3.8E-28 T 01-11-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 01-11-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 SUPERFAMILY SSF53774 1 322 4.06E-100 T 01-11-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 Gene3D G3DSA:3.40.50.1170 2 207 1.1E-66 T 01-11-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 01-11-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DOE78_16205 570450c3b557796880a16dd1b369837a 322 SMART SM00870 3 318 1.6E-134 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 PIRSF PIRSF001220 1 322 1.1E-95 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_16205 570450c3b557796880a16dd1b369837a 322 Pfam PF00710 Asparaginase, N-terminal 4 192 6.5E-59 T 01-11-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DOE78_02580 c4173051e343280fd6cf2423119096d8 288 Gene3D G3DSA:1.10.3720.10 46 286 4.9E-61 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02580 c4173051e343280fd6cf2423119096d8 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 284 2.6E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_02580 c4173051e343280fd6cf2423119096d8 288 SUPERFAMILY SSF161098 50 273 4.71E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Gene3D G3DSA:3.20.20.80 359 687 6.6E-169 T 01-11-2018 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 SUPERFAMILY SSF51215 27 154 1.14E-14 T 01-11-2018 IPR037923 Transcription regulator HTH-like DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 SUPERFAMILY SSF46689 225 274 6.27E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Pfam PF02311 AraC-like ligand binding domain 25 149 6.6E-13 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 475 484 - T 01-11-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Gene3D G3DSA:2.60.120.10 19 96 2.3E-11 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 SMART SM00342 189 272 2.1E-25 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 SUPERFAMILY SSF51445 340 689 9.67E-77 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 SUPERFAMILY SSF51011 676 831 2.3E-22 T 01-11-2018 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Gene3D G3DSA:1.10.10.60 223 277 7.4E-14 T 01-11-2018 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 PRINTS PR00745 Glycosyl hydrolase family 39 signature 455 472 4.5E-15 T 01-11-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 PRINTS PR00745 Glycosyl hydrolase family 39 signature 407 423 4.5E-15 T 01-11-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 PRINTS PR00745 Glycosyl hydrolase family 39 signature 472 488 4.5E-15 T 01-11-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 PRINTS PR00745 Glycosyl hydrolase family 39 signature 776 790 4.5E-15 T 01-11-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 PRINTS PR00745 Glycosyl hydrolase family 39 signature 535 549 4.5E-15 T 01-11-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Pfam PF01229 Glycosyl hydrolases family 39 326 828 8.6E-86 T 01-11-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Gene3D G3DSA:1.10.10.60 174 222 7.1E-10 T 01-11-2018 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Gene3D G3DSA:2.60.40.1500 688 827 6.6E-169 T 01-11-2018 DOE78_20220 31684d7b73cc23fdecbc545c1af5d471 834 Pfam PF12833 Helix-turn-helix domain 195 273 8.4E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 SUPERFAMILY SSF69075 317 420 5.36E-17 T 01-11-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 29.583 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 SUPERFAMILY SSF51735 162 315 7.8E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 6.7E-48 T 01-11-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 Gene3D G3DSA:3.30.460.30 1 158 9.9E-54 T 01-11-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 322 419 1.3E-20 T 01-11-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 2.2E-45 T 01-11-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 SUPERFAMILY SSF69742 1 158 3.01E-46 T 01-11-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 PIRSF PIRSF000445 1 433 1.1E-154 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 8.1E-158 T 01-11-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DOE78_18060 7486bed22033b75e473bc8b1db6487e3 448 Gene3D G3DSA:3.40.50.720 161 313 1.8E-46 T 01-11-2018 DOE78_14250 aecdeeacdb39fe730018e50b826938d5 332 Gene3D G3DSA:3.20.20.30 3 332 3.4E-104 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_14250 aecdeeacdb39fe730018e50b826938d5 332 Pfam PF00296 Luciferase-like monooxygenase 22 303 9.3E-38 T 01-11-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DOE78_14250 aecdeeacdb39fe730018e50b826938d5 332 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 2.1E-140 T 01-11-2018 IPR019949 Luciferase family oxidoreductase, group 1 DOE78_14250 aecdeeacdb39fe730018e50b826938d5 332 SUPERFAMILY SSF51679 7 328 1.3E-89 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_14575 b31832436e895276400b6dd6b88c438c 115 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 111 6.6E-25 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DOE78_14575 b31832436e895276400b6dd6b88c438c 115 TIGRFAM TIGR00494 crcB: protein CrcB 5 115 2.8E-24 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DOE78_14575 b31832436e895276400b6dd6b88c438c 115 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 115 17.31 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DOE78_14385 8eca916ffd18bd770ad7f06c93df00b0 851 SMART SM00490 544 633 1.4E-20 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_14385 8eca916ffd18bd770ad7f06c93df00b0 851 Gene3D G3DSA:1.20.272.40 658 730 5.2E-107 T 01-11-2018 DOE78_14385 8eca916ffd18bd770ad7f06c93df00b0 851 SUPERFAMILY SSF52540 374 642 3.33E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14385 8eca916ffd18bd770ad7f06c93df00b0 851 Gene3D G3DSA:3.40.50.300 513 657 5.2E-107 T 01-11-2018 DOE78_14385 8eca916ffd18bd770ad7f06c93df00b0 851 Gene3D G3DSA:3.40.50.300 374 512 5.2E-107 T 01-11-2018 DOE78_14385 8eca916ffd18bd770ad7f06c93df00b0 851 Pfam PF00271 Helicase conserved C-terminal domain 528 633 1.5E-13 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_14655 01879420192bc687a80377ffe9a64225 315 SUPERFAMILY SSF144083 249 312 1.09E-24 T 01-11-2018 DOE78_14655 01879420192bc687a80377ffe9a64225 315 Gene3D G3DSA:1.20.58.340 124 236 1.1E-25 T 01-11-2018 DOE78_14655 01879420192bc687a80377ffe9a64225 315 Gene3D G3DSA:3.30.460.20 7 123 4.4E-27 T 01-11-2018 DOE78_14655 01879420192bc687a80377ffe9a64225 315 SUPERFAMILY SSF143865 25 247 1.7E-54 T 01-11-2018 DOE78_14655 01879420192bc687a80377ffe9a64225 315 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 6 314 3.2E-93 T 01-11-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 DOE78_14655 01879420192bc687a80377ffe9a64225 315 Gene3D G3DSA:1.20.58.340 238 314 2.5E-34 T 01-11-2018 DOE78_14655 01879420192bc687a80377ffe9a64225 315 Pfam PF01544 CorA-like Mg2+ transporter protein 28 310 1.5E-79 T 01-11-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.8E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.8E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.7E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 SUPERFAMILY SSF64288 77 229 2.2E-38 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 SMART SM00345 8 67 1.2E-13 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 Pfam PF07702 UTRA domain 91 225 3.1E-31 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 Gene3D G3DSA:1.10.10.10 1 67 2.2E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 SMART SM00866 88 227 4.5E-28 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 Gene3D G3DSA:3.40.1410.10 74 228 2.5E-39 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_14045 52843d5ee7d7349bef739c05a09f084c 235 SUPERFAMILY SSF46785 7 77 4.17E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_13600 c364ebdf0fd9b56cace79b04311f347c 597 Pfam PF13199 Glycosyl hydrolase family 66 50 592 5.1E-198 T 01-11-2018 IPR025092 Glycosyl hydrolase family 66 DOE78_13600 c364ebdf0fd9b56cace79b04311f347c 597 Gene3D G3DSA:3.20.20.80 138 474 6.1E-121 T 01-11-2018 DOE78_13600 c364ebdf0fd9b56cace79b04311f347c 597 SUPERFAMILY SSF51445 173 390 1.3E-6 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_13600 c364ebdf0fd9b56cace79b04311f347c 597 Gene3D G3DSA:2.60.40.10 38 137 3.6E-21 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_13600 c364ebdf0fd9b56cace79b04311f347c 597 Gene3D G3DSA:2.60.40.1180 477 597 1.9E-30 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 PIRSF PIRSF037215 1 410 3.3E-192 T 01-11-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 4 409 5.2E-206 T 01-11-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 SUPERFAMILY SSF55031 211 321 4.29E-39 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 Pfam PF01546 Peptidase family M20/M25/M40 141 403 8.0E-14 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 01-11-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 Pfam PF07687 Peptidase dimerisation domain 209 311 4.4E-10 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 01-11-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 Gene3D G3DSA:3.40.630.10 5 402 2.1E-183 T 01-11-2018 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 Hamap MF_00550 Peptidase T [pepT]. 2 406 59.383 T 01-11-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 SUPERFAMILY SSF53187 4 406 1.11E-82 T 01-11-2018 DOE78_05100 b187d873e1ca86e3f1450e02ae0bcfb3 411 Gene3D G3DSA:3.30.70.360 211 321 2.1E-183 T 01-11-2018 DOE78_19585 c4a0b4e48155377d3d72e596fcf2f4e8 118 Gene3D G3DSA:1.10.10.10 3 98 5.3E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_19585 c4a0b4e48155377d3d72e596fcf2f4e8 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 2.6E-8 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_19585 c4a0b4e48155377d3d72e596fcf2f4e8 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 2.6E-8 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_19585 c4a0b4e48155377d3d72e596fcf2f4e8 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 2.6E-8 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_19585 c4a0b4e48155377d3d72e596fcf2f4e8 118 SUPERFAMILY SSF46785 3 92 6.12E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_19585 c4a0b4e48155377d3d72e596fcf2f4e8 118 Pfam PF12840 Helix-turn-helix domain 10 68 1.9E-7 T 01-11-2018 DOE78_19585 c4a0b4e48155377d3d72e596fcf2f4e8 118 SMART SM00418 11 89 1.5E-18 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_14765 2199014cad3e577e534fc021841d5c8e 258 Pfam PF04748 Divergent polysaccharide deacetylase 30 246 2.3E-64 T 01-11-2018 IPR006837 Divergent polysaccharide deacetylase DOE78_14765 2199014cad3e577e534fc021841d5c8e 258 SUPERFAMILY SSF88713 26 246 2.89E-62 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_14765 2199014cad3e577e534fc021841d5c8e 258 Gene3D G3DSA:3.20.20.370 23 247 2.5E-71 T 01-11-2018 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 Pfam PF06628 Catalase-related immune-responsive 437 499 1.6E-20 T 01-11-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 ProSitePatterns PS00438 Catalase proximal active site signature. 57 73 - T 01-11-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 Gene3D G3DSA:2.40.180.10 17 521 4.0E-216 T 01-11-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 PIRSF PIRSF038928 9 505 5.6E-179 T 01-11-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 Pfam PF00199 Catalase 21 410 1.2E-171 T 01-11-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 SMART SM01060 21 414 4.6E-250 T 01-11-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 PRINTS PR00067 Catalase signature 102 120 1.1E-64 T 01-11-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 PRINTS PR00067 Catalase signature 307 334 1.1E-64 T 01-11-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 PRINTS PR00067 Catalase signature 339 365 1.1E-64 T 01-11-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 PRINTS PR00067 Catalase signature 142 160 1.1E-64 T 01-11-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 PRINTS PR00067 Catalase signature 34 57 1.1E-64 T 01-11-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 PRINTS PR00067 Catalase signature 123 140 1.1E-64 T 01-11-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 352 360 - T 01-11-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_20590 ad9368baeade3586dd9a01b41f7ea06c 548 SUPERFAMILY SSF56634 12 506 3.93E-197 T 01-11-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DOE78_15455 45540871ca8145b0c7994d5084bf7393 488 Gene3D G3DSA:3.50.50.60 132 258 1.7E-8 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_15455 45540871ca8145b0c7994d5084bf7393 488 Gene3D G3DSA:3.50.50.60 1 103 1.8E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_15455 45540871ca8145b0c7994d5084bf7393 488 SUPERFAMILY SSF51905 3 479 1.04E-22 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_15455 45540871ca8145b0c7994d5084bf7393 488 PIRSF PIRSF038984 131 481 1.0E-18 T 01-11-2018 IPR028348 FAD dependent protein DOE78_15455 45540871ca8145b0c7994d5084bf7393 488 PIRSF PIRSF038984 1 102 3.5E-7 T 01-11-2018 IPR028348 FAD dependent protein DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Gene3D G3DSA:2.60.40.10 958 1043 6.5E-13 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Gene3D G3DSA:2.60.120.260 752 877 8.2E-19 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Gene3D G3DSA:2.60.120.200 1132 1346 9.0E-35 T 01-11-2018 DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SUPERFAMILY SSF49299 505 591 2.75E-9 T 01-11-2018 IPR035986 PKD domain superfamily DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SUPERFAMILY SSF49299 1044 1132 6.93E-10 T 01-11-2018 IPR035986 PKD domain superfamily DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SUPERFAMILY SSF49899 1137 1341 2.88E-39 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SUPERFAMILY SSF49299 959 1038 1.01E-11 T 01-11-2018 IPR035986 PKD domain superfamily DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1179 1335 2.2E-20 T 01-11-2018 DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Pfam PF11617 Putative metal-binding motif 698 723 1.2E-6 T 01-11-2018 IPR021655 Putative metal-binding motif DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SMART SM00089 877 959 7.7E-19 T 01-11-2018 IPR022409 PKD/Chitinase domain DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SMART SM00089 1051 1134 2.6E-5 T 01-11-2018 IPR022409 PKD/Chitinase domain DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SMART SM00089 508 592 0.0018 T 01-11-2018 IPR022409 PKD/Chitinase domain DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SMART SM00089 960 1047 3.6E-5 T 01-11-2018 IPR022409 PKD/Chitinase domain DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SUPERFAMILY SSF49785 756 882 2.84E-16 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Pfam PF00801 PKD domain 886 948 2.1E-14 T 01-11-2018 IPR000601 PKD domain DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Pfam PF00801 PKD domain 971 1028 4.1E-8 T 01-11-2018 IPR000601 PKD domain DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Pfam PF00754 F5/8 type C domain 759 873 1.9E-16 T 01-11-2018 IPR000421 Coagulation factor 5/8 C-terminal domain DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 SUPERFAMILY SSF49299 890 958 3.92E-17 T 01-11-2018 IPR035986 PKD domain superfamily DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Gene3D G3DSA:2.60.40.10 878 957 1.2E-18 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Gene3D G3DSA:2.60.40.10 1044 1131 1.2E-13 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_04910 388550b21c0067505e209dd3e4a269e3 1832 Gene3D G3DSA:2.60.40.10 505 589 1.1E-12 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_07580 f6065556a0a1ee68b78f2409cd20b062 477 SUPERFAMILY SSF55383 386 469 2.88E-5 T 01-11-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily DOE78_07580 f6065556a0a1ee68b78f2409cd20b062 477 Pfam PF07833 Copper amine oxidase N-terminal domain 388 471 2.1E-5 T 01-11-2018 IPR012854 Copper amine oxidase-like, N-terminal DOE78_19635 e3a0345686780687272b12861f44da68 380 SUPERFAMILY SSF53448 3 340 4.1E-87 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_19635 e3a0345686780687272b12861f44da68 380 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 6 360 4.7E-145 T 01-11-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DOE78_19635 e3a0345686780687272b12861f44da68 380 Gene3D G3DSA:2.160.10.10 275 380 9.7E-27 T 01-11-2018 DOE78_19635 e3a0345686780687272b12861f44da68 380 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 3 378 48.955 T 01-11-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DOE78_19635 e3a0345686780687272b12861f44da68 380 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 12 31 - T 01-11-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DOE78_19635 e3a0345686780687272b12861f44da68 380 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 190 200 - T 01-11-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DOE78_19635 e3a0345686780687272b12861f44da68 380 Gene3D G3DSA:3.90.550.10 1 274 4.7E-93 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_19635 e3a0345686780687272b12861f44da68 380 SUPERFAMILY SSF51161 285 361 1.18E-13 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_19635 e3a0345686780687272b12861f44da68 380 Pfam PF00483 Nucleotidyl transferase 8 260 2.8E-69 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 Gene3D G3DSA:3.40.1410.10 77 240 4.5E-56 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 Gene3D G3DSA:1.10.10.10 8 76 2.9E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 SMART SM00345 14 73 1.3E-20 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 Pfam PF07702 UTRA domain 94 233 2.3E-42 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 SMART SM00866 94 233 1.8E-43 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.6E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.6E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.7E-19 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 SUPERFAMILY SSF64288 61 240 4.87E-58 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_21490 cadc653232c2ff2634ab4595028b59cc 240 SUPERFAMILY SSF46785 1 77 5.45E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 SMART SM00862 149 225 4.1E-21 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 SUPERFAMILY SSF52172 1 127 4.7E-40 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 Gene3D G3DSA:1.10.10.10 128 228 2.4E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 SMART SM00448 1 111 3.7E-42 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 Gene3D G3DSA:3.40.50.2300 1 127 2.0E-37 T 01-11-2018 DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 SUPERFAMILY SSF46894 126 225 3.68E-27 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 5.7E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_03735 38738c5122130fce8747ae1ac8ba3b10 228 Pfam PF00072 Response regulator receiver domain 3 112 8.4E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 SUPERFAMILY SSF46977 443 579 3.14E-43 T 01-11-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 SUPERFAMILY SSF56425 231 353 3.74E-31 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 2.0E-5 T 01-11-2018 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.0E-5 T 01-11-2018 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 Gene3D G3DSA:3.90.700.10 258 367 2.3E-124 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 Gene3D G3DSA:3.50.50.60 6 403 2.3E-124 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.2E-9 T 01-11-2018 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 7.2E-9 T 01-11-2018 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 Gene3D G3DSA:1.20.58.100 422 539 1.2E-33 T 01-11-2018 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 8.9E-41 T 01-11-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 SUPERFAMILY SSF51905 6 426 2.11E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 1.2E-281 T 01-11-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 01-11-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 Pfam PF00890 FAD binding domain 6 392 4.6E-89 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 PIRSF PIRSF000171 341 575 1.8E-13 T 01-11-2018 DOE78_18215 cdaf5bceb0721124d4c57b397b64c34e 586 PIRSF PIRSF000171 3 240 1.3E-18 T 01-11-2018 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 PIRSF PIRSF006809 1 416 1.0E-147 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 4.0E-31 T 01-11-2018 IPR032305 GTP-binding protein, middle domain DOE78_08645 d643a9309b9db04df4e7357964240e21 418 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 4.9E-10 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 4.9E-10 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 Gene3D G3DSA:3.40.50.11060 19 139 4.0E-42 T 01-11-2018 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 Gene3D G3DSA:3.40.50.300 200 364 1.4E-33 T 01-11-2018 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 9 356 5.1E-145 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 Pfam PF13167 GTP-binding GTPase N-terminal 26 113 5.8E-33 T 01-11-2018 IPR025121 GTPase HflX, N-terminal DOE78_08645 d643a9309b9db04df4e7357964240e21 418 Pfam PF01926 50S ribosome-binding GTPase 200 319 1.2E-19 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 Hamap MF_00900 GTPase HflX [hflX]. 28 386 46.288 T 01-11-2018 IPR016496 GTPase HflX GO:0005525 DOE78_08645 d643a9309b9db04df4e7357964240e21 418 SUPERFAMILY SSF52540 198 366 9.43E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 8.1E-68 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 Gene3D G3DSA:3.50.50.60 6 325 1.4E-115 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 SUPERFAMILY SSF51905 6 367 5.1E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 2.8E-40 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.8E-40 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 2.8E-40 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 2.8E-40 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 2.8E-40 T 01-11-2018 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 321 6.8E-73 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 PIRSF PIRSF000350 1 452 1.3E-92 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 Gene3D G3DSA:3.50.50.60 146 265 1.4E-115 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 Gene3D G3DSA:3.30.390.30 339 459 1.5E-41 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 1.1E-33 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 459 1.5E-173 T 01-11-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DOE78_09075 ef11626d24d36a57976aa4a2b93e81d9 459 SUPERFAMILY SSF55424 336 458 1.55E-38 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_17540 990768e0b12e317881a291abb3723a90 783 Pfam PF03772 Competence protein 219 479 3.1E-56 T 01-11-2018 IPR004477 ComEC/Rec2-related protein DOE78_17540 990768e0b12e317881a291abb3723a90 783 Pfam PF13567 Domain of unknown function (DUF4131) 135 179 4.3E-9 T 01-11-2018 IPR025405 Domain of unknown function DUF4131 DOE78_17540 990768e0b12e317881a291abb3723a90 783 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 240 408 3.8E-30 T 01-11-2018 IPR004477 ComEC/Rec2-related protein DOE78_17540 990768e0b12e317881a291abb3723a90 783 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 139 759 5.9E-119 T 01-11-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 DOE78_17540 990768e0b12e317881a291abb3723a90 783 Gene3D G3DSA:3.60.15.10 510 772 1.7E-72 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_17540 990768e0b12e317881a291abb3723a90 783 SUPERFAMILY SSF56281 512 767 1.0E-52 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_17540 990768e0b12e317881a291abb3723a90 783 Pfam PF00753 Metallo-beta-lactamase superfamily 518 603 4.3E-10 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_17540 990768e0b12e317881a291abb3723a90 783 SMART SM00849 520 730 9.3E-12 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_08210 027630271e8a5cfafa1211cbf5fdd094 403 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 324 401 1.7E-22 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE78_08210 027630271e8a5cfafa1211cbf5fdd094 403 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 384 2.6E-83 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE78_08210 027630271e8a5cfafa1211cbf5fdd094 403 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site DOE78_08210 027630271e8a5cfafa1211cbf5fdd094 403 SUPERFAMILY SSF117143 91 363 1.12E-57 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE78_08210 027630271e8a5cfafa1211cbf5fdd094 403 Pfam PF00460 Flagella basal body rod protein 5 35 9.4E-13 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DOE78_08210 027630271e8a5cfafa1211cbf5fdd094 403 Gene3D G3DSA:2.60.98.20 151 285 2.8E-8 T 01-11-2018 IPR037058 Flagellar hook protein FlgE superfamily DOE78_08210 027630271e8a5cfafa1211cbf5fdd094 403 Pfam PF07559 Flagellar basal body protein FlaE 186 282 1.8E-6 T 01-11-2018 IPR011491 Flagellar hook protein FlgE DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 PIRSF PIRSF000732 1 571 7.3E-231 T 01-11-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 Gene3D G3DSA:3.20.20.60 235 569 1.7E-129 T 01-11-2018 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 Gene3D G3DSA:1.10.274.10 23 146 4.3E-83 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 SUPERFAMILY SSF47831 23 143 3.66E-37 T 01-11-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 540 4.5E-132 T 01-11-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 01-11-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 1.7E-25 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 SUPERFAMILY SSF52009 125 243 3.4E-39 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 Gene3D G3DSA:3.50.30.10 6 234 4.3E-83 T 01-11-2018 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.3E-32 T 01-11-2018 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.3E-32 T 01-11-2018 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.3E-32 T 01-11-2018 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.3E-32 T 01-11-2018 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 7.2E-33 T 01-11-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 01-11-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 SUPERFAMILY SSF51621 249 549 2.88E-115 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DOE78_07170 0f124fff97d530a54170ab635b5517bc 571 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 564 4.8E-259 T 01-11-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 SUPERFAMILY SSF56601 170 590 5.46E-104 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 SUPERFAMILY SSF56519 51 219 5.23E-44 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 201 3.6E-23 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 Gene3D G3DSA:3.90.1310.30 49 219 2.1E-45 T 01-11-2018 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 Gene3D G3DSA:3.30.450.330 221 560 4.3E-114 T 01-11-2018 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 Gene3D G3DSA:3.30.10.20 581 635 2.3E-5 T 01-11-2018 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 Gene3D G3DSA:3.40.710.10 282 477 4.3E-114 T 01-11-2018 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 12 636 4.6E-265 T 01-11-2018 IPR011927 Stage V sporulation protein D DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 555 6.3E-88 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 SMART SM00740 579 637 1.9E-10 T 01-11-2018 IPR005543 PASTA domain DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 SUPERFAMILY SSF54184 583 636 6.41E-10 T 01-11-2018 DOE78_07695 50438bd095dd3b5e50f80b1abbd97fbd 651 Pfam PF03793 PASTA domain 583 635 1.2E-8 T 01-11-2018 IPR005543 PASTA domain DOE78_17515 96d9dbb44fad10fd6f519034838c1b72 398 SUPERFAMILY SSF53187 258 381 2.32E-8 T 01-11-2018 DOE78_17515 96d9dbb44fad10fd6f519034838c1b72 398 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 180 382 4.4E-73 T 01-11-2018 IPR010897 Sporulation stage II, protein P DOE78_17515 96d9dbb44fad10fd6f519034838c1b72 398 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 103 378 1.3E-74 T 01-11-2018 IPR010897 Sporulation stage II, protein P DOE78_06635 d8131be0962edd61030df908c9320586 131 Pfam PF03960 ArsC family 5 113 1.9E-23 T 01-11-2018 IPR006660 Arsenate reductase-like DOE78_06635 d8131be0962edd61030df908c9320586 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 37.985 T 01-11-2018 IPR023731 Regulatory protein Spx GO:0045892 DOE78_06635 d8131be0962edd61030df908c9320586 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 1.2E-37 T 01-11-2018 IPR006504 Transcriptional regulator Spx/MgsR DOE78_06635 d8131be0962edd61030df908c9320586 131 SUPERFAMILY SSF52833 1 129 2.51E-39 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_06635 d8131be0962edd61030df908c9320586 131 Gene3D G3DSA:3.40.30.10 1 131 3.0E-47 T 01-11-2018 DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 SUPERFAMILY SSF52518 383 562 4.29E-53 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 175 1.6E-55 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 Gene3D G3DSA:3.40.50.970 372 558 2.6E-107 T 01-11-2018 DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 Gene3D G3DSA:3.40.50.1220 201 371 2.6E-107 T 01-11-2018 DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 337 1.4E-38 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 SUPERFAMILY SSF52518 6 177 7.15E-50 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 Gene3D G3DSA:3.40.50.970 1 185 2.4E-59 T 01-11-2018 DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 SUPERFAMILY SSF52467 160 369 2.7E-46 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 443 462 - T 01-11-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DOE78_14160 835b8f8adaccb7540c158d6552e4647e 588 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 407 558 9.7E-39 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 SUPERFAMILY SSF52540 283 522 8.16E-64 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 SUPERFAMILY SSF46689 493 586 1.68E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 Gene3D G3DSA:3.40.50.300 271 456 2.1E-63 T 01-11-2018 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 Gene3D G3DSA:3.30.450.40 8 185 9.3E-38 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 Gene3D G3DSA:1.10.8.60 457 525 4.6E-13 T 01-11-2018 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 371 386 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 Pfam PF00158 Sigma-54 interaction domain 284 450 9.0E-67 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 308 321 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 SMART SM00382 304 448 3.6E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 Pfam PF02954 Bacterial regulatory protein, Fis family 547 584 4.2E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 Gene3D G3DSA:1.10.10.60 526 588 1.2E-13 T 01-11-2018 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 550 567 7.9E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_11710 02da639d70c8b2647c3d0aee63b80b52 588 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 567 587 7.9E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_05430 6b3029dd4bba2f09373d3738a51c9733 262 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 254 2.6E-56 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_05430 6b3029dd4bba2f09373d3738a51c9733 262 Gene3D G3DSA:3.40.50.1000 6 251 6.0E-57 T 01-11-2018 IPR023214 HAD superfamily DOE78_05430 6b3029dd4bba2f09373d3738a51c9733 262 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 228 1.1E-29 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_05430 6b3029dd4bba2f09373d3738a51c9733 262 SUPERFAMILY SSF56784 2 259 2.04E-55 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_05430 6b3029dd4bba2f09373d3738a51c9733 262 ProSitePatterns PS01229 Hypothetical cof family signature 2. 209 231 - T 01-11-2018 DOE78_05430 6b3029dd4bba2f09373d3738a51c9733 262 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 253 1.7E-56 T 01-11-2018 DOE78_05430 6b3029dd4bba2f09373d3738a51c9733 262 Gene3D G3DSA:3.30.1240.10 82 184 6.0E-57 T 01-11-2018 DOE78_17525 ff3eae19cbe3c7c5f22ca95b054d820f 88 Gene3D G3DSA:1.20.58.110 1 87 3.1E-31 T 01-11-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17525 ff3eae19cbe3c7c5f22ca95b054d820f 88 SUPERFAMILY SSF46992 3 86 5.1E-30 T 01-11-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17525 ff3eae19cbe3c7c5f22ca95b054d820f 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.6E-28 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17525 ff3eae19cbe3c7c5f22ca95b054d820f 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.972 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17525 ff3eae19cbe3c7c5f22ca95b054d820f 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 15 88 1.0E-10 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17525 ff3eae19cbe3c7c5f22ca95b054d820f 88 Pfam PF01649 Ribosomal protein S20 2 84 3.8E-30 T 01-11-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 Gene3D G3DSA:1.10.287.130 202 260 6.3E-16 T 01-11-2018 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 SMART SM00387 308 414 2.7E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_15145 5ec462592039c9df901df7afedc30e39 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 393 1.9E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 412 1.0E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_15145 5ec462592039c9df901df7afedc30e39 419 SUPERFAMILY SSF55785 80 185 1.24E-10 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_15145 5ec462592039c9df901df7afedc30e39 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 260 8.0E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 Pfam PF13426 PAS domain 96 161 8.6E-6 T 01-11-2018 IPR000014 PAS domain DOE78_15145 5ec462592039c9df901df7afedc30e39 419 SUPERFAMILY SSF47384 193 260 5.89E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 SUPERFAMILY SSF55874 283 411 4.58E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15145 5ec462592039c9df901df7afedc30e39 419 Gene3D G3DSA:3.30.565.10 269 416 9.4E-33 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15145 5ec462592039c9df901df7afedc30e39 419 Gene3D G3DSA:3.30.450.20 78 185 1.3E-12 T 01-11-2018 DOE78_15145 5ec462592039c9df901df7afedc30e39 419 SMART SM00388 198 263 2.5E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 Gene3D G3DSA:1.25.40.20 285 421 4.3E-37 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 Gene3D G3DSA:3.30.2010.10 65 156 1.5E-11 T 01-11-2018 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 Pfam PF12796 Ankyrin repeats (3 copies) 294 365 6.0E-15 T 01-11-2018 IPR020683 Ankyrin repeat-containing domain DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 PRINTS PR01415 Ankyrin repeat signature 383 397 2.8E-6 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 PRINTS PR01415 Ankyrin repeat signature 335 350 2.8E-6 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 SMART SM00248 334 363 8.3E-5 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 SMART SM00248 301 330 5.0E-5 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 SMART SM00248 367 396 0.0081 T 01-11-2018 IPR002110 Ankyrin repeat GO:0005515 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 PIRSF PIRSF000654 284 396 1.6E-18 T 01-11-2018 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 PIRSF PIRSF000654 354 421 4.1E-7 T 01-11-2018 DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 SUPERFAMILY SSF48403 284 420 7.62E-36 T 01-11-2018 IPR036770 Ankyrin repeat-containing domain superfamily DOE78_19360 5fea965f6bc1b793f87c1a1d09f52bd8 422 Pfam PF01435 Peptidase family M48 71 155 2.5E-15 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DOE78_00425 cea43343a88fc151182298001aa2d6cb 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 304 2.5E-136 T 01-11-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DOE78_00425 cea43343a88fc151182298001aa2d6cb 308 SUPERFAMILY SSF53686 3 305 8.38E-105 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE78_00425 cea43343a88fc151182298001aa2d6cb 308 Gene3D G3DSA:3.40.50.1100 7 300 1.9E-124 T 01-11-2018 DOE78_00425 cea43343a88fc151182298001aa2d6cb 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 01-11-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DOE78_00425 cea43343a88fc151182298001aa2d6cb 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 2.1E-71 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DOE78_00425 cea43343a88fc151182298001aa2d6cb 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 304 4.5E-145 T 01-11-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DOE78_00425 cea43343a88fc151182298001aa2d6cb 308 Gene3D G3DSA:3.40.50.1100 46 144 1.9E-124 T 01-11-2018 DOE78_18600 bccefa592042473aa04f3d77c7ea1fb9 327 PIRSF PIRSF026567 1 327 3.7E-140 T 01-11-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted DOE78_18600 bccefa592042473aa04f3d77c7ea1fb9 327 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 120 134 1.1E-6 T 01-11-2018 DOE78_18600 bccefa592042473aa04f3d77c7ea1fb9 327 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 240 1.1E-6 T 01-11-2018 DOE78_18600 bccefa592042473aa04f3d77c7ea1fb9 327 Gene3D G3DSA:3.40.50.150 87 327 2.1E-53 T 01-11-2018 DOE78_18600 bccefa592042473aa04f3d77c7ea1fb9 327 SUPERFAMILY SSF53335 23 317 1.66E-47 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_18600 bccefa592042473aa04f3d77c7ea1fb9 327 Pfam PF02384 N-6 DNA Methylase 97 320 5.1E-18 T 01-11-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DOE78_18600 bccefa592042473aa04f3d77c7ea1fb9 327 Gene3D G3DSA:1.10.150.470 1 85 6.2E-27 T 01-11-2018 DOE78_22995 6bbc36babd1982c73d569670715b9621 371 Gene3D G3DSA:3.90.1150.10 246 371 4.3E-42 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_22995 6bbc36babd1982c73d569670715b9621 371 PIRSF PIRSF000390 3 371 1.3E-114 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE78_22995 6bbc36babd1982c73d569670715b9621 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 365 9.4E-133 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE78_22995 6bbc36babd1982c73d569670715b9621 371 Gene3D G3DSA:3.40.640.10 1 243 1.5E-96 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_22995 6bbc36babd1982c73d569670715b9621 371 SUPERFAMILY SSF53383 11 370 7.75E-122 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 Gene3D G3DSA:3.40.50.2300 161 291 5.5E-91 T 01-11-2018 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 SMART SM00354 2 72 4.8E-40 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 TIGRFAM TIGR01481 ccpA: catabolite control protein A 2 332 3.1E-166 T 01-11-2018 IPR006377 Catabolite control protein A GO:0006355 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 Pfam PF13377 Periplasmic binding protein-like domain 170 331 1.3E-32 T 01-11-2018 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 SUPERFAMILY SSF47413 3 60 9.7E-20 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 Gene3D G3DSA:3.40.50.2300 63 310 5.5E-91 T 01-11-2018 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 Gene3D G3DSA:1.10.260.40 1 60 1.3E-28 T 01-11-2018 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 5.7E-20 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 SUPERFAMILY SSF53822 62 332 1.53E-86 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.3E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.3E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_19200 f3b2fe09bd520f7d3e2c96245b670434 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 01-11-2018 DOE78_23560 ad12ccff8c8c07544da682b489477711 627 SUPERFAMILY SSF81301 300 414 9.81E-5 T 01-11-2018 DOE78_23560 ad12ccff8c8c07544da682b489477711 627 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 516 623 3.0E-14 T 01-11-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DOE78_23560 ad12ccff8c8c07544da682b489477711 627 SMART SM00116 183 230 1.1E-9 T 01-11-2018 IPR000644 CBS domain DOE78_23560 ad12ccff8c8c07544da682b489477711 627 SMART SM00116 247 294 0.15 T 01-11-2018 IPR000644 CBS domain DOE78_23560 ad12ccff8c8c07544da682b489477711 627 Pfam PF00571 CBS domain 176 228 6.9E-13 T 01-11-2018 IPR000644 CBS domain DOE78_23560 ad12ccff8c8c07544da682b489477711 627 Pfam PF00571 CBS domain 240 292 2.9E-8 T 01-11-2018 IPR000644 CBS domain DOE78_23560 ad12ccff8c8c07544da682b489477711 627 Pfam PF03445 Putative nucleotidyltransferase DUF294 319 451 1.1E-35 T 01-11-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DOE78_23560 ad12ccff8c8c07544da682b489477711 627 Pfam PF00027 Cyclic nucleotide-binding domain 38 125 5.3E-7 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_23560 ad12ccff8c8c07544da682b489477711 627 SUPERFAMILY SSF54631 173 292 3.79E-31 T 01-11-2018 DOE78_23560 ad12ccff8c8c07544da682b489477711 627 SUPERFAMILY SSF51206 8 129 2.88E-16 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_23560 ad12ccff8c8c07544da682b489477711 627 Gene3D G3DSA:2.60.120.10 10 162 5.5E-15 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_23560 ad12ccff8c8c07544da682b489477711 627 Gene3D G3DSA:3.10.580.10 171 303 3.0E-35 T 01-11-2018 DOE78_10575 6b6962c9b6bea72f886ee89d6b4740c8 146 Gene3D G3DSA:3.40.630.30 2 137 5.9E-36 T 01-11-2018 DOE78_10575 6b6962c9b6bea72f886ee89d6b4740c8 146 SUPERFAMILY SSF55729 1 144 1.93E-31 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10575 6b6962c9b6bea72f886ee89d6b4740c8 146 Pfam PF00583 Acetyltransferase (GNAT) family 26 133 1.6E-17 T 01-11-2018 IPR000182 GNAT domain DOE78_09410 eb8cedd46b5370de1f354106fb5c8d8e 315 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 252 273 - T 01-11-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 DOE78_09410 eb8cedd46b5370de1f354106fb5c8d8e 315 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 274 8.3E-10 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_09410 eb8cedd46b5370de1f354106fb5c8d8e 315 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 119 9.8E-8 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_09410 eb8cedd46b5370de1f354106fb5c8d8e 315 Gene3D G3DSA:3.10.180.10 151 313 1.9E-35 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_09410 eb8cedd46b5370de1f354106fb5c8d8e 315 Gene3D G3DSA:3.10.180.10 3 135 1.7E-37 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_09410 eb8cedd46b5370de1f354106fb5c8d8e 315 SUPERFAMILY SSF54593 4 275 8.37E-37 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 PRINTS PR00116 Arginase signature 229 258 3.5E-13 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 PRINTS PR00116 Arginase signature 116 131 3.5E-13 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 SUPERFAMILY SSF52768 21 303 8.28E-94 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 ProSitePatterns PS01053 Arginase family signature. 232 253 - T 01-11-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 Pfam PF00491 Arginase family 30 300 1.0E-85 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 Gene3D G3DSA:3.40.800.10 2 308 2.7E-102 T 01-11-2018 DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 7.3E-63 T 01-11-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DOE78_14105 9b0a181902a43dbf90951e2d95e8c5bf 313 PIRSF PIRSF036979 8 307 7.5E-92 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_13850 89ed19a1e705dab5924e3d954e7b255d 648 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 68 235 1.0E-44 T 01-11-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain DOE78_13850 89ed19a1e705dab5924e3d954e7b255d 648 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 264 603 4.4E-85 T 01-11-2018 IPR003776 YcaO-like domain DOE78_13850 89ed19a1e705dab5924e3d954e7b255d 648 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 264 648 1.7E-127 T 01-11-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component DOE78_13850 89ed19a1e705dab5924e3d954e7b255d 648 Gene3D G3DSA:2.40.50.820 294 374 2.5E-43 T 01-11-2018 DOE78_13850 89ed19a1e705dab5924e3d954e7b255d 648 Gene3D G3DSA:1.10.490.140 272 604 2.5E-43 T 01-11-2018 DOE78_13850 89ed19a1e705dab5924e3d954e7b255d 648 Gene3D G3DSA:3.40.50.720 17 187 8.6E-24 T 01-11-2018 DOE78_13850 89ed19a1e705dab5924e3d954e7b255d 648 Gene3D G3DSA:3.30.160.660 411 551 2.5E-43 T 01-11-2018 DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 Gene3D G3DSA:3.40.190.290 91 298 1.6E-54 T 01-11-2018 DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 SUPERFAMILY SSF46785 1 84 4.54E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 Gene3D G3DSA:1.10.10.10 1 90 2.5E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.8E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 Pfam PF03466 LysR substrate binding domain 89 291 1.0E-48 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_12250 c033abe482a49daca8aa7b5c7386ea81 300 SUPERFAMILY SSF53850 88 296 7.56E-45 T 01-11-2018 DOE78_03470 befebf0e4fa2addb0518c60868847d33 393 Gene3D G3DSA:1.20.1250.20 203 388 1.6E-21 T 01-11-2018 DOE78_03470 befebf0e4fa2addb0518c60868847d33 393 Gene3D G3DSA:1.20.1250.20 3 187 2.2E-29 T 01-11-2018 DOE78_03470 befebf0e4fa2addb0518c60868847d33 393 Pfam PF07690 Major Facilitator Superfamily 13 186 3.6E-23 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_03470 befebf0e4fa2addb0518c60868847d33 393 Pfam PF07690 Major Facilitator Superfamily 216 385 2.1E-21 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_03470 befebf0e4fa2addb0518c60868847d33 393 SUPERFAMILY SSF103473 5 384 2.22E-53 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_09730 434fbcdfee8d6c11a4d8cc5bbfe065ec 274 Pfam PF11155 Domain of unknown function (DUF2935) 8 122 3.5E-18 T 01-11-2018 IPR021328 Protein of unknown function DUF2935 DOE78_09730 434fbcdfee8d6c11a4d8cc5bbfe065ec 274 Pfam PF11155 Domain of unknown function (DUF2935) 139 253 9.7E-14 T 01-11-2018 IPR021328 Protein of unknown function DUF2935 DOE78_09730 434fbcdfee8d6c11a4d8cc5bbfe065ec 274 Gene3D G3DSA:1.20.1260.120 3 273 4.0E-81 T 01-11-2018 DOE78_09730 434fbcdfee8d6c11a4d8cc5bbfe065ec 274 SUPERFAMILY SSF158430 133 256 6.41E-16 T 01-11-2018 DOE78_09730 434fbcdfee8d6c11a4d8cc5bbfe065ec 274 SUPERFAMILY SSF158430 8 133 3.14E-21 T 01-11-2018 DOE78_00815 784b3de162994c3afc014b2f261aeaa7 60 PIRSF PIRSF002211 1 60 3.0E-30 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00815 784b3de162994c3afc014b2f261aeaa7 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 01-11-2018 IPR018038 Ribosomal protein L30, conserved site DOE78_00815 784b3de162994c3afc014b2f261aeaa7 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 4.3E-22 T 01-11-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DOE78_00815 784b3de162994c3afc014b2f261aeaa7 60 Gene3D G3DSA:3.30.1390.20 1 59 2.7E-28 T 01-11-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DOE78_00815 784b3de162994c3afc014b2f261aeaa7 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 19.751 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00815 784b3de162994c3afc014b2f261aeaa7 60 SUPERFAMILY SSF55129 5 59 3.92E-21 T 01-11-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DOE78_00815 784b3de162994c3afc014b2f261aeaa7 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 4.5E-28 T 01-11-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.2E-7 T 01-11-2018 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 272 5.2E-7 T 01-11-2018 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 5.2E-7 T 01-11-2018 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 95 113 5.2E-7 T 01-11-2018 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 SUPERFAMILY SSF51905 145 300 1.71E-20 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 2.4E-33 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 SUPERFAMILY SSF51905 1 180 5.42E-22 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.0E-6 T 01-11-2018 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 272 3.0E-6 T 01-11-2018 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 167 3.0E-6 T 01-11-2018 DOE78_20995 50e05e9e65e4732c61e0734811c532d4 354 Gene3D G3DSA:3.50.50.100 1 353 8.6E-74 T 01-11-2018 DOE78_01930 29339b62b0e253f9603452bb0ebdb1e2 501 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 439 1.4E-106 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_01930 29339b62b0e253f9603452bb0ebdb1e2 501 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 421 441 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site DOE78_01930 29339b62b0e253f9603452bb0ebdb1e2 501 Pfam PF00474 Sodium:solute symporter family 33 439 4.1E-113 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_01930 29339b62b0e253f9603452bb0ebdb1e2 501 Gene3D G3DSA:1.20.1730.10 21 499 8.9E-104 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily DOE78_01930 29339b62b0e253f9603452bb0ebdb1e2 501 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 494 4.6E-223 T 01-11-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 5.3E-230 T 01-11-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 Gene3D G3DSA:3.10.20.580 449 555 3.0E-40 T 01-11-2018 DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 47.943 T 01-11-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 Gene3D G3DSA:3.40.50.10710 207 357 1.5E-190 T 01-11-2018 DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 SMART SM00849 21 215 1.6E-25 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 SUPERFAMILY SSF56281 11 423 2.44E-95 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 2.6E-15 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 Gene3D G3DSA:3.60.15.10 12 442 1.5E-190 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 PIRSF PIRSF004803 1 555 4.8E-246 T 01-11-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 360 407 5.6E-9 T 01-11-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DOE78_07315 751bb1a71359b3eb70d6c7523d4f055c 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 01-11-2018 IPR001587 Ribonuclease J, conserved site DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 SMART SM01091 355 431 1.8E-16 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 Gene3D G3DSA:3.30.465.10 349 431 2.4E-15 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 SUPERFAMILY SSF54631 211 350 9.1E-30 T 01-11-2018 DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 SUPERFAMILY SSF56176 352 430 1.09E-14 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 Pfam PF01595 Domain of unknown function DUF21 7 201 1.5E-49 T 01-11-2018 IPR002550 CNNM, transmembrane domain DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 Pfam PF00571 CBS domain 217 272 8.8E-5 T 01-11-2018 IPR000644 CBS domain DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 Pfam PF00571 CBS domain 291 339 3.5E-4 T 01-11-2018 IPR000644 CBS domain DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 Pfam PF03471 Transporter associated domain 356 430 2.7E-13 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_22320 3291b3c888a02f57ccdcf66107e67c77 431 Gene3D G3DSA:3.10.580.10 195 348 3.6E-51 T 01-11-2018 DOE78_03030 876cdef4d56d007d9d8c030ef8bedc2b 455 SUPERFAMILY SSF51126 84 410 2.32E-38 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor DOE78_03030 876cdef4d56d007d9d8c030ef8bedc2b 455 Gene3D G3DSA:2.160.20.10 77 448 1.8E-100 T 01-11-2018 IPR012334 Pectin lyase fold DOE78_03030 876cdef4d56d007d9d8c030ef8bedc2b 455 Pfam PF12708 Pectate lyase superfamily protein 85 317 2.6E-20 T 01-11-2018 IPR024535 Pectate lyase superfamily protein DOE78_14360 c0ea2a847456e5db46377fc63a45947f 97 Gene3D G3DSA:3.30.70.100 1 97 2.1E-28 T 01-11-2018 DOE78_14360 c0ea2a847456e5db46377fc63a45947f 97 SUPERFAMILY SSF54909 1 93 5.67E-28 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_14360 c0ea2a847456e5db46377fc63a45947f 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 5.7E-21 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 SUPERFAMILY SSF53686 3 300 6.55E-99 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 8 386 2.3E-155 T 01-11-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 Pfam PF13291 ACT domain 313 379 1.7E-6 T 01-11-2018 IPR002912 ACT domain DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 Gene3D G3DSA:3.40.50.1100 37 133 1.2E-121 T 01-11-2018 DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 290 3.1E-85 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 SUPERFAMILY SSF55021 315 381 4.96E-7 T 01-11-2018 DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 Gene3D G3DSA:3.30.70.260 312 386 4.7E-6 T 01-11-2018 DOE78_09440 5a4e4e6c5bf33236a7f76fbd53444934 389 Gene3D G3DSA:3.40.50.1100 2 295 1.2E-121 T 01-11-2018 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 SUPERFAMILY SSF53681 4 106 5.56E-37 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 01-11-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 Gene3D G3DSA:3.40.50.1860 5 253 1.8E-100 T 01-11-2018 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 214 2.0E-40 T 01-11-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 252 3.8E-90 T 01-11-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 Hamap MF_00258 Glutamate racemase [murI]. 3 255 41.311 T 01-11-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 SUPERFAMILY SSF53681 108 261 9.32E-41 T 01-11-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 Gene3D G3DSA:3.40.50.1860 94 206 1.8E-100 T 01-11-2018 DOE78_18190 1d95648f3a981221f090f664c17e7508 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 01-11-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 Gene3D G3DSA:3.20.20.450 451 699 1.3E-85 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 SMART SM00052 448 691 1.9E-97 T 01-11-2018 IPR001633 EAL domain DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 Pfam PF00563 EAL domain 455 686 1.2E-66 T 01-11-2018 IPR001633 EAL domain DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 SUPERFAMILY SSF55073 285 439 1.73E-20 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 280 423 2.4E-20 T 01-11-2018 IPR000160 GGDEF domain DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 SUPERFAMILY SSF141868 455 699 4.32E-79 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 Gene3D G3DSA:3.30.70.270 274 450 1.6E-23 T 01-11-2018 DOE78_09975 50a783940ee547eb2a5ac59bd6ba2184 705 SMART SM00267 269 438 5.0E-17 T 01-11-2018 IPR000160 GGDEF domain DOE78_02645 b39a7612531b9d6555bb4043862f5481 417 Pfam PF06134 L-rhamnose isomerase (RhaA) 1 417 5.8E-249 T 01-11-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DOE78_02645 b39a7612531b9d6555bb4043862f5481 417 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 7 417 0.0 T 01-11-2018 DOE78_02645 b39a7612531b9d6555bb4043862f5481 417 SUPERFAMILY SSF51658 2 417 1.45E-77 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_02645 b39a7612531b9d6555bb4043862f5481 417 Gene3D G3DSA:3.20.20.150 1 417 3.2E-193 T 01-11-2018 DOE78_02645 b39a7612531b9d6555bb4043862f5481 417 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 417 261.036 T 01-11-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DOE78_02645 b39a7612531b9d6555bb4043862f5481 417 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 3 417 6.8E-235 T 01-11-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DOE78_07685 47fa8715c9209aadf81a4f0cdc5c0c8a 117 Pfam PF04977 Septum formation initiator 41 116 4.1E-9 T 01-11-2018 IPR007060 Septum formation initiator FtsL/DivIC DOE78_07685 47fa8715c9209aadf81a4f0cdc5c0c8a 117 Hamap MF_00910 Cell division protein FtsL [ftsL]. 34 116 13.989 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DOE78_07685 47fa8715c9209aadf81a4f0cdc5c0c8a 117 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 34 116 1.1E-19 T 01-11-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DOE78_04330 ea878f3fe4ef7ba0f8fd049bd1a97fea 513 Pfam PF04616 Glycosyl hydrolases family 43 91 391 1.0E-49 T 01-11-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DOE78_04330 ea878f3fe4ef7ba0f8fd049bd1a97fea 513 Pfam PF16369 C-terminal of Glycosyl hydrolases family 43 395 506 4.1E-22 T 01-11-2018 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal DOE78_04330 ea878f3fe4ef7ba0f8fd049bd1a97fea 513 Gene3D G3DSA:2.40.128.10 408 513 2.9E-8 T 01-11-2018 DOE78_04330 ea878f3fe4ef7ba0f8fd049bd1a97fea 513 Gene3D G3DSA:2.115.10.20 92 407 3.2E-83 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_04330 ea878f3fe4ef7ba0f8fd049bd1a97fea 513 SUPERFAMILY SSF75005 91 400 1.7E-67 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 SMART SM00448 4 119 1.2E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 2 267 3.2E-130 T 01-11-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 157 260 2.7E-45 T 01-11-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 SUPERFAMILY SSF52172 2 127 1.14E-33 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 SUPERFAMILY SSF46894 151 265 1.53E-48 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 Gene3D G3DSA:3.40.50.2300 1 147 4.1E-33 T 01-11-2018 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 PIRSF PIRSF002937 1 267 1.3E-133 T 01-11-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 Pfam PF00072 Response regulator receiver domain 6 119 2.9E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 156 266 1.0E-58 T 01-11-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 DOE78_16815 99ef18e0333c6c8976c308e5b414bcaa 267 Gene3D G3DSA:1.10.10.10 148 267 3.8E-55 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_06555 d8a9aee8be61a540541dc2b408fb8ec5 346 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 309 3.7E-20 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_06555 d8a9aee8be61a540541dc2b408fb8ec5 346 SMART SM00382 42 242 7.0E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_06555 d8a9aee8be61a540541dc2b408fb8ec5 346 Gene3D G3DSA:3.40.50.300 11 343 2.9E-96 T 01-11-2018 DOE78_06555 d8a9aee8be61a540541dc2b408fb8ec5 346 Pfam PF00005 ABC transporter 33 192 1.1E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06555 d8a9aee8be61a540541dc2b408fb8ec5 346 SUPERFAMILY SSF52540 13 263 1.44E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06555 d8a9aee8be61a540541dc2b408fb8ec5 346 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 328 1.7E-25 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_06555 d8a9aee8be61a540541dc2b408fb8ec5 346 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 SUPERFAMILY SSF53323 1 220 1.18E-46 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 473 549 1.4E-10 T 01-11-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 Gene3D G3DSA:3.40.50.920 466 576 2.1E-29 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 SUPERFAMILY SSF52922 470 575 6.94E-24 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 Gene3D G3DSA:3.40.920.10 1 184 2.4E-28 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 SUPERFAMILY SSF52518 196 456 3.91E-73 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 Gene3D G3DSA:3.40.50.970 185 385 1.3E-76 T 01-11-2018 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 209 445 8.3E-63 T 01-11-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 572 6.7E-218 T 01-11-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 DOE78_08580 85a243b97859aa7e579c1374be7f1958 576 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 174 1.1E-40 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 SUPERFAMILY SSF51735 102 289 2.04E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 SUPERFAMILY SSF52283 2 136 8.69E-36 T 01-11-2018 DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 288 1.2E-64 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 01-11-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 Gene3D G3DSA:3.40.50.720 6 311 1.3E-124 T 01-11-2018 DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 2.1E-32 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DOE78_21460 d7f88798f451cd0f6f576a7e67d6821d 320 Gene3D G3DSA:3.40.50.720 100 287 1.3E-124 T 01-11-2018 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 SMART SM00878 337 443 6.2E-71 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 SUPERFAMILY SSF51246 332 443 1.94E-47 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 1.2E-43 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 448 1.4E-242 T 01-11-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 SUPERFAMILY SSF56059 83 349 3.36E-69 T 01-11-2018 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 Gene3D G3DSA:3.30.470.20 87 443 9.6E-158 T 01-11-2018 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 SUPERFAMILY SSF52440 1 113 7.05E-51 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 Gene3D G3DSA:3.30.1490.20 131 202 9.6E-158 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.7E-81 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 Gene3D G3DSA:3.40.50.20 2 85 3.8E-39 T 01-11-2018 DOE78_16875 cead42b20ca77601a8ccafcf2a333f82 452 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.1E-47 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_03330 5c335a8044cf1fa44d03e31ab1c56f89 316 SUPERFAMILY SSF81345 7 311 1.7E-59 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_03330 5c335a8044cf1fa44d03e31ab1c56f89 316 Pfam PF01032 FecCD transport family 35 311 5.8E-57 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_03330 5c335a8044cf1fa44d03e31ab1c56f89 316 Gene3D G3DSA:1.10.3470.10 5 316 1.3E-58 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_08040 ab3e79200f4f843ea5dcfc331028c461 105 Gene3D G3DSA:1.10.10.10 1 105 1.6E-37 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08040 ab3e79200f4f843ea5dcfc331028c461 105 SUPERFAMILY SSF88659 1 92 3.74E-34 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_08040 ab3e79200f4f843ea5dcfc331028c461 105 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 96 1.7E-41 T 01-11-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like DOE78_08040 ab3e79200f4f843ea5dcfc331028c461 105 Hamap MF_00245 UPF0122 protein . 2 105 21.91 T 01-11-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Gene3D G3DSA:3.40.50.1000 481 750 7.8E-94 T 01-11-2018 IPR023214 HAD superfamily DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 SUPERFAMILY SSF81665 265 494 4.97E-12 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 1.6E-28 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 348 362 1.6E-28 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 634 1.6E-28 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 733 1.6E-28 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 698 717 1.6E-28 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 655 1.6E-28 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 214 239 1.3E-15 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 33 56 1.3E-15 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00942 Copper-transporting ATPase 1 signature 7 32 1.3E-15 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Pfam PF00122 E1-E2 ATPase 299 479 5.9E-58 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Pfam PF00403 Heavy-metal-associated domain 78 137 2.6E-14 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Pfam PF00403 Heavy-metal-associated domain 10 70 4.4E-16 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 SUPERFAMILY SSF55008 4 72 6.81E-20 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Gene3D G3DSA:3.40.1110.10 511 630 7.8E-94 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 SUPERFAMILY SSF55008 74 145 1.11E-21 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 231 800 4.9E-199 T 01-11-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 712 9.4E-45 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 271 782 2.9E-91 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 SUPERFAMILY SSF81653 302 398 1.44E-30 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00943 Copper-transporting ATPase signature 268 287 3.1E-17 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00943 Copper-transporting ATPase signature 421 435 3.1E-17 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00943 Copper-transporting ATPase signature 216 235 3.1E-17 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00943 Copper-transporting ATPase signature 483 498 3.1E-17 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00943 Copper-transporting ATPase signature 288 306 3.1E-17 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00943 Copper-transporting ATPase signature 119 139 3.1E-17 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 PRINTS PR00943 Copper-transporting ATPase signature 675 692 3.1E-17 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 212 801 7.3E-185 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 75 138 9.9E-13 T 01-11-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 71 4.9E-13 T 01-11-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Gene3D G3DSA:2.70.150.20 291 403 8.0E-44 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 502 508 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Gene3D G3DSA:3.30.70.100 74 151 1.1E-23 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 Gene3D G3DSA:3.30.70.100 4 73 1.3E-21 T 01-11-2018 DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 SUPERFAMILY SSF56784 498 798 1.26E-60 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_21380 b0b9c8805936e354296bd01ce080ab38 805 ProSitePatterns PS01047 Heavy-metal-associated domain. 80 109 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DOE78_11700 cd77648106dfa251993f9151d8483c02 267 SUPERFAMILY SSF82771 172 254 1.57E-8 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DOE78_11700 cd77648106dfa251993f9151d8483c02 267 Pfam PF01541 GIY-YIG catalytic domain 172 253 3.9E-7 T 01-11-2018 IPR000305 GIY-YIG endonuclease DOE78_16010 a018225a4add4833162933fb0e2fff93 255 Gene3D G3DSA:1.10.760.10 182 253 1.5E-16 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_16010 a018225a4add4833162933fb0e2fff93 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 182 249 3.5E-12 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_16010 a018225a4add4833162933fb0e2fff93 255 SUPERFAMILY SSF46626 142 252 6.45E-14 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_16010 a018225a4add4833162933fb0e2fff93 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 160 2.8E-9 T 01-11-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DOE78_16010 a018225a4add4833162933fb0e2fff93 255 SUPERFAMILY SSF81648 21 161 1.7E-30 T 01-11-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DOE78_16010 a018225a4add4833162933fb0e2fff93 255 PIRSF PIRSF036636 1 255 7.0E-143 T 01-11-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 DOE78_16010 a018225a4add4833162933fb0e2fff93 255 Gene3D G3DSA:1.20.810.10 13 177 3.8E-26 T 01-11-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DOE78_09660 34c017407f6f077921068fa09825e81e 325 PRINTS PR01713 Nucleotide sugar epimerase signature 281 298 9.3E-5 T 01-11-2018 DOE78_09660 34c017407f6f077921068fa09825e81e 325 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 9.3E-5 T 01-11-2018 DOE78_09660 34c017407f6f077921068fa09825e81e 325 PRINTS PR01713 Nucleotide sugar epimerase signature 236 251 9.3E-5 T 01-11-2018 DOE78_09660 34c017407f6f077921068fa09825e81e 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 242 9.6E-60 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_09660 34c017407f6f077921068fa09825e81e 325 Gene3D G3DSA:3.40.50.720 1 324 6.7E-106 T 01-11-2018 DOE78_09660 34c017407f6f077921068fa09825e81e 325 SUPERFAMILY SSF51735 1 316 9.11E-87 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SMART SM00091 246 312 3.9E-6 T 01-11-2018 IPR000014 PAS domain DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 586 3.5E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Gene3D G3DSA:3.30.565.10 430 586 2.7E-49 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SMART SM00388 362 429 2.2E-23 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 428 4.8E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 1.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 1.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 1.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 1.3E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SMART SM00387 475 587 2.5E-41 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SMART SM00304 187 239 2.1E-4 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Gene3D G3DSA:1.10.287.130 360 429 1.1E-26 T 01-11-2018 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SUPERFAMILY SSF47384 349 429 3.73E-21 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SUPERFAMILY SSF55874 418 583 5.5E-50 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SUPERFAMILY SSF55785 242 354 1.18E-9 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 SUPERFAMILY SSF158472 189 238 9.68E-8 T 01-11-2018 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Pfam PF00989 PAS fold 250 353 3.3E-10 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Gene3D G3DSA:1.20.1480.50 148 244 6.0E-12 T 01-11-2018 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 362 3.9E-7 T 01-11-2018 IPR000014 PAS domain DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Gene3D G3DSA:3.30.450.20 257 359 3.5E-11 T 01-11-2018 DOE78_18430 bcac1acb69267df46d282ddfcc75706a 589 Pfam PF16736 Single Cache-like 34 151 4.5E-22 T 01-11-2018 IPR031967 PhoR, single Cache-like domain DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 Pfam PF00682 HMGL-like 32 307 4.1E-68 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 SUPERFAMILY SSF89000 388 438 7.45E-13 T 01-11-2018 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 240 253 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 1 552 51.024 T 01-11-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 SUPERFAMILY SSF110921 451 550 2.75E-25 T 01-11-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 Gene3D G3DSA:3.30.160.270 377 549 1.5E-46 T 01-11-2018 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 Pfam PF08502 LeuA allosteric (dimerisation) domain 426 550 7.5E-20 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 SUPERFAMILY SSF51569 23 327 6.04E-93 T 01-11-2018 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 Gene3D G3DSA:3.20.20.70 12 374 4.8E-138 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12405 87646bbb303b4512dd956c6f5661686d 563 SMART SM00917 422 551 5.7E-20 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_03270 e10c8e7c77878ae1c8acadec477dd56b 330 SUPERFAMILY SSF51735 2 152 1.5E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_03270 e10c8e7c77878ae1c8acadec477dd56b 330 Gene3D G3DSA:3.30.360.10 134 327 1.5E-64 T 01-11-2018 DOE78_03270 e10c8e7c77878ae1c8acadec477dd56b 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.0E-25 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_03270 e10c8e7c77878ae1c8acadec477dd56b 330 SUPERFAMILY SSF55347 127 291 1.96E-28 T 01-11-2018 DOE78_03270 e10c8e7c77878ae1c8acadec477dd56b 330 Gene3D G3DSA:3.40.50.720 1 133 1.0E-37 T 01-11-2018 DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 SUPERFAMILY SSF52743 158 618 5.76E-69 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 PRINTS PR00723 Subtilisin serine protease family (S8) signature 235 248 1.8E-17 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 PRINTS PR00723 Subtilisin serine protease family (S8) signature 176 195 1.8E-17 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 PRINTS PR00723 Subtilisin serine protease family (S8) signature 548 564 1.8E-17 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 181 192 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 549 559 - T 01-11-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 Pfam PF02225 PA domain 411 485 4.6E-15 T 01-11-2018 IPR003137 PA domain DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 239 249 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 SUPERFAMILY SSF52025 414 498 4.45E-11 T 01-11-2018 DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 Gene3D G3DSA:3.50.30.30 365 549 1.2E-104 T 01-11-2018 DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 Gene3D G3DSA:2.60.40.10 619 696 2.0E-7 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 Gene3D G3DSA:3.40.50.200 176 614 1.2E-104 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_24345 869f300c92020453ea241a8b8abb6e65 729 Pfam PF00082 Subtilase family 176 591 8.7E-54 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 Pfam PF11870 Domain of unknown function (DUF3390) 384 470 2.6E-22 T 01-11-2018 IPR024569 4Fe-4S binding protein, C-terminal DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 Pfam PF02589 LUD domain 70 295 2.3E-56 T 01-11-2018 IPR003741 LUD domain DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 475 66.877 T 01-11-2018 IPR022825 Lactate utilization protein B DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 2.1E-209 T 01-11-2018 IPR004452 4Fe-4S binding protein GO:0019516 DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 SUPERFAMILY SSF46548 279 393 1.24E-17 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 Gene3D G3DSA:3.40.50.10420 121 295 3.4E-13 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 Pfam PF13183 4Fe-4S dicluster domain 311 377 5.2E-11 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_06360 e19973c55e6b8588c7ae2fcf02476582 476 SUPERFAMILY SSF100950 65 296 1.0E-39 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 SMART SM00304 155 207 5.9E-13 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 208 272 2.7E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 4.8E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 4.8E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 4.8E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 4.8E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 Gene3D G3DSA:3.30.565.10 278 429 2.3E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 SUPERFAMILY SSF55874 264 427 2.62E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 SMART SM00388 208 274 2.5E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 SUPERFAMILY SSF47384 191 274 2.35E-18 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 Gene3D G3DSA:1.10.8.500 153 203 9.7E-13 T 01-11-2018 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 428 2.5E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 Pfam PF00672 HAMP domain 155 202 1.2E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 SUPERFAMILY SSF158472 155 203 1.96E-12 T 01-11-2018 DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 SMART SM00387 318 429 3.7E-36 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02660 a90298954ffa2f0cb6f3c1835bf85115 429 Gene3D G3DSA:1.10.287.130 204 274 2.8E-21 T 01-11-2018 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 Pfam PF14520 Helix-hairpin-helix domain 71 128 2.3E-15 T 01-11-2018 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 SUPERFAMILY SSF47781 65 135 1.2E-19 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 Gene3D G3DSA:2.40.50.140 1 64 5.3E-18 T 01-11-2018 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 Pfam PF07499 RuvA, C-terminal domain 158 201 7.4E-13 T 01-11-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 SUPERFAMILY SSF50249 1 62 4.8E-16 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 Pfam PF01330 RuvA N terminal domain 1 61 1.6E-20 T 01-11-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 SUPERFAMILY SSF46929 158 201 5.49E-10 T 01-11-2018 IPR036267 RuvA, C-terminal domain superfamily DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 Gene3D G3DSA:1.10.8.10 154 201 8.3E-7 T 01-11-2018 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 2 202 6.4E-61 T 01-11-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 Gene3D G3DSA:1.10.150.20 65 136 3.7E-24 T 01-11-2018 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 202 30.196 T 01-11-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 SMART SM00278 72 91 0.39 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_17855 a9f537a72e8c09be17eee31e7b6b60ad 203 SMART SM00278 107 126 4.8 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_23435 2979ca8e82f126314fd85b949ce50b3c 342 Gene3D G3DSA:3.40.50.720 7 317 2.5E-89 T 01-11-2018 DOE78_23435 2979ca8e82f126314fd85b949ce50b3c 342 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 2.3E-32 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_23435 2979ca8e82f126314fd85b949ce50b3c 342 SUPERFAMILY SSF55347 125 308 9.42E-23 T 01-11-2018 DOE78_23435 2979ca8e82f126314fd85b949ce50b3c 342 Gene3D G3DSA:3.30.360.10 128 337 2.5E-89 T 01-11-2018 DOE78_23435 2979ca8e82f126314fd85b949ce50b3c 342 SUPERFAMILY SSF51735 3 148 7.74E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_23435 2979ca8e82f126314fd85b949ce50b3c 342 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 129 197 2.1E-7 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_00460 9030095aecba34555c6bbdce7cfcdb38 71 Gene3D G3DSA:1.10.260.40 2 71 3.6E-18 T 01-11-2018 DOE78_00460 9030095aecba34555c6bbdce7cfcdb38 71 Pfam PF01381 Helix-turn-helix 10 64 3.7E-14 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_00460 9030095aecba34555c6bbdce7cfcdb38 71 SMART SM00530 9 64 4.6E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_00460 9030095aecba34555c6bbdce7cfcdb38 71 SUPERFAMILY SSF47413 4 68 8.7E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 2.1E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 Gene3D G3DSA:3.40.50.12740 3 212 1.6E-74 T 01-11-2018 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 6.3E-16 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 6.3E-16 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 6.3E-16 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 SUPERFAMILY SSF52172 2 130 5.41E-38 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 SMART SM00421 149 206 1.2E-26 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 Pfam PF00072 Response regulator receiver domain 5 116 8.6E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 SUPERFAMILY SSF46894 137 212 5.78E-22 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 SMART SM00448 3 116 3.6E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_16905 2dceda5aff28d92ae6d04b7129037beb 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_21500 34bc6af4799f713bfcbe5da609ecd576 396 PIRSF PIRSF038994 7 395 1.2E-135 T 01-11-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DOE78_21500 34bc6af4799f713bfcbe5da609ecd576 396 Pfam PF01979 Amidohydrolase family 60 389 8.2E-35 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_21500 34bc6af4799f713bfcbe5da609ecd576 396 SUPERFAMILY SSF51556 63 362 1.81E-102 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_21500 34bc6af4799f713bfcbe5da609ecd576 396 Gene3D G3DSA:3.20.20.140 63 362 1.5E-148 T 01-11-2018 DOE78_21500 34bc6af4799f713bfcbe5da609ecd576 396 SUPERFAMILY SSF51338 8 395 2.23E-14 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_21500 34bc6af4799f713bfcbe5da609ecd576 396 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 8 388 3.5E-123 T 01-11-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DOE78_21500 34bc6af4799f713bfcbe5da609ecd576 396 Gene3D G3DSA:2.30.40.10 15 390 1.5E-148 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 Pfam PF01546 Peptidase family M20/M25/M40 82 354 1.7E-6 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 Gene3D G3DSA:3.30.70.360 164 281 4.7E-132 T 01-11-2018 DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 Gene3D G3DSA:3.40.630.10 17 358 4.7E-132 T 01-11-2018 DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 350 1.0E-66 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 PIRSF PIRSF037226 1 390 2.8E-160 T 01-11-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 SUPERFAMILY SSF55031 166 271 3.27E-22 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 Pfam PF07687 Peptidase dimerisation domain 173 256 2.1E-9 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_04650 91256f8b55adfd59241f5e75f0b7f392 390 SUPERFAMILY SSF53187 4 373 7.73E-59 T 01-11-2018 DOE78_24680 8c0a970f73ea245f4cbe9a93f520d585 285 Gene3D G3DSA:3.90.1530.30 39 101 7.5E-26 T 01-11-2018 DOE78_24680 8c0a970f73ea245f4cbe9a93f520d585 285 Pfam PF02195 ParB-like nuclease domain 28 114 3.0E-27 T 01-11-2018 IPR003115 ParB/Sulfiredoxin DOE78_24680 8c0a970f73ea245f4cbe9a93f520d585 285 Gene3D G3DSA:1.10.10.2830 102 225 1.2E-38 T 01-11-2018 DOE78_24680 8c0a970f73ea245f4cbe9a93f520d585 285 SUPERFAMILY SSF110849 26 117 5.23E-28 T 01-11-2018 IPR036086 ParB/Sulfiredoxin superfamily DOE78_24680 8c0a970f73ea245f4cbe9a93f520d585 285 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 197 1.1E-64 T 01-11-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DOE78_24680 8c0a970f73ea245f4cbe9a93f520d585 285 SMART SM00470 26 115 4.5E-34 T 01-11-2018 IPR003115 ParB/Sulfiredoxin DOE78_24680 8c0a970f73ea245f4cbe9a93f520d585 285 SUPERFAMILY SSF109709 107 218 9.42E-36 T 01-11-2018 DOE78_14595 de1c9884381ad3f44afee676eba7192f 287 Gene3D G3DSA:3.10.490.10 128 287 2.8E-59 T 01-11-2018 DOE78_14595 de1c9884381ad3f44afee676eba7192f 287 SUPERFAMILY SSF110857 4 130 3.53E-28 T 01-11-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DOE78_14595 de1c9884381ad3f44afee676eba7192f 287 Pfam PF13772 AIG2-like family 194 274 1.8E-6 T 01-11-2018 DOE78_14595 de1c9884381ad3f44afee676eba7192f 287 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 6 123 2.3E-24 T 01-11-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like DOE78_14595 de1c9884381ad3f44afee676eba7192f 287 SUPERFAMILY SSF110857 135 263 7.19E-18 T 01-11-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DOE78_14595 de1c9884381ad3f44afee676eba7192f 287 Gene3D G3DSA:3.10.490.10 4 126 1.9E-32 T 01-11-2018 DOE78_20935 a2ec03f518b68f88a73077a86a65f1bc 437 Pfam PF13726 Na+-H+ antiporter family 2 88 3.2E-35 T 01-11-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal DOE78_20935 a2ec03f518b68f88a73077a86a65f1bc 437 Pfam PF03553 Na+/H+ antiporter family 150 431 1.0E-72 T 01-11-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 284 40.044 T 01-11-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 Gene3D G3DSA:1.10.8.10 4 85 1.9E-14 T 01-11-2018 DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 Pfam PF05175 Methyltransferase small domain 114 193 7.6E-14 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 SUPERFAMILY SSF53335 5 282 1.41E-47 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 5 282 4.6E-68 T 01-11-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 Gene3D G3DSA:3.40.50.150 86 284 3.4E-60 T 01-11-2018 DOE78_23785 ffba37d8077c4089616cb3b092f55628 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 280 8.4E-81 T 01-11-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 Gene3D G3DSA:3.90.230.10 1 248 2.0E-110 T 01-11-2018 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 43.774 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 8.3E-24 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 8.3E-24 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 8.3E-24 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 8.3E-24 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 Pfam PF00557 Metallopeptidase family M24 12 239 2.2E-58 T 01-11-2018 IPR000994 Peptidase M24 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 9.2E-105 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_00835 504baed717ff337ab3e9c6335475964c 248 SUPERFAMILY SSF55920 1 247 7.72E-94 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like DOE78_19330 6bba3e9952912fcbc4ac7d16b1dde6ba 187 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 187 20.545 T 01-11-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DOE78_19330 6bba3e9952912fcbc4ac7d16b1dde6ba 187 Gene3D G3DSA:3.90.1140.10 6 187 2.5E-37 T 01-11-2018 DOE78_19330 6bba3e9952912fcbc4ac7d16b1dde6ba 187 Pfam PF02834 LigT like Phosphoesterase 25 95 7.4E-12 T 01-11-2018 IPR014051 Phosphoesterase, HXTX DOE78_19330 6bba3e9952912fcbc4ac7d16b1dde6ba 187 Pfam PF02834 LigT like Phosphoesterase 104 177 3.9E-8 T 01-11-2018 IPR014051 Phosphoesterase, HXTX DOE78_19330 6bba3e9952912fcbc4ac7d16b1dde6ba 187 SUPERFAMILY SSF55144 6 187 2.44E-36 T 01-11-2018 IPR009097 Cyclic phosphodiesterase DOE78_19330 6bba3e9952912fcbc4ac7d16b1dde6ba 187 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 187 4.6E-41 T 01-11-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 SUPERFAMILY SSF50156 119 210 1.67E-19 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 Pfam PF03572 Peptidase family S41 227 388 3.5E-49 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 Gene3D G3DSA:2.30.42.10 128 215 4.3E-90 T 01-11-2018 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 SMART SM00245 201 389 2.2E-63 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 SMART SM00228 128 199 2.3E-18 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 Gene3D G3DSA:3.90.226.10 216 386 4.3E-90 T 01-11-2018 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 SUPERFAMILY SSF52096 67 395 3.48E-70 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_15340 73d1e6931b968091b2dad800811404b4 494 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 81 398 1.8E-112 T 01-11-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 Pfam PF01471 Putative peptidoglycan binding domain 412 458 2.7E-13 T 01-11-2018 IPR002477 Peptidoglycan binding-like DOE78_15340 73d1e6931b968091b2dad800811404b4 494 Gene3D G3DSA:3.30.750.44 75 364 4.3E-90 T 01-11-2018 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 Gene3D G3DSA:1.10.101.10 399 476 1.8E-13 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 Pfam PF13180 PDZ domain 129 205 1.6E-13 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_15340 73d1e6931b968091b2dad800811404b4 494 SUPERFAMILY SSF47090 404 466 2.35E-13 T 01-11-2018 IPR036365 PGBD-like superfamily DOE78_15645 ed2f521873bea6a4673afd485ae00475 164 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 13 161 4.4E-57 T 01-11-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DOE78_15645 ed2f521873bea6a4673afd485ae00475 164 Gene3D G3DSA:1.10.3330.10 2 164 1.7E-57 T 01-11-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DOE78_15645 ed2f521873bea6a4673afd485ae00475 164 SUPERFAMILY SSF158694 3 162 4.19E-49 T 01-11-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DOE78_15645 ed2f521873bea6a4673afd485ae00475 164 Pfam PF09349 OHCU decarboxylase 10 160 1.2E-41 T 01-11-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 233 315 2.7E-17 T 01-11-2018 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 Pfam PF12838 4Fe-4S dicluster domain 255 309 1.2E-8 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 21 192 5.5E-28 T 01-11-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 Gene3D G3DSA:3.30.70.3270 241 329 2.4E-12 T 01-11-2018 DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 SUPERFAMILY SSF54862 246 317 1.26E-17 T 01-11-2018 DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 SUPERFAMILY SSF53323 12 196 5.1E-35 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 13 196 2.7E-33 T 01-11-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 295 306 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 256 267 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_06985 5e8994957a2fa0993625d17ce74eac93 336 Gene3D G3DSA:3.40.920.10 11 198 2.6E-50 T 01-11-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DOE78_00795 80bbbbc27b2a2c55abf6c7b7cb7e6c58 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00795 80bbbbc27b2a2c55abf6c7b7cb7e6c58 132 Gene3D G3DSA:3.30.1490.10 75 132 1.8E-26 T 01-11-2018 DOE78_00795 80bbbbc27b2a2c55abf6c7b7cb7e6c58 132 Gene3D G3DSA:3.30.1370.30 4 74 1.5E-32 T 01-11-2018 DOE78_00795 80bbbbc27b2a2c55abf6c7b7cb7e6c58 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.622 T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00795 80bbbbc27b2a2c55abf6c7b7cb7e6c58 132 Pfam PF00410 Ribosomal protein S8 5 132 1.3E-53 T 01-11-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00795 80bbbbc27b2a2c55abf6c7b7cb7e6c58 132 SUPERFAMILY SSF56047 2 132 1.02E-48 T 01-11-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_21360 a0eb3889ec944d063dc76ee5b7f966f4 221 SUPERFAMILY SSF161098 13 207 1.44E-42 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21360 a0eb3889ec944d063dc76ee5b7f966f4 221 Gene3D G3DSA:1.10.3720.10 13 221 7.7E-48 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21360 a0eb3889ec944d063dc76ee5b7f966f4 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 221 6.5E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 SUPERFAMILY SSF55048 128 193 6.28E-15 T 01-11-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 PIRSF PIRSF000446 1 311 1.0E-119 T 01-11-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 Gene3D G3DSA:3.40.366.10 5 287 3.3E-95 T 01-11-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 4.1E-113 T 01-11-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 Pfam PF00698 Acyl transferase domain 7 292 3.5E-40 T 01-11-2018 IPR014043 Acyl transferase DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 Gene3D G3DSA:3.30.70.250 127 197 3.3E-95 T 01-11-2018 DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 1.8E-41 T 01-11-2018 IPR020801 Polyketide synthase, acyl transferase domain DOE78_08010 6dd3a9a5f2bf4c7104074fc707314e36 315 SUPERFAMILY SSF52151 4 309 1.94E-76 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 183 205 1.9E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 225 245 1.9E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 351 362 1.9E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 103 117 1.9E-30 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 SUPERFAMILY SSF51735 192 424 2.63E-78 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 Gene3D G3DSA:1.10.8.1210 19 353 9.6E-146 T 01-11-2018 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 Gene3D G3DSA:3.40.50.10860 44 198 9.6E-146 T 01-11-2018 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 111 124 - T 01-11-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 SMART SM00839 194 423 8.4E-96 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 192 423 6.7E-79 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 46 174 4.5E-54 T 01-11-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 Gene3D G3DSA:3.40.50.720 199 352 9.6E-146 T 01-11-2018 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 PIRSF PIRSF000185 11 425 4.7E-173 T 01-11-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 SUPERFAMILY SSF53223 17 194 1.28E-65 T 01-11-2018 DOE78_16215 98f4836fb16b706f3bc3c70aa28a4eeb 425 Gene3D G3DSA:1.10.8.1210 379 425 1.3E-18 T 01-11-2018 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Gene3D G3DSA:1.10.8.60 456 524 3.1E-18 T 01-11-2018 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Gene3D G3DSA:1.10.10.60 525 586 8.9E-15 T 01-11-2018 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 SUPERFAMILY SSF46689 496 586 8.51E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 SUPERFAMILY SSF159800 2 182 8.89E-56 T 01-11-2018 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Gene3D G3DSA:3.40.50.10660 75 164 1.8E-64 T 01-11-2018 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Gene3D G3DSA:3.40.50.300 307 455 3.9E-34 T 01-11-2018 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Gene3D G3DSA:3.40.50.2300 4 179 1.8E-64 T 01-11-2018 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 SUPERFAMILY SSF52540 310 526 2.59E-32 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Pfam PF14532 Sigma-54 interaction domain 310 454 1.6E-18 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Pfam PF02954 Bacterial regulatory protein, Fis family 545 586 1.4E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 552 569 3.1E-6 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 569 586 3.1E-6 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_02085 c83423f232d0eb2ec3d60a45e819e904 586 Pfam PF06506 Propionate catabolism activator 23 183 8.7E-57 T 01-11-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 DOE78_19975 2eadebad81f0d81cf2268f1079ea0598 158 Gene3D G3DSA:3.40.930.10 3 157 5.9E-49 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_19975 2eadebad81f0d81cf2268f1079ea0598 158 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 151 1.2E-37 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_19975 2eadebad81f0d81cf2268f1079ea0598 158 SUPERFAMILY SSF55804 7 151 5.36E-40 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 3 290 5.5E-93 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 SUPERFAMILY SSF53671 3 291 1.83E-88 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 1.5E-22 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 243 252 1.5E-22 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 278 1.5E-22 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 1.5E-22 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 292 37.866 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 140 2.0E-38 T 01-11-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 Gene3D G3DSA:3.40.50.1370 6 286 1.2E-93 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 Gene3D G3DSA:3.40.50.1370 127 269 1.2E-93 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 285 1.2E-32 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.2E-32 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 247 252 1.2E-32 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.2E-32 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.2E-32 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 208 217 1.2E-32 T 01-11-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07840 e717b600f1622870c678dd4314cdd893 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 286 7.5E-21 T 01-11-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DOE78_21255 e5d53e57412df69995af87e44b50f457 390 Pfam PF01098 Cell cycle protein 14 382 7.8E-93 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_21255 e5d53e57412df69995af87e44b50f457 390 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 01-11-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 Gene3D G3DSA:3.60.20.40 355 535 2.8E-65 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 Gene3D G3DSA:1.10.246.130 250 354 6.7E-24 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 111 129 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 148 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 424 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 433 450 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 354 372 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 234 250 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 263 282 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 42 67 9.4E-43 T 01-11-2018 DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 SUPERFAMILY SSF56235 3 534 2.89E-176 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_23585 46c4ae5a35f10d6af5d00d270f7e2501 535 Pfam PF01019 Gamma-glutamyltranspeptidase 35 530 2.8E-157 T 01-11-2018 DOE78_07720 ebf4c03ef234ddb620002b44d8d39f4a 368 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 143 4.9E-48 T 01-11-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07720 ebf4c03ef234ddb620002b44d8d39f4a 368 Gene3D G3DSA:3.40.50.2000 178 346 1.1E-50 T 01-11-2018 DOE78_07720 ebf4c03ef234ddb620002b44d8d39f4a 368 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 34.793 T 01-11-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07720 ebf4c03ef234ddb620002b44d8d39f4a 368 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 354 2.9E-44 T 01-11-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DOE78_07720 ebf4c03ef234ddb620002b44d8d39f4a 368 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 356 5.1E-106 T 01-11-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07720 ebf4c03ef234ddb620002b44d8d39f4a 368 Gene3D G3DSA:3.40.50.2000 1 177 5.1E-62 T 01-11-2018 DOE78_07720 ebf4c03ef234ddb620002b44d8d39f4a 368 SUPERFAMILY SSF53756 2 363 4.04E-111 T 01-11-2018 DOE78_15090 463470467ad3a48707d626665142f557 625 Gene3D G3DSA:3.40.930.10 1 151 3.5E-48 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_15090 463470467ad3a48707d626665142f557 625 SUPERFAMILY SSF52794 167 267 3.31E-36 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_15090 463470467ad3a48707d626665142f557 625 Pfam PF02378 Phosphotransferase system, EIIC 296 566 1.8E-15 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_15090 463470467ad3a48707d626665142f557 625 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_15090 463470467ad3a48707d626665142f557 625 Gene3D G3DSA:3.40.50.2300 155 267 4.9E-41 T 01-11-2018 DOE78_15090 463470467ad3a48707d626665142f557 625 SUPERFAMILY SSF55804 1 148 2.35E-43 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_15090 463470467ad3a48707d626665142f557 625 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 168 250 1.9E-29 T 01-11-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DOE78_15090 463470467ad3a48707d626665142f557 625 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 284 620 1.3E-132 T 01-11-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DOE78_15090 463470467ad3a48707d626665142f557 625 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 169 258 5.6E-15 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_15090 463470467ad3a48707d626665142f557 625 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 1.6E-40 T 01-11-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DOE78_15090 463470467ad3a48707d626665142f557 625 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 7.9E-42 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_15900 7629724dff7d09fbc45693091a974302 222 SMART SM00525 188 208 0.0014 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DOE78_15900 7629724dff7d09fbc45693091a974302 222 Gene3D G3DSA:1.10.1670.10 16 205 1.2E-80 T 01-11-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DOE78_15900 7629724dff7d09fbc45693091a974302 222 SUPERFAMILY SSF48150 1 210 2.36E-72 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DOE78_15900 7629724dff7d09fbc45693091a974302 222 Hamap MF_00942 Endonuclease III [nth]. 1 211 38.779 T 01-11-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DOE78_15900 7629724dff7d09fbc45693091a974302 222 Gene3D G3DSA:1.10.340.30 22 133 1.2E-80 T 01-11-2018 DOE78_15900 7629724dff7d09fbc45693091a974302 222 TIGRFAM TIGR01083 nth: endonuclease III 5 196 1.3E-86 T 01-11-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DOE78_15900 7629724dff7d09fbc45693091a974302 222 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 01-11-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DOE78_15900 7629724dff7d09fbc45693091a974302 222 PIRSF PIRSF001435 1 213 2.3E-55 T 01-11-2018 DOE78_15900 7629724dff7d09fbc45693091a974302 222 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 170 3.4E-23 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_15900 7629724dff7d09fbc45693091a974302 222 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 1.3E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DOE78_15900 7629724dff7d09fbc45693091a974302 222 Pfam PF00633 Helix-hairpin-helix motif 100 128 8.4E-9 T 01-11-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DOE78_15900 7629724dff7d09fbc45693091a974302 222 SMART SM00478 39 187 1.3E-65 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_08380 456c23c2b59e3e7a974046e65b61130e 90 Pfam PF04296 Protein of unknown function (DUF448) 10 82 1.7E-26 T 01-11-2018 IPR007393 Domain of unknown function DUF448 DOE78_08380 456c23c2b59e3e7a974046e65b61130e 90 SUPERFAMILY SSF64376 5 88 1.22E-27 T 01-11-2018 IPR035931 YlxR-like superfamily DOE78_08380 456c23c2b59e3e7a974046e65b61130e 90 Gene3D G3DSA:3.30.1230.10 2 90 3.8E-34 T 01-11-2018 IPR035931 YlxR-like superfamily DOE78_24185 2b4cd009a1853068374c90d437d1e61b 264 SUPERFAMILY SSF56112 38 212 1.22E-5 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_24185 2b4cd009a1853068374c90d437d1e61b 264 Pfam PF00454 Phosphatidylinositol 3- and 4-kinase 70 178 6.2E-8 T 01-11-2018 IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Gene3D G3DSA:2.20.25.90 2 61 1.8E-11 T 01-11-2018 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Gene3D G3DSA:3.40.50.740 69 465 2.2E-133 T 01-11-2018 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Pfam PF01568 Molydopterin dinucleotide binding domain 558 650 8.5E-11 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 SUPERFAMILY SSF50692 549 669 2.94E-26 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Gene3D G3DSA:3.40.228.10 133 526 2.2E-133 T 01-11-2018 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 404 421 - T 01-11-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 SMART SM00926 2 57 4.4E-17 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 3 56 3.8E-16 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Gene3D G3DSA:2.40.40.20 540 674 8.9E-24 T 01-11-2018 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Gene3D G3DSA:3.30.2070.10 419 506 2.2E-133 T 01-11-2018 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 SUPERFAMILY SSF53706 5 575 2.36E-143 T 01-11-2018 DOE78_24655 d3792d68b885169fb52c3fde4ed79ed2 674 Pfam PF00384 Molybdopterin oxidoreductase 60 460 8.9E-59 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_12840 b7219a49aaa50b6236c5a9949578a6fc 178 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 3 178 2.3E-55 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DOE78_12840 b7219a49aaa50b6236c5a9949578a6fc 178 SUPERFAMILY SSF52540 2 178 2.92E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12840 b7219a49aaa50b6236c5a9949578a6fc 178 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 4 178 1.2E-60 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DOE78_12840 b7219a49aaa50b6236c5a9949578a6fc 178 Gene3D G3DSA:3.40.50.300 1 178 3.8E-63 T 01-11-2018 DOE78_12840 b7219a49aaa50b6236c5a9949578a6fc 178 PIRSF PIRSF015617 1 178 7.0E-63 T 01-11-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 PRINTS PR01806 Virulence factor MviN signature 129 153 1.2E-23 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 PRINTS PR01806 Virulence factor MviN signature 351 370 1.2E-23 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 PRINTS PR01806 Virulence factor MviN signature 153 174 1.2E-23 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 PRINTS PR01806 Virulence factor MviN signature 403 420 1.2E-23 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 PRINTS PR01806 Virulence factor MviN signature 253 279 1.2E-23 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 PRINTS PR01806 Virulence factor MviN signature 34 53 1.2E-23 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 501 3.5E-83 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 PIRSF PIRSF002869 1 506 6.8E-98 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 Pfam PF03023 MviN-like protein 29 457 4.7E-76 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_23080 2477ee3d2d53a07a762863be16d577a5 517 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 4 456 15.076 T 01-11-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 60.21 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 SUPERFAMILY SSF52540 9 226 9.74E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 6.8E-231 T 01-11-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 Gene3D G3DSA:2.40.30.10 339 393 7.6E-27 T 01-11-2018 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 SUPERFAMILY SSF50447 203 302 2.75E-31 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 2.5E-33 T 01-11-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 3.0E-18 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 Gene3D G3DSA:3.40.50.300 2 203 3.2E-72 T 01-11-2018 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 SUPERFAMILY SSF50465 303 395 7.48E-35 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-24 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.7E-60 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.1E-13 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_00695 1da6d30659bd64e9ea0cb14377dd9005 395 Gene3D G3DSA:2.40.30.10 206 335 5.0E-54 T 01-11-2018 DOE78_17245 52ff787b5a66fa28f323c2a3f011a072 160 Pfam PF04306 Protein of unknown function (DUF456) 21 158 1.0E-39 T 01-11-2018 IPR007403 Protein of unknown function DUF456 DOE78_20105 891ffe648e323a8b8d9d8cd296bf2968 346 PIRSF PIRSF005096 1 345 1.4E-132 T 01-11-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DOE78_20105 891ffe648e323a8b8d9d8cd296bf2968 346 Pfam PF01263 Aldose 1-epimerase 19 341 4.1E-90 T 01-11-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DOE78_20105 891ffe648e323a8b8d9d8cd296bf2968 346 Gene3D G3DSA:2.70.98.10 1 345 5.8E-114 T 01-11-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DOE78_20105 891ffe648e323a8b8d9d8cd296bf2968 346 SUPERFAMILY SSF74650 4 342 1.51E-106 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_21660 2a0824f5a9428760f1c81c5a3f2069ce 58 Pfam PF13035 Protein of unknown function (DUF3896) 2 56 1.2E-11 T 01-11-2018 IPR024994 Protein of unknown function DUF3896 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Gene3D G3DSA:3.30.470.130 1 444 5.5E-182 T 01-11-2018 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SUPERFAMILY SSF50891 623 749 4.17E-27 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 472 742 3.6E-80 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Pfam PF00364 Biotin-requiring enzyme 1133 1193 2.8E-14 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SUPERFAMILY SSF51246 330 442 3.03E-31 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Gene3D G3DSA:2.40.50.100 1120 1195 4.4E-22 T 01-11-2018 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SUPERFAMILY SSF51230 1118 1193 1.7E-19 T 01-11-2018 IPR011053 Single hybrid motif DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SUPERFAMILY SSF56059 83 352 7.78E-63 T 01-11-2018 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SMART SM00878 336 440 4.8E-39 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.7E-45 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 2.1E-30 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 448 763 2.9E-83 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 5.8E-64 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Gene3D G3DSA:2.40.100.10 878 1101 4.3E-97 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SMART SM00796 795 1028 9.5E-105 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SUPERFAMILY SSF52440 1 112 4.82E-47 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Gene3D G3DSA:2.40.100.10 622 778 4.0E-53 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1193 0.0 T 01-11-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SMART SM00797 471 759 8.6E-150 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 796 1018 1.1E-45 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SUPERFAMILY SSF50891 912 1044 5.69E-26 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 SUPERFAMILY SSF160467 796 888 2.48E-15 T 01-11-2018 DOE78_20240 ea194011a3f5fb66f27ad08174cf09fc 1214 Gene3D G3DSA:3.30.1360.40 782 873 3.1E-20 T 01-11-2018 DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Gene3D G3DSA:3.90.650.10 571 739 4.3E-43 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Gene3D G3DSA:3.30.1330.10 392 566 1.1E-60 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 737 0.0 T 01-11-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Gene3D G3DSA:3.90.650.10 34 363 2.2E-135 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 PIRSF PIRSF001587 8 739 0.0 T 01-11-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 SUPERFAMILY SSF55326 18 202 5.08E-50 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 739 328.013 T 01-11-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Gene3D G3DSA:3.30.1330.10 49 199 2.2E-135 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 SUPERFAMILY SSF56042 206 431 5.98E-55 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 SUPERFAMILY SSF56042 573 738 4.78E-39 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 SUPERFAMILY SSF55326 403 571 4.32E-56 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Pfam PF00586 AIR synthase related protein, N-terminal domain 446 563 2.6E-25 T 01-11-2018 IPR016188 PurM-like, N-terminal domain DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Pfam PF00586 AIR synthase related protein, N-terminal domain 91 195 1.8E-24 T 01-11-2018 IPR016188 PurM-like, N-terminal domain DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 712 1.3E-13 T 01-11-2018 IPR010918 PurM-like, C-terminal domain DOE78_01855 9ea96305b9fdd2b28dc16fd358c33a31 739 Pfam PF02769 AIR synthase related protein, C-terminal domain 208 361 1.0E-32 T 01-11-2018 IPR010918 PurM-like, C-terminal domain DOE78_18130 10fa289e5361580825924a4f0139f26e 571 Gene3D G3DSA:3.40.50.1220 201 365 2.1E-58 T 01-11-2018 DOE78_18130 10fa289e5361580825924a4f0139f26e 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 180 1.2E-55 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DOE78_18130 10fa289e5361580825924a4f0139f26e 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 569 5.4E-258 T 01-11-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DOE78_18130 10fa289e5361580825924a4f0139f26e 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 545 3.3E-49 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DOE78_18130 10fa289e5361580825924a4f0139f26e 571 SUPERFAMILY SSF52467 198 366 5.36E-59 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE78_18130 10fa289e5361580825924a4f0139f26e 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 434 453 - T 01-11-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DOE78_18130 10fa289e5361580825924a4f0139f26e 571 SUPERFAMILY SSF52518 374 569 3.73E-68 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_18130 10fa289e5361580825924a4f0139f26e 571 Gene3D G3DSA:3.40.50.970 9 197 5.6E-71 T 01-11-2018 DOE78_18130 10fa289e5361580825924a4f0139f26e 571 SUPERFAMILY SSF52518 14 195 1.1E-60 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_18130 10fa289e5361580825924a4f0139f26e 571 Gene3D G3DSA:3.40.50.970 369 570 4.0E-68 T 01-11-2018 DOE78_18130 10fa289e5361580825924a4f0139f26e 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 206 341 2.5E-43 T 01-11-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 SUPERFAMILY SSF53244 310 449 2.01E-42 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 Pfam PF08245 Mur ligase middle domain 117 291 7.0E-31 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 449 36.523 T 01-11-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 447 8.5E-133 T 01-11-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 Gene3D G3DSA:3.40.50.720 10 95 3.2E-32 T 01-11-2018 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 SUPERFAMILY SSF53623 103 308 1.05E-49 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 Gene3D G3DSA:3.90.190.20 315 448 5.5E-42 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 Gene3D G3DSA:3.40.1190.10 102 308 7.0E-62 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 SUPERFAMILY SSF51984 10 100 3.66E-18 T 01-11-2018 DOE78_07710 df5a6f8912b21221174eaf0cfdf61161 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 378 1.9E-8 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 Gene3D G3DSA:3.30.300.310 387 486 5.1E-35 T 01-11-2018 DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 SUPERFAMILY SSF56801 6 484 3.14E-134 T 01-11-2018 DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 Gene3D G3DSA:3.40.50.12780 2 386 7.3E-115 T 01-11-2018 DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 Pfam PF00501 AMP-binding enzyme 12 389 2.7E-84 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 Pfam PF13193 AMP-binding enzyme C-terminal domain 398 472 6.9E-21 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 6 481 45.792 T 01-11-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 31 476 5.3E-144 T 01-11-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 DOE78_19580 f1d6e0add0ad8068ff0f12fd4ef7c8a4 490 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_13125 8c9e9ed67dcf0ee83dce8e59c7cb1afd 187 Gene3D G3DSA:1.10.1740.10 5 113 1.9E-21 T 01-11-2018 DOE78_13125 8c9e9ed67dcf0ee83dce8e59c7cb1afd 187 SUPERFAMILY SSF88946 18 96 3.61E-19 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_13125 8c9e9ed67dcf0ee83dce8e59c7cb1afd 187 SUPERFAMILY SSF88659 114 178 3.92E-16 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_13125 8c9e9ed67dcf0ee83dce8e59c7cb1afd 187 Pfam PF04542 Sigma-70 region 2 26 87 5.6E-14 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_13125 8c9e9ed67dcf0ee83dce8e59c7cb1afd 187 Pfam PF08281 Sigma-70, region 4 123 174 5.6E-17 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_13125 8c9e9ed67dcf0ee83dce8e59c7cb1afd 187 Gene3D G3DSA:1.10.10.10 114 180 7.2E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13125 8c9e9ed67dcf0ee83dce8e59c7cb1afd 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 178 9.7E-28 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_07535 3d335332a655515136aa78c86be34f87 354 Pfam PF14504 CAP-associated N-terminal 67 206 1.8E-48 T 01-11-2018 IPR029410 CAP-associated domain DOE78_07535 3d335332a655515136aa78c86be34f87 354 Gene3D G3DSA:3.40.33.10 27 350 2.3E-104 T 01-11-2018 IPR035940 CAP superfamily DOE78_07535 3d335332a655515136aa78c86be34f87 354 SUPERFAMILY SSF55797 230 349 1.31E-20 T 01-11-2018 IPR035940 CAP superfamily DOE78_07535 3d335332a655515136aa78c86be34f87 354 Pfam PF00188 Cysteine-rich secretory protein family 239 348 4.7E-15 T 01-11-2018 IPR014044 CAP domain DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 Gene3D G3DSA:3.40.225.10 17 224 6.1E-65 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 20 217 1.2E-25 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 SUPERFAMILY SSF53639 18 249 3.14E-36 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 SUPERFAMILY SSF51735 428 683 3.58E-63 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 Gene3D G3DSA:3.40.50.720 415 686 1.4E-64 T 01-11-2018 DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 SMART SM01007 20 219 3.2E-35 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 647 667 6.7E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 553 569 6.7E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 600 617 6.7E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 505 516 6.7E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 579 598 6.7E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 429 446 6.7E-19 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 18 689 0.0 T 01-11-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase DOE78_02490 fd53f331a4e15cd67a7275ca5e3aca6f 689 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 435 683 2.5E-46 T 01-11-2018 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 Gene3D G3DSA:3.20.20.20 1 259 3.4E-111 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 SUPERFAMILY SSF56014 263 351 1.74E-13 T 01-11-2018 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 SUPERFAMILY SSF51717 15 214 2.2E-18 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.946 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 Pfam PF04551 GcpE protein 10 351 6.8E-141 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 1.4E-132 T 01-11-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 PIRSF PIRSF004640 1 361 1.7E-156 T 01-11-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DOE78_17265 cafd674146fb0b0941aa50efd98b7950 368 Gene3D G3DSA:3.30.413.10 261 360 1.2E-35 T 01-11-2018 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 SUPERFAMILY SSF88659 109 184 4.36E-17 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_16415 68c668c81c5af2a49e2625756393e700 252 Gene3D G3DSA:1.10.10.10 105 159 4.3E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16415 68c668c81c5af2a49e2625756393e700 252 Gene3D G3DSA:1.10.10.10 186 251 8.8E-13 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16415 68c668c81c5af2a49e2625756393e700 252 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 PRINTS PR00046 Major sigma-70 factor signature 235 246 2.1E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 PRINTS PR00046 Major sigma-70 factor signature 85 93 2.1E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 PRINTS PR00046 Major sigma-70 factor signature 220 235 2.1E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 PRINTS PR00046 Major sigma-70 factor signature 61 74 2.1E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 PRINTS PR00046 Major sigma-70 factor signature 203 215 2.1E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 Gene3D G3DSA:1.10.601.10 3 104 7.8E-28 T 01-11-2018 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 250 3.9E-37 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 250 3.2E-115 T 01-11-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 SUPERFAMILY SSF88659 171 250 7.29E-17 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_16415 68c668c81c5af2a49e2625756393e700 252 SUPERFAMILY SSF88946 6 105 2.62E-34 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 Pfam PF04545 Sigma-70, region 4 199 247 4.2E-16 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 250 6.4E-89 T 01-11-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 Pfam PF04542 Sigma-70 region 2 38 105 1.8E-17 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 PIRSF PIRSF000770 4 251 6.1E-37 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_16415 68c668c81c5af2a49e2625756393e700 252 Pfam PF04539 Sigma-70 region 3 117 181 1.4E-14 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DOE78_00855 ed842585c21135e5763887e8cd1de0ec 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 01-11-2018 IPR018102 Ribosomal S11, conserved site DOE78_00855 ed842585c21135e5763887e8cd1de0ec 129 Gene3D G3DSA:3.30.420.80 1 129 1.6E-55 T 01-11-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00855 ed842585c21135e5763887e8cd1de0ec 129 PIRSF PIRSF002131 1 129 3.7E-54 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DOE78_00855 ed842585c21135e5763887e8cd1de0ec 129 SUPERFAMILY SSF53137 14 129 2.09E-50 T 01-11-2018 DOE78_00855 ed842585c21135e5763887e8cd1de0ec 129 Pfam PF00411 Ribosomal protein S11 19 128 7.2E-53 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DOE78_00855 ed842585c21135e5763887e8cd1de0ec 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.63 T 01-11-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DOE78_00855 ed842585c21135e5763887e8cd1de0ec 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.1E-59 T 01-11-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 SUPERFAMILY SSF56784 4 207 3.05E-46 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 4 188 8.1E-65 T 01-11-2018 IPR010976 Beta-phosphoglucomutase hydrolase DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 187 8.5E-30 T 01-11-2018 DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 Gene3D G3DSA:3.40.50.1000 5 202 1.1E-65 T 01-11-2018 IPR023214 HAD superfamily DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 Gene3D G3DSA:1.10.150.240 16 92 1.1E-65 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 1.4E-6 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.4E-6 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 1.4E-6 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 188 2.3E-18 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_20205 749a4a9ba68fa14da1eebd443d39c60d 215 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 5 189 2.9E-78 T 01-11-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 Gene3D G3DSA:1.10.1050.10 6 200 8.3E-79 T 01-11-2018 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 Pfam PF01479 S4 domain 93 139 3.8E-22 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 3.4E-31 T 01-11-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 01-11-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 SMART SM01390 3 91 1.1E-48 T 01-11-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.963 T 01-11-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 SMART SM00363 92 156 9.3E-21 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 3.4E-88 T 01-11-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 Gene3D G3DSA:3.10.290.10 91 185 8.3E-79 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_18700 2e97e4cbeec98aa00e42a69f39c5aa9a 200 SUPERFAMILY SSF55174 2 200 1.31E-71 T 01-11-2018 DOE78_07970 a8ec667dd2a0fdd517373b9cfce783b8 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 3.6E-23 T 01-11-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_07970 a8ec667dd2a0fdd517373b9cfce783b8 62 Gene3D G3DSA:2.30.170.40 19 62 2.7E-18 T 01-11-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_07970 a8ec667dd2a0fdd517373b9cfce783b8 62 SUPERFAMILY SSF143800 1 61 5.89E-23 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_07970 a8ec667dd2a0fdd517373b9cfce783b8 62 Pfam PF00830 Ribosomal L28 family 3 58 1.0E-20 T 01-11-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_07970 a8ec667dd2a0fdd517373b9cfce783b8 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.751 T 01-11-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 250 3.2E-61 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 225 2.6E-24 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 ProSitePatterns PS01229 Hypothetical cof family signature 2. 206 228 - T 01-11-2018 DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 SUPERFAMILY SSF56784 3 253 6.9E-68 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 01-11-2018 DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 Gene3D G3DSA:3.30.1240.10 81 181 1.3E-78 T 01-11-2018 DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 251 4.3E-64 T 01-11-2018 DOE78_05995 2f9300261c77e5ce4b6fade2c9bb189b 259 Gene3D G3DSA:3.40.50.1000 4 249 1.3E-78 T 01-11-2018 IPR023214 HAD superfamily DOE78_17440 8528b3f6e88492aed288c57f39f4f08c 439 SUPERFAMILY SSF52096 21 186 9.02E-22 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_17440 8528b3f6e88492aed288c57f39f4f08c 439 Pfam PF01972 Serine dehydrogenase proteinase 44 117 3.5E-6 T 01-11-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 DOE78_17440 8528b3f6e88492aed288c57f39f4f08c 439 Gene3D G3DSA:2.40.50.140 368 439 3.9E-6 T 01-11-2018 DOE78_17440 8528b3f6e88492aed288c57f39f4f08c 439 Pfam PF01957 NfeD-like C-terminal, partner-binding 280 428 2.4E-16 T 01-11-2018 IPR002810 NfeD-like, C-terminal domain DOE78_17440 8528b3f6e88492aed288c57f39f4f08c 439 Gene3D G3DSA:3.90.226.10 20 227 3.7E-46 T 01-11-2018 DOE78_16185 35fb84f3a08e135a3c447adc5ef7101f 220 SUPERFAMILY SSF141371 99 178 1.57E-5 T 01-11-2018 DOE78_16185 35fb84f3a08e135a3c447adc5ef7101f 220 Gene3D G3DSA:2.40.10.220 97 214 2.0E-7 T 01-11-2018 DOE78_16185 35fb84f3a08e135a3c447adc5ef7101f 220 Pfam PF07238 PilZ domain 99 207 6.6E-16 T 01-11-2018 IPR009875 PilZ domain GO:0035438 DOE78_16185 35fb84f3a08e135a3c447adc5ef7101f 220 Pfam PF12945 Flagellar protein YcgR 3 90 1.1E-18 T 01-11-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DOE78_10905 2a2739967908982626539f06d57fd712 422 Gene3D G3DSA:1.20.1250.20 212 420 3.6E-25 T 01-11-2018 DOE78_10905 2a2739967908982626539f06d57fd712 422 SUPERFAMILY SSF103473 1 413 7.85E-67 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_10905 2a2739967908982626539f06d57fd712 422 Pfam PF07690 Major Facilitator Superfamily 16 368 7.8E-43 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_10905 2a2739967908982626539f06d57fd712 422 Gene3D G3DSA:1.20.1250.20 1 199 5.3E-35 T 01-11-2018 DOE78_15245 2ad319a01f57823c38514a941dd13e54 107 Pfam PF09685 Domain of unknown function (DUF4870) 6 106 2.7E-29 T 01-11-2018 IPR019109 Protein of unknown function DUF4870 DOE78_14745 bc8f512b6c046f0892832c0bbb23467d 260 SMART SM00646 64 172 3.1E-41 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_14745 bc8f512b6c046f0892832c0bbb23467d 260 SUPERFAMILY SSF110997 188 257 6.41E-17 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DOE78_14745 bc8f512b6c046f0892832c0bbb23467d 260 Gene3D G3DSA:3.30.70.1070 190 259 3.3E-24 T 01-11-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DOE78_14745 bc8f512b6c046f0892832c0bbb23467d 260 Gene3D G3DSA:3.40.630.40 1 174 1.0E-52 T 01-11-2018 DOE78_14745 bc8f512b6c046f0892832c0bbb23467d 260 SUPERFAMILY SSF53187 1 177 2.54E-51 T 01-11-2018 DOE78_14745 bc8f512b6c046f0892832c0bbb23467d 260 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 1.5E-44 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_14745 bc8f512b6c046f0892832c0bbb23467d 260 Pfam PF05036 Sporulation related domain 189 257 1.4E-16 T 01-11-2018 IPR007730 Sporulation-like domain GO:0042834 DOE78_15770 a1a1aba95ad7aac6a3d3e381bc03ed8c 363 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 4 205 2.1E-14 T 01-11-2018 IPR001099 Chalcone/stilbene synthase, N-terminal DOE78_15770 a1a1aba95ad7aac6a3d3e381bc03ed8c 363 SUPERFAMILY SSF53901 4 360 8.38E-44 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_15770 a1a1aba95ad7aac6a3d3e381bc03ed8c 363 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 231 359 2.6E-20 T 01-11-2018 IPR012328 Chalcone/stilbene synthase, C-terminal DOE78_15770 a1a1aba95ad7aac6a3d3e381bc03ed8c 363 Gene3D G3DSA:3.40.47.10 1 213 3.3E-59 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_15770 a1a1aba95ad7aac6a3d3e381bc03ed8c 363 PIRSF PIRSF000451 1 363 9.1E-119 T 01-11-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 DOE78_15770 a1a1aba95ad7aac6a3d3e381bc03ed8c 363 Gene3D G3DSA:3.40.47.10 220 359 1.3E-41 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_08430 70e40217d03dc208104a0cdbf7034de5 411 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 01-11-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DOE78_08430 70e40217d03dc208104a0cdbf7034de5 411 Pfam PF05193 Peptidase M16 inactive domain 166 338 4.2E-38 T 01-11-2018 IPR007863 Peptidase M16, C-terminal DOE78_08430 70e40217d03dc208104a0cdbf7034de5 411 Gene3D G3DSA:3.30.830.10 1 215 1.2E-79 T 01-11-2018 DOE78_08430 70e40217d03dc208104a0cdbf7034de5 411 Gene3D G3DSA:3.30.830.10 218 411 1.1E-57 T 01-11-2018 DOE78_08430 70e40217d03dc208104a0cdbf7034de5 411 SUPERFAMILY SSF63411 3 204 1.31E-59 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DOE78_08430 70e40217d03dc208104a0cdbf7034de5 411 SUPERFAMILY SSF63411 227 401 4.3E-48 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DOE78_08430 70e40217d03dc208104a0cdbf7034de5 411 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 3.9E-48 T 01-11-2018 IPR011765 Peptidase M16, N-terminal DOE78_06440 149457d3c79b7a93aafe5d7f5679981a 232 Gene3D G3DSA:1.10.3910.10 1 66 1.8E-6 T 01-11-2018 IPR038062 ScdA-like, N-terminal domain superfamily DOE78_06440 149457d3c79b7a93aafe5d7f5679981a 232 Gene3D G3DSA:1.20.120.520 84 232 1.1E-20 T 01-11-2018 DOE78_06440 149457d3c79b7a93aafe5d7f5679981a 232 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 11 229 5.5E-75 T 01-11-2018 IPR019903 Repair of iron centres family DOE78_06440 149457d3c79b7a93aafe5d7f5679981a 232 Pfam PF01814 Hemerythrin HHE cation binding domain 85 229 5.6E-21 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DOE78_06440 149457d3c79b7a93aafe5d7f5679981a 232 Pfam PF04405 Domain of Unknown function (DUF542) 9 61 1.8E-19 T 01-11-2018 IPR019903 Repair of iron centres family DOE78_06440 149457d3c79b7a93aafe5d7f5679981a 232 SUPERFAMILY SSF140683 4 63 1.23E-6 T 01-11-2018 IPR038062 ScdA-like, N-terminal domain superfamily DOE78_15830 3f048e613138f7efa31c5a894566e4d4 188 Hamap MF_01575 UPF0398 protein . 2 179 35.357 T 01-11-2018 IPR010697 Protein of unknown function DUF1273 DOE78_15830 3f048e613138f7efa31c5a894566e4d4 188 SUPERFAMILY SSF102405 3 179 1.19E-61 T 01-11-2018 DOE78_15830 3f048e613138f7efa31c5a894566e4d4 188 PIRSF PIRSF021290 2 181 1.9E-69 T 01-11-2018 IPR010697 Protein of unknown function DUF1273 DOE78_15830 3f048e613138f7efa31c5a894566e4d4 188 Gene3D G3DSA:3.40.50.450 1 182 1.1E-68 T 01-11-2018 DOE78_15830 3f048e613138f7efa31c5a894566e4d4 188 Pfam PF06908 Protein of unknown function (DUF1273) 5 173 6.0E-70 T 01-11-2018 IPR010697 Protein of unknown function DUF1273 DOE78_13030 63977b6515be8eb61809b7f556d903b9 294 Gene3D G3DSA:3.40.190.10 80 180 2.8E-51 T 01-11-2018 DOE78_13030 63977b6515be8eb61809b7f556d903b9 294 Gene3D G3DSA:3.40.190.10 7 288 2.8E-51 T 01-11-2018 DOE78_13030 63977b6515be8eb61809b7f556d903b9 294 SUPERFAMILY SSF53850 13 232 4.41E-38 T 01-11-2018 DOE78_13030 63977b6515be8eb61809b7f556d903b9 294 Pfam PF09084 NMT1/THI5 like 12 220 6.5E-46 T 01-11-2018 IPR015168 SsuA/THI5-like DOE78_14285 e82ac455a41fb6a845adfd0be596ba49 86 Pfam PF12652 CotJB protein 10 85 1.7E-27 T 01-11-2018 IPR024207 Spore coat assembly protein CotJB, domain DOE78_14285 e82ac455a41fb6a845adfd0be596ba49 86 PIRSF PIRSF010606 1 86 1.2E-38 T 01-11-2018 IPR016571 Spore coat assembly protein CotJB DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 Gene3D G3DSA:3.40.50.2300 186 352 3.1E-89 T 01-11-2018 DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 SMART SM00345 2 61 3.0E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 21 35 1.2E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 51 1.2E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 Gene3D G3DSA:3.40.50.2300 83 347 3.1E-89 T 01-11-2018 DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 SUPERFAMILY SSF53822 82 356 2.77E-68 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 SUPERFAMILY SSF46785 2 65 1.74E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 Gene3D G3DSA:1.10.10.10 1 61 8.3E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 Pfam PF13377 Periplasmic binding protein-like domain 194 355 7.6E-34 T 01-11-2018 DOE78_04310 814b1aeb3b931f7c83505a89288a08a5 364 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 60 1.0E-16 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_01225 525d80ce9c13ed8e648af058cacce1d2 525 Pfam PF13444 Acetyltransferase (GNAT) domain 20 112 5.9E-5 T 01-11-2018 DOE78_01225 525d80ce9c13ed8e648af058cacce1d2 525 SUPERFAMILY SSF55729 5 167 2.83E-20 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_01225 525d80ce9c13ed8e648af058cacce1d2 525 Gene3D G3DSA:3.40.630.30 3 165 1.9E-15 T 01-11-2018 DOE78_01225 525d80ce9c13ed8e648af058cacce1d2 525 SUPERFAMILY SSF53383 184 519 1.51E-50 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_01225 525d80ce9c13ed8e648af058cacce1d2 525 Gene3D G3DSA:3.40.640.10 192 423 8.5E-70 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_01225 525d80ce9c13ed8e648af058cacce1d2 525 Pfam PF00266 Aminotransferase class-V 203 355 5.5E-12 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_01225 525d80ce9c13ed8e648af058cacce1d2 525 Gene3D G3DSA:3.90.1150.10 184 518 8.5E-70 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 SUPERFAMILY SSF52777 222 448 2.45E-84 T 01-11-2018 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 SUPERFAMILY SSF47005 118 163 3.4E-10 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Gene3D G3DSA:4.10.320.10 119 166 3.2E-13 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Gene3D G3DSA:4.10.320.10 167 207 8.9E-12 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Gene3D G3DSA:3.30.559.10 208 446 2.3E-92 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 223 448 1.6E-83 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Pfam PF02817 e3 binding domain 170 203 6.9E-11 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Pfam PF02817 e3 binding domain 125 159 3.3E-11 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Gene3D G3DSA:2.40.50.100 1 97 5.4E-24 T 01-11-2018 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 SUPERFAMILY SSF47005 168 206 1.31E-8 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 SUPERFAMILY SSF51230 1 94 7.85E-23 T 01-11-2018 IPR011053 Single hybrid motif DOE78_19985 114a0f825fc20f61c083fd8a552db845 449 Pfam PF00364 Biotin-requiring enzyme 4 76 6.2E-12 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_12825 de8e7f1532aa00df2de8a4a0209400e8 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 208 2.6E-48 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_12825 de8e7f1532aa00df2de8a4a0209400e8 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 252 6.8E-113 T 01-11-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 DOE78_12825 de8e7f1532aa00df2de8a4a0209400e8 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_12825 de8e7f1532aa00df2de8a4a0209400e8 257 Gene3D G3DSA:3.40.1010.10 1 110 4.0E-37 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_12825 de8e7f1532aa00df2de8a4a0209400e8 257 Gene3D G3DSA:3.30.950.10 111 231 3.2E-49 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DOE78_12825 de8e7f1532aa00df2de8a4a0209400e8 257 SUPERFAMILY SSF53790 2 240 8.9E-68 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 Gene3D G3DSA:3.30.1330.30 1 73 7.1E-13 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 8.9E-22 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 SUPERFAMILY SSF75217 67 243 2.16E-48 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 242 1.3E-84 T 01-11-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 Gene3D G3DSA:3.40.1280.10 74 243 8.7E-55 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 SMART SM00967 5 79 5.5E-22 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 Pfam PF00588 SpoU rRNA Methylase family 96 236 2.3E-37 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DOE78_00610 caca9ce6b2e46c25659f8d9b3076047b 247 SUPERFAMILY SSF55315 3 76 4.12E-17 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 Gene3D G3DSA:1.10.10.10 78 163 6.5E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 160 2.9E-29 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 SUPERFAMILY SSF46767 78 161 2.88E-28 T 01-11-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 01-11-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 Gene3D G3DSA:3.30.160.70 4 75 5.1E-11 T 01-11-2018 DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 160 35.373 T 01-11-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 159 1.8E-33 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DOE78_07005 ba1ab07d25b382d2923ad38f89ffe6b5 165 SUPERFAMILY SSF53155 5 83 1.7E-11 T 01-11-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DOE78_08910 f9374592d959c980a173af9dd2bf4e1d 593 Gene3D G3DSA:1.20.1560.10 4 336 9.7E-84 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08910 f9374592d959c980a173af9dd2bf4e1d 593 Gene3D G3DSA:3.40.50.300 347 591 1.5E-87 T 01-11-2018 DOE78_08910 f9374592d959c980a173af9dd2bf4e1d 593 Pfam PF00664 ABC transporter transmembrane region 36 304 1.1E-41 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_08910 f9374592d959c980a173af9dd2bf4e1d 593 SUPERFAMILY SSF52540 341 586 1.73E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08910 f9374592d959c980a173af9dd2bf4e1d 593 Pfam PF00005 ABC transporter 367 516 2.1E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08910 f9374592d959c980a173af9dd2bf4e1d 593 SUPERFAMILY SSF90123 22 338 2.35E-76 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08910 f9374592d959c980a173af9dd2bf4e1d 593 SMART SM00382 376 562 4.4E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_23615 aa705943020a663996862aa17ed844df 81 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 10 75 3.8E-25 T 01-11-2018 IPR009526 Protein of unknown function DUF1146 DOE78_23615 aa705943020a663996862aa17ed844df 81 Pfam PF06612 Protein of unknown function (DUF1146) 17 64 8.6E-21 T 01-11-2018 IPR009526 Protein of unknown function DUF1146 DOE78_01925 f00e256afce678c38019d47133fa2315 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 514 4.0E-246 T 01-11-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 DOE78_01925 f00e256afce678c38019d47133fa2315 515 SUPERFAMILY SSF53720 5 511 1.09E-153 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_01925 f00e256afce678c38019d47133fa2315 515 Pfam PF00171 Aldehyde dehydrogenase family 50 510 1.6E-155 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_01925 f00e256afce678c38019d47133fa2315 515 Gene3D G3DSA:3.40.605.10 39 502 2.1E-185 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_01925 f00e256afce678c38019d47133fa2315 515 Gene3D G3DSA:3.40.309.10 289 479 2.1E-185 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_01925 f00e256afce678c38019d47133fa2315 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DOE78_01925 f00e256afce678c38019d47133fa2315 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 68.481 T 01-11-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 DOE78_01925 f00e256afce678c38019d47133fa2315 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_11510 3d50f3da8cad32d32503b5ec9ccc82ea 676 SUPERFAMILY SSF52540 1 301 1.61E-14 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11510 3d50f3da8cad32d32503b5ec9ccc82ea 676 Gene3D G3DSA:3.40.50.300 1 285 1.5E-20 T 01-11-2018 DOE78_11510 3d50f3da8cad32d32503b5ec9ccc82ea 676 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 1 667 1.4E-93 T 01-11-2018 IPR017599 DNA sulphur modification protein DndD DOE78_11510 3d50f3da8cad32d32503b5ec9ccc82ea 676 Pfam PF13476 AAA domain 5 234 1.2E-19 T 01-11-2018 IPR038729 Rad50/SbcC-type AAA domain DOE78_11510 3d50f3da8cad32d32503b5ec9ccc82ea 676 SUPERFAMILY SSF52540 33 638 1.44E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11510 3d50f3da8cad32d32503b5ec9ccc82ea 676 Gene3D G3DSA:3.40.50.300 301 648 7.6E-11 T 01-11-2018 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 PRINTS PR01607 Apyrase family signature 561 580 4.6E-25 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 PRINTS PR01607 Apyrase family signature 271 294 4.6E-25 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 PRINTS PR01607 Apyrase family signature 245 262 4.6E-25 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 PRINTS PR01607 Apyrase family signature 45 63 4.6E-25 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 PRINTS PR01607 Apyrase family signature 460 483 4.6E-25 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 PRINTS PR01607 Apyrase family signature 323 343 4.6E-25 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Gene3D G3DSA:3.60.21.10 39 387 2.5E-117 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 SUPERFAMILY SSF56300 43 386 1.23E-75 T 01-11-2018 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Gene3D G3DSA:3.90.780.10 990 1166 1.5E-37 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 SUPERFAMILY SSF55816 977 1168 4.97E-38 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 SUPERFAMILY SSF55816 388 625 2.49E-44 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Gene3D G3DSA:3.90.780.10 442 624 5.0E-61 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 ProSitePatterns PS00786 5'-nucleotidase signature 2. 750 761 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Gene3D G3DSA:3.60.21.10 669 977 2.0E-82 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 SUPERFAMILY SSF56300 671 974 2.93E-73 T 01-11-2018 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 ProSitePatterns PS00786 5'-nucleotidase signature 2. 133 144 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Pfam PF02872 5'-nucleotidase, C-terminal domain 980 1121 3.6E-31 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Pfam PF02872 5'-nucleotidase, C-terminal domain 388 587 2.1E-23 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Pfam PF00149 Calcineurin-like phosphoesterase 47 288 2.6E-12 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_24425 9bf65ec045e289ed1e66fd2a85a235d4 1168 Pfam PF00149 Calcineurin-like phosphoesterase 676 904 2.4E-11 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 SUPERFAMILY SSF51735 3 208 6.23E-56 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 Gene3D G3DSA:3.40.50.720 1 225 2.4E-57 T 01-11-2018 DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PIRSF PIRSF000126 1 253 1.8E-65 T 01-11-2018 DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 6.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 6.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 6.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02285 49aa33e78b6cb6325b7a1c4ef94c25af 254 Pfam PF00106 short chain dehydrogenase 3 187 1.1E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 Gene3D G3DSA:3.40.50.720 3 204 5.6E-77 T 01-11-2018 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 SUPERFAMILY SSF48179 203 383 2.01E-38 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 Gene3D G3DSA:1.10.1040.10 206 382 9.8E-56 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.9E-19 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 PRINTS PR00084 Mannitol dehydrogenase signature 169 184 1.9E-19 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 1.9E-19 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 1.9E-19 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 01-11-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 367 5.6E-52 T 01-11-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.9E-25 T 01-11-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 SUPERFAMILY SSF51735 3 202 7.51E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_01165 fe2afff2c8344795f85057ea5c54752a 386 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 39.469 T 01-11-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 Gene3D G3DSA:1.20.1480.50 177 277 1.3E-12 T 01-11-2018 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 426 8.3E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 8.3E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 8.3E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 8.3E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 Gene3D G3DSA:1.10.287.950 278 576 1.5E-63 T 01-11-2018 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 SMART SM00283 301 576 1.8E-62 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 Pfam PF00672 HAMP domain 223 268 1.1E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 191 2.2E-19 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 528 8.1E-39 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 SUPERFAMILY SSF58104 240 576 3.79E-69 T 01-11-2018 DOE78_05080 8d07dfbc30708233f605bf3ca9c5eddc 577 SMART SM00304 218 272 3.2E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_15445 aef4b667855ecc2bcb01ee87029810de 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_15445 aef4b667855ecc2bcb01ee87029810de 450 SUPERFAMILY SSF53383 12 436 1.03E-117 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_15445 aef4b667855ecc2bcb01ee87029810de 450 Pfam PF00202 Aminotransferase class-III 18 434 1.1E-104 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_15445 aef4b667855ecc2bcb01ee87029810de 450 Gene3D G3DSA:3.40.640.10 50 325 7.1E-143 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_15445 aef4b667855ecc2bcb01ee87029810de 450 Gene3D G3DSA:3.90.1150.10 21 432 7.1E-143 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_15445 aef4b667855ecc2bcb01ee87029810de 450 PIRSF PIRSF000521 10 439 5.0E-37 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Gene3D G3DSA:3.30.54.20 626 679 1.4E-51 T 01-11-2018 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 SUPERFAMILY SSF50447 455 554 1.29E-19 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 SMART SM00863 655 698 3.2E-21 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Gene3D G3DSA:3.30.980.10 564 699 1.4E-51 T 01-11-2018 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Gene3D G3DSA:3.10.310.40 765 876 1.9E-36 T 01-11-2018 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Pfam PF02272 DHHA1 domain 735 874 1.3E-30 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Gene3D G3DSA:3.30.930.10 4 242 7.5E-95 T 01-11-2018 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 SUPERFAMILY SSF55186 554 710 1.7E-53 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 877 186.529 T 01-11-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 1.2E-18 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Gene3D G3DSA:2.40.30.130 461 554 2.1E-10 T 01-11-2018 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 SUPERFAMILY SSF101353 246 439 9.02E-69 T 01-11-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 Pfam PF01411 tRNA synthetases class II (A) 8 557 4.1E-215 T 01-11-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 SUPERFAMILY SSF55681 5 245 8.45E-90 T 01-11-2018 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 9.3E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 9.3E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 9.3E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 9.3E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DOE78_17695 8f23e25c62a927a9d564b9268f00f220 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 9.3E-32 T 01-11-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 218 4.3E-46 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 01-11-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 Gene3D G3DSA:3.30.70.580 62 220 5.7E-54 T 01-11-2018 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 Pfam PF01479 S4 domain 1 46 4.4E-12 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 SMART SM00363 1 61 2.7E-11 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 Pfam PF00849 RNA pseudouridylate synthase 61 186 2.2E-15 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 Gene3D G3DSA:3.10.290.10 1 54 8.6E-21 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 Gene3D G3DSA:3.30.70.1560 126 199 5.7E-54 T 01-11-2018 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 SUPERFAMILY SSF55174 1 79 2.35E-13 T 01-11-2018 DOE78_24170 803a7db800e5de8b0dd772802cce6e27 234 SUPERFAMILY SSF55120 60 221 4.56E-40 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_22095 114b7f82e3141f7c49bff4ba72ffe3ca 339 Gene3D G3DSA:1.10.10.10 19 89 2.4E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22095 114b7f82e3141f7c49bff4ba72ffe3ca 339 SUPERFAMILY SSF100950 96 337 1.26E-68 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_22095 114b7f82e3141f7c49bff4ba72ffe3ca 339 Gene3D G3DSA:3.40.50.1360 90 339 2.1E-81 T 01-11-2018 DOE78_22095 114b7f82e3141f7c49bff4ba72ffe3ca 339 SUPERFAMILY SSF46785 19 83 2.98E-11 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_22095 114b7f82e3141f7c49bff4ba72ffe3ca 339 Pfam PF04198 Putative sugar-binding domain 90 337 3.5E-72 T 01-11-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 SUPERFAMILY SSF102735 1 132 2.88E-40 T 01-11-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 239 1.2E-16 T 01-11-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 Gene3D G3DSA:1.10.3120.10 117 425 1.7E-95 T 01-11-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 Gene3D G3DSA:3.30.70.1050 1 116 4.6E-32 T 01-11-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 9.2E-45 T 01-11-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 Gene3D G3DSA:3.10.50.40 151 248 1.7E-95 T 01-11-2018 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 SUPERFAMILY SSF109998 250 425 1.96E-44 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 Hamap MF_00303 Trigger factor [tig]. 1 427 24.355 T 01-11-2018 IPR005215 Trigger factor GO:0015031 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.7E-45 T 01-11-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 SUPERFAMILY SSF54534 89 243 2.95E-40 T 01-11-2018 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 TIGRFAM TIGR00115 tig: trigger factor 12 421 3.3E-143 T 01-11-2018 IPR005215 Trigger factor GO:0015031 DOE78_18090 30b582ee03440fbddef5e5fa45d3d31d 427 PIRSF PIRSF003095 1 427 3.3E-139 T 01-11-2018 IPR005215 Trigger factor GO:0015031 DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 SMART SM00419 162 210 6.6E-4 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 SUPERFAMILY SSF51206 13 136 3.67E-22 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 SMART SM00100 4 123 2.9E-5 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 Gene3D G3DSA:1.10.10.10 139 227 6.2E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 SUPERFAMILY SSF46785 143 225 1.54E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 Pfam PF13545 Crp-like helix-turn-helix domain 146 216 2.8E-12 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 Pfam PF00027 Cyclic nucleotide-binding domain 23 110 7.5E-13 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_17240 2472d04e9cb7d58841af32aa75613d74 231 Gene3D G3DSA:2.60.120.10 7 137 1.2E-20 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_07145 e840477459d9e1dac6f9c911b2855ab7 62 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 2.1E-29 T 01-11-2018 IPR018690 Protein of unknown function DUF2187 DOE78_17605 13722b583a3f36940298f675df8edb2f 261 Pfam PF02666 Phosphatidylserine decarboxylase 59 256 2.1E-58 T 01-11-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DOE78_17605 13722b583a3f36940298f675df8edb2f 261 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 7 259 36.768 T 01-11-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DOE78_17605 13722b583a3f36940298f675df8edb2f 261 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 257 1.3E-54 T 01-11-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DOE78_19505 82746c093f7c910cd1af99f36522b823 156 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_19505 82746c093f7c910cd1af99f36522b823 156 Pfam PF00293 NUDIX domain 38 111 2.4E-12 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_19505 82746c093f7c910cd1af99f36522b823 156 SUPERFAMILY SSF55811 11 107 6.36E-18 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_19505 82746c093f7c910cd1af99f36522b823 156 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 154 5.5E-52 T 01-11-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 DOE78_19505 82746c093f7c910cd1af99f36522b823 156 Gene3D G3DSA:3.90.79.10 1 155 3.8E-35 T 01-11-2018 DOE78_19505 82746c093f7c910cd1af99f36522b823 156 PRINTS PR00502 NUDIX hydrolase family signature 62 77 1.3E-6 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_19505 82746c093f7c910cd1af99f36522b823 156 PRINTS PR00502 NUDIX hydrolase family signature 48 62 1.3E-6 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_11810 e375a473762709f957aa1fea9d9545d9 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_11810 e375a473762709f957aa1fea9d9545d9 519 Pfam PF00501 AMP-binding enzyme 10 412 2.0E-90 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_11810 e375a473762709f957aa1fea9d9545d9 519 Gene3D G3DSA:3.30.300.310 408 510 1.4E-31 T 01-11-2018 DOE78_11810 e375a473762709f957aa1fea9d9545d9 519 Gene3D G3DSA:3.40.50.12780 1 405 2.2E-101 T 01-11-2018 DOE78_11810 e375a473762709f957aa1fea9d9545d9 519 SUPERFAMILY SSF56801 5 508 9.29E-136 T 01-11-2018 DOE78_11810 e375a473762709f957aa1fea9d9545d9 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 497 4.8E-17 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 1.6E-25 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 Gene3D G3DSA:3.40.50.10380 1 157 6.1E-76 T 01-11-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 SMART SM00919 160 384 9.3E-138 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 SMART SM01274 15 148 4.5E-84 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 SUPERFAMILY SSF51735 160 402 1.59E-85 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 PIRSF PIRSF000106 41 408 4.2E-86 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 PRINTS PR00072 Malic enzyme signature 276 292 3.9E-9 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 PRINTS PR00072 Malic enzyme signature 156 172 3.9E-9 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 PRINTS PR00072 Malic enzyme signature 77 99 3.9E-9 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 Pfam PF00390 Malic enzyme, N-terminal domain 17 148 3.7E-29 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 01-11-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 Gene3D G3DSA:3.40.50.720 158 391 5.4E-90 T 01-11-2018 DOE78_18500 5adb28a2bc78243e9267b0768ffb42ce 412 SUPERFAMILY SSF53223 6 158 2.66E-57 T 01-11-2018 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 SUPERFAMILY SSF46689 471 520 6.72E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 Pfam PF12833 Helix-turn-helix domain 441 519 3.3E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 SMART SM00448 1 115 8.6E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 Pfam PF00072 Response regulator receiver domain 4 115 1.4E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 502 518 3.2E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 487 502 3.2E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 Gene3D G3DSA:3.40.50.2300 1 137 4.4E-28 T 01-11-2018 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 SUPERFAMILY SSF52172 2 135 2.28E-28 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 SUPERFAMILY SSF46689 421 469 5.64E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 SMART SM00342 435 518 1.6E-27 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 Gene3D G3DSA:1.10.10.60 416 472 2.3E-16 T 01-11-2018 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 472 514 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_13865 e6b34511ecf7928ab6ed9fb421d7e02a 525 Gene3D G3DSA:1.10.10.2730 473 519 2.1E-20 T 01-11-2018 DOE78_03940 bea2db1b9c5f9016ff87e16f6d600380 374 Pfam PF13518 Helix-turn-helix domain 66 118 1.4E-5 T 01-11-2018 DOE78_03940 bea2db1b9c5f9016ff87e16f6d600380 374 SUPERFAMILY SSF48295 2 58 1.15E-11 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DOE78_03940 bea2db1b9c5f9016ff87e16f6d600380 374 Pfam PF13276 HTH-like domain 141 176 4.4E-13 T 01-11-2018 IPR025948 HTH-like domain DOE78_03940 bea2db1b9c5f9016ff87e16f6d600380 374 Pfam PF01527 Transposase 2 53 1.4E-5 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DOE78_03940 bea2db1b9c5f9016ff87e16f6d600380 374 SUPERFAMILY SSF53098 202 364 1.19E-25 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_03940 bea2db1b9c5f9016ff87e16f6d600380 374 SUPERFAMILY SSF48295 55 115 4.29E-10 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DOE78_03940 bea2db1b9c5f9016ff87e16f6d600380 374 Pfam PF13333 Integrase core domain 315 369 1.8E-19 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 DOE78_15200 6554cc44bc753b94e808d8be9730f083 279 SMART SM00559 52 181 3.2E-50 T 01-11-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 DOE78_15200 6554cc44bc753b94e808d8be9730f083 279 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 254 33.71 T 01-11-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type DOE78_15200 6554cc44bc753b94e808d8be9730f083 279 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 191 9.2E-42 T 01-11-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 DOE78_15200 6554cc44bc753b94e808d8be9730f083 279 Gene3D G3DSA:2.40.290.10 2 174 8.4E-21 T 01-11-2018 IPR016194 SPOC-like, C-terminal domain superfamily DOE78_15200 6554cc44bc753b94e808d8be9730f083 279 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 256 1.9E-95 T 01-11-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type DOE78_15200 6554cc44bc753b94e808d8be9730f083 279 PIRSF PIRSF006493 1 279 4.8E-105 T 01-11-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type DOE78_15200 6554cc44bc753b94e808d8be9730f083 279 SUPERFAMILY SSF100939 2 259 4.51E-55 T 01-11-2018 IPR016194 SPOC-like, C-terminal domain superfamily DOE78_21150 c91d57bc1352c792be8c68303c61558f 281 Pfam PF03180 NLPA lipoprotein 41 279 4.5E-88 T 01-11-2018 IPR004872 Lipoprotein NlpA family DOE78_21150 c91d57bc1352c792be8c68303c61558f 281 Gene3D G3DSA:3.40.190.10 122 230 2.5E-97 T 01-11-2018 DOE78_21150 c91d57bc1352c792be8c68303c61558f 281 Gene3D G3DSA:3.40.190.10 43 277 2.5E-97 T 01-11-2018 DOE78_21150 c91d57bc1352c792be8c68303c61558f 281 SUPERFAMILY SSF53850 41 279 8.53E-80 T 01-11-2018 DOE78_21150 c91d57bc1352c792be8c68303c61558f 281 PIRSF PIRSF002854 1 281 2.5E-102 T 01-11-2018 IPR004872 Lipoprotein NlpA family DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 Gene3D G3DSA:3.30.450.20 183 300 1.1E-6 T 01-11-2018 DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 SMART SM00304 322 374 2.4E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 Pfam PF06580 Histidine kinase 386 465 6.5E-24 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 Gene3D G3DSA:1.10.8.500 322 373 2.9E-11 T 01-11-2018 DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 Pfam PF02743 Cache domain 47 283 3.0E-16 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 Pfam PF00672 HAMP domain 322 369 5.0E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 SMART SM00387 480 590 5.2E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 SUPERFAMILY SSF55874 439 588 1.44E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 588 1.7E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 SUPERFAMILY SSF158472 323 373 3.53E-11 T 01-11-2018 DOE78_02515 39349a3ffaba1a94f4ff79e21450109d 601 Gene3D G3DSA:3.30.565.10 441 590 2.9E-20 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 308 329 1.3E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 16 38 1.3E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 278 293 1.3E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 214 232 1.3E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 234 251 1.3E-41 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 SUPERFAMILY SSF160544 250 357 4.19E-42 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 Gene3D G3DSA:3.40.1690.10 224 360 5.1E-57 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 353 1.7E-131 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DOE78_08260 bf62bd2a7e322429a7f88943ed13a178 360 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 14 359 2.0E-133 T 01-11-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 DOE78_09845 3229d6d32d302f8e8c112d30c12b83d5 306 Pfam PF00005 ABC transporter 21 161 6.4E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_09845 3229d6d32d302f8e8c112d30c12b83d5 306 SUPERFAMILY SSF52540 3 223 2.76E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09845 3229d6d32d302f8e8c112d30c12b83d5 306 SMART SM00382 29 209 8.3E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_09845 3229d6d32d302f8e8c112d30c12b83d5 306 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_09845 3229d6d32d302f8e8c112d30c12b83d5 306 Gene3D G3DSA:3.40.50.300 1 233 1.8E-60 T 01-11-2018 DOE78_23845 af971b942a7b9ca697eebbaa363c980c 190 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 180 15.706 T 01-11-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 DOE78_23845 af971b942a7b9ca697eebbaa363c980c 190 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 91 2.0E-35 T 01-11-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 DOE78_23845 af971b942a7b9ca697eebbaa363c980c 190 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 6.1E-14 T 01-11-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 DOE78_23845 af971b942a7b9ca697eebbaa363c980c 190 Gene3D G3DSA:1.10.10.1250 2 82 2.4E-34 T 01-11-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 Gene3D G3DSA:3.40.50.2300 1 134 2.6E-41 T 01-11-2018 DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 SUPERFAMILY SSF52172 3 126 2.85E-43 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 SMART SM00448 5 115 6.2E-47 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 Gene3D G3DSA:1.10.10.10 136 238 4.9E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 SMART SM00862 156 233 1.9E-27 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 SUPERFAMILY SSF46894 133 234 1.6E-31 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 233 2.8E-28 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_16315 2e3498cd5593b24675fa9eae67e1b034 238 Pfam PF00072 Response regulator receiver domain 7 115 7.1E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_12075 61a569ea1dedffed584cab60aa2686b4 326 Pfam PF00248 Aldo/keto reductase family 17 313 1.8E-57 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain DOE78_12075 61a569ea1dedffed584cab60aa2686b4 326 SUPERFAMILY SSF51430 9 317 3.14E-71 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_12075 61a569ea1dedffed584cab60aa2686b4 326 Gene3D G3DSA:3.20.20.100 2 326 5.8E-94 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 SUPERFAMILY SSF56300 5 268 2.66E-64 T 01-11-2018 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 Gene3D G3DSA:3.60.21.10 2 272 5.2E-54 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 SUPERFAMILY SSF55816 294 453 9.81E-20 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 PRINTS PR01607 Apyrase family signature 326 349 4.9E-20 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 PRINTS PR01607 Apyrase family signature 4 22 4.9E-20 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 PRINTS PR01607 Apyrase family signature 404 423 4.9E-20 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 PRINTS PR01607 Apyrase family signature 189 212 4.9E-20 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 PRINTS PR01607 Apyrase family signature 170 187 4.9E-20 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 PRINTS PR01607 Apyrase family signature 217 237 4.9E-20 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 Pfam PF02872 5'-nucleotidase, C-terminal domain 291 417 1.1E-7 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 PIRSF PIRSF036361 2 454 4.8E-162 T 01-11-2018 IPR011240 Phosphoesterase-related protein YunD DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 Pfam PF00149 Calcineurin-like phosphoesterase 7 206 7.5E-11 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_21110 c00a86f2aeade5fb2d00178a0674b1a6 454 Gene3D G3DSA:3.90.780.10 279 436 4.1E-9 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_09290 da73e60867d1179f220533893836d0c9 337 Gene3D G3DSA:3.40.50.10490 166 325 5.1E-50 T 01-11-2018 DOE78_09290 da73e60867d1179f220533893836d0c9 337 Pfam PF01380 SIS domain 36 152 2.3E-13 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_09290 da73e60867d1179f220533893836d0c9 337 SUPERFAMILY SSF53697 19 335 2.13E-53 T 01-11-2018 DOE78_09290 da73e60867d1179f220533893836d0c9 337 PIRSF PIRSF009290 1 337 4.2E-114 T 01-11-2018 IPR024713 Fructosamine deglycase FrlB DOE78_09290 da73e60867d1179f220533893836d0c9 337 Gene3D G3DSA:3.40.50.10490 2 165 2.2E-35 T 01-11-2018 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 Pfam PF03144 Elongation factor Tu domain 2 311 377 1.2E-9 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 SUPERFAMILY SSF50447 259 386 6.13E-27 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 Gene3D G3DSA:3.40.50.300 109 272 6.7E-103 T 01-11-2018 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 Gene3D G3DSA:3.40.50.300 71 376 6.7E-103 T 01-11-2018 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 Pfam PF00009 Elongation factor Tu GTP binding domain 12 274 1.2E-49 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 522 49.591 T 01-11-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 510 9.2E-44 T 01-11-2018 IPR032090 Peptide chain release factor 3, C-terminal DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 PRINTS PR00315 GTP-binding elongation factor signature 64 72 1.8E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 PRINTS PR00315 GTP-binding elongation factor signature 100 111 1.8E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 PRINTS PR00315 GTP-binding elongation factor signature 84 94 1.8E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.8E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 PRINTS PR00315 GTP-binding elongation factor signature 136 145 1.8E-11 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 SUPERFAMILY SSF52540 9 274 1.54E-84 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 Gene3D G3DSA:3.30.70.3280 388 523 2.5E-47 T 01-11-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 149 4.0E-21 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 SUPERFAMILY SSF54980 391 462 1.29E-15 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_06930 f8983778fe3ec0b442f68a917c76f9ce 526 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 7 520 5.0E-207 T 01-11-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 Gene3D G3DSA:3.40.50.720 7 218 4.8E-67 T 01-11-2018 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 SMART SM00984 339 434 5.9E-26 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 PIRSF PIRSF000124 23 443 6.4E-68 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 SUPERFAMILY SSF48179 221 314 4.76E-33 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 PIRSF PIRSF500136 13 445 7.6E-167 T 01-11-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 24 200 3.9E-45 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 340 433 9.7E-21 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 Gene3D G3DSA:3.40.50.720 221 444 7.0E-66 T 01-11-2018 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 SUPERFAMILY SSF52413 324 433 1.83E-24 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 222 312 8.3E-32 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 24 430 3.9E-133 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_23005 31f62f63fd111eb3b8af4ed4c1d9044f 445 SUPERFAMILY SSF51735 24 214 2.39E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SMART SM00357 140 204 8.8E-6 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SMART SM00357 75 135 1.9E-13 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SMART SM00316 628 710 6.1E-21 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Pfam PF08206 Ribonuclease B OB domain 76 134 4.6E-24 T 01-11-2018 IPR013223 Ribonuclease B, N-terminal OB domain DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Pfam PF08206 Ribonuclease B OB domain 150 203 6.0E-10 T 01-11-2018 IPR013223 Ribonuclease B, N-terminal OB domain DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Hamap MF_01895 Ribonuclease R [rnr]. 27 710 61.548 T 01-11-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SUPERFAMILY SSF50249 57 137 3.13E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 60 710 1.7E-253 T 01-11-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SUPERFAMILY SSF50249 628 708 3.06E-24 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 ProSitePatterns PS01175 Ribonuclease II family signature. 547 571 - T 01-11-2018 IPR022966 Ribonuclease II/R, conserved site DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Pfam PF00575 S1 RNA binding domain 628 709 3.0E-17 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SUPERFAMILY SSF50249 210 627 1.6E-148 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Gene3D G3DSA:2.40.50.140 631 739 6.3E-27 T 01-11-2018 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SUPERFAMILY SSF50249 128 225 2.49E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Pfam PF00773 RNB domain 250 578 7.1E-116 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 TIGRFAM TIGR02063 RNase_R: ribonuclease R 10 710 1.6E-290 T 01-11-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Gene3D G3DSA:2.40.50.140 139 205 6.6E-10 T 01-11-2018 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 Gene3D G3DSA:2.40.50.140 61 137 4.6E-20 T 01-11-2018 DOE78_22045 a6d1ed5c4649b147f204fb3e33792500 784 SMART SM00955 250 580 5.4E-183 T 01-11-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DOE78_23980 7f10a70c4c2d5c129db3fb01733b302c 140 Gene3D G3DSA:1.10.10.2520 8 92 3.9E-9 T 01-11-2018 DOE78_23980 7f10a70c4c2d5c129db3fb01733b302c 140 Pfam PF07486 Cell Wall Hydrolase 24 129 2.2E-15 T 01-11-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DOE78_15135 be781ecb2b7ff5d5863612bd432247ce 208 Pfam PF01810 LysE type translocator 12 199 3.8E-40 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_04020 616f95a5b09729d8452bcf49b2439889 348 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 01-11-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DOE78_04020 616f95a5b09729d8452bcf49b2439889 348 Gene3D G3DSA:2.70.98.10 6 348 4.9E-116 T 01-11-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DOE78_04020 616f95a5b09729d8452bcf49b2439889 348 Pfam PF01263 Aldose 1-epimerase 19 342 1.4E-89 T 01-11-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DOE78_04020 616f95a5b09729d8452bcf49b2439889 348 SUPERFAMILY SSF74650 9 345 8.16E-111 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_04020 616f95a5b09729d8452bcf49b2439889 348 PIRSF PIRSF005096 1 348 6.1E-131 T 01-11-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 SMART SM00382 168 362 2.4E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 SUPERFAMILY SSF50249 51 114 3.43E-7 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 Pfam PF07497 Rho termination factor, RNA-binding domain 53 126 8.8E-31 T 01-11-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 SUPERFAMILY SSF52540 91 369 1.26E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 SMART SM00959 7 49 4.4E-16 T 01-11-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 413 2.0E-204 T 01-11-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 Gene3D G3DSA:1.10.720.10 1 47 3.2E-21 T 01-11-2018 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 Pfam PF07498 Rho termination factor, N-terminal domain 8 49 4.7E-15 T 01-11-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 Gene3D G3DSA:3.40.50.300 131 413 4.8E-122 T 01-11-2018 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 Gene3D G3DSA:2.40.50.140 48 124 5.8E-29 T 01-11-2018 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 SMART SM00357 54 119 1.8E-19 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 361 1.1E-17 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 SUPERFAMILY SSF68912 4 48 1.37E-10 T 01-11-2018 IPR036269 Rho termination factor, N-terminal domain superfamily DOE78_23810 ea8262c41d157b0909971ea5f6f5319e 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 415 222.479 T 01-11-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DOE78_14995 37f8a1b92fc263a39e08b98b526cf31a 223 SUPERFAMILY SSF55729 14 96 3.8E-6 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_14995 37f8a1b92fc263a39e08b98b526cf31a 223 Gene3D G3DSA:3.40.630.30 1 79 7.1E-7 T 01-11-2018 DOE78_20420 26c592d8e17332ca66b3390d54a53b38 301 Pfam PF01757 Acyltransferase family 13 263 1.0E-15 T 01-11-2018 IPR002656 Acyltransferase 3 GO:0016747 DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 Gene3D G3DSA:3.40.50.360 249 403 4.8E-32 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 SUPERFAMILY SSF56281 11 282 2.57E-46 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 Gene3D G3DSA:3.60.15.10 1 242 7.8E-82 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 PIRSF PIRSF005243 1 407 9.4E-124 T 01-11-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 Pfam PF00258 Flavodoxin 252 357 3.3E-7 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 SUPERFAMILY SSF52218 247 364 5.74E-30 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 SMART SM00849 33 222 9.9E-22 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_04215 77b7518bc7d8733a8534dfa85d8cf752 409 Pfam PF00753 Metallo-beta-lactamase superfamily 34 166 4.1E-7 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 115 126 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 159 169 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 Gene3D G3DSA:3.50.30.30 282 408 2.0E-29 T 01-11-2018 DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 SUPERFAMILY SSF52025 303 389 8.24E-17 T 01-11-2018 DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 PRINTS PR00723 Subtilisin serine protease family (S8) signature 110 129 1.7E-21 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 PRINTS PR00723 Subtilisin serine protease family (S8) signature 155 168 1.7E-21 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 PRINTS PR00723 Subtilisin serine protease family (S8) signature 445 461 1.7E-21 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 Pfam PF02225 PA domain 308 385 2.7E-16 T 01-11-2018 IPR003137 PA domain DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 Pfam PF00082 Subtilase family 110 500 8.1E-70 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 446 456 - T 01-11-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DOE78_23725 b522c27f049915da6eb3f9ce849bef12 719 SUPERFAMILY SSF52743 105 509 2.75E-85 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_24545 1f7cdb8490b490f4bf622813f7750a9b 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 31.2 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DOE78_24545 1f7cdb8490b490f4bf622813f7750a9b 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 1.2E-59 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DOE78_24545 1f7cdb8490b490f4bf622813f7750a9b 159 SUPERFAMILY SSF75217 2 157 1.57E-60 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases DOE78_24545 1f7cdb8490b490f4bf622813f7750a9b 159 Gene3D G3DSA:3.40.1280.10 1 159 4.6E-67 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE78_24545 1f7cdb8490b490f4bf622813f7750a9b 159 PIRSF PIRSF004505 1 159 2.4E-54 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DOE78_24545 1f7cdb8490b490f4bf622813f7750a9b 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 159 4.6E-67 T 01-11-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DOE78_17230 8fc7e1f2106703e775c06af4639a4d55 403 Pfam PF07690 Major Facilitator Superfamily 21 337 1.7E-20 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_17230 8fc7e1f2106703e775c06af4639a4d55 403 Gene3D G3DSA:1.20.1250.20 14 397 4.3E-22 T 01-11-2018 DOE78_17230 8fc7e1f2106703e775c06af4639a4d55 403 SUPERFAMILY SSF103473 15 398 1.66E-29 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_17230 8fc7e1f2106703e775c06af4639a4d55 403 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_22155 a812fa440053b286702fb49e2012b600 493 SUPERFAMILY SSF48452 21 122 2.91E-15 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_22155 a812fa440053b286702fb49e2012b600 493 Gene3D G3DSA:1.25.40.10 148 326 3.2E-20 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_22155 a812fa440053b286702fb49e2012b600 493 Pfam PF05225 helix-turn-helix, Psq domain 449 487 2.1E-5 T 01-11-2018 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 DOE78_22155 a812fa440053b286702fb49e2012b600 493 Gene3D G3DSA:1.25.40.10 9 145 1.3E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_22155 a812fa440053b286702fb49e2012b600 493 SUPERFAMILY SSF48452 158 322 9.02E-19 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_22155 a812fa440053b286702fb49e2012b600 493 Pfam PF14559 Tetratricopeptide repeat 163 225 3.8E-7 T 01-11-2018 DOE78_22155 a812fa440053b286702fb49e2012b600 493 SMART SM00028 21 54 0.47 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_22155 a812fa440053b286702fb49e2012b600 493 SMART SM00028 90 123 180.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_22155 a812fa440053b286702fb49e2012b600 493 SMART SM00028 187 220 0.0013 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_22155 a812fa440053b286702fb49e2012b600 493 SMART SM00028 55 88 45.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_00560 0dada92d60695197a229c6bf3fa2f901 354 Gene3D G3DSA:3.30.590.10 8 265 7.5E-76 T 01-11-2018 DOE78_00560 0dada92d60695197a229c6bf3fa2f901 354 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 351 40.194 T 01-11-2018 IPR023660 Protein arginine kinase GO:0016775 DOE78_00560 0dada92d60695197a229c6bf3fa2f901 354 SUPERFAMILY SSF55931 4 269 1.6E-88 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DOE78_00560 0dada92d60695197a229c6bf3fa2f901 354 ProSitePatterns PS00112 Phosphagen kinase active site signature. 168 174 - T 01-11-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 DOE78_00560 0dada92d60695197a229c6bf3fa2f901 354 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 53 254 9.3E-75 T 01-11-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 DOE78_15625 cfc09c586a67d2dcd00875989622fca8 453 SUPERFAMILY SSF51338 4 448 3.13E-25 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_15625 cfc09c586a67d2dcd00875989622fca8 453 Gene3D G3DSA:2.30.40.10 6 432 1.5E-136 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_15625 cfc09c586a67d2dcd00875989622fca8 453 SUPERFAMILY SSF51556 56 379 1.42E-90 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_15625 cfc09c586a67d2dcd00875989622fca8 453 Pfam PF01979 Amidohydrolase family 52 402 1.4E-27 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_15625 cfc09c586a67d2dcd00875989622fca8 453 Hamap MF_01645 Allantoinase [allB]. 3 449 48.343 T 01-11-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 DOE78_15625 cfc09c586a67d2dcd00875989622fca8 453 Gene3D G3DSA:3.20.20.140 55 417 1.5E-136 T 01-11-2018 DOE78_15625 cfc09c586a67d2dcd00875989622fca8 453 TIGRFAM TIGR03178 allantoinase: allantoinase 5 440 2.3E-166 T 01-11-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 DOE78_17220 d4c4f05d9253c9bb1de41ab29e6659cf 324 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 4 307 1.5E-71 T 01-11-2018 IPR011862 Phosphate binding protein GO:0042301 DOE78_17220 d4c4f05d9253c9bb1de41ab29e6659cf 324 SUPERFAMILY SSF53850 45 321 1.3E-60 T 01-11-2018 DOE78_17220 d4c4f05d9253c9bb1de41ab29e6659cf 324 Pfam PF12849 PBP superfamily domain 39 296 1.2E-27 T 01-11-2018 IPR024370 PBP domain DOE78_17220 d4c4f05d9253c9bb1de41ab29e6659cf 324 Gene3D G3DSA:3.40.190.10 128 269 6.0E-67 T 01-11-2018 DOE78_17220 d4c4f05d9253c9bb1de41ab29e6659cf 324 Gene3D G3DSA:3.40.190.10 47 306 6.0E-67 T 01-11-2018 DOE78_19940 cede22132702f15c12ff174d5e6624f1 319 SUPERFAMILY SSF46689 19 60 2.87E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_19940 cede22132702f15c12ff174d5e6624f1 319 Gene3D G3DSA:3.40.50.1360 58 318 9.9E-88 T 01-11-2018 DOE78_19940 cede22132702f15c12ff174d5e6624f1 319 Pfam PF04198 Putative sugar-binding domain 61 315 3.6E-78 T 01-11-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DOE78_19940 cede22132702f15c12ff174d5e6624f1 319 SUPERFAMILY SSF100950 61 316 3.6E-74 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_19940 cede22132702f15c12ff174d5e6624f1 319 Pfam PF13412 Winged helix-turn-helix DNA-binding 23 54 5.8E-5 T 01-11-2018 DOE78_19940 cede22132702f15c12ff174d5e6624f1 319 Gene3D G3DSA:1.10.10.60 5 55 2.4E-21 T 01-11-2018 DOE78_17600 0df711ed60131b39c0917becfba77a78 44 SUPERFAMILY SSF100985 2 42 2.48E-15 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_17600 0df711ed60131b39c0917becfba77a78 44 Pfam PF08970 Sporulation inhibitor A 2 42 9.8E-21 T 01-11-2018 IPR015064 Sporulation inhibitor A DOE78_17600 0df711ed60131b39c0917becfba77a78 44 Gene3D G3DSA:1.10.287.1100 4 37 3.4E-19 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_20480 8de1e8f378d54fabee3697febf40c165 214 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 2 204 1.1E-69 T 01-11-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like DOE78_20480 8de1e8f378d54fabee3697febf40c165 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 164 192 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DOE78_20480 8de1e8f378d54fabee3697febf40c165 214 Gene3D G3DSA:3.40.50.20 1 83 7.4E-19 T 01-11-2018 DOE78_20480 8de1e8f378d54fabee3697febf40c165 214 SUPERFAMILY SSF51161 2 207 8.46E-48 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_20480 8de1e8f378d54fabee3697febf40c165 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 156 189 8.0E-8 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_20480 8de1e8f378d54fabee3697febf40c165 214 Gene3D G3DSA:2.160.10.10 84 211 1.4E-32 T 01-11-2018 DOE78_18605 b9dd0553b54f890356aa38f8110c064b 166 Gene3D G3DSA:3.40.30.10 1 164 1.3E-49 T 01-11-2018 DOE78_18605 b9dd0553b54f890356aa38f8110c064b 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 01-11-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 DOE78_18605 b9dd0553b54f890356aa38f8110c064b 166 SUPERFAMILY SSF52833 1 160 9.61E-46 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_18605 b9dd0553b54f890356aa38f8110c064b 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 38.528 T 01-11-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 DOE78_18605 b9dd0553b54f890356aa38f8110c064b 166 Pfam PF08534 Redoxin 19 158 1.2E-24 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 SUPERFAMILY SSF52374 5 317 6.97E-114 T 01-11-2018 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 485 34.093 T 01-11-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 Gene3D G3DSA:3.40.50.620 1 333 4.4E-144 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 SUPERFAMILY SSF48163 299 481 1.96E-42 T 01-11-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 Gene3D G3DSA:1.10.10.350 391 486 5.8E-29 T 01-11-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 324 4.5E-125 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.1E-29 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.1E-29 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 205 2.1E-29 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.1E-29 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 219 2.1E-29 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_00590 9ee03095edfd5bbe38a333f1eaa24649 486 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 482 1.2E-189 T 01-11-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DOE78_13830 36b058b8581a49b91ca20594c787ec3d 254 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 1 224 4.0E-82 T 01-11-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 DOE78_13830 36b058b8581a49b91ca20594c787ec3d 254 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 6 251 51.77 T 01-11-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 DOE78_13830 36b058b8581a49b91ca20594c787ec3d 254 TIGRFAM TIGR01204 bioW: 6-carboxyhexanoate--CoA ligase 20 251 4.8E-96 T 01-11-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 DOE78_13830 36b058b8581a49b91ca20594c787ec3d 254 Pfam PF03744 6-carboxyhexanoate--CoA ligase 7 250 4.0E-83 T 01-11-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 DOE78_23935 b843bab9f71ccf0f5459679b53fd0209 208 Pfam PF02163 Peptidase family M50 109 175 3.3E-9 T 01-11-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 Gene3D G3DSA:1.10.1060.10 2 125 5.2E-43 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 8 116 1.9E-40 T 01-11-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 129 429 3.1E-33 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 SUPERFAMILY SSF51971 127 373 7.06E-62 T 01-11-2018 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 Gene3D G3DSA:3.50.50.60 126 254 9.7E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 Gene3D G3DSA:3.50.50.60 256 449 2.4E-22 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 PRINTS PR00419 Adrenodoxin reductase family signature 152 165 6.9E-16 T 01-11-2018 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 PRINTS PR00419 Adrenodoxin reductase family signature 129 151 6.9E-16 T 01-11-2018 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 PRINTS PR00419 Adrenodoxin reductase family signature 194 204 6.9E-16 T 01-11-2018 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 PRINTS PR00419 Adrenodoxin reductase family signature 262 276 6.9E-16 T 01-11-2018 DOE78_13230 0654a7defd3af055de3cdb8247a96234 449 SUPERFAMILY SSF46548 5 138 6.28E-32 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_23210 6d441a3d876c11b54442aec8f8703469 371 Gene3D G3DSA:3.40.50.2000 205 355 3.6E-9 T 01-11-2018 DOE78_23210 6d441a3d876c11b54442aec8f8703469 371 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 264 334 1.8E-7 T 01-11-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DOE78_23210 6d441a3d876c11b54442aec8f8703469 371 SUPERFAMILY SSF53756 16 303 2.68E-12 T 01-11-2018 DOE78_23210 6d441a3d876c11b54442aec8f8703469 371 Pfam PF13528 Glycosyl transferase family 1 16 148 2.0E-6 T 01-11-2018 DOE78_23270 aadf4fccd6b7b30eed8fb5f972849cd9 199 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 154 182 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DOE78_23270 aadf4fccd6b7b30eed8fb5f972849cd9 199 Gene3D G3DSA:2.160.10.10 17 199 1.9E-39 T 01-11-2018 DOE78_23270 aadf4fccd6b7b30eed8fb5f972849cd9 199 SUPERFAMILY SSF51161 87 198 2.49E-30 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_23270 aadf4fccd6b7b30eed8fb5f972849cd9 199 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 180 2.3E-7 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_17405 eb8bf7f6e8081aff59e18518c92f2fa4 156 Pfam PF02130 Uncharacterized protein family UPF0054 15 152 3.4E-48 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DOE78_17405 eb8bf7f6e8081aff59e18518c92f2fa4 156 SUPERFAMILY SSF55486 3 155 7.69E-46 T 01-11-2018 DOE78_17405 eb8bf7f6e8081aff59e18518c92f2fa4 156 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 156 24.791 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DOE78_17405 eb8bf7f6e8081aff59e18518c92f2fa4 156 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 01-11-2018 IPR020549 Endoribonuclease YbeY, conserved site DOE78_17405 eb8bf7f6e8081aff59e18518c92f2fa4 156 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 153 5.3E-44 T 01-11-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DOE78_17405 eb8bf7f6e8081aff59e18518c92f2fa4 156 Gene3D G3DSA:3.40.390.30 1 156 7.8E-48 T 01-11-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DOE78_05015 9facbdabe2872cae3ee6177596e7428a 285 Gene3D G3DSA:1.10.10.10 1 77 1.7E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05015 9facbdabe2872cae3ee6177596e7428a 285 SUPERFAMILY SSF53697 101 276 1.53E-25 T 01-11-2018 DOE78_05015 9facbdabe2872cae3ee6177596e7428a 285 Gene3D G3DSA:3.40.50.10490 97 282 2.7E-31 T 01-11-2018 DOE78_05015 9facbdabe2872cae3ee6177596e7428a 285 Pfam PF01380 SIS domain 132 239 4.0E-19 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_05015 9facbdabe2872cae3ee6177596e7428a 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 74 2.6E-11 T 01-11-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DOE78_05015 9facbdabe2872cae3ee6177596e7428a 285 SUPERFAMILY SSF46689 5 79 3.4E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_14350 ac34904b3787845f007e829783948e7f 251 Gene3D G3DSA:3.60.10.10 1 249 4.4E-92 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE78_14350 ac34904b3787845f007e829783948e7f 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 242 2.6E-19 T 01-11-2018 IPR005135 Endonuclease/exonuclease/phosphatase DOE78_14350 ac34904b3787845f007e829783948e7f 251 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 249 1.0E-98 T 01-11-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DOE78_14350 ac34904b3787845f007e829783948e7f 251 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 248 6.3E-95 T 01-11-2018 DOE78_14350 ac34904b3787845f007e829783948e7f 251 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 01-11-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DOE78_14350 ac34904b3787845f007e829783948e7f 251 SUPERFAMILY SSF56219 1 250 7.46E-78 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE78_03840 f76371699c5a3430f46b17660b863645 512 PIRSF PIRSF000538 2 504 1.9E-134 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_03840 f76371699c5a3430f46b17660b863645 512 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 4 507 2.6E-281 T 01-11-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 DOE78_03840 f76371699c5a3430f46b17660b863645 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 451 5.1E-34 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DOE78_03840 f76371699c5a3430f46b17660b863645 512 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_03840 f76371699c5a3430f46b17660b863645 512 Gene3D G3DSA:3.30.420.40 1 247 9.4E-77 T 01-11-2018 DOE78_03840 f76371699c5a3430f46b17660b863645 512 SUPERFAMILY SSF53067 4 248 1.36E-62 T 01-11-2018 DOE78_03840 f76371699c5a3430f46b17660b863645 512 Gene3D G3DSA:3.30.420.40 248 511 2.5E-87 T 01-11-2018 DOE78_03840 f76371699c5a3430f46b17660b863645 512 SUPERFAMILY SSF53067 249 498 6.65E-65 T 01-11-2018 DOE78_03840 f76371699c5a3430f46b17660b863645 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 4.9E-77 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DOE78_10420 f3ee1a997dfa79fd0333b62faaadb484 332 SUPERFAMILY SSF56112 23 298 1.28E-44 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_10420 f3ee1a997dfa79fd0333b62faaadb484 332 Gene3D G3DSA:3.90.1200.10 124 320 1.4E-21 T 01-11-2018 DOE78_10420 f3ee1a997dfa79fd0333b62faaadb484 332 Pfam PF01636 Phosphotransferase enzyme family 50 262 3.3E-23 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_19625 4f43395dffd254ff5ec6a15dd81f7d6f 483 Pfam PF00534 Glycosyl transferases group 1 284 441 9.0E-15 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_19625 4f43395dffd254ff5ec6a15dd81f7d6f 483 SUPERFAMILY SSF53756 3 476 5.58E-132 T 01-11-2018 DOE78_19625 4f43395dffd254ff5ec6a15dd81f7d6f 483 Gene3D G3DSA:3.40.50.2000 3 472 5.8E-187 T 01-11-2018 DOE78_19625 4f43395dffd254ff5ec6a15dd81f7d6f 483 Pfam PF08323 Starch synthase catalytic domain 2 236 6.3E-87 T 01-11-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DOE78_19625 4f43395dffd254ff5ec6a15dd81f7d6f 483 Hamap MF_00484 Glycogen synthase [glgA]. 1 474 46.809 T 01-11-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DOE78_19625 4f43395dffd254ff5ec6a15dd81f7d6f 483 Gene3D G3DSA:3.40.50.2000 250 458 5.8E-187 T 01-11-2018 DOE78_19625 4f43395dffd254ff5ec6a15dd81f7d6f 483 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 474 7.1E-176 T 01-11-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DOE78_22385 ef010f00f0426f32841c20089c2cba8e 139 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 134 2.0E-23 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I DOE78_22385 ef010f00f0426f32841c20089c2cba8e 139 SUPERFAMILY SSF52788 4 136 1.96E-45 T 01-11-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DOE78_22385 ef010f00f0426f32841c20089c2cba8e 139 Gene3D G3DSA:3.40.50.2300 1 139 2.5E-59 T 01-11-2018 DOE78_22385 ef010f00f0426f32841c20089c2cba8e 139 SMART SM00226 4 137 9.9E-60 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I DOE78_22385 ef010f00f0426f32841c20089c2cba8e 139 Hamap MF_01624 Arsenate reductase [arsC]. 1 137 47.208 T 01-11-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 DOE78_22385 ef010f00f0426f32841c20089c2cba8e 139 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 6 134 1.7E-71 T 01-11-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 DOE78_11670 9019e6b37592134b5bf86cec400b9c37 322 SUPERFAMILY SSF52518 15 180 7.7E-39 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_11670 9019e6b37592134b5bf86cec400b9c37 322 SMART SM00861 14 179 6.6E-30 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_11670 9019e6b37592134b5bf86cec400b9c37 322 SUPERFAMILY SSF52922 185 320 6.54E-37 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_11670 9019e6b37592134b5bf86cec400b9c37 322 Gene3D G3DSA:3.40.50.920 191 321 2.7E-40 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_11670 9019e6b37592134b5bf86cec400b9c37 322 Pfam PF02780 Transketolase, C-terminal domain 191 312 2.0E-33 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_11670 9019e6b37592134b5bf86cec400b9c37 322 Gene3D G3DSA:3.40.50.970 12 189 5.0E-48 T 01-11-2018 DOE78_11670 9019e6b37592134b5bf86cec400b9c37 322 Pfam PF02779 Transketolase, pyrimidine binding domain 17 175 3.1E-26 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 511 1.8E-230 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 SUPERFAMILY SSF52335 2 193 1.57E-70 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 PIRSF PIRSF000414 1 511 1.6E-213 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 445 6.1E-120 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 Gene3D G3DSA:3.40.140.20 379 511 1.8E-55 T 01-11-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 Pfam PF02142 MGS-like domain 14 129 2.7E-30 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 SMART SM00851 14 129 2.8E-55 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 Gene3D G3DSA:3.40.140.20 203 360 4.3E-61 T 01-11-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 SUPERFAMILY SSF53927 207 511 3.61E-126 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 511 44.694 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 Gene3D G3DSA:3.40.50.1380 1 197 6.6E-87 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DOE78_01875 d16e9f02f5f449a57f7f95513204971a 511 SMART SM00798 134 446 3.7E-195 T 01-11-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_22220 2627b1366adfd21e19011774477ca006 312 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 42.067 T 01-11-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DOE78_22220 2627b1366adfd21e19011774477ca006 312 Gene3D G3DSA:3.40.50.300 131 312 5.9E-76 T 01-11-2018 DOE78_22220 2627b1366adfd21e19011774477ca006 312 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 301 1.5E-117 T 01-11-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DOE78_22220 2627b1366adfd21e19011774477ca006 312 Pfam PF02603 HPr Serine kinase N terminus 4 127 1.0E-39 T 01-11-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DOE78_22220 2627b1366adfd21e19011774477ca006 312 SUPERFAMILY SSF53795 132 298 6.1E-42 T 01-11-2018 DOE78_22220 2627b1366adfd21e19011774477ca006 312 Gene3D G3DSA:3.40.1390.20 3 130 1.3E-42 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE78_22220 2627b1366adfd21e19011774477ca006 312 SUPERFAMILY SSF75138 3 131 1.7E-38 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE78_22220 2627b1366adfd21e19011774477ca006 312 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 5.4E-78 T 01-11-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DOE78_22820 656a7de37a470b657ffb53c7553a283b 359 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 208 4.5E-11 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_22820 656a7de37a470b657ffb53c7553a283b 359 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 122 5.5E-25 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_22820 656a7de37a470b657ffb53c7553a283b 359 Gene3D G3DSA:3.40.50.720 3 318 4.3E-99 T 01-11-2018 DOE78_22820 656a7de37a470b657ffb53c7553a283b 359 SUPERFAMILY SSF55347 131 315 2.13E-33 T 01-11-2018 DOE78_22820 656a7de37a470b657ffb53c7553a283b 359 Gene3D G3DSA:3.30.360.10 132 337 4.3E-99 T 01-11-2018 DOE78_22820 656a7de37a470b657ffb53c7553a283b 359 SUPERFAMILY SSF51735 3 199 4.23E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 145 207 1.2E-25 T 01-11-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 Pfam PF10531 SLBB domain 66 110 2.3E-11 T 01-11-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 Gene3D G3DSA:1.10.150.280 141 208 4.4E-23 T 01-11-2018 DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 Gene3D G3DSA:3.10.20.600 58 140 6.5E-5 T 01-11-2018 DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 Pfam PF12836 Helix-hairpin-helix motif 144 205 9.0E-24 T 01-11-2018 DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 SUPERFAMILY SSF47781 135 207 1.45E-29 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 SMART SM00278 185 204 700.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_17550 107d898cea4197080fc5b22027c5e54f 208 SMART SM00278 155 174 0.0014 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 Gene3D G3DSA:3.40.50.2300 2 137 1.7E-33 T 01-11-2018 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 SMART SM00342 440 523 3.3E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 Pfam PF12833 Helix-turn-helix domain 447 524 1.1E-18 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 SUPERFAMILY SSF46689 424 474 8.6E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 Gene3D G3DSA:1.10.10.60 421 477 2.5E-15 T 01-11-2018 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 Gene3D G3DSA:1.10.10.2730 478 523 9.4E-22 T 01-11-2018 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 SUPERFAMILY SSF52172 3 134 2.13E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 507 523 1.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 492 507 1.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 477 519 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 Pfam PF00072 Response regulator receiver domain 3 115 2.8E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 SUPERFAMILY SSF46689 476 525 7.17E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_23450 96023535acca75cb4bf18315ce23c9fd 530 SMART SM00448 1 115 2.1E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_23890 8dba17d0f7d61952b04f41be5c61599f 318 Pfam PF03851 UV-endonuclease UvdE 5 272 3.2E-101 T 01-11-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 DOE78_23890 8dba17d0f7d61952b04f41be5c61599f 318 Gene3D G3DSA:3.20.20.150 2 307 5.6E-93 T 01-11-2018 DOE78_23890 8dba17d0f7d61952b04f41be5c61599f 318 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 301 3.2E-105 T 01-11-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 DOE78_23890 8dba17d0f7d61952b04f41be5c61599f 318 SUPERFAMILY SSF51658 72 252 3.25E-14 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_20710 0e7c34726a7698354adb242d50578d0b 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 375.676 T 01-11-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DOE78_20710 0e7c34726a7698354adb242d50578d0b 725 Gene3D G3DSA:3.20.20.360 8 578 4.0E-273 T 01-11-2018 DOE78_20710 0e7c34726a7698354adb242d50578d0b 725 Pfam PF01274 Malate synthase 18 695 3.5E-173 T 01-11-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DOE78_20710 0e7c34726a7698354adb242d50578d0b 725 SUPERFAMILY SSF51645 4 720 2.62E-300 T 01-11-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DOE78_20710 0e7c34726a7698354adb242d50578d0b 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 720 0.0 T 01-11-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DOE78_20710 0e7c34726a7698354adb242d50578d0b 725 Gene3D G3DSA:1.20.1220.12 581 725 9.7E-74 T 01-11-2018 DOE78_20710 0e7c34726a7698354adb242d50578d0b 725 Gene3D G3DSA:2.170.170.11 133 262 4.0E-273 T 01-11-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 157 315 3.8E-26 T 01-11-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 SUPERFAMILY SSF55347 148 312 1.24E-54 T 01-11-2018 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 Gene3D G3DSA:3.40.50.720 2 330 8.7E-125 T 01-11-2018 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 143 159 - T 01-11-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 338 42.047 T 01-11-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 SUPERFAMILY SSF51735 2 176 4.02E-44 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 139 1.6E-30 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 Gene3D G3DSA:3.30.360.10 146 312 8.7E-125 T 01-11-2018 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 SMART SM00859 2 140 1.7E-41 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DOE78_06465 0b657a5ee067c5263a5b5539ce8a0854 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 344 2.1E-135 T 01-11-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 319 51.241 T 01-11-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 Gene3D G3DSA:3.40.50.2020 13 307 1.5E-127 T 01-11-2018 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 9.0E-52 T 01-11-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 319 1.1E-127 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 SUPERFAMILY SSF53271 75 310 2.02E-64 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 Gene3D G3DSA:3.40.50.2020 153 295 1.5E-127 T 01-11-2018 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 SMART SM01400 10 126 1.7E-81 T 01-11-2018 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 209 318 3.4E-28 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DOE78_00310 b7e20ca3f8a62b680f81eee2e6532d6c 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 01-11-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DOE78_11330 d72a59579f33a4ebd19fedeb6f21c756 294 SUPERFAMILY SSF51735 1 293 1.58E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11330 d72a59579f33a4ebd19fedeb6f21c756 294 Pfam PF08338 Domain of unknown function (DUF1731) 244 292 4.2E-13 T 01-11-2018 IPR013549 Domain of unknown function DUF1731 DOE78_11330 d72a59579f33a4ebd19fedeb6f21c756 294 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 215 4.1E-14 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_11330 d72a59579f33a4ebd19fedeb6f21c756 294 Gene3D G3DSA:3.40.50.720 1 283 9.3E-65 T 01-11-2018 DOE78_11330 d72a59579f33a4ebd19fedeb6f21c756 294 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 289 3.2E-86 T 01-11-2018 IPR010099 Epimerase family protein SDR39U1 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 346 362 8.1E-15 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 386 400 8.1E-15 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 181 193 8.1E-15 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 210 8.1E-15 T 01-11-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 2 431 41.88 T 01-11-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 Pfam PF00152 tRNA synthetases class II (D, K and N) 112 425 7.9E-85 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 3 430 1.6E-166 T 01-11-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 SUPERFAMILY SSF50249 10 103 4.19E-24 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 Gene3D G3DSA:2.40.50.140 1 101 7.8E-24 T 01-11-2018 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 Pfam PF01336 OB-fold nucleic acid binding domain 17 95 5.0E-16 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 SUPERFAMILY SSF55681 111 425 3.38E-98 T 01-11-2018 DOE78_15910 e6c1a6440f92550cdb1ecce8f4ed2108 431 Gene3D G3DSA:3.30.930.10 102 431 3.2E-118 T 01-11-2018 DOE78_03930 c8c024d6134b0c53984de7a5907a66a9 265 Pfam PF01497 Periplasmic binding protein 5 233 4.1E-35 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain DOE78_03930 c8c024d6134b0c53984de7a5907a66a9 265 Gene3D G3DSA:3.40.50.1980 2 119 3.8E-26 T 01-11-2018 DOE78_03930 c8c024d6134b0c53984de7a5907a66a9 265 SUPERFAMILY SSF53807 2 256 1.57E-56 T 01-11-2018 DOE78_03930 c8c024d6134b0c53984de7a5907a66a9 265 Gene3D G3DSA:3.40.50.1980 123 256 5.6E-27 T 01-11-2018 DOE78_20000 c395c931e66ff8b7b81f19c31b0f31b0 118 Gene3D G3DSA:2.40.33.40 1 118 1.2E-32 T 01-11-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DOE78_20000 c395c931e66ff8b7b81f19c31b0f31b0 118 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 116 3.0E-28 T 01-11-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DOE78_20000 c395c931e66ff8b7b81f19c31b0f31b0 118 SUPERFAMILY SSF141530 2 117 9.15E-32 T 01-11-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DOE78_20000 c395c931e66ff8b7b81f19c31b0f31b0 118 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 3 115 3.7E-33 T 01-11-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DOE78_13960 a1c1d2dbf7310b7ea8c79d80b8bc1dbd 585 Gene3D G3DSA:3.30.565.10 459 585 9.6E-13 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13960 a1c1d2dbf7310b7ea8c79d80b8bc1dbd 585 Pfam PF06580 Histidine kinase 386 465 2.0E-23 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_13960 a1c1d2dbf7310b7ea8c79d80b8bc1dbd 585 SMART SM00304 322 374 1.2E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_13960 a1c1d2dbf7310b7ea8c79d80b8bc1dbd 585 SUPERFAMILY SSF55874 441 585 2.1E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13960 a1c1d2dbf7310b7ea8c79d80b8bc1dbd 585 Gene3D G3DSA:1.10.287.130 319 454 4.3E-6 T 01-11-2018 DOE78_16740 8c65508215385c89d09e7863f8257456 726 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 589 717 8.7E-60 T 01-11-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16740 8c65508215385c89d09e7863f8257456 726 SUPERFAMILY SSF51703 13 552 7.06E-220 T 01-11-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16740 8c65508215385c89d09e7863f8257456 726 SUPERFAMILY SSF52242 556 719 2.09E-59 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_16740 8c65508215385c89d09e7863f8257456 726 Pfam PF02310 B12 binding domain 592 702 1.0E-13 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_16740 8c65508215385c89d09e7863f8257456 726 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 379 404 - T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16740 8c65508215385c89d09e7863f8257456 726 Gene3D G3DSA:3.20.20.240 36 552 9.4E-236 T 01-11-2018 DOE78_16740 8c65508215385c89d09e7863f8257456 726 Gene3D G3DSA:3.40.50.280 556 719 2.1E-54 T 01-11-2018 DOE78_16740 8c65508215385c89d09e7863f8257456 726 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 36 555 8.2E-270 T 01-11-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16740 8c65508215385c89d09e7863f8257456 726 Pfam PF01642 Methylmalonyl-CoA mutase 37 550 2.1E-234 T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_06765 cac59fa2eb947b2bec9480374348f4c3 140 Gene3D G3DSA:3.40.630.30 1 139 6.1E-44 T 01-11-2018 DOE78_06765 cac59fa2eb947b2bec9480374348f4c3 140 Pfam PF13673 Acetyltransferase (GNAT) domain 25 139 2.0E-21 T 01-11-2018 IPR000182 GNAT domain DOE78_06765 cac59fa2eb947b2bec9480374348f4c3 140 SUPERFAMILY SSF55729 3 139 2.7E-37 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Gene3D G3DSA:2.60.40.10 5 124 1.8E-35 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 2 620 39.325 T 01-11-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 522 619 4.5E-24 T 01-11-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 13 618 7.9E-254 T 01-11-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Pfam PF00128 Alpha amylase, catalytic domain 179 251 1.6E-8 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Pfam PF00128 Alpha amylase, catalytic domain 263 469 1.5E-4 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Gene3D G3DSA:3.20.20.80 127 516 5.8E-148 T 01-11-2018 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 28 110 9.1E-19 T 01-11-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 SUPERFAMILY SSF81296 18 124 5.13E-18 T 01-11-2018 IPR014756 Immunoglobulin E-set DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 PIRSF PIRSF000463 3 630 1.1E-255 T 01-11-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 SUPERFAMILY SSF51445 88 510 1.06E-108 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 SUPERFAMILY SSF51011 518 620 6.84E-35 T 01-11-2018 DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 Gene3D G3DSA:2.60.40.1180 517 620 1.4E-36 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_19640 19d507f10958b028ee2bc8c4dda10756 645 SMART SM00642 154 497 1.1E-7 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23405 46ec501846384c1aeb3d7fe9bb4c3011 284 ProSitePatterns PS01125 ROK family signature. 128 153 - T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_23405 46ec501846384c1aeb3d7fe9bb4c3011 284 Pfam PF00480 ROK family 3 282 5.9E-77 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_23405 46ec501846384c1aeb3d7fe9bb4c3011 284 SUPERFAMILY SSF53067 2 283 1.19E-52 T 01-11-2018 DOE78_23405 46ec501846384c1aeb3d7fe9bb4c3011 284 Gene3D G3DSA:3.30.420.40 1 102 2.2E-35 T 01-11-2018 DOE78_23405 46ec501846384c1aeb3d7fe9bb4c3011 284 Gene3D G3DSA:3.30.420.40 103 284 6.8E-70 T 01-11-2018 DOE78_02875 901d5876000e2cf7014bd55f691ccdc0 348 Pfam PF00268 Ribonucleotide reductase, small chain 33 307 7.0E-73 T 01-11-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02875 901d5876000e2cf7014bd55f691ccdc0 348 PIRSF PIRSF000355 4 348 3.8E-103 T 01-11-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02875 901d5876000e2cf7014bd55f691ccdc0 348 SUPERFAMILY SSF47240 24 348 1.44E-84 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_02875 901d5876000e2cf7014bd55f691ccdc0 348 Gene3D G3DSA:1.10.620.20 28 316 5.6E-86 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 SUPERFAMILY SSF52402 192 410 2.43E-61 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 Gene3D G3DSA:3.30.300.10 398 517 3.7E-51 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 Pfam PF02540 NAD synthase 219 288 2.7E-6 T 01-11-2018 IPR022310 NAD/GMP synthase DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 57 66 9.6E-8 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 84 95 9.6E-8 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 9.6E-8 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 SUPERFAMILY SSF54810 397 517 3.79E-50 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 Gene3D G3DSA:3.40.50.620 205 397 3.2E-75 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 13 199 1.2E-82 T 01-11-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 SUPERFAMILY SSF52317 11 205 3.93E-59 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 10 517 54.974 T 01-11-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00097 Anthranilate synthase component II signature 84 95 1.0E-5 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00097 Anthranilate synthase component II signature 57 66 1.0E-5 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00097 Anthranilate synthase component II signature 172 185 1.0E-5 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 13 27 8.8E-6 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 54 68 8.8E-6 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 84 100 8.8E-6 T 01-11-2018 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 Pfam PF00958 GMP synthase C terminal domain 426 516 9.0E-45 T 01-11-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 Pfam PF00117 Glutamine amidotransferase class-I 14 194 2.6E-44 T 01-11-2018 IPR017926 Glutamine amidotransferase DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 Gene3D G3DSA:3.40.50.880 10 204 1.1E-56 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_01780 04f35b14fafad66da7fc800c5794cd38 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 207 517 4.2E-156 T 01-11-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 SUPERFAMILY SSF47384 315 386 1.75E-14 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 Gene3D G3DSA:1.10.287.130 308 386 2.1E-18 T 01-11-2018 DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 Gene3D G3DSA:3.30.565.10 390 536 7.6E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 SMART SM00387 430 536 7.3E-32 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 3.4E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 3.4E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 3.4E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 SUPERFAMILY SSF55874 387 534 3.01E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 SMART SM00388 322 388 3.2E-17 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 534 1.1E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_15505 b94a3fad79393d7dd2075246a33938a0 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 324 386 1.1E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 SUPERFAMILY SSF52540 101 313 7.74E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 108 345 3.7E-85 T 01-11-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 Hamap MF_02040 Iron-sulfur cluster carrier protein. 98 346 33.845 T 01-11-2018 IPR019591 Mrp/NBP35 ATP-binding protein DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 Pfam PF01883 Iron-sulfur cluster assembly protein 4 60 2.7E-5 T 01-11-2018 IPR002744 MIP18 family-like DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 ProSitePatterns PS01215 Mrp family signature. 211 227 - T 01-11-2018 IPR000808 Mrp, conserved site GO:0005524 DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 Gene3D G3DSA:3.40.50.300 102 324 8.6E-67 T 01-11-2018 DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 Gene3D G3DSA:3.30.300.130 1 96 9.9E-6 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily DOE78_00915 6a8575f612f98b3b253626c1eb4942e7 351 SUPERFAMILY SSF117916 2 81 1.41E-5 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily DOE78_17200 65793b365fda9e154a45a9fcd0c03094 219 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 6 214 4.6E-59 T 01-11-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DOE78_17200 65793b365fda9e154a45a9fcd0c03094 219 Pfam PF01895 PhoU domain 18 105 6.4E-20 T 01-11-2018 IPR026022 PhoU domain DOE78_17200 65793b365fda9e154a45a9fcd0c03094 219 Pfam PF01895 PhoU domain 121 205 4.0E-19 T 01-11-2018 IPR026022 PhoU domain DOE78_17200 65793b365fda9e154a45a9fcd0c03094 219 SUPERFAMILY SSF109755 4 218 4.6E-64 T 01-11-2018 DOE78_17200 65793b365fda9e154a45a9fcd0c03094 219 Gene3D G3DSA:1.20.58.220 3 219 2.8E-71 T 01-11-2018 IPR038078 PhoU-like domain superfamily DOE78_17200 65793b365fda9e154a45a9fcd0c03094 219 PIRSF PIRSF003107 1 219 3.6E-63 T 01-11-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 475 2.7E-12 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 Gene3D G3DSA:3.30.565.10 324 478 2.3E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 Pfam PF00672 HAMP domain 200 246 6.6E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 Gene3D G3DSA:1.20.1480.50 161 257 4.7E-17 T 01-11-2018 DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 SMART SM00304 198 250 6.2E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 SUPERFAMILY SSF158472 200 249 7.98E-12 T 01-11-2018 DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 Pfam PF06580 Histidine kinase 273 351 1.3E-23 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 SUPERFAMILY SSF55874 329 472 4.45E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_04180 e8b56be404d61e3f8389bd9f6c60f2f3 480 SMART SM00387 366 476 3.2E-11 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 2.0E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 2.0E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 2.0E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 2.0E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 2.0E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 2.0E-67 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 1.1E-91 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 Pfam PF00813 FliP family 25 217 3.5E-83 T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 2.0E-24 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 2.0E-24 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 2.0E-24 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 2.0E-24 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 2.0E-24 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 2.0E-24 T 01-11-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DOE78_08245 b767d0b58e5b5814fad83267a3fa096d 221 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 01-11-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 326 1.4E-107 T 01-11-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 Gene3D G3DSA:3.40.50.1170 1 199 5.9E-68 T 01-11-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 PIRSF PIRSF001220 1 326 7.6E-92 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 PIRSF PIRSF500176 1 324 1.3E-95 T 01-11-2018 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 SUPERFAMILY SSF53774 1 328 2.36E-97 T 01-11-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 6.5E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 6.5E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 PRINTS PR00139 Asparaginase/glutaminase family signature 252 270 6.5E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 01-11-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 Gene3D G3DSA:3.40.50.40 200 331 7.2E-34 T 01-11-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 01-11-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 SMART SM00870 3 315 4.3E-112 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_10450 85a284209a5ad5bfd0317cfd6194c439 334 Pfam PF00710 Asparaginase, N-terminal 3 188 1.0E-62 T 01-11-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DOE78_00095 170fb174fee243af141845dfed6941ce 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 4.8E-34 T 01-11-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DOE78_00095 170fb174fee243af141845dfed6941ce 424 Gene3D G3DSA:3.30.930.10 106 424 2.2E-128 T 01-11-2018 DOE78_00095 170fb174fee243af141845dfed6941ce 424 Gene3D G3DSA:1.10.287.40 1 105 1.2E-27 T 01-11-2018 DOE78_00095 170fb174fee243af141845dfed6941ce 424 SUPERFAMILY SSF55681 117 422 1.47E-105 T 01-11-2018 DOE78_00095 170fb174fee243af141845dfed6941ce 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 399 3.1E-37 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00095 170fb174fee243af141845dfed6941ce 424 SUPERFAMILY SSF46589 1 113 7.32E-33 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DOE78_00095 170fb174fee243af141845dfed6941ce 424 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 3.3E-32 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_00095 170fb174fee243af141845dfed6941ce 424 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 3.3E-32 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_00095 170fb174fee243af141845dfed6941ce 424 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 3.3E-32 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_00095 170fb174fee243af141845dfed6941ce 424 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 3.3E-32 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_00095 170fb174fee243af141845dfed6941ce 424 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 3.3E-32 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_00095 170fb174fee243af141845dfed6941ce 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 44.389 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_00095 170fb174fee243af141845dfed6941ce 424 PIRSF PIRSF001529 1 424 2.9E-192 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_00095 170fb174fee243af141845dfed6941ce 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 6.2E-184 T 01-11-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Gene3D G3DSA:3.40.50.300 774 980 1.5E-52 T 01-11-2018 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Gene3D G3DSA:3.40.50.300 480 773 3.4E-54 T 01-11-2018 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 466 1.1E-80 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 SUPERFAMILY SSF52980 1032 1247 4.34E-41 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Gene3D G3DSA:3.40.50.300 5 211 1.3E-38 T 01-11-2018 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Gene3D G3DSA:3.40.50.300 261 479 1.2E-30 T 01-11-2018 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 11 1253 0.0 T 01-11-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Pfam PF13361 UvrD-like helicase C-terminal domain 477 898 1.2E-34 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1073 1244 1.2E-7 T 01-11-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 SUPERFAMILY SSF52540 3 906 4.11E-115 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Gene3D G3DSA:3.90.320.10 1012 1253 8.0E-78 T 01-11-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DOE78_06170 863970763b01c61ef6e8b81be811d6fc 1254 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 9 1253 19.81 T 01-11-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 57.571 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 Gene3D G3DSA:1.20.58.180 205 285 3.8E-34 T 01-11-2018 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 5.4E-147 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.8E-67 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.8E-67 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.8E-67 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.8E-67 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.8E-67 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.8E-67 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 288 2.5E-164 T 01-11-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 Gene3D G3DSA:3.30.930.10 1 204 7.2E-108 T 01-11-2018 DOE78_17375 0d0866dfd88a63724429429a5d6cff63 296 SUPERFAMILY SSF55681 1 280 2.49E-131 T 01-11-2018 DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 SUPERFAMILY SSF52172 3 130 5.27E-43 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 SMART SM00862 150 222 4.3E-26 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 Pfam PF00072 Response regulator receiver domain 7 116 2.3E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 SUPERFAMILY SSF46894 127 224 4.86E-27 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 Gene3D G3DSA:1.10.10.10 133 228 3.3E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 Gene3D G3DSA:3.40.50.2300 1 132 6.9E-40 T 01-11-2018 DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 SMART SM00448 5 115 5.6E-42 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_15305 fc5cc72659f7ccf3ccb3ccbb72134076 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 222 3.0E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PRINTS PR00775 90kDa heat shock protein signature 115 137 1.2E-54 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PRINTS PR00775 90kDa heat shock protein signature 72 89 1.2E-54 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PRINTS PR00775 90kDa heat shock protein signature 165 182 1.2E-54 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PRINTS PR00775 90kDa heat shock protein signature 23 45 1.2E-54 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PRINTS PR00775 90kDa heat shock protein signature 90 107 1.2E-54 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PRINTS PR00775 90kDa heat shock protein signature 2 22 1.2E-54 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PRINTS PR00775 90kDa heat shock protein signature 188 206 1.2E-54 T 01-11-2018 IPR020575 Heat shock protein Hsp90, N-terminal DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Gene3D G3DSA:3.40.50.11260 403 488 3.3E-27 T 01-11-2018 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Gene3D G3DSA:3.30.565.10 1 228 3.7E-73 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03020 f1fba83595ed153e726567f021ceac39 625 SUPERFAMILY SSF54211 236 488 6.9E-82 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 625 26.805 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 PIRSF PIRSF002583 1 625 6.0E-204 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Pfam PF00183 Hsp90 protein 184 229 8.4E-7 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Pfam PF00183 Hsp90 protein 220 624 2.6E-111 T 01-11-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 01-11-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 SUPERFAMILY SSF55874 1 210 3.01E-63 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03020 f1fba83595ed153e726567f021ceac39 625 SUPERFAMILY SSF110942 510 624 1.44E-29 T 01-11-2018 IPR037196 HSP90, C-terminal domain DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 148 6.5E-13 T 01-11-2018 DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Gene3D G3DSA:1.20.120.790 492 625 4.6E-36 T 01-11-2018 IPR037196 HSP90, C-terminal domain DOE78_03020 f1fba83595ed153e726567f021ceac39 625 Gene3D G3DSA:3.30.230.80 235 402 1.3E-55 T 01-11-2018 DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 SUPERFAMILY SSF47413 3 59 3.75E-18 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 SMART SM00354 1 71 1.7E-31 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 SUPERFAMILY SSF53822 61 325 6.67E-80 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 Gene3D G3DSA:1.10.260.40 3 59 3.4E-24 T 01-11-2018 DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 Gene3D G3DSA:3.40.50.2300 62 304 3.2E-81 T 01-11-2018 DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 Pfam PF13377 Periplasmic binding protein-like domain 164 324 4.2E-33 T 01-11-2018 DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-19 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_22785 ffa9eb7e305728a652576f6a32bce88e 329 Gene3D G3DSA:3.40.50.2300 156 284 3.2E-81 T 01-11-2018 DOE78_02940 170bc089528015c42bad15357a252ea7 270 Pfam PF01774 UreD urease accessory protein 44 246 1.3E-48 T 01-11-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DOE78_02940 170bc089528015c42bad15357a252ea7 270 Hamap MF_01384 Urease accessory protein UreD [ureD]. 3 257 25.051 T 01-11-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 Pfam PF00108 Thiolase, N-terminal domain 5 263 7.0E-96 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 SUPERFAMILY SSF53901 272 392 2.24E-37 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 Gene3D G3DSA:3.40.47.10 5 276 7.7E-144 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 Pfam PF02803 Thiolase, C-terminal domain 271 391 5.6E-44 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 SUPERFAMILY SSF53901 4 268 2.76E-82 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 2.1E-140 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 PIRSF PIRSF000429 1 394 1.7E-120 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_23875 c5e36eef324a2dfbaedc855e9ff30908 395 Gene3D G3DSA:3.40.47.10 126 390 7.7E-144 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_12435 e2d1a00dde554448fd3a3cc931330626 126 Gene3D G3DSA:3.40.50.1240 3 124 2.6E-19 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_12435 e2d1a00dde554448fd3a3cc931330626 126 SUPERFAMILY SSF53254 1 125 1.69E-21 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_12435 e2d1a00dde554448fd3a3cc931330626 126 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 105 1.2E-12 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_20030 cecf617edd45349a5d56584b469a928a 573 SUPERFAMILY SSF52091 442 537 1.63E-14 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_20030 cecf617edd45349a5d56584b469a928a 573 Pfam PF00916 Sulfate permease family 21 388 6.7E-102 T 01-11-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DOE78_20030 cecf617edd45349a5d56584b469a928a 573 Gene3D G3DSA:3.30.750.24 418 554 1.3E-23 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_20030 cecf617edd45349a5d56584b469a928a 573 TIGRFAM TIGR00815 sulP: sulfate permease 10 547 3.7E-133 T 01-11-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 DOE78_20030 cecf617edd45349a5d56584b469a928a 573 Pfam PF01740 STAS domain 440 547 8.3E-17 T 01-11-2018 IPR002645 STAS domain DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF03714 Bacterial pullanase-associated domain 313 401 1.5E-12 T 01-11-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF03714 Bacterial pullanase-associated domain 1327 1420 3.2E-11 T 01-11-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SMART SM00635 1240 1319 6.4E-8 T 01-11-2018 IPR003343 Bacterial Ig-like, group 2 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SMART SM00635 1156 1235 5.6E-7 T 01-11-2018 IPR003343 Bacterial Ig-like, group 2 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF49373 1157 1236 5.65E-10 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SMART SM01065 45 128 0.031 T 01-11-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SMART SM01065 144 222 0.21 T 01-11-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF51445 610 1054 1.89E-120 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.1080 1155 1238 2.7E-13 T 01-11-2018 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:3.20.20.80 612 1057 2.3E-177 T 01-11-2018 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.1180 1058 1147 2.6E-29 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 494 1124 1.8E-220 T 01-11-2018 IPR011840 Pullulanase, type I DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:3.20.20.80 1628 2017 8.1E-100 T 01-11-2018 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF81296 48 124 5.95E-10 T 01-11-2018 IPR014756 Immunoglobulin E-set DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF49373 1269 1320 9.89E-11 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF00128 Alpha amylase, catalytic domain 665 761 2.6E-9 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF00128 Alpha amylase, catalytic domain 1667 1984 1.3E-54 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF00128 Alpha amylase, catalytic domain 802 1006 5.4E-8 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.1130 408 493 4.7E-6 T 01-11-2018 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF02368 Bacterial Ig-like domain (group 2) 1243 1319 1.1E-11 T 01-11-2018 IPR003343 Bacterial Ig-like, group 2 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF02368 Bacterial Ig-like domain (group 2) 1157 1236 9.2E-9 T 01-11-2018 IPR003343 Bacterial Ig-like, group 2 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 48 120 3.9E-6 T 01-11-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 147 217 9.3E-10 T 01-11-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.10 494 611 4.8E-32 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 504 592 5.1E-17 T 01-11-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SMART SM00642 1638 2030 2.4E-71 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SMART SM00642 633 1048 2.0E-8 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF49452 1325 1391 2.98E-15 T 01-11-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF81296 144 218 2.8E-15 T 01-11-2018 IPR014756 Immunoglobulin E-set DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF51445 1628 2034 6.14E-78 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.1080 1239 1327 4.9E-13 T 01-11-2018 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF81296 496 612 1.14E-22 T 01-11-2018 IPR014756 Immunoglobulin E-set DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.10 134 222 5.0E-23 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.10 32 129 1.2E-14 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.1110 310 404 2.4E-17 T 01-11-2018 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 Gene3D G3DSA:2.60.40.1110 1328 1425 1.3E-15 T 01-11-2018 DOE78_23410 d3e9e661ee5661d6dbf312345a60c771 2428 SUPERFAMILY SSF49452 313 405 1.14E-14 T 01-11-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Pfam PF00679 Elongation factor G C-terminus 399 479 4.4E-24 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 SUPERFAMILY SSF52540 4 208 5.02E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 SUPERFAMILY SSF50447 154 301 1.68E-32 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Gene3D G3DSA:2.40.50.250 485 601 2.0E-128 T 01-11-2018 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 197 1.1E-56 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Gene3D G3DSA:3.30.70.240 391 484 2.0E-128 T 01-11-2018 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Pfam PF03144 Elongation factor Tu domain 2 221 291 3.6E-13 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.6E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.6E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.6E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.6E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.6E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Gene3D G3DSA:2.40.30.10 201 301 4.0E-33 T 01-11-2018 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 141 3.5E-23 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 SMART SM00838 397 485 2.6E-4 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 SUPERFAMILY SSF54980 400 515 2.93E-29 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 601 2.8E-289 T 01-11-2018 IPR006298 GTP-binding protein TypA GO:0005525 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 SUPERFAMILY SSF54980 304 389 3.6E-15 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Gene3D G3DSA:3.40.50.300 4 200 2.2E-67 T 01-11-2018 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Gene3D G3DSA:3.30.70.870 308 592 2.0E-128 T 01-11-2018 DOE78_07415 236fd777ebc645b90874f4f7a4583b5e 612 Pfam PF14492 Elongation Factor G, domain II 330 379 1.0E-6 T 01-11-2018 DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Pfam PF08448 PAS fold 13 126 4.1E-11 T 01-11-2018 IPR013656 PAS fold-4 DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 SUPERFAMILY SSF141868 475 722 9.02E-86 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 SUPERFAMILY SSF55781 121 291 1.81E-25 T 01-11-2018 DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 SMART SM00065 147 299 3.7E-15 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Gene3D G3DSA:3.30.450.20 3 126 1.6E-13 T 01-11-2018 DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 PIRSF PIRSF005925 1 725 2.4E-166 T 01-11-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 SMART SM00052 469 715 1.9E-109 T 01-11-2018 IPR001633 EAL domain DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 SUPERFAMILY SSF55073 307 461 3.84E-45 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 451 4.9E-45 T 01-11-2018 IPR000160 GGDEF domain DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 SUPERFAMILY SSF55785 7 123 7.42E-10 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Pfam PF00563 EAL domain 475 710 9.5E-74 T 01-11-2018 IPR001633 EAL domain DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Gene3D G3DSA:3.30.450.40 127 298 3.8E-23 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Gene3D G3DSA:3.20.20.450 472 723 2.6E-95 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 299 456 5.2E-39 T 01-11-2018 IPR000160 GGDEF domain DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Pfam PF13185 GAF domain 147 290 2.0E-14 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 Gene3D G3DSA:3.30.70.270 299 471 1.9E-54 T 01-11-2018 DOE78_10470 93c2a2f69c1780d24e28b0bf86f4a7e7 728 SMART SM00267 291 459 4.8E-56 T 01-11-2018 IPR000160 GGDEF domain DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Gene3D G3DSA:3.30.420.110 124 250 2.5E-15 T 01-11-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 SUPERFAMILY SSF52540 558 790 1.93E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 SUPERFAMILY SSF48334 256 554 6.54E-89 T 01-11-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 SUPERFAMILY SSF53150 114 269 5.89E-31 T 01-11-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Pfam PF05188 MutS domain II 125 242 1.1E-10 T 01-11-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Gene3D G3DSA:1.10.1420.10 390 526 3.0E-102 T 01-11-2018 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 SUPERFAMILY SSF55271 2 112 5.36E-41 T 01-11-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 PIRSF PIRSF037677 1 168 7.2E-30 T 01-11-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 PIRSF PIRSF037677 154 843 2.7E-135 T 01-11-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 854 25.499 T 01-11-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 SMART SM00533 273 582 7.1E-107 T 01-11-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Pfam PF00488 MutS domain V 603 789 1.3E-84 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 859 0.0 T 01-11-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Gene3D G3DSA:3.40.1170.10 1 117 8.8E-47 T 01-11-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 680 696 - T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Pfam PF05190 MutS family domain IV 418 509 1.8E-29 T 01-11-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Gene3D G3DSA:1.10.1420.10 255 551 3.0E-102 T 01-11-2018 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Gene3D G3DSA:3.40.50.300 560 862 3.1E-105 T 01-11-2018 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 SMART SM00534 599 786 4.4E-121 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Pfam PF05192 MutS domain III 261 550 2.6E-43 T 01-11-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DOE78_08605 51e8994254b1f2e848cabd162dbb0270 864 Pfam PF01624 MutS domain I 5 115 2.3E-44 T 01-11-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 1.4E-257 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 Gene3D G3DSA:3.40.50.300 94 371 2.2E-127 T 01-11-2018 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 SUPERFAMILY SSF50615 10 94 1.39E-30 T 01-11-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 SUPERFAMILY SSF52540 95 370 9.43E-97 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23690 800a2b0f661460463936b9224f8f812d 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 51.488 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 4.7E-21 T 01-11-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 Gene3D G3DSA:2.40.30.20 1 93 8.7E-37 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 SUPERFAMILY SSF47917 372 499 9.94E-48 T 01-11-2018 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 9.0E-73 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 PIRSF PIRSF039088 1 501 6.7E-251 T 01-11-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 Gene3D G3DSA:1.20.150.20 372 499 3.6E-51 T 01-11-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23690 800a2b0f661460463936b9224f8f812d 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 484 4.4E-46 T 01-11-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 SUPERFAMILY SSF55874 264 430 1.7E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24315 81f4a31414a206d38945c83bc111562d 430 SUPERFAMILY SSF47384 197 274 2.16E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 SMART SM00387 320 430 4.9E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_24315 81f4a31414a206d38945c83bc111562d 430 SMART SM00388 208 275 9.2E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 Gene3D G3DSA:1.10.287.130 205 275 1.8E-16 T 01-11-2018 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 274 9.6E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 429 9.1E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_24315 81f4a31414a206d38945c83bc111562d 430 Gene3D G3DSA:3.30.565.10 281 430 2.8E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24315 81f4a31414a206d38945c83bc111562d 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24315 81f4a31414a206d38945c83bc111562d 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 2.5E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_16910 6889254568098154bdc375c82766d5e8 181 Gene3D G3DSA:3.30.300.270 67 181 3.7E-32 T 01-11-2018 IPR038503 Stage III sporulation protein AH-like superfamily DOE78_16910 6889254568098154bdc375c82766d5e8 181 Pfam PF12685 SpoIIIAH-like protein 6 169 8.1E-28 T 01-11-2018 IPR024232 Stage III sporulation protein AH-like DOE78_09180 1b96ce72c832a2f03b3c451b7f3ab5b0 311 Gene3D G3DSA:3.20.20.140 3 309 2.7E-71 T 01-11-2018 DOE78_09180 1b96ce72c832a2f03b3c451b7f3ab5b0 311 Pfam PF04909 Amidohydrolase 3 300 8.7E-32 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_09180 1b96ce72c832a2f03b3c451b7f3ab5b0 311 SUPERFAMILY SSF51556 3 300 3.4E-60 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 Gene3D G3DSA:3.30.450.20 6 112 3.1E-13 T 01-11-2018 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 Pfam PF00989 PAS fold 14 68 6.1E-6 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 Gene3D G3DSA:1.10.8.60 320 398 2.7E-26 T 01-11-2018 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 Gene3D G3DSA:1.10.10.60 399 453 3.7E-14 T 01-11-2018 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 62 5.1E-6 T 01-11-2018 IPR000014 PAS domain DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 SUPERFAMILY SSF52540 146 392 2.53E-72 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 Gene3D G3DSA:3.40.50.300 133 319 4.3E-65 T 01-11-2018 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 SMART SM00091 11 77 4.1E-5 T 01-11-2018 IPR000014 PAS domain DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 SUPERFAMILY SSF55785 12 105 3.14E-12 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 9.4E-7 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 453 9.4E-7 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 Pfam PF00158 Sigma-54 interaction domain 147 314 9.8E-71 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 Pfam PF02954 Bacterial regulatory protein, Fis family 410 450 1.0E-6 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 SMART SM00382 167 311 1.4E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_19410 21b77def6f4ceb9039d6968f20a9ceaf 453 SUPERFAMILY SSF46689 361 452 2.55E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 SMART SM00859 5 118 1.4E-9 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 Gene3D G3DSA:3.40.50.720 5 283 5.3E-128 T 01-11-2018 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 Gene3D G3DSA:3.30.360.10 126 264 5.3E-128 T 01-11-2018 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 PIRSF PIRSF015689 1 293 1.5E-135 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 294 129.756 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 SUPERFAMILY SSF55347 126 265 6.54E-60 T 01-11-2018 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 289 6.0E-141 T 01-11-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 126 264 3.5E-64 T 01-11-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 115 6.7E-11 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DOE78_09225 892498c93e7fc0020a45b2e6fce5f6bd 294 SUPERFAMILY SSF51735 1 150 1.31E-29 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 572 9.9E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 SMART SM00388 363 426 2.7E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 1.4E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 553 1.4E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 1.4E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 1.4E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 SUPERFAMILY SSF55785 243 355 2.99E-17 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 SMART SM00387 468 573 1.8E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 SUPERFAMILY SSF47384 359 424 9.61E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 424 3.5E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 238 354 3.4E-18 T 01-11-2018 IPR000014 PAS domain DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 Gene3D G3DSA:1.10.287.130 351 425 2.7E-18 T 01-11-2018 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 SMART SM00086 306 348 0.0021 T 01-11-2018 IPR001610 PAC motif DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 Gene3D G3DSA:3.30.450.20 221 350 5.5E-21 T 01-11-2018 DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 SUPERFAMILY SSF55874 416 572 8.12E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 Pfam PF13426 PAS domain 243 347 5.8E-13 T 01-11-2018 IPR000014 PAS domain DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 Gene3D G3DSA:3.30.565.10 429 573 6.3E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10195 e247b91ac19f77881721df41dc1b9ba5 573 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 38 190 1.6E-20 T 01-11-2018 IPR025847 MEDS domain DOE78_11465 2306aec96a26d29e49da9ae69ca4a4bf 372 Gene3D G3DSA:3.40.640.10 13 261 3.2E-128 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_11465 2306aec96a26d29e49da9ae69ca4a4bf 372 Gene3D G3DSA:3.90.1150.10 3 369 3.2E-128 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_11465 2306aec96a26d29e49da9ae69ca4a4bf 372 PIRSF PIRSF005572 1 371 6.2E-108 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DOE78_11465 2306aec96a26d29e49da9ae69ca4a4bf 372 Pfam PF00266 Aminotransferase class-V 3 369 8.6E-71 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_11465 2306aec96a26d29e49da9ae69ca4a4bf 372 SUPERFAMILY SSF53383 1 369 4.49E-86 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_12455 9a02bfe83901c0f87945c8b963336a32 174 Pfam PF12867 DinB superfamily 12 150 1.1E-11 T 01-11-2018 IPR024775 DinB-like domain DOE78_12455 9a02bfe83901c0f87945c8b963336a32 174 Gene3D G3DSA:1.20.120.450 1 171 4.6E-46 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_12455 9a02bfe83901c0f87945c8b963336a32 174 SUPERFAMILY SSF109854 1 154 3.05E-30 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_08675 b103173acc34b59be11dd297cba9703d 104 Gene3D G3DSA:3.10.350.10 27 101 3.3E-7 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_18220 3768f4c1841ba8a9f901d3a643b51401 202 SUPERFAMILY SSF81343 4 202 4.97E-59 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18220 3768f4c1841ba8a9f901d3a643b51401 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 193 2.4E-12 T 01-11-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18220 3768f4c1841ba8a9f901d3a643b51401 202 PIRSF PIRSF000170 1 202 2.0E-101 T 01-11-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute DOE78_18220 3768f4c1841ba8a9f901d3a643b51401 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 6 201 4.6E-51 T 01-11-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit DOE78_18220 3768f4c1841ba8a9f901d3a643b51401 202 Gene3D G3DSA:1.20.1300.10 2 202 1.6E-46 T 01-11-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Gene3D G3DSA:3.40.50.1700 616 868 9.6E-37 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 SMART SM01217 902 974 2.8E-28 T 01-11-2018 IPR026891 Fibronectin type III-like domain DOE78_20185 cb2f24923763d476728374250b67d99d 1153 SUPERFAMILY SSF52279 440 869 1.01E-36 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 440 866 1.2E-40 T 01-11-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 108 290 9.3E-8 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Pfam PF03422 Carbohydrate binding module (family 6) 1031 1145 3.8E-9 T 01-11-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Gene3D G3DSA:3.40.50.1700 425 615 6.4E-14 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Gene3D G3DSA:2.60.120.260 999 1147 6.9E-21 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Gene3D G3DSA:3.20.20.300 89 403 4.7E-25 T 01-11-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Gene3D G3DSA:2.60.40.10 869 992 8.5E-31 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_20185 cb2f24923763d476728374250b67d99d 1153 Pfam PF14310 Fibronectin type III-like domain 902 974 1.3E-22 T 01-11-2018 IPR026891 Fibronectin type III-like domain DOE78_20185 cb2f24923763d476728374250b67d99d 1153 SMART SM00606 1013 1147 1.2E-4 T 01-11-2018 IPR006584 Cellulose binding, type IV GO:0030246 DOE78_20185 cb2f24923763d476728374250b67d99d 1153 SUPERFAMILY SSF49785 1032 1146 4.42E-7 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_20185 cb2f24923763d476728374250b67d99d 1153 SUPERFAMILY SSF51445 107 439 5.37E-21 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 SUPERFAMILY SSF53822 58 329 3.85E-39 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 Gene3D G3DSA:1.10.260.40 1 47 3.5E-18 T 01-11-2018 DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 Pfam PF13377 Periplasmic binding protein-like domain 161 329 1.1E-37 T 01-11-2018 DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 Gene3D G3DSA:3.40.50.2300 152 290 8.8E-39 T 01-11-2018 DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-16 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 SMART SM00354 1 68 5.7E-11 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 SUPERFAMILY SSF47413 3 52 2.89E-13 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_21820 ff9fd0b46629efad36df776c5bfa0682 330 Gene3D G3DSA:3.40.50.2300 109 306 8.8E-39 T 01-11-2018 DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.6E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 SUPERFAMILY SSF51735 6 257 8.41E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.4E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.4E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.4E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.4E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 Gene3D G3DSA:3.40.50.720 2 258 7.1E-80 T 01-11-2018 DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 256 4.7E-63 T 01-11-2018 DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 258 3.9E-109 T 01-11-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 DOE78_19400 615a68f6018763cd4075b745a2edd84a 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_06905 876c02426d96fe4ff71a4c62d9988753 256 PIRSF PIRSF005902 1 256 1.5E-45 T 01-11-2018 IPR001130 TatD family GO:0016788 DOE78_06905 876c02426d96fe4ff71a4c62d9988753 256 Gene3D G3DSA:3.20.20.140 2 256 2.8E-50 T 01-11-2018 DOE78_06905 876c02426d96fe4ff71a4c62d9988753 256 Pfam PF01026 TatD related DNase 5 254 1.9E-40 T 01-11-2018 IPR001130 TatD family GO:0016788 DOE78_06905 876c02426d96fe4ff71a4c62d9988753 256 SUPERFAMILY SSF51556 4 256 3.85E-44 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 387 498 4.7E-16 T 01-11-2018 IPR000014 PAS domain DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 255 370 4.9E-16 T 01-11-2018 IPR000014 PAS domain DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Pfam PF03707 Bacterial signalling protein N terminal repeat 53 106 1.9E-7 T 01-11-2018 IPR005330 MHYT domain DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SMART SM00387 613 719 1.5E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SMART SM00388 506 571 4.3E-18 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SUPERFAMILY SSF55785 389 488 1.92E-25 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Pfam PF13426 PAS domain 390 490 2.3E-13 T 01-11-2018 IPR000014 PAS domain DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Pfam PF13426 PAS domain 261 361 5.6E-14 T 01-11-2018 IPR000014 PAS domain DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SUPERFAMILY SSF55874 565 717 3.27E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SUPERFAMILY SSF55785 261 360 1.4E-28 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SMART SM00086 449 491 3.4E-9 T 01-11-2018 IPR001610 PAC motif DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SMART SM00086 321 363 3.4E-9 T 01-11-2018 IPR001610 PAC motif DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 697 5.2E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 664 5.2E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 678 5.2E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 716 5.2E-16 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Gene3D G3DSA:1.10.287.130 496 571 1.0E-19 T 01-11-2018 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Gene3D G3DSA:3.30.450.20 388 495 6.2E-29 T 01-11-2018 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Gene3D G3DSA:3.30.565.10 572 720 8.6E-46 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 614 717 1.3E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SMART SM00091 378 444 1.7 T 01-11-2018 IPR000014 PAS domain DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SMART SM00091 249 319 0.014 T 01-11-2018 IPR000014 PAS domain DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Gene3D G3DSA:3.30.450.20 247 387 6.9E-34 T 01-11-2018 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 SUPERFAMILY SSF47384 500 568 1.0E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_14455 021c1f3b4abcc9b0c2f3458b1a3e7377 720 Pfam PF00512 His Kinase A (phospho-acceptor) domain 507 567 1.5E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_22475 72b0a8549473b4fb83dccbca72659b80 485 Pfam PF00884 Sulfatase 372 465 2.7E-16 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DOE78_22475 72b0a8549473b4fb83dccbca72659b80 485 SUPERFAMILY SSF53649 221 482 5.23E-53 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_22475 72b0a8549473b4fb83dccbca72659b80 485 Gene3D G3DSA:3.40.720.10 320 485 5.4E-37 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_22475 72b0a8549473b4fb83dccbca72659b80 485 Gene3D G3DSA:3.40.720.10 204 319 3.2E-20 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_22475 72b0a8549473b4fb83dccbca72659b80 485 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 222 289 2.2E-17 T 01-11-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 DOE78_09920 fa3352aba4a5715ad924e41a1a943fd4 196 SMART SM00072 7 191 7.6E-12 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOE78_09920 fa3352aba4a5715ad924e41a1a943fd4 196 Gene3D G3DSA:3.40.50.300 12 182 1.9E-32 T 01-11-2018 DOE78_09920 fa3352aba4a5715ad924e41a1a943fd4 196 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 01-11-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DOE78_09920 fa3352aba4a5715ad924e41a1a943fd4 196 Gene3D G3DSA:3.30.63.10 38 97 1.9E-32 T 01-11-2018 DOE78_09920 fa3352aba4a5715ad924e41a1a943fd4 196 SUPERFAMILY SSF52540 7 186 1.78E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09920 fa3352aba4a5715ad924e41a1a943fd4 196 Pfam PF00625 Guanylate kinase 8 160 2.7E-20 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 SMART SM00388 200 266 2.9E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 SUPERFAMILY SSF47384 193 263 1.04E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 262 1.1E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 Gene3D G3DSA:1.10.287.130 203 260 5.8E-16 T 01-11-2018 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 SMART SM00387 307 413 9.0E-31 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 Gene3D G3DSA:3.30.565.10 261 411 5.4E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 410 6.3E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 2.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 2.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 2.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 2.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 SUPERFAMILY SSF55874 267 410 3.01E-38 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10675 26ae46c426507533cbcec3b7f4053e8b 413 Pfam PF07694 5TMR of 5TMR-LYT 36 179 8.0E-6 T 01-11-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DOE78_00120 cdf0bbfd8d303999f14d025ba13f825f 179 SUPERFAMILY SSF52499 7 171 5.89E-40 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DOE78_00120 cdf0bbfd8d303999f14d025ba13f825f 179 Pfam PF00857 Isochorismatase family 11 170 4.4E-27 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 DOE78_00120 cdf0bbfd8d303999f14d025ba13f825f 179 Gene3D G3DSA:3.40.50.850 4 175 3.9E-41 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DOE78_14570 8002455c198be21c92acc25f3f868d0d 232 PRINTS PR00701 60kDa inner membrane protein signature 99 122 1.4E-6 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DOE78_14570 8002455c198be21c92acc25f3f868d0d 232 PRINTS PR00701 60kDa inner membrane protein signature 182 205 1.4E-6 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DOE78_14570 8002455c198be21c92acc25f3f868d0d 232 Pfam PF02096 60Kd inner membrane protein 28 214 6.5E-51 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DOE78_14570 8002455c198be21c92acc25f3f868d0d 232 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 27 213 9.9E-56 T 01-11-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 6.0E-26 T 01-11-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 Gene3D G3DSA:3.30.1360.10 17 221 3.5E-89 T 01-11-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 SUPERFAMILY SSF56553 50 171 4.32E-44 T 01-11-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 152 2.2E-25 T 01-11-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 Gene3D G3DSA:1.10.150.20 237 314 1.7E-34 T 01-11-2018 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 4.7E-24 T 01-11-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 2.4E-29 T 01-11-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 SUPERFAMILY SSF47789 247 313 9.29E-25 T 01-11-2018 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 SMART SM00662 20 227 4.0E-106 T 01-11-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 Gene3D G3DSA:2.170.120.12 50 170 3.5E-89 T 01-11-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 SUPERFAMILY SSF55257 5 230 1.22E-32 T 01-11-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.361 T 01-11-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_00860 1f382c6e9e30e6db2c19330986b2e916 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 313 3.5E-126 T 01-11-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_19350 6796a87956da2ae472e36e1b19226ac7 390 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 385 1.2E-38 T 01-11-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 DOE78_01915 795ef121349d2cf22132caee26814934 668 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 01-11-2018 IPR018239 NAD-dependent DNA ligase, active site DOE78_01915 795ef121349d2cf22132caee26814934 668 Gene3D G3DSA:2.20.70.80 387 424 4.3E-11 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 Gene3D G3DSA:1.10.150.20 500 578 2.2E-27 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 314 7.5E-127 T 01-11-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DOE78_01915 795ef121349d2cf22132caee26814934 668 Gene3D G3DSA:3.30.470.90 74 313 2.9E-101 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 663 1.5E-14 T 01-11-2018 IPR001357 BRCT domain DOE78_01915 795ef121349d2cf22132caee26814934 668 SMART SM00292 592 668 1.1E-13 T 01-11-2018 IPR001357 BRCT domain DOE78_01915 795ef121349d2cf22132caee26814934 668 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 01-11-2018 IPR033136 NAD-dependent DNA ligase, conserved site DOE78_01915 795ef121349d2cf22132caee26814934 668 SMART SM00532 5 443 1.8E-276 T 01-11-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DOE78_01915 795ef121349d2cf22132caee26814934 668 SUPERFAMILY SSF50249 313 395 2.23E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_01915 795ef121349d2cf22132caee26814934 668 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 403 429 1.3E-10 T 01-11-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 393 1.5E-33 T 01-11-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 SUPERFAMILY SSF52113 593 667 4.42E-20 T 01-11-2018 IPR036420 BRCT domain superfamily DOE78_01915 795ef121349d2cf22132caee26814934 668 Gene3D G3DSA:3.40.50.10190 579 667 1.9E-27 T 01-11-2018 IPR036420 BRCT domain superfamily DOE78_01915 795ef121349d2cf22132caee26814934 668 Pfam PF14520 Helix-hairpin-helix domain 441 496 6.7E-5 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 Gene3D G3DSA:2.40.50.140 314 386 3.6E-30 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 SUPERFAMILY SSF56091 2 312 8.8E-122 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 PIRSF PIRSF001604 1 668 8.6E-262 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 Gene3D G3DSA:1.10.150.20 427 499 2.6E-31 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 662 3.8E-274 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 SUPERFAMILY SSF47781 399 580 3.52E-64 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_01915 795ef121349d2cf22132caee26814934 668 SMART SM00278 539 558 0.15 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 SMART SM00278 475 494 4.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 SMART SM00278 441 460 40.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 Pfam PF12826 Helix-hairpin-helix motif 505 568 3.2E-24 T 01-11-2018 DOE78_01915 795ef121349d2cf22132caee26814934 668 Hamap MF_01588 DNA ligase [ligA]. 4 666 53.741 T 01-11-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DOE78_01915 795ef121349d2cf22132caee26814934 668 Gene3D G3DSA:1.10.287.610 1 73 7.1E-28 T 01-11-2018 DOE78_11915 a4b9f53388e0ef76f002432710178dc7 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 265 8.7E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_11915 a4b9f53388e0ef76f002432710178dc7 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 375 565 2.7E-13 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_11915 a4b9f53388e0ef76f002432710178dc7 571 SUPERFAMILY SSF161098 15 279 1.96E-56 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11915 a4b9f53388e0ef76f002432710178dc7 571 SUPERFAMILY SSF161098 302 563 6.02E-41 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11915 a4b9f53388e0ef76f002432710178dc7 571 Gene3D G3DSA:1.10.3720.10 15 284 3.6E-62 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11915 a4b9f53388e0ef76f002432710178dc7 571 Gene3D G3DSA:1.10.3720.10 301 563 7.4E-38 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_16725 d07060ee9551239b490c744929ac73ba 334 Pfam PF06081 Aromatic acid exporter family member 1 3 143 9.5E-48 T 01-11-2018 IPR010343 Aromatic acid exporter family member 1 DOE78_16725 d07060ee9551239b490c744929ac73ba 334 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 147 311 1.1E-57 T 01-11-2018 IPR021062 Putative aromatic acid exporter, C-terminal DOE78_16725 d07060ee9551239b490c744929ac73ba 334 Gene3D G3DSA:1.20.120.940 142 314 5.2E-55 T 01-11-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily DOE78_03950 e7f0cb66678681cc43b324886429dc6a 354 SMART SM00631 47 313 1.3E-7 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_03950 e7f0cb66678681cc43b324886429dc6a 354 Pfam PF00246 Zinc carboxypeptidase 59 213 6.1E-19 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_03950 e7f0cb66678681cc43b324886429dc6a 354 SUPERFAMILY SSF53187 45 293 3.31E-35 T 01-11-2018 DOE78_03950 e7f0cb66678681cc43b324886429dc6a 354 Gene3D G3DSA:3.40.630.10 41 296 8.5E-33 T 01-11-2018 DOE78_03950 e7f0cb66678681cc43b324886429dc6a 354 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 93 115 - T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_18400 9bc2aea6179058f2d29df89daadc759d 201 Pfam PF01121 Dephospho-CoA kinase 3 183 4.2E-62 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DOE78_18400 9bc2aea6179058f2d29df89daadc759d 201 Gene3D G3DSA:3.40.50.300 1 200 8.8E-78 T 01-11-2018 DOE78_18400 9bc2aea6179058f2d29df89daadc759d 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 28.797 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DOE78_18400 9bc2aea6179058f2d29df89daadc759d 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 3.0E-61 T 01-11-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DOE78_18400 9bc2aea6179058f2d29df89daadc759d 201 SUPERFAMILY SSF52540 1 193 7.32E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_04680 142fe6cedb6b097e4e13767fb7a61a19 148 SUPERFAMILY SSF51197 2 147 9.89E-37 T 01-11-2018 DOE78_04680 142fe6cedb6b097e4e13767fb7a61a19 148 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 147 1.1E-30 T 01-11-2018 IPR004375 YhcH/YjgK/YiaL family DOE78_04680 142fe6cedb6b097e4e13767fb7a61a19 148 Pfam PF04074 Domain of unknown function (DUF386) 2 147 1.2E-39 T 01-11-2018 IPR004375 YhcH/YjgK/YiaL family DOE78_04680 142fe6cedb6b097e4e13767fb7a61a19 148 Gene3D G3DSA:2.60.120.370 1 148 1.6E-40 T 01-11-2018 IPR037012 YhcH/YjgK/YiaL superfamily DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 SMART SM00283 392 667 5.7E-59 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 Gene3D G3DSA:3.30.450.20 192 283 1.5E-39 T 01-11-2018 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 Gene3D G3DSA:1.10.287.950 399 667 6.0E-55 T 01-11-2018 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 SUPERFAMILY SSF58104 331 667 3.14E-62 T 01-11-2018 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 Pfam PF00672 HAMP domain 312 359 7.6E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 Gene3D G3DSA:1.10.8.500 310 362 1.4E-7 T 01-11-2018 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 457 620 3.7E-39 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 Pfam PF02743 Cache domain 36 272 4.6E-34 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 Gene3D G3DSA:3.30.450.20 107 191 1.5E-39 T 01-11-2018 DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 SUPERFAMILY SSF103190 109 198 1.77E-11 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_03285 f2aefd4aa291ba95119d70799adc8fbc 668 SMART SM00304 311 363 1.5E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_10760 920860a7a3a102c837bfd34e3608dd0a 188 SUPERFAMILY SSF55469 14 187 1.96E-50 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_10760 920860a7a3a102c837bfd34e3608dd0a 188 Pfam PF00881 Nitroreductase family 22 79 1.6E-15 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DOE78_10760 920860a7a3a102c837bfd34e3608dd0a 188 Gene3D G3DSA:3.40.109.10 5 188 1.1E-52 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 Gene3D G3DSA:3.40.30.10 1 103 2.9E-32 T 01-11-2018 DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 PIRSF PIRSF000077 1 103 6.5E-30 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 PRINTS PR00421 Thioredoxin family signature 19 27 2.4E-7 T 01-11-2018 DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 PRINTS PR00421 Thioredoxin family signature 67 78 2.4E-7 T 01-11-2018 DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 PRINTS PR00421 Thioredoxin family signature 27 36 2.4E-7 T 01-11-2018 DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 101 9.3E-29 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 SUPERFAMILY SSF52833 3 103 6.44E-34 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_10095 b1e8dc9aa1740a640395f287c52d7661 104 Pfam PF00085 Thioredoxin 3 100 4.4E-26 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 DOE78_07600 58ef1083cfe50b99e6525f763f8f76cb 260 Pfam PF01734 Patatin-like phospholipase 124 164 3.2E-9 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DOE78_07600 58ef1083cfe50b99e6525f763f8f76cb 260 Pfam PF01734 Patatin-like phospholipase 8 72 7.6E-11 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DOE78_07600 58ef1083cfe50b99e6525f763f8f76cb 260 Gene3D G3DSA:3.40.1090.20 123 178 3.0E-6 T 01-11-2018 DOE78_07600 58ef1083cfe50b99e6525f763f8f76cb 260 Gene3D G3DSA:3.40.1090.10 1 104 2.0E-26 T 01-11-2018 DOE78_07600 58ef1083cfe50b99e6525f763f8f76cb 260 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 01-11-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 DOE78_07600 58ef1083cfe50b99e6525f763f8f76cb 260 SUPERFAMILY SSF52151 1 251 8.89E-56 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE78_17325 86f40c7aeb5345183167b9fb731961f1 236 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 231 2.9E-73 T 01-11-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 DOE78_17325 86f40c7aeb5345183167b9fb731961f1 236 Gene3D G3DSA:3.40.50.150 2 163 2.0E-54 T 01-11-2018 DOE78_17325 86f40c7aeb5345183167b9fb731961f1 236 PIRSF PIRSF018637 4 236 1.7E-86 T 01-11-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 DOE78_17325 86f40c7aeb5345183167b9fb731961f1 236 SUPERFAMILY SSF53335 10 104 2.11E-6 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_03780 3f61ee9b20953a1760b69083dafcce61 517 TIGRFAM TIGR02906 spore_CotS: spore coat protein, CotS family 10 320 9.3E-86 T 01-11-2018 IPR014255 Spore coat protein CotS DOE78_03780 3f61ee9b20953a1760b69083dafcce61 517 Gene3D G3DSA:3.90.1200.10 91 320 5.1E-64 T 01-11-2018 DOE78_03780 3f61ee9b20953a1760b69083dafcce61 517 Gene3D G3DSA:3.30.200.20 1 84 8.4E-23 T 01-11-2018 DOE78_03780 3f61ee9b20953a1760b69083dafcce61 517 SUPERFAMILY SSF56112 17 281 9.39E-28 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 Gene3D G3DSA:2.30.40.20 29 83 2.8E-30 T 01-11-2018 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 Gene3D G3DSA:1.10.150.20 191 243 6.6E-17 T 01-11-2018 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 Pfam PF11798 IMS family HHH motif 179 211 3.4E-8 T 01-11-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 Gene3D G3DSA:3.30.1490.100 258 365 8.8E-13 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 SUPERFAMILY SSF100879 258 357 2.35E-13 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 Gene3D G3DSA:3.30.70.270 12 173 2.8E-30 T 01-11-2018 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 SUPERFAMILY SSF56672 11 248 1.16E-54 T 01-11-2018 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 362 9.2E-17 T 01-11-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_16570 232fc34cebc2d9c64ef511d7733c5987 419 Pfam PF00817 impB/mucB/samB family 15 164 1.2E-27 T 01-11-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 Gene3D G3DSA:4.10.910.10 72 121 2.4E-26 T 01-11-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 PIRSF PIRSF002134 1 121 2.0E-44 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 6.0E-54 T 01-11-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 SUPERFAMILY SSF46946 2 114 4.97E-46 T 01-11-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 01-11-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 28.04 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 6.7E-35 T 01-11-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00850 6bb2fd44a56c42e0792fe0276d53d752 121 Gene3D G3DSA:1.10.8.50 1 71 1.5E-30 T 01-11-2018 DOE78_03695 a977ecc513e6b7186e8c14fa2da623f7 372 Pfam PF13556 PucR C-terminal helix-turn-helix domain 310 365 3.3E-20 T 01-11-2018 IPR025736 PucR C-terminal helix-turn-helix domain DOE78_03695 a977ecc513e6b7186e8c14fa2da623f7 372 Pfam PF05651 Putative sugar diacid recognition 4 136 2.2E-51 T 01-11-2018 IPR008599 Putative sugar diacid recognition DOE78_03695 a977ecc513e6b7186e8c14fa2da623f7 372 Gene3D G3DSA:1.10.10.2840 243 372 9.2E-24 T 01-11-2018 DOE78_02500 a9dd665d776b86dee61dace7b77d436e 500 Pfam PF02610 L-arabinose isomerase 179 362 2.4E-13 T 01-11-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DOE78_02500 a9dd665d776b86dee61dace7b77d436e 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 7 306 2.0E-5 T 01-11-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DOE78_02500 a9dd665d776b86dee61dace7b77d436e 500 SUPERFAMILY SSF50443 358 499 1.39E-20 T 01-11-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DOE78_02500 a9dd665d776b86dee61dace7b77d436e 500 SUPERFAMILY SSF53743 10 359 1.01E-67 T 01-11-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 Gene3D G3DSA:3.40.50.300 12 276 1.8E-110 T 01-11-2018 DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 SUPERFAMILY SSF52540 4 645 3.47E-190 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 737 0.0 T 01-11-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 Pfam PF13361 UvrD-like helicase C-terminal domain 280 618 1.7E-73 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 1.7E-84 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 Gene3D G3DSA:3.40.50.300 283 636 6.1E-131 T 01-11-2018 DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 Gene3D G3DSA:1.10.10.160 116 190 1.8E-110 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily DOE78_01910 ed7cdf652d745d1ac3b8a66188978bbb 740 Gene3D G3DSA:1.10.486.10 386 549 6.1E-131 T 01-11-2018 DOE78_11970 d09e47425c3cadae3351e6f7ccfb00aa 335 Gene3D G3DSA:3.90.1200.10 122 327 2.0E-26 T 01-11-2018 DOE78_11970 d09e47425c3cadae3351e6f7ccfb00aa 335 SUPERFAMILY SSF56112 7 332 2.14E-45 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_11970 d09e47425c3cadae3351e6f7ccfb00aa 335 Pfam PF01636 Phosphotransferase enzyme family 25 250 1.8E-22 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_11970 d09e47425c3cadae3351e6f7ccfb00aa 335 Gene3D G3DSA:3.30.200.20 16 103 5.5E-7 T 01-11-2018 DOE78_03775 770bc318ad4f6baaaf0811340c9c6eb4 384 Gene3D G3DSA:3.40.50.2000 184 380 2.9E-43 T 01-11-2018 DOE78_03775 770bc318ad4f6baaaf0811340c9c6eb4 384 Pfam PF00534 Glycosyl transferases group 1 189 358 4.6E-31 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_03775 770bc318ad4f6baaaf0811340c9c6eb4 384 Gene3D G3DSA:3.40.50.2000 1 183 2.3E-16 T 01-11-2018 DOE78_03775 770bc318ad4f6baaaf0811340c9c6eb4 384 SUPERFAMILY SSF53756 1 379 1.26E-69 T 01-11-2018 DOE78_03775 770bc318ad4f6baaaf0811340c9c6eb4 384 Pfam PF13439 Glycosyltransferase Family 4 22 172 5.2E-12 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_16510 38c5c9c09adcaf1cee2c5ba7aab46e09 300 Gene3D G3DSA:3.20.20.70 1 298 4.7E-110 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_16510 38c5c9c09adcaf1cee2c5ba7aab46e09 300 SUPERFAMILY SSF51569 3 292 2.01E-69 T 01-11-2018 DOE78_16510 38c5c9c09adcaf1cee2c5ba7aab46e09 300 Pfam PF00682 HMGL-like 8 280 4.5E-46 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 325 617 6.5E-127 T 01-11-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 SUPERFAMILY SSF49785 8 219 5.1E-66 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 445 459 - T 01-11-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Pfam PF00703 Glycosyl hydrolases family 2 221 323 3.1E-14 T 01-11-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 SUPERFAMILY SSF49303 221 323 8.92E-21 T 01-11-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 SMART SM01038 736 1007 2.7E-114 T 01-11-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Gene3D G3DSA:2.60.40.10 221 323 2.7E-19 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Gene3D G3DSA:2.60.40.10 614 712 1.8E-18 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Gene3D G3DSA:3.20.20.80 326 612 8.2E-99 T 01-11-2018 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 SUPERFAMILY SSF49303 620 711 1.08E-20 T 01-11-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Pfam PF16353 Domain of unknown function(DUF4981) 626 711 1.5E-18 T 01-11-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 PRINTS PR00132 Glycosyl hydrolase family 2 signature 445 460 1.6E-36 T 01-11-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 PRINTS PR00132 Glycosyl hydrolase family 2 signature 520 535 1.6E-36 T 01-11-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 PRINTS PR00132 Glycosyl hydrolase family 2 signature 365 383 1.6E-36 T 01-11-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 1.6E-36 T 01-11-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 PRINTS PR00132 Glycosyl hydrolase family 2 signature 334 348 1.6E-36 T 01-11-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Pfam PF02929 Beta galactosidase small chain 739 1006 3.1E-71 T 01-11-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Gene3D G3DSA:2.60.120.260 7 220 1.2E-85 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 SUPERFAMILY SSF74650 721 1007 2.67E-86 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 375 400 - T 01-11-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 SUPERFAMILY SSF51445 329 614 2.31E-87 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Gene3D G3DSA:2.70.98.10 724 1008 8.8E-79 T 01-11-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DOE78_13940 b076d7d7723c6c5acaef6369de2103dc 1009 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 47 219 1.1E-37 T 01-11-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_21840 00e8a067b6ae84d1879373cfd11a87cf 158 SUPERFAMILY SSF88659 93 151 1.35E-14 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_21840 00e8a067b6ae84d1879373cfd11a87cf 158 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 149 2.9E-27 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_21840 00e8a067b6ae84d1879373cfd11a87cf 158 SUPERFAMILY SSF88946 2 78 6.67E-19 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_21840 00e8a067b6ae84d1879373cfd11a87cf 158 Pfam PF08281 Sigma-70, region 4 104 147 1.9E-14 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_21840 00e8a067b6ae84d1879373cfd11a87cf 158 Gene3D G3DSA:1.10.10.10 95 152 4.0E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_21840 00e8a067b6ae84d1879373cfd11a87cf 158 Pfam PF04542 Sigma-70 region 2 2 63 8.9E-15 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_21840 00e8a067b6ae84d1879373cfd11a87cf 158 Gene3D G3DSA:1.10.1740.10 1 94 4.6E-21 T 01-11-2018 DOE78_11280 1d4fcbedf3e89c8cebdc7cca1aec864e 110 Pfam PF11553 Protein of unknown function (DUF3231) 18 94 1.3E-12 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_11280 1d4fcbedf3e89c8cebdc7cca1aec864e 110 Gene3D G3DSA:1.20.1260.10 12 110 1.2E-27 T 01-11-2018 IPR012347 Ferritin-like DOE78_20200 10a478c8e863ba381c0823873ca08345 571 SUPERFAMILY SSF51445 16 393 1.79E-80 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_20200 10a478c8e863ba381c0823873ca08345 571 Gene3D G3DSA:3.20.20.300 16 368 6.5E-89 T 01-11-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20200 10a478c8e863ba381c0823873ca08345 571 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 32 351 1.9E-67 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20200 10a478c8e863ba381c0823873ca08345 571 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 3.5E-5 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20200 10a478c8e863ba381c0823873ca08345 571 PRINTS PR00133 Glycosyl hydrolase family 3 signature 109 128 3.5E-5 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20200 10a478c8e863ba381c0823873ca08345 571 PRINTS PR00133 Glycosyl hydrolase family 3 signature 187 203 3.5E-5 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20200 10a478c8e863ba381c0823873ca08345 571 Gene3D G3DSA:3.40.50.1700 379 563 1.2E-20 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_13875 0b865feceda55e23f99095062fc72e73 425 Pfam PF13416 Bacterial extracellular solute-binding protein 58 360 2.3E-40 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_13875 0b865feceda55e23f99095062fc72e73 425 Gene3D G3DSA:3.40.190.10 55 363 1.8E-91 T 01-11-2018 DOE78_13875 0b865feceda55e23f99095062fc72e73 425 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 146 163 - T 01-11-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 DOE78_13875 0b865feceda55e23f99095062fc72e73 425 SUPERFAMILY SSF53850 19 424 7.25E-70 T 01-11-2018 DOE78_13875 0b865feceda55e23f99095062fc72e73 425 Gene3D G3DSA:3.40.190.10 150 406 1.8E-91 T 01-11-2018 DOE78_05255 6b045e0618972bf86a06c4413029795a 146 Gene3D G3DSA:3.30.1490.190 89 146 3.2E-24 T 01-11-2018 DOE78_05255 6b045e0618972bf86a06c4413029795a 146 Pfam PF01475 Ferric uptake regulator family 16 134 2.7E-41 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DOE78_05255 6b045e0618972bf86a06c4413029795a 146 SUPERFAMILY SSF46785 9 139 1.27E-42 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_05255 6b045e0618972bf86a06c4413029795a 146 Gene3D G3DSA:1.10.10.10 2 88 7.5E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 Pfam PF07690 Major Facilitator Superfamily 305 418 4.4E-13 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 Pfam PF07690 Major Facilitator Superfamily 40 297 5.7E-42 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 SUPERFAMILY SSF103473 25 419 5.49E-69 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 PRINTS PR01035 Tetracycline resistance protein signature 40 56 4.7E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 PRINTS PR01035 Tetracycline resistance protein signature 161 183 4.7E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 PRINTS PR01035 Tetracycline resistance protein signature 330 350 4.7E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 PRINTS PR01035 Tetracycline resistance protein signature 189 209 4.7E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 PRINTS PR01035 Tetracycline resistance protein signature 365 388 4.7E-7 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 Gene3D G3DSA:1.20.1250.20 22 417 1.1E-66 T 01-11-2018 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_15085 50f8e79c99bcd5a5e78be4860d80b6c3 421 ProSitePatterns PS00217 Sugar transport proteins signature 2. 337 362 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_10210 fbe987149b589d61fe2e422267883533 246 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 239 9.8E-75 T 01-11-2018 IPR022493 Integral membrane YkoY DOE78_10210 fbe987149b589d61fe2e422267883533 246 Pfam PF03741 Integral membrane protein TerC family 16 199 5.7E-43 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 DOE78_23265 6000218a3476557f0e8a1092f00a5e99 228 SUPERFAMILY SSF51161 7 214 8.04E-39 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_23265 6000218a3476557f0e8a1092f00a5e99 228 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DOE78_23265 6000218a3476557f0e8a1092f00a5e99 228 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 165 3.0E-9 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_23265 6000218a3476557f0e8a1092f00a5e99 228 Gene3D G3DSA:2.160.10.10 17 227 1.8E-51 T 01-11-2018 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 2.8E-36 T 01-11-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 SUPERFAMILY SSF52540 138 435 3.47E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 PIRSF PIRSF006485 2 436 6.3E-176 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 SUPERFAMILY SSF52540 5 167 1.61E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 3.2E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 3.2E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 7.1E-181 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 Hamap MF_00195 GTPase Der [der]. 3 436 41.553 T 01-11-2018 IPR016484 GTP-binding protein EngA GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 Gene3D G3DSA:3.40.50.300 1 163 1.8E-46 T 01-11-2018 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 Pfam PF01926 50S ribosome-binding GTPase 179 295 1.8E-26 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.0E-25 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 Gene3D G3DSA:3.30.300.20 353 436 4.6E-37 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 125 8.4E-24 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 344 2.1E-27 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_16135 23a7ec137d28904018b9256e46e9b277 436 Gene3D G3DSA:3.40.50.300 170 352 5.1E-56 T 01-11-2018 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 Gene3D G3DSA:3.20.20.80 1 415 9.2E-109 T 01-11-2018 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 PRINTS PR00131 Glycosyl hydrolase family 1 signature 343 354 3.2E-13 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 PRINTS PR00131 Glycosyl hydrolase family 1 signature 364 381 3.2E-13 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 PRINTS PR00131 Glycosyl hydrolase family 1 signature 331 339 3.2E-13 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 PRINTS PR00131 Glycosyl hydrolase family 1 signature 388 400 3.2E-13 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 PRINTS PR00131 Glycosyl hydrolase family 1 signature 276 290 3.2E-13 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 Pfam PF00232 Glycosyl hydrolase family 1 3 415 1.1E-65 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_11895 b432185dccd46afd51f3ce701ae54bcb 422 SUPERFAMILY SSF51445 4 415 5.14E-104 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 SUPERFAMILY SSF52440 3 116 9.35E-45 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 SUPERFAMILY SSF51246 341 459 1.67E-37 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Gene3D G3DSA:3.10.600.10 465 506 2.1E-6 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 325 1.0E-76 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 7 1143 0.0 T 01-11-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 SUPERFAMILY SSF89000 832 1009 8.24E-58 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Pfam PF02785 Biotin carboxylase C-terminal domain 345 452 2.2E-31 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 SUPERFAMILY SSF56059 87 333 2.65E-66 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Pfam PF00364 Biotin-requiring enzyme 1077 1143 1.8E-16 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Gene3D G3DSA:3.30.470.130 1 460 8.9E-192 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 SMART SM00878 345 452 7.1E-51 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Gene3D G3DSA:1.10.10.2790 942 977 1.1E-291 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 SUPERFAMILY SSF51569 524 835 1.68E-81 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Gene3D G3DSA:3.10.600.10 507 1059 1.1E-291 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 1.4E-42 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Gene3D G3DSA:3.20.20.70 512 816 1.1E-291 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Gene3D G3DSA:2.40.50.100 1067 1145 1.2E-23 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Gene3D G3DSA:1.10.472.90 817 941 1.1E-291 T 01-11-2018 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Pfam PF02436 Conserved carboxylase domain 827 1027 4.9E-77 T 01-11-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 Pfam PF00682 HMGL-like 532 803 5.6E-27 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 PIRSF PIRSF001594 1 1145 0.0 T 01-11-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DOE78_07465 3165ca492a8cf22b1ae24ad7cc27391c 1145 SUPERFAMILY SSF51230 1068 1143 4.97E-20 T 01-11-2018 IPR011053 Single hybrid motif DOE78_24450 5de02291cd7b38a09b24594142e5891f 250 Gene3D G3DSA:3.40.50.300 1 246 1.6E-66 T 01-11-2018 DOE78_24450 5de02291cd7b38a09b24594142e5891f 250 SUPERFAMILY SSF52540 2 229 5.68E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24450 5de02291cd7b38a09b24594142e5891f 250 SMART SM00382 30 222 6.3E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24450 5de02291cd7b38a09b24594142e5891f 250 Pfam PF00005 ABC transporter 21 165 1.2E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_24450 5de02291cd7b38a09b24594142e5891f 250 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_01150 785fe6643a1a931fb015c97f0b007c46 336 Pfam PF07854 Protein of unknown function (DUF1646) 4 335 4.6E-114 T 01-11-2018 IPR012443 Protein of unknown function DUF1646 DOE78_01150 785fe6643a1a931fb015c97f0b007c46 336 PIRSF PIRSF019205 1 336 1.0E-120 T 01-11-2018 IPR012443 Protein of unknown function DUF1646 DOE78_07035 c403ef9dabef106c77c88ae59863a40c 204 SMART SM01007 9 197 2.3E-34 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_07035 c403ef9dabef106c77c88ae59863a40c 204 SUPERFAMILY SSF53639 5 200 4.51E-40 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_07035 c403ef9dabef106c77c88ae59863a40c 204 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 195 6.8E-36 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_07035 c403ef9dabef106c77c88ae59863a40c 204 Gene3D G3DSA:3.40.225.10 5 204 3.1E-46 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_07035 c403ef9dabef106c77c88ae59863a40c 204 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 12 200 1.8E-61 T 01-11-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 DOE78_07035 c403ef9dabef106c77c88ae59863a40c 204 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 97.963 T 01-11-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Gene3D G3DSA:2.30.42.20 434 617 1.8E-66 T 01-11-2018 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 SUPERFAMILY SSF55874 4 212 1.07E-51 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Gene3D G3DSA:3.30.230.10 212 324 1.7E-31 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 615 27.876 T 01-11-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 SUPERFAMILY SSF54211 188 325 4.17E-36 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 84 7.4E-11 T 01-11-2018 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 305 4.7E-96 T 01-11-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Pfam PF08676 MutL C terminal dimerisation domain 434 575 1.1E-47 T 01-11-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 SMART SM00853 433 575 1.8E-54 T 01-11-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Gene3D G3DSA:3.30.565.10 3 211 1.9E-60 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 01-11-2018 IPR014762 DNA mismatch repair, conserved site DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 SMART SM01340 207 325 1.1E-50 T 01-11-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 SUPERFAMILY SSF118116 429 617 3.14E-56 T 01-11-2018 IPR037198 MutL, C-terminal domain superfamily DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 324 1.7E-35 T 01-11-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DOE78_08610 e4075e80d3ed2c538dd73e1d1261235c 619 Gene3D G3DSA:3.30.1370.100 475 568 1.8E-66 T 01-11-2018 DOE78_07040 acdb045e585cd7202b6220e7e5bfc914 177 Gene3D G3DSA:2.60.120.10 1 170 1.8E-57 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_07040 acdb045e585cd7202b6220e7e5bfc914 177 SUPERFAMILY SSF51182 9 172 4.31E-33 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_07040 acdb045e585cd7202b6220e7e5bfc914 177 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 175 29.326 T 01-11-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 DOE78_07040 acdb045e585cd7202b6220e7e5bfc914 177 Pfam PF03079 ARD/ARD' family 5 168 4.0E-43 T 01-11-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 SMART SM00418 34 113 5.4E-32 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 1.3E-22 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.3E-22 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 1.3E-22 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.3E-22 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 SUPERFAMILY SSF46785 21 114 2.58E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 Gene3D G3DSA:1.10.10.10 1 121 2.6E-37 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 58 76 - T 01-11-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 DOE78_21400 6b96971075ae274f7d5e5bf5916fb70c 122 Pfam PF01022 Bacterial regulatory protein, arsR family 41 87 2.2E-13 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_07630 2c5ba8b272c6cc243b198beb29ff961a 192 Gene3D G3DSA:1.10.10.60 8 84 4.4E-5 T 01-11-2018 DOE78_07630 2c5ba8b272c6cc243b198beb29ff961a 192 SUPERFAMILY SSF46689 5 62 6.15E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_07630 2c5ba8b272c6cc243b198beb29ff961a 192 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 78 1.2E-42 T 01-11-2018 IPR014243 Transcription factor, RsfA DOE78_16090 9abdc8866e6a18ba3d3b324114c1dd86 233 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 2.1E-80 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DOE78_16090 9abdc8866e6a18ba3d3b324114c1dd86 233 Pfam PF01209 ubiE/COQ5 methyltransferase family 2 233 7.1E-98 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DOE78_16090 9abdc8866e6a18ba3d3b324114c1dd86 233 Gene3D G3DSA:3.40.50.150 15 233 1.0E-66 T 01-11-2018 DOE78_16090 9abdc8866e6a18ba3d3b324114c1dd86 233 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 233 36.445 T 01-11-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DOE78_16090 9abdc8866e6a18ba3d3b324114c1dd86 233 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 01-11-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DOE78_16090 9abdc8866e6a18ba3d3b324114c1dd86 233 SUPERFAMILY SSF53335 4 230 2.15E-52 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_16090 9abdc8866e6a18ba3d3b324114c1dd86 233 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 233 1.8E-133 T 01-11-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DOE78_20020 2da728bc824fed3dcb67c66e511122d9 176 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 4 170 1.2E-77 T 01-11-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DOE78_20020 2da728bc824fed3dcb67c66e511122d9 176 PIRSF PIRSF038321 1 176 5.4E-82 T 01-11-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DOE78_20020 2da728bc824fed3dcb67c66e511122d9 176 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 175 2.2E-60 T 01-11-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 Gene3D G3DSA:3.50.50.60 5 293 2.0E-53 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 SUPERFAMILY SSF51905 3 264 6.24E-43 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 5 318 3.7E-144 T 01-11-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 Gene3D G3DSA:3.50.50.60 131 248 2.0E-53 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.6E-10 T 01-11-2018 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.6E-10 T 01-11-2018 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.6E-10 T 01-11-2018 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.6E-10 T 01-11-2018 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 289 2.5E-103 T 01-11-2018 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 8.5E-16 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 119 127 8.5E-16 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 178 8.5E-16 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_16210 6c1a0f0f383e1f82cd47fc167b09d9bc 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 8.5E-16 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 290 401 3.0E-18 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 SMART SM00936 290 401 1.2E-17 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 19 270 9.3E-78 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 Gene3D G3DSA:2.60.410.10 291 401 4.0E-19 T 01-11-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 SUPERFAMILY SSF69189 282 372 5.69E-16 T 01-11-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 SUPERFAMILY SSF56601 3 290 1.09E-72 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 Gene3D G3DSA:3.40.710.10 18 290 2.8E-85 T 01-11-2018 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 4.0E-14 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 112 129 4.0E-14 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_00080 bbf303922f0cb7c812d36745be51080b 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 139 152 4.0E-14 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_03485 f7c9d19ba2bba256054f05730bd9b027 352 TIGRFAM TIGR00378 cax: calcium/proton exchanger 11 350 4.5E-147 T 01-11-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 DOE78_03485 f7c9d19ba2bba256054f05730bd9b027 352 Gene3D G3DSA:1.20.58.1130 197 239 1.0E-22 T 01-11-2018 DOE78_03485 f7c9d19ba2bba256054f05730bd9b027 352 Gene3D G3DSA:1.20.1420.30 60 342 1.0E-22 T 01-11-2018 DOE78_03485 f7c9d19ba2bba256054f05730bd9b027 352 Pfam PF01699 Sodium/calcium exchanger protein 208 344 9.1E-18 T 01-11-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DOE78_03485 f7c9d19ba2bba256054f05730bd9b027 352 Pfam PF01699 Sodium/calcium exchanger protein 27 179 6.1E-19 T 01-11-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DOE78_03485 f7c9d19ba2bba256054f05730bd9b027 352 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 6 349 1.1E-116 T 01-11-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 SMART SM00342 375 458 2.0E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 412 454 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 SUPERFAMILY SSF46689 361 409 1.52E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 427 442 8.3E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 442 458 8.3E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 Gene3D G3DSA:1.10.10.60 358 407 6.9E-11 T 01-11-2018 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 SMART SM00448 2 117 7.4E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 Pfam PF12833 Helix-turn-helix domain 381 459 1.6E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 SUPERFAMILY SSF46689 411 460 7.17E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 Pfam PF00072 Response regulator receiver domain 4 107 8.9E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 Gene3D G3DSA:3.40.50.12740 2 167 8.6E-36 T 01-11-2018 DOE78_02750 f953bf93d816c79de855be5de7c19390 463 SUPERFAMILY SSF52172 1 124 1.24E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_02750 f953bf93d816c79de855be5de7c19390 463 Gene3D G3DSA:1.10.10.60 408 461 1.1E-18 T 01-11-2018 DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 125 5.9E-16 T 01-11-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 SUPERFAMILY SSF48019 239 421 3.17E-70 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 Gene3D G3DSA:1.10.8.60 151 226 1.0E-19 T 01-11-2018 DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 419 1.9E-63 T 01-11-2018 IPR021886 MgsA AAA+ ATPase C-terminal DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 Gene3D G3DSA:3.40.50.300 1 150 5.4E-42 T 01-11-2018 DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 Gene3D G3DSA:1.20.272.10 229 332 4.4E-40 T 01-11-2018 DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 SUPERFAMILY SSF52540 4 233 3.02E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 SMART SM00382 39 151 3.4E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 Pfam PF16193 AAA C-terminal domain 173 253 4.9E-24 T 01-11-2018 IPR032423 AAA C-terminal domain DOE78_17750 556640fc8d21d55c84900ff2b779fdab 422 Gene3D G3DSA:1.10.3710.10 333 422 2.0E-23 T 01-11-2018 DOE78_12725 5bd65ca4f2d476aa6e0eeff2c00411aa 62 Pfam PF02416 mttA/Hcf106 family 5 55 4.0E-20 T 01-11-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DOE78_12725 5bd65ca4f2d476aa6e0eeff2c00411aa 62 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 47 3.1E-18 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DOE78_12725 5bd65ca4f2d476aa6e0eeff2c00411aa 62 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 59 15.588 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DOE78_12725 5bd65ca4f2d476aa6e0eeff2c00411aa 62 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 3.9E-5 T 01-11-2018 DOE78_12725 5bd65ca4f2d476aa6e0eeff2c00411aa 62 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 3.9E-5 T 01-11-2018 DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 45 4.2E-10 T 01-11-2018 DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 Gene3D G3DSA:3.40.1190.20 54 365 3.4E-79 T 01-11-2018 IPR029056 Ribokinase-like DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 Pfam PF00294 pfkB family carbohydrate kinase 58 349 5.7E-54 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 SUPERFAMILY SSF46785 2 47 3.47E-7 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 SUPERFAMILY SSF53613 58 353 5.92E-60 T 01-11-2018 IPR029056 Ribokinase-like DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 304 317 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_03405 4463324e49ae7716ec75c0dd5492a6ea 365 Gene3D G3DSA:1.10.10.10 2 53 2.9E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Gene3D G3DSA:1.10.8.280 286 403 8.2E-254 T 01-11-2018 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Gene3D G3DSA:1.20.1580.10 691 828 7.7E-145 T 01-11-2018 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Gene3D G3DSA:3.30.190.20 132 241 8.2E-254 T 01-11-2018 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Gene3D G3DSA:3.40.50.300 7 595 8.2E-254 T 01-11-2018 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.629 T 01-11-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 SUPERFAMILY SSF52540 613 911 7.1E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Gene3D G3DSA:3.40.50.300 613 934 7.7E-145 T 01-11-2018 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 SUPERFAMILY SSF52540 12 569 1.62E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 923 0.0 T 01-11-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Pfam PF00005 ABC transporter 622 858 1.4E-10 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 SMART SM00382 25 564 18.0 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 SMART SM00382 631 906 0.0051 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_22245 8c30ead975965c9dc7e588e2445c7985 959 Gene3D G3DSA:1.20.1580.10 92 492 8.2E-254 T 01-11-2018 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 SUPERFAMILY SSF55785 24 129 4.19E-11 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 Pfam PF08448 PAS fold 31 138 3.9E-7 T 01-11-2018 IPR013656 PAS fold-4 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 SMART SM00382 178 320 6.5E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 139 1.8E-9 T 01-11-2018 IPR000014 PAS domain DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 Gene3D G3DSA:3.40.50.300 144 327 1.7E-58 T 01-11-2018 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 Gene3D G3DSA:3.30.450.20 16 135 3.8E-13 T 01-11-2018 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 Pfam PF00158 Sigma-54 interaction domain 158 323 4.3E-62 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 Gene3D G3DSA:1.10.10.60 417 481 5.7E-16 T 01-11-2018 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 5.2E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 5.2E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 243 258 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 SUPERFAMILY SSF52540 157 400 8.22E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 Pfam PF02954 Bacterial regulatory protein, Fis family 437 477 4.5E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 SUPERFAMILY SSF46689 370 479 7.89E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_10155 86174179cb5a0eb398b43237e8c7d5eb 482 Gene3D G3DSA:1.10.8.60 328 408 3.6E-24 T 01-11-2018 DOE78_09560 eaa6dd09787b2a4d37e00fa6b6d0411b 281 SMART SM00382 28 216 4.0E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_09560 eaa6dd09787b2a4d37e00fa6b6d0411b 281 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_09560 eaa6dd09787b2a4d37e00fa6b6d0411b 281 Pfam PF00005 ABC transporter 19 167 1.7E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_09560 eaa6dd09787b2a4d37e00fa6b6d0411b 281 SUPERFAMILY SSF52540 4 230 1.41E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09560 eaa6dd09787b2a4d37e00fa6b6d0411b 281 Gene3D G3DSA:3.40.50.300 2 258 8.3E-70 T 01-11-2018 DOE78_23125 677431193175068db49cac6cf941e6b2 652 Pfam PF00082 Subtilase family 116 361 2.1E-47 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_23125 677431193175068db49cac6cf941e6b2 652 PRINTS PR00723 Subtilisin serine protease family (S8) signature 116 135 1.3E-13 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23125 677431193175068db49cac6cf941e6b2 652 PRINTS PR00723 Subtilisin serine protease family (S8) signature 310 326 1.3E-13 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23125 677431193175068db49cac6cf941e6b2 652 PRINTS PR00723 Subtilisin serine protease family (S8) signature 151 164 1.3E-13 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23125 677431193175068db49cac6cf941e6b2 652 SUPERFAMILY SSF52743 97 366 9.03E-79 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_23125 677431193175068db49cac6cf941e6b2 652 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 121 131 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_23125 677431193175068db49cac6cf941e6b2 652 Gene3D G3DSA:3.40.50.200 95 367 1.3E-77 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_23125 677431193175068db49cac6cf941e6b2 652 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 155 165 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_23125 677431193175068db49cac6cf941e6b2 652 Gene3D G3DSA:3.40.50.12090 395 488 1.6E-5 T 01-11-2018 DOE78_23125 677431193175068db49cac6cf941e6b2 652 Gene3D G3DSA:3.30.70.80 26 94 4.0E-10 T 01-11-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 DOE78_23125 677431193175068db49cac6cf941e6b2 652 Pfam PF04122 Putative cell wall binding repeat 2 470 555 4.1E-17 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23125 677431193175068db49cac6cf941e6b2 652 Pfam PF04122 Putative cell wall binding repeat 2 564 650 2.7E-14 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23125 677431193175068db49cac6cf941e6b2 652 Pfam PF04122 Putative cell wall binding repeat 2 371 457 2.5E-18 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23125 677431193175068db49cac6cf941e6b2 652 SUPERFAMILY SSF54897 30 89 1.42E-6 T 01-11-2018 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 165 1.5E-72 T 01-11-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 79 164 2.0E-38 T 01-11-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 SUPERFAMILY SSF55200 78 167 4.71E-34 T 01-11-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 Gene3D G3DSA:3.30.110.10 75 167 2.3E-37 T 01-11-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 72 2.2E-30 T 01-11-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 ProSitePatterns PS00938 Initiation factor 3 signature. 54 67 - T 01-11-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 29.079 T 01-11-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 SUPERFAMILY SSF54364 2 74 1.7E-28 T 01-11-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DOE78_18355 93add7eb3325e15051d99be21c03ffa8 167 Gene3D G3DSA:3.10.20.80 1 74 1.2E-31 T 01-11-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DOE78_13435 fc523517d5e46ffb85afb5339e3b2ff1 476 Gene3D G3DSA:3.90.1150.110 30 457 6.8E-162 T 01-11-2018 DOE78_13435 fc523517d5e46ffb85afb5339e3b2ff1 476 Gene3D G3DSA:3.40.640.10 99 364 6.8E-162 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_13435 fc523517d5e46ffb85afb5339e3b2ff1 476 SUPERFAMILY SSF53383 76 468 9.83E-47 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_13435 fc523517d5e46ffb85afb5339e3b2ff1 476 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 471 178.339 T 01-11-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DOE78_13435 fc523517d5e46ffb85afb5339e3b2ff1 476 Pfam PF03841 L-seryl-tRNA selenium transferase 87 453 4.6E-148 T 01-11-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DOE78_13435 fc523517d5e46ffb85afb5339e3b2ff1 476 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 6 465 6.4E-169 T 01-11-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DOE78_10345 f7c816ea0562ebd178532121f5e30ffd 143 Pfam PF09537 Domain of unknown function (DUF2383) 6 98 3.2E-15 T 01-11-2018 IPR019052 Domain of unknown function DUF2383 DOE78_10345 f7c816ea0562ebd178532121f5e30ffd 143 SUPERFAMILY SSF47240 1 142 1.34E-13 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_10345 f7c816ea0562ebd178532121f5e30ffd 143 Gene3D G3DSA:1.20.1260.10 3 143 3.5E-32 T 01-11-2018 IPR012347 Ferritin-like DOE78_20405 862ac31a2f2064004181a5c059b95516 155 Pfam PF04892 VanZ like family 24 125 1.9E-10 T 01-11-2018 IPR006976 VanZ-like DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 SUPERFAMILY SSF52540 106 374 1.38E-94 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 35 447 1.3E-204 T 01-11-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 Gene3D G3DSA:3.40.50.12240 25 450 3.0E-151 T 01-11-2018 DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 368 5.9E-74 T 01-11-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 SMART SM00382 171 352 5.7E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 359 368 - T 01-11-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 37 101 5.8E-7 T 01-11-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_08180 ab4e16903ea266c56d653f93d83a9cf1 453 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 448 1.7E-197 T 01-11-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_02255 b16620254105886e09c7a9412902c18d 136 SUPERFAMILY SSF54909 63 135 2.86E-7 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_02255 b16620254105886e09c7a9412902c18d 136 SUPERFAMILY SSF46785 1 62 4.4E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_02255 b16620254105886e09c7a9412902c18d 136 Gene3D G3DSA:1.10.10.10 1 53 4.8E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02255 b16620254105886e09c7a9412902c18d 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.5E-11 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 DOE78_02255 b16620254105886e09c7a9412902c18d 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.5E-11 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 DOE78_02255 b16620254105886e09c7a9412902c18d 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.5E-11 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 DOE78_02255 b16620254105886e09c7a9412902c18d 136 Pfam PF01037 Lrp/AsnC ligand binding domain 90 135 4.1E-6 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE78_02255 b16620254105886e09c7a9412902c18d 136 SMART SM00344 2 109 8.1E-28 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DOE78_02255 b16620254105886e09c7a9412902c18d 136 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 3.4E-16 T 01-11-2018 DOE78_02255 b16620254105886e09c7a9412902c18d 136 Gene3D G3DSA:3.30.70.920 54 136 7.0E-14 T 01-11-2018 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 SMART SM00448 2 115 3.3E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 5.4E-22 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 SUPERFAMILY SSF52172 2 132 3.27E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 SUPERFAMILY SSF46894 140 209 4.08E-23 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 Pfam PF00072 Response regulator receiver domain 4 115 1.5E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 Gene3D G3DSA:3.40.50.12740 2 209 2.6E-75 T 01-11-2018 DOE78_03235 2ba15a52c2c99e81776243e87199e1f2 210 SMART SM00421 146 203 4.3E-27 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_06655 1019030a1e743d5bf39f6ab7f3ca0c2e 605 Gene3D G3DSA:1.20.140.70 30 185 3.5E-55 T 01-11-2018 DOE78_06655 1019030a1e743d5bf39f6ab7f3ca0c2e 605 Pfam PF08439 Oligopeptidase F 120 189 6.1E-25 T 01-11-2018 IPR013647 Oligopeptidase F, N-terminal domain DOE78_06655 1019030a1e743d5bf39f6ab7f3ca0c2e 605 Gene3D G3DSA:1.10.1370.20 234 605 9.7E-143 T 01-11-2018 DOE78_06655 1019030a1e743d5bf39f6ab7f3ca0c2e 605 Gene3D G3DSA:1.10.287.830 187 233 3.2E-21 T 01-11-2018 DOE78_06655 1019030a1e743d5bf39f6ab7f3ca0c2e 605 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 13 602 1.9E-219 T 01-11-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 DOE78_06655 1019030a1e743d5bf39f6ab7f3ca0c2e 605 Pfam PF01432 Peptidase family M3 211 591 3.5E-79 T 01-11-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DOE78_06655 1019030a1e743d5bf39f6ab7f3ca0c2e 605 SUPERFAMILY SSF55486 61 603 1.55E-137 T 01-11-2018 DOE78_09710 146f8b4d87c7916ed8c4b3a09c494293 138 Gene3D G3DSA:3.30.530.20 1 138 9.2E-44 T 01-11-2018 IPR023393 START-like domain superfamily DOE78_09710 146f8b4d87c7916ed8c4b3a09c494293 138 SUPERFAMILY SSF55961 4 131 8.25E-41 T 01-11-2018 DOE78_09710 146f8b4d87c7916ed8c4b3a09c494293 138 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 106 1.8E-16 T 01-11-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like DOE78_15635 d93ce17adbd216cd78923785507247c1 415 Pfam PF01546 Peptidase family M20/M25/M40 83 411 1.0E-27 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_15635 d93ce17adbd216cd78923785507247c1 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 18 413 3.3E-135 T 01-11-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DOE78_15635 d93ce17adbd216cd78923785507247c1 415 PIRSF PIRSF001235 10 415 6.3E-131 T 01-11-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DOE78_15635 d93ce17adbd216cd78923785507247c1 415 SUPERFAMILY SSF55031 218 334 5.06E-26 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_15635 d93ce17adbd216cd78923785507247c1 415 Pfam PF07687 Peptidase dimerisation domain 220 312 3.1E-5 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_15635 d93ce17adbd216cd78923785507247c1 415 SUPERFAMILY SSF53187 10 414 3.28E-79 T 01-11-2018 DOE78_15635 d93ce17adbd216cd78923785507247c1 415 Gene3D G3DSA:3.30.70.360 218 332 8.4E-132 T 01-11-2018 DOE78_15635 d93ce17adbd216cd78923785507247c1 415 Gene3D G3DSA:3.40.630.10 25 406 8.4E-132 T 01-11-2018 DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 SUPERFAMILY SSF52833 1 158 1.6E-64 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 PIRSF PIRSF000303 1 158 9.1E-69 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 01-11-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 Pfam PF00255 Glutathione peroxidase 3 109 5.9E-45 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 Gene3D G3DSA:3.40.30.10 1 158 3.7E-75 T 01-11-2018 DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.3E-19 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.3E-19 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DOE78_15595 8594714495e6f1d0d89ff19cc9c444ca 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 1.3E-19 T 01-11-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DOE78_16520 4fc026bcff5daea3da53e728a1207e72 306 SUPERFAMILY SSF103481 41 141 1.7E-13 T 01-11-2018 DOE78_16520 4fc026bcff5daea3da53e728a1207e72 306 Pfam PF00892 EamA-like transporter family 153 294 3.7E-19 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_16520 4fc026bcff5daea3da53e728a1207e72 306 Pfam PF00892 EamA-like transporter family 7 139 4.5E-24 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_16520 4fc026bcff5daea3da53e728a1207e72 306 SUPERFAMILY SSF103481 215 300 3.01E-10 T 01-11-2018 DOE78_20475 0925577d7e09f736bd83d33bbbba3149 393 Gene3D G3DSA:3.40.640.10 3 254 3.0E-87 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_20475 0925577d7e09f736bd83d33bbbba3149 393 PIRSF PIRSF000390 6 384 9.7E-104 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE78_20475 0925577d7e09f736bd83d33bbbba3149 393 Gene3D G3DSA:3.90.1150.10 256 392 1.0E-39 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_20475 0925577d7e09f736bd83d33bbbba3149 393 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 379 1.1E-101 T 01-11-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DOE78_20475 0925577d7e09f736bd83d33bbbba3149 393 SUPERFAMILY SSF53383 15 382 1.67E-103 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_10850 cdb3a4c9fba273630bcdd83678d46b79 165 Gene3D G3DSA:3.40.630.30 2 160 1.3E-37 T 01-11-2018 DOE78_10850 cdb3a4c9fba273630bcdd83678d46b79 165 SUPERFAMILY SSF55729 1 159 1.41E-21 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10850 cdb3a4c9fba273630bcdd83678d46b79 165 Pfam PF00583 Acetyltransferase (GNAT) family 24 139 2.1E-13 T 01-11-2018 IPR000182 GNAT domain DOE78_24085 98dcb023481d69f88a132677fe339ba9 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 279 1.1E-67 T 01-11-2018 DOE78_24085 98dcb023481d69f88a132677fe339ba9 285 Gene3D G3DSA:3.40.50.1000 3 275 7.7E-84 T 01-11-2018 IPR023214 HAD superfamily DOE78_24085 98dcb023481d69f88a132677fe339ba9 285 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 279 9.9E-61 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_24085 98dcb023481d69f88a132677fe339ba9 285 SUPERFAMILY SSF56784 1 282 2.31E-69 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_24085 98dcb023481d69f88a132677fe339ba9 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 252 1.1E-30 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_24085 98dcb023481d69f88a132677fe339ba9 285 ProSitePatterns PS01229 Hypothetical cof family signature 2. 233 255 - T 01-11-2018 DOE78_24085 98dcb023481d69f88a132677fe339ba9 285 Gene3D G3DSA:3.30.1240.10 82 208 7.7E-84 T 01-11-2018 DOE78_09605 ac6ad16d1d55b684d7eb66d7f25f3883 505 SUPERFAMILY SSF53448 279 460 3.58E-23 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09605 ac6ad16d1d55b684d7eb66d7f25f3883 505 Gene3D G3DSA:3.90.550.10 257 407 6.0E-23 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09605 ac6ad16d1d55b684d7eb66d7f25f3883 505 Pfam PF00535 Glycosyl transferase family 2 282 385 2.6E-17 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09605 ac6ad16d1d55b684d7eb66d7f25f3883 505 SUPERFAMILY SSF53448 23 165 1.09E-5 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_01380 76c15b2074a13eb36e4c0ebe7269e8c0 197 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 33 158 1.7E-7 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_01380 76c15b2074a13eb36e4c0ebe7269e8c0 197 SUPERFAMILY SSF81606 12 193 6.41E-15 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_01380 76c15b2074a13eb36e4c0ebe7269e8c0 197 Gene3D G3DSA:3.60.40.10 4 196 5.3E-36 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_01380 76c15b2074a13eb36e4c0ebe7269e8c0 197 SMART SM00331 7 196 4.7E-27 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_20210 f9d7d2bdc3c4248696d51d1e28233223 301 SUPERFAMILY SSF53474 15 300 2.15E-34 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_20210 f9d7d2bdc3c4248696d51d1e28233223 301 Pfam PF07859 alpha/beta hydrolase fold 93 267 7.0E-14 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DOE78_20210 f9d7d2bdc3c4248696d51d1e28233223 301 Gene3D G3DSA:3.40.50.1820 2 300 1.4E-67 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 SUPERFAMILY SSF48452 389 503 2.15E-20 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 SMART SM00028 393 426 200.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 SMART SM00028 427 460 8.2 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 SMART SM00028 461 494 6.2E-4 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 Pfam PF01694 Rhomboid family 220 355 1.5E-35 T 01-11-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 Pfam PF07719 Tetratricopeptide repeat 462 493 5.0E-7 T 01-11-2018 IPR013105 Tetratricopeptide repeat 2 DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 Gene3D G3DSA:1.20.1540.10 172 361 1.9E-49 T 01-11-2018 IPR035952 Rhomboid-like superfamily DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 SUPERFAMILY SSF144091 177 360 6.15E-44 T 01-11-2018 DOE78_17140 4fb794481dc4435e883beaf9547e95ab 506 Gene3D G3DSA:1.25.40.10 362 506 1.3E-20 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Gene3D G3DSA:3.90.640.10 198 279 1.0E-152 T 01-11-2018 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 335 355 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 172 182 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 439 455 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 304 320 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 358 377 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 112 132 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.8E-79 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Gene3D G3DSA:2.60.34.10 353 493 2.3E-64 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 SUPERFAMILY SSF53067 1 157 6.48E-58 T 01-11-2018 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Gene3D G3DSA:3.30.420.40 5 347 1.0E-152 T 01-11-2018 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Gene3D G3DSA:1.20.1270.10 494 577 8.2E-18 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 3.5E-284 T 01-11-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 SUPERFAMILY SSF53067 161 351 2.53E-67 T 01-11-2018 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Gene3D G3DSA:3.30.420.40 159 337 1.0E-152 T 01-11-2018 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 SUPERFAMILY SSF100920 354 510 1.7E-61 T 01-11-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Pfam PF00012 Hsp70 protein 4 77 8.4E-30 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Pfam PF00012 Hsp70 protein 78 573 1.2E-218 T 01-11-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 604 37.049 T 01-11-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 SUPERFAMILY SSF100934 477 580 3.01E-14 T 01-11-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DOE78_17485 5a7c96f4045ed487945c9af9d584dffe 608 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DOE78_04965 a54478a9db85575ec262f770b6858841 427 Pfam PF01547 Bacterial extracellular solute-binding protein 45 340 4.6E-47 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_04965 a54478a9db85575ec262f770b6858841 427 SUPERFAMILY SSF53850 19 425 3.69E-86 T 01-11-2018 DOE78_04965 a54478a9db85575ec262f770b6858841 427 Gene3D G3DSA:3.40.190.10 152 416 7.1E-99 T 01-11-2018 DOE78_04965 a54478a9db85575ec262f770b6858841 427 Gene3D G3DSA:3.40.190.10 51 383 7.1E-99 T 01-11-2018 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 Gene3D G3DSA:3.40.50.740 129 622 6.9E-100 T 01-11-2018 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 Pfam PF01568 Molydopterin dinucleotide binding domain 658 735 1.6E-5 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 Gene3D G3DSA:2.40.40.20 652 765 9.7E-6 T 01-11-2018 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 PIRSF PIRSF000144 89 765 9.5E-104 T 01-11-2018 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 SUPERFAMILY SSF50692 652 763 1.47E-9 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 Gene3D G3DSA:3.40.228.10 200 421 6.9E-100 T 01-11-2018 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 SUPERFAMILY SSF53706 77 646 3.66E-123 T 01-11-2018 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 Pfam PF00384 Molybdopterin oxidoreductase 124 579 2.3E-41 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_06310 1c6bb0abbb6bd9125a2dc6cf1913ac11 785 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 21 759 7.4E-242 T 01-11-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 296 405 3.9E-7 T 01-11-2018 DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1157 60.362 T 01-11-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 Gene3D G3DSA:3.40.50.300 1 148 2.2E-34 T 01-11-2018 DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 Gene3D G3DSA:3.40.50.300 560 691 1.1E-39 T 01-11-2018 DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 Gene3D G3DSA:3.40.50.300 274 387 2.1E-28 T 01-11-2018 DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 SUPERFAMILY SSF52540 297 745 8.07E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 Pfam PF12705 PD-(D/E)XK nuclease superfamily 785 1126 4.9E-58 T 01-11-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DOE78_06165 98ce18cb3819c0150be4ff4ad73cbc99 1168 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1157 0.0 T 01-11-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 DOE78_02475 c94b91bf2ea145494118fd01212c5812 412 Gene3D G3DSA:3.30.1490.330 264 359 1.3E-9 T 01-11-2018 DOE78_02475 c94b91bf2ea145494118fd01212c5812 412 SUPERFAMILY SSF56059 5 406 7.77E-42 T 01-11-2018 DOE78_02475 c94b91bf2ea145494118fd01212c5812 412 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 19 406 2.5E-74 T 01-11-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain DOE78_02475 c94b91bf2ea145494118fd01212c5812 412 SUPERFAMILY SSF52440 166 279 1.87E-9 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_11735 ac1e7a1cb1b95c3eb73bb720a3d17d01 197 SUPERFAMILY SSF52218 18 169 3.64E-30 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_11735 ac1e7a1cb1b95c3eb73bb720a3d17d01 197 Gene3D G3DSA:3.40.50.360 4 196 5.4E-41 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_11735 ac1e7a1cb1b95c3eb73bb720a3d17d01 197 Pfam PF03358 NADPH-dependent FMN reductase 22 147 2.1E-28 T 01-11-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DOE78_09610 ba7d3ed09b96192feff8e5d8af132321 429 SUPERFAMILY SSF53756 5 364 2.89E-20 T 01-11-2018 DOE78_09610 ba7d3ed09b96192feff8e5d8af132321 429 Gene3D G3DSA:3.40.50.2000 114 198 9.4E-17 T 01-11-2018 DOE78_09610 ba7d3ed09b96192feff8e5d8af132321 429 Gene3D G3DSA:3.40.50.2000 199 342 9.4E-17 T 01-11-2018 DOE78_01590 009a815ec7602e9dfec3a263f9f44989 241 SUPERFAMILY SSF69318 9 113 7.72E-9 T 01-11-2018 DOE78_05495 fbbb39330b730f1585f80197fcea7e95 470 Gene3D G3DSA:3.90.550.10 42 321 1.3E-43 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_05495 fbbb39330b730f1585f80197fcea7e95 470 Pfam PF13641 Glycosyltransferase like family 2 63 328 4.0E-19 T 01-11-2018 DOE78_05495 fbbb39330b730f1585f80197fcea7e95 470 SUPERFAMILY SSF53448 60 370 2.17E-48 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20305 2b0e5b7336afd49e58dac6b46df7816e 137 Gene3D G3DSA:1.10.10.10 1 137 7.2E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_20305 2b0e5b7336afd49e58dac6b46df7816e 137 SUPERFAMILY SSF46785 5 132 5.39E-27 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20305 2b0e5b7336afd49e58dac6b46df7816e 137 SMART SM00347 24 123 1.3E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_20305 2b0e5b7336afd49e58dac6b46df7816e 137 Pfam PF13463 Winged helix DNA-binding domain 34 95 5.0E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SUPERFAMILY SSF56059 128 399 9.37E-110 T 01-11-2018 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SMART SM00851 949 1036 4.9E-31 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SMART SM01096 420 540 9.0E-61 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Pfam PF02142 MGS-like domain 950 1036 2.5E-21 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Gene3D G3DSA:3.40.50.20 547 655 2.0E-46 T 01-11-2018 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SUPERFAMILY SSF52440 550 668 3.74E-48 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SUPERFAMILY SSF52335 929 1052 1.31E-33 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SUPERFAMILY SSF56059 666 927 3.89E-99 T 01-11-2018 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1063 13.554 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Gene3D G3DSA:3.40.50.20 1 116 4.2E-48 T 01-11-2018 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.203 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-64 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-64 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.3E-64 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-64 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-64 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.3E-64 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-64 T 01-11-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 01-11-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Gene3D G3DSA:1.10.1030.10 402 546 2.3E-43 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 667 867 7.7E-36 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 9.6E-82 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SUPERFAMILY SSF48108 395 546 1.7E-47 T 01-11-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Gene3D G3DSA:3.30.470.20 120 401 8.8E-126 T 01-11-2018 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Gene3D G3DSA:3.40.50.1380 931 1061 1.4E-38 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Gene3D G3DSA:3.30.470.20 659 929 3.0E-105 T 01-11-2018 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 SUPERFAMILY SSF52440 1 127 2.3E-49 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_07855 2eaece011d6084c593f14fd6dcf036ad 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 4.5E-40 T 01-11-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_09650 785a79d15f540e0d9596bf71e32e098f 260 Pfam PF00535 Glycosyl transferase family 2 5 133 2.5E-27 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09650 785a79d15f540e0d9596bf71e32e098f 260 Gene3D G3DSA:3.90.550.10 1 250 3.3E-44 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09650 785a79d15f540e0d9596bf71e32e098f 260 SUPERFAMILY SSF53448 3 229 5.63E-48 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 Gene3D G3DSA:1.10.3430.10 2 420 5.1E-136 T 01-11-2018 IPR029020 Ammonium/urea transporter DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 ProSitePatterns PS01219 Ammonium transporters signature. 155 180 - T 01-11-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 Pfam PF00909 Ammonium Transporter Family 10 407 3.9E-117 T 01-11-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 SUPERFAMILY SSF111352 7 384 2.75E-109 T 01-11-2018 DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 TIGRFAM TIGR00836 amt: ammonium transporter 9 407 1.7E-121 T 01-11-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 PRINTS PR00342 Rhesus blood group protein signature 264 277 3.7E-8 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 PRINTS PR00342 Rhesus blood group protein signature 162 177 3.7E-8 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 PRINTS PR00342 Rhesus blood group protein signature 48 65 3.7E-8 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 DOE78_06845 c908535f463f95b337bc877e1cbf1f28 421 PRINTS PR00342 Rhesus blood group protein signature 199 217 3.7E-8 T 01-11-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 DOE78_04335 f7163e670f544011c0cba3ac24e758f1 430 Gene3D G3DSA:2.115.10.20 27 342 6.0E-87 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_04335 f7163e670f544011c0cba3ac24e758f1 430 Pfam PF04616 Glycosyl hydrolases family 43 29 326 4.5E-52 T 01-11-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DOE78_04335 f7163e670f544011c0cba3ac24e758f1 430 SUPERFAMILY SSF75005 28 336 3.14E-68 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_04335 f7163e670f544011c0cba3ac24e758f1 430 Pfam PF16369 C-terminal of Glycosyl hydrolases family 43 330 426 2.8E-12 T 01-11-2018 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 PIRSF PIRSF005900 1 144 2.4E-46 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 SUPERFAMILY SSF47240 4 144 1.11E-40 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 ProSitePatterns PS00818 Dps protein family signature 1. 25 41 - T 01-11-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 ProSitePatterns PS00819 Dps protein family signature 2. 51 65 - T 01-11-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 Pfam PF00210 Ferritin-like domain 5 143 9.1E-30 T 01-11-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 Gene3D G3DSA:1.20.1260.10 1 143 2.3E-50 T 01-11-2018 IPR012347 Ferritin-like DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 25 41 2.3E-13 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 120 138 2.3E-13 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_01185 9a88539d876a0bc59e45e3a3224473bd 144 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 49 65 2.3E-13 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_17505 f693c02aad0514744288457da0563db7 611 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.2E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.2E-14 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 184 4.5E-19 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.7E-13 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 Gene3D G3DSA:3.40.50.300 9 194 3.3E-74 T 01-11-2018 DOE78_17505 f693c02aad0514744288457da0563db7 611 Gene3D G3DSA:2.40.30.10 195 294 4.1E-37 T 01-11-2018 DOE78_17505 f693c02aad0514744288457da0563db7 611 SUPERFAMILY SSF50447 175 297 1.35E-33 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_17505 f693c02aad0514744288457da0563db7 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site DOE78_17505 f693c02aad0514744288457da0563db7 611 Pfam PF00679 Elongation factor G C-terminus 408 495 3.0E-25 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like DOE78_17505 f693c02aad0514744288457da0563db7 611 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 01-11-2018 IPR006297 Elongation factor 4 GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 SUPERFAMILY SSF52540 9 214 2.64E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17505 f693c02aad0514744288457da0563db7 611 Gene3D G3DSA:3.30.70.3380 377 488 5.6E-45 T 01-11-2018 DOE78_17505 f693c02aad0514744288457da0563db7 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 316.513 T 01-11-2018 IPR006297 Elongation factor 4 GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 6.9E-52 T 01-11-2018 IPR013842 GTP-binding protein LepA, C-terminal DOE78_17505 f693c02aad0514744288457da0563db7 611 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 6.8E-53 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_17505 f693c02aad0514744288457da0563db7 611 Gene3D G3DSA:3.30.70.870 295 376 3.7E-36 T 01-11-2018 DOE78_17505 f693c02aad0514744288457da0563db7 611 SUPERFAMILY SSF54980 408 503 1.58E-26 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_17505 f693c02aad0514744288457da0563db7 611 SMART SM00838 410 495 4.7E-4 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like DOE78_17505 f693c02aad0514744288457da0563db7 611 SUPERFAMILY SSF54980 301 379 1.19E-18 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_17505 f693c02aad0514744288457da0563db7 611 Gene3D G3DSA:3.30.70.2570 489 563 4.1E-35 T 01-11-2018 IPR038363 LepA, C-terminal domain superfamily DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 5.8E-10 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 5.8E-10 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.8E-10 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 5.8E-10 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 Gene3D G3DSA:3.50.50.60 7 301 1.9E-82 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 SUPERFAMILY SSF51905 2 301 5.28E-38 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 292 1.1E-54 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 Gene3D G3DSA:3.50.50.60 113 236 1.9E-82 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 Gene3D G3DSA:3.30.390.30 312 394 2.3E-6 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 4.1E-21 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 4.1E-21 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.1E-21 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 4.1E-21 T 01-11-2018 DOE78_04220 eafe22afd40d18b6d05b18d6f3c00fe1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 4.1E-21 T 01-11-2018 DOE78_03755 e292b320d91fb017c631030aa72ad7df 229 Gene3D G3DSA:3.40.50.2300 1 129 1.3E-37 T 01-11-2018 DOE78_03755 e292b320d91fb017c631030aa72ad7df 229 Gene3D G3DSA:1.10.10.10 130 229 3.4E-34 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_03755 e292b320d91fb017c631030aa72ad7df 229 SUPERFAMILY SSF52172 1 184 9.05E-41 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_03755 e292b320d91fb017c631030aa72ad7df 229 Pfam PF00072 Response regulator receiver domain 4 113 3.8E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03755 e292b320d91fb017c631030aa72ad7df 229 SMART SM00862 151 227 1.9E-27 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_03755 e292b320d91fb017c631030aa72ad7df 229 SMART SM00448 2 112 3.4E-39 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03755 e292b320d91fb017c631030aa72ad7df 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 5.5E-27 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 SMART SM00388 612 680 1.7E-22 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 474 599 4.9E-9 T 01-11-2018 IPR000014 PAS domain DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 728 835 2.4E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 SMART SM00387 727 837 1.5E-34 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Gene3D G3DSA:1.10.287.130 599 677 2.5E-26 T 01-11-2018 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 PRINTS PR00344 Bacterial sensor protein C-terminal signature 764 778 4.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 792 4.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 PRINTS PR00344 Bacterial sensor protein C-terminal signature 797 815 4.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 834 4.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Gene3D G3DSA:3.30.450.20 465 597 9.8E-15 T 01-11-2018 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Pfam PF00512 His Kinase A (phospho-acceptor) domain 612 680 6.0E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Pfam PF02743 Cache domain 55 364 2.2E-17 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Gene3D G3DSA:3.30.565.10 678 835 8.9E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 SUPERFAMILY SSF55785 466 589 1.2E-10 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Gene3D G3DSA:3.30.450.20 229 384 5.5E-22 T 01-11-2018 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 SUPERFAMILY SSF47384 597 681 4.9E-23 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 SUPERFAMILY SSF55874 669 836 1.11E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_21510 31be887986621a157cef25b53aa4ed6e 843 Pfam PF08448 PAS fold 488 593 2.4E-6 T 01-11-2018 IPR013656 PAS fold-4 DOE78_02895 3a147946d86ca6ae5390977fd854f687 311 Gene3D G3DSA:3.40.50.300 1 237 1.9E-71 T 01-11-2018 DOE78_02895 3a147946d86ca6ae5390977fd854f687 311 SUPERFAMILY SSF52540 2 222 2.04E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02895 3a147946d86ca6ae5390977fd854f687 311 SMART SM00382 26 208 5.4E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_02895 3a147946d86ca6ae5390977fd854f687 311 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_02895 3a147946d86ca6ae5390977fd854f687 311 Pfam PF00005 ABC transporter 18 160 1.6E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_07435 5d82410ae35c7017c2e4bcc8713088e2 151 Gene3D G3DSA:2.30.110.10 1 150 8.5E-64 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 DOE78_07435 5d82410ae35c7017c2e4bcc8713088e2 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 90 9.7E-12 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DOE78_07435 5d82410ae35c7017c2e4bcc8713088e2 151 SUPERFAMILY SSF50475 4 117 3.52E-12 T 01-11-2018 DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 SMART SM00382 379 565 1.5E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 Pfam PF00664 ABC transporter transmembrane region 40 308 3.0E-45 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 SUPERFAMILY SSF52540 349 587 1.05E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 SUPERFAMILY SSF90123 27 339 3.92E-64 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 Gene3D G3DSA:1.20.1560.10 6 339 1.7E-67 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 Gene3D G3DSA:3.40.50.300 347 595 2.7E-90 T 01-11-2018 DOE78_20385 6e11e38f83a07edd619387bbe5bc7e67 599 Pfam PF00005 ABC transporter 371 519 4.7E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 Gene3D G3DSA:3.30.420.40 7 358 3.6E-158 T 01-11-2018 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 Pfam PF00871 Acetokinase family 8 345 3.3E-73 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 PIRSF PIRSF036458 4 359 1.5E-174 T 01-11-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 PRINTS PR00471 Acetate kinase family signature 8 19 4.3E-17 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 PRINTS PR00471 Acetate kinase family signature 277 290 4.3E-17 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 PRINTS PR00471 Acetate kinase family signature 182 203 4.3E-17 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 PRINTS PR00471 Acetate kinase family signature 300 316 4.3E-17 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 Gene3D G3DSA:3.30.420.40 140 335 3.6E-158 T 01-11-2018 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 357 1.5E-173 T 01-11-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 SUPERFAMILY SSF53067 6 175 4.63E-71 T 01-11-2018 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 182 199 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 SUPERFAMILY SSF53067 120 351 7.07E-56 T 01-11-2018 DOE78_16770 20c941c4acfd9a0342ebc190c7810ae6 369 Hamap MF_00542 Probable butyrate kinase [buk]. 1 369 168.874 T 01-11-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 5 531 2.0E-123 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 PIRSF PIRSF004862 1 531 1.2E-104 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 Pfam PF08345 Flagellar M-ring protein C-terminal 255 401 3.7E-21 T 01-11-2018 IPR013556 Flagellar M-ring C-terminal DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 Gene3D G3DSA:3.30.300.30 128 220 4.6E-8 T 01-11-2018 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 PRINTS PR01009 Flagellar M-ring protein signature 121 139 2.7E-23 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 PRINTS PR01009 Flagellar M-ring protein signature 268 286 2.7E-23 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 PRINTS PR01009 Flagellar M-ring protein signature 153 167 2.7E-23 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 PRINTS PR01009 Flagellar M-ring protein signature 197 215 2.7E-23 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 PRINTS PR01009 Flagellar M-ring protein signature 348 372 2.7E-23 T 01-11-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DOE78_08165 3f314cc31383726e4ecae1c3bb429386 531 Pfam PF01514 Secretory protein of YscJ/FliF family 31 219 5.4E-56 T 01-11-2018 IPR006182 Secretory protein YscJ/FliF DOE78_10590 a1ef401622cca2085eda0c07f5fabb4b 173 Pfam PF03061 Thioesterase superfamily 28 101 1.6E-14 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DOE78_10590 a1ef401622cca2085eda0c07f5fabb4b 173 Gene3D G3DSA:3.10.129.10 1 168 3.2E-52 T 01-11-2018 DOE78_10590 a1ef401622cca2085eda0c07f5fabb4b 173 SUPERFAMILY SSF54637 8 156 2.07E-41 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 Gene3D G3DSA:3.40.50.880 1 188 1.6E-63 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 Pfam PF00117 Glutamine amidotransferase class-I 3 187 1.1E-53 T 01-11-2018 IPR017926 Glutamine amidotransferase DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.4E-35 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00097 Anthranilate synthase component II signature 47 56 8.4E-35 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00097 Anthranilate synthase component II signature 165 178 8.4E-35 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00097 Anthranilate synthase component II signature 119 131 8.4E-35 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00097 Anthranilate synthase component II signature 99 107 8.4E-35 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00097 Anthranilate synthase component II signature 74 85 8.4E-35 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-7 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-7 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.8E-14 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 6.8E-14 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.8E-14 T 01-11-2018 DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 SUPERFAMILY SSF52317 1 188 2.1E-53 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_15065 2cfee7cf17a9d36f09240da162f7d3de 203 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 6.9E-73 T 01-11-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_00415 6cd16c48f85f64bfd27518359cf415e1 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 291 41.453 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DOE78_00415 6cd16c48f85f64bfd27518359cf415e1 293 SUPERFAMILY SSF64397 2 241 1.44E-78 T 01-11-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DOE78_00415 6cd16c48f85f64bfd27518359cf415e1 293 Gene3D G3DSA:3.90.1280.10 237 292 1.3E-22 T 01-11-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DOE78_00415 6cd16c48f85f64bfd27518359cf415e1 293 Pfam PF01430 Hsp33 protein 3 280 9.7E-91 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DOE78_00415 6cd16c48f85f64bfd27518359cf415e1 293 PIRSF PIRSF005261 1 292 4.7E-80 T 01-11-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DOE78_00415 6cd16c48f85f64bfd27518359cf415e1 293 SUPERFAMILY SSF118352 232 289 8.37E-20 T 01-11-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DOE78_00415 6cd16c48f85f64bfd27518359cf415e1 293 Gene3D G3DSA:3.55.30.10 2 236 1.8E-94 T 01-11-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 TIGRFAM TIGR00417 speE: spermidine synthase 4 269 9.4E-120 T 01-11-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 Gene3D G3DSA:3.40.50.150 53 275 8.7E-77 T 01-11-2018 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 Pfam PF17284 Spermidine synthase tetramerisation domain 3 53 9.9E-18 T 01-11-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 Gene3D G3DSA:2.30.140.10 2 52 4.4E-24 T 01-11-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 41.335 T 01-11-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 Pfam PF01564 Spermine/spermidine synthase domain 58 236 2.4E-69 T 01-11-2018 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 01-11-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DOE78_23920 89e823686ed3f82163ce49d5518fb25e 276 SUPERFAMILY SSF53335 2 275 4.74E-87 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 01-11-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 Gene3D G3DSA:3.30.230.40 91 195 2.4E-40 T 01-11-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 01-11-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 Gene3D G3DSA:3.30.230.40 1 90 3.5E-36 T 01-11-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 1.1E-64 T 01-11-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 SUPERFAMILY SSF54211 88 180 1.43E-35 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 SUPERFAMILY SSF54211 3 87 2.4E-31 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_22180 e399da88b353f1cbc5e9087cde47d7d7 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 42.585 T 01-11-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DOE78_12140 06b34b05010fd237cab9f4ee02b509c5 205 PIRSF PIRSF033634 1 205 4.8E-39 T 01-11-2018 IPR017018 Uncharacterised conserved protein UCP033634 DOE78_12140 06b34b05010fd237cab9f4ee02b509c5 205 SUPERFAMILY SSF53474 24 185 1.35E-11 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_12140 06b34b05010fd237cab9f4ee02b509c5 205 Gene3D G3DSA:3.40.50.1820 22 194 9.0E-9 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10180 a42f12934b71a3611a3d4263bf814347 474 Gene3D G3DSA:1.20.1740.10 10 474 1.2E-71 T 01-11-2018 DOE78_10180 a42f12934b71a3611a3d4263bf814347 474 PIRSF PIRSF006060 1 473 2.5E-89 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_10180 a42f12934b71a3611a3d4263bf814347 474 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DOE78_10180 a42f12934b71a3611a3d4263bf814347 474 Pfam PF00324 Amino acid permease 20 459 2.9E-126 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 SUPERFAMILY SSF82693 133 321 5.93E-13 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 SUPERFAMILY SSF82714 183 266 1.44E-6 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:3.30.70.1430 41 805 1.7E-260 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:3.30.70.1430 559 656 1.7E-260 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 SUPERFAMILY SSF82714 712 795 3.01E-8 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Pfam PF00873 AcrB/AcrD/AcrF family 5 1014 2.7E-195 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:1.20.1640.10 11 508 1.7E-260 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 SUPERFAMILY SSF82866 796 1019 1.83E-46 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.0E-46 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 3.0E-46 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.0E-46 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.0E-46 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 3.0E-46 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.0E-46 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.0E-46 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:1.20.1640.10 509 1011 1.7E-260 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 SUPERFAMILY SSF82693 41 131 9.94E-16 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:3.30.70.1440 657 854 1.7E-260 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:3.30.2090.10 177 271 1.7E-260 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:3.30.70.1320 133 327 1.7E-260 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 SUPERFAMILY SSF82866 293 494 2.62E-44 T 01-11-2018 DOE78_20685 8eb1aceccde013d71b6daa3aad6827db 1028 Gene3D G3DSA:3.30.2090.10 708 797 1.7E-260 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Pfam PF03129 Anticodon binding domain 549 638 9.5E-24 T 01-11-2018 IPR004154 Anticodon-binding DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 SUPERFAMILY SSF52954 535 638 8.31E-32 T 01-11-2018 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 640 2.3E-240 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 SUPERFAMILY SSF81271 5 64 4.58E-17 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Gene3D G3DSA:3.30.980.10 72 224 5.3E-65 T 01-11-2018 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Gene3D G3DSA:3.30.54.20 133 189 5.3E-65 T 01-11-2018 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 SUPERFAMILY SSF55681 245 534 3.78E-97 T 01-11-2018 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 4.7E-15 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 537 3.4E-33 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Gene3D G3DSA:3.30.930.10 227 540 1.8E-117 T 01-11-2018 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Pfam PF02824 TGS domain 7 64 1.5E-14 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 2.3E-48 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 2.3E-48 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 2.3E-48 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 2.3E-48 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 2.3E-48 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 SUPERFAMILY SSF55186 66 243 5.49E-67 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Gene3D G3DSA:3.40.50.800 541 643 5.1E-33 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 643 35.237 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 Gene3D G3DSA:3.10.20.30 2 65 3.5E-26 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_18360 6d6dbb4c5ba9435654dd904ec1e68040 643 SMART SM00863 172 221 5.8E-24 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_16005 fef99292b76b426bd00c0f2f18703ef0 198 Pfam PF07187 Protein of unknown function (DUF1405) 24 182 5.0E-57 T 01-11-2018 IPR009845 Protein of unknown function DUF1405 DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 Gene3D G3DSA:1.10.40.50 227 294 8.6E-23 T 01-11-2018 DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 SUPERFAMILY SSF52540 65 291 3.64E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 Pfam PF16745 RsgA N-terminal domain 3 57 2.8E-24 T 01-11-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 SUPERFAMILY SSF50249 1 64 1.07E-16 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 291 38.523 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 Gene3D G3DSA:2.40.50.140 1 62 1.6E-26 T 01-11-2018 DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 Gene3D G3DSA:3.40.50.300 63 226 1.4E-48 T 01-11-2018 DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 Pfam PF03193 RsgA GTPase 60 226 4.6E-62 T 01-11-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DOE78_07950 4c78bfb6b3288b9b40702f3fe3d880f7 294 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 40 281 8.7E-90 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 Gene3D G3DSA:3.30.420.10 1 169 1.5E-44 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 Pfam PF04851 Type III restriction enzyme, res subunit 258 486 2.2E-9 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 SMART SM00479 4 171 3.9E-41 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 SMART SM00487 254 512 0.0028 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 SUPERFAMILY SSF53098 4 360 2.11E-49 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 166 8.8E-26 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 4 932 3.9E-261 T 01-11-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 Pfam PF00929 Exonuclease 6 162 4.5E-27 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 Gene3D G3DSA:3.40.50.300 256 521 6.9E-43 T 01-11-2018 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 Pfam PF13307 Helicase C-terminal domain 749 913 1.9E-39 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 1 932 27.88 T 01-11-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 SMART SM00491 766 900 5.8E-39 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 SUPERFAMILY SSF52540 271 894 5.0E-26 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15935 87ee07b9665c056067ba6c32800b2703 932 Gene3D G3DSA:3.40.50.300 723 928 1.4E-41 T 01-11-2018 DOE78_05245 964c7139b44c8b632d63fdbd002afa5b 156 PIRSF PIRSF000239 1 150 2.3E-27 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_05245 964c7139b44c8b632d63fdbd002afa5b 156 SUPERFAMILY SSF52833 3 152 7.93E-53 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_05245 964c7139b44c8b632d63fdbd002afa5b 156 Gene3D G3DSA:3.40.30.10 1 155 1.5E-52 T 01-11-2018 DOE78_05245 964c7139b44c8b632d63fdbd002afa5b 156 Pfam PF00578 AhpC/TSA family 4 131 1.0E-38 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 3.1E-80 T 01-11-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 9.6E-21 T 01-11-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 PIRSF PIRSF001438 1 310 4.4E-122 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 SUPERFAMILY SSF54782 221 308 1.96E-21 T 01-11-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 01-11-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 Gene3D G3DSA:3.40.190.10 4 209 3.2E-85 T 01-11-2018 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 Gene3D G3DSA:3.40.190.10 101 201 3.2E-85 T 01-11-2018 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 2.8E-111 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.7E-50 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.7E-50 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.7E-50 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 1.7E-50 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.7E-50 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 SUPERFAMILY SSF53850 2 216 1.76E-82 T 01-11-2018 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.391 T 01-11-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18050 b403eca7ba8429b53f62539361b2966f 311 Gene3D G3DSA:3.30.160.40 221 304 1.6E-30 T 01-11-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 PRINTS PR00050 Cold shock protein signature 39 57 3.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 PRINTS PR00050 Cold shock protein signature 24 33 3.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 PRINTS PR00050 Cold shock protein signature 4 19 3.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 PIRSF PIRSF002599 1 66 2.6E-24 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 01-11-2018 IPR019844 Cold-shock conserved site DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 SUPERFAMILY SSF50249 1 65 1.33E-24 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 SMART SM00357 3 66 5.3E-32 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.1E-30 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_21860 6d3d1db6c140c8fda745e24285e7fce5 66 Gene3D G3DSA:2.40.50.140 1 66 2.8E-30 T 01-11-2018 DOE78_01015 362c1fc3b51bf47021ddbebcfd9edc12 275 SUPERFAMILY SSF143597 40 240 2.88E-71 T 01-11-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DOE78_01015 362c1fc3b51bf47021ddbebcfd9edc12 275 PIRSF PIRSF004793 3 270 2.1E-97 T 01-11-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 DOE78_01015 362c1fc3b51bf47021ddbebcfd9edc12 275 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 235 9.2E-44 T 01-11-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal DOE78_01015 362c1fc3b51bf47021ddbebcfd9edc12 275 Hamap MF_01499 Diadenylate cyclase [dacA]. 1 254 34.272 T 01-11-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 DOE78_01015 362c1fc3b51bf47021ddbebcfd9edc12 275 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 3 254 3.3E-100 T 01-11-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 DOE78_01015 362c1fc3b51bf47021ddbebcfd9edc12 275 Gene3D G3DSA:3.40.1700.10 101 255 4.5E-63 T 01-11-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DOE78_12885 caa4cf79b67b2dc91a55e7ae61a5b28c 241 Pfam PF08281 Sigma-70, region 4 112 164 2.5E-11 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_12885 caa4cf79b67b2dc91a55e7ae61a5b28c 241 SUPERFAMILY SSF88659 112 170 7.48E-10 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_12885 caa4cf79b67b2dc91a55e7ae61a5b28c 241 Gene3D G3DSA:1.10.10.10 109 168 6.9E-12 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12885 caa4cf79b67b2dc91a55e7ae61a5b28c 241 SUPERFAMILY SSF88946 21 97 8.24E-10 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_12885 caa4cf79b67b2dc91a55e7ae61a5b28c 241 Gene3D G3DSA:1.10.1740.10 10 92 2.9E-9 T 01-11-2018 DOE78_12885 caa4cf79b67b2dc91a55e7ae61a5b28c 241 Pfam PF04542 Sigma-70 region 2 26 90 1.1E-8 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_12885 caa4cf79b67b2dc91a55e7ae61a5b28c 241 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 166 2.4E-13 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_04045 1ee2c8f14e471f5020d92ff677f05103 793 Gene3D G3DSA:1.10.600.10 505 793 7.6E-69 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_04045 1ee2c8f14e471f5020d92ff677f05103 793 SUPERFAMILY SSF48576 229 398 8.31E-6 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_04045 1ee2c8f14e471f5020d92ff677f05103 793 Pfam PF00348 Polyprenyl synthetase 532 754 7.2E-45 T 01-11-2018 IPR000092 Polyprenyl synthetase GO:0008299 DOE78_04045 1ee2c8f14e471f5020d92ff677f05103 793 SUPERFAMILY SSF48576 504 774 1.15E-62 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_04045 1ee2c8f14e471f5020d92ff677f05103 793 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 583 599 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site DOE78_09715 c321f29ace34b42540ad0696e554619d 66 Gene3D G3DSA:3.40.50.2300 1 62 9.5E-17 T 01-11-2018 DOE78_09715 c321f29ace34b42540ad0696e554619d 66 Pfam PF00072 Response regulator receiver domain 6 59 4.2E-13 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_09715 c321f29ace34b42540ad0696e554619d 66 SUPERFAMILY SSF52172 1 60 2.85E-18 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 Gene3D G3DSA:3.30.420.40 250 499 5.5E-77 T 01-11-2018 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 TIGRFAM TIGR01312 XylB: xylulokinase 5 485 3.3E-200 T 01-11-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 SUPERFAMILY SSF53067 249 490 1.31E-67 T 01-11-2018 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 442 1.3E-32 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 PIRSF PIRSF000538 1 496 2.2E-168 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 Gene3D G3DSA:3.30.420.40 1 247 2.7E-84 T 01-11-2018 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 355 375 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 SUPERFAMILY SSF53067 2 249 4.17E-80 T 01-11-2018 DOE78_20120 de951fbc978f0c085eadb7468983d16f 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 1.0E-71 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DOE78_20465 346451e6f758cf2ac39936b22ab33005 351 SUPERFAMILY SSF53448 4 221 5.3E-54 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20465 346451e6f758cf2ac39936b22ab33005 351 Gene3D G3DSA:3.90.550.10 2 203 8.5E-52 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20465 346451e6f758cf2ac39936b22ab33005 351 Pfam PF00535 Glycosyl transferase family 2 6 129 5.5E-34 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 Gene3D G3DSA:1.10.3090.10 143 334 5.0E-38 T 01-11-2018 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 SUPERFAMILY SSF81891 140 396 1.44E-49 T 01-11-2018 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 Pfam PF01743 Poly A polymerase head domain 22 142 5.4E-35 T 01-11-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 249 393 1.7E-32 T 01-11-2018 IPR032810 CCA-adding enzyme, C-terminal DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 SUPERFAMILY SSF81301 5 138 4.17E-41 T 01-11-2018 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 170 226 1.4E-15 T 01-11-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 Hamap MF_01263 CCA-adding enzyme [cca]. 2 397 39.164 T 01-11-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 Gene3D G3DSA:1.10.246.80 341 399 1.4E-18 T 01-11-2018 DOE78_15960 0f63be2dbed2662f038500da4a82a7ca 399 Gene3D G3DSA:3.30.460.10 2 142 1.3E-51 T 01-11-2018 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 1.5E-61 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 1.5E-61 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 1.5E-61 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 1.5E-61 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 1.5E-61 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 SUPERFAMILY SSF53067 8 144 2.09E-38 T 01-11-2018 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 SUPERFAMILY SSF53067 147 329 2.63E-49 T 01-11-2018 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 Gene3D G3DSA:3.90.640.10 183 256 3.2E-131 T 01-11-2018 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 Gene3D G3DSA:3.30.420.40 9 324 3.2E-131 T 01-11-2018 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 Pfam PF06723 MreB/Mbl protein 7 331 9.4E-151 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 Gene3D G3DSA:3.30.420.40 151 314 3.2E-131 T 01-11-2018 DOE78_17975 5d615a8708decad4d23dbe40850aadf7 340 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 333 1.5E-160 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_21575 f12170f382b3e4939cbce29665f039ea 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 7.9E-19 T 01-11-2018 IPR027470 Cation efflux protein, cytoplasmic domain DOE78_21575 f12170f382b3e4939cbce29665f039ea 298 SUPERFAMILY SSF161111 10 210 3.79E-56 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_21575 f12170f382b3e4939cbce29665f039ea 298 SUPERFAMILY SSF160240 212 290 7.98E-19 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DOE78_21575 f12170f382b3e4939cbce29665f039ea 298 Gene3D G3DSA:3.30.70.1350 210 290 1.5E-16 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DOE78_21575 f12170f382b3e4939cbce29665f039ea 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 289 2.7E-70 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_21575 f12170f382b3e4939cbce29665f039ea 298 Gene3D G3DSA:1.20.1510.10 13 209 1.4E-56 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_21575 f12170f382b3e4939cbce29665f039ea 298 Pfam PF01545 Cation efflux family 17 208 1.9E-52 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 PIRSF PIRSF001235 5 415 4.5E-136 T 01-11-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 Gene3D G3DSA:3.30.70.360 217 332 7.1E-137 T 01-11-2018 DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 SUPERFAMILY SSF53187 5 413 2.73E-87 T 01-11-2018 DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 Gene3D G3DSA:3.40.630.10 24 408 7.1E-137 T 01-11-2018 DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 412 1.0E-144 T 01-11-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 Pfam PF01546 Peptidase family M20/M25/M40 81 411 9.9E-28 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 SUPERFAMILY SSF55031 217 333 6.73E-27 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_13275 03a9bac92ab2b9ed869037b3d771b2ce 415 Pfam PF07687 Peptidase dimerisation domain 214 316 6.3E-6 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_14135 1318143401983a2883b2e3a470b98a35 392 Gene3D G3DSA:3.40.50.80 238 392 2.8E-57 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_14135 1318143401983a2883b2e3a470b98a35 392 Pfam PF00175 Oxidoreductase NAD-binding domain 250 356 7.9E-18 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 SUPERFAMILY SSF63380 19 238 3.93E-65 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel DOE78_14135 1318143401983a2883b2e3a470b98a35 392 Pfam PF00667 FAD binding domain 20 215 1.6E-31 T 01-11-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 Gene3D G3DSA:1.20.990.10 68 177 9.3E-74 T 01-11-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 Gene3D G3DSA:2.40.30.10 20 232 9.3E-74 T 01-11-2018 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 SUPERFAMILY SSF52343 237 392 8.25E-51 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 283 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 249 268 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 179 186 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 58 68 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 221 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 287 298 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 318 334 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_14135 1318143401983a2883b2e3a470b98a35 392 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 341 349 3.4E-31 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_05730 1e78891797308d3456807d5bcd2623b8 667 Pfam PF02421 Ferrous iron transport protein B 2 152 1.4E-59 T 01-11-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 DOE78_05730 1e78891797308d3456807d5bcd2623b8 667 Pfam PF07664 Ferrous iron transport protein B C terminus 454 506 1.0E-21 T 01-11-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 DOE78_05730 1e78891797308d3456807d5bcd2623b8 667 Pfam PF07670 Nucleoside recognition 511 635 1.8E-31 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_05730 1e78891797308d3456807d5bcd2623b8 667 Pfam PF07670 Nucleoside recognition 350 444 4.4E-15 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_05730 1e78891797308d3456807d5bcd2623b8 667 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 7 632 7.9E-192 T 01-11-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 DOE78_05730 1e78891797308d3456807d5bcd2623b8 667 Gene3D G3DSA:3.40.50.300 1 193 7.5E-38 T 01-11-2018 DOE78_05730 1e78891797308d3456807d5bcd2623b8 667 SUPERFAMILY SSF52540 1 157 2.35E-32 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Gene3D G3DSA:1.10.10.10 5 69 8.8E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 SUPERFAMILY SSF54631 182 307 1.77E-30 T 01-11-2018 DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 1.6E-6 T 01-11-2018 DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Pfam PF07085 DRTGG domain 76 178 5.5E-30 T 01-11-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Gene3D G3DSA:3.10.580.10 186 314 3.5E-26 T 01-11-2018 DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 SUPERFAMILY SSF75138 72 185 2.22E-28 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 SUPERFAMILY SSF46785 5 54 4.28E-8 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Gene3D G3DSA:3.10.129.10 326 438 1.9E-10 T 01-11-2018 DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Gene3D G3DSA:3.40.1390.20 70 178 1.4E-25 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 SUPERFAMILY SSF54637 339 437 1.09E-19 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 SMART SM00116 259 307 4.5E-5 T 01-11-2018 IPR000644 CBS domain DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 SMART SM00116 200 248 9.7E-4 T 01-11-2018 IPR000644 CBS domain DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Pfam PF00571 CBS domain 253 307 6.8E-10 T 01-11-2018 IPR000644 CBS domain DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Pfam PF00571 CBS domain 191 244 1.5E-5 T 01-11-2018 IPR000644 CBS domain DOE78_18530 5115cc371c50b7584bdbce3b13805c3b 439 Pfam PF03061 Thioesterase superfamily 353 424 1.8E-11 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 SUPERFAMILY SSF63380 234 455 6.12E-63 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 Gene3D G3DSA:3.40.50.80 455 609 3.0E-58 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 Gene3D G3DSA:2.40.30.10 237 449 8.5E-73 T 01-11-2018 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 466 485 1.8E-27 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 504 515 1.8E-27 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 535 551 1.8E-27 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 491 500 1.8E-27 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 396 403 1.8E-27 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 558 566 1.8E-27 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 275 285 1.8E-27 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 Gene3D G3DSA:3.40.50.360 59 223 8.9E-51 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00369 Flavodoxin signature 150 160 9.7E-14 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00369 Flavodoxin signature 118 129 9.7E-14 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00369 Flavodoxin signature 70 83 9.7E-14 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PRINTS PR00369 Flavodoxin signature 174 193 9.7E-14 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 PIRSF PIRSF000207 1 609 3.4E-270 T 01-11-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 Pfam PF00258 Flavodoxin 71 195 1.9E-30 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 Gene3D G3DSA:1.20.990.10 285 394 8.5E-73 T 01-11-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 SUPERFAMILY SSF52218 67 212 3.05E-48 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 SUPERFAMILY SSF52343 454 609 1.44E-50 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 Pfam PF00667 FAD binding domain 237 432 4.9E-35 T 01-11-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 6 609 1.7E-269 T 01-11-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01125 6281c09629840a2c150ce91230cc62ce 609 Pfam PF00175 Oxidoreductase NAD-binding domain 467 573 5.3E-18 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 Hamap MF_01953 Urease subunit alpha [ureC]. 3 569 57.741 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 SUPERFAMILY SSF51338 5 476 2.32E-59 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 Gene3D G3DSA:2.30.40.10 5 482 2.3E-293 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 Gene3D G3DSA:3.20.20.140 131 569 2.3E-293 T 01-11-2018 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 ProSitePatterns PS00145 Urease active site. 319 335 - T 01-11-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 569 1.5E-302 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 5.9E-53 T 01-11-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 01-11-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 Pfam PF01979 Amidohydrolase family 127 455 5.3E-81 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 297 314 1.5E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 1.5E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 336 352 1.5E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 1.5E-34 T 01-11-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02920 f222939fc9edfaab252d43089ae0f8ed 569 SUPERFAMILY SSF51556 131 569 1.72E-203 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_03425 50cbd3c0b0c8b83b46945a47420ba464 109 Pfam PF08671 Anti-repressor SinI 71 98 1.6E-14 T 01-11-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 DOE78_03425 50cbd3c0b0c8b83b46945a47420ba464 109 Gene3D G3DSA:1.10.260.40 1 108 1.3E-29 T 01-11-2018 DOE78_03425 50cbd3c0b0c8b83b46945a47420ba464 109 SUPERFAMILY SSF47406 71 105 3.4E-14 T 01-11-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 DOE78_03425 50cbd3c0b0c8b83b46945a47420ba464 109 SMART SM00530 5 61 2.0E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_03425 50cbd3c0b0c8b83b46945a47420ba464 109 SUPERFAMILY SSF47413 1 65 3.38E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_03425 50cbd3c0b0c8b83b46945a47420ba464 109 Pfam PF01381 Helix-turn-helix 6 60 2.2E-15 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_23740 df397da005f589e89bb05fcc32e5f9d8 415 Pfam PF00464 Serine hydroxymethyltransferase 4 380 6.7E-181 T 01-11-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DOE78_23740 df397da005f589e89bb05fcc32e5f9d8 415 Gene3D G3DSA:3.90.1150.10 6 389 2.0E-189 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_23740 df397da005f589e89bb05fcc32e5f9d8 415 Gene3D G3DSA:3.40.640.10 33 283 2.0E-189 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_23740 df397da005f589e89bb05fcc32e5f9d8 415 SUPERFAMILY SSF53383 2 411 1.51E-184 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_23740 df397da005f589e89bb05fcc32e5f9d8 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 01-11-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DOE78_23740 df397da005f589e89bb05fcc32e5f9d8 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.914 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DOE78_23740 df397da005f589e89bb05fcc32e5f9d8 415 PIRSF PIRSF000412 1 414 2.2E-172 T 01-11-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 Gene3D G3DSA:3.30.70.600 65 102 1.3E-14 T 01-11-2018 IPR036838 Ribosomal protein S10 domain superfamily DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 Gene3D G3DSA:3.30.70.600 1 62 4.0E-21 T 01-11-2018 IPR036838 Ribosomal protein S10 domain superfamily DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.6E-20 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.6E-20 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.6E-20 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 SUPERFAMILY SSF54999 5 102 1.24E-38 T 01-11-2018 IPR036838 Ribosomal protein S10 domain superfamily DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.184 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.9E-47 T 01-11-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.0E-36 T 01-11-2018 IPR027486 Ribosomal protein S10 domain DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 SMART SM01403 7 101 2.8E-60 T 01-11-2018 IPR027486 Ribosomal protein S10 domain DOE78_00720 d3d1416c082aaa1921587aafc29b03f8 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 01-11-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 SMART SM00304 186 238 1.1E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 Pfam PF00672 HAMP domain 189 234 2.9E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 467 8.2E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 8.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 8.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 8.1E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 SUPERFAMILY SSF55874 301 466 3.54E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 Gene3D G3DSA:1.10.287.130 242 312 7.5E-20 T 01-11-2018 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 SMART SM00388 246 312 5.7E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 SMART SM00387 357 468 2.0E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 Gene3D G3DSA:3.30.565.10 313 468 9.5E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 SUPERFAMILY SSF158472 187 234 9.81E-8 T 01-11-2018 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 Gene3D G3DSA:1.20.1480.50 151 241 2.6E-12 T 01-11-2018 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 311 1.8E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05685 ba68163e967325d991ae7dc0c5f905e6 468 SUPERFAMILY SSF47384 229 313 2.55E-17 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_09365 45a4db27de86dede400e8d6e709300b0 153 PRINTS PR01166 Cytochrome c oxidase subunit II signature 73 94 3.1E-5 T 01-11-2018 DOE78_09365 45a4db27de86dede400e8d6e709300b0 153 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 3.1E-5 T 01-11-2018 DOE78_09365 45a4db27de86dede400e8d6e709300b0 153 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 152 3.1E-5 T 01-11-2018 DOE78_09365 45a4db27de86dede400e8d6e709300b0 153 Gene3D G3DSA:2.60.40.420 24 153 5.4E-34 T 01-11-2018 IPR008972 Cupredoxin DOE78_09365 45a4db27de86dede400e8d6e709300b0 153 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 78 150 3.5E-13 T 01-11-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09365 45a4db27de86dede400e8d6e709300b0 153 SUPERFAMILY SSF49503 57 152 4.53E-29 T 01-11-2018 IPR008972 Cupredoxin DOE78_09365 45a4db27de86dede400e8d6e709300b0 153 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 98 146 - T 01-11-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_10030 0370e81856f03131978816b5445c3d24 416 Gene3D G3DSA:3.40.50.620 16 233 5.6E-72 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_10030 0370e81856f03131978816b5445c3d24 416 SUPERFAMILY SSF55174 337 413 3.53E-18 T 01-11-2018 DOE78_10030 0370e81856f03131978816b5445c3d24 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 227 239 1.8E-24 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_10030 0370e81856f03131978816b5445c3d24 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 62 84 1.8E-24 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_10030 0370e81856f03131978816b5445c3d24 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 192 1.8E-24 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_10030 0370e81856f03131978816b5445c3d24 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 194 216 1.8E-24 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_10030 0370e81856f03131978816b5445c3d24 416 Gene3D G3DSA:3.10.290.10 343 414 1.2E-18 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_10030 0370e81856f03131978816b5445c3d24 416 SUPERFAMILY SSF52374 20 333 4.02E-89 T 01-11-2018 DOE78_10030 0370e81856f03131978816b5445c3d24 416 Gene3D G3DSA:1.10.240.10 234 342 5.3E-36 T 01-11-2018 DOE78_10030 0370e81856f03131978816b5445c3d24 416 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 14 414 45.129 T 01-11-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 DOE78_10030 0370e81856f03131978816b5445c3d24 416 SMART SM00363 354 415 2.7E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_10030 0370e81856f03131978816b5445c3d24 416 Pfam PF01479 S4 domain 358 396 5.2E-8 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_10030 0370e81856f03131978816b5445c3d24 416 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 20 414 5.3E-128 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_10030 0370e81856f03131978816b5445c3d24 416 Pfam PF00579 tRNA synthetases class I (W and Y) 46 334 4.2E-80 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_10030 0370e81856f03131978816b5445c3d24 416 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 68 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_12905 694527b59dcd05706a9e244c1f671f28 217 Gene3D G3DSA:3.40.50.620 3 215 8.0E-76 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_12905 694527b59dcd05706a9e244c1f671f28 217 PIRSF PIRSF006293 2 215 8.0E-79 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DOE78_12905 694527b59dcd05706a9e244c1f671f28 217 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 205 6.4E-84 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DOE78_12905 694527b59dcd05706a9e244c1f671f28 217 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 217 49.917 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DOE78_12905 694527b59dcd05706a9e244c1f671f28 217 SUPERFAMILY SSF52402 3 209 2.65E-68 T 01-11-2018 DOE78_12905 694527b59dcd05706a9e244c1f671f28 217 Pfam PF06508 Queuosine biosynthesis protein QueC 5 211 3.3E-85 T 01-11-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DOE78_19920 66bb0466f5b529a0ce787637d932d0e7 178 PIRSF PIRSF004682 1 167 7.6E-49 T 01-11-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DOE78_19920 66bb0466f5b529a0ce787637d932d0e7 178 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 147 2.2E-37 T 01-11-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DOE78_19920 66bb0466f5b529a0ce787637d932d0e7 178 Pfam PF13242 HAD-hyrolase-like 105 149 3.5E-9 T 01-11-2018 DOE78_19920 66bb0466f5b529a0ce787637d932d0e7 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 149 3.4E-29 T 01-11-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DOE78_19920 66bb0466f5b529a0ce787637d932d0e7 178 SUPERFAMILY SSF56784 2 150 1.82E-34 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_19920 66bb0466f5b529a0ce787637d932d0e7 178 Gene3D G3DSA:3.40.50.1000 3 175 3.9E-48 T 01-11-2018 IPR023214 HAD superfamily DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 SUPERFAMILY SSF52374 6 330 4.96E-97 T 01-11-2018 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Gene3D G3DSA:2.40.240.10 334 546 6.6E-79 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 29 40 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Gene3D G3DSA:1.10.1160.10 255 333 3.3E-32 T 01-11-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 334 528 8.5E-58 T 01-11-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Gene3D G3DSA:3.40.50.620 23 241 3.8E-102 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 PRINTS PR00987 Glutamyl-tRNA synthetase signature 55 68 1.8E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 38 1.8E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 PRINTS PR00987 Glutamyl-tRNA synthetase signature 40 51 1.8E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 PRINTS PR00987 Glutamyl-tRNA synthetase signature 204 214 1.8E-9 T 01-11-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 24 549 1.1E-223 T 01-11-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 23 331 1.7E-107 T 01-11-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 50.421 T 01-11-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Gene3D G3DSA:2.40.240.10 342 460 6.6E-79 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 Gene3D G3DSA:3.90.800.10 95 203 3.8E-102 T 01-11-2018 DOE78_13315 7f1a5e5fe58e0afa236acbd0ccf3d5a9 551 SUPERFAMILY SSF50715 334 547 1.52E-73 T 01-11-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 PIRSF PIRSF039101 3 497 1.4E-202 T 01-11-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 SUPERFAMILY SSF55681 156 495 1.89E-122 T 01-11-2018 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 8 496 2.4E-226 T 01-11-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 Gene3D G3DSA:2.40.50.140 9 149 9.6E-45 T 01-11-2018 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 15 497 46.223 T 01-11-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 SUPERFAMILY SSF50249 8 149 6.43E-43 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 494 5.8E-82 T 01-11-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 Gene3D G3DSA:3.30.930.10 150 494 1.9E-136 T 01-11-2018 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 2.6E-40 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 2.6E-40 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 2.6E-40 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 2.6E-40 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 PRINTS PR00982 Lysyl-tRNA synthetase signature 379 395 2.6E-40 T 01-11-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DOE78_00470 68183712e4afaf15b7d7a63b4d97da5b 497 Pfam PF01336 OB-fold nucleic acid binding domain 63 140 3.8E-15 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DOE78_14820 eb3500f900bc1e6001c5df5267077c14 173 SUPERFAMILY SSF88946 13 91 3.1E-19 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_14820 eb3500f900bc1e6001c5df5267077c14 173 Pfam PF04542 Sigma-70 region 2 16 81 1.9E-15 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_14820 eb3500f900bc1e6001c5df5267077c14 173 SUPERFAMILY SSF88659 100 167 6.76E-13 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_14820 eb3500f900bc1e6001c5df5267077c14 173 Pfam PF08281 Sigma-70, region 4 112 163 1.1E-11 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_14820 eb3500f900bc1e6001c5df5267077c14 173 Gene3D G3DSA:1.10.10.10 84 171 3.2E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14820 eb3500f900bc1e6001c5df5267077c14 173 Gene3D G3DSA:1.10.1740.10 2 83 4.9E-19 T 01-11-2018 DOE78_14820 eb3500f900bc1e6001c5df5267077c14 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 164 7.8E-26 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 SMART SM00304 211 263 2.4E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 517 1.6E-46 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 SMART SM00283 292 567 7.1E-86 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 5.6E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 5.6E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 417 5.6E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 Gene3D G3DSA:1.20.1480.50 169 267 5.6E-12 T 01-11-2018 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 Gene3D G3DSA:1.10.287.950 268 567 8.5E-71 T 01-11-2018 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 SUPERFAMILY SSF58104 231 567 1.18E-70 T 01-11-2018 DOE78_04900 e5b59152b29e11ae4f930f1d90f1872d 570 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 181 2.4E-30 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 494 2.3E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 SUPERFAMILY SSF55874 345 494 1.05E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 SMART SM00388 283 348 1.3E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 6.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 6.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 441 6.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 455 6.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 SUPERFAMILY SSF47384 269 344 1.79E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 Gene3D G3DSA:1.10.287.130 271 346 1.8E-16 T 01-11-2018 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 Gene3D G3DSA:3.30.450.20 72 172 4.2E-43 T 01-11-2018 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 Gene3D G3DSA:3.30.565.10 349 497 3.2E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 Gene3D G3DSA:3.30.450.20 45 224 4.2E-43 T 01-11-2018 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 344 1.7E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_07105 3f6c7969dcd77f0dddfd6f1f5a6b9c09 497 SMART SM00387 390 496 8.7E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 SUPERFAMILY SSF52343 95 258 7.99E-29 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 202 2.7E-4 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 Pfam PF00970 Oxidoreductase FAD-binding domain 7 98 6.2E-5 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 Gene3D G3DSA:2.10.240.10 216 259 1.5E-18 T 01-11-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 Gene3D G3DSA:3.40.50.80 103 215 2.4E-23 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 SUPERFAMILY SSF63380 3 100 3.58E-22 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 216 257 4.1E-17 T 01-11-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 259 37.849 T 01-11-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 PIRSF PIRSF006816 1 259 1.4E-69 T 01-11-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 DOE78_07860 0f7b0606e2a7b4e7223eeac90137f813 259 Gene3D G3DSA:2.40.30.10 2 98 5.9E-30 T 01-11-2018 DOE78_03440 3f8b0fdbd7f3a13e677e362b07203acc 326 TIGRFAM TIGR00277 HDIG: HDIG domain 129 202 1.7E-8 T 01-11-2018 IPR006675 HDIG domain DOE78_03440 3f8b0fdbd7f3a13e677e362b07203acc 326 SMART SM00471 124 244 7.9E-4 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_03440 3f8b0fdbd7f3a13e677e362b07203acc 326 SUPERFAMILY SSF109604 107 268 8.59E-19 T 01-11-2018 DOE78_03440 3f8b0fdbd7f3a13e677e362b07203acc 326 Gene3D G3DSA:1.10.3210.10 4 271 2.0E-43 T 01-11-2018 DOE78_03440 3f8b0fdbd7f3a13e677e362b07203acc 326 Pfam PF01966 HD domain 129 234 6.5E-11 T 01-11-2018 IPR006674 HD domain DOE78_21690 9749bccb5015b7cd90a81313b6fda7b0 301 Gene3D G3DSA:2.60.120.10 177 301 8.5E-42 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_21690 9749bccb5015b7cd90a81313b6fda7b0 301 Pfam PF07883 Cupin domain 202 277 1.6E-14 T 01-11-2018 IPR013096 Cupin 2, conserved barrel DOE78_21690 9749bccb5015b7cd90a81313b6fda7b0 301 SUPERFAMILY SSF47240 32 155 1.29E-7 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_21690 9749bccb5015b7cd90a81313b6fda7b0 301 SUPERFAMILY SSF51182 165 283 3.85E-24 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 SUPERFAMILY SSF69055 288 379 1.12E-29 T 01-11-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 SUPERFAMILY SSF51735 2 146 7.65E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 376 4.8E-162 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 142 225 8.3E-42 T 01-11-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 Gene3D G3DSA:3.40.50.720 1 146 1.0E-46 T 01-11-2018 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 379 46.429 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 128 2.6E-40 T 01-11-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 PIRSF PIRSF006205 1 380 7.7E-160 T 01-11-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 SUPERFAMILY SSF55347 122 260 1.08E-60 T 01-11-2018 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 Pfam PF13288 DXP reductoisomerase C-terminal domain 257 374 4.3E-42 T 01-11-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DOE78_08350 ef1624c6896207678641d33b3ca618dc 380 Gene3D G3DSA:1.10.1740.10 300 380 2.0E-27 T 01-11-2018 DOE78_24150 f29ce61b0c82472e184632164aeb8cfe 550 PIRSF PIRSF010386 6 550 5.7E-183 T 01-11-2018 IPR012166 Uncharacterised protein family RocB DOE78_24150 f29ce61b0c82472e184632164aeb8cfe 550 Gene3D G3DSA:3.40.630.10 7 228 2.2E-33 T 01-11-2018 DOE78_24150 f29ce61b0c82472e184632164aeb8cfe 550 Pfam PF01546 Peptidase family M20/M25/M40 127 474 1.3E-11 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_24150 f29ce61b0c82472e184632164aeb8cfe 550 SUPERFAMILY SSF53187 8 533 9.14E-31 T 01-11-2018 DOE78_17500 d7b69734a9b643aa487d1a325758eef6 379 Gene3D G3DSA:3.80.30.20 3 299 3.3E-106 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe DOE78_17500 d7b69734a9b643aa487d1a325758eef6 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 366 2.1E-130 T 01-11-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 DOE78_17500 d7b69734a9b643aa487d1a325758eef6 379 Pfam PF06969 HemN C-terminal domain 303 366 4.5E-14 T 01-11-2018 IPR010723 HemN, C-terminal DOE78_17500 d7b69734a9b643aa487d1a325758eef6 379 SMART SM00729 2 222 1.6E-63 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_17500 d7b69734a9b643aa487d1a325758eef6 379 SUPERFAMILY SSF102114 5 376 9.81E-121 T 01-11-2018 DOE78_17500 d7b69734a9b643aa487d1a325758eef6 379 Pfam PF04055 Radical SAM superfamily 7 176 4.3E-25 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_10315 7cdc291026f234aef7985f6cead57b7a 482 Pfam PF00367 phosphotransferase system, EIIB 8 41 7.2E-15 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_10315 7cdc291026f234aef7985f6cead57b7a 482 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 465 2.8E-197 T 01-11-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 DOE78_10315 7cdc291026f234aef7985f6cead57b7a 482 SUPERFAMILY SSF55604 7 82 7.06E-20 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_10315 7cdc291026f234aef7985f6cead57b7a 482 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_10315 7cdc291026f234aef7985f6cead57b7a 482 Gene3D G3DSA:3.30.1360.60 1 78 4.5E-26 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_10315 7cdc291026f234aef7985f6cead57b7a 482 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 4.4E-22 T 01-11-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DOE78_10315 7cdc291026f234aef7985f6cead57b7a 482 Pfam PF02378 Phosphotransferase system, EIIC 110 410 4.2E-52 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Gene3D G3DSA:3.30.450.20 222 338 1.0E-18 T 01-11-2018 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 119 173 1.5E-10 T 01-11-2018 IPR000014 PAS domain DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 348 8.9E-17 T 01-11-2018 IPR000014 PAS domain DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SUPERFAMILY SSF55785 229 335 5.06E-16 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 391 404 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Pfam PF00989 PAS fold 236 338 9.0E-14 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Pfam PF00989 PAS fold 120 214 4.5E-14 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 661 681 4.9E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 644 661 4.9E-9 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Gene3D G3DSA:3.30.450.20 122 221 3.5E-20 T 01-11-2018 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Gene3D G3DSA:1.10.8.60 539 619 2.7E-23 T 01-11-2018 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 581 590 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Gene3D G3DSA:3.40.50.300 354 538 1.8E-63 T 01-11-2018 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SUPERFAMILY SSF46689 581 680 8.96E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SMART SM00382 387 531 4.0E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SUPERFAMILY SSF52540 366 607 1.54E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Gene3D G3DSA:3.40.50.720 3 121 2.0E-5 T 01-11-2018 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Pfam PF00158 Sigma-54 interaction domain 367 535 3.1E-66 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Pfam PF02954 Bacterial regulatory protein, Fis family 638 678 9.2E-13 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SUPERFAMILY SSF55785 119 213 3.4E-17 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 454 469 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 Gene3D G3DSA:1.10.10.60 620 682 1.5E-15 T 01-11-2018 DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SUPERFAMILY SSF51735 4 101 5.73E-9 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SMART SM00091 116 182 3.3E-11 T 01-11-2018 IPR000014 PAS domain DOE78_16785 73c7660eae6234992d9fc962f20139bf 686 SMART SM00091 235 300 4.2E-8 T 01-11-2018 IPR000014 PAS domain DOE78_00110 9c1f4321ff23908a9ed0e07482f3449c 217 Pfam PF01712 Deoxynucleoside kinase 7 205 2.1E-49 T 01-11-2018 IPR031314 Deoxynucleoside kinase domain DOE78_00110 9c1f4321ff23908a9ed0e07482f3449c 217 SUPERFAMILY SSF52540 1 203 2.77E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00110 9c1f4321ff23908a9ed0e07482f3449c 217 PIRSF PIRSF000705 1 210 3.0E-56 T 01-11-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 DOE78_00110 9c1f4321ff23908a9ed0e07482f3449c 217 Gene3D G3DSA:3.40.50.300 5 208 8.6E-48 T 01-11-2018 DOE78_00735 de25a720da32e03c135da29d749c5745 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 01-11-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00735 de25a720da32e03c135da29d749c5745 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 21.11 T 01-11-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DOE78_00735 de25a720da32e03c135da29d749c5745 94 SUPERFAMILY SSF54189 1 89 7.91E-31 T 01-11-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00735 de25a720da32e03c135da29d749c5745 94 Gene3D G3DSA:3.30.70.330 1 94 9.8E-32 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE78_00735 de25a720da32e03c135da29d749c5745 94 Pfam PF00276 Ribosomal protein L23 5 87 3.3E-32 T 01-11-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DOE78_14830 f94902b7fcc23f144dfb86440a4b8209 299 SMART SM00382 26 203 1.7E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_14830 f94902b7fcc23f144dfb86440a4b8209 299 SUPERFAMILY SSF52540 2 225 1.46E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14830 f94902b7fcc23f144dfb86440a4b8209 299 Gene3D G3DSA:3.40.50.300 1 231 2.8E-47 T 01-11-2018 DOE78_14830 f94902b7fcc23f144dfb86440a4b8209 299 Pfam PF00005 ABC transporter 18 154 9.5E-23 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 PIRSF PIRSF500136 1 428 1.1E-144 T 01-11-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 297 3.8E-29 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 Gene3D G3DSA:3.40.50.720 2 201 2.5E-57 T 01-11-2018 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 SMART SM00984 321 416 1.2E-20 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 SUPERFAMILY SSF48179 206 297 4.25E-30 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 Gene3D G3DSA:3.40.50.720 205 430 1.6E-57 T 01-11-2018 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 10 412 4.2E-128 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 SUPERFAMILY SSF52413 313 415 1.96E-20 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 415 3.9E-16 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 SUPERFAMILY SSF51735 10 196 2.03E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 10 188 8.3E-41 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_09665 27b928e13c69acf6e57bb51bdedb8467 431 PIRSF PIRSF000124 10 426 2.8E-68 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 8.8E-13 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 353 375 8.8E-13 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 34 53 8.8E-13 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 411 433 8.8E-13 T 01-11-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 117 8.1E-20 T 01-11-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 613 4.6E-208 T 01-11-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 2.6E-60 T 01-11-2018 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 2.6E-60 T 01-11-2018 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 2.6E-60 T 01-11-2018 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 2.6E-60 T 01-11-2018 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 2.6E-60 T 01-11-2018 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 412 431 2.6E-60 T 01-11-2018 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 2.6E-60 T 01-11-2018 DOE78_23630 f9b2f5a452be4c62253820b0ecde1b81 622 Pfam PF00361 Proton-conducting membrane transporter 130 419 4.5E-89 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_06460 793023caa75150b98802da8401523134 226 SUPERFAMILY SSF51206 7 132 1.09E-25 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_06460 793023caa75150b98802da8401523134 226 SMART SM00100 1 118 2.3E-9 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_06460 793023caa75150b98802da8401523134 226 SMART SM00419 157 205 3.6E-13 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06460 793023caa75150b98802da8401523134 226 SUPERFAMILY SSF46785 136 222 9.4E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_06460 793023caa75150b98802da8401523134 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 163 179 1.4E-5 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06460 793023caa75150b98802da8401523134 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 179 194 1.4E-5 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06460 793023caa75150b98802da8401523134 226 Pfam PF13545 Crp-like helix-turn-helix domain 139 211 2.0E-14 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06460 793023caa75150b98802da8401523134 226 Gene3D G3DSA:2.60.120.10 3 133 3.7E-26 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_06460 793023caa75150b98802da8401523134 226 Pfam PF00027 Cyclic nucleotide-binding domain 18 105 5.0E-15 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_06460 793023caa75150b98802da8401523134 226 Gene3D G3DSA:1.10.10.10 134 220 7.1E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09270 d2b2d06fb86e6d3f78e165136a60bf7c 296 Gene3D G3DSA:1.10.3720.10 49 294 9.7E-73 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09270 d2b2d06fb86e6d3f78e165136a60bf7c 296 SUPERFAMILY SSF161098 53 284 5.36E-59 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09270 d2b2d06fb86e6d3f78e165136a60bf7c 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 282 3.3E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 SUPERFAMILY SSF158472 180 226 1.83E-5 T 01-11-2018 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 448 8.9E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 300 4.6E-16 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 SMART SM00388 234 301 1.0E-17 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 2.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 2.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 2.4E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 SMART SM00387 342 452 1.4E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 SUPERFAMILY SSF55874 290 448 8.12E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 SUPERFAMILY SSF47384 218 299 8.63E-18 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 Gene3D G3DSA:3.30.565.10 304 450 6.3E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 Gene3D G3DSA:1.10.287.130 183 302 8.8E-26 T 01-11-2018 DOE78_13105 74fe2b30f5f94d5bec681b0de06e0be7 454 Pfam PF00672 HAMP domain 181 228 1.2E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 SUPERFAMILY SSF53822 62 339 1.01E-79 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 SMART SM00354 2 72 3.6E-33 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 6.8E-21 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 Pfam PF13377 Periplasmic binding protein-like domain 175 336 2.2E-36 T 01-11-2018 DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 Gene3D G3DSA:1.10.260.40 1 60 9.2E-25 T 01-11-2018 DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 SUPERFAMILY SSF47413 2 60 9.72E-19 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 Gene3D G3DSA:3.40.50.2300 76 328 1.0E-83 T 01-11-2018 DOE78_06285 4c5caf0cef7d6c2cc754420595c95dd5 353 Gene3D G3DSA:3.40.50.2300 167 330 1.0E-83 T 01-11-2018 DOE78_15675 6845e48081cb62263c92325d8d294eb2 260 SUPERFAMILY SSF52540 9 245 2.38E-68 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15675 6845e48081cb62263c92325d8d294eb2 260 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_15675 6845e48081cb62263c92325d8d294eb2 260 Gene3D G3DSA:3.40.50.300 2 225 4.1E-61 T 01-11-2018 DOE78_15675 6845e48081cb62263c92325d8d294eb2 260 SMART SM00382 34 234 1.7E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_15675 6845e48081cb62263c92325d8d294eb2 260 Pfam PF00005 ABC transporter 25 168 5.0E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 SMART SM00387 264 373 9.6E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05720 7244281630a7863412de8aca9ec4b368 379 SUPERFAMILY SSF47384 154 219 9.61E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 370 6.1E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05720 7244281630a7863412de8aca9ec4b368 379 Gene3D G3DSA:1.10.490.70 1 149 3.4E-42 T 01-11-2018 IPR038284 Histidine kinase, N-terminal domain superfamily DOE78_05720 7244281630a7863412de8aca9ec4b368 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 2.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 2.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 2.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 333 2.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 Gene3D G3DSA:3.30.565.10 222 375 5.6E-33 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05720 7244281630a7863412de8aca9ec4b368 379 Gene3D G3DSA:1.10.287.130 150 220 4.4E-11 T 01-11-2018 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 SMART SM00388 159 221 3.6E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 Pfam PF00512 His Kinase A (phospho-acceptor) domain 160 219 2.3E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05720 7244281630a7863412de8aca9ec4b368 379 SUPERFAMILY SSF55874 212 371 6.68E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05720 7244281630a7863412de8aca9ec4b368 379 Pfam PF09385 Histidine kinase N terminal 7 136 7.3E-33 T 01-11-2018 IPR018984 Histidine kinase, N-terminal DOE78_21405 2cd1ff142594694d4ba146b749eb204e 442 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 84 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_21405 2cd1ff142594694d4ba146b749eb204e 442 SUPERFAMILY SSF103473 7 392 2.88E-45 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_21405 2cd1ff142594694d4ba146b749eb204e 442 Pfam PF07690 Major Facilitator Superfamily 16 296 9.9E-20 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_21405 2cd1ff142594694d4ba146b749eb204e 442 Gene3D G3DSA:1.20.1250.20 8 391 4.6E-39 T 01-11-2018 DOE78_12375 ce71b911e049148821c830cd9d10b254 364 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 4 362 2.9E-66 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_12375 ce71b911e049148821c830cd9d10b254 364 Pfam PF03845 Spore germination protein 5 317 2.7E-64 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 01-11-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.3E-21 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 Gene3D G3DSA:1.20.5.1150 16 56 4.9E-18 T 01-11-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 Pfam PF01165 Ribosomal protein S21 5 56 2.0E-21 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.7E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.7E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.7E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.7E-15 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.182 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17450 fe2bf8a00d3493079c3840335d498ebe 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 3.0E-8 T 01-11-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 239 30.881 T 01-11-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 Pfam PF00035 Double-stranded RNA binding motif 177 241 2.9E-17 T 01-11-2018 IPR014720 Double-stranded RNA-binding domain DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 SUPERFAMILY SSF69065 15 177 8.89E-51 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 ProSitePatterns PS00517 Ribonuclease III family signature. 59 67 - T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 Pfam PF14622 Ribonuclease-III-like 33 163 9.7E-37 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 SMART SM00358 176 243 4.9E-22 T 01-11-2018 IPR014720 Double-stranded RNA-binding domain DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 23 242 4.2E-79 T 01-11-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 SUPERFAMILY SSF54768 132 242 1.34E-24 T 01-11-2018 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 SMART SM00535 35 170 1.5E-58 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 Gene3D G3DSA:1.10.1520.10 18 167 5.4E-46 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DOE78_08025 4fc9e913046bc946ab4be1fe10892bc9 259 Gene3D G3DSA:3.30.160.20 175 242 3.0E-23 T 01-11-2018 DOE78_11995 8f536dd43cedb02a6ab27a6d53926072 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 1.2E-28 T 01-11-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_11995 8f536dd43cedb02a6ab27a6d53926072 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 01-11-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_11995 8f536dd43cedb02a6ab27a6d53926072 89 Gene3D G3DSA:4.10.830.10 28 89 2.7E-26 T 01-11-2018 DOE78_11995 8f536dd43cedb02a6ab27a6d53926072 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 26.281 T 01-11-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DOE78_11995 8f536dd43cedb02a6ab27a6d53926072 89 SUPERFAMILY SSF57716 2 89 2.21E-33 T 01-11-2018 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 Gene3D G3DSA:1.10.286.20 193 239 5.0E-41 T 01-11-2018 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 SUPERFAMILY SSF54713 151 293 3.92E-50 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 SUPERFAMILY SSF46934 1 55 9.84E-20 T 01-11-2018 IPR009060 UBA-like superfamily GO:0005515 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 79.843 T 01-11-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 01-11-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 Gene3D G3DSA:1.10.8.10 1 55 1.8E-26 T 01-11-2018 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 01-11-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 Gene3D G3DSA:3.30.479.20 56 146 4.4E-24 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 292 1.8E-112 T 01-11-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 Gene3D G3DSA:3.30.479.20 155 273 5.0E-41 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 SUPERFAMILY SSF54713 55 142 7.85E-22 T 01-11-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DOE78_08325 bce61e870716053c7a58bd8e50754d7c 294 Pfam PF00889 Elongation factor TS 70 274 3.6E-75 T 01-11-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 95 115 5.6E-8 T 01-11-2018 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 83 95 5.6E-8 T 01-11-2018 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 217 234 5.6E-8 T 01-11-2018 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 SUPERFAMILY SSF81464 16 114 1.28E-22 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 Gene3D G3DSA:1.10.287.90 27 114 8.7E-24 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 33 244 2.1E-52 T 01-11-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 43 106 1.0E-11 T 01-11-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 154 234 6.7E-13 T 01-11-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 Pfam PF00034 Cytochrome c 261 353 1.5E-11 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 174 228 - T 01-11-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 SUPERFAMILY SSF46626 256 353 7.2E-19 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 Gene3D G3DSA:2.60.40.2600 126 356 1.4E-67 T 01-11-2018 DOE78_07480 1fad64d12ba5a41a182feb6d7f8a56fb 356 SUPERFAMILY SSF49503 125 282 2.53E-40 T 01-11-2018 IPR008972 Cupredoxin DOE78_22905 6b4d39c1a9376dcbe31e63160230a74e 142 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 26.327 T 01-11-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DOE78_22905 6b4d39c1a9376dcbe31e63160230a74e 142 SUPERFAMILY SSF141457 1 140 1.83E-49 T 01-11-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DOE78_22905 6b4d39c1a9376dcbe31e63160230a74e 142 Pfam PF02623 FliW protein 19 138 2.1E-41 T 01-11-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DOE78_22905 6b4d39c1a9376dcbe31e63160230a74e 142 Gene3D G3DSA:2.30.290.10 1 142 1.2E-53 T 01-11-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DOE78_22440 64701e208fdb236f2e9266309ba086ec 184 Pfam PF14595 Thioredoxin 12 135 5.4E-35 T 01-11-2018 DOE78_22440 64701e208fdb236f2e9266309ba086ec 184 Gene3D G3DSA:3.40.30.10 1 151 6.8E-17 T 01-11-2018 DOE78_22440 64701e208fdb236f2e9266309ba086ec 184 SUPERFAMILY SSF52833 46 136 1.42E-7 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_12795 ff4e96b0ef1a1e69e201570126a06944 300 SUPERFAMILY SSF53800 1 249 3.27E-54 T 01-11-2018 DOE78_12795 ff4e96b0ef1a1e69e201570126a06944 300 Pfam PF01903 CbiX 9 114 2.1E-25 T 01-11-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DOE78_12795 ff4e96b0ef1a1e69e201570126a06944 300 Pfam PF01903 CbiX 138 241 7.1E-23 T 01-11-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DOE78_12795 ff4e96b0ef1a1e69e201570126a06944 300 Gene3D G3DSA:3.40.50.1400 128 251 3.1E-22 T 01-11-2018 DOE78_12795 ff4e96b0ef1a1e69e201570126a06944 300 Gene3D G3DSA:3.40.50.1400 1 123 5.3E-27 T 01-11-2018 DOE78_17685 3323fcc36f33c3c06e9a6882c2e56eef 138 Pfam PF03652 Holliday junction resolvase 1 136 2.0E-45 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DOE78_17685 3323fcc36f33c3c06e9a6882c2e56eef 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 5.7E-50 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DOE78_17685 3323fcc36f33c3c06e9a6882c2e56eef 138 SUPERFAMILY SSF53098 1 137 1.41E-45 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_17685 3323fcc36f33c3c06e9a6882c2e56eef 138 SMART SM00732 1 103 1.3E-39 T 01-11-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DOE78_17685 3323fcc36f33c3c06e9a6882c2e56eef 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 28.361 T 01-11-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DOE78_17685 3323fcc36f33c3c06e9a6882c2e56eef 138 Gene3D G3DSA:3.30.420.140 1 138 5.4E-52 T 01-11-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DOE78_23975 4f9688ddd8697bdd51a0e394b3717213 248 SUPERFAMILY SSF54909 2 246 8.85E-96 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_23975 4f9688ddd8697bdd51a0e394b3717213 248 Gene3D G3DSA:3.30.70.1100 137 247 6.5E-49 T 01-11-2018 DOE78_23975 4f9688ddd8697bdd51a0e394b3717213 248 Pfam PF06778 Chlorite dismutase 33 235 5.3E-78 T 01-11-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase DOE78_23975 4f9688ddd8697bdd51a0e394b3717213 248 Gene3D G3DSA:3.30.70.1030 1 136 6.7E-55 T 01-11-2018 DOE78_23975 4f9688ddd8697bdd51a0e394b3717213 248 Hamap MF_01442 Putative heme-dependent peroxidase . 1 247 57.068 T 01-11-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family DOE78_17210 9e81c076844322afe9da4832af7ebaef 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 21 291 7.2E-78 T 01-11-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DOE78_17210 9e81c076844322afe9da4832af7ebaef 294 Gene3D G3DSA:1.10.3720.10 68 293 1.1E-33 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_17210 9e81c076844322afe9da4832af7ebaef 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 289 5.2E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_17210 9e81c076844322afe9da4832af7ebaef 294 SUPERFAMILY SSF161098 28 280 3.55E-37 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_01030 0c44439008658d58ee830ae620de1500 600 Gene3D G3DSA:3.60.20.10 2 240 1.7E-72 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_01030 0c44439008658d58ee830ae620de1500 600 Pfam PF13522 Glutamine amidotransferase domain 64 191 6.3E-21 T 01-11-2018 DOE78_01030 0c44439008658d58ee830ae620de1500 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 1.3E-227 T 01-11-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DOE78_01030 0c44439008658d58ee830ae620de1500 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.763 T 01-11-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DOE78_01030 0c44439008658d58ee830ae620de1500 600 Gene3D G3DSA:3.40.50.10490 243 443 1.2E-65 T 01-11-2018 DOE78_01030 0c44439008658d58ee830ae620de1500 600 Gene3D G3DSA:3.40.50.10490 444 600 1.2E-60 T 01-11-2018 DOE78_01030 0c44439008658d58ee830ae620de1500 600 SUPERFAMILY SSF56235 2 234 1.8E-66 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_01030 0c44439008658d58ee830ae620de1500 600 SUPERFAMILY SSF53697 244 600 4.36E-95 T 01-11-2018 DOE78_01030 0c44439008658d58ee830ae620de1500 600 Pfam PF01380 SIS domain 457 582 5.4E-17 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_01030 0c44439008658d58ee830ae620de1500 600 Pfam PF01380 SIS domain 289 412 2.1E-32 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 Gene3D G3DSA:3.40.50.620 4 373 3.0E-143 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 Gene3D G3DSA:2.20.28.20 137 170 3.0E-143 T 01-11-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 SUPERFAMILY SSF52374 4 378 2.56E-90 T 01-11-2018 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 Pfam PF08264 Anticodon-binding domain of tRNA 410 494 3.3E-9 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 Hamap MF_00098 Methionine--tRNA ligase [metG]. 1 533 35.753 T 01-11-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 522 4.8E-147 T 01-11-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 Gene3D G3DSA:1.10.730.10 374 524 2.5E-34 T 01-11-2018 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 SUPERFAMILY SSF57770 137 170 1.31E-8 T 01-11-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 SUPERFAMILY SSF47323 383 530 1.05E-31 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 2.7E-19 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 PRINTS PR01041 Methionyl-tRNA synthetase signature 378 389 2.7E-19 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 PRINTS PR01041 Methionyl-tRNA synthetase signature 37 51 2.7E-19 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 PRINTS PR01041 Methionyl-tRNA synthetase signature 285 300 2.7E-19 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 PRINTS PR01041 Methionyl-tRNA synthetase signature 5 18 2.7E-19 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 PRINTS PR01041 Methionyl-tRNA synthetase signature 85 96 2.7E-19 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_01140 7e5534b10691dc623e7cd8d6f42a4358 539 Pfam PF09334 tRNA synthetases class I (M) 4 391 6.3E-133 T 01-11-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 TIGRFAM TIGR03333 salvage_mtnX: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase 7 217 1.2E-99 T 01-11-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 Gene3D G3DSA:3.40.50.1000 7 210 6.4E-68 T 01-11-2018 IPR023214 HAD superfamily DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 178 2.5E-35 T 01-11-2018 DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 Hamap MF_01680 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [mtnX]. 3 216 47.397 T 01-11-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 Gene3D G3DSA:3.90.1470.20 16 135 6.4E-68 T 01-11-2018 DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 186 4.0E-50 T 01-11-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 177 2.4E-20 T 01-11-2018 DOE78_07030 85c3332bbb5260e2b3b3f7cb38172480 220 SUPERFAMILY SSF56784 1 214 4.8E-52 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_05895 873d836d8f8eafac855b9379f18f3b27 111 Gene3D G3DSA:1.10.3750.10 2 111 1.3E-37 T 01-11-2018 IPR035945 YhaI-like superfamily DOE78_05895 873d836d8f8eafac855b9379f18f3b27 111 SUPERFAMILY SSF109915 5 109 2.48E-28 T 01-11-2018 IPR035945 YhaI-like superfamily DOE78_05895 873d836d8f8eafac855b9379f18f3b27 111 Pfam PF08963 Protein of unknown function (DUF1878) 5 110 7.1E-37 T 01-11-2018 IPR015058 Protein of unknown function DUF1878 DOE78_05895 873d836d8f8eafac855b9379f18f3b27 111 ProDom PD073069 YHAI 3D-STRUCTURE 12 103 2.0E-15 T 01-11-2018 IPR015058 Protein of unknown function DUF1878 DOE78_10770 1c49b3c40c984204abdd6ea71c359718 319 Pfam PF12706 Beta-lactamase superfamily domain 73 266 4.6E-44 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_10770 1c49b3c40c984204abdd6ea71c359718 319 SUPERFAMILY SSF56281 53 301 4.46E-38 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_10770 1c49b3c40c984204abdd6ea71c359718 319 PIRSF PIRSF038896 1 309 3.9E-90 T 01-11-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 DOE78_10770 1c49b3c40c984204abdd6ea71c359718 319 Gene3D G3DSA:3.60.15.10 39 310 1.3E-81 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_16845 cc1995369b8dbc9496b130af515566b2 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site DOE78_16845 cc1995369b8dbc9496b130af515566b2 294 Pfam PF00348 Polyprenyl synthetase 30 266 1.4E-60 T 01-11-2018 IPR000092 Polyprenyl synthetase GO:0008299 DOE78_16845 cc1995369b8dbc9496b130af515566b2 294 SUPERFAMILY SSF48576 5 276 6.72E-88 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_16845 cc1995369b8dbc9496b130af515566b2 294 Gene3D G3DSA:1.10.600.10 2 294 7.3E-108 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_16845 cc1995369b8dbc9496b130af515566b2 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 Pfam PF07694 5TMR of 5TMR-LYT 30 183 1.0E-10 T 01-11-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 3.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 3.0E-11 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 9.0E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 Gene3D G3DSA:3.30.565.10 276 423 3.2E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 SUPERFAMILY SSF55874 277 422 5.37E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 273 2.3E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 SMART SM00388 212 277 1.4E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 Gene3D G3DSA:1.10.287.130 196 275 3.9E-15 T 01-11-2018 DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 SMART SM00387 318 425 2.2E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13925 0f3a8cfa7d6a4e8e77ad7a838643dca9 425 SUPERFAMILY SSF47384 205 275 4.71E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_12805 e8a8a2ac8497c934f4022b09e09463c7 215 Gene3D G3DSA:3.40.50.10230 5 215 8.8E-81 T 01-11-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DOE78_12805 e8a8a2ac8497c934f4022b09e09463c7 215 SUPERFAMILY SSF63965 10 211 3.79E-70 T 01-11-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DOE78_12805 e8a8a2ac8497c934f4022b09e09463c7 215 Pfam PF02570 Precorrin-8X methylmutase 16 208 3.2E-76 T 01-11-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 DOE78_01270 f74b75a380b91ce6a494d227c96edad6 362 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 22 249 1.5E-73 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DOE78_01270 f74b75a380b91ce6a494d227c96edad6 362 SUPERFAMILY SSF56601 6 266 4.34E-71 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_01270 f74b75a380b91ce6a494d227c96edad6 362 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 103 120 1.9E-17 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_01270 f74b75a380b91ce6a494d227c96edad6 362 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 143 1.9E-17 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_01270 f74b75a380b91ce6a494d227c96edad6 362 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 1.9E-17 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_01270 f74b75a380b91ce6a494d227c96edad6 362 Gene3D G3DSA:3.40.710.10 12 283 8.9E-95 T 01-11-2018 DOE78_06675 bfd2e8d27cb4a2f33fc755fcf76abfcc 193 Gene3D G3DSA:2.40.320.10 1 191 4.3E-52 T 01-11-2018 DOE78_06675 bfd2e8d27cb4a2f33fc755fcf76abfcc 193 SMART SM01118 4 192 1.9E-18 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DOE78_06675 bfd2e8d27cb4a2f33fc755fcf76abfcc 193 SUPERFAMILY SSF55154 4 189 1.14E-30 T 01-11-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DOE78_06675 bfd2e8d27cb4a2f33fc755fcf76abfcc 193 Pfam PF01928 CYTH domain 5 186 1.8E-27 T 01-11-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DOE78_06675 bfd2e8d27cb4a2f33fc755fcf76abfcc 193 PIRSF PIRSF012526 1 193 2.7E-68 T 01-11-2018 IPR009195 Uncharacterised protein family YjbK DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 219 273 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 468 7.6E-92 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 Gene3D G3DSA:1.20.210.10 9 549 3.2E-129 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 SUPERFAMILY SSF81442 14 543 7.06E-110 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 238 3.6E-12 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 PRINTS PR01165 Cytochrome c oxidase subunit I signature 119 131 3.6E-12 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 3.6E-12 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 PRINTS PR01165 Cytochrome c oxidase subunit I signature 419 440 3.6E-12 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15800 bb8049b5d8def24afc231cce2bf93e33 549 PRINTS PR01165 Cytochrome c oxidase subunit I signature 55 78 3.6E-12 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_23195 873bce26c5bca45054592198b0cbd037 250 Pfam PF01695 IstB-like ATP binding protein 56 231 3.2E-55 T 01-11-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 DOE78_23195 873bce26c5bca45054592198b0cbd037 250 SUPERFAMILY SSF52540 67 239 1.16E-24 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23195 873bce26c5bca45054592198b0cbd037 250 PIRSF PIRSF003073 1 248 9.3E-94 T 01-11-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein DOE78_23195 873bce26c5bca45054592198b0cbd037 250 Gene3D G3DSA:3.40.50.300 64 247 1.4E-48 T 01-11-2018 DOE78_23195 873bce26c5bca45054592198b0cbd037 250 SMART SM00382 100 235 4.0E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 SUPERFAMILY SSF54862 335 411 7.33E-12 T 01-11-2018 DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 SUPERFAMILY SSF51395 1 318 1.67E-69 T 01-11-2018 DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 Pfam PF14697 4Fe-4S dicluster domain 335 397 2.1E-22 T 01-11-2018 DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 317 1.3E-57 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 Pfam PF01180 Dihydroorotate dehydrogenase 83 302 1.0E-30 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 Gene3D G3DSA:3.30.70.20 306 413 1.7E-21 T 01-11-2018 DOE78_13235 48d371cf665974d6c6aec10a67b67494 428 Gene3D G3DSA:3.20.20.70 4 305 3.3E-102 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 Pfam PF00672 HAMP domain 191 242 2.4E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 SUPERFAMILY SSF58104 220 549 5.36E-60 T 01-11-2018 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 Gene3D G3DSA:1.10.287.950 190 551 3.8E-57 T 01-11-2018 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 SMART SM00304 191 246 9.6E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 SMART SM00283 275 536 9.1E-43 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 504 3.5E-31 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 400 2.2E-17 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 2.2E-17 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_22815 09ac307b0591dd7e2dec25e739bc491f 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 2.2E-17 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_12160 f653dea3d8503f33114f7345a0b6aaa5 82 SUPERFAMILY SSF55008 2 68 1.02E-8 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DOE78_12160 f653dea3d8503f33114f7345a0b6aaa5 82 Gene3D G3DSA:3.30.70.100 1 70 4.2E-8 T 01-11-2018 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 SMART SM00382 602 751 6.8E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_06505 f0e986071c613744240cb40aadacdf67 861 SMART SM00382 201 347 4.7E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Gene3D G3DSA:1.10.1780.10 1 151 1.6E-23 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Gene3D G3DSA:3.40.50.300 346 549 2.2E-71 T 01-11-2018 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Gene3D G3DSA:1.10.8.60 769 860 4.3E-27 T 01-11-2018 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 5.5E-26 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_06505 f0e986071c613744240cb40aadacdf67 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 01-11-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 713 727 6.1E-43 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 606 624 6.1E-43 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 680 698 6.1E-43 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 6.1E-43 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 636 654 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 340 1.2E-13 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 SUPERFAMILY SSF81923 5 159 2.06E-31 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Gene3D G3DSA:3.40.50.300 555 768 2.6E-88 T 01-11-2018 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 SUPERFAMILY SSF52540 551 855 1.12E-84 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 763 1.9E-57 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 147 5.1E-5 T 01-11-2018 IPR004176 Clp, N-terminal DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.5E-8 T 01-11-2018 IPR004176 Clp, N-terminal DOE78_06505 f0e986071c613744240cb40aadacdf67 861 SMART SM01086 769 858 6.4E-35 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_06505 f0e986071c613744240cb40aadacdf67 861 Gene3D G3DSA:3.40.50.300 152 345 5.4E-74 T 01-11-2018 DOE78_06505 f0e986071c613744240cb40aadacdf67 861 SUPERFAMILY SSF52540 160 550 5.0E-99 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08370 351bca195fa93a93db77fa31b8962464 156 Gene3D G3DSA:2.30.30.180 87 153 2.2E-25 T 01-11-2018 DOE78_08370 351bca195fa93a93db77fa31b8962464 156 Pfam PF02576 RimP N-terminal domain 11 83 7.7E-29 T 01-11-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DOE78_08370 351bca195fa93a93db77fa31b8962464 156 SUPERFAMILY SSF75420 2 83 1.57E-27 T 01-11-2018 IPR035956 RimP, N-terminal domain superfamily DOE78_08370 351bca195fa93a93db77fa31b8962464 156 SUPERFAMILY SSF74942 84 155 1.22E-21 T 01-11-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DOE78_08370 351bca195fa93a93db77fa31b8962464 156 Pfam PF17384 RimP C-terminal SH3 domain 86 155 2.7E-20 T 01-11-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DOE78_08370 351bca195fa93a93db77fa31b8962464 156 Gene3D G3DSA:3.30.300.70 1 80 1.6E-30 T 01-11-2018 IPR035956 RimP, N-terminal domain superfamily DOE78_08370 351bca195fa93a93db77fa31b8962464 156 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 155 25.213 T 01-11-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DOE78_03320 ea7a060c921730aef9f9e4ecaf07f21e 225 SMART SM00862 145 221 2.3E-22 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_03320 ea7a060c921730aef9f9e4ecaf07f21e 225 Gene3D G3DSA:1.10.10.10 120 225 2.7E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_03320 ea7a060c921730aef9f9e4ecaf07f21e 225 SUPERFAMILY SSF52172 1 173 2.2E-40 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_03320 ea7a060c921730aef9f9e4ecaf07f21e 225 Gene3D G3DSA:3.40.50.2300 1 119 7.7E-37 T 01-11-2018 DOE78_03320 ea7a060c921730aef9f9e4ecaf07f21e 225 Pfam PF00072 Response regulator receiver domain 4 112 1.0E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03320 ea7a060c921730aef9f9e4ecaf07f21e 225 SMART SM00448 2 112 1.3E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03320 ea7a060c921730aef9f9e4ecaf07f21e 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 2.6E-23 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 Gene3D G3DSA:1.10.1660.10 2 76 6.0E-25 T 01-11-2018 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 Pfam PF02607 B12 binding domain 99 168 1.5E-10 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 Gene3D G3DSA:1.10.1240.10 97 173 1.5E-21 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 SMART SM00422 8 77 2.1E-15 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 SUPERFAMILY SSF46955 8 81 4.21E-17 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 Gene3D G3DSA:3.40.50.280 177 293 1.7E-17 T 01-11-2018 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 Pfam PF02310 B12 binding domain 182 293 6.7E-15 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 Pfam PF13411 MerR HTH family regulatory protein 8 76 1.1E-16 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_16225 bbfb264214a08b340b4b6fe58126559f 302 SUPERFAMILY SSF52242 181 279 2.51E-14 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 Hamap MF_01491 Ribonuclease J [rnj]. 1 555 45.616 T 01-11-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 PIRSF PIRSF004803 1 555 1.6E-232 T 01-11-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 7 553 5.7E-194 T 01-11-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 SMART SM00849 18 212 6.2E-31 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 SUPERFAMILY SSF56281 7 423 2.99E-95 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 Pfam PF00753 Metallo-beta-lactamase superfamily 18 164 1.3E-16 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 363 404 4.9E-9 T 01-11-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 Gene3D G3DSA:3.40.50.10710 205 355 2.8E-179 T 01-11-2018 DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 Gene3D G3DSA:3.10.20.580 449 555 7.3E-37 T 01-11-2018 DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 01-11-2018 IPR001587 Ribonuclease J, conserved site DOE78_09465 ecdd8d934e7941d979cb95b156a3a91e 555 Gene3D G3DSA:3.60.15.10 9 442 2.8E-179 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_06690 6723c6024e515bfa6f610b774faa2487 265 Hamap MF_00361 NAD kinase [nadK]. 1 263 24.113 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DOE78_06690 6723c6024e515bfa6f610b774faa2487 265 SUPERFAMILY SSF111331 17 261 3.66E-63 T 01-11-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE78_06690 6723c6024e515bfa6f610b774faa2487 265 Gene3D G3DSA:3.40.50.10330 16 262 1.9E-97 T 01-11-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DOE78_06690 6723c6024e515bfa6f610b774faa2487 265 Gene3D G3DSA:2.60.200.30 102 240 1.9E-97 T 01-11-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DOE78_06690 6723c6024e515bfa6f610b774faa2487 265 Pfam PF01513 ATP-NAD kinase 34 185 2.5E-21 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DOE78_13590 fd262cf24bcdfc01873f3bbac01985c5 413 Gene3D G3DSA:3.30.420.40 106 399 1.1E-82 T 01-11-2018 DOE78_13590 fd262cf24bcdfc01873f3bbac01985c5 413 ProSitePatterns PS01125 ROK family signature. 230 257 - T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_13590 fd262cf24bcdfc01873f3bbac01985c5 413 SUPERFAMILY SSF46785 26 91 8.4E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_13590 fd262cf24bcdfc01873f3bbac01985c5 413 Pfam PF00480 ROK family 104 402 1.5E-61 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_13590 fd262cf24bcdfc01873f3bbac01985c5 413 Gene3D G3DSA:1.10.10.10 29 94 6.5E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13590 fd262cf24bcdfc01873f3bbac01985c5 413 SUPERFAMILY SSF53067 99 406 1.49E-53 T 01-11-2018 DOE78_13590 fd262cf24bcdfc01873f3bbac01985c5 413 Gene3D G3DSA:3.30.420.40 220 389 1.1E-82 T 01-11-2018 DOE78_15655 83a5331a51a77876ef30a0043c3ac708 119 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 119 2.4E-39 T 01-11-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DOE78_15655 83a5331a51a77876ef30a0043c3ac708 119 ProSitePatterns PS00769 Transthyretin signature 2. 102 114 - T 01-11-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DOE78_15655 83a5331a51a77876ef30a0043c3ac708 119 SUPERFAMILY SSF49472 1 119 1.96E-38 T 01-11-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DOE78_15655 83a5331a51a77876ef30a0043c3ac708 119 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 01-11-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DOE78_15655 83a5331a51a77876ef30a0043c3ac708 119 Gene3D G3DSA:2.60.40.180 1 119 1.3E-38 T 01-11-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DOE78_15655 83a5331a51a77876ef30a0043c3ac708 119 Pfam PF00576 HIUase/Transthyretin family 4 118 1.9E-35 T 01-11-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 SUPERFAMILY SSF51445 52 380 1.2E-85 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 SUPERFAMILY SSF49785 381 556 1.53E-56 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 63 327 7.1E-63 T 01-11-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 SUPERFAMILY SSF49785 566 752 2.55E-64 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 Gene3D G3DSA:3.20.20.80 37 382 8.5E-104 T 01-11-2018 DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 Gene3D G3DSA:2.60.120.260 556 751 3.3E-69 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 Pfam PF03424 Carbohydrate binding domain (family 17/28) 568 751 3.7E-24 T 01-11-2018 IPR005086 Carbohydrate binding module family 17/28 GO:0008810|GO:0030245 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 Pfam PF03424 Carbohydrate binding domain (family 17/28) 353 556 2.2E-90 T 01-11-2018 IPR005086 Carbohydrate binding module family 17/28 GO:0008810|GO:0030245 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 Gene3D G3DSA:2.60.120.260 383 555 2.5E-70 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_21445 8f60b8ac27b84c47ed1d21fb2bf9dfc4 773 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 177 186 - T 01-11-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 DOE78_06060 326e5b6dc6d10d0e68dead45fdede169 329 SUPERFAMILY SSF55681 2 242 6.96E-81 T 01-11-2018 DOE78_06060 326e5b6dc6d10d0e68dead45fdede169 329 Gene3D G3DSA:3.30.390.50 243 329 1.6E-32 T 01-11-2018 DOE78_06060 326e5b6dc6d10d0e68dead45fdede169 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 328 1.9E-31 T 01-11-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 DOE78_06060 326e5b6dc6d10d0e68dead45fdede169 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 153 5.1E-11 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DOE78_06060 326e5b6dc6d10d0e68dead45fdede169 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 323 2.9E-133 T 01-11-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 DOE78_06060 326e5b6dc6d10d0e68dead45fdede169 329 Gene3D G3DSA:3.30.930.10 3 242 3.5E-81 T 01-11-2018 DOE78_06060 326e5b6dc6d10d0e68dead45fdede169 329 SUPERFAMILY SSF82649 243 329 7.32E-29 T 01-11-2018 DOE78_04485 8a080de48c1eb3a89b75c70013a6e6c7 151 PRINTS PR00502 NUDIX hydrolase family signature 44 58 2.1E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_04485 8a080de48c1eb3a89b75c70013a6e6c7 151 PRINTS PR00502 NUDIX hydrolase family signature 58 73 2.1E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_04485 8a080de48c1eb3a89b75c70013a6e6c7 151 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_04485 8a080de48c1eb3a89b75c70013a6e6c7 151 Gene3D G3DSA:3.90.79.10 1 147 3.5E-35 T 01-11-2018 DOE78_04485 8a080de48c1eb3a89b75c70013a6e6c7 151 Pfam PF00293 NUDIX domain 23 140 9.4E-20 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_04485 8a080de48c1eb3a89b75c70013a6e6c7 151 SUPERFAMILY SSF55811 15 145 1.49E-29 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 Gene3D G3DSA:3.20.20.80 1 109 1.1E-50 T 01-11-2018 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 SUPERFAMILY SSF51445 4 476 3.69E-156 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 Gene3D G3DSA:3.90.400.10 110 170 4.9E-33 T 01-11-2018 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 Gene3D G3DSA:2.60.40.1180 480 564 2.9E-19 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 PRINTS PR00110 Alpha-amylase signature 92 103 2.9E-6 T 01-11-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 PRINTS PR00110 Alpha-amylase signature 193 204 2.9E-6 T 01-11-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 PRINTS PR00110 Alpha-amylase signature 317 329 2.9E-6 T 01-11-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 SUPERFAMILY SSF51011 479 563 1.13E-15 T 01-11-2018 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 Pfam PF00128 Alpha amylase, catalytic domain 28 374 4.2E-118 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 SMART SM00642 13 416 2.0E-161 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_23425 535d990a57399ec4ec7070b58f98175f 564 Gene3D G3DSA:3.20.20.80 171 479 1.2E-120 T 01-11-2018 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 SUPERFAMILY SSF53649 23 458 7.41E-128 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 PRINTS PR00113 Alkaline phosphatase signature 45 65 2.2E-43 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 PRINTS PR00113 Alkaline phosphatase signature 187 197 2.2E-43 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 PRINTS PR00113 Alkaline phosphatase signature 137 157 2.2E-43 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 PRINTS PR00113 Alkaline phosphatase signature 100 115 2.2E-43 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 PRINTS PR00113 Alkaline phosphatase signature 253 282 2.2E-43 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 ProSitePatterns PS00123 Alkaline phosphatase active site. 100 108 - T 01-11-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 Gene3D G3DSA:1.10.60.40 329 416 1.0E-142 T 01-11-2018 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 Gene3D G3DSA:3.40.720.10 49 446 1.0E-142 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 Pfam PF00245 Alkaline phosphatase 45 454 2.9E-133 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_01935 bb3527bf34b1d1944c39c9158f4e12d7 466 SMART SM00098 46 457 1.2E-201 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_17740 b283b4dcb38e218f9c510b1daa6d3286 139 Pfam PF02082 Transcriptional regulator 1 82 1.0E-27 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_17740 b283b4dcb38e218f9c510b1daa6d3286 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 124 3.9E-35 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_17740 b283b4dcb38e218f9c510b1daa6d3286 139 SUPERFAMILY SSF46785 2 127 6.65E-33 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_17740 b283b4dcb38e218f9c510b1daa6d3286 139 Gene3D G3DSA:1.10.10.10 1 139 1.1E-51 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_24260 5a4fd9123f8e49e741bc58fdf852d7c0 371 Gene3D G3DSA:3.30.420.40 202 331 5.2E-23 T 01-11-2018 DOE78_24260 5a4fd9123f8e49e741bc58fdf852d7c0 371 Pfam PF11104 Type IV pilus assembly protein PilM; 12 361 2.8E-8 T 01-11-2018 IPR005883 Type IV pilus assembly protein PilM DOE78_24260 5a4fd9123f8e49e741bc58fdf852d7c0 371 Gene3D G3DSA:3.30.1490.300 81 163 5.2E-23 T 01-11-2018 DOE78_24260 5a4fd9123f8e49e741bc58fdf852d7c0 371 Gene3D G3DSA:3.30.420.40 12 360 5.2E-23 T 01-11-2018 DOE78_13645 6f88b2ed30d75d9f8f3993d855dfab86 202 SUPERFAMILY SSF54001 2 142 3.08E-23 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily DOE78_13645 6f88b2ed30d75d9f8f3993d855dfab86 202 Gene3D G3DSA:3.10.620.30 4 150 1.4E-16 T 01-11-2018 DOE78_13645 6f88b2ed30d75d9f8f3993d855dfab86 202 Pfam PF01841 Transglutaminase-like superfamily 30 138 1.4E-12 T 01-11-2018 IPR002931 Transglutaminase-like DOE78_18290 0077af3d3d81864c304b756ca6c2d3e2 83 Pfam PF05164 Cell division protein ZapA 10 82 7.8E-17 T 01-11-2018 IPR007838 Cell division protein ZapA-like DOE78_18290 0077af3d3d81864c304b756ca6c2d3e2 83 SUPERFAMILY SSF102829 10 82 2.35E-18 T 01-11-2018 IPR036192 Cell division protein ZapA-like superfamily DOE78_04750 0e11e57e045f14c2fb74b382d2ca83a9 323 Pfam PF13437 HlyD family secretion protein 98 191 6.5E-15 T 01-11-2018 DOE78_04750 0e11e57e045f14c2fb74b382d2ca83a9 323 SUPERFAMILY SSF51230 68 127 2.8E-5 T 01-11-2018 IPR011053 Single hybrid motif DOE78_04750 0e11e57e045f14c2fb74b382d2ca83a9 323 Gene3D G3DSA:2.40.50.100 60 124 3.1E-13 T 01-11-2018 DOE78_04750 0e11e57e045f14c2fb74b382d2ca83a9 323 Gene3D G3DSA:2.40.30.170 125 204 2.8E-14 T 01-11-2018 DOE78_04750 0e11e57e045f14c2fb74b382d2ca83a9 323 Gene3D G3DSA:2.40.420.20 205 275 4.4E-10 T 01-11-2018 DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 Pfam PF00664 ABC transporter transmembrane region 36 309 5.1E-59 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 Pfam PF00005 ABC transporter 372 519 2.6E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 SUPERFAMILY SSF90123 17 337 4.45E-84 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 SMART SM00382 380 565 6.3E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 Gene3D G3DSA:3.40.50.300 345 594 9.8E-83 T 01-11-2018 DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 Gene3D G3DSA:1.20.1560.10 2 340 5.3E-97 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_14015 49317db969e8f1b67a26e47091fddd92 594 SUPERFAMILY SSF52540 346 590 1.93E-85 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12780 f77b22e2df2bf091ed328924d0d95e7f 127 SUPERFAMILY SSF52833 10 105 6.15E-23 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_12780 f77b22e2df2bf091ed328924d0d95e7f 127 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 10 85 2.8E-9 T 01-11-2018 DOE78_12780 f77b22e2df2bf091ed328924d0d95e7f 127 Gene3D G3DSA:3.40.30.10 9 102 3.3E-26 T 01-11-2018 DOE78_19365 e330a5ed4efb09ce2b9743bce3ef8a61 73 Gene3D G3DSA:1.10.10.10 10 71 3.4E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_19365 e330a5ed4efb09ce2b9743bce3ef8a61 73 Pfam PF08220 DeoR-like helix-turn-helix domain 11 53 4.4E-11 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_19365 e330a5ed4efb09ce2b9743bce3ef8a61 73 SMART SM00420 11 56 1.4E-5 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_19365 e330a5ed4efb09ce2b9743bce3ef8a61 73 SUPERFAMILY SSF46785 10 60 8.79E-10 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04870 c8b3ec24e1034c6b9b7711018c24049c 223 Pfam PF06570 Protein of unknown function (DUF1129) 17 220 1.5E-18 T 01-11-2018 IPR009214 Protein of unknown function DUF1129 DOE78_04870 c8b3ec24e1034c6b9b7711018c24049c 223 SUPERFAMILY SSF158560 1 90 5.36E-25 T 01-11-2018 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.7E-50 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 Gene3D G3DSA:1.10.720.90 2 55 1.9E-26 T 01-11-2018 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 2.0E-13 T 01-11-2018 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 Pfam PF00453 Ribosomal protein L20 3 109 9.2E-50 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.108 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 SUPERFAMILY SSF74731 2 116 2.62E-50 T 01-11-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 6.9E-41 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 6.9E-41 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 6.9E-41 T 01-11-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18345 1eb32703f8718d00118f1c64c91d50f9 119 Gene3D G3DSA:1.10.1900.20 56 118 1.9E-28 T 01-11-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_01765 9e49b694d8217ca12776eaa0c7a10780 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 170 1.7E-65 T 01-11-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 DOE78_01765 9e49b694d8217ca12776eaa0c7a10780 318 Gene3D G3DSA:3.40.50.300 21 187 6.3E-45 T 01-11-2018 DOE78_01765 9e49b694d8217ca12776eaa0c7a10780 318 Gene3D G3DSA:1.10.8.300 201 309 4.4E-37 T 01-11-2018 DOE78_01765 9e49b694d8217ca12776eaa0c7a10780 318 SUPERFAMILY SSF52540 8 284 1.92E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01765 9e49b694d8217ca12776eaa0c7a10780 318 PIRSF PIRSF002849 2 314 4.3E-137 T 01-11-2018 DOE78_15565 4f91c70b065f215b552e3f43340fe758 257 Pfam PF04445 Putative SAM-dependent methyltransferase 80 228 8.0E-10 T 01-11-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DOE78_15565 4f91c70b065f215b552e3f43340fe758 257 Gene3D G3DSA:3.40.50.150 68 254 4.9E-34 T 01-11-2018 DOE78_15565 4f91c70b065f215b552e3f43340fe758 257 SUPERFAMILY SSF53335 3 256 6.65E-46 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_08175 24f70ff2f3a62a17405756bad14e6bd9 254 Pfam PF02108 Flagellar assembly protein FliH 112 242 3.6E-18 T 01-11-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DOE78_08175 24f70ff2f3a62a17405756bad14e6bd9 254 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 253 1.6E-65 T 01-11-2018 IPR022524 Flagellar assembly FliH, Bacilli DOE78_05830 9b066b13488e1453e84f4e23523e469d 126 Gene3D G3DSA:3.40.630.30 1 108 3.7E-27 T 01-11-2018 DOE78_05830 9b066b13488e1453e84f4e23523e469d 126 Pfam PF13508 Acetyltransferase (GNAT) domain 30 98 7.1E-11 T 01-11-2018 IPR000182 GNAT domain DOE78_05830 9b066b13488e1453e84f4e23523e469d 126 SUPERFAMILY SSF55729 2 106 1.16E-19 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_22610 33d429671ec875d60064b02b089bfedd 484 Gene3D G3DSA:3.30.750.44 70 356 3.1E-91 T 01-11-2018 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 Pfam PF13180 PDZ domain 118 196 2.8E-12 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 Gene3D G3DSA:2.30.42.10 117 202 3.1E-91 T 01-11-2018 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 Pfam PF03572 Peptidase family S41 219 380 1.6E-51 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 SUPERFAMILY SSF50156 88 212 6.18E-23 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 Pfam PF01471 Putative peptidoglycan binding domain 403 458 2.1E-13 T 01-11-2018 IPR002477 Peptidoglycan binding-like DOE78_22610 33d429671ec875d60064b02b089bfedd 484 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 71 399 2.7E-119 T 01-11-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 Gene3D G3DSA:1.10.101.10 378 470 9.2E-17 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 SUPERFAMILY SSF52096 55 385 1.23E-70 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_22610 33d429671ec875d60064b02b089bfedd 484 SMART SM00245 190 381 4.9E-66 T 01-11-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 Gene3D G3DSA:3.90.226.10 203 377 3.1E-91 T 01-11-2018 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 SMART SM00228 117 188 4.5E-17 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_22610 33d429671ec875d60064b02b089bfedd 484 SUPERFAMILY SSF47090 390 461 8.01E-17 T 01-11-2018 IPR036365 PGBD-like superfamily DOE78_08155 eea79154c04756ac464adc61b4a498b8 142 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 142 6.5E-49 T 01-11-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 DOE78_08155 eea79154c04756ac464adc61b4a498b8 142 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 139 1.6E-12 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE78_08155 eea79154c04756ac464adc61b4a498b8 142 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site DOE78_08155 eea79154c04756ac464adc61b4a498b8 142 Pfam PF00460 Flagella basal body rod protein 7 37 2.3E-11 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DOE78_08155 eea79154c04756ac464adc61b4a498b8 142 PIRSF PIRSF002889 1 141 1.7E-15 T 01-11-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DOE78_10120 685b0f96c3427b23656e8cf71e149982 339 Gene3D G3DSA:3.30.420.40 87 199 1.1E-25 T 01-11-2018 DOE78_10120 685b0f96c3427b23656e8cf71e149982 339 SUPERFAMILY SSF46785 12 78 8.83E-8 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10120 685b0f96c3427b23656e8cf71e149982 339 SUPERFAMILY SSF53067 84 284 1.06E-18 T 01-11-2018 DOE78_10120 685b0f96c3427b23656e8cf71e149982 339 Pfam PF00480 ROK family 121 235 7.8E-17 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_10120 685b0f96c3427b23656e8cf71e149982 339 Gene3D G3DSA:1.10.10.10 11 78 7.4E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10120 685b0f96c3427b23656e8cf71e149982 339 Gene3D G3DSA:3.30.420.40 200 237 1.1E-25 T 01-11-2018 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Gene3D G3DSA:1.20.120.160 1 139 1.9E-39 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Gene3D G3DSA:3.30.70.1110 169 253 2.3E-30 T 01-11-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SMART SM00260 541 680 8.0E-38 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SUPERFAMILY SSF55052 169 251 4.97E-24 T 01-11-2018 IPR035891 CheY-binding domain of CheA DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Pfam PF07194 P2 response regulator binding domain 172 251 3.9E-26 T 01-11-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Gene3D G3DSA:2.30.30.40 549 675 3.6E-39 T 01-11-2018 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Gene3D G3DSA:2.40.50.180 572 635 3.6E-39 T 01-11-2018 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SUPERFAMILY SSF50341 548 680 1.7E-32 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Gene3D G3DSA:1.10.287.560 301 361 1.6E-19 T 01-11-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Pfam PF01627 Hpt domain 5 97 3.7E-19 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Gene3D G3DSA:3.30.565.10 362 548 7.4E-60 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SUPERFAMILY SSF47384 302 362 5.49E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 1.0E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 546 1.0E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 1.0E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SUPERFAMILY SSF55874 363 547 1.13E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SMART SM01231 301 361 9.6E-19 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SMART SM00073 3 100 4.3E-37 T 01-11-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 302 360 4.8E-13 T 01-11-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SMART SM00387 406 549 4.5E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 SUPERFAMILY SSF47226 3 120 1.7E-31 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 548 3.3E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_08285 426b145415bd5d44f4c8abde45921c85 681 Pfam PF01584 CheW-like domain 554 680 2.8E-25 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_21875 9ea510e24e318def10075736164b4e2c 217 SUPERFAMILY SSF159888 9 126 3.79E-21 T 01-11-2018 DOE78_21875 9ea510e24e318def10075736164b4e2c 217 PIRSF PIRSF021308 1 198 2.5E-96 T 01-11-2018 IPR016786 Uncharacterised protein YdeI, bacterial DOE78_21875 9ea510e24e318def10075736164b4e2c 217 Pfam PF08818 Domain of unknown function (DU1801) 20 117 5.6E-15 T 01-11-2018 IPR014922 Domain of unknown function DUF1801 DOE78_21875 9ea510e24e318def10075736164b4e2c 217 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 133 192 4.7E-18 T 01-11-2018 DOE78_21875 9ea510e24e318def10075736164b4e2c 217 Gene3D G3DSA:3.40.5.90 173 217 7.6E-7 T 01-11-2018 DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 Gene3D G3DSA:3.40.50.12780 1 414 1.4E-124 T 01-11-2018 DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 176 187 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 Gene3D G3DSA:3.30.300.310 417 516 1.8E-34 T 01-11-2018 DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 430 504 3.1E-20 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 PRINTS PR00154 AMP-binding signature 171 182 6.0E-5 T 01-11-2018 IPR020459 AMP-binding DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 PRINTS PR00154 AMP-binding signature 183 191 6.0E-5 T 01-11-2018 IPR020459 AMP-binding DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 SUPERFAMILY SSF56801 5 515 5.36E-162 T 01-11-2018 DOE78_06080 123f44aff4cca651b6b3efa4acc1e0a8 517 Pfam PF00501 AMP-binding enzyme 8 421 4.2E-115 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Gene3D G3DSA:3.30.450.20 193 308 3.0E-17 T 01-11-2018 DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Pfam PF00989 PAS fold 78 183 1.0E-9 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SMART SM00091 77 143 7.0E-11 T 01-11-2018 IPR000014 PAS domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SMART SM00091 199 265 3.3E-6 T 01-11-2018 IPR000014 PAS domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Gene3D G3DSA:3.30.450.20 66 192 1.5E-21 T 01-11-2018 DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Gene3D G3DSA:3.20.20.450 493 746 6.6E-101 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 PIRSF PIRSF005925 72 200 2.8E-6 T 01-11-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 PIRSF PIRSF005925 201 309 0.039 T 01-11-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 PIRSF PIRSF005925 300 747 5.4E-144 T 01-11-2018 IPR012226 Diguanylate cyclase/phosphodiesterase DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Pfam PF00990 Diguanylate cyclase, GGDEF domain 321 477 1.1E-49 T 01-11-2018 IPR000160 GGDEF domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 196 316 3.9E-18 T 01-11-2018 IPR000014 PAS domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 75 194 3.6E-21 T 01-11-2018 IPR000014 PAS domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SUPERFAMILY SSF55073 326 483 5.65E-48 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Pfam PF00563 EAL domain 499 731 2.4E-74 T 01-11-2018 IPR001633 EAL domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SUPERFAMILY SSF141868 497 743 2.22E-90 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SMART SM00267 310 481 3.1E-63 T 01-11-2018 IPR000160 GGDEF domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Pfam PF13426 PAS domain 217 309 8.1E-9 T 01-11-2018 IPR000014 PAS domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SMART SM00086 146 187 1.4 T 01-11-2018 IPR001610 PAC motif DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SMART SM00086 270 310 25.0 T 01-11-2018 IPR001610 PAC motif DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SMART SM00052 491 736 1.3E-116 T 01-11-2018 IPR001633 EAL domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 Gene3D G3DSA:3.30.70.270 315 492 2.8E-60 T 01-11-2018 DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 480 9.4E-42 T 01-11-2018 IPR000160 GGDEF domain DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SUPERFAMILY SSF55785 184 308 3.89E-20 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_10520 052b6ab4e662877c011a42c8678eaa6f 747 SUPERFAMILY SSF55785 66 185 1.95E-17 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_22055 44afa04eba583527dd4f0eb66ca5e870 76 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.5E-13 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DOE78_22055 44afa04eba583527dd4f0eb66ca5e870 76 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.5E-13 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DOE78_22055 44afa04eba583527dd4f0eb66ca5e870 76 PRINTS PR01651 Protein-export SecG membrane protein signature 56 76 1.5E-13 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DOE78_22055 44afa04eba583527dd4f0eb66ca5e870 76 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 75 1.5E-23 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DOE78_22055 44afa04eba583527dd4f0eb66ca5e870 76 Pfam PF03840 Preprotein translocase SecG subunit 5 75 6.7E-23 T 01-11-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 Gene3D G3DSA:3.40.50.200 119 436 1.8E-95 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 1.2E-17 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 PRINTS PR00723 Subtilisin serine protease family (S8) signature 377 393 1.2E-17 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 1.2E-17 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 Pfam PF00082 Subtilase family 146 427 3.3E-54 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 SUPERFAMILY SSF52743 143 433 5.5E-81 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 378 388 - T 01-11-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DOE78_04140 fc9bbf8e4bc951c471335bee0f6786cf 437 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 151 161 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_17010 7c66abebb7c407b588c8b59f904bd779 485 SUPERFAMILY SSF53383 10 483 5.84E-117 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_17010 7c66abebb7c407b588c8b59f904bd779 485 Gene3D G3DSA:3.90.1150.10 343 470 3.1E-48 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_17010 7c66abebb7c407b588c8b59f904bd779 485 Pfam PF02347 Glycine cleavage system P-protein 37 304 9.2E-11 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DOE78_17010 7c66abebb7c407b588c8b59f904bd779 485 Gene3D G3DSA:3.40.640.10 86 342 5.9E-60 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_17010 7c66abebb7c407b588c8b59f904bd779 485 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 60.357 T 01-11-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 DOE78_22875 b5ac56250bdfb32a9e66f37fd4c17f5b 133 Pfam PF02561 Flagellar protein FliS 7 118 1.0E-41 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 DOE78_22875 b5ac56250bdfb32a9e66f37fd4c17f5b 133 Gene3D G3DSA:1.20.120.340 1 122 1.4E-42 T 01-11-2018 DOE78_22875 b5ac56250bdfb32a9e66f37fd4c17f5b 133 SUPERFAMILY SSF101116 4 123 1.27E-40 T 01-11-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 DOE78_22875 b5ac56250bdfb32a9e66f37fd4c17f5b 133 PIRSF PIRSF039090 1 129 6.0E-36 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 DOE78_22875 b5ac56250bdfb32a9e66f37fd4c17f5b 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 120 6.4E-44 T 01-11-2018 IPR003713 Flagellar protein FliS GO:0044780 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 Pfam PF01175 Urocanase Rossmann-like domain 138 346 1.9E-87 T 01-11-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 Pfam PF17391 Urocanase N-terminal domain 10 135 2.2E-62 T 01-11-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 Hamap MF_00577 Urocanate hydratase [hutU]. 1 553 50.45 T 01-11-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 SUPERFAMILY SSF111326 4 552 7.46E-257 T 01-11-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 ProSitePatterns PS01233 Urocanase signature. 439 454 - T 01-11-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 Gene3D G3DSA:3.40.50.10730 139 346 7.9E-253 T 01-11-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 551 0.0 T 01-11-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 Pfam PF17392 Urocanase C-terminal domain 349 543 1.2E-94 T 01-11-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 PIRSF PIRSF001423 1 556 1.4E-294 T 01-11-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14270 1612297efce9b6ea7cec6c8c8790cc20 556 Gene3D G3DSA:3.40.1770.10 17 539 7.9E-253 T 01-11-2018 DOE78_00775 aa9cf57991715b6621c1830951447064 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 01-11-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00775 aa9cf57991715b6621c1830951447064 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.2E-58 T 01-11-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DOE78_00775 aa9cf57991715b6621c1830951447064 122 SMART SM01374 1 122 2.6E-85 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DOE78_00775 aa9cf57991715b6621c1830951447064 122 SUPERFAMILY SSF50193 1 122 1.26E-50 T 01-11-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00775 aa9cf57991715b6621c1830951447064 122 Gene3D G3DSA:2.40.150.20 1 122 3.5E-53 T 01-11-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00775 aa9cf57991715b6621c1830951447064 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.8E-54 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DOE78_00775 aa9cf57991715b6621c1830951447064 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.26 T 01-11-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 SMART SM00471 46 158 4.3E-9 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Gene3D G3DSA:3.10.20.30 387 459 7.2E-33 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Gene3D G3DSA:3.30.70.260 651 731 3.9E-19 T 01-11-2018 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Gene3D G3DSA:1.10.3210.10 1 196 1.7E-90 T 01-11-2018 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Pfam PF13328 HD domain 31 180 8.7E-53 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_17785 465655c00fd6cd844b304e69091852d4 731 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 728 1.2E-261 T 01-11-2018 IPR004811 RelA/SpoT family GO:0015969 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 7.2E-40 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 SUPERFAMILY SSF109604 10 196 1.35E-76 T 01-11-2018 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 SMART SM00954 240 350 3.8E-69 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Gene3D G3DSA:3.30.460.10 198 329 8.8E-55 T 01-11-2018 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 SUPERFAMILY SSF81271 381 453 4.25E-23 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 SUPERFAMILY SSF55021 654 731 2.54E-13 T 01-11-2018 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 SUPERFAMILY SSF81301 185 398 7.52E-68 T 01-11-2018 DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Pfam PF13291 ACT domain 651 728 1.3E-22 T 01-11-2018 IPR002912 ACT domain DOE78_17785 465655c00fd6cd844b304e69091852d4 731 Pfam PF02824 TGS domain 394 453 1.6E-22 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DOE78_02265 5bf3868ca66c17aa9a7228b8aeeeec2a 778 Pfam PF13538 UvrD-like helicase C-terminal domain 709 756 3.1E-7 T 01-11-2018 IPR027785 UvrD-like helicase C-terminal domain DOE78_02265 5bf3868ca66c17aa9a7228b8aeeeec2a 778 Gene3D G3DSA:3.40.50.300 609 777 2.8E-51 T 01-11-2018 DOE78_02265 5bf3868ca66c17aa9a7228b8aeeeec2a 778 Gene3D G3DSA:1.10.10.160 444 520 9.4E-8 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily DOE78_02265 5bf3868ca66c17aa9a7228b8aeeeec2a 778 Pfam PF13245 AAA domain 214 583 6.8E-11 T 01-11-2018 DOE78_02265 5bf3868ca66c17aa9a7228b8aeeeec2a 778 SUPERFAMILY SSF52540 202 769 9.29E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02265 5bf3868ca66c17aa9a7228b8aeeeec2a 778 Gene3D G3DSA:3.40.50.300 443 585 9.4E-8 T 01-11-2018 DOE78_02265 5bf3868ca66c17aa9a7228b8aeeeec2a 778 Gene3D G3DSA:3.40.50.300 202 422 2.4E-10 T 01-11-2018 DOE78_19490 2f9450fd063386f634697eeda83e6124 331 SUPERFAMILY SSF53850 31 255 2.72E-34 T 01-11-2018 DOE78_19490 2f9450fd063386f634697eeda83e6124 331 Gene3D G3DSA:3.40.190.10 142 331 5.5E-28 T 01-11-2018 DOE78_19490 2f9450fd063386f634697eeda83e6124 331 Pfam PF09084 NMT1/THI5 like 44 253 1.2E-21 T 01-11-2018 IPR015168 SsuA/THI5-like DOE78_19490 2f9450fd063386f634697eeda83e6124 331 Gene3D G3DSA:3.40.190.10 26 127 6.3E-18 T 01-11-2018 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 Gene3D G3DSA:3.40.50.2300 61 310 3.6E-75 T 01-11-2018 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 SUPERFAMILY SSF53822 62 336 9.62E-72 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 SMART SM00354 2 72 8.1E-33 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 Gene3D G3DSA:3.40.50.2300 163 294 3.6E-75 T 01-11-2018 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 SUPERFAMILY SSF47413 3 61 1.13E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 Pfam PF13377 Periplasmic binding protein-like domain 172 335 3.6E-36 T 01-11-2018 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.9E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.9E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 Gene3D G3DSA:1.10.260.40 1 60 1.3E-22 T 01-11-2018 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.8E-17 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_12045 13b29012947c4b930951a7ad6c65015e 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 01-11-2018 DOE78_22705 e7263675b7e1717e0582b1d3ea76b69e 429 SUPERFAMILY SSF51261 244 424 1.73E-43 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_22705 e7263675b7e1717e0582b1d3ea76b69e 429 Gene3D G3DSA:2.70.70.10 281 427 4.3E-35 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_22705 e7263675b7e1717e0582b1d3ea76b69e 429 Pfam PF01551 Peptidase family M23 320 417 3.2E-28 T 01-11-2018 IPR016047 Peptidase M23 DOE78_23570 57fd88f7c9be2401b92d77bd602ca8f3 100 Pfam PF13937 Domain of unknown function (DUF4212) 10 85 6.3E-27 T 01-11-2018 IPR019886 Sodium symporter small subunit, predicted DOE78_23570 57fd88f7c9be2401b92d77bd602ca8f3 100 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 12 86 2.9E-26 T 01-11-2018 IPR019886 Sodium symporter small subunit, predicted DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 Gene3D G3DSA:3.30.565.10 451 584 3.3E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 7.4E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 7.4E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 558 7.4E-6 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 SUPERFAMILY SSF55874 439 580 4.45E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 Pfam PF02743 Cache domain 49 273 1.5E-15 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 Pfam PF06580 Histidine kinase 383 461 1.0E-25 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 Gene3D G3DSA:1.20.1480.50 277 375 5.5E-10 T 01-11-2018 DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 582 2.2E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_08915 0f1163cd5a834735133fa84ef5be4440 588 SMART SM00387 476 583 8.5E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14950 f7459ed54a58179536cb380eae6ddf08 261 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 76 85 - T 01-11-2018 IPR024002 Formate/nitrite transporter, conserved site DOE78_14950 f7459ed54a58179536cb380eae6ddf08 261 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 254 2.0E-70 T 01-11-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DOE78_14950 f7459ed54a58179536cb380eae6ddf08 261 Pfam PF01226 Formate/nitrite transporter 11 251 3.1E-63 T 01-11-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DOE78_14950 f7459ed54a58179536cb380eae6ddf08 261 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 01-11-2018 IPR024002 Formate/nitrite transporter, conserved site DOE78_14950 f7459ed54a58179536cb380eae6ddf08 261 Gene3D G3DSA:1.20.1080.10 3 257 8.8E-74 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DOE78_10535 8e660f7c0a0f9ce602d76de8489cc4b7 145 SUPERFAMILY SSF55729 6 143 6.25E-35 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10535 8e660f7c0a0f9ce602d76de8489cc4b7 145 Pfam PF13673 Acetyltransferase (GNAT) domain 25 142 5.1E-15 T 01-11-2018 IPR000182 GNAT domain DOE78_10535 8e660f7c0a0f9ce602d76de8489cc4b7 145 Gene3D G3DSA:3.40.630.30 2 145 2.2E-39 T 01-11-2018 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 Gene3D G3DSA:3.40.50.720 1 166 6.0E-42 T 01-11-2018 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 225 247 - T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 102 4.3E-14 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 268 7.4E-34 T 01-11-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 SUPERFAMILY SSF51735 5 162 3.8E-24 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 Gene3D G3DSA:1.10.3730.10 167 274 1.0E-36 T 01-11-2018 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 8 269 2.8E-79 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 269 24.468 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 PIRSF PIRSF000193 4 272 3.3E-73 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_24430 a56b3fb9624a330631a8000d71465cbe 285 SUPERFAMILY SSF48179 164 272 2.38E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 Gene3D G3DSA:1.10.287.180 5 78 1.7E-31 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 PIRSF PIRSF006092 1 158 8.6E-50 T 01-11-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 31.865 T 01-11-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 SUPERFAMILY SSF54534 84 157 3.01E-21 T 01-11-2018 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 1.9E-31 T 01-11-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 158 1.1E-27 T 01-11-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 3.0E-59 T 01-11-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 01-11-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 Gene3D G3DSA:3.10.50.30 79 158 2.5E-27 T 01-11-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DOE78_17650 5bcadaeb5fb866b4f5a713ce216ac3b2 158 SUPERFAMILY SSF46557 6 80 2.88E-27 T 01-11-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 Gene3D G3DSA:3.30.300.20 17 106 2.1E-32 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.6E-40 T 01-11-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 SMART SM00322 59 124 5.3E-7 T 01-11-2018 IPR004087 K Homology domain GO:0003676 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 01-11-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 Gene3D G3DSA:3.30.1140.32 107 207 1.1E-40 T 01-11-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.4E-95 T 01-11-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 SUPERFAMILY SSF54814 2 105 5.76E-39 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 Pfam PF07650 KH domain 37 108 3.1E-20 T 01-11-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.213 T 01-11-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DOE78_00755 2483ee81f983d399e6629edf08e835ff 218 SUPERFAMILY SSF54821 107 205 2.49E-38 T 01-11-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_03120 b1b8205869af3f7029ab0089a3ced242 271 SMART SM00062 39 261 9.3E-72 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_03120 b1b8205869af3f7029ab0089a3ced242 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 259 1.1E-64 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_03120 b1b8205869af3f7029ab0089a3ced242 271 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site DOE78_03120 b1b8205869af3f7029ab0089a3ced242 271 SMART SM00079 39 260 4.7E-5 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DOE78_03120 b1b8205869af3f7029ab0089a3ced242 271 Gene3D G3DSA:3.40.190.10 123 221 1.1E-75 T 01-11-2018 DOE78_03120 b1b8205869af3f7029ab0089a3ced242 271 SUPERFAMILY SSF53850 2 261 3.02E-69 T 01-11-2018 DOE78_03120 b1b8205869af3f7029ab0089a3ced242 271 Gene3D G3DSA:3.40.190.10 45 258 1.1E-75 T 01-11-2018 DOE78_20665 66e88d36cb8c884d02b8b5d3e7e49943 435 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 5 415 5.3E-144 T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DOE78_20665 66e88d36cb8c884d02b8b5d3e7e49943 435 Pfam PF00860 Permease family 7 385 9.3E-122 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DOE78_20665 66e88d36cb8c884d02b8b5d3e7e49943 435 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DOE78_20665 66e88d36cb8c884d02b8b5d3e7e49943 435 TIGRFAM TIGR03173 pbuX: xanthine permease 11 417 1.0E-172 T 01-11-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 DOE78_13955 55d24f9a2def4214d5eaf55657ae9684 428 Gene3D G3DSA:3.40.190.10 55 357 2.1E-55 T 01-11-2018 DOE78_13955 55d24f9a2def4214d5eaf55657ae9684 428 Pfam PF13416 Bacterial extracellular solute-binding protein 55 363 5.1E-34 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_13955 55d24f9a2def4214d5eaf55657ae9684 428 SUPERFAMILY SSF53850 16 426 4.35E-56 T 01-11-2018 DOE78_13955 55d24f9a2def4214d5eaf55657ae9684 428 Gene3D G3DSA:3.40.190.10 148 410 2.1E-55 T 01-11-2018 DOE78_16000 b4928c5f31517af6ba11f0aeaf829878 264 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 28 254 2.3E-86 T 01-11-2018 IPR014231 Sporulation protein YpjB DOE78_16000 b4928c5f31517af6ba11f0aeaf829878 264 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 29 255 8.7E-78 T 01-11-2018 IPR014231 Sporulation protein YpjB DOE78_22075 d0684516cf623cffa48562ce659903d4 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 3.1E-211 T 01-11-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 Gene3D G3DSA:3.40.720.10 5 509 6.7E-233 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 SUPERFAMILY SSF64158 77 310 2.88E-93 T 01-11-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 49.815 T 01-11-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 PIRSF PIRSF001492 1 511 6.0E-207 T 01-11-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 Pfam PF01676 Metalloenzyme superfamily 5 497 1.5E-77 T 01-11-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 Gene3D G3DSA:3.40.1450.10 77 312 6.7E-233 T 01-11-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 3.6E-85 T 01-11-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DOE78_22075 d0684516cf623cffa48562ce659903d4 511 SUPERFAMILY SSF53649 4 509 4.97E-73 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_04710 37a6eda95e7a4aab5cd01690fe407d37 72 Pfam PF10842 Protein of unknown function (DUF2642) 8 70 1.8E-28 T 01-11-2018 IPR020139 Protein of unknown function DUF2642 DOE78_04710 37a6eda95e7a4aab5cd01690fe407d37 72 ProDom PD058323 YUZF BH2251 13 70 2.0E-13 T 01-11-2018 IPR020139 Protein of unknown function DUF2642 DOE78_16900 137ccb210ed7aa5bfc199463e14d6b43 373 Gene3D G3DSA:3.30.565.10 253 373 8.9E-21 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_16900 137ccb210ed7aa5bfc199463e14d6b43 373 Pfam PF13185 GAF domain 29 167 8.6E-14 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_16900 137ccb210ed7aa5bfc199463e14d6b43 373 SMART SM00065 26 177 0.0034 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_16900 137ccb210ed7aa5bfc199463e14d6b43 373 Pfam PF07730 Histidine kinase 184 249 1.6E-17 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_16900 137ccb210ed7aa5bfc199463e14d6b43 373 SUPERFAMILY SSF55874 249 372 4.88E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_16900 137ccb210ed7aa5bfc199463e14d6b43 373 SUPERFAMILY SSF55781 7 174 3.05E-18 T 01-11-2018 DOE78_16900 137ccb210ed7aa5bfc199463e14d6b43 373 Gene3D G3DSA:3.30.450.40 4 180 1.6E-20 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 Gene3D G3DSA:1.10.10.60 266 320 3.1E-18 T 01-11-2018 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 Pfam PF12833 Helix-turn-helix domain 239 316 8.9E-17 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 Gene3D G3DSA:1.10.10.60 217 265 2.4E-5 T 01-11-2018 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 SUPERFAMILY SSF51182 62 126 5.34E-9 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 SUPERFAMILY SSF46689 270 317 6.72E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 SMART SM00342 233 316 4.2E-18 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.9E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.9E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 Pfam PF02311 AraC-like ligand binding domain 60 115 2.3E-8 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DOE78_02635 7d5850088c71e9573b76ad885f591da6 322 Gene3D G3DSA:2.60.120.10 26 129 3.1E-10 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 Pfam PF00672 HAMP domain 243 292 2.8E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 SMART SM00304 243 296 1.3E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 384 553 1.4E-45 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 Gene3D G3DSA:1.10.8.500 241 293 3.3E-12 T 01-11-2018 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 SMART SM00283 325 600 9.1E-84 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 46 71 6.2E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 481 6.2E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 423 450 6.2E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 SUPERFAMILY SSF58104 270 600 7.59E-72 T 01-11-2018 DOE78_06995 f9fa5c97c485b229e84b40d55f1f96cd 601 Gene3D G3DSA:1.10.287.950 294 600 3.9E-70 T 01-11-2018 DOE78_20545 7789b34a903af0c4ab466893c1307720 597 Pfam PF00005 ABC transporter 373 521 1.5E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_20545 7789b34a903af0c4ab466893c1307720 597 Gene3D G3DSA:3.40.50.300 347 596 1.0E-82 T 01-11-2018 DOE78_20545 7789b34a903af0c4ab466893c1307720 597 SMART SM00382 382 567 7.9E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_20545 7789b34a903af0c4ab466893c1307720 597 SUPERFAMILY SSF52540 344 592 3.09E-78 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20545 7789b34a903af0c4ab466893c1307720 597 SUPERFAMILY SSF90123 19 315 3.01E-22 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_20545 7789b34a903af0c4ab466893c1307720 597 Pfam PF00664 ABC transporter transmembrane region 60 298 4.4E-11 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_20545 7789b34a903af0c4ab466893c1307720 597 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_20545 7789b34a903af0c4ab466893c1307720 597 Gene3D G3DSA:1.20.1560.10 8 332 3.7E-19 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_03160 409de4a550bd98b65a0b9d48a63f849c 367 Pfam PF03845 Spore germination protein 5 324 5.3E-68 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_03160 409de4a550bd98b65a0b9d48a63f849c 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 4 362 3.7E-68 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_02260 ac1d2a356534708fb3549a2f88bf71c8 276 Gene3D G3DSA:3.20.20.190 20 274 9.5E-89 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DOE78_02260 ac1d2a356534708fb3549a2f88bf71c8 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 41 270 4.8E-52 T 01-11-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DOE78_02260 ac1d2a356534708fb3549a2f88bf71c8 276 SUPERFAMILY SSF51695 38 272 2.54E-75 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 Gene3D G3DSA:3.40.1030.10 69 340 3.7E-99 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 36.977 T 01-11-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 3.3E-18 T 01-11-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 SUPERFAMILY SSF47648 1 66 7.85E-17 T 01-11-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 331 1.9E-117 T 01-11-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 Gene3D G3DSA:1.20.970.10 3 67 3.8E-21 T 01-11-2018 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 SUPERFAMILY SSF52418 72 333 1.44E-89 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_15060 35e22cc383642231769fd52e2163ef9c 342 Pfam PF00591 Glycosyl transferase family, a/b domain 73 322 8.4E-90 T 01-11-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_07010 15e598e7d3114d190bb93dfbd9843098 395 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 37 389 4.8E-144 T 01-11-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 DOE78_07010 15e598e7d3114d190bb93dfbd9843098 395 Gene3D G3DSA:3.90.1200.10 119 394 2.0E-106 T 01-11-2018 DOE78_07010 15e598e7d3114d190bb93dfbd9843098 395 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 395 179.265 T 01-11-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 DOE78_07010 15e598e7d3114d190bb93dfbd9843098 395 SUPERFAMILY SSF56112 7 386 9.7E-87 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_07010 15e598e7d3114d190bb93dfbd9843098 395 Pfam PF01636 Phosphotransferase enzyme family 35 268 2.2E-12 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_07010 15e598e7d3114d190bb93dfbd9843098 395 Gene3D G3DSA:3.30.200.20 1 118 4.7E-46 T 01-11-2018 DOE78_07010 15e598e7d3114d190bb93dfbd9843098 395 PIRSF PIRSF031134 5 394 1.8E-153 T 01-11-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 DOE78_21770 a24afcaff61749856e017c21d718a288 293 SUPERFAMILY SSF161098 10 293 1.14E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21770 a24afcaff61749856e017c21d718a288 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 287 9.5E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_21770 a24afcaff61749856e017c21d718a288 293 Gene3D G3DSA:1.10.3720.10 2 285 1.5E-68 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_18675 a3023bda54a605b3adc5d5294a960310 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 1.0E-11 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_18675 a3023bda54a605b3adc5d5294a960310 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 7.9E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_18675 a3023bda54a605b3adc5d5294a960310 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 7.9E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_18675 a3023bda54a605b3adc5d5294a960310 207 SUPERFAMILY SSF48498 79 197 4.45E-10 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_18675 a3023bda54a605b3adc5d5294a960310 207 SUPERFAMILY SSF46689 3 71 5.13E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_18675 a3023bda54a605b3adc5d5294a960310 207 Gene3D G3DSA:1.10.357.10 1 198 6.0E-36 T 01-11-2018 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 4 239 9.5E-97 T 01-11-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 Pfam PF04055 Radical SAM superfamily 22 179 3.7E-24 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 PIRSF PIRSF000371 42 245 8.6E-48 T 01-11-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 PIRSF PIRSF000371 1 45 5.4E-12 T 01-11-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 Gene3D G3DSA:3.20.20.70 1 244 4.2E-94 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 Pfam PF13353 4Fe-4S single cluster domain 14 144 4.4E-24 T 01-11-2018 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 01-11-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DOE78_14550 1050acc941460b5cc2bf1b9e20d76d5f 246 SUPERFAMILY SSF102114 20 218 7.06E-25 T 01-11-2018 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 157 513 1.9E-121 T 01-11-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 4 139 2.3E-12 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Hamap MF_01228 Methionine--tRNA ligase [metG]. 4 512 51.696 T 01-11-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 259 274 1.5E-33 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 1.5E-33 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.5E-33 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.5E-33 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 351 362 1.5E-33 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.5E-33 T 01-11-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Gene3D G3DSA:1.10.730.10 341 511 1.1E-50 T 01-11-2018 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Gene3D G3DSA:3.40.50.620 8 336 1.0E-151 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Pfam PF09334 tRNA synthetases class I (M) 152 363 1.7E-70 T 01-11-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 SUPERFAMILY SSF52374 5 350 1.69E-118 T 01-11-2018 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 527 652 1.5E-45 T 01-11-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 SUPERFAMILY SSF47323 353 565 3.55E-45 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 SUPERFAMILY SSF50249 546 651 2.25E-32 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Pfam PF08264 Anticodon-binding domain of tRNA 390 490 2.3E-8 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Gene3D G3DSA:2.40.50.140 544 652 1.1E-34 T 01-11-2018 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Gene3D G3DSA:2.170.220.10 119 228 1.0E-151 T 01-11-2018 DOE78_00240 379e14f9cfce4c5644c607159187251e 652 Pfam PF01588 Putative tRNA binding domain 558 649 2.2E-26 T 01-11-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DOE78_02215 80b0ea42bbd0a98de481439d8311415a 180 Pfam PF02525 Flavodoxin-like fold 1 167 7.5E-42 T 01-11-2018 IPR003680 Flavodoxin-like fold DOE78_02215 80b0ea42bbd0a98de481439d8311415a 180 SUPERFAMILY SSF52218 1 171 2.43E-45 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_02215 80b0ea42bbd0a98de481439d8311415a 180 Gene3D G3DSA:3.40.50.360 1 172 5.9E-53 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_13980 73b7fb37665fc25c81ff3d91b56c8658 177 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 85 154 3.3E-16 T 01-11-2018 IPR039561 Peptidase M15C GO:0008233 DOE78_13980 73b7fb37665fc25c81ff3d91b56c8658 177 SUPERFAMILY SSF55166 32 154 5.23E-29 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DOE78_13980 73b7fb37665fc25c81ff3d91b56c8658 177 Gene3D G3DSA:3.30.1380.10 20 154 7.9E-38 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 503 638 2.1E-26 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Pfam PF08279 HTH domain 5 62 1.4E-10 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 SUPERFAMILY SSF55804 502 640 7.06E-29 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 SUPERFAMILY SSF63520 300 404 9.68E-24 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 SUPERFAMILY SSF63520 178 285 1.96E-17 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Gene3D G3DSA:1.10.1790.10 190 287 9.8E-14 T 01-11-2018 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Gene3D G3DSA:1.10.1790.10 302 402 3.8E-24 T 01-11-2018 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Pfam PF05043 Mga helix-turn-helix domain 71 170 2.2E-15 T 01-11-2018 IPR007737 Mga helix-turn-helix domain DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 SUPERFAMILY SSF46785 94 153 1.22E-5 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Pfam PF00874 PRD domain 311 398 1.2E-23 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Pfam PF00874 PRD domain 205 285 8.8E-17 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 SUPERFAMILY SSF52794 411 493 4.81E-8 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Gene3D G3DSA:3.40.930.10 500 639 2.6E-24 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Gene3D G3DSA:3.40.50.2300 411 498 8.7E-12 T 01-11-2018 DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Gene3D G3DSA:1.10.10.10 2 65 7.9E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05960 552dc5762e292acd6ef83ebf58532bfa 641 Gene3D G3DSA:1.10.10.10 83 158 8.1E-8 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 3.5E-16 T 01-11-2018 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 3.5E-16 T 01-11-2018 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 PRINTS PR00070 Dihydrofolate reductase signature 89 103 3.5E-16 T 01-11-2018 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 3.5E-16 T 01-11-2018 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 SUPERFAMILY SSF53597 1 158 9.96E-61 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 01-11-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 Gene3D G3DSA:3.40.430.10 1 159 1.1E-60 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 PIRSF PIRSF000194 1 159 3.7E-61 T 01-11-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 DOE78_15545 fab7d1908b1f891058e075114fbbe3b2 159 Pfam PF00186 Dihydrofolate reductase 1 157 2.5E-64 T 01-11-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DOE78_06330 985dd3efea6f84114d71cffda268bd4a 332 Pfam PF11553 Protein of unknown function (DUF3231) 168 327 3.1E-38 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_06330 985dd3efea6f84114d71cffda268bd4a 332 Pfam PF11553 Protein of unknown function (DUF3231) 2 153 1.2E-46 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_06330 985dd3efea6f84114d71cffda268bd4a 332 Gene3D G3DSA:1.20.1260.10 1 144 1.6E-14 T 01-11-2018 IPR012347 Ferritin-like DOE78_06330 985dd3efea6f84114d71cffda268bd4a 332 Gene3D G3DSA:1.20.1260.10 174 315 9.3E-8 T 01-11-2018 IPR012347 Ferritin-like DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 Hamap MF_00300 Chorismate synthase [aroC]. 1 369 35.911 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 ProSitePatterns PS00789 Chorismate synthase signature 3. 336 352 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 PIRSF PIRSF001456 1 379 5.0E-128 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 TIGRFAM TIGR00033 aroC: chorismate synthase 1 365 1.2E-125 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 SUPERFAMILY SSF103263 1 385 7.85E-145 T 01-11-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 ProSitePatterns PS00788 Chorismate synthase signature 2. 128 144 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 Pfam PF01264 Chorismate synthase 1 361 2.4E-123 T 01-11-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 Gene3D G3DSA:3.60.150.10 1 386 1.9E-149 T 01-11-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_16070 28eab9ba987e0b7f36f539b73dbc5541 387 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 01-11-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DOE78_18630 a83d4d32cfe587e26e1f7bf4fea2ab10 266 SUPERFAMILY SSF111331 8 265 2.22E-57 T 01-11-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE78_18630 a83d4d32cfe587e26e1f7bf4fea2ab10 266 Gene3D G3DSA:3.40.50.10330 33 266 1.3E-71 T 01-11-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DOE78_18630 a83d4d32cfe587e26e1f7bf4fea2ab10 266 Hamap MF_00361 NAD kinase [nadK]. 5 266 21.592 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DOE78_18630 a83d4d32cfe587e26e1f7bf4fea2ab10 266 Pfam PF01513 ATP-NAD kinase 38 251 1.2E-18 T 01-11-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DOE78_18630 a83d4d32cfe587e26e1f7bf4fea2ab10 266 Gene3D G3DSA:2.60.200.30 108 244 1.3E-71 T 01-11-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DOE78_19370 940bec34f82b51f2709458727514dd96 239 Gene3D G3DSA:3.30.70.1560 129 212 1.0E-56 T 01-11-2018 DOE78_19370 940bec34f82b51f2709458727514dd96 239 Gene3D G3DSA:3.10.290.10 1 58 7.6E-17 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_19370 940bec34f82b51f2709458727514dd96 239 SMART SM00363 1 59 4.9E-9 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_19370 940bec34f82b51f2709458727514dd96 239 Pfam PF00849 RNA pseudouridylate synthase 62 195 4.5E-21 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_19370 940bec34f82b51f2709458727514dd96 239 Pfam PF01479 S4 domain 2 45 3.3E-9 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_19370 940bec34f82b51f2709458727514dd96 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 01-11-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DOE78_19370 940bec34f82b51f2709458727514dd96 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 227 6.4E-48 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DOE78_19370 940bec34f82b51f2709458727514dd96 239 SUPERFAMILY SSF55174 1 59 1.06E-12 T 01-11-2018 DOE78_19370 940bec34f82b51f2709458727514dd96 239 SUPERFAMILY SSF55120 45 235 8.96E-45 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_19370 940bec34f82b51f2709458727514dd96 239 Gene3D G3DSA:3.30.70.580 62 230 1.0E-56 T 01-11-2018 DOE78_00320 3e7a799bbeebf4c4a083f9cb6edeff70 186 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 01-11-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DOE78_00320 3e7a799bbeebf4c4a083f9cb6edeff70 186 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 38.027 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DOE78_00320 3e7a799bbeebf4c4a083f9cb6edeff70 186 SUPERFAMILY SSF53178 1 185 1.44E-71 T 01-11-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DOE78_00320 3e7a799bbeebf4c4a083f9cb6edeff70 186 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 1.3E-59 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DOE78_00320 3e7a799bbeebf4c4a083f9cb6edeff70 186 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 185 6.5E-71 T 01-11-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DOE78_00320 3e7a799bbeebf4c4a083f9cb6edeff70 186 Gene3D G3DSA:3.40.50.1470 1 186 2.1E-72 T 01-11-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 SMART SM00091 207 275 1.4E-4 T 01-11-2018 IPR000014 PAS domain DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 SUPERFAMILY SSF103190 33 157 2.35E-34 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 Pfam PF17203 Single cache domain 3 31 164 1.6E-28 T 01-11-2018 IPR033463 Single cache domain 3 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 Gene3D G3DSA:3.30.565.10 390 527 7.2E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 SMART SM00387 414 526 1.2E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 SUPERFAMILY SSF55890 317 395 2.35E-8 T 01-11-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 Pfam PF00989 PAS fold 208 266 9.4E-7 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 523 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 1.5E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 SUPERFAMILY SSF55874 395 523 2.23E-26 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 524 1.5E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 SUPERFAMILY SSF55785 206 305 1.54E-10 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 Gene3D G3DSA:3.30.450.20 27 166 2.2E-44 T 01-11-2018 DOE78_09320 7cbbce0041726ad9e317ec8e866d238b 528 Gene3D G3DSA:3.30.450.20 193 308 2.0E-24 T 01-11-2018 DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 SUPERFAMILY SSF54106 102 151 9.16E-8 T 01-11-2018 DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Pfam PF07676 WD40-like Beta Propeller Repeat 160 175 0.02 T 01-11-2018 IPR011659 WD40-like Beta Propeller DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Pfam PF07676 WD40-like Beta Propeller Repeat 185 211 9.0E-5 T 01-11-2018 IPR011659 WD40-like Beta Propeller DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 SUPERFAMILY SSF54106 3 48 3.79E-10 T 01-11-2018 DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Gene3D G3DSA:3.10.350.10 48 100 1.4E-12 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Pfam PF01476 LysM domain 5 48 5.4E-14 T 01-11-2018 IPR018392 LysM domain DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Pfam PF01476 LysM domain 55 97 1.8E-11 T 01-11-2018 IPR018392 LysM domain DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Pfam PF01476 LysM domain 103 151 1.3E-11 T 01-11-2018 IPR018392 LysM domain DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 SUPERFAMILY SSF54106 53 97 1.1E-8 T 01-11-2018 DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 SMART SM00257 4 48 2.6E-12 T 01-11-2018 IPR018392 LysM domain DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 SMART SM00257 53 97 1.5E-11 T 01-11-2018 IPR018392 LysM domain DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 SMART SM00257 102 151 6.9E-12 T 01-11-2018 IPR018392 LysM domain DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Gene3D G3DSA:2.120.10.30 191 383 8.9E-31 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Gene3D G3DSA:3.10.350.10 2 47 4.0E-14 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 Gene3D G3DSA:3.10.350.10 101 151 4.6E-15 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_04405 ca390dff3a2e34c0532ec0fcfd84d1d3 605 SUPERFAMILY SSF82171 157 466 1.44E-38 T 01-11-2018 DOE78_22040 83213a89299b64bd2be04457a9156a97 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 1.2E-60 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 DOE78_22040 83213a89299b64bd2be04457a9156a97 154 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 01-11-2018 IPR020081 SsrA-binding protein, conserved site DOE78_22040 83213a89299b64bd2be04457a9156a97 154 SUPERFAMILY SSF74982 7 132 1.83E-54 T 01-11-2018 IPR023620 Small protein B DOE78_22040 83213a89299b64bd2be04457a9156a97 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 7.0E-49 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 DOE78_22040 83213a89299b64bd2be04457a9156a97 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 78.287 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 DOE78_22040 83213a89299b64bd2be04457a9156a97 154 Pfam PF01668 SmpB protein 9 150 4.4E-64 T 01-11-2018 IPR000037 SsrA-binding protein GO:0003723 DOE78_22040 83213a89299b64bd2be04457a9156a97 154 Gene3D G3DSA:2.40.280.10 3 128 1.4E-53 T 01-11-2018 IPR023620 Small protein B DOE78_01285 1210adf107f5c5aea4f3a6e8f21ed2e8 271 Gene3D G3DSA:3.40.50.1000 1 259 3.0E-82 T 01-11-2018 IPR023214 HAD superfamily DOE78_01285 1210adf107f5c5aea4f3a6e8f21ed2e8 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 01-11-2018 DOE78_01285 1210adf107f5c5aea4f3a6e8f21ed2e8 271 Gene3D G3DSA:3.30.1240.10 83 187 3.0E-82 T 01-11-2018 DOE78_01285 1210adf107f5c5aea4f3a6e8f21ed2e8 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 2 257 1.4E-68 T 01-11-2018 DOE78_01285 1210adf107f5c5aea4f3a6e8f21ed2e8 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 1 231 8.7E-25 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_01285 1210adf107f5c5aea4f3a6e8f21ed2e8 271 SUPERFAMILY SSF56784 1 263 4.31E-73 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_01285 1210adf107f5c5aea4f3a6e8f21ed2e8 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 1 257 2.4E-66 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_16275 a0956bcf1f7f52a4359dba8cfafc2e0c 194 Pfam PF12822 ECF transporter, substrate-specific component 7 176 8.9E-29 T 01-11-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 DOE78_16275 a0956bcf1f7f52a4359dba8cfafc2e0c 194 PIRSF PIRSF037778 2 189 2.7E-49 T 01-11-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 DOE78_16275 a0956bcf1f7f52a4359dba8cfafc2e0c 194 Gene3D G3DSA:1.10.1760.20 3 191 2.0E-53 T 01-11-2018 DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 SUPERFAMILY SSF50331 245 344 4.42E-9 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 SUPERFAMILY SSF52540 4 248 4.52E-81 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 Gene3D G3DSA:2.40.50.140 284 343 4.8E-6 T 01-11-2018 DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 Gene3D G3DSA:3.40.50.300 1 244 7.3E-75 T 01-11-2018 DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 Gene3D G3DSA:2.40.50.100 245 344 4.8E-6 T 01-11-2018 DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 Pfam PF08402 TOBE domain 284 343 2.2E-9 T 01-11-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 SMART SM00382 27 218 1.2E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_11920 ca519323109964b0ef271b4d35cc053e 360 Pfam PF00005 ABC transporter 18 168 3.6E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 Gene3D G3DSA:1.10.540.10 2 145 1.6E-45 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 SUPERFAMILY SSF56645 22 263 1.01E-72 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 Gene3D G3DSA:1.20.140.10 423 594 9.1E-58 T 01-11-2018 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 143 5.7E-30 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 Gene3D G3DSA:2.40.110.10 146 251 7.3E-35 T 01-11-2018 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 378 397 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 Gene3D G3DSA:1.20.140.10 252 422 5.5E-49 T 01-11-2018 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 SUPERFAMILY SSF47203 257 422 3.54E-42 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 149 161 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 415 5.1E-32 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DOE78_21200 6f2fb7cb357351b51afe6e0847ab52f6 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 239 5.9E-22 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 SUPERFAMILY SSF53623 106 314 3.14E-53 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 457 34.043 T 01-11-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 Gene3D G3DSA:3.40.1390.10 2 81 4.7E-24 T 01-11-2018 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 396 2.6E-13 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 Pfam PF08245 Mur ligase middle domain 111 296 3.5E-49 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 455 1.9E-136 T 01-11-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 Gene3D G3DSA:3.90.190.20 316 458 2.3E-41 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 Gene3D G3DSA:3.40.1190.10 87 315 7.7E-66 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 Pfam PF01225 Mur ligase family, catalytic domain 26 101 1.0E-11 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 SUPERFAMILY SSF53244 318 456 1.4E-34 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_01280 096e37584f43979c050eadd04ae9ffb8 458 SUPERFAMILY SSF63418 11 102 9.55E-24 T 01-11-2018 IPR035911 MurE/MurF, N-terminal DOE78_17205 5dc4d9114e8eefc0135be07842e6354f 277 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 31 277 4.6E-125 T 01-11-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DOE78_17205 5dc4d9114e8eefc0135be07842e6354f 277 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_17205 5dc4d9114e8eefc0135be07842e6354f 277 Pfam PF00005 ABC transporter 46 202 2.1E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_17205 5dc4d9114e8eefc0135be07842e6354f 277 SUPERFAMILY SSF52540 28 264 2.04E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17205 5dc4d9114e8eefc0135be07842e6354f 277 SMART SM00382 55 249 1.8E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_17205 5dc4d9114e8eefc0135be07842e6354f 277 Gene3D G3DSA:3.40.50.300 29 273 5.0E-63 T 01-11-2018 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 SUPERFAMILY SSF51261 522 671 1.66E-53 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 Pfam PF00367 phosphotransferase system, EIIB 430 462 6.3E-13 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 528 649 9.4E-51 T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 502 1.6E-245 T 01-11-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 Pfam PF02378 Phosphotransferase system, EIIC 13 343 3.9E-92 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 529 648 3.4E-45 T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 SUPERFAMILY SSF55604 428 500 8.11E-21 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 Gene3D G3DSA:2.70.70.10 515 675 1.8E-61 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 440 457 - T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 Gene3D G3DSA:3.30.1360.60 423 503 2.0E-27 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 403 486 4.1E-22 T 01-11-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DOE78_01795 70a0e59b3d5f038467d8ecb24a5057d6 675 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 590 602 - T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DOE78_14835 b946662cc7b686109ea8ec8da12c058e 131 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 7.0E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14835 b946662cc7b686109ea8ec8da12c058e 131 SUPERFAMILY SSF46785 5 79 1.26E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_14835 b946662cc7b686109ea8ec8da12c058e 131 Gene3D G3DSA:1.10.10.10 9 123 1.5E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14835 b946662cc7b686109ea8ec8da12c058e 131 SMART SM00345 16 75 3.1E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_02160 c1da27db76daf70d468ae18dbfd77155 687 Gene3D G3DSA:1.10.1740.10 3 89 8.7E-6 T 01-11-2018 DOE78_02160 c1da27db76daf70d468ae18dbfd77155 687 Pfam PF13786 Domain of unknown function (DUF4179) 248 332 5.0E-10 T 01-11-2018 IPR025436 Domain of unknown function DUF4179 DOE78_02160 c1da27db76daf70d468ae18dbfd77155 687 SUPERFAMILY SSF88659 100 157 1.12E-11 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_02160 c1da27db76daf70d468ae18dbfd77155 687 Gene3D G3DSA:1.10.10.10 98 160 1.1E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02160 c1da27db76daf70d468ae18dbfd77155 687 Pfam PF04545 Sigma-70, region 4 107 156 5.9E-10 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_02160 c1da27db76daf70d468ae18dbfd77155 687 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 157 3.6E-14 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_14640 d761c8cd425b18cd70c93a348de5d10a 251 Gene3D G3DSA:3.20.20.370 1 251 5.3E-101 T 01-11-2018 DOE78_14640 d761c8cd425b18cd70c93a348de5d10a 251 SUPERFAMILY SSF88713 1 248 1.04E-96 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_14640 d761c8cd425b18cd70c93a348de5d10a 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 44.843 T 01-11-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DOE78_14640 d761c8cd425b18cd70c93a348de5d10a 251 Pfam PF03746 LamB/YcsF family 3 240 5.7E-100 T 01-11-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SMART SM00448 394 508 6.4E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Gene3D G3DSA:3.40.50.2300 580 825 4.0E-65 T 01-11-2018 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Gene3D G3DSA:3.30.565.10 212 367 5.7E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Gene3D G3DSA:3.40.50.2300 663 799 4.0E-65 T 01-11-2018 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SUPERFAMILY SSF52172 393 513 1.14E-29 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Gene3D G3DSA:1.10.287.130 138 211 8.0E-29 T 01-11-2018 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SUPERFAMILY SSF47384 131 214 2.94E-24 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 261 368 1.9E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Pfam PF00512 His Kinase A (phospho-acceptor) domain 147 213 1.2E-21 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SMART SM00388 147 213 1.3E-25 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SUPERFAMILY SSF55874 202 367 3.54E-47 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SUPERFAMILY SSF53822 554 834 3.89E-59 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Gene3D G3DSA:3.40.50.2300 379 520 1.2E-32 T 01-11-2018 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Pfam PF13407 Periplasmic binding protein domain 559 802 2.7E-44 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SMART SM00387 260 369 3.7E-35 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Pfam PF00072 Response regulator receiver domain 397 508 2.7E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 366 1.3E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 325 1.3E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 311 1.3E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 1.3E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 134 1.5E-8 T 01-11-2018 IPR000014 PAS domain DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 SUPERFAMILY SSF55785 19 134 1.26E-7 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_19860 55ea4412e63ab3022f8192d026a6483a 854 Gene3D G3DSA:3.30.450.20 14 137 3.6E-12 T 01-11-2018 DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 Gene3D G3DSA:1.10.10.10 5 73 2.3E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 Gene3D G3DSA:1.20.120.530 79 210 4.6E-20 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 SUPERFAMILY SSF48008 80 203 5.49E-17 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 SMART SM00345 13 71 3.8E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 SUPERFAMILY SSF46785 7 75 2.27E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 4.0E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 Pfam PF07729 FCD domain 81 203 1.8E-18 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_03105 db4556d39967f3b966c3da25ed43ac87 215 SMART SM00895 81 209 1.3E-5 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_01250 cd379f87998b09acee064ab296af5f43 263 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 263 35.901 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DOE78_01250 cd379f87998b09acee064ab296af5f43 263 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 10 248 4.4E-37 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DOE78_01250 cd379f87998b09acee064ab296af5f43 263 Pfam PF02654 Cobalamin-5-phosphate synthase 11 250 4.1E-47 T 01-11-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 409 2.3E-21 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 63 193 9.7E-9 T 01-11-2018 IPR000014 PAS domain DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 261 1.1E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 SMART SM00388 201 264 3.1E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 Gene3D G3DSA:3.30.565.10 258 410 4.5E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 Pfam PF08448 PAS fold 73 187 3.3E-10 T 01-11-2018 IPR013656 PAS fold-4 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 Gene3D G3DSA:3.30.450.20 52 198 3.7E-17 T 01-11-2018 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 SUPERFAMILY SSF47384 197 262 3.92E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 390 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 409 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 1.8E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 SMART SM00387 305 412 1.8E-30 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 SUPERFAMILY SSF55785 59 184 2.28E-12 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 Gene3D G3DSA:1.10.287.130 204 257 9.2E-17 T 01-11-2018 DOE78_14940 51834912b8a56d45c4eef44b670064b9 421 SUPERFAMILY SSF55874 254 412 2.36E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 SMART SM00347 22 123 4.6E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 Gene3D G3DSA:1.10.10.10 1 137 2.7E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 Pfam PF01047 MarR family 47 88 4.1E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 SUPERFAMILY SSF46785 27 135 1.43E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 5.5E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 5.5E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 5.5E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14025 e15e2a2f9ef28e748c895804158dd8a4 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 5.5E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 Gene3D G3DSA:3.40.50.720 1 232 3.9E-52 T 01-11-2018 DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 Pfam PF00106 short chain dehydrogenase 3 199 1.5E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.3E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 9.3E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 9.3E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.3E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.3E-20 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 SUPERFAMILY SSF51735 2 232 1.61E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 5.5E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.5E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02210 79e82e1cc8e004bd54325b303b655580 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 5.5E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_00865 412327ba324b4f32f3a454a180db1c8b 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00865 412327ba324b4f32f3a454a180db1c8b 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 28.76 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00865 412327ba324b4f32f3a454a180db1c8b 120 Pfam PF01196 Ribosomal protein L17 16 120 2.7E-39 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00865 412327ba324b4f32f3a454a180db1c8b 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 120 4.5E-48 T 01-11-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00865 412327ba324b4f32f3a454a180db1c8b 120 Gene3D G3DSA:3.90.1030.10 1 120 2.1E-50 T 01-11-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00865 412327ba324b4f32f3a454a180db1c8b 120 SUPERFAMILY SSF64263 2 120 6.8E-45 T 01-11-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_20750 dce3b50b1a8716d853530e67d4fd552e 387 Gene3D G3DSA:3.40.50.1970 1 184 1.1E-56 T 01-11-2018 DOE78_20750 dce3b50b1a8716d853530e67d4fd552e 387 SUPERFAMILY SSF56796 1 385 8.5E-119 T 01-11-2018 DOE78_20750 dce3b50b1a8716d853530e67d4fd552e 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 378 2.8E-102 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DOE78_20750 dce3b50b1a8716d853530e67d4fd552e 387 Gene3D G3DSA:1.20.1090.10 185 386 1.9E-47 T 01-11-2018 DOE78_20750 dce3b50b1a8716d853530e67d4fd552e 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_20750 dce3b50b1a8716d853530e67d4fd552e 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_16505 a6d9a1d5607f2d86b1e07aa7db29389c 229 Pfam PF01144 Coenzyme A transferase 10 214 6.2E-76 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_16505 a6d9a1d5607f2d86b1e07aa7db29389c 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 215 4.1E-79 T 01-11-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 DOE78_16505 a6d9a1d5607f2d86b1e07aa7db29389c 229 SMART SM00882 5 216 3.0E-91 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_16505 a6d9a1d5607f2d86b1e07aa7db29389c 229 Gene3D G3DSA:3.40.1080.10 1 225 2.2E-96 T 01-11-2018 DOE78_16505 a6d9a1d5607f2d86b1e07aa7db29389c 229 SUPERFAMILY SSF100950 4 223 5.09E-88 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_16505 a6d9a1d5607f2d86b1e07aa7db29389c 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 01-11-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 Gene3D G3DSA:3.40.50.720 133 270 1.2E-97 T 01-11-2018 DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 SMART SM00829 10 319 2.6E-27 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 Pfam PF13602 Zinc-binding dehydrogenase 192 319 8.3E-24 T 01-11-2018 DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 SUPERFAMILY SSF50129 1 155 1.02E-35 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 95 2.4E-6 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 01-11-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 Gene3D G3DSA:3.90.180.10 18 319 1.2E-97 T 01-11-2018 DOE78_11395 25f1a32e96e1b376e74eb519f712fcd0 321 SUPERFAMILY SSF51735 122 287 7.66E-35 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_04990 4f2a1881bc580c64e6c06c05cd052443 401 Gene3D G3DSA:1.20.1250.20 3 189 4.1E-42 T 01-11-2018 DOE78_04990 4f2a1881bc580c64e6c06c05cd052443 401 Pfam PF07690 Major Facilitator Superfamily 19 350 1.2E-46 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_04990 4f2a1881bc580c64e6c06c05cd052443 401 Gene3D G3DSA:1.20.1250.20 195 395 3.6E-49 T 01-11-2018 DOE78_04990 4f2a1881bc580c64e6c06c05cd052443 401 SUPERFAMILY SSF103473 7 385 1.44E-63 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_23165 fc62dbb8e956f84065ea54aac90cb96f 315 SUPERFAMILY SSF51182 2 314 1.46E-105 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_23165 fc62dbb8e956f84065ea54aac90cb96f 315 PIRSF PIRSF036894 2 315 3.3E-132 T 01-11-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 DOE78_23165 fc62dbb8e956f84065ea54aac90cb96f 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 100 314 2.0E-55 T 01-11-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DOE78_23165 fc62dbb8e956f84065ea54aac90cb96f 315 Gene3D G3DSA:2.60.120.10 226 315 4.8E-27 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_23165 fc62dbb8e956f84065ea54aac90cb96f 315 Gene3D G3DSA:2.60.120.10 1 225 1.6E-95 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_23165 fc62dbb8e956f84065ea54aac90cb96f 315 Pfam PF01238 Phosphomannose isomerase type I 7 314 1.9E-49 T 01-11-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DOE78_10705 f2869a021268400029147db2589e35b3 303 SUPERFAMILY SSF53850 88 298 7.45E-40 T 01-11-2018 DOE78_10705 f2869a021268400029147db2589e35b3 303 Gene3D G3DSA:1.10.10.10 1 84 3.4E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10705 f2869a021268400029147db2589e35b3 303 SUPERFAMILY SSF46785 1 84 2.05E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10705 f2869a021268400029147db2589e35b3 303 Pfam PF03466 LysR substrate binding domain 89 295 2.0E-43 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_10705 f2869a021268400029147db2589e35b3 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_10705 f2869a021268400029147db2589e35b3 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_10705 f2869a021268400029147db2589e35b3 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_10705 f2869a021268400029147db2589e35b3 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-20 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_10705 f2869a021268400029147db2589e35b3 303 Gene3D G3DSA:3.40.190.290 90 301 9.6E-49 T 01-11-2018 DOE78_00750 738d0c3c9765bed93b82f3427e61f69a 113 SUPERFAMILY SSF54843 1 112 8.89E-45 T 01-11-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00750 738d0c3c9765bed93b82f3427e61f69a 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 30.266 T 01-11-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00750 738d0c3c9765bed93b82f3427e61f69a 113 Pfam PF00237 Ribosomal protein L22p/L17e 6 108 8.3E-38 T 01-11-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DOE78_00750 738d0c3c9765bed93b82f3427e61f69a 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 3.4E-52 T 01-11-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00750 738d0c3c9765bed93b82f3427e61f69a 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 01-11-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00750 738d0c3c9765bed93b82f3427e61f69a 113 Gene3D G3DSA:3.90.470.10 1 113 9.5E-51 T 01-11-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 Gene3D G3DSA:1.10.287.10 2 89 9.5E-38 T 01-11-2018 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 SMART SM01387 8 88 9.8E-53 T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 5.0E-36 T 01-11-2018 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 2.3E-42 T 01-11-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.397 T 01-11-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 Pfam PF00312 Ribosomal protein S15 8 88 1.5E-38 T 01-11-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08415 7979d370201fdd4fb9afe47611119de1 89 SUPERFAMILY SSF47060 3 89 3.24E-37 T 01-11-2018 IPR009068 S15/NS1, RNA-binding DOE78_15940 3cb609e2ee4b5a1d6db6ecd12d34d3e2 127 Pfam PF02261 Aspartate decarboxylase 1 114 1.1E-51 T 01-11-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DOE78_15940 3cb609e2ee4b5a1d6db6ecd12d34d3e2 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 97 4.0E-40 T 01-11-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DOE78_15940 3cb609e2ee4b5a1d6db6ecd12d34d3e2 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.7E-59 T 01-11-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DOE78_15940 3cb609e2ee4b5a1d6db6ecd12d34d3e2 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 71.529 T 01-11-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DOE78_15940 3cb609e2ee4b5a1d6db6ecd12d34d3e2 127 SUPERFAMILY SSF50692 1 121 7.29E-50 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DOE78_15940 3cb609e2ee4b5a1d6db6ecd12d34d3e2 127 PIRSF PIRSF006246 1 126 9.8E-55 T 01-11-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DOE78_15940 3cb609e2ee4b5a1d6db6ecd12d34d3e2 127 Gene3D G3DSA:2.40.40.20 1 126 2.4E-53 T 01-11-2018 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 PIRSF PIRSF000111 1 867 0.0 T 01-11-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 Gene3D G3DSA:1.20.1090.10 651 867 1.6E-73 T 01-11-2018 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 Gene3D G3DSA:3.40.309.10 227 412 5.4E-182 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 Gene3D G3DSA:3.40.50.1970 457 649 9.8E-64 T 01-11-2018 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 Pfam PF00171 Aldehyde dehydrogenase family 10 409 2.3E-25 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 SUPERFAMILY SSF53720 16 460 1.83E-80 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 SUPERFAMILY SSF56796 455 866 2.36E-124 T 01-11-2018 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 638 666 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 Pfam PF00465 Iron-containing alcohol dehydrogenase 464 851 5.4E-120 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DOE78_01175 80d51f61a00f64785d3a27493e541163 867 Gene3D G3DSA:3.40.605.10 19 450 5.4E-182 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 Gene3D G3DSA:3.50.50.60 117 240 8.8E-116 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 Gene3D G3DSA:3.50.50.60 8 301 8.8E-116 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.1E-37 T 01-11-2018 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 3.1E-37 T 01-11-2018 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.1E-37 T 01-11-2018 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 3.1E-37 T 01-11-2018 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 3.1E-37 T 01-11-2018 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 4.9E-71 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 SUPERFAMILY SSF51905 4 303 2.14E-57 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 01-11-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 305 5.6E-120 T 01-11-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DOE78_22150 472d6e37b4fcb15e11ae03115862b3f8 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 294 2.8E-50 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_01890 cac5c5a5b8987a28a7e77102cab33ffb 580 SUPERFAMILY SSF51556 82 327 5.1E-6 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_01890 cac5c5a5b8987a28a7e77102cab33ffb 580 SUPERFAMILY SSF51338 24 113 2.56E-11 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_01890 cac5c5a5b8987a28a7e77102cab33ffb 580 Gene3D G3DSA:3.20.20.140 82 325 3.4E-82 T 01-11-2018 DOE78_01890 cac5c5a5b8987a28a7e77102cab33ffb 580 Pfam PF01979 Amidohydrolase family 79 362 4.6E-20 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_01890 cac5c5a5b8987a28a7e77102cab33ffb 580 Gene3D G3DSA:2.30.40.10 21 362 3.4E-82 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_01890 cac5c5a5b8987a28a7e77102cab33ffb 580 Pfam PF13382 Adenine deaminase C-terminal domain 410 570 2.4E-36 T 01-11-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DOE78_17665 2d7cfe5b798d4d2c34109b58f8cfc1ce 309 Pfam PF01136 Peptidase family U32 75 306 1.1E-65 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 Gene3D G3DSA:3.40.50.2300 77 325 3.2E-59 T 01-11-2018 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 Gene3D G3DSA:3.40.50.2300 159 326 3.2E-59 T 01-11-2018 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 SMART SM00354 1 74 7.6E-21 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.2E-17 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 SUPERFAMILY SSF47413 1 48 1.75E-12 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 Gene3D G3DSA:1.10.260.40 1 47 1.1E-18 T 01-11-2018 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 Pfam PF13377 Periplasmic binding protein-like domain 168 333 3.5E-39 T 01-11-2018 DOE78_11865 bff5ff176bde2cdb7c84120fad4f298a 337 SUPERFAMILY SSF53822 62 327 2.94E-53 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 SUPERFAMILY SSF55174 15 101 3.53E-16 T 01-11-2018 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 SMART SM00363 15 79 4.5E-13 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 SUPERFAMILY SSF55120 73 300 3.5E-81 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 Pfam PF01479 S4 domain 15 61 4.3E-12 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 Gene3D G3DSA:3.10.290.10 4 70 5.8E-19 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 Pfam PF00849 RNA pseudouridylate synthase 88 241 6.3E-36 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 300 4.8E-105 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_07825 eaae6ccc212c6c9fcfd344e5b5e092cf 303 Gene3D G3DSA:3.30.2350.10 80 303 4.3E-76 T 01-11-2018 DOE78_06730 5bb42f408d826d2dd21895d7f3d7b0d3 157 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 30 147 9.3E-39 T 01-11-2018 IPR005562 SpoVA DOE78_06730 5bb42f408d826d2dd21895d7f3d7b0d3 157 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 12 151 4.6E-62 T 01-11-2018 IPR014203 Sporulation stage V, protein AC DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 Gene3D G3DSA:3.20.20.70 1 285 3.1E-116 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 7.0E-116 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 SUPERFAMILY SSF51569 1 285 8.2E-106 T 01-11-2018 DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 2.7E-132 T 01-11-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 PIRSF PIRSF001359 1 285 1.7E-127 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 2.9E-105 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_23825 b3ff457c4e1843dc126d134a4f5407b7 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_11625 a7b40a1b7d00e578142e2ed542761ffd 318 Gene3D G3DSA:3.40.50.720 126 285 2.4E-97 T 01-11-2018 DOE78_11625 a7b40a1b7d00e578142e2ed542761ffd 318 SUPERFAMILY SSF50129 4 151 5.33E-33 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_11625 a7b40a1b7d00e578142e2ed542761ffd 318 Pfam PF13602 Zinc-binding dehydrogenase 188 314 3.7E-27 T 01-11-2018 DOE78_11625 a7b40a1b7d00e578142e2ed542761ffd 318 SMART SM00829 10 314 3.6E-22 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_11625 a7b40a1b7d00e578142e2ed542761ffd 318 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 97 8.3E-8 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_11625 a7b40a1b7d00e578142e2ed542761ffd 318 SUPERFAMILY SSF51735 118 290 4.9E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11625 a7b40a1b7d00e578142e2ed542761ffd 318 Gene3D G3DSA:3.90.180.10 9 314 2.4E-97 T 01-11-2018 DOE78_14225 0ab7d412323606014b1bc07d1c9402a4 419 Pfam PF05139 Erythromycin esterase 61 405 1.3E-104 T 01-11-2018 IPR007815 Erythromycin esterase GO:0046677 DOE78_14225 0ab7d412323606014b1bc07d1c9402a4 419 Gene3D G3DSA:1.20.1440.30 141 269 1.5E-66 T 01-11-2018 DOE78_14225 0ab7d412323606014b1bc07d1c9402a4 419 Gene3D G3DSA:3.30.1870.10 63 140 1.5E-66 T 01-11-2018 DOE78_14225 0ab7d412323606014b1bc07d1c9402a4 419 SUPERFAMILY SSF159501 7 411 6.28E-115 T 01-11-2018 DOE78_14225 0ab7d412323606014b1bc07d1c9402a4 419 PIRSF PIRSF036794 12 416 8.8E-83 T 01-11-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type DOE78_14225 0ab7d412323606014b1bc07d1c9402a4 419 Gene3D G3DSA:3.40.1660.10 8 406 1.5E-66 T 01-11-2018 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 185 323 1.1E-54 T 01-11-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 193 214 - T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 SUPERFAMILY SSF51735 7 183 6.27E-61 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 PIRSF PIRSF000114 1 337 2.1E-114 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 138 158 1.4E-44 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 1.4E-44 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.4E-44 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 1.4E-44 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 178 202 1.4E-44 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 203 227 1.4E-44 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 165 3.8E-55 T 01-11-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 Gene3D G3DSA:3.40.50.720 1 188 7.9E-67 T 01-11-2018 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 327 38.462 T 01-11-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 Gene3D G3DSA:1.10.1040.10 189 332 1.4E-52 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_16130 8fba22fd71b03668cbea576b1197eaa0 350 SUPERFAMILY SSF48179 185 336 7.99E-58 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_09705 9a835a683d271deb52e017b00abc3344 107 SMART SM00418 8 89 1.3E-21 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_09705 9a835a683d271deb52e017b00abc3344 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 9.8E-11 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_09705 9a835a683d271deb52e017b00abc3344 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.8E-11 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_09705 9a835a683d271deb52e017b00abc3344 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 9.8E-11 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_09705 9a835a683d271deb52e017b00abc3344 107 Gene3D G3DSA:1.10.10.10 2 107 8.3E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09705 9a835a683d271deb52e017b00abc3344 107 SUPERFAMILY SSF46785 7 92 8.93E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09705 9a835a683d271deb52e017b00abc3344 107 Pfam PF01022 Bacterial regulatory protein, arsR family 15 59 5.2E-13 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_12965 c75924aaa2db5fe7e1340639bef5ba22 568 Gene3D G3DSA:1.20.1480.50 167 264 2.1E-11 T 01-11-2018 DOE78_12965 c75924aaa2db5fe7e1340639bef5ba22 568 SMART SM00304 210 263 5.7E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_12965 c75924aaa2db5fe7e1340639bef5ba22 568 SUPERFAMILY SSF58104 235 566 4.19E-65 T 01-11-2018 DOE78_12965 c75924aaa2db5fe7e1340639bef5ba22 568 Pfam PF00672 HAMP domain 210 259 6.8E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_12965 c75924aaa2db5fe7e1340639bef5ba22 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 520 3.3E-38 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_12965 c75924aaa2db5fe7e1340639bef5ba22 568 Gene3D G3DSA:1.10.287.950 265 567 2.8E-61 T 01-11-2018 DOE78_12965 c75924aaa2db5fe7e1340639bef5ba22 568 SMART SM00283 292 567 1.2E-64 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_20970 af5b1ee76e2ce703c187ff10192d1059 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 1.1E-47 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_20970 af5b1ee76e2ce703c187ff10192d1059 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.2E-6 T 01-11-2018 DOE78_20970 af5b1ee76e2ce703c187ff10192d1059 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.2E-6 T 01-11-2018 DOE78_20970 af5b1ee76e2ce703c187ff10192d1059 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-6 T 01-11-2018 DOE78_20970 af5b1ee76e2ce703c187ff10192d1059 405 SUPERFAMILY SSF51905 3 333 1.04E-30 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_20970 af5b1ee76e2ce703c187ff10192d1059 405 Gene3D G3DSA:3.50.50.100 1 405 9.2E-139 T 01-11-2018 DOE78_05415 4603b8290c75d58af468d2151909e409 631 Gene3D G3DSA:3.40.50.300 87 319 1.0E-7 T 01-11-2018 DOE78_05415 4603b8290c75d58af468d2151909e409 631 PIRSF PIRSF000549 1 631 1.2E-262 T 01-11-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 DOE78_05415 4603b8290c75d58af468d2151909e409 631 SUPERFAMILY SSF52540 67 444 2.89E-11 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05415 4603b8290c75d58af468d2151909e409 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 3.7E-92 T 01-11-2018 IPR010650 PrkA C-terminal domain DOE78_05415 4603b8290c75d58af468d2151909e409 631 Pfam PF08298 PrkA AAA domain 22 370 4.6E-151 T 01-11-2018 IPR013153 PrkA AAA domain DOE78_05415 4603b8290c75d58af468d2151909e409 631 SMART SM00763 21 371 2.2E-195 T 01-11-2018 IPR013153 PrkA AAA domain DOE78_04520 63d30fbe17c5d81258cdb38c5a0a204c 316 SUPERFAMILY SSF53335 156 262 9.77E-19 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_04520 63d30fbe17c5d81258cdb38c5a0a204c 316 Pfam PF01170 Putative RNA methylase family UPF0020 156 253 7.4E-8 T 01-11-2018 IPR000241 Putative RNA methylase domain DOE78_04520 63d30fbe17c5d81258cdb38c5a0a204c 316 Gene3D G3DSA:3.40.50.150 152 316 6.1E-22 T 01-11-2018 DOE78_02675 e78ffc2a8a3ee796209758f80089ab47 238 Pfam PF00005 ABC transporter 21 169 1.1E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_02675 e78ffc2a8a3ee796209758f80089ab47 238 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_02675 e78ffc2a8a3ee796209758f80089ab47 238 SMART SM00382 30 218 1.2E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_02675 e78ffc2a8a3ee796209758f80089ab47 238 Gene3D G3DSA:3.40.50.300 1 236 2.2E-73 T 01-11-2018 DOE78_02675 e78ffc2a8a3ee796209758f80089ab47 238 SUPERFAMILY SSF52540 1 228 1.45E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 48 378 5.4E-81 T 01-11-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 PRINTS PR00843 Glycosyl hydrolase family 30 signature 36 56 3.0E-16 T 01-11-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 PRINTS PR00843 Glycosyl hydrolase family 30 signature 72 98 3.0E-16 T 01-11-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 PRINTS PR00843 Glycosyl hydrolase family 30 signature 166 183 3.0E-16 T 01-11-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 PRINTS PR00843 Glycosyl hydrolase family 30 signature 235 257 3.0E-16 T 01-11-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 Gene3D G3DSA:2.60.40.1180 28 441 6.0E-159 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 382 441 1.6E-13 T 01-11-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 SUPERFAMILY SSF51445 46 382 1.69E-85 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_22665 922d548f62123980ee7d998fe2c2f394 445 Gene3D G3DSA:3.20.20.80 44 382 6.0E-159 T 01-11-2018 DOE78_00420 5fe8a8acd82231f7eb9ae28f7d0c8d8e 289 SUPERFAMILY SSF54534 145 241 6.91E-21 T 01-11-2018 DOE78_00420 5fe8a8acd82231f7eb9ae28f7d0c8d8e 289 Gene3D G3DSA:1.10.4030.30 35 266 4.5E-32 T 01-11-2018 DOE78_00420 5fe8a8acd82231f7eb9ae28f7d0c8d8e 289 Pfam PF13624 SurA N-terminal domain 13 120 2.8E-6 T 01-11-2018 DOE78_00420 5fe8a8acd82231f7eb9ae28f7d0c8d8e 289 Pfam PF13145 PPIC-type PPIASE domain 131 256 5.5E-17 T 01-11-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DOE78_00420 5fe8a8acd82231f7eb9ae28f7d0c8d8e 289 SUPERFAMILY SSF109998 34 180 4.32E-23 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily DOE78_00420 5fe8a8acd82231f7eb9ae28f7d0c8d8e 289 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 179 200 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DOE78_00420 5fe8a8acd82231f7eb9ae28f7d0c8d8e 289 Gene3D G3DSA:3.10.50.40 151 252 4.5E-32 T 01-11-2018 DOE78_13410 248458293c45686f048580df858ce537 400 Gene3D G3DSA:3.40.640.10 58 294 6.5E-139 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_13410 248458293c45686f048580df858ce537 400 SUPERFAMILY SSF53383 8 395 1.06E-109 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_13410 248458293c45686f048580df858ce537 400 Pfam PF00155 Aminotransferase class I and II 43 383 1.3E-65 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_13410 248458293c45686f048580df858ce537 400 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 396 8.3E-195 T 01-11-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type DOE78_13410 248458293c45686f048580df858ce537 400 Gene3D G3DSA:3.90.1150.10 38 386 6.5E-139 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_13410 248458293c45686f048580df858ce537 400 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 01-11-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 PIRSF PIRSF000722 1 395 7.0E-155 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 SUPERFAMILY SSF53067 1 194 3.3E-74 T 01-11-2018 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 Pfam PF00871 Acetokinase family 3 388 1.3E-172 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 PRINTS PR00471 Acetate kinase family signature 321 337 1.6E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 PRINTS PR00471 Acetate kinase family signature 299 312 1.6E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 PRINTS PR00471 Acetate kinase family signature 375 387 1.6E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 PRINTS PR00471 Acetate kinase family signature 4 15 1.6E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 PRINTS PR00471 Acetate kinase family signature 172 185 1.6E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 PRINTS PR00471 Acetate kinase family signature 202 223 1.6E-47 T 01-11-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 1.7E-178 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 SUPERFAMILY SSF53067 158 393 9.54E-93 T 01-11-2018 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 Gene3D G3DSA:3.30.420.40 195 395 1.4E-82 T 01-11-2018 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 01-11-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 199.272 T 01-11-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DOE78_18595 e145f93e7b84ca490e1d5b6c5d3ce667 395 Gene3D G3DSA:3.30.420.40 2 194 5.4E-77 T 01-11-2018 DOE78_08595 ec341dc6b2a6abc9815ab094cbe375d1 144 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 7.8E-24 T 01-11-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DOE78_08595 ec341dc6b2a6abc9815ab094cbe375d1 144 SUPERFAMILY SSF158622 4 123 3.92E-36 T 01-11-2018 IPR023378 YheA/YmcA-like domain superfamily DOE78_08595 ec341dc6b2a6abc9815ab094cbe375d1 144 Gene3D G3DSA:1.20.1500.10 1 124 3.3E-36 T 01-11-2018 IPR023378 YheA/YmcA-like domain superfamily DOE78_08595 ec341dc6b2a6abc9815ab094cbe375d1 144 PIRSF PIRSF021287 1 123 1.4E-50 T 01-11-2018 IPR016783 Biofilm formation YmcA DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 1.9E-59 T 01-11-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 SMART SM00825 Beta-ketoacyl synthase 6 412 3.5E-16 T 01-11-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 PIRSF PIRSF000447 1 412 4.5E-185 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 SUPERFAMILY SSF53901 214 411 3.53E-77 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 Gene3D G3DSA:3.40.47.10 1 254 2.3E-103 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 01-11-2018 IPR018201 Beta-ketoacyl synthase, active site DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 SUPERFAMILY SSF53901 4 251 1.23E-74 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 3.7E-40 T 01-11-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 2.8E-200 T 01-11-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DOE78_06545 0c7eb27702339c9148f5fe3875f90acf 412 Gene3D G3DSA:3.40.47.10 256 400 6.4E-58 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 Gene3D G3DSA:3.20.20.80 1 109 7.5E-49 T 01-11-2018 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 Gene3D G3DSA:2.60.40.1180 477 554 1.5E-19 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 SUPERFAMILY SSF51445 3 473 2.56E-159 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 SUPERFAMILY SSF51011 476 553 1.02E-15 T 01-11-2018 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 Pfam PF00128 Alpha amylase, catalytic domain 28 373 3.5E-120 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 PRINTS PR00110 Alpha-amylase signature 92 103 4.3E-5 T 01-11-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 PRINTS PR00110 Alpha-amylase signature 193 204 4.3E-5 T 01-11-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 PRINTS PR00110 Alpha-amylase signature 316 328 4.3E-5 T 01-11-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 Gene3D G3DSA:3.20.20.80 171 476 1.8E-124 T 01-11-2018 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 Gene3D G3DSA:3.90.400.10 110 170 4.9E-34 T 01-11-2018 DOE78_24115 c438a364d2673a8b6848424ecf35de5a 554 SMART SM00642 13 415 8.7E-170 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_19865 be1a85f480c8bb77c1d855b6b33b9045 256 Pfam PF03741 Integral membrane protein TerC family 15 206 1.0E-47 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 DOE78_19865 be1a85f480c8bb77c1d855b6b33b9045 256 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 248 4.7E-87 T 01-11-2018 IPR022493 Integral membrane YkoY DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 249 1.4E-30 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 SUPERFAMILY SSF88659 101 168 3.14E-14 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 250 7.4E-83 T 01-11-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 SUPERFAMILY SSF88946 5 100 8.01E-26 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 PRINTS PR00046 Major sigma-70 factor signature 79 87 1.5E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 PRINTS PR00046 Major sigma-70 factor signature 219 234 1.5E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 PRINTS PR00046 Major sigma-70 factor signature 234 245 1.5E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 PRINTS PR00046 Major sigma-70 factor signature 55 68 1.5E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 PRINTS PR00046 Major sigma-70 factor signature 202 214 1.5E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 Gene3D G3DSA:1.10.1740.10 14 97 1.3E-27 T 01-11-2018 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 SUPERFAMILY SSF88659 174 251 6.17E-19 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 Gene3D G3DSA:1.20.140.160 99 252 1.6E-44 T 01-11-2018 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 Pfam PF04545 Sigma-70, region 4 199 247 2.1E-15 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 Pfam PF04542 Sigma-70 region 2 28 100 6.8E-14 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 Pfam PF04539 Sigma-70 region 3 108 183 7.4E-11 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DOE78_08305 07b5d39f93995598de0bf1e02d3b8174 253 PIRSF PIRSF000770 8 253 1.4E-42 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17690 bdcc0b8f3599aa5bd30f8b502f4b544a 89 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 83 2.9E-36 T 01-11-2018 IPR009309 Uncharacterised protein family UPF0297 DOE78_17690 bdcc0b8f3599aa5bd30f8b502f4b544a 89 PIRSF PIRSF037258 1 88 6.6E-45 T 01-11-2018 IPR009309 Uncharacterised protein family UPF0297 DOE78_17690 bdcc0b8f3599aa5bd30f8b502f4b544a 89 Hamap MF_01507 UPF0297 protein . 1 85 28.172 T 01-11-2018 IPR009309 Uncharacterised protein family UPF0297 DOE78_16085 84b5d3434025dbbb3c927b4875f73a0c 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 2.8E-166 T 01-11-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 DOE78_16085 84b5d3434025dbbb3c927b4875f73a0c 320 Pfam PF00348 Polyprenyl synthetase 31 264 2.8E-70 T 01-11-2018 IPR000092 Polyprenyl synthetase GO:0008299 DOE78_16085 84b5d3434025dbbb3c927b4875f73a0c 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site DOE78_16085 84b5d3434025dbbb3c927b4875f73a0c 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 01-11-2018 IPR033749 Polyprenyl synthetase, conserved site DOE78_16085 84b5d3434025dbbb3c927b4875f73a0c 320 Gene3D G3DSA:1.10.600.10 7 320 1.2E-100 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_16085 84b5d3434025dbbb3c927b4875f73a0c 320 SUPERFAMILY SSF48576 7 319 4.64E-89 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SMART SM00091 460 533 0.0025 T 01-11-2018 IPR000014 PAS domain DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Gene3D G3DSA:3.30.450.40 294 449 5.9E-11 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SMART SM00388 584 650 5.7E-22 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Pfam PF00672 HAMP domain 216 262 3.4E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 PRINTS PR00344 Bacterial sensor protein C-terminal signature 766 784 3.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 PRINTS PR00344 Bacterial sensor protein C-terminal signature 790 803 3.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 745 3.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 PRINTS PR00344 Bacterial sensor protein C-terminal signature 749 759 3.1E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 694 803 2.4E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Pfam PF00512 His Kinase A (phospho-acceptor) domain 584 650 5.3E-19 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SMART SM00387 694 806 4.3E-37 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Gene3D G3DSA:3.30.450.20 450 572 1.4E-10 T 01-11-2018 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SUPERFAMILY SSF47384 570 651 2.16E-21 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SUPERFAMILY SSF158472 214 262 2.09E-5 T 01-11-2018 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SUPERFAMILY SSF55781 303 468 2.98E-12 T 01-11-2018 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SUPERFAMILY SSF52172 821 939 1.11E-23 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Gene3D G3DSA:3.30.565.10 656 817 3.6E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SUPERFAMILY SSF55874 639 805 3.14E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SUPERFAMILY SSF55785 457 576 4.19E-10 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Gene3D G3DSA:3.40.50.12740 822 950 4.3E-24 T 01-11-2018 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Gene3D G3DSA:1.20.1480.50 167 270 1.7E-8 T 01-11-2018 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SMART SM00304 212 265 0.0011 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Gene3D G3DSA:1.10.287.130 573 652 4.2E-25 T 01-11-2018 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 SMART SM00448 823 935 7.5E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05510 e11b1be23ea2e6e5a9f25facc79fcfef 963 Pfam PF00072 Response regulator receiver domain 825 935 1.3E-16 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_14055 de5db3861ac8c766048d6b38f2159ec3 363 Gene3D G3DSA:3.40.718.10 1 355 1.5E-127 T 01-11-2018 DOE78_14055 de5db3861ac8c766048d6b38f2159ec3 363 SUPERFAMILY SSF53659 2 350 5.18E-114 T 01-11-2018 DOE78_14055 de5db3861ac8c766048d6b38f2159ec3 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 348 8.2E-88 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DOE78_14055 de5db3861ac8c766048d6b38f2159ec3 363 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 349 4.1E-149 T 01-11-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 DOE78_14055 de5db3861ac8c766048d6b38f2159ec3 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 01-11-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DOE78_14055 de5db3861ac8c766048d6b38f2159ec3 363 SMART SM01329 6 349 7.1E-171 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DOE78_20010 c077669b0b5e52e550de21a44fd965a2 312 Pfam PF04198 Putative sugar-binding domain 61 310 5.0E-67 T 01-11-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DOE78_20010 c077669b0b5e52e550de21a44fd965a2 312 SUPERFAMILY SSF46689 11 56 3.94E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20010 c077669b0b5e52e550de21a44fd965a2 312 Gene3D G3DSA:3.40.50.1360 57 312 9.8E-78 T 01-11-2018 DOE78_20010 c077669b0b5e52e550de21a44fd965a2 312 SUPERFAMILY SSF100950 58 311 5.12E-66 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_20010 c077669b0b5e52e550de21a44fd965a2 312 Gene3D G3DSA:1.10.10.60 3 52 7.3E-22 T 01-11-2018 DOE78_20010 c077669b0b5e52e550de21a44fd965a2 312 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 51 6.7E-7 T 01-11-2018 DOE78_20715 ffb978d09142a60eb5b368bf918b2fcb 694 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 296 4.5E-38 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_20715 ffb978d09142a60eb5b368bf918b2fcb 694 Gene3D G3DSA:3.90.1310.30 64 562 5.7E-218 T 01-11-2018 DOE78_20715 ffb978d09142a60eb5b368bf918b2fcb 694 Gene3D G3DSA:1.10.10.1230 89 185 5.7E-218 T 01-11-2018 DOE78_20715 ffb978d09142a60eb5b368bf918b2fcb 694 Pfam PF00905 Penicillin binding protein transpeptidase domain 343 665 5.9E-66 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_20715 ffb978d09142a60eb5b368bf918b2fcb 694 Gene3D G3DSA:3.40.710.10 310 661 5.7E-218 T 01-11-2018 DOE78_20715 ffb978d09142a60eb5b368bf918b2fcb 694 SUPERFAMILY SSF56519 58 309 4.71E-34 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_20715 ffb978d09142a60eb5b368bf918b2fcb 694 SUPERFAMILY SSF56601 310 668 4.02E-63 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_13595 02c24edef66d0626a4d6ddb8293c7ba6 288 Pfam PF13616 PPIC-type PPIASE domain 137 232 7.5E-30 T 01-11-2018 DOE78_13595 02c24edef66d0626a4d6ddb8293c7ba6 288 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 283 20.318 T 01-11-2018 IPR023059 Foldase protein PrsA GO:0003755 DOE78_13595 02c24edef66d0626a4d6ddb8293c7ba6 288 Gene3D G3DSA:3.10.50.40 141 232 4.9E-43 T 01-11-2018 DOE78_13595 02c24edef66d0626a4d6ddb8293c7ba6 288 SUPERFAMILY SSF109998 32 170 1.05E-20 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily DOE78_13595 02c24edef66d0626a4d6ddb8293c7ba6 288 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 169 190 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DOE78_13595 02c24edef66d0626a4d6ddb8293c7ba6 288 SUPERFAMILY SSF54534 130 230 1.77E-32 T 01-11-2018 DOE78_13595 02c24edef66d0626a4d6ddb8293c7ba6 288 Gene3D G3DSA:1.10.4030.30 44 246 4.9E-43 T 01-11-2018 DOE78_04815 cc0dd0e22147f6e224ba039b750f9b14 196 PIRSF PIRSF016661 1 185 1.5E-42 T 01-11-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DOE78_04815 cc0dd0e22147f6e224ba039b750f9b14 196 Gene3D G3DSA:1.10.1760.20 1 187 1.8E-46 T 01-11-2018 DOE78_04815 cc0dd0e22147f6e224ba039b750f9b14 196 Pfam PF02632 BioY family 34 180 5.9E-35 T 01-11-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DOE78_24190 3822d1ff6e15d537e38c8d2b49c79e80 372 SUPERFAMILY SSF53756 3 356 1.14E-50 T 01-11-2018 DOE78_24190 3822d1ff6e15d537e38c8d2b49c79e80 372 Gene3D G3DSA:3.40.50.2000 149 341 1.0E-41 T 01-11-2018 DOE78_24190 3822d1ff6e15d537e38c8d2b49c79e80 372 Pfam PF00534 Glycosyl transferases group 1 170 334 1.1E-23 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_24190 3822d1ff6e15d537e38c8d2b49c79e80 372 Gene3D G3DSA:3.40.50.2000 13 351 1.0E-41 T 01-11-2018 DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 SMART SM00487 21 218 7.7E-65 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 SMART SM00490 254 335 6.5E-36 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 Gene3D G3DSA:3.40.50.300 211 433 3.8E-55 T 01-11-2018 DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 SUPERFAMILY SSF52540 72 353 1.17E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 Pfam PF00270 DEAD/DEAH box helicase 26 190 4.5E-48 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 Gene3D G3DSA:3.40.50.300 1 207 7.9E-76 T 01-11-2018 DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 2 496 45.027 T 01-11-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 DOE78_01295 d465ad69e36dbce23c53dcf91218dcce 496 Pfam PF00271 Helicase conserved C-terminal domain 227 335 3.8E-30 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_05465 dbba822249edf1a82749d58267dfc680 547 SMART SM00421 483 540 8.1E-22 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_05465 dbba822249edf1a82749d58267dfc680 547 Pfam PF10114 Sensory domain found in PocR 5 152 2.3E-5 T 01-11-2018 IPR018771 PocR domain DOE78_05465 dbba822249edf1a82749d58267dfc680 547 Gene3D G3DSA:1.10.10.10 477 546 8.7E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05465 dbba822249edf1a82749d58267dfc680 547 ProSitePatterns PS00622 LuxR-type HTH domain signature. 500 527 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_05465 dbba822249edf1a82749d58267dfc680 547 Pfam PF00196 Bacterial regulatory proteins, luxR family 485 536 3.3E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_05465 dbba822249edf1a82749d58267dfc680 547 Gene3D G3DSA:3.30.450.40 160 319 4.0E-5 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_05465 dbba822249edf1a82749d58267dfc680 547 SUPERFAMILY SSF46894 480 544 4.08E-20 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_05465 dbba822249edf1a82749d58267dfc680 547 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 516 528 3.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_05465 dbba822249edf1a82749d58267dfc680 547 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 486 500 3.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_05465 dbba822249edf1a82749d58267dfc680 547 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 500 516 3.7E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 SUPERFAMILY SSF52922 535 665 6.54E-37 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 663 4.7E-285 T 01-11-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 SUPERFAMILY SSF52518 6 325 9.13E-116 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 SMART SM00861 354 525 1.0E-66 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 Pfam PF02779 Transketolase, pyrimidine binding domain 353 524 2.1E-42 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 Gene3D G3DSA:3.40.50.920 539 661 5.5E-40 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 338 3.6E-152 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 Gene3D G3DSA:3.40.50.970 333 537 5.0E-77 T 01-11-2018 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 SUPERFAMILY SSF52518 341 526 1.71E-66 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 Gene3D G3DSA:3.40.50.970 1 332 3.0E-127 T 01-11-2018 DOE78_22555 717d212b5ef3f46fb7706c35f09d375e 668 Pfam PF02780 Transketolase, C-terminal domain 553 656 7.8E-9 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_11470 5ba2ad7e95fcf94b91c44b685014a69f 122 Gene3D G3DSA:1.10.1220.160 2 105 1.4E-10 T 01-11-2018 IPR038472 DndE superfamily DOE78_11470 5ba2ad7e95fcf94b91c44b685014a69f 122 TIGRFAM TIGR03184 DNA_S_dndE: DNA sulfur modification protein DndE 5 103 1.1E-22 T 01-11-2018 IPR014969 DNA sulphur modification protein DndE DOE78_11470 5ba2ad7e95fcf94b91c44b685014a69f 122 Pfam PF08870 DNA sulphur modification protein DndE 4 107 3.6E-25 T 01-11-2018 IPR014969 DNA sulphur modification protein DndE DOE78_08400 385e8c7501cdb40ebf45c8bd6ba222fe 123 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 01-11-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DOE78_08400 385e8c7501cdb40ebf45c8bd6ba222fe 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 107 28.264 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 DOE78_08400 385e8c7501cdb40ebf45c8bd6ba222fe 123 SUPERFAMILY SSF89919 2 110 8.76E-36 T 01-11-2018 IPR023799 Ribosome-binding factor A domain superfamily DOE78_08400 385e8c7501cdb40ebf45c8bd6ba222fe 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 8.2E-42 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 DOE78_08400 385e8c7501cdb40ebf45c8bd6ba222fe 123 Gene3D G3DSA:3.30.300.20 1 116 2.4E-40 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_08400 385e8c7501cdb40ebf45c8bd6ba222fe 123 Pfam PF02033 Ribosome-binding factor A 4 107 1.4E-34 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 DOE78_08400 385e8c7501cdb40ebf45c8bd6ba222fe 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 94 3.0E-39 T 01-11-2018 IPR000238 Ribosome-binding factor A GO:0006364 DOE78_01265 4ec8f28b5a749a5f618da4f4df107ebb 127 Gene3D G3DSA:3.10.180.10 8 127 5.0E-28 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_01265 4ec8f28b5a749a5f618da4f4df107ebb 127 SUPERFAMILY SSF54593 4 126 5.37E-28 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_01265 4ec8f28b5a749a5f618da4f4df107ebb 127 Pfam PF12681 Glyoxalase-like domain 6 125 5.0E-30 T 01-11-2018 IPR025870 Glyoxalase-like domain DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 Pfam PF00664 ABC transporter transmembrane region 18 276 8.8E-11 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 Gene3D G3DSA:3.40.50.300 320 570 8.1E-75 T 01-11-2018 DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 Pfam PF00005 ABC transporter 352 499 7.2E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 SUPERFAMILY SSF90123 6 322 7.19E-41 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 Gene3D G3DSA:1.20.1560.10 6 318 2.4E-27 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 530 1.8E-170 T 01-11-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 SMART SM00382 361 546 6.3E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05070 cd03d15d8dbb977469b2db4005cfd33b 574 SUPERFAMILY SSF52540 333 569 2.25E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21175 9a5d11e909a4132e4f12b85a56f836ea 101 Pfam PF00085 Thioredoxin 9 85 4.5E-7 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 DOE78_21175 9a5d11e909a4132e4f12b85a56f836ea 101 Gene3D G3DSA:3.40.30.10 5 101 5.9E-12 T 01-11-2018 DOE78_21175 9a5d11e909a4132e4f12b85a56f836ea 101 SUPERFAMILY SSF52833 10 99 6.96E-14 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_23665 5743f71d4ca65abdfee9aedead58f6e4 170 SUPERFAMILY SSF56770 18 163 4.97E-67 T 01-11-2018 DOE78_23665 5743f71d4ca65abdfee9aedead58f6e4 170 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 19 161 1.0E-73 T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23665 5743f71d4ca65abdfee9aedead58f6e4 170 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 9 160 43.144 T 01-11-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23665 5743f71d4ca65abdfee9aedead58f6e4 170 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 46 155 4.8E-26 T 01-11-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23665 5743f71d4ca65abdfee9aedead58f6e4 170 Gene3D G3DSA:3.40.50.12280 4 169 2.6E-78 T 01-11-2018 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 Gene3D G3DSA:3.40.50.10860 9 272 1.8E-104 T 01-11-2018 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 4.8E-42 T 01-11-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 235 251 3.5E-51 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 252 270 3.5E-51 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.5E-51 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.5E-51 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.5E-51 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.5E-51 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 4 279 35.996 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 SUPERFAMILY SSF51735 130 277 9.43E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 SUPERFAMILY SSF53223 5 122 2.3E-39 T 01-11-2018 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 Gene3D G3DSA:3.40.50.720 7 255 1.8E-104 T 01-11-2018 DOE78_15175 0559a37e916292e27dda9ccbeed1575e 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 129 278 3.2E-59 T 01-11-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 Pfam PF01131 DNA topoisomerase 163 589 1.2E-104 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 Gene3D G3DSA:3.40.50.140 2 162 6.8E-50 T 01-11-2018 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 Gene3D G3DSA:1.10.290.10 287 410 3.1E-122 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 SMART SM00436 135 229 3.8E-20 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 Gene3D G3DSA:2.70.20.10 223 481 3.1E-122 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 Gene3D G3DSA:1.10.460.10 171 599 3.1E-122 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 SMART SM00493 2 135 4.9E-14 T 01-11-2018 IPR006171 TOPRIM domain DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 SUPERFAMILY SSF56712 3 605 2.75E-152 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 SMART SM00437 278 554 2.1E-46 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 Pfam PF01751 Toprim domain 4 143 1.0E-11 T 01-11-2018 IPR006171 TOPRIM domain DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.6E-18 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 517 531 3.6E-18 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 109 122 3.6E-18 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.6E-18 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_15620 c258137bfc885ed8372e50ec2ac685e1 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 3.6E-18 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_15385 277fe51e6a6a00fb1d513ccd845e12b1 71 SUPERFAMILY SSF140652 2 70 7.19E-30 T 01-11-2018 IPR036806 YozE SAM-like superfamily DOE78_15385 277fe51e6a6a00fb1d513ccd845e12b1 71 Pfam PF06855 YozE SAM-like fold 4 69 2.3E-28 T 01-11-2018 IPR023089 YozE SAM-like domain DOE78_15385 277fe51e6a6a00fb1d513ccd845e12b1 71 PIRSF PIRSF037262 1 71 1.5E-34 T 01-11-2018 IPR010673 Protein of unknown function UPF0346 DOE78_15385 277fe51e6a6a00fb1d513ccd845e12b1 71 Gene3D G3DSA:1.10.150.260 2 71 2.5E-28 T 01-11-2018 IPR036806 YozE SAM-like superfamily DOE78_15385 277fe51e6a6a00fb1d513ccd845e12b1 71 Hamap MF_01538 UPF0346 protein . 1 71 24.866 T 01-11-2018 IPR010673 Protein of unknown function UPF0346 DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 SUPERFAMILY SSF46785 4 83 3.76E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 8.2E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 Gene3D G3DSA:1.10.10.10 7 75 7.9E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 Gene3D G3DSA:3.40.1410.10 76 242 1.1E-34 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 SUPERFAMILY SSF64288 62 239 2.2E-37 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 4.7E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 4.7E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 SMART SM00866 95 235 8.7E-21 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 Pfam PF07702 UTRA domain 96 234 4.3E-28 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_24355 02800d2e4be854a55c5f9b365d9a3b13 242 SMART SM00345 15 74 2.0E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_12210 f91fbae90faa4fc5f48263e35264c33d 563 Gene3D G3DSA:3.40.190.10 58 177 2.9E-12 T 01-11-2018 DOE78_12210 f91fbae90faa4fc5f48263e35264c33d 563 Gene3D G3DSA:3.40.190.10 178 411 1.2E-40 T 01-11-2018 DOE78_12210 f91fbae90faa4fc5f48263e35264c33d 563 SUPERFAMILY SSF53850 44 561 3.09E-63 T 01-11-2018 DOE78_12210 f91fbae90faa4fc5f48263e35264c33d 563 Pfam PF01547 Bacterial extracellular solute-binding protein 59 384 1.4E-13 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 SMART SM00357 3 66 1.1E-31 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 PIRSF PIRSF002599 1 66 9.0E-26 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 Gene3D G3DSA:2.40.50.140 1 65 1.1E-31 T 01-11-2018 DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 01-11-2018 IPR019844 Cold-shock conserved site DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 9.4E-31 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 SUPERFAMILY SSF50249 1 64 1.14E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 PRINTS PR00050 Cold shock protein signature 24 33 2.1E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 PRINTS PR00050 Cold shock protein signature 39 57 2.1E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15160 cc6ff211da24d81a73ec689c53be25c4 66 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 Gene3D G3DSA:3.30.190.20 21 225 7.9E-86 T 01-11-2018 DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 45.104 T 01-11-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 PIRSF PIRSF002155 1 227 4.6E-83 T 01-11-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 Gene3D G3DSA:3.40.50.790 68 159 7.9E-86 T 01-11-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 SUPERFAMILY SSF56808 6 226 8.76E-86 T 01-11-2018 IPR023674 Ribosomal protein L1-like DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 7.9E-57 T 01-11-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 01-11-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00645 2bbc7d87347b5400e9df85f328d89c3e 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.0E-108 T 01-11-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DOE78_17580 954b7e9fa1a918538247086e70b7324c 96 Gene3D G3DSA:3.30.110.60 1 96 6.7E-38 T 01-11-2018 IPR035920 YhbY-like superfamily DOE78_17580 954b7e9fa1a918538247086e70b7324c 96 SMART SM01103 2 85 2.5E-44 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DOE78_17580 954b7e9fa1a918538247086e70b7324c 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 1.0E-35 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DOE78_17580 954b7e9fa1a918538247086e70b7324c 96 SUPERFAMILY SSF75471 1 95 6.54E-32 T 01-11-2018 IPR035920 YhbY-like superfamily DOE78_17580 954b7e9fa1a918538247086e70b7324c 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 2.1E-22 T 01-11-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DOE78_17580 954b7e9fa1a918538247086e70b7324c 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 5.4E-42 T 01-11-2018 IPR017924 RNA-binding protein YhbY GO:0003723 DOE78_02560 52387830e5b912832af904fbe8c2b391 926 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 454 819 1.5E-109 T 01-11-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DOE78_02560 52387830e5b912832af904fbe8c2b391 926 Gene3D G3DSA:2.60.40.10 3 108 6.8E-32 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_02560 52387830e5b912832af904fbe8c2b391 926 SUPERFAMILY SSF48208 449 885 1.36E-45 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_02560 52387830e5b912832af904fbe8c2b391 926 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 349 448 4.2E-26 T 01-11-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain DOE78_02560 52387830e5b912832af904fbe8c2b391 926 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 821 886 6.0E-19 T 01-11-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain DOE78_02560 52387830e5b912832af904fbe8c2b391 926 PIRSF PIRSF010631 2 921 3.9E-277 T 01-11-2018 IPR016007 Alpha-L-rhamnosidase DOE78_02560 52387830e5b912832af904fbe8c2b391 926 SUPERFAMILY SSF49785 155 243 3.23E-5 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_02560 52387830e5b912832af904fbe8c2b391 926 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 169 338 1.5E-54 T 01-11-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal DOE78_02560 52387830e5b912832af904fbe8c2b391 926 Gene3D G3DSA:1.50.10.10 109 925 1.2E-275 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_08050 f747e66ddad2e55ae1abfc98a929ba65 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 01-11-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08050 f747e66ddad2e55ae1abfc98a929ba65 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.71 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08050 f747e66ddad2e55ae1abfc98a929ba65 90 Pfam PF00886 Ribosomal protein S16 9 67 7.4E-26 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08050 f747e66ddad2e55ae1abfc98a929ba65 90 Gene3D G3DSA:3.30.1320.10 1 90 1.2E-36 T 01-11-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08050 f747e66ddad2e55ae1abfc98a929ba65 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 9.1E-35 T 01-11-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08050 f747e66ddad2e55ae1abfc98a929ba65 90 SUPERFAMILY SSF54565 2 86 1.18E-34 T 01-11-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_07375 aba9979e8ae0b6240ad5840db27bfc07 42 Pfam PF13790 SR1 protein 1 36 3.3E-19 T 01-11-2018 IPR025236 SR1 protein DOE78_16930 7cf2ef36b1930a5467cf3780cd16e28f 131 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 29 129 3.4E-36 T 01-11-2018 IPR014211 Stage III sporulation protein AD DOE78_16930 7cf2ef36b1930a5467cf3780cd16e28f 131 Pfam PF06686 Stage III sporulation protein AC/AD protein family 73 126 1.6E-18 T 01-11-2018 IPR025664 Stage III sporulation protein AC/AD family DOE78_16930 7cf2ef36b1930a5467cf3780cd16e28f 131 Pfam PF06686 Stage III sporulation protein AC/AD protein family 5 59 2.6E-12 T 01-11-2018 IPR025664 Stage III sporulation protein AC/AD family DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 10 348 4.4E-164 T 01-11-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 SUPERFAMILY SSF55804 497 634 2.22E-39 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 542 558 - T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 Gene3D G3DSA:3.40.930.10 497 636 5.8E-44 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 Pfam PF02378 Phosphotransferase system, EIIC 19 278 3.1E-16 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 Gene3D G3DSA:3.40.50.2300 369 467 1.1E-36 T 01-11-2018 DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 SUPERFAMILY SSF52794 378 465 9.03E-26 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 1.5E-34 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_20160 423ee8c5d3ee66de5a6d3d36cc64063d 636 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 380 463 1.0E-11 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 Gene3D G3DSA:3.30.1370.10 208 310 6.6E-9 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 Gene3D G3DSA:1.10.3210.10 318 472 9.9E-19 T 01-11-2018 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 Pfam PF01966 HD domain 337 428 1.8E-18 T 01-11-2018 IPR006674 HD domain DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 Pfam PF12072 Domain of unknown function (DUF3552) 6 205 1.7E-79 T 01-11-2018 IPR022711 Ribonuclease Y, N-terminal DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 8 520 6.8E-248 T 01-11-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 SUPERFAMILY SSF54791 208 304 1.41E-16 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 SMART SM00322 208 275 1.3E-6 T 01-11-2018 IPR004087 K Homology domain GO:0003676 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 Pfam PF00013 KH domain 213 270 2.1E-6 T 01-11-2018 IPR004088 K Homology domain, type 1 GO:0003723 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 SMART SM00471 332 438 2.6E-13 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 SUPERFAMILY SSF109604 316 467 5.39E-30 T 01-11-2018 DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 TIGRFAM TIGR00277 HDIG: HDIG domain 332 409 2.6E-25 T 01-11-2018 IPR006675 HDIG domain DOE78_08560 fc5a64921605b78c16f0be21809b3966 520 Hamap MF_00335 Ribonuclease Y [rny]. 5 520 26.12 T 01-11-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 3 45 3.1E-11 T 01-11-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 Gene3D G3DSA:3.20.20.70 14 268 6.7E-25 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 SUPERFAMILY SSF102114 20 287 1.31E-64 T 01-11-2018 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 Pfam PF04055 Radical SAM superfamily 64 223 3.3E-14 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 Hamap MF_00206 Lipoyl synthase [lipA]. 1 295 147.689 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 PIRSF PIRSF005963 1 305 7.4E-137 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 SMART SM00729 57 265 8.6E-16 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_21075 7bb57e1c37f83d4aa2c76868ca6dc91f 305 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 293 3.9E-121 T 01-11-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DOE78_18195 e62f403d27157991ebe03e55dc81ad93 149 SUPERFAMILY SSF46785 12 147 2.3E-30 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_18195 e62f403d27157991ebe03e55dc81ad93 149 Pfam PF01047 MarR family 39 97 6.2E-18 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_18195 e62f403d27157991ebe03e55dc81ad93 149 SMART SM00347 32 132 1.0E-25 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_18195 e62f403d27157991ebe03e55dc81ad93 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.0E-8 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_18195 e62f403d27157991ebe03e55dc81ad93 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.0E-8 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_18195 e62f403d27157991ebe03e55dc81ad93 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.0E-8 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_18195 e62f403d27157991ebe03e55dc81ad93 149 Gene3D G3DSA:1.10.10.10 3 149 3.4E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_19395 715835cd524074cacd4e2772031722cf 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 6.2E-58 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 6.2E-58 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 6.2E-58 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 6.2E-58 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 6.2E-58 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 6.2E-58 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.2E-58 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Gene3D G3DSA:1.10.730.10 597 740 5.0E-48 T 01-11-2018 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 8.2E-69 T 01-11-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DOE78_19395 715835cd524074cacd4e2772031722cf 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Gene3D G3DSA:3.40.50.620 32 571 4.6E-276 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_19395 715835cd524074cacd4e2772031722cf 804 Gene3D G3DSA:3.90.740.10 226 410 4.6E-276 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DOE78_19395 715835cd524074cacd4e2772031722cf 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 803 0.0 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 SUPERFAMILY SSF47323 619 803 2.8E-39 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Gene3D G3DSA:3.10.20.590 744 803 9.2E-21 T 01-11-2018 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 803 23.264 T 01-11-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Gene3D G3DSA:2.30.210.10 572 587 4.6E-276 T 01-11-2018 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 604 2.8E-19 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_19395 715835cd524074cacd4e2772031722cf 804 SUPERFAMILY SSF52374 3 624 6.88E-144 T 01-11-2018 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 767 1.8E-21 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DOE78_19395 715835cd524074cacd4e2772031722cf 804 SUPERFAMILY SSF50677 224 410 8.48E-56 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DOE78_19395 715835cd524074cacd4e2772031722cf 804 Pfam PF09334 tRNA synthetases class I (M) 39 170 9.3E-16 T 01-11-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_17125 dc33b876e75ae89cb826f864e802865b 325 Pfam PF00480 ROK family 7 321 8.7E-80 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_17125 dc33b876e75ae89cb826f864e802865b 325 Gene3D G3DSA:3.30.420.40 7 318 6.5E-110 T 01-11-2018 DOE78_17125 dc33b876e75ae89cb826f864e802865b 325 ProSitePatterns PS01125 ROK family signature. 140 167 - T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_17125 dc33b876e75ae89cb826f864e802865b 325 SUPERFAMILY SSF53067 5 322 2.01E-74 T 01-11-2018 DOE78_17125 dc33b876e75ae89cb826f864e802865b 325 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 323 2.2E-119 T 01-11-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DOE78_17125 dc33b876e75ae89cb826f864e802865b 325 Gene3D G3DSA:3.30.420.40 131 305 6.5E-110 T 01-11-2018 DOE78_02950 30096f145c78485d1720be1c359e8705 50 Pfam PF08970 Sporulation inhibitor A 1 34 5.9E-12 T 01-11-2018 IPR015064 Sporulation inhibitor A DOE78_02950 30096f145c78485d1720be1c359e8705 50 Gene3D G3DSA:1.10.287.1100 1 28 1.1E-8 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_02950 30096f145c78485d1720be1c359e8705 50 SUPERFAMILY SSF100985 1 34 6.41E-9 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_17790 6c40141b7152774d7d23992c5d40fa93 170 Pfam PF00156 Phosphoribosyl transferase domain 32 148 3.6E-15 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_17790 6c40141b7152774d7d23992c5d40fa93 170 SUPERFAMILY SSF53271 2 163 7.1E-49 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_17790 6c40141b7152774d7d23992c5d40fa93 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 3.0E-70 T 01-11-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DOE78_17790 6c40141b7152774d7d23992c5d40fa93 170 Gene3D G3DSA:3.40.50.2020 1 170 3.0E-58 T 01-11-2018 DOE78_17790 6c40141b7152774d7d23992c5d40fa93 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.261 T 01-11-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DOE78_07715 2dbf681ead1ab10d2842df94669716e4 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 01-11-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07715 2dbf681ead1ab10d2842df94669716e4 366 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 10 363 6.6E-134 T 01-11-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07715 2dbf681ead1ab10d2842df94669716e4 366 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 2.2E-179 T 01-11-2018 IPR013438 Sporulation stage V, protein E DOE78_07715 2dbf681ead1ab10d2842df94669716e4 366 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 9 364 8.7E-103 T 01-11-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07715 2dbf681ead1ab10d2842df94669716e4 366 Pfam PF01098 Cell cycle protein 12 365 9.8E-129 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 Gene3D G3DSA:3.30.413.10 380 513 2.2E-20 T 01-11-2018 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 422 438 - T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 214 3.7E-36 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 247 3.5E-101 T 01-11-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 SUPERFAMILY SSF56014 387 501 7.33E-23 T 01-11-2018 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 Gene3D G3DSA:3.40.1010.10 1 117 5.6E-33 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 SUPERFAMILY SSF53790 2 255 6.94E-58 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 Gene3D G3DSA:3.30.950.10 118 248 3.9E-53 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DOE78_12790 2f047636f8da375fc520e9b886ab4f0c 525 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 385 500 3.6E-9 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_06210 9b39508afaf7dde9ea198f847ed91235 530 Gene3D G3DSA:3.40.50.12780 1 419 2.5E-124 T 01-11-2018 DOE78_06210 9b39508afaf7dde9ea198f847ed91235 530 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 508 1.5E-20 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_06210 9b39508afaf7dde9ea198f847ed91235 530 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_06210 9b39508afaf7dde9ea198f847ed91235 530 SUPERFAMILY SSF56801 5 520 1.57E-151 T 01-11-2018 DOE78_06210 9b39508afaf7dde9ea198f847ed91235 530 Pfam PF00501 AMP-binding enzyme 12 424 2.0E-107 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_06210 9b39508afaf7dde9ea198f847ed91235 530 Gene3D G3DSA:3.30.300.310 420 524 9.0E-35 T 01-11-2018 DOE78_23300 e7c9cf18ffd90f5e67f23c7d769b7a47 226 SUPERFAMILY SSF52540 41 213 3.93E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23300 e7c9cf18ffd90f5e67f23c7d769b7a47 226 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 22 223 5.8E-71 T 01-11-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 DOE78_23300 e7c9cf18ffd90f5e67f23c7d769b7a47 226 Gene3D G3DSA:3.40.50.300 2 226 1.5E-77 T 01-11-2018 DOE78_23300 e7c9cf18ffd90f5e67f23c7d769b7a47 226 Pfam PF13614 AAA domain 50 170 4.5E-15 T 01-11-2018 IPR025669 AAA domain DOE78_10670 ecc76f9af3ddc553926d2ba37510038b 467 Pfam PF07670 Nucleoside recognition 311 434 4.5E-14 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_10670 ecc76f9af3ddc553926d2ba37510038b 467 Pfam PF07670 Nucleoside recognition 139 227 1.0E-7 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_10670 ecc76f9af3ddc553926d2ba37510038b 467 Pfam PF07664 Ferrous iron transport protein B C terminus 251 299 3.5E-13 T 01-11-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 DOE78_13815 2dbe8c846792804811624b95b4555145 233 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 172 8.8E-60 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DOE78_13815 2dbe8c846792804811624b95b4555145 233 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 209 29.692 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DOE78_13815 2dbe8c846792804811624b95b4555145 233 Gene3D G3DSA:3.40.50.300 1 221 7.1E-60 T 01-11-2018 DOE78_13815 2dbe8c846792804811624b95b4555145 233 Pfam PF13500 AAA domain 3 206 1.2E-43 T 01-11-2018 DOE78_13815 2dbe8c846792804811624b95b4555145 233 PIRSF PIRSF006755 1 230 3.8E-72 T 01-11-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DOE78_13815 2dbe8c846792804811624b95b4555145 233 SUPERFAMILY SSF52540 1 212 5.79E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18560 1ae3b4ac2e3f6ca74e8dd25906dca758 148 Gene3D G3DSA:3.40.50.620 7 144 2.5E-41 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_18560 1ae3b4ac2e3f6ca74e8dd25906dca758 148 SUPERFAMILY SSF52402 5 144 1.32E-35 T 01-11-2018 DOE78_18560 1ae3b4ac2e3f6ca74e8dd25906dca758 148 Pfam PF00582 Universal stress protein family 5 144 2.9E-35 T 01-11-2018 IPR006016 UspA DOE78_18560 1ae3b4ac2e3f6ca74e8dd25906dca758 148 PRINTS PR01438 Universal stress protein signature 5 23 1.4E-19 T 01-11-2018 IPR006015 Universal stress protein A DOE78_18560 1ae3b4ac2e3f6ca74e8dd25906dca758 148 PRINTS PR01438 Universal stress protein signature 122 144 1.4E-19 T 01-11-2018 IPR006015 Universal stress protein A DOE78_18560 1ae3b4ac2e3f6ca74e8dd25906dca758 148 PRINTS PR01438 Universal stress protein signature 104 116 1.4E-19 T 01-11-2018 IPR006015 Universal stress protein A DOE78_18560 1ae3b4ac2e3f6ca74e8dd25906dca758 148 PIRSF PIRSF006276 1 147 8.8E-20 T 01-11-2018 IPR006015 Universal stress protein A DOE78_17715 433d11b45fc18e6d65bfa31c379f188c 159 SUPERFAMILY SSF50346 5 69 8.44E-7 T 01-11-2018 IPR011033 PRC-barrel-like superfamily DOE78_17715 433d11b45fc18e6d65bfa31c379f188c 159 Pfam PF05239 PRC-barrel domain 93 158 9.4E-6 T 01-11-2018 IPR027275 PRC-barrel domain DOE78_17715 433d11b45fc18e6d65bfa31c379f188c 159 Pfam PF05239 PRC-barrel domain 6 71 1.6E-6 T 01-11-2018 IPR027275 PRC-barrel domain DOE78_17715 433d11b45fc18e6d65bfa31c379f188c 159 SUPERFAMILY SSF50346 90 155 1.22E-6 T 01-11-2018 IPR011033 PRC-barrel-like superfamily DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Pfam PF00563 EAL domain 452 686 7.5E-74 T 01-11-2018 IPR001633 EAL domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SMART SM00267 265 436 2.0E-52 T 01-11-2018 IPR000160 GGDEF domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Pfam PF00989 PAS fold 153 262 1.6E-10 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SUPERFAMILY SSF55785 137 263 5.58E-20 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Gene3D G3DSA:3.30.450.20 146 263 1.0E-18 T 01-11-2018 DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Pfam PF08448 PAS fold 30 141 8.3E-15 T 01-11-2018 IPR013656 PAS fold-4 DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Gene3D G3DSA:3.30.450.20 15 145 1.3E-15 T 01-11-2018 DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 434 1.7E-37 T 01-11-2018 IPR000160 GGDEF domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SMART SM00091 24 92 89.0 T 01-11-2018 IPR000014 PAS domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SMART SM00091 152 218 4.2E-11 T 01-11-2018 IPR000014 PAS domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SUPERFAMILY SSF141868 451 699 3.14E-88 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 65 144 6.5E-6 T 01-11-2018 IPR000014 PAS domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 269 1.3E-18 T 01-11-2018 IPR000014 PAS domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 430 1.1E-41 T 01-11-2018 IPR000160 GGDEF domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Gene3D G3DSA:3.30.70.270 271 447 1.8E-52 T 01-11-2018 DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SUPERFAMILY SSF55785 29 140 3.32E-11 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SUPERFAMILY SSF55073 281 438 3.3E-42 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 Gene3D G3DSA:3.20.20.450 448 698 4.9E-98 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SMART SM00052 446 691 1.7E-114 T 01-11-2018 IPR001633 EAL domain DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SMART SM00086 98 140 1.2 T 01-11-2018 IPR001610 PAC motif DOE78_07220 cba0e53a48393948c0087b6f5ee921a3 703 SMART SM00086 224 265 0.002 T 01-11-2018 IPR001610 PAC motif DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 SMART SM00387 35 179 1.2E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 10 20 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 184 199 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 595 607 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 611 627 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 476 485 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 199 212 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 223 245 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 364 378 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR01159 DNA gyrase subunit B signature 378 398 1.4E-58 T 01-11-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 631 4.7E-30 T 01-11-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 SUPERFAMILY SSF55874 9 221 4.06E-68 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 177 8.4E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Gene3D G3DSA:3.40.50.670 412 644 3.8E-101 T 01-11-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Gene3D G3DSA:3.30.565.10 7 222 2.5E-86 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 39 54 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 492 508 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 270 283 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 426 440 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 510 527 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 116 130 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 74 87 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 574 590 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 PRINTS PR00418 DNA topoisomerase II family signature 530 542 2.0E-69 T 01-11-2018 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Gene3D G3DSA:3.30.230.10 223 404 2.3E-72 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 SMART SM00433 39 635 0.0 T 01-11-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 01-11-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 SUPERFAMILY SSF54211 224 394 7.97E-54 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 642 0.0 T 01-11-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Pfam PF00204 DNA gyrase B 224 394 3.3E-56 T 01-11-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Pfam PF01751 Toprim domain 425 534 1.4E-16 T 01-11-2018 IPR006171 TOPRIM domain DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 SUPERFAMILY SSF56719 400 635 7.06E-86 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DOE78_13545 f0f6aedeb62183b31b1681710522cdc0 658 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 8 640 48.212 T 01-11-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 SUPERFAMILY SSF46689 146 194 1.73E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 SUPERFAMILY SSF46689 197 250 1.61E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 Pfam PF12833 Helix-turn-helix domain 169 245 2.2E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 SMART SM00342 161 244 1.3E-29 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-17 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 3.4E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 3.4E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 SMART SM00448 2 116 1.9E-16 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 Gene3D G3DSA:1.10.10.60 195 249 1.0E-17 T 01-11-2018 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 SUPERFAMILY SSF52172 4 126 2.56E-26 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 Gene3D G3DSA:1.10.10.60 145 194 1.8E-19 T 01-11-2018 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 Gene3D G3DSA:3.40.50.2300 2 144 4.6E-25 T 01-11-2018 DOE78_11775 638cada1ef46a6ec361bd0f2034c4040 257 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_16610 0788fc7f8bc4fb2f530858897651cf75 468 Pfam PF00374 Nickel-dependent hydrogenase 128 323 4.6E-43 T 01-11-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DOE78_16610 0788fc7f8bc4fb2f530858897651cf75 468 Pfam PF00374 Nickel-dependent hydrogenase 39 120 3.3E-25 T 01-11-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DOE78_16610 0788fc7f8bc4fb2f530858897651cf75 468 Pfam PF00374 Nickel-dependent hydrogenase 328 454 2.2E-39 T 01-11-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 DOE78_16610 0788fc7f8bc4fb2f530858897651cf75 468 Gene3D G3DSA:1.10.645.10 1 468 1.2E-154 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_16610 0788fc7f8bc4fb2f530858897651cf75 468 SUPERFAMILY SSF56762 1 454 4.58E-118 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_16610 0788fc7f8bc4fb2f530858897651cf75 468 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 01-11-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 DOE78_16610 0788fc7f8bc4fb2f530858897651cf75 468 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 445 454 - T 01-11-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 DOE78_06810 f744faea309bf9d7acf37c7c29a37399 408 SUPERFAMILY SSF48452 131 355 4.88E-16 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_06810 f744faea309bf9d7acf37c7c29a37399 408 SMART SM00530 9 63 1.1E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_06810 f744faea309bf9d7acf37c7c29a37399 408 Pfam PF01381 Helix-turn-helix 10 60 1.5E-9 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_06810 f744faea309bf9d7acf37c7c29a37399 408 Pfam PF13181 Tetratricopeptide repeat 266 295 2.4E-6 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_06810 f744faea309bf9d7acf37c7c29a37399 408 Gene3D G3DSA:1.25.40.10 182 408 1.3E-29 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_06810 f744faea309bf9d7acf37c7c29a37399 408 SUPERFAMILY SSF47413 5 61 6.48E-13 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_06810 f744faea309bf9d7acf37c7c29a37399 408 Gene3D G3DSA:1.25.40.10 4 181 1.0E-18 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_16050 dbb8485441f40c985af4b718c7755922 368 Pfam PF01842 ACT domain 297 352 2.9E-7 T 01-11-2018 IPR002912 ACT domain DOE78_16050 dbb8485441f40c985af4b718c7755922 368 Gene3D G3DSA:3.30.70.260 296 364 3.8E-6 T 01-11-2018 DOE78_16050 dbb8485441f40c985af4b718c7755922 368 SUPERFAMILY SSF48179 175 283 1.81E-34 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_16050 dbb8485441f40c985af4b718c7755922 368 Gene3D G3DSA:3.40.50.720 2 180 1.9E-43 T 01-11-2018 DOE78_16050 dbb8485441f40c985af4b718c7755922 368 SUPERFAMILY SSF55021 291 359 2.1E-8 T 01-11-2018 DOE78_16050 dbb8485441f40c985af4b718c7755922 368 Pfam PF02153 Prephenate dehydrogenase 17 275 1.4E-74 T 01-11-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DOE78_16050 dbb8485441f40c985af4b718c7755922 368 Gene3D G3DSA:1.10.3660.10 182 295 2.8E-36 T 01-11-2018 DOE78_16050 dbb8485441f40c985af4b718c7755922 368 SUPERFAMILY SSF51735 4 171 3.95E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08235 ddaa6ec06849091dff0dde7fe7a4cda0 120 SUPERFAMILY SSF52172 4 119 1.99E-41 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_08235 ddaa6ec06849091dff0dde7fe7a4cda0 120 Gene3D G3DSA:3.40.50.2300 2 120 2.6E-41 T 01-11-2018 DOE78_08235 ddaa6ec06849091dff0dde7fe7a4cda0 120 Pfam PF00072 Response regulator receiver domain 5 115 4.7E-35 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08235 ddaa6ec06849091dff0dde7fe7a4cda0 120 SMART SM00448 3 115 1.1E-41 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03895 8aaa813219b6339103cbfc47e8868c96 456 PIRSF PIRSF018788 1 456 4.1E-210 T 01-11-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DOE78_03895 8aaa813219b6339103cbfc47e8868c96 456 Gene3D G3DSA:3.20.20.70 142 453 1.3E-145 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_03895 8aaa813219b6339103cbfc47e8868c96 456 Gene3D G3DSA:1.10.220.70 55 141 1.6E-30 T 01-11-2018 DOE78_03895 8aaa813219b6339103cbfc47e8868c96 456 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 1.8E-203 T 01-11-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DOE78_03895 8aaa813219b6339103cbfc47e8868c96 456 Gene3D G3DSA:2.30.170.30 1 54 6.6E-22 T 01-11-2018 DOE78_07505 3addfc2077653113ed6ec5196145f947 155 Gene3D G3DSA:1.20.120.80 2 140 3.6E-7 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07505 3addfc2077653113ed6ec5196145f947 155 Pfam PF04238 Protein of unknown function (DUF420) 8 136 2.0E-40 T 01-11-2018 IPR007352 Protein of unknown function DUF420 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 Gene3D G3DSA:3.30.499.20 4 285 8.7E-103 T 01-11-2018 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 1.5E-158 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 1.0E-243 T 01-11-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 SUPERFAMILY SSF53732 1 466 1.18E-166 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 Gene3D G3DSA:3.30.499.10 323 469 2.9E-50 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 285 299 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 398 411 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 118 131 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 81 94 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 194 207 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 208 221 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 107 115 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 132 147 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 PRINTS PR00415 Aconitase family signature 342 353 3.5E-47 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 59.1 T 01-11-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DOE78_18105 2b9b9f2ca7d74ba4b85ef142d604e2d6 470 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DOE78_08630 afbc44fd5eafdf13015e31ea75b3d346 331 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 292 2.8E-111 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DOE78_08630 afbc44fd5eafdf13015e31ea75b3d346 331 SUPERFAMILY SSF52540 8 152 4.13E-19 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08630 afbc44fd5eafdf13015e31ea75b3d346 331 Gene3D G3DSA:1.10.20.140 114 186 3.3E-105 T 01-11-2018 DOE78_08630 afbc44fd5eafdf13015e31ea75b3d346 331 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 311 29.938 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DOE78_08630 afbc44fd5eafdf13015e31ea75b3d346 331 Pfam PF01715 IPP transferase 40 284 1.4E-82 T 01-11-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DOE78_08630 afbc44fd5eafdf13015e31ea75b3d346 331 SUPERFAMILY SSF52540 6 291 1.93E-9 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08630 afbc44fd5eafdf13015e31ea75b3d346 331 Gene3D G3DSA:3.40.50.300 11 289 3.3E-105 T 01-11-2018 DOE78_24200 abee23b3a45d20e5ae5659450e3bca26 292 Gene3D G3DSA:3.40.190.100 119 225 8.0E-81 T 01-11-2018 DOE78_24200 abee23b3a45d20e5ae5659450e3bca26 292 Gene3D G3DSA:3.40.190.10 39 287 8.0E-81 T 01-11-2018 DOE78_24200 abee23b3a45d20e5ae5659450e3bca26 292 SUPERFAMILY SSF53850 35 288 3.08E-70 T 01-11-2018 DOE78_24200 abee23b3a45d20e5ae5659450e3bca26 292 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 38 280 1.3E-59 T 01-11-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DOE78_15810 382f77348ba29d4253ca19a08df4623a 636 SUPERFAMILY SSF52540 51 617 2.87E-19 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15810 382f77348ba29d4253ca19a08df4623a 636 SMART SM00491 504 616 2.1E-6 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DOE78_15810 382f77348ba29d4253ca19a08df4623a 636 Gene3D G3DSA:3.40.50.300 36 307 8.6E-31 T 01-11-2018 DOE78_15810 382f77348ba29d4253ca19a08df4623a 636 Gene3D G3DSA:3.40.50.300 461 625 1.1E-19 T 01-11-2018 DOE78_15810 382f77348ba29d4253ca19a08df4623a 636 Pfam PF13307 Helicase C-terminal domain 486 622 3.6E-20 T 01-11-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 2.9E-35 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 PIRSF PIRSF000089 1 323 1.6E-110 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 SUPERFAMILY SSF52402 4 191 5.65E-48 T 01-11-2018 DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 SMART SM00893 5 195 1.8E-47 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 Gene3D G3DSA:3.40.50.1220 195 325 1.0E-56 T 01-11-2018 DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 Gene3D G3DSA:3.40.50.620 1 194 1.7E-53 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 Pfam PF01012 Electron transfer flavoprotein domain 5 179 4.4E-44 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 SUPERFAMILY SSF52467 198 317 4.91E-48 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE78_18245 d97b2b30d3275c5c4ebef5f2bd8dd485 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 01-11-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 DOE78_18680 ba8199138dd7ff75030b0d121099a26a 160 SUPERFAMILY SSF55781 11 156 2.62E-44 T 01-11-2018 DOE78_18680 ba8199138dd7ff75030b0d121099a26a 160 Gene3D G3DSA:3.30.450.40 10 160 2.5E-65 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_18680 ba8199138dd7ff75030b0d121099a26a 160 Pfam PF13185 GAF domain 53 154 9.2E-13 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_18680 ba8199138dd7ff75030b0d121099a26a 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 99 116 - T 01-11-2018 IPR000614 Free Met sulfoxide reductase conserved site DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 634 1.2E-234 T 01-11-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 Pfam PF02378 Phosphotransferase system, EIIC 107 400 1.4E-32 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 Pfam PF00367 phosphotransferase system, EIIB 8 41 9.7E-15 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 555 567 - T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 SUPERFAMILY SSF51261 483 635 1.48E-55 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 Gene3D G3DSA:2.70.70.10 480 636 9.7E-57 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 Gene3D G3DSA:3.30.1360.60 1 77 1.6E-29 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 SUPERFAMILY SSF55604 6 78 3.66E-22 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 493 613 1.4E-45 T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DOE78_22305 5afcd6109a801a4a1851fe9eb8d52bc8 639 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 492 616 1.0E-51 T 01-11-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 Pfam PF17202 Single cache domain 3 83 185 2.9E-33 T 01-11-2018 IPR033463 Single cache domain 3 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 518 9.5E-52 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 21 46 1.1E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 417 1.1E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 1.1E-22 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 Pfam PF00672 HAMP domain 213 259 4.1E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 SMART SM00283 292 567 3.5E-80 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 Gene3D G3DSA:1.10.287.950 265 567 3.9E-72 T 01-11-2018 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 SUPERFAMILY SSF58104 231 567 1.83E-75 T 01-11-2018 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 Gene3D G3DSA:1.20.1480.50 175 264 1.4E-8 T 01-11-2018 DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 SUPERFAMILY SSF103190 75 186 3.14E-12 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_10610 8e028af278489dd4226cdc43d230ec0b 568 SMART SM00304 211 263 2.0E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_04500 67b74ebaccf02453a8615d8fc5128cb3 164 Gene3D G3DSA:3.10.350.10 1 47 6.1E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_04500 67b74ebaccf02453a8615d8fc5128cb3 164 SUPERFAMILY SSF141523 53 163 3.14E-36 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like DOE78_04500 67b74ebaccf02453a8615d8fc5128cb3 164 Pfam PF03734 L,D-transpeptidase catalytic domain 56 162 4.5E-21 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DOE78_04500 67b74ebaccf02453a8615d8fc5128cb3 164 SUPERFAMILY SSF54106 2 46 3.92E-11 T 01-11-2018 DOE78_04500 67b74ebaccf02453a8615d8fc5128cb3 164 SMART SM00257 2 46 6.0E-16 T 01-11-2018 IPR018392 LysM domain DOE78_04500 67b74ebaccf02453a8615d8fc5128cb3 164 Gene3D G3DSA:2.40.440.10 48 163 1.5E-44 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like DOE78_04500 67b74ebaccf02453a8615d8fc5128cb3 164 Pfam PF01476 LysM domain 3 46 1.8E-12 T 01-11-2018 IPR018392 LysM domain DOE78_06410 9094544cbca838c1bfd1c8925df131be 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 7.3E-27 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_06410 9094544cbca838c1bfd1c8925df131be 272 SUPERFAMILY SSF56784 3 267 2.38E-67 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_06410 9094544cbca838c1bfd1c8925df131be 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 262 2.0E-58 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_06410 9094544cbca838c1bfd1c8925df131be 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 263 2.9E-65 T 01-11-2018 DOE78_06410 9094544cbca838c1bfd1c8925df131be 272 Gene3D G3DSA:3.30.1240.10 86 191 4.0E-63 T 01-11-2018 DOE78_06410 9094544cbca838c1bfd1c8925df131be 272 Gene3D G3DSA:3.40.50.1000 6 260 4.0E-63 T 01-11-2018 IPR023214 HAD superfamily DOE78_16280 c889f144f8b0b5552fafda1c43747fc2 311 Pfam PF01368 DHH family 3 146 2.9E-31 T 01-11-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_16280 c889f144f8b0b5552fafda1c43747fc2 311 SMART SM01131 181 307 7.6E-50 T 01-11-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_16280 c889f144f8b0b5552fafda1c43747fc2 311 SUPERFAMILY SSF64182 1 306 2.09E-85 T 01-11-2018 IPR038763 DHH phosphoesterase superfamily DOE78_16280 c889f144f8b0b5552fafda1c43747fc2 311 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 46.542 T 01-11-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_16280 c889f144f8b0b5552fafda1c43747fc2 311 Pfam PF02833 DHHA2 domain 183 305 5.5E-20 T 01-11-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_16280 c889f144f8b0b5552fafda1c43747fc2 311 Gene3D G3DSA:3.90.1640.10 1 188 9.1E-81 T 01-11-2018 DOE78_16280 c889f144f8b0b5552fafda1c43747fc2 311 Gene3D G3DSA:3.10.310.20 190 311 4.7E-38 T 01-11-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_20070 b2b802daa6a8b8f74c7d3fab5131d426 327 SUPERFAMILY SSF75005 8 320 2.09E-64 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_20070 b2b802daa6a8b8f74c7d3fab5131d426 327 Pfam PF04616 Glycosyl hydrolases family 43 75 319 1.8E-33 T 01-11-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DOE78_20070 b2b802daa6a8b8f74c7d3fab5131d426 327 Gene3D G3DSA:2.115.10.20 1 325 2.9E-104 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 Gene3D G3DSA:3.60.20.10 4 225 6.5E-31 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 PIRSF PIRSF001589 1 619 8.8E-46 T 01-11-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 SUPERFAMILY SSF56235 1 226 3.86E-29 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 Pfam PF13537 Glutamine amidotransferase domain 58 165 2.1E-19 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 Gene3D G3DSA:3.40.50.620 230 387 1.1E-18 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 Gene3D G3DSA:3.40.50.620 469 607 2.8E-5 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 SUPERFAMILY SSF52402 223 561 2.22E-23 T 01-11-2018 DOE78_20575 cc07ff31c2813ef4f1a4d15798f0db97 645 Pfam PF00733 Asparagine synthase 246 559 1.8E-17 T 01-11-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 151 1.2E-10 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 412 8.7E-25 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 24 8.7E-25 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 308 337 8.7E-25 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 8.7E-25 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 Gene3D G3DSA:1.10.287.950 261 562 7.2E-71 T 01-11-2018 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 Gene3D G3DSA:1.20.1480.50 161 260 8.3E-14 T 01-11-2018 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 Pfam PF00672 HAMP domain 204 254 2.4E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 SUPERFAMILY SSF58104 226 562 1.44E-73 T 01-11-2018 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 513 1.9E-48 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 SMART SM00283 287 562 1.3E-83 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10045 d604e018c5bb2d88c20d1ea5f5cd085c 563 SMART SM00304 204 258 2.0E-13 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_17395 010392ec6482ac82360324def51eb85b 133 SUPERFAMILY SSF53927 4 131 1.01E-46 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 DOE78_17395 010392ec6482ac82360324def51eb85b 133 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 104 1.1E-15 T 01-11-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE78_17395 010392ec6482ac82360324def51eb85b 133 Gene3D G3DSA:3.40.140.10 1 133 1.8E-56 T 01-11-2018 DOE78_17395 010392ec6482ac82360324def51eb85b 133 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 131 7.8E-46 T 01-11-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 DOE78_04615 811e469ed646f096f912f94e69189d51 512 SUPERFAMILY SSF52540 4 219 2.48E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_04615 811e469ed646f096f912f94e69189d51 512 Pfam PF00005 ABC transporter 21 169 6.6E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04615 811e469ed646f096f912f94e69189d51 512 Gene3D G3DSA:3.40.50.300 2 233 1.2E-57 T 01-11-2018 DOE78_04615 811e469ed646f096f912f94e69189d51 512 Pfam PF00005 ABC transporter 272 428 1.1E-15 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04615 811e469ed646f096f912f94e69189d51 512 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_04615 811e469ed646f096f912f94e69189d51 512 Gene3D G3DSA:3.40.50.300 255 494 4.8E-37 T 01-11-2018 DOE78_04615 811e469ed646f096f912f94e69189d51 512 SMART SM00382 29 217 7.2E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04615 811e469ed646f096f912f94e69189d51 512 SMART SM00382 281 484 12.0 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04615 811e469ed646f096f912f94e69189d51 512 SUPERFAMILY SSF52540 249 484 1.28E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_04615 811e469ed646f096f912f94e69189d51 512 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 SUPERFAMILY SSF56235 3 551 7.52E-160 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 Gene3D G3DSA:1.10.246.130 257 363 2.7E-30 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 Pfam PF01019 Gamma-glutamyltranspeptidase 33 546 6.9E-144 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 18 543 2.7E-134 T 01-11-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 Gene3D G3DSA:3.60.20.40 364 551 1.5E-64 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 4.8E-29 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 241 257 4.8E-29 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 419 434 4.8E-29 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 289 4.8E-29 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 40 65 4.8E-29 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 154 4.8E-29 T 01-11-2018 DOE78_15690 d4e29a3774d53a8949ceeeb6242f445b 551 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 4.8E-29 T 01-11-2018 DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 Pfam PF16369 C-terminal of Glycosyl hydrolases family 43 381 484 1.7E-36 T 01-11-2018 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 Gene3D G3DSA:2.40.128.10 393 498 3.2E-37 T 01-11-2018 DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 Gene3D G3DSA:2.115.10.20 49 380 6.6E-115 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 Gene3D G3DSA:2.60.40.1080 499 574 2.8E-5 T 01-11-2018 DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 SUPERFAMILY SSF49899 580 782 4.95E-36 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 Pfam PF04616 Glycosyl hydrolases family 43 44 293 7.7E-34 T 01-11-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 632 780 1.6E-29 T 01-11-2018 DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 Gene3D G3DSA:2.60.120.200 575 783 4.7E-31 T 01-11-2018 DOE78_12930 46cf148795b279c8eca6579d03c8903f 784 SUPERFAMILY SSF75005 44 391 6.28E-61 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_19190 6ddd105f58395c7aa864251f8a1515dc 242 Gene3D G3DSA:3.30.1330.60 72 238 4.6E-48 T 01-11-2018 IPR036737 OmpA-like domain superfamily DOE78_19190 6ddd105f58395c7aa864251f8a1515dc 242 Pfam PF00691 OmpA family 124 223 2.9E-20 T 01-11-2018 IPR006665 OmpA-like domain DOE78_19190 6ddd105f58395c7aa864251f8a1515dc 242 SUPERFAMILY SSF103088 112 229 4.84E-33 T 01-11-2018 IPR036737 OmpA-like domain superfamily DOE78_19190 6ddd105f58395c7aa864251f8a1515dc 242 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 55 1.5E-19 T 01-11-2018 IPR025713 Motility protein B, N-terminal domain DOE78_18410 a825b78168f276bce3b9d731473a7007 275 SUPERFAMILY SSF46946 134 226 7.72E-30 T 01-11-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 116 1.6E-29 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 248 272 - T 01-11-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 Pfam PF06827 Zinc finger found in FPG and IleRS 245 273 7.9E-9 T 01-11-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 272 1.5E-107 T 01-11-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 SMART SM00898 2 117 1.0E-44 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 SMART SM01232 133 225 1.9E-47 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 Gene3D G3DSA:1.10.8.50 135 274 2.2E-49 T 01-11-2018 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 273 43.755 T 01-11-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 SUPERFAMILY SSF81624 2 138 2.35E-39 T 01-11-2018 IPR035937 MutM-like, N-terminal DOE78_18410 a825b78168f276bce3b9d731473a7007 275 Gene3D G3DSA:3.20.190.10 2 128 1.9E-37 T 01-11-2018 IPR035937 MutM-like, N-terminal DOE78_18410 a825b78168f276bce3b9d731473a7007 275 SUPERFAMILY SSF57716 222 273 1.28E-17 T 01-11-2018 DOE78_18410 a825b78168f276bce3b9d731473a7007 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 133 222 3.5E-32 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DOE78_11195 cdf780008c1c32be58cf508770764b04 212 Gene3D G3DSA:2.60.120.200 17 208 2.9E-51 T 01-11-2018 DOE78_11195 cdf780008c1c32be58cf508770764b04 212 Pfam PF07081 Protein of unknown function (DUF1349) 22 202 1.5E-54 T 01-11-2018 IPR009784 Protein of unknown function DUF1349 DOE78_11195 cdf780008c1c32be58cf508770764b04 212 PIRSF PIRSF022704 10 210 1.5E-53 T 01-11-2018 IPR015987 Uncharacterised conserved protein UCP022704 DOE78_11195 cdf780008c1c32be58cf508770764b04 212 SUPERFAMILY SSF49899 9 202 3.09E-29 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_01230 14fbf1a29a8e83d92b007a4743c4fbd3 185 SMART SM01207 8 185 1.5E-50 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DOE78_01230 14fbf1a29a8e83d92b007a4743c4fbd3 185 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 182 14.791 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DOE78_01230 14fbf1a29a8e83d92b007a4743c4fbd3 185 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 182 1.4E-39 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DOE78_24030 cfb2adc18a217463d9865ef6e869506a 208 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 191 22.946 T 01-11-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DOE78_24030 cfb2adc18a217463d9865ef6e869506a 208 Pfam PF12804 MobA-like NTP transferase domain 5 149 1.9E-33 T 01-11-2018 IPR025877 MobA-like NTP transferase DOE78_24030 cfb2adc18a217463d9865ef6e869506a 208 Gene3D G3DSA:3.90.550.10 2 197 1.8E-53 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_24030 cfb2adc18a217463d9865ef6e869506a 208 SUPERFAMILY SSF53448 3 147 1.53E-27 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_05440 e5b8d4e1bcfd1027b226af348f44a361 221 Pfam PF13460 NAD(P)H-binding 10 132 3.7E-9 T 01-11-2018 IPR016040 NAD(P)-binding domain DOE78_05440 e5b8d4e1bcfd1027b226af348f44a361 221 SUPERFAMILY SSF51735 1 206 2.1E-36 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_05440 e5b8d4e1bcfd1027b226af348f44a361 221 Gene3D G3DSA:3.40.50.720 1 219 6.3E-56 T 01-11-2018 DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 PRINTS PR00723 Subtilisin serine protease family (S8) signature 266 282 1.4E-13 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 PRINTS PR00723 Subtilisin serine protease family (S8) signature 75 94 1.4E-13 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 PRINTS PR00723 Subtilisin serine protease family (S8) signature 113 126 1.4E-13 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 SUPERFAMILY SSF52743 61 319 2.36E-66 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 Pfam PF00082 Subtilase family 76 315 2.5E-40 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 80 91 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 117 127 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_23395 4e2dc27ed16da25bd636b52359d21539 322 Gene3D G3DSA:3.40.50.200 45 320 2.9E-70 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_15720 f366e3047d763e8271aed40725f5001a 219 SUPERFAMILY SSF53098 74 209 6.07E-19 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_15720 f366e3047d763e8271aed40725f5001a 219 Pfam PF13456 Reverse transcriptase-like 79 206 1.8E-14 T 01-11-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DOE78_15720 f366e3047d763e8271aed40725f5001a 219 Gene3D G3DSA:3.30.420.10 75 218 4.1E-29 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 SUPERFAMILY SSF54373 180 276 7.06E-41 T 01-11-2018 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 Pfam PF01494 FAD binding domain 2 344 6.4E-82 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 392 8.7E-170 T 01-11-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 5.1E-26 T 01-11-2018 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 5.1E-26 T 01-11-2018 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 5.1E-26 T 01-11-2018 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 5.1E-26 T 01-11-2018 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 SUPERFAMILY SSF51905 1 392 4.26E-54 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 Gene3D G3DSA:3.30.9.10 73 389 1.3E-171 T 01-11-2018 DOE78_09250 e77416783e0fc064ab0dec3cfa12e5c1 405 Gene3D G3DSA:3.50.50.60 2 353 1.3E-171 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_16490 2dc18903bfb463102e9fd908cd108a2d 302 Gene3D G3DSA:3.20.20.100 1 294 1.7E-100 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_16490 2dc18903bfb463102e9fd908cd108a2d 302 SUPERFAMILY SSF51430 1 296 6.68E-77 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_16490 2dc18903bfb463102e9fd908cd108a2d 302 PRINTS PR00069 Aldo-keto reductase signature 103 121 1.9E-6 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_16490 2dc18903bfb463102e9fd908cd108a2d 302 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.9E-6 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_16490 2dc18903bfb463102e9fd908cd108a2d 302 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.9E-6 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_16490 2dc18903bfb463102e9fd908cd108a2d 302 Pfam PF00248 Aldo/keto reductase family 15 292 1.7E-61 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain DOE78_09305 51b5cbf4778a081266efe135b06bd7c4 343 Gene3D G3DSA:3.40.190.150 42 334 3.3E-75 T 01-11-2018 DOE78_09305 51b5cbf4778a081266efe135b06bd7c4 343 PIRSF PIRSF017082 4 343 1.1E-101 T 01-11-2018 IPR005064 Bordetella uptake gene GO:0030288 DOE78_09305 51b5cbf4778a081266efe135b06bd7c4 343 Gene3D G3DSA:3.40.190.10 142 269 3.3E-75 T 01-11-2018 DOE78_09305 51b5cbf4778a081266efe135b06bd7c4 343 SUPERFAMILY SSF53850 53 248 4.98E-10 T 01-11-2018 DOE78_09305 51b5cbf4778a081266efe135b06bd7c4 343 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 72 340 1.4E-33 T 01-11-2018 IPR005064 Bordetella uptake gene GO:0030288 DOE78_24135 76d7eb5533f4e0a53d94978b849bfe4b 109 SMART SM00422 13 81 1.3E-19 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_24135 76d7eb5533f4e0a53d94978b849bfe4b 109 Pfam PF13411 MerR HTH family regulatory protein 14 76 5.7E-15 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_24135 76d7eb5533f4e0a53d94978b849bfe4b 109 SUPERFAMILY SSF46955 14 80 4.26E-17 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_24135 76d7eb5533f4e0a53d94978b849bfe4b 109 Gene3D G3DSA:1.10.1660.10 5 87 2.1E-21 T 01-11-2018 DOE78_16195 77e016431d2ebbca63f70c4e77f82840 312 Pfam PF01471 Putative peptidoglycan binding domain 8 63 8.8E-16 T 01-11-2018 IPR002477 Peptidoglycan binding-like DOE78_16195 77e016431d2ebbca63f70c4e77f82840 312 Gene3D G3DSA:2.40.10.420 277 312 4.4E-22 T 01-11-2018 DOE78_16195 77e016431d2ebbca63f70c4e77f82840 312 Gene3D G3DSA:1.10.101.10 1 74 7.8E-20 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DOE78_16195 77e016431d2ebbca63f70c4e77f82840 312 SUPERFAMILY SSF47090 2 64 4.24E-19 T 01-11-2018 IPR036365 PGBD-like superfamily DOE78_16195 77e016431d2ebbca63f70c4e77f82840 312 Gene3D G3DSA:1.10.10.2520 197 276 3.7E-32 T 01-11-2018 DOE78_16195 77e016431d2ebbca63f70c4e77f82840 312 Pfam PF07486 Cell Wall Hydrolase 213 311 5.3E-28 T 01-11-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DOE78_16195 77e016431d2ebbca63f70c4e77f82840 312 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 1 312 2.7E-97 T 01-11-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 DOE78_04670 797351cabfc8e571b7a466b331bdf41c 276 Pfam PF04962 KduI/IolB family 66 268 1.9E-30 T 01-11-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DOE78_04670 797351cabfc8e571b7a466b331bdf41c 276 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 276 53.692 T 01-11-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DOE78_04670 797351cabfc8e571b7a466b331bdf41c 276 PIRSF PIRSF006625 1 276 5.2E-130 T 01-11-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DOE78_04670 797351cabfc8e571b7a466b331bdf41c 276 Gene3D G3DSA:2.60.120.520 30 142 2.0E-117 T 01-11-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DOE78_04670 797351cabfc8e571b7a466b331bdf41c 276 SUPERFAMILY SSF51182 1 260 9.23E-103 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_04670 797351cabfc8e571b7a466b331bdf41c 276 Gene3D G3DSA:2.60.120.10 10 262 2.0E-117 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_06120 a927cc33124ac11acae1f129e15337c5 78 Pfam PF08858 IDEAL domain 33 69 1.7E-12 T 01-11-2018 IPR014957 IDEAL domain DOE78_06120 a927cc33124ac11acae1f129e15337c5 78 SMART SM00914 33 69 5.3E-7 T 01-11-2018 IPR014957 IDEAL domain DOE78_06120 a927cc33124ac11acae1f129e15337c5 78 Gene3D G3DSA:4.10.810.10 17 77 1.3E-12 T 01-11-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 Gene3D G3DSA:3.40.228.10 156 355 1.2E-165 T 01-11-2018 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 Pfam PF00384 Molybdopterin oxidoreductase 78 503 5.9E-98 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 SMART SM00926 19 75 4.1E-6 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 19 72 6.3E-10 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 Pfam PF01568 Molydopterin dinucleotide binding domain 597 702 9.2E-28 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 PIRSF PIRSF000144 71 663 8.4E-40 T 01-11-2018 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 Gene3D G3DSA:3.40.50.740 83 552 1.2E-165 T 01-11-2018 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 449 466 - T 01-11-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 SUPERFAMILY SSF53706 18 581 1.96E-179 T 01-11-2018 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 Gene3D G3DSA:2.20.25.90 20 74 6.9E-7 T 01-11-2018 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 Gene3D G3DSA:2.40.40.20 594 709 9.1E-35 T 01-11-2018 DOE78_05000 af12f3d5057367d49b1ea74987a72571 714 SUPERFAMILY SSF50692 567 707 2.1E-34 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DOE78_07400 30237aa9cf1019863bde272d447cc168 268 SUPERFAMILY SSF56655 12 260 1.83E-76 T 01-11-2018 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 Gene3D G3DSA:3.40.190.80 147 267 5.9E-34 T 01-11-2018 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 Pfam PF00459 Inositol monophosphatase family 8 262 1.3E-67 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 3.5E-40 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 3.5E-40 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 3.5E-40 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 3.5E-40 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 3.5E-40 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 3.5E-40 T 01-11-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 Gene3D G3DSA:3.30.540.10 8 145 4.1E-45 T 01-11-2018 DOE78_07400 30237aa9cf1019863bde272d447cc168 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 01-11-2018 IPR020583 Inositol monophosphatase, metal-binding site DOE78_07400 30237aa9cf1019863bde272d447cc168 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 01-11-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DOE78_00090 f5e1695668d6e896b5b25994988ab362 192 Gene3D G3DSA:3.40.50.880 1 192 1.0E-68 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_00090 f5e1695668d6e896b5b25994988ab362 192 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 36.641 T 01-11-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00090 f5e1695668d6e896b5b25994988ab362 192 SUPERFAMILY SSF52317 2 188 1.38E-51 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_00090 f5e1695668d6e896b5b25994988ab362 192 PIRSF PIRSF005639 1 191 3.4E-73 T 01-11-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00090 f5e1695668d6e896b5b25994988ab362 192 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 3 185 2.0E-81 T 01-11-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00090 f5e1695668d6e896b5b25994988ab362 192 Pfam PF01174 SNO glutamine amidotransferase family 6 188 3.4E-71 T 01-11-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_18100 142d67eb671c11050c8f3e637d37e06c 196 SUPERFAMILY SSF52016 2 190 9.03E-58 T 01-11-2018 DOE78_18100 142d67eb671c11050c8f3e637d37e06c 196 Gene3D G3DSA:3.20.19.10 1 172 3.1E-70 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DOE78_18100 142d67eb671c11050c8f3e637d37e06c 196 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 2 184 4.3E-84 T 01-11-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DOE78_18100 142d67eb671c11050c8f3e637d37e06c 196 Pfam PF00694 Aconitase C-terminal domain 2 121 3.7E-34 T 01-11-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DOE78_18100 142d67eb671c11050c8f3e637d37e06c 196 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 195 39.061 T 01-11-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.3E-24 T 01-11-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 SUPERFAMILY SSF55021 347 420 1.89E-10 T 01-11-2018 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 Gene3D G3DSA:3.30.70.260 344 416 6.2E-148 T 01-11-2018 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 01-11-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 PIRSF PIRSF000098 1 429 2.4E-169 T 01-11-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 Gene3D G3DSA:3.40.50.720 4 340 6.2E-148 T 01-11-2018 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 Pfam PF00742 Homoserine dehydrogenase 137 315 3.6E-64 T 01-11-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 SUPERFAMILY SSF51735 1 158 1.33E-32 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 SUPERFAMILY SSF55347 137 302 6.28E-52 T 01-11-2018 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 Gene3D G3DSA:3.30.360.10 136 343 6.2E-148 T 01-11-2018 DOE78_21025 e316bc5b5b8a6a707f43074bd05dfca7 430 Pfam PF01842 ACT domain 350 415 1.3E-9 T 01-11-2018 IPR002912 ACT domain DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 SUPERFAMILY SSF52009 387 509 5.62E-37 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 PIRSF PIRSF000853 1 884 0.0 T 01-11-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 65 294 1.4E-37 T 01-11-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 302 355 2.0E-10 T 01-11-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 60 8.3E-11 T 01-11-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Pfam PF00391 PEP-utilising enzyme, mobile domain 419 500 6.0E-26 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Gene3D G3DSA:3.30.1490.20 10 242 1.1E-101 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Gene3D G3DSA:3.50.30.10 382 506 2.1E-77 T 01-11-2018 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 447 458 - T 01-11-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Gene3D G3DSA:3.20.20.60 529 876 2.7E-147 T 01-11-2018 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Gene3D G3DSA:1.10.189.10 344 526 2.1E-77 T 01-11-2018 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 876 0.0 T 01-11-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 SUPERFAMILY SSF51621 508 876 6.57E-124 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 515 874 8.0E-92 T 01-11-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Gene3D G3DSA:1.20.80.30 110 197 1.1E-101 T 01-11-2018 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 SUPERFAMILY SSF56059 1 378 1.77E-147 T 01-11-2018 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 Gene3D G3DSA:3.30.470.20 243 340 4.1E-42 T 01-11-2018 DOE78_19930 c1f691d750fd53b4f30136da5d1194e2 889 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 765 783 - T 01-11-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 SUPERFAMILY SSF63520 170 273 7.19E-23 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 SUPERFAMILY SSF50151 1 53 2.35E-16 T 01-11-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 SMART SM01061 1 58 3.1E-26 T 01-11-2018 IPR004341 CAT RNA-binding domain GO:0003723 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 Pfam PF03123 CAT RNA binding domain 1 55 6.1E-21 T 01-11-2018 IPR004341 CAT RNA-binding domain GO:0003723 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 SUPERFAMILY SSF63520 54 165 1.7E-30 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 01-11-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 Gene3D G3DSA:1.10.1790.10 168 277 1.9E-27 T 01-11-2018 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 Gene3D G3DSA:1.10.1790.10 64 165 4.2E-32 T 01-11-2018 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 Pfam PF00874 PRD domain 74 161 2.4E-25 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 Pfam PF00874 PRD domain 180 272 5.6E-19 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_02425 11008feeda3874e521a50d647616f9f7 281 Gene3D G3DSA:2.30.24.10 1 55 6.1E-23 T 01-11-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 Gene3D G3DSA:3.40.50.12740 8 163 3.0E-36 T 01-11-2018 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 Gene3D G3DSA:1.10.10.60 399 450 3.6E-19 T 01-11-2018 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 SMART SM00342 417 500 1.5E-31 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 SUPERFAMILY SSF46689 402 451 3.85E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 469 484 4.0E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 484 500 4.0E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 SUPERFAMILY SSF46689 453 503 1.21E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 SMART SM00448 7 121 3.2E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 Pfam PF00072 Response regulator receiver domain 9 119 5.9E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 454 496 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 SUPERFAMILY SSF52172 8 143 3.27E-35 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 Gene3D G3DSA:1.10.10.60 451 504 7.4E-19 T 01-11-2018 DOE78_13965 069482e3b8034f8f4704f35bebd00267 506 Pfam PF12833 Helix-turn-helix domain 424 501 5.6E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_06065 2364b39830af984b2be5b7ed7ca9bde3 328 Gene3D G3DSA:3.90.25.10 172 305 1.9E-130 T 01-11-2018 DOE78_06065 2364b39830af984b2be5b7ed7ca9bde3 328 Gene3D G3DSA:3.40.50.720 3 251 1.9E-130 T 01-11-2018 DOE78_06065 2364b39830af984b2be5b7ed7ca9bde3 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 3.0E-59 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_06065 2364b39830af984b2be5b7ed7ca9bde3 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 325 2.6E-138 T 01-11-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DOE78_06065 2364b39830af984b2be5b7ed7ca9bde3 328 SUPERFAMILY SSF51735 1 327 4.23E-97 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13470 4f50ddf8a821155d3ae555b423a2780f 168 Pfam PF00578 AhpC/TSA family 36 150 1.8E-39 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_13470 4f50ddf8a821155d3ae555b423a2780f 168 Gene3D G3DSA:3.40.30.10 15 168 1.6E-49 T 01-11-2018 DOE78_13470 4f50ddf8a821155d3ae555b423a2780f 168 SUPERFAMILY SSF52833 32 166 7.58E-46 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_13470 4f50ddf8a821155d3ae555b423a2780f 168 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DOE78_18815 90cd47e84602c58cdc7a96a111f3463e 916 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 54 404 4.1E-53 T 01-11-2018 IPR010090 Phage tail tape measure protein DOE78_18815 90cd47e84602c58cdc7a96a111f3463e 916 Pfam PF10145 Phage-related minor tail protein 94 300 1.7E-46 T 01-11-2018 IPR010090 Phage tail tape measure protein DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 Pfam PF00072 Response regulator receiver domain 19 130 1.7E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 Gene3D G3DSA:1.10.10.2730 477 523 1.0E-18 T 01-11-2018 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 SMART SM00448 16 130 2.1E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 Pfam PF12833 Helix-turn-helix domain 448 523 8.4E-18 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 SMART SM00342 439 522 7.0E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 Gene3D G3DSA:3.40.50.12740 17 170 3.0E-32 T 01-11-2018 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 Gene3D G3DSA:1.10.10.60 420 476 3.1E-12 T 01-11-2018 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 491 506 8.8E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 506 522 8.8E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 SUPERFAMILY SSF46689 475 525 1.12E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_03615 67526dde325dfe42eaf505b89cb4f617 528 SUPERFAMILY SSF52172 15 148 4.55E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_23760 9349f464754a763f741bcdb279339c19 143 SUPERFAMILY SSF52788 1 142 1.1E-36 T 01-11-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DOE78_23760 9349f464754a763f741bcdb279339c19 143 SMART SM00226 2 141 1.7E-29 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I DOE78_23760 9349f464754a763f741bcdb279339c19 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 5.7E-10 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DOE78_23760 9349f464754a763f741bcdb279339c19 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 74 89 5.7E-10 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DOE78_23760 9349f464754a763f741bcdb279339c19 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 5.7E-10 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DOE78_23760 9349f464754a763f741bcdb279339c19 143 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 140 5.1E-28 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I DOE78_23760 9349f464754a763f741bcdb279339c19 143 Gene3D G3DSA:3.40.50.2300 1 143 1.4E-52 T 01-11-2018 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 SUPERFAMILY SSF52540 468 742 4.34E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Gene3D G3DSA:1.10.150.20 94 159 1.9E-5 T 01-11-2018 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Gene3D G3DSA:3.40.50.300 516 745 2.8E-143 T 01-11-2018 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 14 758 29.399 T 01-11-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Gene3D G3DSA:2.30.30.940 602 682 2.8E-143 T 01-11-2018 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Pfam PF14490 Helix-hairpin-helix containing domain 158 249 1.8E-30 T 01-11-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain DOE78_17720 17182270b50595fd2ebe151821deadf8 798 SMART SM00382 358 512 0.0014 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_17720 17182270b50595fd2ebe151821deadf8 798 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 24 754 5.3E-257 T 01-11-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Gene3D G3DSA:1.10.10.2220 200 295 3.7E-13 T 01-11-2018 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Gene3D G3DSA:3.40.50.300 337 751 2.8E-143 T 01-11-2018 DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Pfam PF13538 UvrD-like helicase C-terminal domain 681 729 4.9E-17 T 01-11-2018 IPR027785 UvrD-like helicase C-terminal domain DOE78_17720 17182270b50595fd2ebe151821deadf8 798 SUPERFAMILY SSF52540 197 516 1.88E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17720 17182270b50595fd2ebe151821deadf8 798 Pfam PF13604 AAA domain 345 551 1.1E-49 T 01-11-2018 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 ProSitePatterns PS00902 Glutamate 5-kinase signature. 208 225 - T 01-11-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 PIRSF PIRSF000729 1 370 1.2E-139 T 01-11-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 Hamap MF_00456 Glutamate 5-kinase [proB]. 6 268 37.101 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 Pfam PF01472 PUA domain 279 348 6.2E-21 T 01-11-2018 IPR002478 PUA domain GO:0003723 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 SUPERFAMILY SSF88697 279 368 6.46E-20 T 01-11-2018 IPR015947 PUA-like superfamily DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 Gene3D G3DSA:3.40.1160.10 3 259 1.6E-82 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 SUPERFAMILY SSF53633 6 256 1.31E-67 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 Pfam PF00696 Amino acid kinase family 6 235 1.2E-43 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 PRINTS PR00474 Glutamate 5-kinase family signature 210 230 5.7E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 PRINTS PR00474 Glutamate 5-kinase family signature 43 57 5.7E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 PRINTS PR00474 Glutamate 5-kinase family signature 77 105 5.7E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 PRINTS PR00474 Glutamate 5-kinase family signature 117 138 5.7E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 PRINTS PR00474 Glutamate 5-kinase family signature 149 176 5.7E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 SMART SM00359 279 365 2.0E-16 T 01-11-2018 IPR002478 PUA domain GO:0003723 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 367 2.4E-140 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24420 0464ea6c176ef511857a7ff4c3c8766f 376 Gene3D G3DSA:2.30.130.10 268 368 1.0E-28 T 01-11-2018 IPR036974 PUA domain superfamily GO:0003723 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 Gene3D G3DSA:3.30.1490.20 146 218 4.2E-30 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 SUPERFAMILY SSF56059 131 348 1.64E-64 T 01-11-2018 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 Gene3D G3DSA:3.30.470.20 219 357 5.4E-54 T 01-11-2018 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 98 109 - T 01-11-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 Pfam PF07478 D-ala D-ala ligase C-terminus 139 341 7.0E-84 T 01-11-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 343 7.8E-117 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 PIRSF PIRSF039102 1 352 3.5E-116 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 Gene3D G3DSA:3.40.50.20 1 141 2.5E-35 T 01-11-2018 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 344 42.452 T 01-11-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 SUPERFAMILY SSF52440 1 130 1.63E-35 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 286 314 - T 01-11-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_01275 eda9f71e7d672b533bf09b4c0717b1b9 357 Pfam PF01820 D-ala D-ala ligase N-terminus 4 120 2.4E-28 T 01-11-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_10630 2e1c565fa139fb2bf4ab7e6c0baed4d7 218 SUPERFAMILY SSF51206 25 140 3.4E-27 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_10630 2e1c565fa139fb2bf4ab7e6c0baed4d7 218 Pfam PF00027 Cyclic nucleotide-binding domain 34 115 6.7E-17 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_10630 2e1c565fa139fb2bf4ab7e6c0baed4d7 218 SUPERFAMILY SSF46785 151 217 2.21E-6 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10630 2e1c565fa139fb2bf4ab7e6c0baed4d7 218 SMART SM00100 14 135 6.7E-10 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_10630 2e1c565fa139fb2bf4ab7e6c0baed4d7 218 Gene3D G3DSA:2.60.120.10 25 144 2.9E-21 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_10630 2e1c565fa139fb2bf4ab7e6c0baed4d7 218 Gene3D G3DSA:1.10.10.10 150 218 4.2E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14615 4538a7628b12fb264a4a5668cee26b1e 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 193 207 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_14615 4538a7628b12fb264a4a5668cee26b1e 395 SUPERFAMILY SSF53383 12 384 7.01E-115 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_14615 4538a7628b12fb264a4a5668cee26b1e 395 Gene3D G3DSA:3.40.640.10 1 251 2.8E-91 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_14615 4538a7628b12fb264a4a5668cee26b1e 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 383 4.7E-148 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_14615 4538a7628b12fb264a4a5668cee26b1e 395 PIRSF PIRSF001434 1 386 1.0E-144 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_14615 4538a7628b12fb264a4a5668cee26b1e 395 Gene3D G3DSA:3.90.1150.10 252 387 3.1E-46 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_02295 a985dfcec99a47f18489c7048cf2006c 311 Gene3D G3DSA:3.40.50.1110 90 299 2.1E-37 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_02295 a985dfcec99a47f18489c7048cf2006c 311 SUPERFAMILY SSF52266 90 299 6.2E-39 T 01-11-2018 DOE78_02295 a985dfcec99a47f18489c7048cf2006c 311 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 98 287 1.7E-28 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 Gene3D G3DSA:3.40.50.300 283 555 2.6E-116 T 01-11-2018 DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 SUPERFAMILY SSF52540 168 553 1.34E-100 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 Gene3D G3DSA:3.30.300.160 66 143 4.2E-17 T 01-11-2018 DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 SMART SM00382 308 434 0.0011 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 SUPERFAMILY SSF160246 3 143 3.53E-42 T 01-11-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 147 7.6E-24 T 01-11-2018 IPR007831 General secretory system II, protein E, N-terminal DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 375 389 - T 01-11-2018 IPR001482 Type II/IV secretion system protein DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 Gene3D G3DSA:3.30.450.90 144 280 1.6E-48 T 01-11-2018 DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 Pfam PF00437 Type II/IV secretion system protein 182 447 1.2E-85 T 01-11-2018 IPR001482 Type II/IV secretion system protein DOE78_24245 f6b859a17870bb33f4255c0269f13738 555 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 83 553 2.8E-190 T 01-11-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 DOE78_05390 890385c7b9ef854a3c62940149d22ccb 222 Gene3D G3DSA:3.50.40.10 73 184 2.3E-7 T 01-11-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DOE78_05390 890385c7b9ef854a3c62940149d22ccb 222 SMART SM00873 62 212 6.6E-7 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DOE78_05390 890385c7b9ef854a3c62940149d22ccb 222 Pfam PF03483 B3/4 domain 64 182 5.4E-17 T 01-11-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DOE78_05390 890385c7b9ef854a3c62940149d22ccb 222 SUPERFAMILY SSF56037 56 214 1.33E-27 T 01-11-2018 DOE78_16320 af14d571c532111c18f0f67fe537aba8 395 Pfam PF01578 Cytochrome C assembly protein 74 193 1.0E-8 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DOE78_16320 af14d571c532111c18f0f67fe537aba8 395 Pfam PF01578 Cytochrome C assembly protein 268 390 1.1E-26 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DOE78_16320 af14d571c532111c18f0f67fe537aba8 395 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 51 393 2.1E-77 T 01-11-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 DOE78_08000 0b4d6ab7f339645a5a3f8637a1b05bc1 187 Gene3D G3DSA:3.10.129.10 68 187 3.5E-38 T 01-11-2018 DOE78_08000 0b4d6ab7f339645a5a3f8637a1b05bc1 187 SUPERFAMILY SSF54637 74 183 4.98E-25 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_08000 0b4d6ab7f339645a5a3f8637a1b05bc1 187 PIRSF PIRSF037733 1 187 2.8E-85 T 01-11-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 DOE78_08000 0b4d6ab7f339645a5a3f8637a1b05bc1 187 Hamap MF_01814 Transcription factor FapR [fapR]. 1 187 37.839 T 01-11-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 DOE78_08000 0b4d6ab7f339645a5a3f8637a1b05bc1 187 Gene3D G3DSA:1.10.10.10 1 60 1.1E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08000 0b4d6ab7f339645a5a3f8637a1b05bc1 187 SUPERFAMILY SSF46785 5 51 1.49E-6 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_08000 0b4d6ab7f339645a5a3f8637a1b05bc1 187 Pfam PF08220 DeoR-like helix-turn-helix domain 8 50 2.2E-5 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_22810 b8e32877b34fff2dddbc414599d2efdf 324 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 36 321 1.4E-67 T 01-11-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DOE78_22810 b8e32877b34fff2dddbc414599d2efdf 324 Gene3D G3DSA:3.40.50.2300 132 319 2.6E-92 T 01-11-2018 DOE78_22810 b8e32877b34fff2dddbc414599d2efdf 324 Gene3D G3DSA:3.40.50.2300 36 285 2.6E-92 T 01-11-2018 DOE78_22810 b8e32877b34fff2dddbc414599d2efdf 324 SUPERFAMILY SSF53822 31 263 9.42E-13 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_17940 7c2512ad078d7308088834044147010f 483 SUPERFAMILY SSF50249 39 121 1.07E-13 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_17940 7c2512ad078d7308088834044147010f 483 Gene3D G3DSA:2.40.50.140 31 126 1.1E-24 T 01-11-2018 DOE78_17940 7c2512ad078d7308088834044147010f 483 Pfam PF10150 Ribonuclease E/G family 123 388 3.4E-83 T 01-11-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DOE78_17940 7c2512ad078d7308088834044147010f 483 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 421 3.1E-118 T 01-11-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DOE78_17940 7c2512ad078d7308088834044147010f 483 SMART SM00316 37 120 9.2E-5 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_17940 7c2512ad078d7308088834044147010f 483 Pfam PF00575 S1 RNA binding domain 38 75 1.2E-4 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Pfam PF13184 NusA-like KH domain 229 296 9.5E-29 T 01-11-2018 IPR025249 KH domain, NusA-like GO:0003723 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Pfam PF08529 NusA N-terminal domain 4 123 1.3E-41 T 01-11-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Gene3D G3DSA:3.30.300.20 198 276 2.0E-34 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 SMART SM00322 302 377 0.46 T 01-11-2018 IPR004087 K Homology domain GO:0003676 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 SMART SM00322 229 301 3.8E-4 T 01-11-2018 IPR004087 K Homology domain GO:0003676 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 SMART SM00316 133 199 8.5E-11 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 8.3E-128 T 01-11-2018 IPR010213 Transcription termination factor NusA GO:0003723 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Gene3D G3DSA:3.30.1480.10 1 124 1.7E-47 T 01-11-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 SUPERFAMILY SSF50249 132 198 1.4E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 SUPERFAMILY SSF69705 1 126 8.89E-41 T 01-11-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Gene3D G3DSA:3.30.300.20 277 378 7.9E-33 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Pfam PF00575 S1 RNA binding domain 133 193 3.7E-11 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Gene3D G3DSA:2.40.50.140 136 197 3.4E-25 T 01-11-2018 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 SUPERFAMILY SSF54814 199 277 5.62E-31 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 380 30.744 T 01-11-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DOE78_08375 c95b49f58c0b4f89284d3a224742bc10 380 SUPERFAMILY SSF54814 278 341 1.11E-16 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DOE78_06240 04a07d949678e29a04951320494b975c 506 Gene3D G3DSA:3.50.50.60 201 324 7.5E-16 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_06240 04a07d949678e29a04951320494b975c 506 Gene3D G3DSA:3.50.50.60 2 89 1.9E-24 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_06240 04a07d949678e29a04951320494b975c 506 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 3.3E-7 T 01-11-2018 DOE78_06240 04a07d949678e29a04951320494b975c 506 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 3.3E-7 T 01-11-2018 DOE78_06240 04a07d949678e29a04951320494b975c 506 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 459 479 - T 01-11-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site DOE78_06240 04a07d949678e29a04951320494b975c 506 Pfam PF01593 Flavin containing amine oxidoreductase 14 484 4.8E-18 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DOE78_06240 04a07d949678e29a04951320494b975c 506 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 492 1.8E-146 T 01-11-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 DOE78_06240 04a07d949678e29a04951320494b975c 506 SUPERFAMILY SSF51905 1 487 1.39E-62 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 6.1E-72 T 01-11-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 Gene3D G3DSA:3.40.50.10860 8 275 4.3E-115 T 01-11-2018 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 SUPERFAMILY SSF51735 122 279 7.85E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 SUPERFAMILY SSF53223 2 121 1.06E-39 T 01-11-2018 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 6.7E-83 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 6.7E-83 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 6.7E-83 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 6.7E-83 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 6.7E-83 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 6.7E-83 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 6.7E-83 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 01-11-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 Gene3D G3DSA:3.40.50.720 6 258 4.3E-115 T 01-11-2018 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 39.189 T 01-11-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_16860 f5c7d82928c89543b281e93cea43a681 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 120 1.3E-40 T 01-11-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 SUPERFAMILY SSF46689 234 280 2.57E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 3.4E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 3.4E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 Gene3D G3DSA:1.10.10.60 231 278 1.6E-16 T 01-11-2018 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 Gene3D G3DSA:2.60.120.10 37 137 1.7E-8 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 SUPERFAMILY SSF46689 282 333 2.37E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 SUPERFAMILY SSF51182 64 171 7.12E-7 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 Gene3D G3DSA:1.10.10.60 279 338 1.2E-18 T 01-11-2018 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 Pfam PF02311 AraC-like ligand binding domain 75 148 4.0E-5 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 SMART SM00342 246 329 1.6E-29 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02550 3851b8f636df654b4e8e831a9a31813a 340 Pfam PF12833 Helix-turn-helix domain 252 331 1.4E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_23095 d6e20d6105f9410873fb0cf09e8681ce 409 Pfam PF00534 Glycosyl transferases group 1 217 385 4.0E-13 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23095 d6e20d6105f9410873fb0cf09e8681ce 409 SUPERFAMILY SSF53756 13 409 2.43E-36 T 01-11-2018 DOE78_23095 d6e20d6105f9410873fb0cf09e8681ce 409 Gene3D G3DSA:3.40.50.2000 9 220 1.2E-13 T 01-11-2018 DOE78_23095 d6e20d6105f9410873fb0cf09e8681ce 409 Gene3D G3DSA:3.40.50.2000 222 394 7.7E-20 T 01-11-2018 DOE78_09530 311216658ee62394113fce928754018d 149 Pfam PF00293 NUDIX domain 18 127 3.9E-15 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_09530 311216658ee62394113fce928754018d 149 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_09530 311216658ee62394113fce928754018d 149 SUPERFAMILY SSF55811 6 142 5.96E-25 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_09530 311216658ee62394113fce928754018d 149 Gene3D G3DSA:3.90.79.10 3 146 7.3E-32 T 01-11-2018 DOE78_16890 df2437ca1eec3ed0465b4e2a69290dfc 342 SUPERFAMILY SSF111337 1 341 3.53E-79 T 01-11-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DOE78_16890 df2437ca1eec3ed0465b4e2a69290dfc 342 Gene3D G3DSA:3.40.1780.10 26 341 8.7E-78 T 01-11-2018 DOE78_16890 df2437ca1eec3ed0465b4e2a69290dfc 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 1.2E-82 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DOE78_16890 df2437ca1eec3ed0465b4e2a69290dfc 342 Gene3D G3DSA:2.40.10.240 68 170 8.7E-78 T 01-11-2018 DOE78_16515 f6e9647e414056d2a2042c924ff343eb 446 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.1E-13 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_16515 f6e9647e414056d2a2042c924ff343eb 446 Gene3D G3DSA:1.10.10.10 1 68 2.1E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16515 f6e9647e414056d2a2042c924ff343eb 446 Gene3D G3DSA:3.40.640.10 69 433 2.1E-80 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_16515 f6e9647e414056d2a2042c924ff343eb 446 SUPERFAMILY SSF53383 70 439 2.99E-70 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_16515 f6e9647e414056d2a2042c924ff343eb 446 SUPERFAMILY SSF46785 3 76 1.17E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_16515 f6e9647e414056d2a2042c924ff343eb 446 Pfam PF00155 Aminotransferase class I and II 97 434 6.8E-24 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_16515 f6e9647e414056d2a2042c924ff343eb 446 SMART SM00345 7 66 2.2E-13 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_20635 2ed59f6655c0d341d081b634e3024bda 236 SUPERFAMILY SSF88713 1 226 7.78E-65 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_20635 2ed59f6655c0d341d081b634e3024bda 236 Gene3D G3DSA:3.20.20.370 2 235 3.6E-73 T 01-11-2018 DOE78_20635 2ed59f6655c0d341d081b634e3024bda 236 Pfam PF04794 YdjC-like protein 3 226 3.6E-57 T 01-11-2018 IPR006879 Carbohydrate deacetylase YdjC-like DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 Pfam PF00072 Response regulator receiver domain 5 114 8.4E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 5.5E-28 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 SUPERFAMILY SSF46894 129 230 1.21E-32 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 SUPERFAMILY SSF52172 2 128 3.84E-44 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 Gene3D G3DSA:1.10.10.10 132 235 4.9E-42 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 SMART SM00862 153 229 1.4E-28 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 Gene3D G3DSA:3.40.50.2300 1 131 2.7E-40 T 01-11-2018 DOE78_24580 a3597732c1480ae8d019524a22b449b6 235 SMART SM00448 3 113 4.5E-47 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 Gene3D G3DSA:1.20.1480.50 169 263 1.3E-13 T 01-11-2018 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 Pfam PF00672 HAMP domain 207 254 1.1E-6 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 SMART SM00283 287 562 3.0E-72 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 SUPERFAMILY SSF58104 230 562 1.23E-70 T 01-11-2018 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 412 8.6E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 8.6E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 308 337 8.6E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 8.6E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 SMART SM00304 205 258 3.7E-5 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 515 1.0E-43 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 Gene3D G3DSA:1.20.1440.210 48 168 3.7E-9 T 01-11-2018 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 Gene3D G3DSA:1.10.287.950 289 562 2.3E-65 T 01-11-2018 DOE78_14775 5256d468f30d49b658a881abff4dc09f 563 Pfam PF05227 CHASE3 domain 51 169 1.2E-11 T 01-11-2018 IPR007891 CHASE3 DOE78_17965 c228b0f582e8c29bb669ad4ec500e192 164 Pfam PF04093 rod shape-determining protein MreD 2 152 1.1E-28 T 01-11-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DOE78_17965 c228b0f582e8c29bb669ad4ec500e192 164 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 4 151 3.8E-26 T 01-11-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DOE78_20610 e5db6643812848143a4fe63944ef8dce 293 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 12 292 1.2E-62 T 01-11-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DOE78_20610 e5db6643812848143a4fe63944ef8dce 293 Gene3D G3DSA:3.40.50.10860 15 282 5.0E-94 T 01-11-2018 DOE78_20610 e5db6643812848143a4fe63944ef8dce 293 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 16 98 1.5E-26 T 01-11-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DOE78_20610 e5db6643812848143a4fe63944ef8dce 293 Gene3D G3DSA:3.40.50.720 112 266 5.0E-94 T 01-11-2018 DOE78_20610 e5db6643812848143a4fe63944ef8dce 293 SUPERFAMILY SSF51735 111 291 4.76E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_20610 e5db6643812848143a4fe63944ef8dce 293 SUPERFAMILY SSF53223 7 110 4.2E-32 T 01-11-2018 DOE78_20610 e5db6643812848143a4fe63944ef8dce 293 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 11 291 32.33 T 01-11-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 SUPERFAMILY SSF46689 285 335 4.06E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 Gene3D G3DSA:1.10.10.60 335 391 9.2E-20 T 01-11-2018 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 Gene3D G3DSA:1.10.10.60 282 334 1.7E-15 T 01-11-2018 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 SUPERFAMILY SSF52172 3 129 1.85E-34 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 Gene3D G3DSA:3.40.50.2300 2 138 1.2E-33 T 01-11-2018 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 SMART SM00448 3 117 2.7E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 Pfam PF12833 Helix-turn-helix domain 308 385 7.2E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 SUPERFAMILY SSF46689 337 386 1.43E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 Pfam PF00072 Response regulator receiver domain 5 117 3.4E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 SMART SM00342 301 384 5.0E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 1.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11945 0e8b434f7605543f1d58446f637b46fa 406 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 1.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_22200 362f7bd85a9128131fb4352e2e60ab1f 179 Gene3D G3DSA:2.160.10.10 27 172 1.1E-28 T 01-11-2018 DOE78_22200 362f7bd85a9128131fb4352e2e60ab1f 179 SUPERFAMILY SSF51161 11 159 9.84E-33 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_22200 362f7bd85a9128131fb4352e2e60ab1f 179 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 1.3E-8 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_18260 7de99de772299d013418bffd12b6b641 194 Gene3D G3DSA:1.10.357.10 50 194 4.6E-37 T 01-11-2018 DOE78_18260 7de99de772299d013418bffd12b6b641 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 3.3E-17 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_18260 7de99de772299d013418bffd12b6b641 194 SUPERFAMILY SSF48498 78 193 1.26E-27 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_18260 7de99de772299d013418bffd12b6b641 194 Pfam PF08359 YsiA-like protein, C-terminal region 58 190 5.4E-63 T 01-11-2018 IPR013570 Transcription regulator YsiA, C-terminal DOE78_18260 7de99de772299d013418bffd12b6b641 194 Gene3D G3DSA:1.10.10.60 1 49 6.4E-23 T 01-11-2018 DOE78_18260 7de99de772299d013418bffd12b6b641 194 SUPERFAMILY SSF46689 5 81 3.54E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_18260 7de99de772299d013418bffd12b6b641 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.9E-11 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_18260 7de99de772299d013418bffd12b6b641 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.9E-11 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 Pfam PF05746 DALR anticodon binding domain 438 556 7.9E-42 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 Gene3D G3DSA:3.30.1360.70 2 115 3.8E-28 T 01-11-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 Gene3D G3DSA:3.40.50.620 124 431 1.3E-178 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 SMART SM01016 9 95 4.1E-34 T 01-11-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 Gene3D G3DSA:1.10.730.10 432 556 1.3E-178 T 01-11-2018 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 9 556 8.2E-178 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 SUPERFAMILY SSF52374 118 448 8.73E-98 T 01-11-2018 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 Pfam PF00750 tRNA synthetases class I (R) 104 400 4.1E-27 T 01-11-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 556 28.732 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 SUPERFAMILY SSF55190 11 115 1.31E-26 T 01-11-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 SUPERFAMILY SSF47323 432 556 3.27E-37 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 94 3.4E-25 T 01-11-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 8.0E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 8.0E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 8.0E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 8.0E-25 T 01-11-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DOE78_23905 c05e44ee4e1355e6a0c5b37467241a1d 556 SMART SM00836 437 556 4.2E-58 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DOE78_02445 26afb30b5c365dee418997f6c4f1a866 187 SUPERFAMILY SSF102405 2 179 4.73E-60 T 01-11-2018 DOE78_02445 26afb30b5c365dee418997f6c4f1a866 187 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 1.3E-56 T 01-11-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DOE78_02445 26afb30b5c365dee418997f6c4f1a866 187 Pfam PF03641 Possible lysine decarboxylase 46 175 4.5E-43 T 01-11-2018 IPR031100 LOG family DOE78_02445 26afb30b5c365dee418997f6c4f1a866 187 Gene3D G3DSA:3.40.50.450 1 187 2.3E-74 T 01-11-2018 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 SUPERFAMILY SSF52518 342 528 2.33E-69 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 339 2.1E-155 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 SUPERFAMILY SSF52518 9 326 8.85E-118 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 SMART SM00861 355 526 2.7E-69 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 665 3.5E-302 T 01-11-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 SUPERFAMILY SSF52922 535 666 1.57E-40 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 3.2E-45 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 Gene3D G3DSA:3.40.50.970 4 331 9.4E-128 T 01-11-2018 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 Gene3D G3DSA:3.40.50.970 332 539 3.5E-80 T 01-11-2018 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 Gene3D G3DSA:3.40.50.920 541 666 6.2E-43 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_08690 a03358e1b2aae7ed49edb48be9ff2154 666 Pfam PF02780 Transketolase, C-terminal domain 550 658 4.8E-10 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_07110 dd3456e0cb1ecbf1190f1038e7816ee8 149 SUPERFAMILY SSF46785 11 145 2.73E-31 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_07110 dd3456e0cb1ecbf1190f1038e7816ee8 149 Gene3D G3DSA:1.10.10.10 2 147 2.1E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_07110 dd3456e0cb1ecbf1190f1038e7816ee8 149 SMART SM00347 31 131 3.6E-27 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_07110 dd3456e0cb1ecbf1190f1038e7816ee8 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 6.5E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_07110 dd3456e0cb1ecbf1190f1038e7816ee8 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 6.5E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_07110 dd3456e0cb1ecbf1190f1038e7816ee8 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 6.5E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_07110 dd3456e0cb1ecbf1190f1038e7816ee8 149 Pfam PF01047 MarR family 38 95 1.3E-15 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 Gene3D G3DSA:3.40.50.12740 2 218 5.2E-69 T 01-11-2018 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 7.9E-19 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 SMART SM00421 155 212 3.3E-26 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 SMART SM00448 2 115 1.5E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 SUPERFAMILY SSF52172 1 133 3.84E-33 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 Pfam PF00072 Response regulator receiver domain 4 116 4.9E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 SUPERFAMILY SSF46894 151 218 2.41E-22 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 8.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 8.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_02890 ec38bd13e8f7dbedb229e8dc437ad428 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 8.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_21645 19046a001b9331e46cf080b41ac63704 684 Gene3D G3DSA:3.30.70.270 254 422 1.8E-21 T 01-11-2018 DOE78_21645 19046a001b9331e46cf080b41ac63704 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 391 3.0E-16 T 01-11-2018 IPR000160 GGDEF domain DOE78_21645 19046a001b9331e46cf080b41ac63704 684 SUPERFAMILY SSF141868 424 673 1.2E-77 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_21645 19046a001b9331e46cf080b41ac63704 684 SUPERFAMILY SSF55073 262 411 5.73E-18 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_21645 19046a001b9331e46cf080b41ac63704 684 Pfam PF00563 EAL domain 425 660 2.3E-63 T 01-11-2018 IPR001633 EAL domain DOE78_21645 19046a001b9331e46cf080b41ac63704 684 SMART SM00052 418 665 4.3E-88 T 01-11-2018 IPR001633 EAL domain DOE78_21645 19046a001b9331e46cf080b41ac63704 684 SMART SM00267 245 409 1.1E-8 T 01-11-2018 IPR000160 GGDEF domain DOE78_21645 19046a001b9331e46cf080b41ac63704 684 Gene3D G3DSA:3.20.20.450 423 672 7.7E-85 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_21645 19046a001b9331e46cf080b41ac63704 684 Pfam PF03707 Bacterial signalling protein N terminal repeat 124 174 3.4E-13 T 01-11-2018 IPR005330 MHYT domain DOE78_21645 19046a001b9331e46cf080b41ac63704 684 Pfam PF03707 Bacterial signalling protein N terminal repeat 190 240 1.1E-5 T 01-11-2018 IPR005330 MHYT domain DOE78_21645 19046a001b9331e46cf080b41ac63704 684 Pfam PF03707 Bacterial signalling protein N terminal repeat 61 111 2.4E-16 T 01-11-2018 IPR005330 MHYT domain DOE78_23255 7bf4e56713188e0b48f9d9939cfe38f8 254 Gene3D G3DSA:3.90.550.10 1 253 3.2E-57 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_23255 7bf4e56713188e0b48f9d9939cfe38f8 254 Pfam PF00535 Glycosyl transferase family 2 13 130 1.7E-27 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_23255 7bf4e56713188e0b48f9d9939cfe38f8 254 SUPERFAMILY SSF53448 10 214 1.41E-47 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 Gene3D G3DSA:3.90.228.20 214 513 2.5E-226 T 01-11-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 PIRSF PIRSF006294 2 528 3.0E-245 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 527 4.2E-251 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 SUPERFAMILY SSF53795 213 523 2.38E-135 T 01-11-2018 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 SUPERFAMILY SSF68923 13 211 2.09E-81 T 01-11-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 480 1.6E-229 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 Gene3D G3DSA:2.170.8.10 38 330 2.5E-226 T 01-11-2018 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 250 265 - T 01-11-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 Gene3D G3DSA:3.40.449.10 28 213 2.5E-226 T 01-11-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DOE78_19475 22e0dc0dcba87b27ded62e423611b97d 528 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 528 55.964 T 01-11-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 Gene3D G3DSA:3.20.20.450 1 228 3.5E-61 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 SMART SM00052 2 240 3.0E-13 T 01-11-2018 IPR001633 EAL domain DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 Pfam PF10388 EAL-domain associated signalling protein domain 239 404 1.2E-71 T 01-11-2018 IPR018842 YkuI, C-terminal DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 SUPERFAMILY SSF103190 262 401 1.02E-38 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 Gene3D G3DSA:1.20.5.170 245 289 1.6E-11 T 01-11-2018 DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 Pfam PF00563 EAL domain 10 235 1.0E-31 T 01-11-2018 IPR001633 EAL domain DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 Gene3D G3DSA:3.30.450.20 290 404 4.1E-45 T 01-11-2018 DOE78_07240 a8e5c4b93deaab38b09cbd16fdf1869b 404 SUPERFAMILY SSF141868 3 238 9.81E-45 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_11125 1ddb0e42a692b1b15acc807b81528323 374 Pfam PF07470 Glycosyl Hydrolase Family 88 45 332 5.1E-29 T 01-11-2018 IPR010905 Glycosyl hydrolase, family 88 DOE78_11125 1ddb0e42a692b1b15acc807b81528323 374 Gene3D G3DSA:1.50.10.10 2 374 1.3E-127 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_11125 1ddb0e42a692b1b15acc807b81528323 374 SUPERFAMILY SSF48208 8 374 2.24E-97 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_05840 c0b2400a69a5db50b2b90245a331f768 299 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 4.8E-17 T 01-11-2018 IPR025302 Domain of unknown function DUF4162 DOE78_05840 c0b2400a69a5db50b2b90245a331f768 299 Gene3D G3DSA:3.40.50.300 1 232 1.9E-62 T 01-11-2018 DOE78_05840 c0b2400a69a5db50b2b90245a331f768 299 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05840 c0b2400a69a5db50b2b90245a331f768 299 Pfam PF00005 ABC transporter 19 158 1.9E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05840 c0b2400a69a5db50b2b90245a331f768 299 SUPERFAMILY SSF52540 2 224 1.66E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05840 c0b2400a69a5db50b2b90245a331f768 299 SMART SM00382 27 240 3.4E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 SUPERFAMILY SSF56281 124 370 9.61E-43 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 Pfam PF00581 Rhodanese-like domain 7 105 1.7E-9 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 SMART SM00450 7 109 3.4E-13 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 Pfam PF00753 Metallo-beta-lactamase superfamily 130 294 2.4E-12 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 Gene3D G3DSA:3.40.250.10 1 111 3.6E-17 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 SMART SM00849 130 294 5.4E-28 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 Gene3D G3DSA:3.60.15.10 119 355 2.1E-48 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_01080 0944fcb8c848f213267fc80a2d8a7a0a 375 SUPERFAMILY SSF52821 2 110 2.49E-17 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 Gene3D G3DSA:3.30.70.360 177 288 2.0E-133 T 01-11-2018 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 Gene3D G3DSA:3.40.630.10 14 363 2.0E-133 T 01-11-2018 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 Pfam PF01546 Peptidase family M20/M25/M40 74 368 1.2E-21 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 01-11-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 Pfam PF07687 Peptidase dimerisation domain 181 274 2.8E-17 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 PIRSF PIRSF001123 281 372 0.0091 T 01-11-2018 IPR008007 Peptidase M42 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 PIRSF PIRSF001123 92 179 7.0E-6 T 01-11-2018 IPR008007 Peptidase M42 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 PIRSF PIRSF001123 4 96 0.0041 T 01-11-2018 IPR008007 Peptidase M42 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 SUPERFAMILY SSF53187 5 369 2.16E-61 T 01-11-2018 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 01-11-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 SUPERFAMILY SSF55031 180 285 2.62E-22 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_16705 38de91c47807e7f2fd67e0e192423183 372 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 368 9.3E-165 T 01-11-2018 IPR010162 Peptidase M20B, peptidase T-like DOE78_03050 42da7f96d50d0f7c6ec1f6381f0f74b2 372 Gene3D G3DSA:3.30.9.10 88 311 8.4E-83 T 01-11-2018 DOE78_03050 42da7f96d50d0f7c6ec1f6381f0f74b2 372 Gene3D G3DSA:3.50.50.60 5 351 8.4E-83 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_03050 42da7f96d50d0f7c6ec1f6381f0f74b2 372 SUPERFAMILY SSF51905 4 366 4.27E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_03050 42da7f96d50d0f7c6ec1f6381f0f74b2 372 SUPERFAMILY SSF54373 223 312 1.16E-16 T 01-11-2018 DOE78_03050 42da7f96d50d0f7c6ec1f6381f0f74b2 372 Pfam PF01266 FAD dependent oxidoreductase 5 351 2.5E-54 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DOE78_22460 b7519868c53690e54de2d45f6b81b2e5 303 Pfam PF03239 Iron permease FTR1 family 4 204 1.1E-34 T 01-11-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 DOE78_22690 a0e5a6b8d058e91b4bbf78edd311d4ec 551 Gene3D G3DSA:3.40.190.10 189 432 7.6E-33 T 01-11-2018 DOE78_22690 a0e5a6b8d058e91b4bbf78edd311d4ec 551 Gene3D G3DSA:3.40.190.10 52 188 7.5E-26 T 01-11-2018 DOE78_22690 a0e5a6b8d058e91b4bbf78edd311d4ec 551 Pfam PF13416 Bacterial extracellular solute-binding protein 79 397 1.2E-41 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_22690 a0e5a6b8d058e91b4bbf78edd311d4ec 551 SUPERFAMILY SSF53850 25 541 1.21E-79 T 01-11-2018 DOE78_13240 a33f5f98b27c86ed04c0fed87c90f1cb 471 Gene3D G3DSA:3.20.20.140 53 424 1.2E-186 T 01-11-2018 DOE78_13240 a33f5f98b27c86ed04c0fed87c90f1cb 471 SUPERFAMILY SSF51338 3 455 1.61E-34 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_13240 a33f5f98b27c86ed04c0fed87c90f1cb 471 Gene3D G3DSA:2.30.40.10 4 456 1.2E-186 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_13240 a33f5f98b27c86ed04c0fed87c90f1cb 471 SUPERFAMILY SSF51556 53 383 1.63E-109 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_13240 a33f5f98b27c86ed04c0fed87c90f1cb 471 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 455 2.0E-200 T 01-11-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 DOE78_13240 a33f5f98b27c86ed04c0fed87c90f1cb 471 Pfam PF01979 Amidohydrolase family 49 437 1.7E-24 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 Gene3D G3DSA:3.20.20.80 2 381 2.3E-104 T 01-11-2018 DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 SUPERFAMILY SSF51445 4 356 6.63E-92 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 PIRSF PIRSF001084 1 661 8.4E-194 T 01-11-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 Pfam PF02449 Beta-galactosidase 11 374 1.1E-119 T 01-11-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 Gene3D G3DSA:3.40.50.880 386 594 6.5E-30 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 Pfam PF08533 Beta-galactosidase C-terminal domain 602 659 1.3E-5 T 01-11-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 SUPERFAMILY SSF52317 385 593 4.35E-28 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_08895 6754ea5b6fe2588e2bf32f15315d7ef1 665 Pfam PF08532 Beta-galactosidase trimerisation domain 388 593 5.8E-40 T 01-11-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_03135 f038f8e3de1d4170fe0546af6b2866e3 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 291 8.6E-63 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DOE78_03135 f038f8e3de1d4170fe0546af6b2866e3 331 Gene3D G3DSA:3.40.50.720 32 318 6.9E-100 T 01-11-2018 DOE78_03135 f038f8e3de1d4170fe0546af6b2866e3 331 Gene3D G3DSA:3.40.50.720 108 288 6.9E-100 T 01-11-2018 DOE78_03135 f038f8e3de1d4170fe0546af6b2866e3 331 SUPERFAMILY SSF51735 112 292 6.81E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_03135 f038f8e3de1d4170fe0546af6b2866e3 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 231 247 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE78_03135 f038f8e3de1d4170fe0546af6b2866e3 331 SUPERFAMILY SSF52283 44 140 2.13E-18 T 01-11-2018 DOE78_03135 f038f8e3de1d4170fe0546af6b2866e3 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 47 321 1.9E-10 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DOE78_23555 e772b9de1f9d3f13bb64acbe3792eb5e 221 Pfam PF00929 Exonuclease 29 190 3.0E-23 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_23555 e772b9de1f9d3f13bb64acbe3792eb5e 221 SUPERFAMILY SSF53098 21 209 8.59E-42 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_23555 e772b9de1f9d3f13bb64acbe3792eb5e 221 Gene3D G3DSA:3.30.420.10 20 204 3.2E-39 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_23555 e772b9de1f9d3f13bb64acbe3792eb5e 221 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 26 195 8.0E-23 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_23555 e772b9de1f9d3f13bb64acbe3792eb5e 221 SMART SM00479 27 199 3.0E-37 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_18295 978e68de5458a7b3553564a5dec57583 311 Gene3D G3DSA:3.30.310.10 1 87 8.6E-27 T 01-11-2018 IPR012295 TBP domain superfamily DOE78_18295 978e68de5458a7b3553564a5dec57583 311 PIRSF PIRSF037748 1 309 1.6E-124 T 01-11-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 DOE78_18295 978e68de5458a7b3553564a5dec57583 311 Pfam PF11858 Domain of unknown function (DUF3378) 3 77 8.6E-26 T 01-11-2018 IPR024568 Ribonuclease HIII, N-terminal DOE78_18295 978e68de5458a7b3553564a5dec57583 311 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 5 300 1.2E-94 T 01-11-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 DOE78_18295 978e68de5458a7b3553564a5dec57583 311 Gene3D G3DSA:3.30.420.10 93 311 1.7E-79 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_18295 978e68de5458a7b3553564a5dec57583 311 Pfam PF01351 Ribonuclease HII 96 301 4.8E-48 T 01-11-2018 IPR024567 Ribonuclease HII/HIII domain DOE78_18295 978e68de5458a7b3553564a5dec57583 311 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 308 35.044 T 01-11-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 DOE78_18295 978e68de5458a7b3553564a5dec57583 311 SUPERFAMILY SSF53098 94 308 2.12E-50 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_12665 54ba00b814fe0bdcf592607a91e3e382 220 SUPERFAMILY SSF48317 12 212 2.62E-40 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE78_12665 54ba00b814fe0bdcf592607a91e3e382 220 SMART SM00014 89 201 2.3E-29 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE78_12665 54ba00b814fe0bdcf592607a91e3e382 220 Pfam PF01569 PAP2 superfamily 90 206 6.4E-20 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE78_12665 54ba00b814fe0bdcf592607a91e3e382 220 Gene3D G3DSA:1.20.144.10 3 120 5.5E-8 T 01-11-2018 DOE78_12665 54ba00b814fe0bdcf592607a91e3e382 220 Gene3D G3DSA:1.20.144.10 121 219 2.3E-27 T 01-11-2018 DOE78_14115 1a62f876c336cb26a423cfc6142aecd4 194 SUPERFAMILY SSF46689 4 83 1.4E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_14115 1a62f876c336cb26a423cfc6142aecd4 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE78_14115 1a62f876c336cb26a423cfc6142aecd4 194 Gene3D G3DSA:1.10.357.10 1 193 5.7E-65 T 01-11-2018 DOE78_14115 1a62f876c336cb26a423cfc6142aecd4 194 SUPERFAMILY SSF48498 79 189 4.77E-10 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_14115 1a62f876c336cb26a423cfc6142aecd4 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.1E-17 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_14115 1a62f876c336cb26a423cfc6142aecd4 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.3E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_14115 1a62f876c336cb26a423cfc6142aecd4 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.3E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_21780 f17bdfcc5c69ece676446934bb39e303 441 Gene3D G3DSA:3.40.190.10 159 431 4.2E-91 T 01-11-2018 DOE78_21780 f17bdfcc5c69ece676446934bb39e303 441 Pfam PF01547 Bacterial extracellular solute-binding protein 56 351 1.0E-41 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_21780 f17bdfcc5c69ece676446934bb39e303 441 SUPERFAMILY SSF53850 45 432 7.41E-81 T 01-11-2018 DOE78_21780 f17bdfcc5c69ece676446934bb39e303 441 Gene3D G3DSA:3.40.190.10 61 394 4.2E-91 T 01-11-2018 DOE78_21780 f17bdfcc5c69ece676446934bb39e303 441 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 153 170 - T 01-11-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 Gene3D G3DSA:1.20.140.10 274 482 1.6E-75 T 01-11-2018 DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 SUPERFAMILY SSF47203 261 476 5.65E-59 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 Gene3D G3DSA:2.40.110.10 145 271 3.7E-40 T 01-11-2018 DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 6 270 8.5E-87 T 01-11-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 4 477 1.3E-160 T 01-11-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 SUPERFAMILY SSF56645 4 271 2.04E-69 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 Gene3D G3DSA:1.10.3140.10 3 144 1.3E-41 T 01-11-2018 DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 279 475 1.3E-63 T 01-11-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal DOE78_09930 f87537e87c2d98441ef3a73aaf56bcb5 482 PIRSF PIRSF000331 2 482 2.0E-148 T 01-11-2018 IPR004925 HpaB/PvcC/4-BUDH DOE78_08730 79b859c5174f69d366fc96cc504d6ffa 119 SUPERFAMILY SSF52172 1 119 2.28E-39 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_08730 79b859c5174f69d366fc96cc504d6ffa 119 Pfam PF00072 Response regulator receiver domain 4 115 7.0E-33 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08730 79b859c5174f69d366fc96cc504d6ffa 119 Gene3D G3DSA:3.40.50.12740 2 119 6.0E-40 T 01-11-2018 DOE78_08730 79b859c5174f69d366fc96cc504d6ffa 119 SMART SM00448 2 114 9.5E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_16955 042135783040588b8958db902e0975d0 185 SUPERFAMILY SSF50249 128 185 5.65E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_16955 042135783040588b8958db902e0975d0 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.0E-26 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DOE78_16955 042135783040588b8958db902e0975d0 185 SMART SM00841 129 184 6.5E-35 T 01-11-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DOE78_16955 042135783040588b8958db902e0975d0 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 01-11-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DOE78_16955 042135783040588b8958db902e0975d0 185 PIRSF PIRSF005901 1 185 4.2E-72 T 01-11-2018 IPR020599 Translation elongation factor P/YeiP DOE78_16955 042135783040588b8958db902e0975d0 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 7.2E-81 T 01-11-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DOE78_16955 042135783040588b8958db902e0975d0 185 SMART SM01185 67 121 8.0E-26 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DOE78_16955 042135783040588b8958db902e0975d0 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 1.2E-21 T 01-11-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DOE78_16955 042135783040588b8958db902e0975d0 185 Gene3D G3DSA:2.40.50.140 128 185 1.4E-26 T 01-11-2018 DOE78_16955 042135783040588b8958db902e0975d0 185 Gene3D G3DSA:2.30.30.30 1 62 1.0E-31 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 DOE78_16955 042135783040588b8958db902e0975d0 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.694 T 01-11-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DOE78_16955 042135783040588b8958db902e0975d0 185 Gene3D G3DSA:2.40.50.140 64 127 7.4E-26 T 01-11-2018 DOE78_16955 042135783040588b8958db902e0975d0 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 7.2E-29 T 01-11-2018 IPR013185 Translation elongation factor, KOW-like DOE78_16955 042135783040588b8958db902e0975d0 185 SUPERFAMILY SSF50249 65 129 1.29E-20 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_16955 042135783040588b8958db902e0975d0 185 SUPERFAMILY SSF50104 1 62 4.45E-22 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 7.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.2E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.2E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 Pfam PF00106 short chain dehydrogenase 6 198 4.1E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 Gene3D G3DSA:3.40.50.720 3 235 6.2E-69 T 01-11-2018 DOE78_06350 f64ff10b5bf8410feea78d260dcf2202 235 SUPERFAMILY SSF51735 6 235 1.06E-59 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_17110 d95f03780a0dc8302ad364e07d636749 381 Gene3D G3DSA:2.120.10.30 55 259 2.9E-5 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_17110 d95f03780a0dc8302ad364e07d636749 381 SUPERFAMILY SSF69322 73 362 1.83E-7 T 01-11-2018 DOE78_12580 021a35a2ab649af855b3165a992f3254 250 Pfam PF01740 STAS domain 143 231 2.5E-8 T 01-11-2018 IPR002645 STAS domain DOE78_12580 021a35a2ab649af855b3165a992f3254 250 Gene3D G3DSA:3.30.750.24 135 249 4.0E-26 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_12580 021a35a2ab649af855b3165a992f3254 250 SUPERFAMILY SSF52091 141 248 2.94E-12 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_12580 021a35a2ab649af855b3165a992f3254 250 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 124 2.4E-14 T 01-11-2018 IPR000014 PAS domain DOE78_12580 021a35a2ab649af855b3165a992f3254 250 Pfam PF13426 PAS domain 21 116 1.4E-7 T 01-11-2018 IPR000014 PAS domain DOE78_12580 021a35a2ab649af855b3165a992f3254 250 SMART SM00091 8 73 4.4E-5 T 01-11-2018 IPR000014 PAS domain DOE78_12580 021a35a2ab649af855b3165a992f3254 250 Gene3D G3DSA:3.30.450.20 11 134 1.5E-16 T 01-11-2018 DOE78_12580 021a35a2ab649af855b3165a992f3254 250 SUPERFAMILY SSF55785 22 124 4.83E-15 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 400 8.2E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 SUPERFAMILY SSF55874 251 400 6.94E-33 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 SMART SM00388 189 255 1.5E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 Gene3D G3DSA:3.30.565.10 249 401 1.2E-34 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 251 2.9E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 SUPERFAMILY SSF47384 179 253 1.04E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 2.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 2.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 2.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 Gene3D G3DSA:1.10.287.130 175 248 5.2E-17 T 01-11-2018 DOE78_24410 ca295e7386a7f3eff3fa2eaf784735d0 403 SMART SM00387 297 403 1.7E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_20870 52f00ffc6cd87ebcfd656201e495d2b2 158 Pfam PF01899 Na+/H+ ion antiporter subunit 8 156 2.1E-45 T 01-11-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DOE78_20870 52f00ffc6cd87ebcfd656201e495d2b2 158 PIRSF PIRSF019239 1 158 7.2E-47 T 01-11-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DOE78_04135 c298880516423e1574a305763ffc9c72 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 155 37.332 T 01-11-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DOE78_04135 c298880516423e1574a305763ffc9c72 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 01-11-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DOE78_04135 c298880516423e1574a305763ffc9c72 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 9.3E-35 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DOE78_04135 c298880516423e1574a305763ffc9c72 163 Gene3D G3DSA:1.10.10.10 74 159 4.7E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04135 c298880516423e1574a305763ffc9c72 163 SUPERFAMILY SSF46767 74 155 7.72E-31 T 01-11-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DOE78_04135 c298880516423e1574a305763ffc9c72 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 4.4E-30 T 01-11-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DOE78_04135 c298880516423e1574a305763ffc9c72 163 Gene3D G3DSA:3.30.160.70 5 70 5.9E-10 T 01-11-2018 DOE78_04135 c298880516423e1574a305763ffc9c72 163 SUPERFAMILY SSF53155 5 79 4.71E-16 T 01-11-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 PIRSF PIRSF000381 1 1150 0.0 T 01-11-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 SMART SM01018 624 707 8.1E-38 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 SUPERFAMILY SSF82282 5 379 6.02E-114 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Pfam PF02607 B12 binding domain 627 700 1.2E-21 T 01-11-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 SUPERFAMILY SSF52242 709 842 2.09E-38 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Pfam PF02310 B12 binding domain 714 804 6.4E-20 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Gene3D G3DSA:3.10.196.10 886 1148 7.1E-64 T 01-11-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Pfam PF00809 Pterin binding enzyme 340 573 1.0E-40 T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 SUPERFAMILY SSF51717 337 600 3.66E-80 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 SUPERFAMILY SSF56507 873 1148 9.29E-88 T 01-11-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Gene3D G3DSA:3.40.50.280 710 859 2.8E-46 T 01-11-2018 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Gene3D G3DSA:1.10.288.10 899 957 7.1E-64 T 01-11-2018 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Gene3D G3DSA:3.20.20.20 320 616 6.1E-103 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 SUPERFAMILY SSF47644 620 706 7.06E-24 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Gene3D G3DSA:1.10.1240.10 617 704 4.8E-27 T 01-11-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 901 1148 3.6E-55 T 01-11-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Gene3D G3DSA:3.20.20.330 1 319 8.4E-111 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 Pfam PF02574 Homocysteine S-methyltransferase 15 304 2.5E-75 T 01-11-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DOE78_14625 fafea8220b4948e9c2be3ed27be824f5 1150 TIGRFAM TIGR02082 metH: methionine synthase 10 1148 0.0 T 01-11-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_02600 ede26aca2b596dcbb003f25ebd58c7d7 293 Gene3D G3DSA:3.30.420.40 1 105 1.4E-20 T 01-11-2018 DOE78_02600 ede26aca2b596dcbb003f25ebd58c7d7 293 Gene3D G3DSA:3.30.420.40 106 293 1.2E-45 T 01-11-2018 DOE78_02600 ede26aca2b596dcbb003f25ebd58c7d7 293 SUPERFAMILY SSF53067 1 291 4.93E-50 T 01-11-2018 DOE78_02600 ede26aca2b596dcbb003f25ebd58c7d7 293 Pfam PF00480 ROK family 4 288 2.3E-48 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 Gene3D G3DSA:1.10.8.540 486 575 2.1E-32 T 01-11-2018 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 PIRSF PIRSF005419 1 678 1.1E-260 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 01-11-2018 IPR025505 FHIPEP conserved site DOE78_08265 01e8f204136b623517e8a5ce35488767 678 Gene3D G3DSA:3.40.30.60 342 485 6.0E-54 T 01-11-2018 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 4.3E-274 T 01-11-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 Pfam PF00771 FHIPEP family 15 667 1.3E-272 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 2.6E-53 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 2.6E-53 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 2.6E-53 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 2.6E-53 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 2.6E-53 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 2.6E-53 T 01-11-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DOE78_08265 01e8f204136b623517e8a5ce35488767 678 Gene3D G3DSA:1.10.490.80 577 675 1.4E-28 T 01-11-2018 DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 Gene3D G3DSA:3.10.350.10 82 134 1.6E-19 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 Gene3D G3DSA:3.10.350.10 25 78 1.5E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 SUPERFAMILY SSF54106 28 71 1.57E-11 T 01-11-2018 DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 SUPERFAMILY SSF54106 85 128 3.79E-13 T 01-11-2018 DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 SUPERFAMILY SSF54001 134 255 2.04E-41 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 Gene3D G3DSA:3.90.1720.10 135 258 8.8E-42 T 01-11-2018 DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 Pfam PF01476 LysM domain 30 70 2.2E-13 T 01-11-2018 IPR018392 LysM domain DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 Pfam PF01476 LysM domain 87 128 4.1E-16 T 01-11-2018 IPR018392 LysM domain DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 Pfam PF00877 NlpC/P60 family 154 255 2.5E-32 T 01-11-2018 IPR000064 Endopeptidase, NLPC/P60 domain DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 SMART SM00257 29 72 3.9E-14 T 01-11-2018 IPR018392 LysM domain DOE78_13320 f3cd38d2f9fbb37498e2f2775ddbc17c 258 SMART SM00257 86 129 2.0E-18 T 01-11-2018 IPR018392 LysM domain DOE78_13265 e76266cb63f542d4f0b5d5db38c88399 452 Gene3D G3DSA:3.90.1150.10 14 447 4.9E-150 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_13265 e76266cb63f542d4f0b5d5db38c88399 452 PIRSF PIRSF000521 28 450 9.9E-39 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_13265 e76266cb63f542d4f0b5d5db38c88399 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_13265 e76266cb63f542d4f0b5d5db38c88399 452 Pfam PF00202 Aminotransferase class-III 30 443 3.4E-109 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_13265 e76266cb63f542d4f0b5d5db38c88399 452 SUPERFAMILY SSF53383 19 449 3.54E-126 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_13265 e76266cb63f542d4f0b5d5db38c88399 452 Gene3D G3DSA:3.40.640.10 65 339 4.9E-150 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 Gene3D G3DSA:3.40.50.300 284 539 2.1E-44 T 01-11-2018 DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 SUPERFAMILY SSF52540 297 528 1.28E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 SUPERFAMILY SSF52540 2 254 6.12E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 Pfam PF00005 ABC transporter 18 184 1.5E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 SMART SM00382 344 520 0.0049 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 SMART SM00382 26 238 3.1E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 Pfam PF00005 ABC transporter 335 468 1.3E-15 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 Gene3D G3DSA:3.40.50.300 1 281 1.0E-58 T 01-11-2018 DOE78_14515 9d9fac590e739772f8b21594c551a7f9 539 Pfam PF12848 ABC transporter 224 303 2.4E-19 T 01-11-2018 IPR032781 ABC-transporter extension domain DOE78_20820 8d0e2169dddc8735effbddc54a90ec28 125 SMART SM01298 14 125 5.7E-61 T 01-11-2018 IPR014916 Kinase associated protein B DOE78_20820 8d0e2169dddc8735effbddc54a90ec28 125 SUPERFAMILY SSF141251 4 125 1.22E-48 T 01-11-2018 IPR038080 Kinase associated protein B superfamily DOE78_20820 8d0e2169dddc8735effbddc54a90ec28 125 Gene3D G3DSA:2.30.30.430 1 125 8.1E-51 T 01-11-2018 IPR038080 Kinase associated protein B superfamily DOE78_20820 8d0e2169dddc8735effbddc54a90ec28 125 Pfam PF08810 Kinase associated protein B 14 125 2.1E-46 T 01-11-2018 IPR014916 Kinase associated protein B DOE78_00385 d1cd688943cb2e30c250b72b5c7a555e 245 SUPERFAMILY SSF53300 4 78 3.71E-9 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_00385 d1cd688943cb2e30c250b72b5c7a555e 245 Pfam PF00092 von Willebrand factor type A domain 4 77 9.8E-8 T 01-11-2018 IPR002035 von Willebrand factor, type A DOE78_00385 d1cd688943cb2e30c250b72b5c7a555e 245 Gene3D G3DSA:3.40.50.410 1 238 2.6E-58 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_00385 d1cd688943cb2e30c250b72b5c7a555e 245 SUPERFAMILY SSF53300 133 225 1.39E-12 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_00385 d1cd688943cb2e30c250b72b5c7a555e 245 Pfam PF13519 von Willebrand factor type A domain 135 227 2.8E-7 T 01-11-2018 IPR002035 von Willebrand factor, type A DOE78_03965 74ca7a91753ab76f221bfd5437576651 283 SUPERFAMILY SSF161098 8 283 3.27E-67 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03965 74ca7a91753ab76f221bfd5437576651 283 Gene3D G3DSA:1.10.3720.10 2 270 1.2E-62 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03965 74ca7a91753ab76f221bfd5437576651 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 275 1.1E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_16635 29b07b3174427022a15c576484a6cf2b 83 Pfam PF01455 HupF/HypC family 2 64 1.6E-20 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE78_16635 29b07b3174427022a15c576484a6cf2b 83 SUPERFAMILY SSF159127 2 71 1.31E-20 T 01-11-2018 IPR037254 HupF/HypC superfamily DOE78_16635 29b07b3174427022a15c576484a6cf2b 83 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 70 2.1E-20 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE78_16635 29b07b3174427022a15c576484a6cf2b 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 9.7E-8 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE78_16635 29b07b3174427022a15c576484a6cf2b 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 9.7E-8 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE78_16635 29b07b3174427022a15c576484a6cf2b 83 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 38 54 9.7E-8 T 01-11-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC DOE78_16635 29b07b3174427022a15c576484a6cf2b 83 Gene3D G3DSA:2.40.50.970 1 73 2.0E-22 T 01-11-2018 IPR037254 HupF/HypC superfamily DOE78_11300 14535e8055e4b487b616063a74637729 294 SUPERFAMILY SSF53474 12 292 4.39E-44 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_11300 14535e8055e4b487b616063a74637729 294 Pfam PF00561 alpha/beta hydrolase fold 30 281 9.9E-22 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_11300 14535e8055e4b487b616063a74637729 294 Gene3D G3DSA:3.40.50.1820 10 293 1.2E-44 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_11300 14535e8055e4b487b616063a74637729 294 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 31 39 7.1E-10 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DOE78_11300 14535e8055e4b487b616063a74637729 294 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 59 70 7.1E-10 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DOE78_11300 14535e8055e4b487b616063a74637729 294 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 102 116 7.1E-10 T 01-11-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 Pfam PF00072 Response regulator receiver domain 5 113 1.7E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 SUPERFAMILY SSF52172 1 151 5.83E-35 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 SMART SM00342 422 505 2.0E-29 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 Gene3D G3DSA:3.40.50.12740 2 184 6.0E-38 T 01-11-2018 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 489 505 1.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 474 489 1.5E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 SUPERFAMILY SSF46689 406 456 1.02E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 Pfam PF12833 Helix-turn-helix domain 428 506 6.3E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 459 501 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 SMART SM00448 2 115 1.2E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 Gene3D G3DSA:1.10.10.60 403 455 7.6E-16 T 01-11-2018 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 SUPERFAMILY SSF46689 458 508 1.52E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04185 934ae29b17958ca431a58fbb179cfe28 511 Gene3D G3DSA:1.10.10.60 456 509 1.1E-18 T 01-11-2018 DOE78_24270 12955889824e74c4a325e9dcec474a6e 137 SUPERFAMILY SSF54523 8 57 5.18E-5 T 01-11-2018 DOE78_24270 12955889824e74c4a325e9dcec474a6e 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.0E-4 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_24270 12955889824e74c4a325e9dcec474a6e 137 Gene3D G3DSA:3.30.700.10 8 135 4.5E-6 T 01-11-2018 DOE78_24270 12955889824e74c4a325e9dcec474a6e 137 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_24270 12955889824e74c4a325e9dcec474a6e 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 1.5E-5 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 SUPERFAMILY SSF48179 169 290 4.31E-39 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 1.2E-36 T 01-11-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 165 4.7E-53 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 SUPERFAMILY SSF51735 8 168 7.72E-51 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 Gene3D G3DSA:1.10.1040.10 168 291 2.3E-39 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 Gene3D G3DSA:3.40.50.720 7 167 2.9E-54 T 01-11-2018 DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 01-11-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DOE78_07185 1cf86ca3dda3a2714b7e2ee3576c3e9a 291 PIRSF PIRSF000103 1 291 3.2E-78 T 01-11-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DOE78_18775 0eef63ae33e695e7bc8071f619941b0b 672 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 196 261 1.5E-20 T 01-11-2018 DOE78_18775 0eef63ae33e695e7bc8071f619941b0b 672 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 368 433 9.6E-16 T 01-11-2018 DOE78_18775 0eef63ae33e695e7bc8071f619941b0b 672 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 283 346 4.5E-21 T 01-11-2018 DOE78_06450 f73ab198accc4a07754743828ed5c6c6 175 SUPERFAMILY SSF52540 6 157 5.44E-17 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06450 f73ab198accc4a07754743828ed5c6c6 175 Gene3D G3DSA:3.40.50.300 5 168 2.4E-42 T 01-11-2018 DOE78_06450 f73ab198accc4a07754743828ed5c6c6 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 8 138 1.6E-27 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DOE78_06450 f73ab198accc4a07754743828ed5c6c6 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 8 156 1.4E-25 T 01-11-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 PIRSF PIRSF000729 4 366 1.1E-130 T 01-11-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 Pfam PF01472 PUA domain 285 354 2.6E-10 T 01-11-2018 IPR002478 PUA domain GO:0003723 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 Gene3D G3DSA:3.40.1160.10 4 267 3.0E-86 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 354 2.5E-120 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 1.8E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 1.8E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.8E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 1.8E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 1.8E-52 T 01-11-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 265 37.558 T 01-11-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 SUPERFAMILY SSF53633 9 259 1.83E-69 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 SUPERFAMILY SSF88697 283 346 1.27E-9 T 01-11-2018 IPR015947 PUA-like superfamily DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 SMART SM00359 283 358 4.8E-6 T 01-11-2018 IPR002478 PUA domain GO:0003723 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 Pfam PF00696 Amino acid kinase family 9 236 8.2E-47 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DOE78_24435 89673fd00523bfdbcfa61282634f12b7 376 Gene3D G3DSA:2.30.130.10 272 366 2.1E-16 T 01-11-2018 IPR036974 PUA domain superfamily GO:0003723 DOE78_06185 5a4b92cca6c82302c0343b6ba4b130d3 126 Pfam PF10970 Spore germination protein GerPE 6 123 4.7E-37 T 01-11-2018 IPR024496 Spore germination protein GerPE DOE78_06185 5a4b92cca6c82302c0343b6ba4b130d3 126 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 6 119 1.0E-19 T 01-11-2018 IPR024496 Spore germination protein GerPE DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Gene3D G3DSA:3.30.10.20 362 433 2.0E-17 T 01-11-2018 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 SMART SM00220 11 268 1.2E-73 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 SUPERFAMILY SSF54184 367 428 3.01E-5 T 01-11-2018 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Gene3D G3DSA:3.30.10.20 504 570 8.5E-13 T 01-11-2018 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Gene3D G3DSA:3.30.10.20 436 502 2.1E-13 T 01-11-2018 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Gene3D G3DSA:3.30.200.20 1 90 1.2E-33 T 01-11-2018 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Pfam PF03793 PASTA domain 367 429 5.5E-15 T 01-11-2018 IPR005543 PASTA domain DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Pfam PF03793 PASTA domain 505 568 7.5E-12 T 01-11-2018 IPR005543 PASTA domain DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Pfam PF03793 PASTA domain 439 499 9.7E-13 T 01-11-2018 IPR005543 PASTA domain DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Gene3D G3DSA:1.10.510.10 92 276 9.2E-55 T 01-11-2018 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 SMART SM00740 431 499 3.4E-10 T 01-11-2018 IPR005543 PASTA domain DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 SMART SM00740 363 430 4.7E-18 T 01-11-2018 IPR005543 PASTA domain DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 SMART SM00740 500 568 5.6E-11 T 01-11-2018 IPR005543 PASTA domain DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Gene3D G3DSA:2.60.40.2560 574 652 1.7E-19 T 01-11-2018 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 01-11-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 Pfam PF00069 Protein kinase domain 11 258 1.6E-57 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 SUPERFAMILY SSF56112 8 275 7.28E-84 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_07945 527aa0352c977c66cdb1d784f2013649 655 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 01-11-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DOE78_19905 cad50b2fc00f237319c1f8eceaa8021d 278 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 245 1.3E-20 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_19905 cad50b2fc00f237319c1f8eceaa8021d 278 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 270 4.8E-59 T 01-11-2018 DOE78_19905 cad50b2fc00f237319c1f8eceaa8021d 278 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 01-11-2018 DOE78_19905 cad50b2fc00f237319c1f8eceaa8021d 278 Gene3D G3DSA:3.40.50.1000 3 269 2.2E-63 T 01-11-2018 IPR023214 HAD superfamily DOE78_19905 cad50b2fc00f237319c1f8eceaa8021d 278 Gene3D G3DSA:3.30.1240.10 80 201 2.2E-63 T 01-11-2018 DOE78_19905 cad50b2fc00f237319c1f8eceaa8021d 278 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 271 3.1E-59 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_19905 cad50b2fc00f237319c1f8eceaa8021d 278 SUPERFAMILY SSF56784 1 276 7.69E-60 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_20170 fec3c210973f40bc9ccce03f2994041b 214 SUPERFAMILY SSF52218 1 208 3.22E-41 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_20170 fec3c210973f40bc9ccce03f2994041b 214 Gene3D G3DSA:3.40.50.360 1 207 5.4E-45 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_20170 fec3c210973f40bc9ccce03f2994041b 214 Pfam PF02525 Flavodoxin-like fold 1 202 5.4E-39 T 01-11-2018 IPR003680 Flavodoxin-like fold DOE78_20170 fec3c210973f40bc9ccce03f2994041b 214 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 204 22.671 T 01-11-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DOE78_10565 ae5ce1d8e980008945d29d5e361e3bdb 399 SUPERFAMILY SSF56796 23 395 1.24E-112 T 01-11-2018 DOE78_10565 ae5ce1d8e980008945d29d5e361e3bdb 399 Gene3D G3DSA:3.40.50.1970 11 200 2.3E-55 T 01-11-2018 DOE78_10565 ae5ce1d8e980008945d29d5e361e3bdb 399 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_10565 ae5ce1d8e980008945d29d5e361e3bdb 399 Gene3D G3DSA:1.20.1090.10 202 397 3.8E-58 T 01-11-2018 DOE78_10565 ae5ce1d8e980008945d29d5e361e3bdb 399 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 389 4.5E-111 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DOE78_07015 982c0b3257e97dbec59da72c57087709 258 Gene3D G3DSA:3.60.110.10 1 258 8.6E-94 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_07015 982c0b3257e97dbec59da72c57087709 258 Pfam PF00795 Carbon-nitrogen hydrolase 2 244 2.8E-50 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DOE78_07015 982c0b3257e97dbec59da72c57087709 258 SUPERFAMILY SSF56317 1 258 9.55E-78 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.2E-30 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 PIRSF PIRSF002599 1 66 4.2E-24 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 01-11-2018 IPR019844 Cold-shock conserved site DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 PRINTS PR00050 Cold shock protein signature 39 57 4.8E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 PRINTS PR00050 Cold shock protein signature 24 33 4.8E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 PRINTS PR00050 Cold shock protein signature 4 19 4.8E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 SMART SM00357 3 66 2.8E-31 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 Gene3D G3DSA:2.40.50.140 1 66 1.3E-30 T 01-11-2018 DOE78_15710 7815e6ba71cc9454568ace5b5551dce5 66 SUPERFAMILY SSF50249 1 65 1.39E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 SUPERFAMILY SSF51604 124 358 2.23E-61 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 Gene3D G3DSA:3.30.390.10 11 357 2.5E-129 T 01-11-2018 IPR029017 Enolase-like, N-terminal DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 359 44.216 T 01-11-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 SMART SM00922 142 234 6.0E-17 T 01-11-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 Pfam PF13378 Enolase C-terminal domain-like 149 353 3.7E-44 T 01-11-2018 IPR029065 Enolase C-terminal domain-like DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 Gene3D G3DSA:3.20.20.120 118 346 2.5E-129 T 01-11-2018 IPR036849 Enolase-like, C-terminal domain superfamily DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 11 332 4.4E-122 T 01-11-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 SUPERFAMILY SSF54826 1 126 1.53E-33 T 01-11-2018 DOE78_19575 fffb7e77f88ba6d4eb6eec27543f306e 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 125 8.8E-14 T 01-11-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DOE78_03115 c7f3b96ebdc3bcc9a9f3db9da9b30d46 77 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 49 8.6E-9 T 01-11-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 DOE78_03115 c7f3b96ebdc3bcc9a9f3db9da9b30d46 77 Pfam PF12728 Helix-turn-helix domain 2 34 6.2E-7 T 01-11-2018 DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 SMART SM00052 532 775 6.7E-95 T 01-11-2018 IPR001633 EAL domain DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 Pfam PF00990 Diguanylate cyclase, GGDEF domain 368 518 6.8E-40 T 01-11-2018 IPR000160 GGDEF domain DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 Gene3D G3DSA:3.20.20.450 536 783 3.2E-88 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 SMART SM00091 246 311 7.8E-8 T 01-11-2018 IPR000014 PAS domain DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 SUPERFAMILY SSF55073 373 524 2.9E-45 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 SUPERFAMILY SSF141868 537 782 4.18E-80 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 Pfam PF00563 EAL domain 538 770 1.1E-67 T 01-11-2018 IPR001633 EAL domain DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 Gene3D G3DSA:3.30.450.20 238 363 5.6E-22 T 01-11-2018 DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 521 3.5E-33 T 01-11-2018 IPR000160 GGDEF domain DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 248 363 4.2E-20 T 01-11-2018 IPR000014 PAS domain DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 SMART SM00267 357 522 9.3E-56 T 01-11-2018 IPR000160 GGDEF domain DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 Gene3D G3DSA:3.30.70.270 364 535 2.1E-55 T 01-11-2018 DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 SUPERFAMILY SSF55785 239 355 2.09E-18 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_22265 5079a5bd9c3802bf3d465fe73fa1c56f 787 Pfam PF13426 PAS domain 256 356 6.7E-13 T 01-11-2018 IPR000014 PAS domain DOE78_24145 8175e539749f5ff9630af525f3c7534a 371 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 8 367 1.1E-150 T 01-11-2018 IPR027634 Radical SAM protein, BA_1875 family DOE78_24145 8175e539749f5ff9630af525f3c7534a 371 PIRSF PIRSF037420 4 371 1.1E-97 T 01-11-2018 IPR017200 Coenzyme PQQ synthesis protein E DOE78_24145 8175e539749f5ff9630af525f3c7534a 371 Gene3D G3DSA:3.20.20.70 9 315 5.0E-41 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_24145 8175e539749f5ff9630af525f3c7534a 371 SUPERFAMILY SSF102114 14 344 3.14E-60 T 01-11-2018 DOE78_24145 8175e539749f5ff9630af525f3c7534a 371 Pfam PF04055 Radical SAM superfamily 20 177 8.2E-15 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_21485 7f092503e8203d95e09e9855937aba4e 249 Gene3D G3DSA:3.40.50.10490 1 239 2.6E-84 T 01-11-2018 DOE78_21485 7f092503e8203d95e09e9855937aba4e 249 Pfam PF13580 SIS domain 4 139 1.4E-45 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_21485 7f092503e8203d95e09e9855937aba4e 249 Hamap MF_01240 UPF0309 protein . 1 243 39.578 T 01-11-2018 IPR022951 Uncharacterised protein family UPF0309 DOE78_21485 7f092503e8203d95e09e9855937aba4e 249 SUPERFAMILY SSF53697 2 201 1.38E-25 T 01-11-2018 DOE78_10310 771cba14d723187620cc2fb354d57369 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.8E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_10310 771cba14d723187620cc2fb354d57369 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.8E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_10310 771cba14d723187620cc2fb354d57369 331 SUPERFAMILY SSF53822 57 317 1.8E-59 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_10310 771cba14d723187620cc2fb354d57369 331 SUPERFAMILY SSF47413 1 58 3.27E-14 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_10310 771cba14d723187620cc2fb354d57369 331 Gene3D G3DSA:1.10.260.40 1 58 2.8E-17 T 01-11-2018 DOE78_10310 771cba14d723187620cc2fb354d57369 331 SMART SM00354 1 70 3.2E-26 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_10310 771cba14d723187620cc2fb354d57369 331 Pfam PF13377 Periplasmic binding protein-like domain 167 323 2.4E-26 T 01-11-2018 DOE78_10310 771cba14d723187620cc2fb354d57369 331 Gene3D G3DSA:3.40.50.2300 64 305 2.7E-66 T 01-11-2018 DOE78_10310 771cba14d723187620cc2fb354d57369 331 Gene3D G3DSA:3.40.50.2300 161 282 2.7E-66 T 01-11-2018 DOE78_10310 771cba14d723187620cc2fb354d57369 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 5.5E-14 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SUPERFAMILY SSF50249 186 270 2.86E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 81 100 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 325 343 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 208 229 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 151 171 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 16 34 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 105 121 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 122 139 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 PRINTS PR00681 Ribosomal protein S1 signature 286 305 3.5E-51 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Gene3D G3DSA:2.40.50.140 93 170 1.1E-12 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SMART SM00316 271 342 3.4E-24 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SMART SM00316 100 167 4.2E-10 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SMART SM00316 186 256 9.6E-28 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SMART SM00316 14 84 2.2E-13 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SUPERFAMILY SSF50249 8 109 2.83E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Pfam PF00575 S1 RNA binding domain 98 167 2.0E-16 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Pfam PF00575 S1 RNA binding domain 270 342 1.6E-20 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Pfam PF00575 S1 RNA binding domain 13 83 6.7E-12 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Pfam PF00575 S1 RNA binding domain 186 256 2.7E-26 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Gene3D G3DSA:2.40.50.140 3 92 2.8E-17 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SUPERFAMILY SSF50249 254 356 9.29E-23 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 SUPERFAMILY SSF50249 85 169 1.34E-16 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Gene3D G3DSA:2.40.50.140 267 352 6.7E-26 T 01-11-2018 DOE78_16165 447c138acd699e3defa8244cee5a83f1 378 Gene3D G3DSA:2.40.50.140 183 265 2.0E-29 T 01-11-2018 DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 SMART SM00382 300 494 1.3E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 SMART SM00382 44 233 9.2E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 Pfam PF00005 ABC transporter 291 445 8.6E-24 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 SUPERFAMILY SSF52540 18 244 2.55E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 Gene3D G3DSA:3.40.50.300 261 514 1.3E-51 T 01-11-2018 DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 Gene3D G3DSA:3.40.50.300 2 254 6.3E-60 T 01-11-2018 DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 Pfam PF00005 ABC transporter 35 186 1.1E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 SUPERFAMILY SSF52540 283 506 1.3E-51 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08970 72163d294344f1edf2f70ba8514baeac 518 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 Gene3D G3DSA:3.90.1150.10 24 386 5.3E-153 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 Gene3D G3DSA:3.40.640.10 59 307 5.3E-153 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 PIRSF PIRSF000521 176 398 5.7E-33 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 PIRSF PIRSF000521 1 161 1.6E-9 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 Pfam PF00202 Aminotransferase class-III 17 396 2.1E-135 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 Hamap MF_01689 Ornithine aminotransferase [rocD]. 5 397 66.885 T 01-11-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 SUPERFAMILY SSF53383 2 397 7.26E-128 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_20760 a5b7a8cd21b034dea8e64ab4bca0c60b 398 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 5 396 9.8E-167 T 01-11-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.4E-113 T 01-11-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 01-11-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 43.752 T 01-11-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 Gene3D G3DSA:3.40.50.10490 10 214 2.2E-95 T 01-11-2018 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 Gene3D G3DSA:1.10.287.610 97 152 2.2E-95 T 01-11-2018 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 01-11-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.4E-42 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.4E-42 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.4E-42 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.4E-42 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.4E-42 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.4E-42 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 Pfam PF00318 Ribosomal protein S2 9 224 1.3E-101 T 01-11-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_08320 7787b278f13ecdb64bba68903a8bf9fc 232 SUPERFAMILY SSF52313 6 227 6.28E-100 T 01-11-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DOE78_12150 2f82e74b28ebf5aef8b3344b5a01b1bb 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 15 362 2.6E-13 T 01-11-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DOE78_12150 2f82e74b28ebf5aef8b3344b5a01b1bb 367 Gene3D G3DSA:3.20.20.210 6 367 1.3E-119 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_12150 2f82e74b28ebf5aef8b3344b5a01b1bb 367 SUPERFAMILY SSF51726 12 367 1.31E-78 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 110 2.5E-23 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 Gene3D G3DSA:3.20.190.10 2 128 1.3E-28 T 01-11-2018 IPR035937 MutM-like, N-terminal DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 SUPERFAMILY SSF81624 2 135 3.27E-27 T 01-11-2018 IPR035937 MutM-like, N-terminal DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 SMART SM00898 2 115 1.4E-23 T 01-11-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 SUPERFAMILY SSF46946 130 218 2.75E-21 T 01-11-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 SUPERFAMILY SSF57716 222 268 5.42E-9 T 01-11-2018 DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 SMART SM01232 129 221 1.5E-19 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 Gene3D G3DSA:1.10.8.50 131 270 1.3E-34 T 01-11-2018 DOE78_03205 15d5fa49ebed1950a10a89bdca73f2b4 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 212 3.5E-17 T 01-11-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Gene3D G3DSA:3.90.480.10 535 619 2.6E-6 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.3E-21 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.3E-21 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-21 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.3E-21 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.3E-21 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 553 615 9.3E-12 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 623 757 2.7E-19 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PIRSF PIRSF037149 1 779 3.2E-297 T 01-11-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 779 9.7E-301 T 01-11-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 SUPERFAMILY SSF55124 515 615 3.11E-17 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 SUPERFAMILY SSF51905 2 192 3.89E-44 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Pfam PF04324 BFD-like [2Fe-2S] binding domain 413 462 8.3E-14 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Pfam PF04324 BFD-like [2Fe-2S] binding domain 479 529 8.4E-11 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Gene3D G3DSA:1.10.10.1100 413 466 4.0E-9 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.4E-11 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.4E-11 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 1.4E-11 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.4E-11 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 SUPERFAMILY SSF51905 147 303 4.96E-29 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Gene3D G3DSA:3.30.390.30 317 398 8.6E-12 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 SUPERFAMILY SSF56014 625 767 4.32E-32 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Gene3D G3DSA:3.50.50.60 110 244 3.9E-91 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Gene3D G3DSA:3.30.413.10 622 783 1.4E-24 T 01-11-2018 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 279 1.6E-61 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_04995 b00caf34af0aadc8feff0ffca045cccc 786 Gene3D G3DSA:3.50.50.60 7 280 3.9E-91 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 SUPERFAMILY SSF56719 30 485 7.98E-169 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Gene3D G3DSA:2.120.10.90 499 815 3.0E-109 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 801 1.9E-273 T 01-11-2018 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 SUPERFAMILY SSF101904 499 811 1.07E-95 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Gene3D G3DSA:3.90.199.10 31 485 1.5E-198 T 01-11-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 755 2.3E-7 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 504 525 0.24 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 598 8.7E-6 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 607 647 5.4E-7 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 699 4.2E-10 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 8 746 0.0 T 01-11-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 SMART SM00434 10 463 1.9E-258 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 470 5.1E-151 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Gene3D G3DSA:1.10.268.10 368 456 1.5E-198 T 01-11-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 804 33.639 T 01-11-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DOE78_13550 8695bbb53f90c7001cf5232a88b3e30d 815 Gene3D G3DSA:3.30.1360.40 235 331 1.5E-198 T 01-11-2018 DOE78_08655 5e53d89d8068a907d0f7e1126dac944b 135 SMART SM00422 13 81 1.8E-27 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_08655 5e53d89d8068a907d0f7e1126dac944b 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_08655 5e53d89d8068a907d0f7e1126dac944b 135 Gene3D G3DSA:1.10.1660.10 3 84 2.1E-25 T 01-11-2018 DOE78_08655 5e53d89d8068a907d0f7e1126dac944b 135 Pfam PF13411 MerR HTH family regulatory protein 14 79 4.5E-18 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_08655 5e53d89d8068a907d0f7e1126dac944b 135 SUPERFAMILY SSF46955 13 110 2.47E-19 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Gene3D G3DSA:2.30.40.20 29 82 8.6E-59 T 01-11-2018 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 251 350 2.8E-18 T 01-11-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Gene3D G3DSA:1.10.150.20 176 244 2.6E-14 T 01-11-2018 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Pfam PF11798 IMS family HHH motif 176 205 7.0E-8 T 01-11-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 PIRSF PIRSF036603 127 422 3.4E-19 T 01-11-2018 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 PIRSF PIRSF036603 4 124 1.6E-26 T 01-11-2018 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 SUPERFAMILY SSF100879 250 350 1.96E-23 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Pfam PF00817 impB/mucB/samB family 15 162 3.7E-50 T 01-11-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Hamap MF_01113 DNA polymerase IV [dinB]. 9 361 37.433 T 01-11-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Gene3D G3DSA:3.30.1490.100 251 358 1.9E-24 T 01-11-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 SUPERFAMILY SSF56672 6 242 7.65E-80 T 01-11-2018 DOE78_16695 9ef8a3d1333cae094fbc2b21a2e5e2b9 424 Gene3D G3DSA:3.30.70.270 12 172 8.6E-59 T 01-11-2018 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 3.0E-246 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.7E-36 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.7E-36 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 1.7E-36 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 1.7E-36 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 1.7E-36 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 554 2.4E-210 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 Pfam PF05746 DALR anticodon binding domain 588 679 6.4E-6 T 01-11-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 SUPERFAMILY SSF109604 337 491 4.71E-15 T 01-11-2018 DOE78_17370 b5644b4aabb938ff92877afb32c0855a 691 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.628 T 01-11-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 SMART SM00487 12 207 1.2E-27 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 Gene3D G3DSA:3.40.50.300 2 197 1.3E-68 T 01-11-2018 DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 Pfam PF00270 DEAD/DEAH box helicase 20 177 2.8E-20 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 Pfam PF16124 RecQ zinc-binding 410 461 2.8E-6 T 01-11-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 SMART SM00490 241 323 7.1E-24 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 339 1.2E-109 T 01-11-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 130 139 - T 01-11-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 SUPERFAMILY SSF52540 23 335 3.6E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16260 eeb613c39392517de7236f8b28bcf3ef 500 Pfam PF00271 Helicase conserved C-terminal domain 227 322 7.3E-18 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_02975 b43c324503ea9aab6b26b06f756e0910 122 Gene3D G3DSA:3.10.180.10 9 121 1.4E-28 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_02975 b43c324503ea9aab6b26b06f756e0910 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 119 8.1E-6 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_02975 b43c324503ea9aab6b26b06f756e0910 122 SUPERFAMILY SSF54593 6 120 4.68E-17 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Gene3D G3DSA:1.10.1780.10 1 150 2.9E-62 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 3.2E-16 T 01-11-2018 IPR004176 Clp, N-terminal DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.0E-18 T 01-11-2018 IPR004176 Clp, N-terminal DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Gene3D G3DSA:3.40.50.300 490 712 7.5E-91 T 01-11-2018 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 SUPERFAMILY SSF52540 161 468 2.08E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 708 3.3E-57 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Pfam PF02151 UvrB/uvrC motif 418 452 1.1E-6 T 01-11-2018 IPR001943 UVR domain GO:0005515 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 SUPERFAMILY SSF81923 5 146 3.14E-32 T 01-11-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 1.3E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 1.3E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 1.3E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 1.3E-42 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Gene3D G3DSA:3.40.50.300 152 343 9.7E-73 T 01-11-2018 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Gene3D G3DSA:1.10.8.60 346 481 6.1E-54 T 01-11-2018 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 SUPERFAMILY SSF52540 486 800 4.78E-84 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Gene3D G3DSA:4.10.860.10 409 467 6.1E-54 T 01-11-2018 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Gene3D G3DSA:1.10.8.60 714 807 7.0E-29 T 01-11-2018 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 793 6.9E-28 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 SMART SM01086 714 803 5.5E-41 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 SMART SM00382 537 681 1.2E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 SMART SM00382 200 345 4.5E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 320 1.5E-13 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_00565 758fb67a9f040dc9249c5ded168f16c1 811 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 DOE78_18140 66e758871e43db3735c8b00b50af27b8 305 Gene3D G3DSA:1.10.3720.10 90 298 9.1E-20 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_18140 66e758871e43db3735c8b00b50af27b8 305 SUPERFAMILY SSF161098 94 284 2.09E-23 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_18140 66e758871e43db3735c8b00b50af27b8 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 301 7.4E-29 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_18140 66e758871e43db3735c8b00b50af27b8 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 67 5.8E-11 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 Gene3D G3DSA:3.90.226.10 262 516 1.1E-91 T 01-11-2018 DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 96 110 1.0E-5 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 148 1.0E-5 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 195 206 1.0E-5 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 SUPERFAMILY SSF52096 244 516 4.23E-90 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 SUPERFAMILY SSF52096 4 257 2.99E-80 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 Pfam PF01039 Carboxyl transferase domain 29 514 2.6E-197 T 01-11-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DOE78_16710 1abe1a80b5a54c1caeccd95a7c83e835 516 Gene3D G3DSA:3.90.226.10 2 258 2.8E-97 T 01-11-2018 DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 Gene3D G3DSA:3.90.400.10 105 174 1.7E-210 T 01-11-2018 DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 SUPERFAMILY SSF51445 4 476 3.43E-162 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 Pfam PF00128 Alpha amylase, catalytic domain 28 375 1.8E-127 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 SMART SM00642 13 418 1.6E-170 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 Gene3D G3DSA:2.60.40.1180 480 557 4.4E-25 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 Gene3D G3DSA:3.20.20.80 5 471 1.7E-210 T 01-11-2018 DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 SUPERFAMILY SSF51011 479 556 9.77E-20 T 01-11-2018 DOE78_24155 bf7059fe563d39e17545b36d16d79468 558 Pfam PF16657 Maltogenic Amylase, C-terminal domain 479 553 4.0E-10 T 01-11-2018 IPR032091 Maltogenic Amylase, C-terminal DOE78_07475 e3f1b0953ba59daeb9f2fed1a2a7c7be 310 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 28 307 3.1E-95 T 01-11-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DOE78_07475 e3f1b0953ba59daeb9f2fed1a2a7c7be 310 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 86 108 - T 01-11-2018 IPR030470 UbiA prenyltransferase conserved site DOE78_07475 e3f1b0953ba59daeb9f2fed1a2a7c7be 310 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 26 309 18.556 T 01-11-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DOE78_07475 e3f1b0953ba59daeb9f2fed1a2a7c7be 310 Pfam PF01040 UbiA prenyltransferase family 43 293 9.1E-59 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DOE78_07475 e3f1b0953ba59daeb9f2fed1a2a7c7be 310 Gene3D G3DSA:1.10.357.140 34 194 7.8E-17 T 01-11-2018 DOE78_12695 507bca759da664db236a70e2e76d6759 509 Gene3D G3DSA:1.20.1720.10 12 219 6.6E-50 T 01-11-2018 DOE78_12695 507bca759da664db236a70e2e76d6759 509 SUPERFAMILY SSF103473 198 501 2.35E-32 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_12695 507bca759da664db236a70e2e76d6759 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 479 1.0E-77 T 01-11-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DOE78_12695 507bca759da664db236a70e2e76d6759 509 SUPERFAMILY SSF103473 7 191 8.5E-43 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_12695 507bca759da664db236a70e2e76d6759 509 Pfam PF07690 Major Facilitator Superfamily 199 407 1.1E-16 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_12695 507bca759da664db236a70e2e76d6759 509 Pfam PF07690 Major Facilitator Superfamily 16 194 2.9E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:3.20.20.70 519 728 1.0E-11 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.40.1180 1928 2076 2.8E-34 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_13585 273322b109ed476084145a6be721de1f 2085 SUPERFAMILY SSF51445 389 726 7.15E-27 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.40.1180 1878 1926 1.4E-15 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_13585 273322b109ed476084145a6be721de1f 2085 Pfam PF02018 Carbohydrate binding domain 286 405 2.5E-6 T 01-11-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Pfam PF13802 Galactose mutarotase-like 1408 1467 1.6E-6 T 01-11-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain DOE78_13585 273322b109ed476084145a6be721de1f 2085 SUPERFAMILY SSF51011 1848 1927 3.67E-22 T 01-11-2018 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.120.260 825 959 4.4E-23 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_13585 273322b109ed476084145a6be721de1f 2085 Pfam PF16338 Domain of unknown function (DUF4968) 1294 1384 1.4E-16 T 01-11-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Pfam PF17137 Domain of unknown function (DUF5110) 1947 2018 1.3E-18 T 01-11-2018 IPR033403 Domain of unknown function DUF5110 DOE78_13585 273322b109ed476084145a6be721de1f 2085 SUPERFAMILY SSF74650 1292 1499 2.48E-31 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:3.20.20.80 1502 1877 2.2E-127 T 01-11-2018 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.40.1180 744 824 7.9E-16 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_13585 273322b109ed476084145a6be721de1f 2085 SUPERFAMILY SSF51011 738 821 5.58E-15 T 01-11-2018 DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.40.1760 1285 1497 3.0E-40 T 01-11-2018 DOE78_13585 273322b109ed476084145a6be721de1f 2085 SUPERFAMILY SSF51445 1506 1842 2.2E-75 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.120.260 129 274 4.0E-14 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.120.260 1134 1269 4.8E-15 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.120.260 284 431 3.7E-19 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_13585 273322b109ed476084145a6be721de1f 2085 Gene3D G3DSA:2.60.120.260 960 1123 2.0E-16 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_13585 273322b109ed476084145a6be721de1f 2085 Pfam PF01055 Glycosyl hydrolases family 31 1493 1931 1.3E-132 T 01-11-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DOE78_13585 273322b109ed476084145a6be721de1f 2085 SUPERFAMILY SSF49785 829 957 1.98E-11 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_01045 25012521ac26608e1995b738b8f2675b 378 SUPERFAMILY SSF52821 7 115 6.16E-19 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01045 25012521ac26608e1995b738b8f2675b 378 Gene3D G3DSA:3.40.250.10 2 116 1.2E-20 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01045 25012521ac26608e1995b738b8f2675b 378 SMART SM00849 135 297 4.0E-28 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_01045 25012521ac26608e1995b738b8f2675b 378 Gene3D G3DSA:3.60.15.10 125 360 1.2E-49 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_01045 25012521ac26608e1995b738b8f2675b 378 SUPERFAMILY SSF56281 129 373 1.44E-43 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_01045 25012521ac26608e1995b738b8f2675b 378 SMART SM00450 11 114 6.6E-15 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01045 25012521ac26608e1995b738b8f2675b 378 Pfam PF00753 Metallo-beta-lactamase superfamily 135 276 6.2E-9 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_01045 25012521ac26608e1995b738b8f2675b 378 Pfam PF00581 Rhodanese-like domain 14 110 1.2E-11 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01540 9f71775bb79c0d375592fc123031897e 419 Gene3D G3DSA:3.30.565.10 260 412 3.8E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_01540 9f71775bb79c0d375592fc123031897e 419 SUPERFAMILY SSF55874 263 409 1.13E-25 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_01540 9f71775bb79c0d375592fc123031897e 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 411 6.3E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_01540 9f71775bb79c0d375592fc123031897e 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 409 2.3E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_01540 9f71775bb79c0d375592fc123031897e 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 365 2.3E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_01540 9f71775bb79c0d375592fc123031897e 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 389 2.3E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_01540 9f71775bb79c0d375592fc123031897e 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 351 2.3E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_01540 9f71775bb79c0d375592fc123031897e 419 SMART SM00387 300 412 5.3E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_22365 d81ee5a3b98e53097e970105cacd6e9a 170 Pfam PF07681 DoxX 16 116 9.2E-10 T 01-11-2018 IPR032808 DoxX family DOE78_17290 f097fa9ea9b82bda4ac6891244866068 262 Pfam PF00005 ABC transporter 20 168 1.1E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_17290 f097fa9ea9b82bda4ac6891244866068 262 SMART SM00382 29 224 7.3E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_17290 f097fa9ea9b82bda4ac6891244866068 262 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_17290 f097fa9ea9b82bda4ac6891244866068 262 Gene3D G3DSA:3.40.50.300 1 255 1.3E-66 T 01-11-2018 DOE78_17290 f097fa9ea9b82bda4ac6891244866068 262 SUPERFAMILY SSF52540 3 227 8.62E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 314 2.8E-19 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 01-11-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 Gene3D G3DSA:3.40.50.720 37 311 4.5E-73 T 01-11-2018 DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 282 7.8E-40 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 Gene3D G3DSA:3.30.70.260 316 399 3.7E-17 T 01-11-2018 DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 SUPERFAMILY SSF55021 318 390 2.46E-13 T 01-11-2018 DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 SUPERFAMILY SSF52283 24 112 6.8E-22 T 01-11-2018 DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 SUPERFAMILY SSF51735 94 282 5.27E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_24525 ceff5b0c9c71ffb148305840a9e4a797 399 Gene3D G3DSA:3.40.50.720 92 286 4.5E-73 T 01-11-2018 DOE78_01490 495da42dbd813ade48c84035b3112489 157 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 22 153 2.4E-46 T 01-11-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DOE78_01490 495da42dbd813ade48c84035b3112489 157 Gene3D G3DSA:3.40.630.30 15 157 1.5E-45 T 01-11-2018 DOE78_01490 495da42dbd813ade48c84035b3112489 157 Pfam PF00583 Acetyltransferase (GNAT) family 24 133 1.5E-20 T 01-11-2018 IPR000182 GNAT domain DOE78_01490 495da42dbd813ade48c84035b3112489 157 SUPERFAMILY SSF55729 13 157 5.95E-36 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_15760 ce19080965e55ce527f0e6ad9de85a13 1222 SUPERFAMILY SSF52540 632 916 4.39E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15760 ce19080965e55ce527f0e6ad9de85a13 1222 SUPERFAMILY SSF52540 32 260 4.18E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15760 ce19080965e55ce527f0e6ad9de85a13 1222 Gene3D G3DSA:3.40.50.300 50 287 3.2E-40 T 01-11-2018 DOE78_15760 ce19080965e55ce527f0e6ad9de85a13 1222 Pfam PF00350 Dynamin family 640 867 1.9E-42 T 01-11-2018 IPR022812 Dynamin superfamily DOE78_15760 ce19080965e55ce527f0e6ad9de85a13 1222 Pfam PF00350 Dynamin family 50 204 5.9E-26 T 01-11-2018 IPR022812 Dynamin superfamily DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 21 159 3.6E-64 T 01-11-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 SUPERFAMILY SSF46906 85 158 7.33E-27 T 01-11-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 Gene3D G3DSA:1.10.10.250 90 158 4.0E-29 T 01-11-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 SMART SM00649 27 158 1.5E-85 T 01-11-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 54 91 2.0E-15 T 01-11-2018 DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 SUPERFAMILY SSF54747 21 90 2.88E-29 T 01-11-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 Pfam PF00298 Ribosomal protein L11, RNA binding domain 89 157 8.7E-26 T 01-11-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 23 159 30.924 T 01-11-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 ProSitePatterns PS00359 Ribosomal protein L11 signature. 144 159 - T 01-11-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 Gene3D G3DSA:3.30.1550.10 20 89 3.2E-33 T 01-11-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DOE78_00640 60187f90fed3a49f9b1eddfdeee97a3b 159 Pfam PF03946 Ribosomal protein L11, N-terminal domain 27 84 2.1E-29 T 01-11-2018 IPR020784 Ribosomal protein L11, N-terminal DOE78_04560 3386b9be1a8d9b7bcaaea0a33694c054 236 SUPERFAMILY SSF53335 30 180 4.49E-6 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_04560 3386b9be1a8d9b7bcaaea0a33694c054 236 Gene3D G3DSA:3.40.50.150 26 235 1.8E-6 T 01-11-2018 DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 SUPERFAMILY SSF52242 42 137 8.63E-9 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 SMART SM00729 177 380 5.5E-23 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 Gene3D G3DSA:3.40.50.280 18 137 1.2E-11 T 01-11-2018 DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 Gene3D G3DSA:3.80.30.20 175 373 1.5E-19 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 Pfam PF04055 Radical SAM superfamily 181 345 5.5E-14 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 SUPERFAMILY SSF102114 155 380 1.44E-37 T 01-11-2018 DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 Pfam PF02310 B12 binding domain 9 122 2.8E-21 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_06975 7ac4ae841872c20ae57518d298e68759 581 Pfam PF13311 Protein of unknown function (DUF4080) 373 551 2.3E-43 T 01-11-2018 IPR025288 Domain of unknown function DUF4080 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 Pfam PF01016 Ribosomal L27 protein 10 89 8.6E-34 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 1.1E-39 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 1.0E-15 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 PRINTS PR00063 Ribosomal protein L27 signature 37 61 6.8E-38 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 PRINTS PR00063 Ribosomal protein L27 signature 62 86 6.8E-38 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 PRINTS PR00063 Ribosomal protein L27 signature 12 36 6.8E-38 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 01-11-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 Gene3D G3DSA:2.40.50.100 28 93 1.4E-25 T 01-11-2018 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 26.62 T 01-11-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17925 cbb75257f4562f4a151f9ad27db9b106 96 SUPERFAMILY SSF110324 10 91 1.67E-31 T 01-11-2018 DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 PIRSF PIRSF000183 1 371 6.9E-191 T 01-11-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 SMART SM01003 4 136 1.5E-76 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 SMART SM01002 148 297 4.3E-89 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 Gene3D G3DSA:3.40.50.720 129 305 8.3E-141 T 01-11-2018 DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 01-11-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 7.9E-46 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 01-11-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 4.1E-86 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 Gene3D G3DSA:3.40.50.720 3 353 8.3E-141 T 01-11-2018 DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 SUPERFAMILY SSF51735 136 303 7.9E-48 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 SUPERFAMILY SSF52283 1 360 6.46E-69 T 01-11-2018 DOE78_18550 d91096a638d0e2a4c26d8b5b61fd71e3 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 2.0E-179 T 01-11-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 SUPERFAMILY SSF52540 162 466 1.18E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 Gene3D G3DSA:3.40.50.280 8 150 3.1E-59 T 01-11-2018 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 Pfam PF02310 B12 binding domain 14 112 1.4E-11 T 01-11-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 718 1087 2.9E-91 T 01-11-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 Hamap MF_02050 Fused isobutyryl-CoA mutase [icmF]. 12 1088 17.172 T 01-11-2018 IPR033669 Fused isobutyryl-CoA mutase GO:0003924|GO:0005525|GO:0006637|GO:0031419|GO:0034784|GO:0047727 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 Pfam PF01642 Methylmalonyl-CoA mutase 563 1082 3.7E-143 T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 SUPERFAMILY SSF51703 505 1084 4.19E-152 T 01-11-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 11 124 2.8E-16 T 01-11-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 Gene3D G3DSA:3.20.20.240 491 1088 2.0E-189 T 01-11-2018 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 SUPERFAMILY SSF52242 6 144 2.88E-42 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 Gene3D G3DSA:3.40.50.300 201 409 6.9E-61 T 01-11-2018 DOE78_23850 906c76a7407cdeb329b79d23861775f8 1088 Pfam PF03308 ArgK protein 168 403 1.1E-43 T 01-11-2018 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 SMART SM00382 192 331 6.7E-26 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 SUPERFAMILY SSF140990 410 606 2.88E-72 T 01-11-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 Gene3D G3DSA:1.20.58.760 410 608 3.2E-75 T 01-11-2018 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 108 600 1.4E-247 T 01-11-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 Gene3D G3DSA:1.10.8.60 330 407 1.6E-30 T 01-11-2018 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 SUPERFAMILY SSF52540 152 400 2.49E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 ProSitePatterns PS00674 AAA-protein family signature. 299 317 - T 01-11-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 Gene3D G3DSA:3.40.50.300 147 329 1.2E-71 T 01-11-2018 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 Pfam PF01434 Peptidase family M41 390 599 1.4E-87 T 01-11-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 196 328 1.1E-45 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 Pfam PF06480 FtsH Extracellular 9 95 3.3E-13 T 01-11-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DOE78_00405 0abd4be864dab63afde4ddf558f7b568 659 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 614 38.926 T 01-11-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DOE78_15500 667153ee5db183e334d62b3d390e6eff 192 SUPERFAMILY SSF52833 30 191 1.05E-41 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_15500 667153ee5db183e334d62b3d390e6eff 192 Gene3D G3DSA:3.40.30.10 22 191 4.2E-55 T 01-11-2018 DOE78_15500 667153ee5db183e334d62b3d390e6eff 192 Pfam PF02630 SCO1/SenC 12 174 2.6E-42 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_00355 12008815541bf986e1ca809ad0e818d3 101 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 18 101 8.3E-34 T 01-11-2018 IPR012504 Sporulation protein YabP DOE78_00355 12008815541bf986e1ca809ad0e818d3 101 Pfam PF07873 YabP family 18 83 1.2E-19 T 01-11-2018 IPR022476 Sporulation protein YabP/YqfC DOE78_00355 12008815541bf986e1ca809ad0e818d3 101 Gene3D G3DSA:2.60.40.2000 26 83 6.2E-24 T 01-11-2018 IPR038705 YabP superfamily DOE78_00355 12008815541bf986e1ca809ad0e818d3 101 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 17 101 4.0E-38 T 01-11-2018 IPR012504 Sporulation protein YabP DOE78_00355 12008815541bf986e1ca809ad0e818d3 101 PIRSF PIRSF011576 1 101 9.4E-53 T 01-11-2018 IPR012504 Sporulation protein YabP DOE78_21635 e12ecf2a11d09d7d3d3d5dc440702068 82 Gene3D G3DSA:2.40.50.100 1 75 7.6E-6 T 01-11-2018 DOE78_00870 fceec3b6e8ad46a73b68c24d86d898b8 279 SMART SM00382 32 217 2.2E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00870 fceec3b6e8ad46a73b68c24d86d898b8 279 Gene3D G3DSA:3.40.50.300 2 278 2.3E-82 T 01-11-2018 DOE78_00870 fceec3b6e8ad46a73b68c24d86d898b8 279 Pfam PF00005 ABC transporter 23 169 9.2E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_00870 fceec3b6e8ad46a73b68c24d86d898b8 279 SUPERFAMILY SSF52540 5 229 3.01E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00870 fceec3b6e8ad46a73b68c24d86d898b8 279 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 273 5.8E-122 T 01-11-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 DOE78_00870 fceec3b6e8ad46a73b68c24d86d898b8 279 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_01700 66c5555f0cad9000e085c85fd38463d0 446 Pfam PF00437 Type II/IV secretion system protein 96 371 1.2E-83 T 01-11-2018 IPR001482 Type II/IV secretion system protein DOE78_01700 66c5555f0cad9000e085c85fd38463d0 446 Gene3D G3DSA:3.40.50.300 191 415 2.8E-72 T 01-11-2018 DOE78_01700 66c5555f0cad9000e085c85fd38463d0 446 Gene3D G3DSA:3.30.450.380 19 190 9.6E-47 T 01-11-2018 DOE78_01700 66c5555f0cad9000e085c85fd38463d0 446 SUPERFAMILY SSF52540 76 381 1.13E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 Gene3D G3DSA:3.90.180.10 4 365 1.8E-127 T 01-11-2018 DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 140 2.7E-29 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 Pfam PF00107 Zinc-binding dehydrogenase 189 256 3.7E-8 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 1.7E-10 T 01-11-2018 IPR027399 Alcohol dehydrogenase GroES-associated DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 Gene3D G3DSA:3.40.50.720 169 338 1.8E-127 T 01-11-2018 DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 SMART SM00829 8 376 0.0092 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 SUPERFAMILY SSF51735 156 337 1.36E-47 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21720 411beeb470e7430ea4f72d011a515c5a 378 SUPERFAMILY SSF50129 1 177 3.35E-60 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 SMART SM00382 29 212 4.4E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 SUPERFAMILY SSF50331 237 364 3.16E-28 T 01-11-2018 IPR008995 Molybdate/tungstate binding, C-terminal DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 SUPERFAMILY SSF52540 4 243 5.32E-85 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 Pfam PF00005 ABC transporter 21 162 7.2E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 Pfam PF08402 TOBE domain 281 356 6.6E-7 T 01-11-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 Gene3D G3DSA:2.40.50.140 303 348 5.5E-38 T 01-11-2018 DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 Gene3D G3DSA:3.40.50.300 1 239 2.1E-74 T 01-11-2018 DOE78_05775 2cc616dca65bf372405da320ecca05bf 365 Gene3D G3DSA:2.40.50.100 240 361 5.5E-38 T 01-11-2018 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 Gene3D G3DSA:3.60.120.10 8 460 1.8E-170 T 01-11-2018 IPR005801 ADC synthase GO:0009058 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 153 6.0E-36 T 01-11-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 Pfam PF00425 chorismate binding enzyme 199 453 1.7E-100 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 PRINTS PR00095 Anthranilate synthase component I signature 395 409 2.2E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 PRINTS PR00095 Anthranilate synthase component I signature 410 424 2.2E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 PRINTS PR00095 Anthranilate synthase component I signature 301 314 2.2E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 PRINTS PR00095 Anthranilate synthase component I signature 315 328 2.2E-23 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 16 460 4.8E-181 T 01-11-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_15070 7837262ae7d7fcd4dc8dafbd515d3885 462 SUPERFAMILY SSF56322 10 459 7.2E-150 T 01-11-2018 IPR005801 ADC synthase GO:0009058 DOE78_15945 101fcac99d563bfd01e29c1ec67698a9 281 Pfam PF02569 Pantoate-beta-alanine ligase 2 277 2.0E-99 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DOE78_15945 101fcac99d563bfd01e29c1ec67698a9 281 Gene3D G3DSA:3.30.1300.10 178 277 3.0E-31 T 01-11-2018 DOE78_15945 101fcac99d563bfd01e29c1ec67698a9 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 278 2.6E-108 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DOE78_15945 101fcac99d563bfd01e29c1ec67698a9 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 38.152 T 01-11-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DOE78_15945 101fcac99d563bfd01e29c1ec67698a9 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 3.2E-8 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_15945 101fcac99d563bfd01e29c1ec67698a9 281 SUPERFAMILY SSF52374 1 279 1.5E-101 T 01-11-2018 DOE78_15945 101fcac99d563bfd01e29c1ec67698a9 281 Gene3D G3DSA:3.40.50.620 1 177 5.5E-74 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_14845 8c2079a8ba5b86f3998e262d9b6c209e 308 Pfam PF13411 MerR HTH family regulatory protein 10 78 3.1E-14 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_14845 8c2079a8ba5b86f3998e262d9b6c209e 308 SMART SM00422 10 80 4.1E-4 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_14845 8c2079a8ba5b86f3998e262d9b6c209e 308 SUPERFAMILY SSF46955 10 93 6.41E-11 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_14845 8c2079a8ba5b86f3998e262d9b6c209e 308 Gene3D G3DSA:1.10.1660.10 2 128 7.9E-16 T 01-11-2018 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 50.296 T 01-11-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.0E-33 T 01-11-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 Gene3D G3DSA:2.30.30.30 118 196 3.7E-36 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 SUPERFAMILY SSF50104 126 273 1.56E-62 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 1.8E-140 T 01-11-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.4E-58 T 01-11-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 PIRSF PIRSF002158 3 276 8.4E-101 T 01-11-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 SUPERFAMILY SSF50249 2 125 7.2E-52 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 Gene3D G3DSA:4.10.950.10 197 276 4.8E-37 T 01-11-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 SMART SM01383 42 118 3.9E-45 T 01-11-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 Gene3D G3DSA:2.40.50.140 1 114 3.1E-48 T 01-11-2018 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 SMART SM01382 124 253 6.2E-96 T 01-11-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DOE78_00740 3e50523e10f827c01dd1e05995fb043a 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 01-11-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_06425 e965d33151856e1e61e63f97869b5bb7 372 Pfam PF13353 4Fe-4S single cluster domain 15 122 4.2E-6 T 01-11-2018 DOE78_06425 e965d33151856e1e61e63f97869b5bb7 372 PIRSF PIRSF037420 2 372 1.0E-99 T 01-11-2018 IPR017200 Coenzyme PQQ synthesis protein E DOE78_06425 e965d33151856e1e61e63f97869b5bb7 372 Pfam PF04055 Radical SAM superfamily 18 174 1.9E-17 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_06425 e965d33151856e1e61e63f97869b5bb7 372 SUPERFAMILY SSF102114 10 341 6.41E-66 T 01-11-2018 DOE78_06425 e965d33151856e1e61e63f97869b5bb7 372 Gene3D G3DSA:3.20.20.70 5 322 7.0E-48 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_06425 e965d33151856e1e61e63f97869b5bb7 372 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 6 364 2.8E-159 T 01-11-2018 IPR027634 Radical SAM protein, BA_1875 family DOE78_06425 e965d33151856e1e61e63f97869b5bb7 372 Pfam PF13186 Iron-sulfur cluster-binding domain 279 333 6.0E-5 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 SUPERFAMILY SSF53383 1 357 1.42E-115 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 358 1.9E-158 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 Gene3D G3DSA:3.90.1150.10 257 358 8.9E-42 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 Pfam PF00266 Aminotransferase class-V 5 348 3.0E-51 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 Gene3D G3DSA:3.40.640.10 16 256 6.7E-89 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 PIRSF PIRSF000525 1 358 7.9E-155 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DOE78_05920 6aa6d64ff9b817f5d52a6e3cae218a88 358 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 48.519 T 01-11-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 SMART SM00968 519 638 4.3E-39 T 01-11-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 SUPERFAMILY SSF75553 484 686 1.12E-52 T 01-11-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 638 1.1E-28 T 01-11-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 SUPERFAMILY SSF52540 2 1164 4.35E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1172 2.9E-76 T 01-11-2018 IPR003395 RecF/RecN/SMC, N-terminal DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 PIRSF PIRSF005719 1 1187 0.0 T 01-11-2018 IPR024704 Structural maintenance of chromosomes protein DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1179 0.0 T 01-11-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1181 24.398 T 01-11-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 Gene3D G3DSA:1.20.1060.20 495 680 3.7E-65 T 01-11-2018 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 Gene3D G3DSA:3.40.50.300 866 1188 1.1E-52 T 01-11-2018 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 Gene3D G3DSA:3.40.50.300 1 248 2.1E-59 T 01-11-2018 DOE78_08030 7bec4d39fc7d756870de3e3769a3ab47 1188 Gene3D G3DSA:3.30.70.1620 579 667 3.7E-65 T 01-11-2018 DOE78_13885 6386e91aa5e964ccf7c74a86b1c1595d 312 Gene3D G3DSA:1.10.3720.10 69 311 1.5E-58 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13885 6386e91aa5e964ccf7c74a86b1c1595d 312 SUPERFAMILY SSF161098 73 298 2.75E-51 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13885 6386e91aa5e964ccf7c74a86b1c1595d 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 308 1.3E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_10940 108ad4b133eef13c3921d79b86b1e5fc 248 Pfam PF04794 YdjC-like protein 3 235 9.9E-63 T 01-11-2018 IPR006879 Carbohydrate deacetylase YdjC-like DOE78_10940 108ad4b133eef13c3921d79b86b1e5fc 248 SUPERFAMILY SSF88713 1 246 4.45E-76 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_10940 108ad4b133eef13c3921d79b86b1e5fc 248 Gene3D G3DSA:3.20.20.370 1 247 2.7E-87 T 01-11-2018 DOE78_10940 108ad4b133eef13c3921d79b86b1e5fc 248 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 2 243 38.62 T 01-11-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 DOE78_15555 c95feeedfe5c9d0bde18baa875d34ee8 302 Pfam PF08378 Nuclease-related domain 37 145 5.0E-14 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_20755 4ba580b8989b00bef16d53e00fe05139 77 Pfam PF04070 Domain of unknown function (DUF378) 3 61 3.6E-27 T 01-11-2018 IPR007211 Protein of unknown function DUF378 DOE78_02815 b1148d04a689b54a2f72df56e065b06b 256 PIRSF PIRSF033101 1 255 6.1E-61 T 01-11-2018 IPR011397 Uncharacterised conserved protein UCP033101 DOE78_02815 b1148d04a689b54a2f72df56e065b06b 256 Pfam PF10086 Putative membrane peptidase family (DUF2324) 17 236 1.1E-56 T 01-11-2018 IPR011397 Uncharacterised conserved protein UCP033101 DOE78_16480 b876ba313556562722ebff10735f0785 184 Gene3D G3DSA:3.90.79.10 5 183 3.5E-56 T 01-11-2018 DOE78_16480 b876ba313556562722ebff10735f0785 184 Pfam PF00293 NUDIX domain 43 157 3.4E-18 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_16480 b876ba313556562722ebff10735f0785 184 SUPERFAMILY SSF55811 8 179 1.29E-49 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_16480 b876ba313556562722ebff10735f0785 184 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 Gene3D G3DSA:3.40.50.720 95 276 9.5E-116 T 01-11-2018 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 310 1.3E-35 T 01-11-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 SUPERFAMILY SSF51735 95 279 3.15E-61 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 3.2E-64 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 SUPERFAMILY SSF143548 316 446 1.67E-33 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 524 4.9E-208 T 01-11-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 Gene3D G3DSA:3.40.50.720 5 302 9.5E-116 T 01-11-2018 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 01-11-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 SUPERFAMILY SSF52283 1 132 2.34E-33 T 01-11-2018 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 Pfam PF01842 ACT domain 453 511 2.4E-7 T 01-11-2018 IPR002912 ACT domain DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 Gene3D G3DSA:3.30.1330.90 315 450 1.1E-32 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 SUPERFAMILY SSF55021 440 521 2.71E-18 T 01-11-2018 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 Gene3D G3DSA:3.30.70.260 451 524 2.8E-22 T 01-11-2018 DOE78_16285 b74d053f3ce792218daaad16cfdfeb72 524 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 01-11-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DOE78_23650 0988de44e7b662b4ac25178beb8c1c50 337 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 217 230 - T 01-11-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23650 0988de44e7b662b4ac25178beb8c1c50 337 Pfam PF00146 NADH dehydrogenase 23 328 3.7E-126 T 01-11-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23650 0988de44e7b662b4ac25178beb8c1c50 337 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 14 334 25.17 T 01-11-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_12015 82a05798c723e4e44b11c77721d14522 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 275 1.6E-26 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12015 82a05798c723e4e44b11c77721d14522 282 Gene3D G3DSA:1.10.3720.10 70 276 8.9E-19 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12015 82a05798c723e4e44b11c77721d14522 282 SUPERFAMILY SSF161098 74 260 3.01E-22 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_14795 5c9fbfe6aee145912456de8358e1606c 312 SUPERFAMILY SSF52540 3 223 1.48E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14795 5c9fbfe6aee145912456de8358e1606c 312 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_14795 5c9fbfe6aee145912456de8358e1606c 312 Pfam PF00005 ABC transporter 22 163 4.2E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14795 5c9fbfe6aee145912456de8358e1606c 312 Gene3D G3DSA:3.40.50.300 1 242 4.7E-59 T 01-11-2018 DOE78_14795 5c9fbfe6aee145912456de8358e1606c 312 SMART SM00382 30 211 3.0E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24685 72d6100ba478d31bf98db7ec11f7b37b 253 PRINTS PR00091 Nitrogenase component II signature 31 46 7.2E-5 T 01-11-2018 DOE78_24685 72d6100ba478d31bf98db7ec11f7b37b 253 PRINTS PR00091 Nitrogenase component II signature 9 22 7.2E-5 T 01-11-2018 DOE78_24685 72d6100ba478d31bf98db7ec11f7b37b 253 Pfam PF13614 AAA domain 2 178 1.5E-73 T 01-11-2018 IPR025669 AAA domain DOE78_24685 72d6100ba478d31bf98db7ec11f7b37b 253 Gene3D G3DSA:3.40.50.300 1 252 3.6E-85 T 01-11-2018 DOE78_24685 72d6100ba478d31bf98db7ec11f7b37b 253 SUPERFAMILY SSF52540 2 252 4.47E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15280 983092156aba98dc6f96a62dd3027166 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15280 983092156aba98dc6f96a62dd3027166 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.5E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15280 983092156aba98dc6f96a62dd3027166 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.5E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15280 983092156aba98dc6f96a62dd3027166 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.5E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15280 983092156aba98dc6f96a62dd3027166 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15280 983092156aba98dc6f96a62dd3027166 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.5E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15280 983092156aba98dc6f96a62dd3027166 257 Gene3D G3DSA:3.40.50.720 1 256 1.7E-67 T 01-11-2018 DOE78_15280 983092156aba98dc6f96a62dd3027166 257 SUPERFAMILY SSF51735 3 248 1.5E-63 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_15280 983092156aba98dc6f96a62dd3027166 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 248 8.7E-48 T 01-11-2018 DOE78_16995 3d11416daef87b3d6484b98d418f6b20 268 Pfam PF02867 Ribonucleotide reductase, barrel domain 188 265 3.0E-14 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_16995 3d11416daef87b3d6484b98d418f6b20 268 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 131 180 3.7E-7 T 01-11-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_16995 3d11416daef87b3d6484b98d418f6b20 268 Gene3D G3DSA:3.20.70.20 120 268 1.8E-32 T 01-11-2018 DOE78_16995 3d11416daef87b3d6484b98d418f6b20 268 SUPERFAMILY SSF51998 128 265 1.31E-35 T 01-11-2018 DOE78_23340 697369407c98ea1914985f6d3619413f 277 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 174 7.9E-43 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23340 697369407c98ea1914985f6d3619413f 277 Gene3D G3DSA:3.40.630.40 1 182 7.7E-51 T 01-11-2018 DOE78_23340 697369407c98ea1914985f6d3619413f 277 SMART SM00646 64 174 9.8E-32 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23340 697369407c98ea1914985f6d3619413f 277 SUPERFAMILY SSF53187 1 179 5.02E-49 T 01-11-2018 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Gene3D G3DSA:1.10.287.130 232 310 7.2E-18 T 01-11-2018 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 307 1.3E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SUPERFAMILY SSF55785 11 114 3.14E-11 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SUPERFAMILY SSF55874 303 458 3.54E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SUPERFAMILY SSF55785 125 233 6.12E-23 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Gene3D G3DSA:3.30.450.20 109 230 1.1E-25 T 01-11-2018 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 2.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 2.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 2.3E-12 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Pfam PF08448 PAS fold 12 112 1.7E-6 T 01-11-2018 IPR013656 PAS fold-4 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Pfam PF08448 PAS fold 126 233 8.2E-13 T 01-11-2018 IPR013656 PAS fold-4 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 457 9.5E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SMART SM00091 120 186 9.2E-9 T 01-11-2018 IPR000014 PAS domain DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SMART SM00091 6 72 5.2E-7 T 01-11-2018 IPR000014 PAS domain DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SMART SM00086 191 232 0.0037 T 01-11-2018 IPR001610 PAC motif DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SUPERFAMILY SSF47384 243 309 1.37E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SMART SM00388 247 311 1.1E-10 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Gene3D G3DSA:3.30.450.20 4 108 5.3E-28 T 01-11-2018 DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 117 238 6.3E-25 T 01-11-2018 IPR000014 PAS domain DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 SMART SM00387 352 459 2.3E-28 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_00900 a4d9b502b4a588f3a2b9acb473537ad0 461 Gene3D G3DSA:3.30.565.10 314 459 1.6E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_11035 559a4c7d6e118c5e7a2ea62f4d96d5d4 105 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 102 25.859 T 01-11-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 DOE78_11035 559a4c7d6e118c5e7a2ea62f4d96d5d4 105 SUPERFAMILY SSF51182 11 102 3.25E-31 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_11035 559a4c7d6e118c5e7a2ea62f4d96d5d4 105 Gene3D G3DSA:2.60.120.10 1 103 2.1E-39 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_11035 559a4c7d6e118c5e7a2ea62f4d96d5d4 105 Pfam PF06865 Protein of unknown function (DUF1255) 12 101 1.5E-35 T 01-11-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 DOE78_08330 3b2a69fa59646ed06bfd3ea4ecfb5bc6 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 8.6E-104 T 01-11-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DOE78_08330 3b2a69fa59646ed06bfd3ea4ecfb5bc6 241 SUPERFAMILY SSF53633 4 238 1.44E-75 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_08330 3b2a69fa59646ed06bfd3ea4ecfb5bc6 241 PIRSF PIRSF005650 1 241 2.5E-99 T 01-11-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DOE78_08330 3b2a69fa59646ed06bfd3ea4ecfb5bc6 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 45.003 T 01-11-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DOE78_08330 3b2a69fa59646ed06bfd3ea4ecfb5bc6 241 Pfam PF00696 Amino acid kinase family 7 217 3.0E-29 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DOE78_08330 3b2a69fa59646ed06bfd3ea4ecfb5bc6 241 Gene3D G3DSA:3.40.1160.10 1 240 1.8E-83 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 SUPERFAMILY SSF56014 627 791 2.36E-48 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 SUPERFAMILY SSF51905 3 305 3.43E-43 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Gene3D G3DSA:3.30.390.30 317 397 2.0E-11 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 556 618 9.7E-13 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 283 1.4E-59 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Gene3D G3DSA:1.10.10.1100 416 471 3.2E-10 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Gene3D G3DSA:3.50.50.60 8 303 5.3E-91 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PIRSF PIRSF037149 1 804 0.0 T 01-11-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Gene3D G3DSA:3.30.413.10 625 795 4.1E-39 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00397 Sirohaem Fe-binding site signature 673 691 2.6E-6 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00397 Sirohaem Fe-binding site signature 630 648 2.6E-6 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 626 764 1.4E-26 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Gene3D G3DSA:3.50.50.60 115 239 5.3E-91 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.6E-12 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.6E-12 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 2.6E-12 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 2.6E-12 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.0E-23 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.0E-23 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 2.0E-23 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.0E-23 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.0E-23 T 01-11-2018 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 791 0.0 T 01-11-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Pfam PF04324 BFD-like [2Fe-2S] binding domain 481 530 3.2E-13 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 Pfam PF04324 BFD-like [2Fe-2S] binding domain 416 465 6.3E-13 T 01-11-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DOE78_05005 63901bf5a7d23ee53f0040666275c157 804 SUPERFAMILY SSF55124 514 635 9.16E-25 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_03680 e945cbde3c94f9bd8bd41fa82fd6d417 308 SUPERFAMILY SSF103481 185 285 7.85E-16 T 01-11-2018 DOE78_03680 e945cbde3c94f9bd8bd41fa82fd6d417 308 SUPERFAMILY SSF103481 40 141 3.27E-14 T 01-11-2018 DOE78_03680 e945cbde3c94f9bd8bd41fa82fd6d417 308 Pfam PF00892 EamA-like transporter family 150 285 1.1E-23 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_03680 e945cbde3c94f9bd8bd41fa82fd6d417 308 Pfam PF00892 EamA-like transporter family 7 138 3.0E-21 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_18990 59d778207d85b3fb61aa3b173606c716 217 Gene3D G3DSA:3.40.50.300 14 214 2.4E-40 T 01-11-2018 DOE78_18990 59d778207d85b3fb61aa3b173606c716 217 SMART SM00382 29 204 0.0012 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18990 59d778207d85b3fb61aa3b173606c716 217 Pfam PF02562 PhoH-like protein 16 210 1.1E-31 T 01-11-2018 IPR003714 PhoH-like protein GO:0005524 DOE78_18990 59d778207d85b3fb61aa3b173606c716 217 SUPERFAMILY SSF52540 14 205 1.95E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09525 4aa7ac8375866a46fca729535ccf5923 142 SUPERFAMILY SSF159888 12 131 5.49E-6 T 01-11-2018 DOE78_09525 4aa7ac8375866a46fca729535ccf5923 142 Pfam PF08818 Domain of unknown function (DU1801) 25 129 2.0E-14 T 01-11-2018 IPR014922 Domain of unknown function DUF1801 DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 Pfam PF00491 Arginase family 36 308 3.0E-65 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 PIRSF PIRSF036979 11 315 4.6E-55 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 SUPERFAMILY SSF52768 33 311 2.88E-66 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 ProSitePatterns PS01053 Arginase family signature. 240 261 - T 01-11-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 309 4.0E-73 T 01-11-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 Gene3D G3DSA:3.40.800.10 23 314 8.1E-85 T 01-11-2018 DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 PRINTS PR00116 Arginase signature 123 138 2.5E-8 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_14260 1c688cf4a43153df5da00d487e5e7cb3 318 PRINTS PR00116 Arginase signature 237 266 2.5E-8 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_20705 01f256e921d18a7f61f08043c1f4aafa 254 SMART SM00346 7 97 4.4E-27 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DOE78_20705 01f256e921d18a7f61f08043c1f4aafa 254 Gene3D G3DSA:3.30.450.40 81 254 1.0E-66 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_20705 01f256e921d18a7f61f08043c1f4aafa 254 Pfam PF09339 IclR helix-turn-helix domain 9 59 2.7E-15 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DOE78_20705 01f256e921d18a7f61f08043c1f4aafa 254 SUPERFAMILY SSF46785 7 80 5.86E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20705 01f256e921d18a7f61f08043c1f4aafa 254 Pfam PF01614 Bacterial transcriptional regulator 124 249 1.0E-40 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal DOE78_20705 01f256e921d18a7f61f08043c1f4aafa 254 SUPERFAMILY SSF55781 65 253 9.81E-58 T 01-11-2018 DOE78_20705 01f256e921d18a7f61f08043c1f4aafa 254 Gene3D G3DSA:1.10.10.10 5 80 6.7E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 208 2.6E-21 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 SUPERFAMILY SSF101386 233 334 7.12E-26 T 01-11-2018 DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 396 454 4.7E-7 T 01-11-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 257 330 4.7E-29 T 01-11-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 Gene3D G3DSA:1.10.287.1080 231 354 2.3E-44 T 01-11-2018 DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 SUPERFAMILY SSF53790 5 265 5.96E-28 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 PIRSF PIRSF002845 2 489 9.2E-219 T 01-11-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 Gene3D G3DSA:1.10.287.1080 358 488 7.6E-43 T 01-11-2018 DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 SUPERFAMILY SSF101386 367 461 4.86E-23 T 01-11-2018 DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 TIGRFAM TIGR00444 mazG: MazG family protein 241 485 8.2E-104 T 01-11-2018 IPR011551 NTP pyrophosphohydrolase MazG DOE78_00345 0ee8b6485bd7a7b1fb37e104d9437c61 489 Gene3D G3DSA:3.40.1010.10 2 121 1.6E-9 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_06100 3f8ff431e3cbaeed506dca248274c4a6 264 SUPERFAMILY SSF52540 2 235 6.71E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06100 3f8ff431e3cbaeed506dca248274c4a6 264 Gene3D G3DSA:3.40.50.300 1 261 2.3E-58 T 01-11-2018 DOE78_06100 3f8ff431e3cbaeed506dca248274c4a6 264 Pfam PF00005 ABC transporter 23 177 7.7E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06100 3f8ff431e3cbaeed506dca248274c4a6 264 SMART SM00382 31 234 5.6E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_06100 3f8ff431e3cbaeed506dca248274c4a6 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_09310 5c8e550b67524450b5a066504db2ad22 150 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 8 144 6.7E-24 T 01-11-2018 IPR009936 Protein of unknown function DUF1468 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 SMART SM00382 108 269 4.3E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 SMART SM01086 311 405 7.5E-35 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 SMART SM00994 10 49 8.0E-24 T 01-11-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 406 4.0E-217 T 01-11-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 SUPERFAMILY SSF57716 11 46 1.71E-11 T 01-11-2018 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.948 T 01-11-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 SUPERFAMILY SSF52540 59 396 6.0E-81 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 Gene3D G3DSA:1.10.8.60 310 417 3.7E-38 T 01-11-2018 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.6E-20 T 01-11-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 2.0E-51 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 Gene3D G3DSA:3.40.50.300 53 309 4.5E-108 T 01-11-2018 DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 Gene3D G3DSA:3.30.50.30 3 50 8.4E-22 T 01-11-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DOE78_18085 da5e33c54f55b213b90f6f28ad91afcc 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 2.6E-18 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_09445 1a8560c9157a33e7388f7b1ee1329227 292 SUPERFAMILY SSF46689 8 73 1.25E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_09445 1a8560c9157a33e7388f7b1ee1329227 292 Gene3D G3DSA:1.10.10.10 2 74 8.3E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09445 1a8560c9157a33e7388f7b1ee1329227 292 SUPERFAMILY SSF53697 97 274 5.65E-28 T 01-11-2018 DOE78_09445 1a8560c9157a33e7388f7b1ee1329227 292 Gene3D G3DSA:3.40.50.10490 97 281 2.2E-34 T 01-11-2018 DOE78_09445 1a8560c9157a33e7388f7b1ee1329227 292 Pfam PF01380 SIS domain 128 236 3.4E-15 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_09445 1a8560c9157a33e7388f7b1ee1329227 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 67 5.9E-16 T 01-11-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 Gene3D G3DSA:3.90.110.10 150 310 7.2E-63 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 4.3E-29 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 4.3E-29 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 4.3E-29 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 4.3E-29 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 4.3E-29 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 PIRSF PIRSF000102 2 311 3.0E-105 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 Hamap MF_00487 Malate dehydrogenase [mdh]. 6 312 46.799 T 01-11-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 SUPERFAMILY SSF51735 3 147 1.37E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18445 e046e2727c25fec24febb520e338bf68 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 3.2E-41 T 01-11-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 311 4.6E-162 T 01-11-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 Gene3D G3DSA:3.40.50.720 1 149 7.3E-60 T 01-11-2018 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 SUPERFAMILY SSF56327 150 311 3.46E-53 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_18445 e046e2727c25fec24febb520e338bf68 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 309 1.7E-28 T 01-11-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Gene3D G3DSA:3.40.50.2300 422 505 1.1E-10 T 01-11-2018 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Pfam PF08279 HTH domain 8 59 9.6E-8 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Pfam PF00874 PRD domain 213 301 2.3E-19 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Pfam PF00874 PRD domain 323 411 5.1E-19 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 557 685 7.7E-14 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Gene3D G3DSA:1.10.10.10 78 152 3.3E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Gene3D G3DSA:1.10.10.10 3 65 1.5E-5 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Gene3D G3DSA:3.40.930.10 555 688 9.2E-15 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 SUPERFAMILY SSF63520 320 414 7.59E-20 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Gene3D G3DSA:1.10.1790.10 317 413 1.4E-19 T 01-11-2018 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 Gene3D G3DSA:1.10.1790.10 204 305 3.0E-21 T 01-11-2018 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 SUPERFAMILY SSF55804 550 687 1.07E-15 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 SUPERFAMILY SSF63520 201 305 2.88E-21 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_01155 6cc79c2a2c52dd181c571cd10e89531c 699 SUPERFAMILY SSF52794 420 499 4.76E-10 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 288 55.83 T 01-11-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 Gene3D G3DSA:1.10.8.100 220 289 2.5E-21 T 01-11-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 01-11-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 SUPERFAMILY SSF53335 17 290 1.21E-73 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 286 1.6E-86 T 01-11-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 SMART SM00650 36 212 1.4E-84 T 01-11-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 Gene3D G3DSA:3.40.50.150 2 216 4.5E-72 T 01-11-2018 DOE78_00260 80555228cc3c7c00a8f05243a4e6724f 292 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 281 2.2E-75 T 01-11-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DOE78_04695 d4079a39da6f53e35b9d48720d1d6fc7 254 SUPERFAMILY SSF55781 76 251 6.54E-50 T 01-11-2018 DOE78_04695 d4079a39da6f53e35b9d48720d1d6fc7 254 SUPERFAMILY SSF46785 4 77 5.73E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04695 d4079a39da6f53e35b9d48720d1d6fc7 254 Pfam PF09339 IclR helix-turn-helix domain 6 56 1.9E-14 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DOE78_04695 d4079a39da6f53e35b9d48720d1d6fc7 254 Gene3D G3DSA:1.10.10.10 2 75 1.3E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04695 d4079a39da6f53e35b9d48720d1d6fc7 254 Pfam PF01614 Bacterial transcriptional regulator 121 247 1.4E-36 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal DOE78_04695 d4079a39da6f53e35b9d48720d1d6fc7 254 Gene3D G3DSA:3.30.450.40 76 253 7.2E-60 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_04695 d4079a39da6f53e35b9d48720d1d6fc7 254 SMART SM00346 4 94 8.6E-28 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DOE78_02480 af6ece1460c87562658c3679ecea5f8c 342 SUPERFAMILY SSF51735 141 258 3.25E-9 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_02480 af6ece1460c87562658c3679ecea5f8c 342 SUPERFAMILY SSF81324 9 113 7.59E-22 T 01-11-2018 DOE78_02480 af6ece1460c87562658c3679ecea5f8c 342 Gene3D G3DSA:3.40.50.720 115 268 1.1E-18 T 01-11-2018 DOE78_02480 af6ece1460c87562658c3679ecea5f8c 342 Pfam PF02254 TrkA-N domain 140 244 3.3E-7 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DOE78_02480 af6ece1460c87562658c3679ecea5f8c 342 Pfam PF07885 Ion channel 24 99 3.5E-15 T 01-11-2018 IPR013099 Potassium channel domain DOE78_02480 af6ece1460c87562658c3679ecea5f8c 342 Gene3D G3DSA:1.10.287.70 2 101 1.6E-19 T 01-11-2018 DOE78_13495 2cb05481abbb0b0de3b47cc47ca9f255 144 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 4.8E-35 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DOE78_13495 2cb05481abbb0b0de3b47cc47ca9f255 144 Pfam PF03061 Thioesterase superfamily 18 102 7.2E-15 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DOE78_13495 2cb05481abbb0b0de3b47cc47ca9f255 144 Gene3D G3DSA:3.10.129.10 4 127 2.7E-36 T 01-11-2018 DOE78_13495 2cb05481abbb0b0de3b47cc47ca9f255 144 PIRSF PIRSF003230 3 136 2.4E-31 T 01-11-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DOE78_13495 2cb05481abbb0b0de3b47cc47ca9f255 144 SUPERFAMILY SSF54637 6 133 6.41E-38 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_11360 398acf60669c9b5921111e6e717fcf36 161 SUPERFAMILY SSF55729 2 146 1.67E-29 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_11360 398acf60669c9b5921111e6e717fcf36 161 Pfam PF13302 Acetyltransferase (GNAT) domain 9 141 3.1E-25 T 01-11-2018 IPR000182 GNAT domain DOE78_11360 398acf60669c9b5921111e6e717fcf36 161 Gene3D G3DSA:3.40.630.30 1 161 4.7E-35 T 01-11-2018 DOE78_00790 0a8b9c4db87204f6ab3c67991aa791df 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 01-11-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00790 0a8b9c4db87204f6ab3c67991aa791df 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 3.4E-25 T 01-11-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00790 0a8b9c4db87204f6ab3c67991aa791df 61 SUPERFAMILY SSF57716 3 61 5.42E-22 T 01-11-2018 DOE78_00790 0a8b9c4db87204f6ab3c67991aa791df 61 Gene3D G3DSA:4.10.830.10 1 61 4.8E-31 T 01-11-2018 DOE78_00790 0a8b9c4db87204f6ab3c67991aa791df 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 26.091 T 01-11-2018 IPR023053 Ribosomal protein S14, type Z DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 18 214 5.8E-114 T 01-11-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 Pfam PF04542 Sigma-70 region 2 40 109 1.1E-14 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 Pfam PF08281 Sigma-70, region 4 165 209 9.1E-10 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 64 77 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 181 208 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 PIRSF PIRSF002939 5 220 2.8E-111 T 01-11-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 SUPERFAMILY SSF88659 127 214 2.09E-11 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 SUPERFAMILY SSF88946 21 109 1.57E-23 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 SMART SM00421 164 213 0.0076 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_00620 8297125f0fffc98f0343a6994afb2882 220 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 213 1.6E-26 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_14470 53e2e71f865438e641026ef7d8742f9a 83 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 10 56 7.0E-8 T 01-11-2018 DOE78_14470 53e2e71f865438e641026ef7d8742f9a 83 Pfam PF11132 Transcriptional regulator protein (SplA) 6 77 5.8E-35 T 01-11-2018 IPR022608 Transcription regulator SplA DOE78_23485 954be0d5e66c739cd2525849eebc1614 308 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 84 227 2.3E-50 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_23485 954be0d5e66c739cd2525849eebc1614 308 Gene3D G3DSA:1.10.260.150 50 308 2.8E-91 T 01-11-2018 DOE78_23485 954be0d5e66c739cd2525849eebc1614 308 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 9 308 48.323 T 01-11-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU DOE78_23485 954be0d5e66c739cd2525849eebc1614 308 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 85 226 4.5E-50 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 PRINTS PR01034 Ribosomal protein S12 signature 55 70 2.4E-59 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 PRINTS PR01034 Ribosomal protein S12 signature 123 135 2.4E-59 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 PRINTS PR01034 Ribosomal protein S12 signature 71 90 2.4E-59 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 PRINTS PR01034 Ribosomal protein S12 signature 40 55 2.4E-59 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 PRINTS PR01034 Ribosomal protein S12 signature 90 107 2.4E-59 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 PRINTS PR01034 Ribosomal protein S12 signature 107 123 2.4E-59 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 PIRSF PIRSF002133 1 137 2.2E-49 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 SUPERFAMILY SSF50249 2 136 2.74E-49 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 Gene3D G3DSA:2.40.50.140 1 140 2.4E-63 T 01-11-2018 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 2.1E-69 T 01-11-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.768 T 01-11-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 Pfam PF00164 Ribosomal protein S12/S23 32 136 2.0E-38 T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00680 3f1d1b9b8ab3a7b5aecee92adb056f69 140 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 01-11-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_12540 446f3b1db988acde4cb4ddf2393c6af8 652 SUPERFAMILY SSF56519 52 301 7.19E-36 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_12540 446f3b1db988acde4cb4ddf2393c6af8 652 Gene3D G3DSA:3.90.1310.30 60 545 1.0E-210 T 01-11-2018 DOE78_12540 446f3b1db988acde4cb4ddf2393c6af8 652 Gene3D G3DSA:1.10.10.1230 85 182 1.0E-210 T 01-11-2018 DOE78_12540 446f3b1db988acde4cb4ddf2393c6af8 652 SUPERFAMILY SSF56601 301 635 4.08E-68 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_12540 446f3b1db988acde4cb4ddf2393c6af8 652 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 286 5.9E-36 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_12540 446f3b1db988acde4cb4ddf2393c6af8 652 Gene3D G3DSA:3.40.710.10 301 640 1.0E-210 T 01-11-2018 DOE78_12540 446f3b1db988acde4cb4ddf2393c6af8 652 Pfam PF00905 Penicillin binding protein transpeptidase domain 328 646 3.5E-68 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_05085 920c2106329bb8fd9355d91e058a962c 416 SUPERFAMILY SSF103473 16 414 6.02E-41 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_05085 920c2106329bb8fd9355d91e058a962c 416 Pfam PF11700 Vacuole effluxer Atg22 like 6 414 6.8E-58 T 01-11-2018 IPR024671 Autophagy-related protein 22-like DOE78_05085 920c2106329bb8fd9355d91e058a962c 416 Gene3D G3DSA:1.20.1250.20 6 413 1.4E-30 T 01-11-2018 DOE78_05860 8e76d6b340a207e55f9cd035fb4919b0 314 Gene3D G3DSA:2.40.50.140 23 101 5.6E-7 T 01-11-2018 DOE78_05860 8e76d6b340a207e55f9cd035fb4919b0 314 SMART SM00471 156 288 2.1E-6 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_05860 8e76d6b340a207e55f9cd035fb4919b0 314 Pfam PF01966 HD domain 161 278 6.0E-11 T 01-11-2018 IPR006674 HD domain DOE78_05860 8e76d6b340a207e55f9cd035fb4919b0 314 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 1 313 62.802 T 01-11-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 DOE78_05860 8e76d6b340a207e55f9cd035fb4919b0 314 Gene3D G3DSA:1.10.3210.10 131 292 1.6E-11 T 01-11-2018 DOE78_05860 8e76d6b340a207e55f9cd035fb4919b0 314 SUPERFAMILY SSF109604 138 279 1.29E-14 T 01-11-2018 DOE78_08490 7d12260b72aa819de1a43ff3080c8133 370 Gene3D G3DSA:3.40.50.2300 48 320 7.7E-106 T 01-11-2018 DOE78_08490 7d12260b72aa819de1a43ff3080c8133 370 Gene3D G3DSA:3.40.50.2300 152 354 7.7E-106 T 01-11-2018 DOE78_08490 7d12260b72aa819de1a43ff3080c8133 370 SUPERFAMILY SSF53822 59 271 1.37E-14 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_08490 7d12260b72aa819de1a43ff3080c8133 370 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 46 359 1.1E-84 T 01-11-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DOE78_03765 41cffc702d163b9988a963c747745e80 448 Pfam PF00082 Subtilase family 151 434 1.2E-45 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_03765 41cffc702d163b9988a963c747745e80 448 Gene3D G3DSA:3.40.50.200 110 448 1.9E-81 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_03765 41cffc702d163b9988a963c747745e80 448 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 193 203 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_03765 41cffc702d163b9988a963c747745e80 448 SUPERFAMILY SSF52743 125 447 1.7E-68 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_03765 41cffc702d163b9988a963c747745e80 448 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 387 397 - T 01-11-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DOE78_03765 41cffc702d163b9988a963c747745e80 448 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 202 3.3E-20 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_03765 41cffc702d163b9988a963c747745e80 448 PRINTS PR00723 Subtilisin serine protease family (S8) signature 151 170 3.3E-20 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_03765 41cffc702d163b9988a963c747745e80 448 PRINTS PR00723 Subtilisin serine protease family (S8) signature 386 402 3.3E-20 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_03765 41cffc702d163b9988a963c747745e80 448 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 156 167 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 Gene3D G3DSA:3.10.350.10 1 50 2.8E-14 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 Gene3D G3DSA:3.10.350.10 51 106 3.0E-13 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 SUPERFAMILY SSF54106 52 96 3.01E-11 T 01-11-2018 DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 Pfam PF01476 LysM domain 4 47 1.4E-12 T 01-11-2018 IPR018392 LysM domain DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 Pfam PF01476 LysM domain 53 96 2.8E-11 T 01-11-2018 IPR018392 LysM domain DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 Pfam PF00704 Glycosyl hydrolases family 18 189 408 5.0E-25 T 01-11-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 SUPERFAMILY SSF51445 122 416 5.04E-44 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 SMART SM00636 113 410 3.6E-27 T 01-11-2018 IPR011583 Chitinase II GO:0008061 DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 Gene3D G3DSA:3.20.20.80 130 415 1.0E-103 T 01-11-2018 DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 Gene3D G3DSA:3.10.50.10 323 381 1.0E-103 T 01-11-2018 IPR029070 Chitinase insertion domain superfamily DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 SMART SM00257 3 47 2.4E-14 T 01-11-2018 IPR018392 LysM domain DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 SMART SM00257 52 96 3.0E-11 T 01-11-2018 IPR018392 LysM domain DOE78_00115 ae2f0136b2424e849f7351d5c82c5d16 427 SUPERFAMILY SSF54106 2 47 1.31E-10 T 01-11-2018 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 PIRSF PIRSF001467 2 145 6.2E-42 T 01-11-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 SUPERFAMILY SSF50891 14 138 4.09E-48 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 Gene3D G3DSA:2.40.100.10 1 146 1.5E-60 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 138 4.0E-42 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 1.5E-26 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 1.5E-26 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 1.5E-26 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 1.5E-26 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 1.5E-26 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_13370 624ac4436e61affb1d113974fed0bf9f 146 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 01-11-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DOE78_00925 51710d290954c2e7306def404f77e4e3 207 PIRSF PIRSF029886 1 199 4.1E-80 T 01-11-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 DOE78_00925 51710d290954c2e7306def404f77e4e3 207 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 195 1.2E-77 T 01-11-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 DOE78_00925 51710d290954c2e7306def404f77e4e3 207 SMART SM01251 17 196 3.3E-110 T 01-11-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 DOE78_20135 fa6adb73aa883501cca8b3b10ffe8f09 381 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 58 8.7E-6 T 01-11-2018 DOE78_20135 fa6adb73aa883501cca8b3b10ffe8f09 381 Gene3D G3DSA:3.30.420.40 83 376 2.8E-90 T 01-11-2018 DOE78_20135 fa6adb73aa883501cca8b3b10ffe8f09 381 Pfam PF00480 ROK family 85 374 5.8E-71 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_20135 fa6adb73aa883501cca8b3b10ffe8f09 381 SUPERFAMILY SSF53067 82 373 5.49E-57 T 01-11-2018 DOE78_20135 fa6adb73aa883501cca8b3b10ffe8f09 381 Gene3D G3DSA:3.30.420.40 206 358 2.8E-90 T 01-11-2018 DOE78_20135 fa6adb73aa883501cca8b3b10ffe8f09 381 Gene3D G3DSA:1.10.10.10 12 78 1.7E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_20135 fa6adb73aa883501cca8b3b10ffe8f09 381 SUPERFAMILY SSF46785 10 75 3.59E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_16525 af804db39cdd89fc7ea674ad8b685186 290 SUPERFAMILY SSF103481 182 279 4.05E-12 T 01-11-2018 DOE78_16525 af804db39cdd89fc7ea674ad8b685186 290 SUPERFAMILY SSF103481 39 136 8.63E-12 T 01-11-2018 DOE78_16525 af804db39cdd89fc7ea674ad8b685186 290 Pfam PF00892 EamA-like transporter family 147 280 1.6E-19 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_16525 af804db39cdd89fc7ea674ad8b685186 290 Pfam PF00892 EamA-like transporter family 3 133 1.3E-19 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 Gene3D G3DSA:1.10.10.10 2 68 1.3E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 SUPERFAMILY SSF51306 84 205 6.63E-36 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 Hamap MF_00015 LexA repressor [lexA]. 3 207 35.055 T 01-11-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 207 1.3E-80 T 01-11-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 SUPERFAMILY SSF46785 3 70 1.11E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 Gene3D G3DSA:2.10.109.10 90 207 2.5E-43 T 01-11-2018 DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 Pfam PF00717 Peptidase S24-like 125 185 4.4E-18 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 Pfam PF01726 LexA DNA binding domain 1 65 1.2E-28 T 01-11-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 132 2.8E-10 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 2.8E-10 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DOE78_08670 95f9df6e214bacf1fff63ebf9f37786d 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 133 144 2.8E-10 T 01-11-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DOE78_05555 b68b6bde238a37d8f1567e3797dccb02 328 Gene3D G3DSA:3.40.630.10 22 321 1.5E-61 T 01-11-2018 DOE78_05555 b68b6bde238a37d8f1567e3797dccb02 328 SMART SM00631 28 304 1.1E-23 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_05555 b68b6bde238a37d8f1567e3797dccb02 328 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 72 94 - T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_05555 b68b6bde238a37d8f1567e3797dccb02 328 SUPERFAMILY SSF53187 25 314 3.64E-53 T 01-11-2018 DOE78_05555 b68b6bde238a37d8f1567e3797dccb02 328 Pfam PF00246 Zinc carboxypeptidase 37 285 5.0E-35 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_06855 c816ec4d97e4049c3f204118c9547e59 242 Pfam PF00929 Exonuclease 60 214 3.9E-25 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_06855 c816ec4d97e4049c3f204118c9547e59 242 SMART SM00479 57 226 7.5E-36 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_06855 c816ec4d97e4049c3f204118c9547e59 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 58 228 6.8E-23 T 01-11-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_06855 c816ec4d97e4049c3f204118c9547e59 242 SUPERFAMILY SSF53098 52 228 2.02E-42 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_06855 c816ec4d97e4049c3f204118c9547e59 242 Gene3D G3DSA:3.30.420.10 54 228 9.7E-39 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 Pfam PF01416 tRNA pseudouridine synthase 144 246 5.1E-31 T 01-11-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 Pfam PF01416 tRNA pseudouridine synthase 9 105 1.2E-11 T 01-11-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 Gene3D G3DSA:3.30.70.660 108 243 2.9E-50 T 01-11-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 Gene3D G3DSA:3.30.70.580 1 106 8.2E-38 T 01-11-2018 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 37.344 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 PIRSF PIRSF001430 1 246 5.8E-85 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 SUPERFAMILY SSF55120 1 246 1.87E-87 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_00885 3bb9d36377e9804aab2538638c1e6d2b 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 240 8.0E-71 T 01-11-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_23645 b7cc0760342da2a106b2da4f18989675 139 Gene3D G3DSA:3.30.70.3270 24 139 1.1E-32 T 01-11-2018 DOE78_23645 b7cc0760342da2a106b2da4f18989675 139 SUPERFAMILY SSF54862 24 126 1.09E-24 T 01-11-2018 DOE78_23645 b7cc0760342da2a106b2da4f18989675 139 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 7 122 4.8E-35 T 01-11-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23645 b7cc0760342da2a106b2da4f18989675 139 Pfam PF12838 4Fe-4S dicluster domain 45 102 2.1E-10 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_23645 b7cc0760342da2a106b2da4f18989675 139 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 131 22.839 T 01-11-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23645 b7cc0760342da2a106b2da4f18989675 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_15390 017133680896b368ad20729ceaa81c89 93 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 3 91 9.0E-42 T 01-11-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU DOE78_15390 017133680896b368ad20729ceaa81c89 93 Pfam PF14122 YokU-like protein, putative antitoxin 3 89 9.5E-41 T 01-11-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU DOE78_15390 017133680896b368ad20729ceaa81c89 93 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 51 3.5E-9 T 01-11-2018 IPR022453 Zinc finger, MqsA-type DOE78_20980 e7c2a2ad2b150a90d4cc20bf4f7cd819 120 Gene3D G3DSA:2.60.300.12 4 112 4.6E-34 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DOE78_20980 e7c2a2ad2b150a90d4cc20bf4f7cd819 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 105 2.9E-20 T 01-11-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DOE78_20980 e7c2a2ad2b150a90d4cc20bf4f7cd819 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 109 4.3E-36 T 01-11-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DOE78_20980 e7c2a2ad2b150a90d4cc20bf4f7cd819 120 SUPERFAMILY SSF89360 4 96 7.46E-29 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DOE78_20980 e7c2a2ad2b150a90d4cc20bf4f7cd819 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 01-11-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 SUPERFAMILY SSF51905 1 189 5.83E-45 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 166 184 2.8E-9 T 01-11-2018 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.8E-9 T 01-11-2018 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 291 2.8E-9 T 01-11-2018 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PIRSF PIRSF000332 5 199 1.4E-22 T 01-11-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PIRSF PIRSF000332 252 303 0.091 T 01-11-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 162 186 1.5E-14 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 131 1.5E-14 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.5E-14 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 SUPERFAMILY SSF51905 166 321 1.0E-6 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 201 7.5E-38 T 01-11-2018 DOE78_12365 acbbb6a943e9a737ff89808d37f41715 353 Gene3D G3DSA:3.50.50.60 1 351 1.4E-101 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 SMART SM00354 6 76 1.2E-23 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 01-11-2018 DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 Pfam PF13377 Periplasmic binding protein-like domain 174 335 1.5E-37 T 01-11-2018 DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 Gene3D G3DSA:3.40.50.2300 166 332 1.5E-80 T 01-11-2018 DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 SUPERFAMILY SSF53822 66 334 1.26E-75 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 8.5E-14 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 SUPERFAMILY SSF47413 5 64 1.36E-14 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 Gene3D G3DSA:1.10.260.40 1 63 1.4E-18 T 01-11-2018 DOE78_14190 300bf06ed7996bb0d3479b5c1f4f6abd 335 Gene3D G3DSA:3.40.50.2300 67 327 1.5E-80 T 01-11-2018 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 30 51 6.7E-41 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 17 24 6.7E-41 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 118 132 6.7E-41 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 87 104 6.7E-41 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 162 179 6.7E-41 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 61 69 6.7E-41 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 9 251 1.0E-90 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 Pfam PF02110 Hydroxyethylthiazole kinase family 9 251 1.7E-88 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 Gene3D G3DSA:3.40.1190.20 1 269 1.2E-92 T 01-11-2018 IPR029056 Ribokinase-like DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 PIRSF PIRSF000513 3 267 1.6E-92 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 11 259 32.509 T 01-11-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12985 1e8c131064aa4914f8a89417ec330119 271 SUPERFAMILY SSF53613 6 263 4.83E-60 T 01-11-2018 IPR029056 Ribokinase-like DOE78_13135 8fee58ddeefd30f4e0ecb3ba391829f8 268 SUPERFAMILY SSF56784 1 265 4.13E-62 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_13135 8fee58ddeefd30f4e0ecb3ba391829f8 268 Gene3D G3DSA:3.30.1240.10 83 190 8.6E-64 T 01-11-2018 DOE78_13135 8fee58ddeefd30f4e0ecb3ba391829f8 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 01-11-2018 DOE78_13135 8fee58ddeefd30f4e0ecb3ba391829f8 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 261 6.0E-58 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_13135 8fee58ddeefd30f4e0ecb3ba391829f8 268 Gene3D G3DSA:3.40.50.1000 4 261 8.6E-64 T 01-11-2018 IPR023214 HAD superfamily DOE78_13135 8fee58ddeefd30f4e0ecb3ba391829f8 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 234 2.0E-26 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_13135 8fee58ddeefd30f4e0ecb3ba391829f8 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 261 3.6E-58 T 01-11-2018 DOE78_17070 f151bb4c123eb8006560459dc142fd86 356 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 01-11-2018 IPR001482 Type II/IV secretion system protein DOE78_17070 f151bb4c123eb8006560459dc142fd86 356 SUPERFAMILY SSF52540 4 288 3.71E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17070 f151bb4c123eb8006560459dc142fd86 356 Gene3D G3DSA:3.40.50.300 117 332 8.4E-64 T 01-11-2018 DOE78_17070 f151bb4c123eb8006560459dc142fd86 356 Gene3D G3DSA:3.30.450.90 2 110 3.1E-27 T 01-11-2018 DOE78_17070 f151bb4c123eb8006560459dc142fd86 356 Pfam PF00437 Type II/IV secretion system protein 13 275 1.6E-66 T 01-11-2018 IPR001482 Type II/IV secretion system protein DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 Pfam PF00270 DEAD/DEAH box helicase 26 190 1.3E-50 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 SUPERFAMILY SSF52540 69 356 8.62E-78 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 Pfam PF00271 Helicase conserved C-terminal domain 226 334 8.0E-30 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 Gene3D G3DSA:3.40.50.300 208 426 1.1E-51 T 01-11-2018 DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 Gene3D G3DSA:3.40.50.300 1 206 1.6E-79 T 01-11-2018 DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 SMART SM00487 21 217 5.6E-67 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 SMART SM00490 253 334 1.1E-33 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_15165 5624f102f63613cf80550bc749a37a7e 482 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 2 482 42.623 T 01-11-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:3.30.70.1430 550 655 5.0E-301 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:3.30.70.1440 656 851 5.0E-301 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 SUPERFAMILY SSF82693 134 304 1.24E-9 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 8.4E-253 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:1.20.1640.10 503 1008 5.0E-301 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 SUPERFAMILY SSF82693 549 634 1.52E-9 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 SUPERFAMILY SSF82866 790 1013 3.01E-53 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 SUPERFAMILY SSF82693 40 132 7.85E-21 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 SUPERFAMILY SSF82714 179 262 7.59E-12 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:3.30.70.1430 40 801 5.0E-301 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:3.30.2090.10 704 793 5.0E-301 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 535 552 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 2.3E-59 T 01-11-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:1.20.1640.10 10 502 5.0E-301 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:3.30.2090.10 174 266 5.0E-301 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 SUPERFAMILY SSF82714 706 793 2.62E-11 T 01-11-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 SUPERFAMILY SSF82866 296 488 2.75E-48 T 01-11-2018 DOE78_06940 49344128534c09630cbd66ec4e8d6a08 1023 Gene3D G3DSA:3.30.70.1320 130 324 5.0E-301 T 01-11-2018 DOE78_19830 a9ff9c7278148e1bc9b8a871d91739dd 392 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 272 3.2E-9 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_19830 a9ff9c7278148e1bc9b8a871d91739dd 392 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 8.3E-26 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_19830 a9ff9c7278148e1bc9b8a871d91739dd 392 Gene3D G3DSA:3.30.360.10 131 381 1.6E-104 T 01-11-2018 DOE78_19830 a9ff9c7278148e1bc9b8a871d91739dd 392 Gene3D G3DSA:3.40.50.720 7 360 1.6E-104 T 01-11-2018 DOE78_19830 a9ff9c7278148e1bc9b8a871d91739dd 392 SUPERFAMILY SSF51735 2 155 1.93E-48 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_19830 a9ff9c7278148e1bc9b8a871d91739dd 392 SUPERFAMILY SSF55347 131 330 2.45E-34 T 01-11-2018 DOE78_15005 d9eb7738571b9bdd4c8099fdf7f1917b 78 Pfam PF01381 Helix-turn-helix 6 55 2.2E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_15005 d9eb7738571b9bdd4c8099fdf7f1917b 78 SUPERFAMILY SSF47413 4 58 9.01E-12 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_15005 d9eb7738571b9bdd4c8099fdf7f1917b 78 Gene3D G3DSA:1.10.260.40 3 64 1.4E-10 T 01-11-2018 DOE78_15005 d9eb7738571b9bdd4c8099fdf7f1917b 78 SMART SM00530 5 60 0.0016 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 SUPERFAMILY SSF46785 6 112 7.17E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 Gene3D G3DSA:3.40.190.290 83 288 8.6E-66 T 01-11-2018 DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 Pfam PF03466 LysR substrate binding domain 91 287 4.0E-30 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 Gene3D G3DSA:1.10.10.10 2 82 1.6E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.9E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-7 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_07275 1ee3eb6148f2274be69602e7cae13f0a 292 SUPERFAMILY SSF53850 91 290 2.17E-27 T 01-11-2018 DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 SUPERFAMILY SSF51261 282 488 1.46E-48 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 SMART SM01208 284 362 5.2E-23 T 01-11-2018 IPR011098 G5 domain DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 SUPERFAMILY SSF54106 230 275 1.7E-6 T 01-11-2018 DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 Gene3D G3DSA:2.20.230.10 284 366 1.2E-15 T 01-11-2018 DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 SMART SM00257 231 276 1.8E-8 T 01-11-2018 IPR018392 LysM domain DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 Gene3D G3DSA:3.10.350.10 229 276 1.3E-9 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 Pfam PF01476 LysM domain 232 275 2.1E-7 T 01-11-2018 IPR018392 LysM domain DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 Pfam PF07501 G5 domain 288 361 2.3E-20 T 01-11-2018 IPR011098 G5 domain DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 Gene3D G3DSA:2.70.70.10 378 491 8.3E-41 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_24585 b0cbb178a530235a9655d7d71797494e 491 Pfam PF01551 Peptidase family M23 391 485 7.0E-31 T 01-11-2018 IPR016047 Peptidase M23 DOE78_12915 69d970f42fc915d7eb3b18e9ea8e8eab 242 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 242 7.0E-118 T 01-11-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DOE78_12915 69d970f42fc915d7eb3b18e9ea8e8eab 242 Pfam PF04055 Radical SAM superfamily 28 123 3.8E-12 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_12915 69d970f42fc915d7eb3b18e9ea8e8eab 242 PIRSF PIRSF000370 2 242 4.7E-50 T 01-11-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DOE78_12915 69d970f42fc915d7eb3b18e9ea8e8eab 242 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 239 35.323 T 01-11-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DOE78_12915 69d970f42fc915d7eb3b18e9ea8e8eab 242 Gene3D G3DSA:3.20.20.70 4 216 9.8E-30 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12915 69d970f42fc915d7eb3b18e9ea8e8eab 242 SUPERFAMILY SSF102114 26 120 2.62E-14 T 01-11-2018 DOE78_12915 69d970f42fc915d7eb3b18e9ea8e8eab 242 Pfam PF13394 4Fe-4S single cluster domain 26 111 1.4E-10 T 01-11-2018 DOE78_03400 a4743845a64e4a5459c3f17f1e54b282 266 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 58 9.9E-23 T 01-11-2018 IPR025713 Motility protein B, N-terminal domain DOE78_03400 a4743845a64e4a5459c3f17f1e54b282 266 Gene3D G3DSA:3.30.1330.60 79 265 1.4E-45 T 01-11-2018 IPR036737 OmpA-like domain superfamily DOE78_03400 a4743845a64e4a5459c3f17f1e54b282 266 SUPERFAMILY SSF103088 138 260 3.4E-28 T 01-11-2018 IPR036737 OmpA-like domain superfamily DOE78_03400 a4743845a64e4a5459c3f17f1e54b282 266 Pfam PF00691 OmpA family 154 254 6.0E-17 T 01-11-2018 IPR006665 OmpA-like domain DOE78_03170 0c9085a4e42244f5cfa3dc67592cce33 405 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 222 392 1.7E-38 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_03170 0c9085a4e42244f5cfa3dc67592cce33 405 Gene3D G3DSA:3.30.300.210 237 396 1.4E-35 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_03170 0c9085a4e42244f5cfa3dc67592cce33 405 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 394 1.4E-88 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Pfam PF08279 HTH domain 6 43 7.8E-6 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Pfam PF05043 Mga helix-turn-helix domain 92 165 9.0E-8 T 01-11-2018 IPR007737 Mga helix-turn-helix domain DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 409 484 2.4E-8 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Pfam PF00874 PRD domain 206 289 9.5E-6 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Pfam PF00874 PRD domain 310 398 3.2E-18 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 SUPERFAMILY SSF52794 408 487 4.39E-11 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Gene3D G3DSA:1.10.1790.10 303 400 2.1E-17 T 01-11-2018 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 SUPERFAMILY SSF63520 304 399 1.03E-18 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Gene3D G3DSA:3.40.50.2300 408 496 3.5E-11 T 01-11-2018 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Gene3D G3DSA:1.10.10.10 2 146 3.3E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Gene3D G3DSA:3.40.930.10 533 684 8.5E-12 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 SUPERFAMILY SSF55804 545 682 2.62E-14 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 547 683 5.8E-12 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 Gene3D G3DSA:1.10.1790.10 199 293 4.9E-5 T 01-11-2018 DOE78_20155 a44fef1a9ee9eaf1aad0fd3cb73c1e7d 701 SUPERFAMILY SSF63520 206 288 4.97E-7 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 Pfam PF00106 short chain dehydrogenase 8 195 7.8E-38 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 SUPERFAMILY SSF51735 6 260 3.16E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 7.6E-23 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 Gene3D G3DSA:3.40.50.720 1 263 8.5E-62 T 01-11-2018 DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.7E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.7E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04440 c756894187cbf51f1cc5f79ac4b26908 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.7E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_03245 0642b10be9eedcb57dac9e5dbd90210e 443 Pfam PF01943 Polysaccharide biosynthesis protein 5 294 3.4E-26 T 01-11-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DOE78_03245 0642b10be9eedcb57dac9e5dbd90210e 443 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 346 436 2.1E-7 T 01-11-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DOE78_03245 0642b10be9eedcb57dac9e5dbd90210e 443 PIRSF PIRSF038958 1 439 1.7E-70 T 01-11-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DOE78_20310 73e700238c13a6100a273ad20c98918f 272 SMART SM00283 93 269 0.0011 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_20310 73e700238c13a6100a273ad20c98918f 272 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 144 269 2.9E-25 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_20310 73e700238c13a6100a273ad20c98918f 272 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 166 193 2.9E-12 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_20310 73e700238c13a6100a273ad20c98918f 272 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 195 224 2.9E-12 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_20310 73e700238c13a6100a273ad20c98918f 272 Gene3D G3DSA:1.10.287.950 90 272 3.2E-36 T 01-11-2018 DOE78_20310 73e700238c13a6100a273ad20c98918f 272 SUPERFAMILY SSF58104 106 267 1.31E-39 T 01-11-2018 DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 Gene3D G3DSA:3.40.50.300 424 668 6.8E-87 T 01-11-2018 DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 SUPERFAMILY SSF52540 419 663 3.41E-86 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 Pfam PF00005 ABC transporter 444 593 9.6E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 Gene3D G3DSA:1.20.1560.10 128 412 3.5E-70 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 SMART SM00382 453 639 1.2E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 ProSitePatterns PS00211 ABC transporters family signature. 565 579 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 SUPERFAMILY SSF90123 5 412 7.59E-72 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05760 7a8a205bcf0d3cdd5dc0bdc97a47d739 670 Pfam PF00664 ABC transporter transmembrane region 142 384 8.8E-45 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_10190 192985672935f7101c7ad57eb90358cc 238 Gene3D G3DSA:3.60.15.10 11 237 2.8E-43 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_10190 192985672935f7101c7ad57eb90358cc 238 SMART SM00849 18 220 4.4E-32 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_10190 192985672935f7101c7ad57eb90358cc 238 Pfam PF00753 Metallo-beta-lactamase superfamily 20 212 4.1E-23 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_10190 192985672935f7101c7ad57eb90358cc 238 SUPERFAMILY SSF56281 2 226 6.55E-47 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 01-11-2018 IPR018253 DnaJ domain, conserved site DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Gene3D G3DSA:2.10.230.10 142 206 1.1E-35 T 01-11-2018 DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 7.5E-145 T 01-11-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Gene3D G3DSA:2.60.260.20 253 332 1.1E-30 T 01-11-2018 DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 SMART SM00271 4 61 1.3E-31 T 01-11-2018 IPR001623 DnaJ domain DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 PRINTS PR00625 DnaJ domain signature 25 40 9.0E-32 T 01-11-2018 IPR001623 DnaJ domain DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 PRINTS PR00625 DnaJ domain signature 41 61 9.0E-32 T 01-11-2018 IPR001623 DnaJ domain DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 PRINTS PR00625 DnaJ domain signature 7 25 9.0E-32 T 01-11-2018 IPR001623 DnaJ domain DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 PRINTS PR00625 DnaJ domain signature 61 80 9.0E-32 T 01-11-2018 IPR001623 DnaJ domain DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 SUPERFAMILY SSF57938 129 210 1.44E-18 T 01-11-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Pfam PF00226 DnaJ domain 5 66 3.0E-27 T 01-11-2018 IPR001623 DnaJ domain DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 42.018 T 01-11-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 SUPERFAMILY SSF49493 109 260 3.14E-20 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 SUPERFAMILY SSF46565 1 100 1.18E-37 T 01-11-2018 IPR036869 Chaperone J-domain superfamily DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Gene3D G3DSA:1.10.287.110 1 106 1.9E-39 T 01-11-2018 IPR036869 Chaperone J-domain superfamily DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Pfam PF01556 DnaJ C terminal domain 115 332 5.2E-45 T 01-11-2018 IPR002939 Chaperone DnaJ, C-terminal DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 SUPERFAMILY SSF49493 257 343 7.19E-26 T 01-11-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Pfam PF00684 DnaJ central domain 142 206 1.5E-13 T 01-11-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DOE78_17480 0b7403af357a13028eb3a42e59f5ad2d 373 Gene3D G3DSA:2.60.260.20 112 248 1.1E-35 T 01-11-2018 DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Gene3D G3DSA:3.10.350.10 319 383 9.2E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SMART SM00257 97 140 1.7E-14 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SMART SM00257 330 374 2.0E-15 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SMART SM00257 143 186 1.3E-14 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SMART SM00257 272 315 1.3E-15 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SMART SM00257 208 251 1.1E-12 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SUPERFAMILY SSF54106 272 314 1.44E-10 T 01-11-2018 DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Pfam PF01476 LysM domain 273 314 1.1E-13 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Pfam PF01476 LysM domain 144 186 1.1E-13 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Pfam PF01476 LysM domain 209 251 7.8E-11 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Pfam PF01476 LysM domain 98 140 5.0E-13 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Pfam PF01476 LysM domain 331 374 3.2E-11 T 01-11-2018 IPR018392 LysM domain DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Gene3D G3DSA:3.10.350.10 206 252 4.3E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Gene3D G3DSA:3.10.350.10 143 187 7.7E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SUPERFAMILY SSF54106 329 375 3.92E-10 T 01-11-2018 DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SUPERFAMILY SSF54106 96 140 1.7E-10 T 01-11-2018 DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SUPERFAMILY SSF54106 207 251 1.57E-10 T 01-11-2018 DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Gene3D G3DSA:3.10.350.10 270 318 1.0E-15 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 Gene3D G3DSA:3.10.350.10 93 142 4.4E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_14300 30e9f12d3528c44a9a60f0e35dbe3b09 519 SUPERFAMILY SSF54106 143 186 9.42E-11 T 01-11-2018 DOE78_12290 ac166f84e586aeb5c9c174c468f08d43 327 Gene3D G3DSA:3.40.50.2300 46 308 6.4E-70 T 01-11-2018 DOE78_12290 ac166f84e586aeb5c9c174c468f08d43 327 SUPERFAMILY SSF53822 42 320 1.03E-52 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_12290 ac166f84e586aeb5c9c174c468f08d43 327 Pfam PF13407 Periplasmic binding protein domain 46 300 3.5E-41 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_12290 ac166f84e586aeb5c9c174c468f08d43 327 Gene3D G3DSA:3.40.50.2300 145 320 6.4E-70 T 01-11-2018 DOE78_06380 94dcbbf0fdff37877126d18ea52c818c 294 PIRSF PIRSF012524 3 288 3.6E-100 T 01-11-2018 IPR014464 Conserved virulence factor B DOE78_06380 94dcbbf0fdff37877126d18ea52c818c 294 Gene3D G3DSA:1.10.10.10 225 285 8.1E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_06380 94dcbbf0fdff37877126d18ea52c818c 294 Gene3D G3DSA:2.40.50.140 77 154 1.6E-22 T 01-11-2018 DOE78_06380 94dcbbf0fdff37877126d18ea52c818c 294 Gene3D G3DSA:2.40.50.140 157 224 7.3E-19 T 01-11-2018 DOE78_06380 94dcbbf0fdff37877126d18ea52c818c 294 Pfam PF13509 S1 domain 7 67 3.2E-19 T 01-11-2018 IPR039566 Conserved virulence factor B, S1 domain DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 Gene3D G3DSA:3.30.450.20 199 315 1.8E-23 T 01-11-2018 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 SUPERFAMILY SSF55890 324 394 1.83E-14 T 01-11-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 323 377 4.6E-10 T 01-11-2018 IPR039506 SpoOB, alpha-helical domain DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 SUPERFAMILY SSF55785 212 312 1.03E-8 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 SMART SM00091 213 281 6.6E-5 T 01-11-2018 IPR000014 PAS domain DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 SUPERFAMILY SSF55874 415 527 8.91E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 SMART SM00387 421 529 3.3E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 Gene3D G3DSA:3.30.565.10 375 525 1.6E-28 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 527 6.6E-16 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 Gene3D G3DSA:3.30.450.20 32 171 5.0E-46 T 01-11-2018 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 Pfam PF17203 Single cache domain 3 37 168 1.5E-25 T 01-11-2018 IPR033463 Single cache domain 3 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 SUPERFAMILY SSF103190 39 167 2.16E-42 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 Pfam PF00989 PAS fold 213 313 7.5E-8 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 5.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 5.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 5.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_22520 3ea0469fc63b0d3aee75a6da08f2f917 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 5.2E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_12495 d97a3ade30e5f6d8f58e8bc45e94631d 108 SUPERFAMILY SSF103481 7 106 9.81E-21 T 01-11-2018 DOE78_12495 d97a3ade30e5f6d8f58e8bc45e94631d 108 Gene3D G3DSA:1.10.3730.20 1 107 3.8E-36 T 01-11-2018 DOE78_12495 d97a3ade30e5f6d8f58e8bc45e94631d 108 Pfam PF00893 Small Multidrug Resistance protein 3 94 8.7E-28 T 01-11-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 SMART SM00487 21 218 1.1E-58 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 01-11-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 SMART SM00490 254 335 4.3E-33 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 Gene3D G3DSA:3.40.50.300 2 206 8.8E-73 T 01-11-2018 DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 Pfam PF03880 DbpA RNA binding domain 405 475 5.8E-19 T 01-11-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 Pfam PF00270 DEAD/DEAH box helicase 26 192 3.2E-48 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 Gene3D G3DSA:3.40.50.300 210 372 2.7E-49 T 01-11-2018 DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 SUPERFAMILY SSF52540 69 356 1.5E-75 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 4 478 70.055 T 01-11-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 Gene3D G3DSA:3.30.70.330 404 479 8.7E-28 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE78_02810 af6d27e091a5e2fa0a12eb93364389a4 479 Pfam PF00271 Helicase conserved C-terminal domain 229 335 3.0E-30 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_05745 2824e2d4ceb07cb3724e3d8145311342 106 SUPERFAMILY SSF55594 7 87 2.36E-5 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_05745 2824e2d4ceb07cb3724e3d8145311342 106 Gene3D G3DSA:3.30.1340.10 3 90 1.6E-5 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_23190 64e8b91f69e1de78af282f83b4270c94 515 Pfam PF02796 Helix-turn-helix domain of resolvase 5 35 6.2E-7 T 01-11-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 DOE78_23190 64e8b91f69e1de78af282f83b4270c94 515 Pfam PF00665 Integrase core domain 141 249 1.9E-13 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 DOE78_23190 64e8b91f69e1de78af282f83b4270c94 515 SUPERFAMILY SSF53098 147 293 4.8E-9 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_23190 64e8b91f69e1de78af282f83b4270c94 515 SUPERFAMILY SSF46689 4 95 2.15E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_23190 64e8b91f69e1de78af282f83b4270c94 515 Gene3D G3DSA:1.10.10.60 1 40 3.6E-5 T 01-11-2018 DOE78_23190 64e8b91f69e1de78af282f83b4270c94 515 Gene3D G3DSA:3.30.420.10 123 299 4.2E-5 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_13985 17fa68e0323bda57d9b05ef23f534c56 613 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 97 372 6.0E-84 T 01-11-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 DOE78_13985 17fa68e0323bda57d9b05ef23f534c56 613 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 365 434 1.3E-9 T 01-11-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 DOE78_18010 1865059d838f73437e16601636725254 436 SUPERFAMILY SSF53623 3 299 8.34E-95 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_18010 1865059d838f73437e16601636725254 436 Pfam PF08245 Mur ligase middle domain 46 274 8.3E-14 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DOE78_18010 1865059d838f73437e16601636725254 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 378 1.8E-10 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DOE78_18010 1865059d838f73437e16601636725254 436 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 01-11-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DOE78_18010 1865059d838f73437e16601636725254 436 SUPERFAMILY SSF53244 301 426 1.01E-24 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_18010 1865059d838f73437e16601636725254 436 Gene3D G3DSA:3.90.190.20 301 431 9.7E-30 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_18010 1865059d838f73437e16601636725254 436 PIRSF PIRSF001563 1 434 8.0E-154 T 01-11-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DOE78_18010 1865059d838f73437e16601636725254 436 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 426 2.9E-128 T 01-11-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DOE78_18010 1865059d838f73437e16601636725254 436 Gene3D G3DSA:3.40.1190.10 3 300 2.5E-100 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_18010 1865059d838f73437e16601636725254 436 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 44 67 - T 01-11-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 Gene3D G3DSA:3.90.400.10 245 298 8.4E-161 T 01-11-2018 DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 SUPERFAMILY SSF51011 508 583 7.2E-13 T 01-11-2018 DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 SMART SM00642 138 496 4.3E-127 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 Gene3D G3DSA:3.20.20.80 132 498 8.4E-161 T 01-11-2018 DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 Pfam PF00128 Alpha amylase, catalytic domain 172 468 2.4E-83 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 SUPERFAMILY SSF51445 69 502 1.47E-123 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 3 120 2.1E-41 T 01-11-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 Gene3D G3DSA:2.60.40.1180 506 585 4.8E-20 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 Gene3D G3DSA:2.60.40.10 1 124 7.7E-40 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_06260 7b89903ee71c883091e4575d42876ed1 585 Pfam PF16657 Maltogenic Amylase, C-terminal domain 506 581 5.7E-13 T 01-11-2018 IPR032091 Maltogenic Amylase, C-terminal DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 SUPERFAMILY SSF81653 114 223 1.14E-30 T 01-11-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Pfam PF00122 E1-E2 ATPase 110 304 1.3E-55 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 71 3.3E-15 T 01-11-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 5.9E-41 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 541 5.9E-41 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 5.9E-41 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 5.9E-41 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 5.9E-41 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 5.9E-41 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Pfam PF00689 Cation transporting ATPase, C-terminus 716 881 3.3E-52 T 01-11-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 423 577 1.9E-19 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 208 346 3.6E-29 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 178 1.4E-19 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 598 722 6.8E-38 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 01-11-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 SMART SM00831 2 76 7.0E-23 T 01-11-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 646 2.0E-28 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 SUPERFAMILY SSF56784 322 736 1.19E-67 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 SUPERFAMILY SSF81665 2 881 4.58E-134 T 01-11-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 54 882 7.8E-214 T 01-11-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 1.1E-18 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 1.1E-18 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 1.1E-18 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 689 1.1E-18 T 01-11-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 SUPERFAMILY SSF81660 332 534 4.36E-59 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Gene3D G3DSA:3.40.50.1000 321 677 0.0 T 01-11-2018 IPR023214 HAD superfamily DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Gene3D G3DSA:2.70.150.10 15 227 0.0 T 01-11-2018 DOE78_07885 0ca4aad8fbd03a509ce03946983e64f1 892 Gene3D G3DSA:3.40.1110.10 334 537 0.0 T 01-11-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DOE78_07445 77b6e5930a58de50356eddff7df573c0 442 Gene3D G3DSA:3.40.50.300 231 441 2.7E-69 T 01-11-2018 DOE78_07445 77b6e5930a58de50356eddff7df573c0 442 Pfam PF13638 PIN domain 5 147 2.7E-32 T 01-11-2018 IPR002716 PIN domain DOE78_07445 77b6e5930a58de50356eddff7df573c0 442 Gene3D G3DSA:3.40.50.1010 2 149 1.0E-20 T 01-11-2018 DOE78_07445 77b6e5930a58de50356eddff7df573c0 442 Pfam PF02562 PhoH-like protein 233 436 6.4E-55 T 01-11-2018 IPR003714 PhoH-like protein GO:0005524 DOE78_07445 77b6e5930a58de50356eddff7df573c0 442 SUPERFAMILY SSF52540 23 422 6.9E-28 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07445 77b6e5930a58de50356eddff7df573c0 442 SMART SM00670 3 135 1.7E-23 T 01-11-2018 IPR002716 PIN domain DOE78_03520 53db8e2bdad12b5267dddd57a99085e0 516 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 336 498 5.8E-49 T 01-11-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DOE78_03520 53db8e2bdad12b5267dddd57a99085e0 516 PIRSF PIRSF001394 1 516 4.4E-193 T 01-11-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 DOE78_03520 53db8e2bdad12b5267dddd57a99085e0 516 Pfam PF05683 Fumarase C-terminus 309 499 4.7E-61 T 01-11-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DOE78_03520 53db8e2bdad12b5267dddd57a99085e0 516 Pfam PF05681 Fumarate hydratase (Fumerase) 8 284 7.6E-73 T 01-11-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DOE78_03520 53db8e2bdad12b5267dddd57a99085e0 516 SUPERFAMILY SSF117457 328 498 8.11E-50 T 01-11-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DOE78_03520 53db8e2bdad12b5267dddd57a99085e0 516 Gene3D G3DSA:3.20.130.10 313 498 1.8E-63 T 01-11-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DOE78_03520 53db8e2bdad12b5267dddd57a99085e0 516 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 7 282 1.5E-62 T 01-11-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 6 284 7.9E-107 T 01-11-2018 IPR014303 RNA polymerase sigma-70, ECF type DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 Pfam PF08281 Sigma-70, region 4 108 159 3.0E-10 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 SUPERFAMILY SSF88659 106 160 6.73E-10 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 160 8.8E-19 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 Gene3D G3DSA:1.10.1740.10 2 75 6.9E-12 T 01-11-2018 DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 SUPERFAMILY SSF88946 6 77 1.14E-13 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 Pfam PF04542 Sigma-70 region 2 8 70 1.1E-13 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 SUPERFAMILY SSF54427 170 283 8.77E-7 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_04195 70019c4fd2b02479dcf353b87f5b7ed5 286 Gene3D G3DSA:1.10.10.10 91 163 3.7E-9 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_00890 6cedb0f607474cc187780467615623e0 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.0E-65 T 01-11-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00890 6cedb0f607474cc187780467615623e0 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.202 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DOE78_00890 6cedb0f607474cc187780467615623e0 145 Gene3D G3DSA:3.90.1180.10 1 143 5.5E-63 T 01-11-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00890 6cedb0f607474cc187780467615623e0 145 PIRSF PIRSF002181 1 143 6.2E-52 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DOE78_00890 6cedb0f607474cc187780467615623e0 145 SUPERFAMILY SSF52161 5 143 6.28E-60 T 01-11-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00890 6cedb0f607474cc187780467615623e0 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 01-11-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 DOE78_00890 6cedb0f607474cc187780467615623e0 145 Pfam PF00572 Ribosomal protein L13 15 139 3.8E-58 T 01-11-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DOE78_21655 a5800da67dff2f18a4d021d212289b6f 461 Pfam PF13353 4Fe-4S single cluster domain 103 235 9.4E-12 T 01-11-2018 DOE78_21655 a5800da67dff2f18a4d021d212289b6f 461 SUPERFAMILY SSF102114 95 418 1.44E-57 T 01-11-2018 DOE78_21655 a5800da67dff2f18a4d021d212289b6f 461 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 349 433 4.3E-18 T 01-11-2018 IPR023885 4Fe4S-binding SPASM domain DOE78_21655 a5800da67dff2f18a4d021d212289b6f 461 Gene3D G3DSA:3.20.20.70 97 457 1.2E-73 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_21655 a5800da67dff2f18a4d021d212289b6f 461 Pfam PF04055 Radical SAM superfamily 104 249 7.4E-12 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_21655 a5800da67dff2f18a4d021d212289b6f 461 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 105 116 - T 01-11-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_21655 a5800da67dff2f18a4d021d212289b6f 461 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 2 453 3.3E-225 T 01-11-2018 IPR024025 SCIFF radical SAM maturase DOE78_09070 65281db48fc232f67cdca90769b2f849 408 Pfam PF00364 Biotin-requiring enzyme 4 76 3.1E-15 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_09070 65281db48fc232f67cdca90769b2f849 408 SUPERFAMILY SSF51230 1 88 5.23E-22 T 01-11-2018 IPR011053 Single hybrid motif DOE78_09070 65281db48fc232f67cdca90769b2f849 408 SUPERFAMILY SSF47005 113 157 5.49E-12 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_09070 65281db48fc232f67cdca90769b2f849 408 Gene3D G3DSA:3.30.559.10 168 406 5.1E-86 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DOE78_09070 65281db48fc232f67cdca90769b2f849 408 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 180 407 2.8E-82 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DOE78_09070 65281db48fc232f67cdca90769b2f849 408 Gene3D G3DSA:4.10.320.10 110 167 3.1E-17 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_09070 65281db48fc232f67cdca90769b2f849 408 SUPERFAMILY SSF52777 180 407 1.33E-79 T 01-11-2018 DOE78_09070 65281db48fc232f67cdca90769b2f849 408 Gene3D G3DSA:2.40.50.100 2 100 2.3E-23 T 01-11-2018 DOE78_09070 65281db48fc232f67cdca90769b2f849 408 Pfam PF02817 e3 binding domain 118 153 8.4E-15 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DOE78_13155 b79e5c11f0083bb3276e1722eb0675ca 291 SUPERFAMILY SSF55729 1 214 1.95E-26 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_13155 b79e5c11f0083bb3276e1722eb0675ca 291 Gene3D G3DSA:3.40.630.30 8 183 8.8E-23 T 01-11-2018 DOE78_13155 b79e5c11f0083bb3276e1722eb0675ca 291 Pfam PF00583 Acetyltransferase (GNAT) family 46 133 1.5E-11 T 01-11-2018 IPR000182 GNAT domain DOE78_01870 0943e672a2b1ed61326a2a9e6e158dc8 200 Gene3D G3DSA:3.40.50.170 1 200 6.2E-75 T 01-11-2018 DOE78_01870 0943e672a2b1ed61326a2a9e6e158dc8 200 SUPERFAMILY SSF53328 2 196 2.22E-60 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_01870 0943e672a2b1ed61326a2a9e6e158dc8 200 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 3.1E-71 T 01-11-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DOE78_01870 0943e672a2b1ed61326a2a9e6e158dc8 200 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 01-11-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_01870 0943e672a2b1ed61326a2a9e6e158dc8 200 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.89 T 01-11-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DOE78_01870 0943e672a2b1ed61326a2a9e6e158dc8 200 Pfam PF00551 Formyl transferase 2 182 4.1E-58 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 Gene3D G3DSA:3.40.50.2300 399 485 6.1E-7 T 01-11-2018 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 Gene3D G3DSA:3.40.930.10 537 683 4.9E-45 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 SUPERFAMILY SSF55804 538 681 1.44E-32 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 588 604 - T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 Pfam PF05043 Mga helix-turn-helix domain 83 161 4.6E-5 T 01-11-2018 IPR007737 Mga helix-turn-helix domain DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 SUPERFAMILY SSF63520 180 275 6.02E-9 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 SUPERFAMILY SSF63520 292 389 1.83E-17 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 542 680 1.3E-30 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 Pfam PF00874 PRD domain 300 387 8.2E-17 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 Pfam PF00874 PRD domain 196 275 1.2E-6 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 SUPERFAMILY SSF52794 398 483 6.8E-7 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_22600 15fac2a37a1a4396da329e1797577fa5 684 Gene3D G3DSA:1.10.1790.10 288 390 1.0E-11 T 01-11-2018 DOE78_17420 04112b4a0298ae2c41617252decae3bf 397 PIRSF PIRSF029895 1 397 1.2E-154 T 01-11-2018 IPR010690 Putative stage IV sporulation YqfD DOE78_17420 04112b4a0298ae2c41617252decae3bf 397 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 385 1.5E-119 T 01-11-2018 IPR010690 Putative stage IV sporulation YqfD DOE78_17420 04112b4a0298ae2c41617252decae3bf 397 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 6 387 4.2E-119 T 01-11-2018 IPR010690 Putative stage IV sporulation YqfD DOE78_13560 2bc044b807b5c5fbe3b51e91fc0bc456 289 SUPERFAMILY SSF51735 1 280 6.72E-31 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13560 2bc044b807b5c5fbe3b51e91fc0bc456 289 Gene3D G3DSA:3.40.50.720 1 287 7.5E-30 T 01-11-2018 DOE78_13560 2bc044b807b5c5fbe3b51e91fc0bc456 289 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 208 4.0E-9 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_13700 77bd2b89d99e53f415f134956b4118c3 471 Pfam PF13786 Domain of unknown function (DUF4179) 38 126 3.3E-14 T 01-11-2018 IPR025436 Domain of unknown function DUF4179 DOE78_13700 77bd2b89d99e53f415f134956b4118c3 471 Gene3D G3DSA:2.60.40.1640 225 361 8.4E-7 T 01-11-2018 DOE78_13700 77bd2b89d99e53f415f134956b4118c3 471 Gene3D G3DSA:2.60.40.1630 71 216 1.4E-14 T 01-11-2018 DOE78_21845 3c737e83971c33f298bf9f560062395a 333 SUPERFAMILY SSF81345 29 244 1.29E-5 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_21845 3c737e83971c33f298bf9f560062395a 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 325 1.0E-42 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 SUPERFAMILY SSF55021 296 358 2.11E-8 T 01-11-2018 DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 3.7E-86 T 01-11-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 SUPERFAMILY SSF53633 1 290 1.15E-67 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 SUPERFAMILY SSF55021 371 449 7.75E-23 T 01-11-2018 DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 Pfam PF00696 Amino acid kinase family 2 276 3.5E-39 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 PIRSF PIRSF000726 1 452 3.6E-80 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 Gene3D G3DSA:3.40.1160.10 1 289 3.2E-75 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 Pfam PF13840 ACT domain 380 445 4.3E-9 T 01-11-2018 IPR027795 CASTOR, ACT domain DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 Gene3D G3DSA:3.30.2130.10 290 451 1.6E-56 T 01-11-2018 DOE78_14810 b5be5dea439cba55bb608c0fb430aa19 453 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 01-11-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_14110 7bfc9522698120fc50f838898f5cfe8f 458 PIRSF PIRSF006060 1 452 7.9E-74 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_14110 7bfc9522698120fc50f838898f5cfe8f 458 Pfam PF00324 Amino acid permease 16 405 3.2E-35 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_14110 7bfc9522698120fc50f838898f5cfe8f 458 Gene3D G3DSA:1.20.1740.10 7 452 2.6E-76 T 01-11-2018 DOE78_11955 6822f018bcafd8dc5b2b3fc1df6f0472 313 Gene3D G3DSA:1.10.3720.10 71 312 2.7E-69 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11955 6822f018bcafd8dc5b2b3fc1df6f0472 313 SUPERFAMILY SSF160964 32 63 3.01E-5 T 01-11-2018 DOE78_11955 6822f018bcafd8dc5b2b3fc1df6f0472 313 SUPERFAMILY SSF161098 75 302 2.75E-61 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11955 6822f018bcafd8dc5b2b3fc1df6f0472 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 2.2E-12 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_06415 1baf76251e9d88c1d13e8585fa88e68b 268 Pfam PF00326 Prolyl oligopeptidase family 89 255 3.7E-10 T 01-11-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DOE78_06415 1baf76251e9d88c1d13e8585fa88e68b 268 Gene3D G3DSA:3.40.50.1820 1 257 1.0E-59 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06415 1baf76251e9d88c1d13e8585fa88e68b 268 SUPERFAMILY SSF53474 19 255 1.86E-38 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 879 3.3E-23 T 01-11-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 879 16.243 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 SUPERFAMILY SSF47323 577 829 3.55E-77 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 861 0.0 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 564 2.3E-225 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Gene3D G3DSA:1.10.287.380 807 879 7.1E-21 T 01-11-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Gene3D G3DSA:1.10.730.10 8 742 0.0 T 01-11-2018 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 SUPERFAMILY SSF52374 6 575 7.89E-144 T 01-11-2018 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Gene3D G3DSA:3.40.50.620 28 526 0.0 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 9.2E-39 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 9.2E-39 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 9.2E-39 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 PRINTS PR00986 Valyl-tRNA synthetase signature 445 466 9.2E-39 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 PRINTS PR00986 Valyl-tRNA synthetase signature 477 495 9.2E-39 T 01-11-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 SUPERFAMILY SSF50677 197 347 2.88E-64 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Pfam PF08264 Anticodon-binding domain of tRNA 608 752 1.5E-42 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 Gene3D G3DSA:3.90.740.10 181 347 0.0 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DOE78_18015 8b51483a506733e0405ad92268cf91ec 881 SUPERFAMILY SSF46589 814 878 5.75E-16 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 SUPERFAMILY SSF52518 339 523 7.69E-69 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 336 5.0E-148 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 SUPERFAMILY SSF52518 3 323 1.54E-112 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 SMART SM00861 352 523 1.9E-70 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 Pfam PF02779 Transketolase, pyrimidine binding domain 352 522 1.2E-46 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 Gene3D G3DSA:3.40.50.970 2 328 2.1E-122 T 01-11-2018 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 ProSitePatterns PS00801 Transketolase signature 1. 10 30 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 ProSitePatterns PS00802 Transketolase signature 2. 465 481 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 Gene3D G3DSA:3.40.50.970 329 532 1.0E-78 T 01-11-2018 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 660 8.8E-279 T 01-11-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 SUPERFAMILY SSF52922 531 662 1.19E-33 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_04360 1aab9dff60ff1649920ce3d580d95886 662 Gene3D G3DSA:3.40.50.920 537 662 2.3E-37 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 SUPERFAMILY SSF89095 294 399 1.66E-35 T 01-11-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 472 3.8E-179 T 01-11-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 Pfam PF02934 GatB/GatE catalytic domain 5 284 4.5E-112 T 01-11-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 SMART SM00845 325 472 3.8E-81 T 01-11-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 Pfam PF02637 GatB domain 325 472 1.4E-56 T 01-11-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 Gene3D G3DSA:1.10.150.380 297 410 4.7E-37 T 01-11-2018 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 SUPERFAMILY SSF55931 4 293 2.62E-121 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 473 38.558 T 01-11-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 Gene3D G3DSA:1.10.10.410 412 475 9.9E-27 T 01-11-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DOE78_01970 6577ecf1626e82308c46e92963a157c5 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 01-11-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 DOE78_03945 773c127a6593af957ad9f3813265b955 1058 Gene3D G3DSA:3.40.50.300 816 1016 7.0E-83 T 01-11-2018 DOE78_03945 773c127a6593af957ad9f3813265b955 1058 SMART SM00487 602 797 2.0E-27 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_03945 773c127a6593af957ad9f3813265b955 1058 Pfam PF00176 SNF2 family N-terminal domain 623 880 5.6E-50 T 01-11-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DOE78_03945 773c127a6593af957ad9f3813265b955 1058 SUPERFAMILY SSF52540 810 1057 8.05E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03945 773c127a6593af957ad9f3813265b955 1058 Pfam PF00271 Helicase conserved C-terminal domain 891 1002 3.3E-22 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_03945 773c127a6593af957ad9f3813265b955 1058 Gene3D G3DSA:1.20.120.850 830 1052 7.0E-83 T 01-11-2018 DOE78_03945 773c127a6593af957ad9f3813265b955 1058 SMART SM00490 920 1002 1.1E-25 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_03945 773c127a6593af957ad9f3813265b955 1058 Gene3D G3DSA:3.40.50.10810 576 815 3.9E-58 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily DOE78_03945 773c127a6593af957ad9f3813265b955 1058 Pfam PF08455 Bacterial SNF2 helicase associated 227 599 6.5E-89 T 01-11-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial DOE78_03945 773c127a6593af957ad9f3813265b955 1058 SUPERFAMILY SSF52540 585 808 6.44E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_10960 73e3015480f0624c13bb7cea2395cf21 176 SUPERFAMILY SSF55729 2 171 3.04E-45 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10960 73e3015480f0624c13bb7cea2395cf21 176 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 2.1E-28 T 01-11-2018 IPR000182 GNAT domain DOE78_10960 73e3015480f0624c13bb7cea2395cf21 176 Gene3D G3DSA:3.40.630.30 1 172 2.8E-44 T 01-11-2018 DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 Pfam PF00270 DEAD/DEAH box helicase 28 196 7.4E-41 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 Pfam PF00271 Helicase conserved C-terminal domain 237 341 1.6E-26 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 Gene3D G3DSA:3.40.50.300 2 218 8.4E-66 T 01-11-2018 DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 436 50.405 T 01-11-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 SMART SM00487 23 224 6.2E-50 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 SUPERFAMILY SSF52540 72 361 1.69E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 Gene3D G3DSA:3.40.50.300 219 436 5.6E-50 T 01-11-2018 DOE78_17305 dd07a3477c8ae2c0974e76daf1e4886b 436 SMART SM00490 260 341 4.0E-30 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 49 63 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 127 141 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 269 281 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 141 160 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 89 104 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 171 183 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 192 209 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 PRINTS PR00819 CbxX/CfqX superfamily signature 209 228 7.9E-61 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 SUPERFAMILY SSF52540 44 293 6.23E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 90 220 1.8E-18 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 Gene3D G3DSA:1.10.8.60 222 311 6.8E-21 T 01-11-2018 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 Gene3D G3DSA:3.40.50.300 34 221 1.7E-55 T 01-11-2018 DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 46 307 2.3E-133 T 01-11-2018 IPR014232 Sporulation stage V, protein K DOE78_08640 15abb76da0cc02a9a597fee4cc209025 313 SMART SM00382 86 224 3.5E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 SUPERFAMILY SSF51161 3 168 1.1E-57 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 Gene3D G3DSA:1.10.3130.10 1 66 1.6E-24 T 01-11-2018 DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 4.3E-4 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 6.9E-8 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 7.6E-79 T 01-11-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 PIRSF PIRSF000441 1 218 9.9E-85 T 01-11-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DOE78_00595 758335c1712fabf0db4a4f8ba490bd34 222 Gene3D G3DSA:2.160.10.10 67 183 8.4E-38 T 01-11-2018 DOE78_22525 e1bc6e1a0a8d24ff89da6c58cca7b10c 237 SUPERFAMILY SSF52172 2 132 8.68E-34 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_22525 e1bc6e1a0a8d24ff89da6c58cca7b10c 237 Gene3D G3DSA:1.10.10.10 141 236 4.7E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22525 e1bc6e1a0a8d24ff89da6c58cca7b10c 237 Pfam PF00072 Response regulator receiver domain 4 115 1.2E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_22525 e1bc6e1a0a8d24ff89da6c58cca7b10c 237 SMART SM00448 2 115 5.5E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_22525 e1bc6e1a0a8d24ff89da6c58cca7b10c 237 Gene3D G3DSA:3.40.50.2300 1 139 6.9E-31 T 01-11-2018 DOE78_22525 e1bc6e1a0a8d24ff89da6c58cca7b10c 237 PIRSF PIRSF006171 1 229 1.1E-73 T 01-11-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DOE78_22525 e1bc6e1a0a8d24ff89da6c58cca7b10c 237 SUPERFAMILY SSF46785 172 230 5.77E-5 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04755 a362630681d0f5177929176925ea88ec 644 Gene3D G3DSA:3.30.930.10 227 534 1.0E-132 T 01-11-2018 DOE78_04755 a362630681d0f5177929176925ea88ec 644 SUPERFAMILY SSF55681 247 529 7.47E-92 T 01-11-2018 DOE78_04755 a362630681d0f5177929176925ea88ec 644 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 79 634 1.7E-235 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 SUPERFAMILY SSF52954 530 636 1.81E-31 T 01-11-2018 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Gene3D G3DSA:3.30.980.10 76 226 3.8E-66 T 01-11-2018 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Gene3D G3DSA:3.30.54.20 137 191 3.8E-66 T 01-11-2018 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 327 531 2.5E-41 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 223 1.3E-17 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_04755 a362630681d0f5177929176925ea88ec 644 SMART SM00863 174 223 1.0E-23 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 73 638 34.699 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 SUPERFAMILY SSF55186 70 245 1.06E-66 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Pfam PF03129 Anticodon binding domain 544 634 1.5E-21 T 01-11-2018 IPR004154 Anticodon-binding DOE78_04755 a362630681d0f5177929176925ea88ec 644 Pfam PF02824 TGS domain 9 67 7.2E-10 T 01-11-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Gene3D G3DSA:3.10.20.30 6 68 1.6E-20 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_04755 a362630681d0f5177929176925ea88ec 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 537 549 1.3E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 510 523 1.3E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 1.3E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 467 495 1.3E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 1.3E-53 T 01-11-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DOE78_04755 a362630681d0f5177929176925ea88ec 644 Gene3D G3DSA:3.40.50.800 535 642 5.9E-33 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily DOE78_04755 a362630681d0f5177929176925ea88ec 644 SUPERFAMILY SSF81271 9 67 3.49E-13 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DOE78_15525 5fc41bb4e9ed15384bf45acdf5b4d0d1 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 238 15.03 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_15525 5fc41bb4e9ed15384bf45acdf5b4d0d1 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.1E-35 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_15525 5fc41bb4e9ed15384bf45acdf5b4d0d1 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 1.1E-35 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_15525 5fc41bb4e9ed15384bf45acdf5b4d0d1 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 1.1E-35 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_15525 5fc41bb4e9ed15384bf45acdf5b4d0d1 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 1.1E-35 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_15525 5fc41bb4e9ed15384bf45acdf5b4d0d1 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 4.5E-55 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_15525 5fc41bb4e9ed15384bf45acdf5b4d0d1 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 3.7E-55 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 SMART SM00419 163 211 6.0E-15 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 Pfam PF00027 Cyclic nucleotide-binding domain 27 111 2.8E-18 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 SMART SM00100 5 124 1.9E-15 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 ProSitePatterns PS00042 Crp-type HTH domain signature. 171 194 - T 01-11-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 SUPERFAMILY SSF51206 23 139 1.96E-28 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 200 2.0E-6 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 169 185 2.0E-6 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 Gene3D G3DSA:2.60.120.10 4 140 1.9E-28 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 Pfam PF13545 Crp-like helix-turn-helix domain 146 217 7.8E-19 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 SUPERFAMILY SSF46785 142 224 4.92E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_06430 0e4d47c93d8aaddf045b76a56e9b0410 232 Gene3D G3DSA:1.10.10.10 141 230 4.5E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Gene3D G3DSA:3.40.50.1110 171 398 7.5E-68 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SUPERFAMILY SSF69318 923 1390 2.22E-12 T 01-11-2018 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Gene3D G3DSA:2.60.40.10 824 912 4.2E-28 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SUPERFAMILY SSF49785 25 163 2.64E-26 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 176 332 1.3E-12 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SUPERFAMILY SSF52266 171 393 2.2E-51 T 01-11-2018 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SUPERFAMILY SSF49265 650 816 2.94E-14 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SUPERFAMILY SSF49265 397 489 1.3E-15 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Pfam PF00041 Fibronectin type III domain 404 481 1.8E-6 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Gene3D G3DSA:2.60.40.10 399 485 5.0E-13 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SUPERFAMILY SSF49785 494 634 9.35E-28 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Gene3D G3DSA:2.60.120.430 11 168 3.0E-31 T 01-11-2018 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Gene3D G3DSA:2.60.120.430 486 636 6.7E-34 T 01-11-2018 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Gene3D G3DSA:2.60.40.10 731 823 9.3E-18 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 Gene3D G3DSA:2.60.40.10 637 727 6.5E-14 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SMART SM00060 733 809 0.0016 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SMART SM00060 402 478 5.1E-7 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_10515 57dbea7f4b330246e63f02c283335c7a 1672 SMART SM00060 634 714 4.3 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_07675 a7cd15d8a68bea846a9398274c4e58f4 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 1.0E-65 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DOE78_07675 a7cd15d8a68bea846a9398274c4e58f4 143 SUPERFAMILY SSF89447 1 136 8.06E-53 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily DOE78_07675 a7cd15d8a68bea846a9398274c4e58f4 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 58.728 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DOE78_07675 a7cd15d8a68bea846a9398274c4e58f4 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 3.7E-61 T 01-11-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DOE78_07675 a7cd15d8a68bea846a9398274c4e58f4 143 Gene3D G3DSA:2.40.330.20 1 141 2.5E-54 T 01-11-2018 IPR038619 MraZ superfamily DOE78_07675 a7cd15d8a68bea846a9398274c4e58f4 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 4.0E-26 T 01-11-2018 IPR020603 MraZ domain DOE78_07675 a7cd15d8a68bea846a9398274c4e58f4 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 4.4E-24 T 01-11-2018 IPR020603 MraZ domain DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 Gene3D G3DSA:3.30.565.10 446 596 4.9E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 591 5.0E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 Gene3D G3DSA:1.20.1480.50 288 379 3.3E-10 T 01-11-2018 DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 SMART SM00304 322 374 6.5E-4 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 SUPERFAMILY SSF55874 441 590 5.11E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 Pfam PF06580 Histidine kinase 387 465 5.2E-22 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 Pfam PF02743 Cache domain 36 283 1.5E-15 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_13870 eb99cb1f8baeda762e10dd466cf37489 603 SUPERFAMILY SSF158472 324 373 2.88E-7 T 01-11-2018 DOE78_12370 ec5822cfb3bd078e1daf19a1d1b9e4ca 164 Gene3D G3DSA:3.60.21.10 1 159 1.0E-46 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_12370 ec5822cfb3bd078e1daf19a1d1b9e4ca 164 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 152 1.7E-30 T 01-11-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DOE78_12370 ec5822cfb3bd078e1daf19a1d1b9e4ca 164 SUPERFAMILY SSF56300 1 153 1.36E-36 T 01-11-2018 DOE78_12370 ec5822cfb3bd078e1daf19a1d1b9e4ca 164 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 152 2.2E-35 T 01-11-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 DOE78_11570 677f3467b65b699c3e99efb840e42ed3 300 Gene3D G3DSA:1.10.8.60 212 278 2.1E-5 T 01-11-2018 DOE78_11570 677f3467b65b699c3e99efb840e42ed3 300 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 75 199 2.0E-29 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_11570 677f3467b65b699c3e99efb840e42ed3 300 SUPERFAMILY SSF52540 22 269 3.45E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11570 677f3467b65b699c3e99efb840e42ed3 300 Gene3D G3DSA:3.40.50.300 14 211 7.3E-44 T 01-11-2018 DOE78_11570 677f3467b65b699c3e99efb840e42ed3 300 SMART SM00382 69 202 4.5E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 159 3.6E-18 T 01-11-2018 IPR016188 PurM-like, N-terminal domain DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 SUPERFAMILY SSF55326 3 166 8.07E-53 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 Gene3D G3DSA:3.30.1330.10 1 167 1.5E-70 T 01-11-2018 IPR036921 PurM-like, N-terminal domain superfamily DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 338 47.936 T 01-11-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 Gene3D G3DSA:3.90.650.10 168 341 1.5E-70 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 337 1.0E-37 T 01-11-2018 IPR010918 PurM-like, C-terminal domain DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 SUPERFAMILY SSF56042 168 338 1.64E-59 T 01-11-2018 IPR036676 PurM-like, C-terminal domain superfamily DOE78_01865 56534e6087fd8a7fc1d5c371ac412f1c 341 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 1.5E-143 T 01-11-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 SUPERFAMILY SSF50249 7 84 9.42E-32 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 6.5E-36 T 01-11-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 Pfam PF00366 Ribosomal protein S17 12 79 6.2E-33 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 01-11-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.4E-12 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.4E-12 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.4E-12 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 1.0E-32 T 01-11-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 24.639 T 01-11-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00770 00cfff6feb757a60fc14f913ec7d142a 87 Gene3D G3DSA:2.40.50.140 6 85 7.1E-36 T 01-11-2018 DOE78_07310 cd6bc1a9f2877f3f361571308f5b7c58 219 Gene3D G3DSA:3.40.50.720 1 136 4.5E-40 T 01-11-2018 DOE78_07310 cd6bc1a9f2877f3f361571308f5b7c58 219 SUPERFAMILY SSF116726 131 215 4.58E-21 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_07310 cd6bc1a9f2877f3f361571308f5b7c58 219 Gene3D G3DSA:3.30.70.1450 137 217 9.3E-28 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_07310 cd6bc1a9f2877f3f361571308f5b7c58 219 SUPERFAMILY SSF51735 4 134 5.59E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_07310 cd6bc1a9f2877f3f361571308f5b7c58 219 Pfam PF02080 TrkA-C domain 150 216 5.4E-15 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DOE78_07310 cd6bc1a9f2877f3f361571308f5b7c58 219 Pfam PF02254 TrkA-N domain 5 120 1.3E-31 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DOE78_06345 d546943ccae3e4128bcc8ecc5d9f2f46 389 Pfam PF07690 Major Facilitator Superfamily 14 323 1.1E-29 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_06345 d546943ccae3e4128bcc8ecc5d9f2f46 389 Gene3D G3DSA:1.20.1250.20 2 375 1.2E-36 T 01-11-2018 DOE78_06345 d546943ccae3e4128bcc8ecc5d9f2f46 389 SUPERFAMILY SSF103473 4 378 4.45E-47 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_20550 651c676defde2118154623bd5e18ecce 391 Pfam PF14907 Uncharacterised nucleotidyltransferase 38 285 2.7E-62 T 01-11-2018 IPR039498 Uncharacterised nucleotidyltransferase DOE78_20550 651c676defde2118154623bd5e18ecce 391 SUPERFAMILY SSF81301 127 248 3.27E-6 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Gene3D G3DSA:3.30.420.40 10 364 7.4E-115 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 SUPERFAMILY SSF53067 6 193 1.81E-58 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 4.3E-127 T 01-11-2018 IPR020823 Cell division protein FtsA DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Gene3D G3DSA:3.90.640.10 233 298 7.4E-115 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Pfam PF14450 Cell division protein FtsA 205 366 2.1E-25 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 SMART SM00842 7 194 2.9E-94 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Pfam PF02491 SHS2 domain inserted in FTSA 81 160 4.6E-28 T 01-11-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 426 31.095 T 01-11-2018 IPR020823 Cell division protein FtsA DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 01-11-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Gene3D G3DSA:3.30.420.40 195 349 7.4E-115 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Gene3D G3DSA:3.30.1490.110 83 167 7.4E-115 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 PIRSF PIRSF003101 1 426 2.5E-151 T 01-11-2018 IPR020823 Cell division protein FtsA DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 SUPERFAMILY SSF53067 197 368 6.22E-43 T 01-11-2018 DOE78_07750 222af9c21e0c4d38efd1d833365e8306 427 Pfam PF14450 Cell division protein FtsA 9 187 9.4E-9 T 01-11-2018 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SUPERFAMILY SSF55785 4 114 1.24E-17 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SMART SM00331 276 485 8.0E-19 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 Gene3D G3DSA:3.30.450.20 131 275 1.1E-44 T 01-11-2018 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 Pfam PF00989 PAS fold 5 97 8.6E-13 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 Gene3D G3DSA:3.60.40.10 276 485 6.0E-39 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SMART SM00086 206 248 5.1E-9 T 01-11-2018 IPR001610 PAC motif DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SMART SM00086 78 116 61.0 T 01-11-2018 IPR001610 PAC motif DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SMART SM00091 131 200 0.045 T 01-11-2018 IPR000014 PAS domain DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SMART SM00091 4 72 8.8E-8 T 01-11-2018 IPR000014 PAS domain DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SUPERFAMILY SSF55785 136 246 3.89E-26 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 SUPERFAMILY SSF81606 289 483 1.28E-6 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 303 484 3.9E-26 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 Pfam PF13426 PAS domain 144 247 2.8E-22 T 01-11-2018 IPR000014 PAS domain DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 Gene3D G3DSA:3.30.450.20 1 130 8.4E-21 T 01-11-2018 DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 120 1.0E-17 T 01-11-2018 IPR000014 PAS domain DOE78_09545 13814dac0e31b618d50beae09d2d64f3 486 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 253 1.7E-15 T 01-11-2018 IPR000014 PAS domain DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 12 590 2.4E-181 T 01-11-2018 IPR014143 DNA ligase D DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 SUPERFAMILY SSF56091 2 206 8.35E-33 T 01-11-2018 DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 182 206 - T 01-11-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 Gene3D G3DSA:3.90.920.30 330 601 3.9E-83 T 01-11-2018 DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 SUPERFAMILY SSF50249 222 312 5.14E-5 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 Pfam PF01068 ATP dependent DNA ligase domain 14 206 3.3E-31 T 01-11-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 322 562 5.6E-89 T 01-11-2018 IPR014145 DNA ligase D, polymerase domain DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 4 307 2.4E-72 T 01-11-2018 IPR014146 DNA ligase D, ligase domain DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 Gene3D G3DSA:3.30.470.30 1 205 7.5E-35 T 01-11-2018 DOE78_15205 fc6dc3ed34d1fd1aefc6f0381a4b6d4f 609 Gene3D G3DSA:2.40.50.140 212 309 2.5E-6 T 01-11-2018 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 SUPERFAMILY SSF55957 448 575 3.4E-15 T 01-11-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Gene3D G3DSA:3.40.120.10 33 190 7.9E-48 T 01-11-2018 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 250 3.3E-7 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 298 313 3.3E-7 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 3.3E-7 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Gene3D G3DSA:3.40.120.10 326 454 2.9E-38 T 01-11-2018 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 SUPERFAMILY SSF53738 209 317 3.22E-20 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Gene3D G3DSA:3.40.120.10 209 325 7.4E-23 T 01-11-2018 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 181 1.7E-40 T 01-11-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 504 552 5.4E-9 T 01-11-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 SUPERFAMILY SSF53738 32 238 1.02E-47 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 326 453 1.5E-24 T 01-11-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Gene3D G3DSA:3.30.310.50 484 571 4.4E-9 T 01-11-2018 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 01-11-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 316 2.8E-23 T 01-11-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_23105 de9e29b69df1f224a46361977ef90126 580 SUPERFAMILY SSF53738 306 457 7.46E-33 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_09050 8761a2de31871408898b11768922e563 567 Gene3D G3DSA:1.20.140.10 249 409 3.4E-125 T 01-11-2018 DOE78_09050 8761a2de31871408898b11768922e563 567 Gene3D G3DSA:1.20.140.10 430 567 9.0E-22 T 01-11-2018 DOE78_09050 8761a2de31871408898b11768922e563 567 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 146 158 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_09050 8761a2de31871408898b11768922e563 567 Gene3D G3DSA:2.40.110.10 143 248 3.4E-125 T 01-11-2018 DOE78_09050 8761a2de31871408898b11768922e563 567 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 237 1.5E-20 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DOE78_09050 8761a2de31871408898b11768922e563 567 Gene3D G3DSA:1.10.540.10 35 142 3.4E-125 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_09050 8761a2de31871408898b11768922e563 567 SUPERFAMILY SSF47203 253 425 8.22E-44 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_09050 8761a2de31871408898b11768922e563 567 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 411 2.0E-36 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DOE78_09050 8761a2de31871408898b11768922e563 567 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 29 140 1.3E-24 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DOE78_09050 8761a2de31871408898b11768922e563 567 SUPERFAMILY SSF56645 23 260 2.62E-66 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_10700 e78308edb0767c32ceb42deede7fb120 263 Gene3D G3DSA:3.40.190.10 41 256 3.7E-67 T 01-11-2018 DOE78_10700 e78308edb0767c32ceb42deede7fb120 263 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 67 80 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site DOE78_10700 e78308edb0767c32ceb42deede7fb120 263 SUPERFAMILY SSF53850 1 262 5.28E-69 T 01-11-2018 DOE78_10700 e78308edb0767c32ceb42deede7fb120 263 Gene3D G3DSA:3.40.190.10 132 223 3.7E-67 T 01-11-2018 DOE78_10700 e78308edb0767c32ceb42deede7fb120 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 262 1.2E-60 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_10700 e78308edb0767c32ceb42deede7fb120 263 SMART SM00079 42 263 7.7E-5 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DOE78_10700 e78308edb0767c32ceb42deede7fb120 263 SMART SM00062 42 263 3.1E-67 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_14155 6743093fda16f0d0dc0bac4d70ef94dd 479 Gene3D G3DSA:3.40.605.10 26 454 1.5E-139 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_14155 6743093fda16f0d0dc0bac4d70ef94dd 479 Gene3D G3DSA:3.40.309.10 230 415 1.5E-139 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_14155 6743093fda16f0d0dc0bac4d70ef94dd 479 SUPERFAMILY SSF53720 20 457 1.28E-56 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_14155 6743093fda16f0d0dc0bac4d70ef94dd 479 Pfam PF00171 Aldehyde dehydrogenase family 12 280 8.1E-19 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_05240 28dfb7208cfb1f67bf72ce751f6aadf5 136 Gene3D G3DSA:1.10.287.70 30 134 4.0E-14 T 01-11-2018 DOE78_05240 28dfb7208cfb1f67bf72ce751f6aadf5 136 Pfam PF07885 Ion channel 81 131 2.2E-12 T 01-11-2018 IPR013099 Potassium channel domain DOE78_05240 28dfb7208cfb1f67bf72ce751f6aadf5 136 SUPERFAMILY SSF81324 18 129 6.84E-15 T 01-11-2018 DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 PIRSF PIRSF005814 1 561 5.6E-189 T 01-11-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 Gene3D G3DSA:3.40.50.300 289 566 8.5E-72 T 01-11-2018 DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 SUPERFAMILY SSF48334 22 284 4.45E-17 T 01-11-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 SMART SM00533 13 311 1.1E-5 T 01-11-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 SMART SM00534 323 508 1.2E-64 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 Pfam PF00488 MutS domain V 326 507 6.3E-35 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_09750 02182bdafe8f9ad2b879b2289003e016 642 SUPERFAMILY SSF52540 293 511 5.07E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09835 bce01427466f026a556cd2f096784e1d 412 SUPERFAMILY SSF47384 184 250 1.24E-13 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 Gene3D G3DSA:3.30.565.10 252 408 1.6E-45 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_09835 bce01427466f026a556cd2f096784e1d 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 192 250 7.2E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 400 3.9E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_09835 bce01427466f026a556cd2f096784e1d 412 Pfam PF00989 PAS fold 64 172 5.5E-9 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 Gene3D G3DSA:1.10.287.130 176 251 1.7E-18 T 01-11-2018 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 SUPERFAMILY SSF55874 244 400 8.91E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_09835 bce01427466f026a556cd2f096784e1d 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 5.4E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 380 5.4E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 361 5.4E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 399 5.4E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 SMART SM00387 295 402 6.2E-32 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_09835 bce01427466f026a556cd2f096784e1d 412 SMART SM00388 191 253 3.9E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 Gene3D G3DSA:3.30.450.20 49 173 2.0E-16 T 01-11-2018 DOE78_09835 bce01427466f026a556cd2f096784e1d 412 SUPERFAMILY SSF55785 51 173 3.14E-14 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_09835 bce01427466f026a556cd2f096784e1d 412 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 60 181 1.5E-13 T 01-11-2018 IPR000014 PAS domain DOE78_17670 bdbfc64b302f3d1757a16a9a53cfc0f1 212 Pfam PF01596 O-methyltransferase 20 211 3.2E-38 T 01-11-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 DOE78_17670 bdbfc64b302f3d1757a16a9a53cfc0f1 212 Gene3D G3DSA:3.40.50.150 1 212 3.0E-62 T 01-11-2018 DOE78_17670 bdbfc64b302f3d1757a16a9a53cfc0f1 212 SUPERFAMILY SSF53335 6 212 8.13E-38 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Gene3D G3DSA:1.10.150.110 1 84 3.3E-18 T 01-11-2018 IPR027421 DNA polymerase lambda lyase domain superfamily DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Pfam PF14520 Helix-hairpin-helix domain 92 145 4.3E-6 T 01-11-2018 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SUPERFAMILY SSF47802 5 83 2.75E-18 T 01-11-2018 IPR027421 DNA polymerase lambda lyase domain superfamily DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SMART SM00278 90 109 27.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SMART SM00278 50 69 8.3 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SMART SM00278 125 144 100.0 T 01-11-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Gene3D G3DSA:3.20.20.140 328 574 4.5E-78 T 01-11-2018 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Pfam PF14716 Helix-hairpin-helix domain 6 71 1.1E-17 T 01-11-2018 IPR010996 DNA polymerase beta-like, N-terminal domain DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SMART SM00483 2 316 3.9E-64 T 01-11-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Gene3D G3DSA:3.30.460.10 154 260 7.7E-24 T 01-11-2018 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Pfam PF02811 PHP domain 339 464 4.1E-10 T 01-11-2018 IPR004013 PHP domain GO:0003824 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SUPERFAMILY SSF81301 154 316 4.25E-45 T 01-11-2018 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Gene3D G3DSA:1.10.150.20 85 149 1.2E-18 T 01-11-2018 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 PIRSF PIRSF005047 3 572 1.2E-237 T 01-11-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SMART SM00481 338 417 3.1E-22 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE78_18280 f677d14218fe25de93130e2cfe871517 576 SUPERFAMILY SSF89550 336 572 3.4E-57 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Pfam PF14791 DNA polymerase beta thumb 255 316 1.1E-19 T 01-11-2018 IPR029398 DNA polymerase beta, thumb domain DOE78_18280 f677d14218fe25de93130e2cfe871517 576 Gene3D G3DSA:3.30.210.10 261 325 2.6E-18 T 01-11-2018 IPR037160 DNA polymerase, thumb domain superfamily DOE78_21550 b3600ddadc767bb77be7de6b95619792 275 Gene3D G3DSA:3.10.200.10 48 275 7.6E-84 T 01-11-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DOE78_21550 b3600ddadc767bb77be7de6b95619792 275 SUPERFAMILY SSF51069 50 273 9.04E-74 T 01-11-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DOE78_21550 b3600ddadc767bb77be7de6b95619792 275 SMART SM01057 51 273 3.3E-93 T 01-11-2018 IPR001148 Alpha carbonic anhydrase domain DOE78_21550 b3600ddadc767bb77be7de6b95619792 275 Pfam PF00194 Eukaryotic-type carbonic anhydrase 50 274 2.0E-54 T 01-11-2018 IPR001148 Alpha carbonic anhydrase domain DOE78_20580 c6298b06575e6d4619ed4dcf33d9cef5 286 SUPERFAMILY SSF103481 211 285 1.96E-13 T 01-11-2018 DOE78_20580 c6298b06575e6d4619ed4dcf33d9cef5 286 Pfam PF00892 EamA-like transporter family 151 285 4.5E-21 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_20580 c6298b06575e6d4619ed4dcf33d9cef5 286 Pfam PF00892 EamA-like transporter family 2 136 1.7E-20 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_20580 c6298b06575e6d4619ed4dcf33d9cef5 286 SUPERFAMILY SSF103481 36 137 1.06E-8 T 01-11-2018 DOE78_04430 62a9b51e840697600028315a11391ed9 406 SUPERFAMILY SSF103473 4 391 7.19E-48 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_04430 62a9b51e840697600028315a11391ed9 406 Gene3D G3DSA:1.20.1250.20 2 392 6.8E-41 T 01-11-2018 DOE78_04430 62a9b51e840697600028315a11391ed9 406 Pfam PF07690 Major Facilitator Superfamily 22 314 2.4E-28 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_14840 40620984973584ad4860354a0b9a89d6 328 Pfam PF00107 Zinc-binding dehydrogenase 161 285 7.1E-27 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_14840 40620984973584ad4860354a0b9a89d6 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 117 5.0E-5 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_14840 40620984973584ad4860354a0b9a89d6 328 SUPERFAMILY SSF51735 125 298 4.42E-42 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_14840 40620984973584ad4860354a0b9a89d6 328 Gene3D G3DSA:3.90.180.10 1 325 6.9E-86 T 01-11-2018 DOE78_14840 40620984973584ad4860354a0b9a89d6 328 SUPERFAMILY SSF50129 1 154 2.04E-35 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_14840 40620984973584ad4860354a0b9a89d6 328 SMART SM00829 10 322 4.6E-11 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_09915 81b48985b764be1831add0db56e72a71 248 Gene3D G3DSA:1.10.287.860 164 223 3.1E-20 T 01-11-2018 DOE78_09915 81b48985b764be1831add0db56e72a71 248 Pfam PF04607 Region found in RelA / SpoT proteins 58 179 2.7E-38 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 DOE78_09915 81b48985b764be1831add0db56e72a71 248 Gene3D G3DSA:3.30.460.10 10 163 1.1E-51 T 01-11-2018 DOE78_09915 81b48985b764be1831add0db56e72a71 248 SUPERFAMILY SSF81301 18 210 1.96E-59 T 01-11-2018 DOE78_09915 81b48985b764be1831add0db56e72a71 248 SMART SM00954 58 181 3.5E-47 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 Pfam PF00664 ABC transporter transmembrane region 17 286 2.5E-55 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 Gene3D G3DSA:3.40.50.300 329 572 1.9E-94 T 01-11-2018 DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 Pfam PF00005 ABC transporter 349 498 2.2E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 Gene3D G3DSA:1.20.1560.10 1 315 3.7E-84 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 SMART SM00382 358 530 2.4E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 SUPERFAMILY SSF90123 3 319 9.03E-79 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_15010 be1f518382dd2d5e5f79afc426ab8f51 572 SUPERFAMILY SSF52540 322 569 1.39E-93 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 Gene3D G3DSA:1.10.10.2730 481 527 2.1E-22 T 01-11-2018 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 Gene3D G3DSA:1.10.10.60 427 480 1.7E-12 T 01-11-2018 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 Pfam PF00072 Response regulator receiver domain 17 125 4.3E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 SMART SM00448 14 129 3.4E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 SMART SM00342 443 526 1.2E-30 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 SUPERFAMILY SSF46689 480 529 4.93E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 Gene3D G3DSA:3.40.50.12740 14 220 8.1E-26 T 01-11-2018 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 510 526 7.0E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 495 510 7.0E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 SUPERFAMILY SSF52172 17 135 5.55E-26 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 Pfam PF12833 Helix-turn-helix domain 449 526 2.2E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02520 af5799e69053a7f6a7eabc1049a03817 533 SUPERFAMILY SSF46689 428 477 2.51E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_14545 9c0b9645b245fd3eae8f6d25fcc4479b 741 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 3 741 0.0 T 01-11-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DOE78_14545 9c0b9645b245fd3eae8f6d25fcc4479b 741 Pfam PF01228 Glycine radical 616 722 3.8E-44 T 01-11-2018 IPR001150 Glycine radical domain GO:0003824 DOE78_14545 9c0b9645b245fd3eae8f6d25fcc4479b 741 SUPERFAMILY SSF51998 1 740 6.41E-289 T 01-11-2018 DOE78_14545 9c0b9645b245fd3eae8f6d25fcc4479b 741 PIRSF PIRSF000379 1 741 0.0 T 01-11-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DOE78_14545 9c0b9645b245fd3eae8f6d25fcc4479b 741 Gene3D G3DSA:3.20.70.20 1 741 0.0 T 01-11-2018 DOE78_14545 9c0b9645b245fd3eae8f6d25fcc4479b 741 Pfam PF02901 Pyruvate formate lyase-like 16 600 3.0E-208 T 01-11-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 DOE78_14545 9c0b9645b245fd3eae8f6d25fcc4479b 741 ProSitePatterns PS00850 Glycine radical domain signature. 711 719 - T 01-11-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DOE78_05160 d0832087b530a5f371741dd095bb2832 249 Gene3D G3DSA:3.40.50.720 2 249 1.6E-80 T 01-11-2018 DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.5E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.5E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.5E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.5E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.5E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.5E-34 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.4E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.4E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.4E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05160 d0832087b530a5f371741dd095bb2832 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 3.8E-69 T 01-11-2018 DOE78_05160 d0832087b530a5f371741dd095bb2832 249 SUPERFAMILY SSF51735 3 247 2.39E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_01245 76b7b562017d12fd4548ef15bd6395a3 492 Pfam PF00005 ABC transporter 17 167 1.6E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_01245 76b7b562017d12fd4548ef15bd6395a3 492 SMART SM00382 26 215 3.4E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01245 76b7b562017d12fd4548ef15bd6395a3 492 SUPERFAMILY SSF52540 2 232 1.04E-64 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01245 76b7b562017d12fd4548ef15bd6395a3 492 Pfam PF01955 Adenosylcobinamide amidohydrolase 287 476 7.4E-50 T 01-11-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ DOE78_01245 76b7b562017d12fd4548ef15bd6395a3 492 Gene3D G3DSA:3.40.50.300 1 256 4.6E-73 T 01-11-2018 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Gene3D G3DSA:1.10.1790.10 191 289 1.5E-6 T 01-11-2018 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 SUPERFAMILY SSF55804 505 646 1.57E-28 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Gene3D G3DSA:1.10.10.10 2 67 1.1E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12735 0307460c79c82e60a52e584bef72857a 649 SUPERFAMILY SSF63520 303 401 1.83E-22 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 SUPERFAMILY SSF52794 408 495 1.88E-10 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 508 641 1.5E-23 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_12735 0307460c79c82e60a52e584bef72857a 649 SUPERFAMILY SSF46785 3 65 1.18E-5 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Pfam PF05043 Mga helix-turn-helix domain 113 177 1.2E-8 T 01-11-2018 IPR007737 Mga helix-turn-helix domain DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Pfam PF00874 PRD domain 201 286 2.1E-8 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Pfam PF00874 PRD domain 310 396 1.3E-20 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 SUPERFAMILY SSF63520 191 286 1.57E-11 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Pfam PF08279 HTH domain 7 64 4.6E-12 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Gene3D G3DSA:3.40.50.2300 409 496 9.2E-14 T 01-11-2018 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Gene3D G3DSA:1.10.1790.10 301 400 1.0E-21 T 01-11-2018 DOE78_12735 0307460c79c82e60a52e584bef72857a 649 Gene3D G3DSA:3.40.930.10 504 645 4.1E-21 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_23940 1476875f801c4d11cb7251045631e73b 61 Gene3D G3DSA:3.30.429.10 1 60 1.5E-27 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_23940 1476875f801c4d11cb7251045631e73b 61 Pfam PF01361 Tautomerase enzyme 2 60 3.3E-24 T 01-11-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 DOE78_23940 1476875f801c4d11cb7251045631e73b 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 4.8E-28 T 01-11-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 DOE78_23940 1476875f801c4d11cb7251045631e73b 61 SUPERFAMILY SSF55331 2 60 1.09E-19 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 Gene3D G3DSA:1.10.10.60 172 225 1.4E-16 T 01-11-2018 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 Gene3D G3DSA:1.10.10.60 119 171 5.2E-17 T 01-11-2018 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 Pfam PF12833 Helix-turn-helix domain 145 223 3.7E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 SMART SM00342 139 221 6.8E-28 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 SUPERFAMILY SSF46689 175 223 3.36E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 SUPERFAMILY SSF46689 122 173 1.52E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 205 221 1.0E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 190 205 1.0E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_20180 12f58e569d355c45b6cb1e44b0a29cf8 227 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 176 217 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Gene3D G3DSA:3.30.450.20 351 478 1.6E-34 T 01-11-2018 DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Pfam PF00990 Diguanylate cyclase, GGDEF domain 476 638 3.9E-45 T 01-11-2018 IPR000160 GGDEF domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 354 464 2.0E-19 T 01-11-2018 IPR000014 PAS domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 214 334 2.0E-17 T 01-11-2018 IPR000014 PAS domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SUPERFAMILY SSF55785 219 330 9.67E-20 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Gene3D G3DSA:3.30.450.20 204 350 1.5E-24 T 01-11-2018 DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 TIGRFAM TIGR00277 HDIG: HDIG domain 679 772 7.5E-9 T 01-11-2018 IPR006675 HDIG domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SMART SM00267 464 642 6.1E-63 T 01-11-2018 IPR000160 GGDEF domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SUPERFAMILY SSF55785 353 454 9.99E-28 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Gene3D G3DSA:1.10.3210.10 661 852 1.6E-62 T 01-11-2018 DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SMART SM00091 214 280 2.1E-6 T 01-11-2018 IPR000014 PAS domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SMART SM00091 341 409 0.037 T 01-11-2018 IPR000014 PAS domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Pfam PF00989 PAS fold 215 326 7.6E-16 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Pfam PF01966 HD domain 681 805 2.4E-22 T 01-11-2018 IPR006674 HD domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SUPERFAMILY SSF55073 480 644 1.02E-44 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SMART SM00471 676 814 6.7E-13 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SUPERFAMILY SSF109604 671 843 2.09E-39 T 01-11-2018 DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Pfam PF13426 PAS domain 355 456 2.2E-15 T 01-11-2018 IPR000014 PAS domain DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 Gene3D G3DSA:3.30.70.270 479 650 4.2E-50 T 01-11-2018 DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SMART SM00086 415 457 5.3E-8 T 01-11-2018 IPR001610 PAC motif DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 SMART SM00086 287 329 8.1E-5 T 01-11-2018 IPR001610 PAC motif DOE78_05435 7fbdad289f915e24719d23edf3d97cc2 858 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 474 640 3.5E-48 T 01-11-2018 IPR000160 GGDEF domain DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 SUPERFAMILY SSF50151 1 54 4.97E-18 T 01-11-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 Pfam PF03123 CAT RNA binding domain 1 56 9.3E-24 T 01-11-2018 IPR004341 CAT RNA-binding domain GO:0003723 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 SUPERFAMILY SSF63520 171 274 2.62E-28 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 SMART SM01061 1 59 2.9E-30 T 01-11-2018 IPR004341 CAT RNA-binding domain GO:0003723 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 Pfam PF00874 PRD domain 75 163 9.0E-25 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 Pfam PF00874 PRD domain 180 272 1.5E-19 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 Gene3D G3DSA:1.10.1790.10 168 276 3.3E-41 T 01-11-2018 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 Gene3D G3DSA:1.10.1790.10 64 167 8.8E-40 T 01-11-2018 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 SUPERFAMILY SSF63520 57 167 1.57E-32 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_22295 599d2e9c65689305956c7d423aa2f6cf 276 Gene3D G3DSA:2.30.24.10 1 55 1.0E-24 T 01-11-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 489 7.7E-41 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 PIRSF PIRSF000538 4 543 6.2E-66 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 5 544 3.0E-250 T 01-11-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 Gene3D G3DSA:3.30.420.40 283 553 2.7E-82 T 01-11-2018 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 278 5.4E-19 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 Hamap MF_00520 Ribulokinase [araB]. 4 550 54.552 T 01-11-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 Gene3D G3DSA:3.30.420.40 3 282 4.6E-73 T 01-11-2018 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 SUPERFAMILY SSF53067 5 283 1.15E-42 T 01-11-2018 DOE78_04345 3f4762fd32dfb408ad33be0608882254 566 SUPERFAMILY SSF53067 283 539 4.32E-54 T 01-11-2018 DOE78_23660 1a50ca8986cf2c2df9c72c988d7b4186 389 SUPERFAMILY SSF143243 240 386 1.44E-39 T 01-11-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23660 1a50ca8986cf2c2df9c72c988d7b4186 389 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 269 383 2.3E-37 T 01-11-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23660 1a50ca8986cf2c2df9c72c988d7b4186 389 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 320 375 1.0E-17 T 01-11-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23660 1a50ca8986cf2c2df9c72c988d7b4186 389 Gene3D G3DSA:3.30.460.80 212 366 1.5E-32 T 01-11-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_18570 09d2c697a8464206de82535daddec0db 401 Gene3D G3DSA:3.90.1260.10 63 352 2.6E-147 T 01-11-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18570 09d2c697a8464206de82535daddec0db 401 Gene3D G3DSA:3.40.50.620 6 171 2.6E-147 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_18570 09d2c697a8464206de82535daddec0db 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 396 54.97 T 01-11-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18570 09d2c697a8464206de82535daddec0db 401 SUPERFAMILY SSF69864 170 397 3.79E-92 T 01-11-2018 DOE78_18570 09d2c697a8464206de82535daddec0db 401 Pfam PF00764 Arginosuccinate synthase 7 390 2.8E-181 T 01-11-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18570 09d2c697a8464206de82535daddec0db 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 01-11-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18570 09d2c697a8464206de82535daddec0db 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 01-11-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18570 09d2c697a8464206de82535daddec0db 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 394 1.2E-177 T 01-11-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DOE78_18570 09d2c697a8464206de82535daddec0db 401 Gene3D G3DSA:1.20.5.470 362 397 1.2E-10 T 01-11-2018 DOE78_18570 09d2c697a8464206de82535daddec0db 401 SUPERFAMILY SSF52402 4 170 8.16E-47 T 01-11-2018 DOE78_12490 11bdde00630443d7c854a17dc4d76214 122 Gene3D G3DSA:1.10.3730.20 1 109 7.9E-36 T 01-11-2018 DOE78_12490 11bdde00630443d7c854a17dc4d76214 122 SUPERFAMILY SSF103481 6 105 2.62E-21 T 01-11-2018 DOE78_12490 11bdde00630443d7c854a17dc4d76214 122 Pfam PF00893 Small Multidrug Resistance protein 4 94 2.8E-25 T 01-11-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DOE78_07060 e2fd30588f6e523137fedfd503dc7661 273 Gene3D G3DSA:3.40.50.620 1 267 9.1E-86 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_07060 e2fd30588f6e523137fedfd503dc7661 273 SUPERFAMILY SSF52402 1 262 1.6E-67 T 01-11-2018 DOE78_07060 e2fd30588f6e523137fedfd503dc7661 273 PIRSF PIRSF000090 1 268 5.6E-82 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DOE78_07060 e2fd30588f6e523137fedfd503dc7661 273 Pfam PF01012 Electron transfer flavoprotein domain 23 214 7.7E-40 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_07060 e2fd30588f6e523137fedfd503dc7661 273 SMART SM00893 22 218 1.5E-46 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 Pfam PF13377 Periplasmic binding protein-like domain 188 349 2.3E-36 T 01-11-2018 DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 Gene3D G3DSA:3.40.50.2300 179 347 5.0E-69 T 01-11-2018 DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 SUPERFAMILY SSF47413 4 55 1.46E-15 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 Gene3D G3DSA:3.40.50.2300 88 341 5.0E-69 T 01-11-2018 DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 47 1.3E-14 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 SUPERFAMILY SSF53822 87 350 2.55E-70 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 Gene3D G3DSA:1.10.260.40 1 56 8.0E-20 T 01-11-2018 DOE78_11420 a902c329eadb6cae6aa98b8d147564af 354 SMART SM00354 4 70 1.7E-18 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Hamap MF_01973 Lon protease [lon]. 9 770 72.414 T 01-11-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 487 1.7E-23 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 SUPERFAMILY SSF88697 9 198 1.84E-43 T 01-11-2018 IPR015947 PUA-like superfamily DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 SMART SM00464 8 200 1.4E-65 T 01-11-2018 IPR003111 Lon, substrate-binding domain DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Gene3D G3DSA:1.10.8.60 490 582 5.0E-34 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 01-11-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 3.7E-99 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Gene3D G3DSA:3.30.230.10 591 775 2.2E-85 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 PIRSF PIRSF001174 1 772 0.0 T 01-11-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 198 4.9E-40 T 01-11-2018 IPR003111 Lon, substrate-binding domain DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Gene3D G3DSA:2.30.130.40 1 114 1.1E-27 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Gene3D G3DSA:1.20.58.1480 118 243 1.0E-42 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 TIGRFAM TIGR00763 lon: endopeptidase La 10 769 0.0 T 01-11-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 SMART SM00382 346 494 5.7E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 SUPERFAMILY SSF52540 310 586 1.68E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 7.9E-53 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 7.9E-53 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 7.9E-53 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 7.9E-53 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 7.9E-53 T 01-11-2018 DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 SUPERFAMILY SSF54211 593 768 5.31E-55 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_18075 2fffb702694df711eab959ed4fb7fad4 775 Gene3D G3DSA:3.40.50.300 311 489 2.0E-69 T 01-11-2018 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 SUPERFAMILY SSF52016 377 556 1.65E-60 T 01-11-2018 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 556 47.101 T 01-11-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 01-11-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 SUPERFAMILY SSF143975 4 376 2.09E-138 T 01-11-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 Pfam PF00920 Dehydratase family 34 552 2.1E-223 T 01-11-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 17 556 1.5E-258 T 01-11-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 Gene3D G3DSA:3.50.30.80 377 527 2.0E-53 T 01-11-2018 DOE78_21350 8f7ffdf619d99a4a762c7b4dcbb5b8d1 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 01-11-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DOE78_04475 0036ba1a7b34a957f01d02ea26c52a40 308 TIGRFAM TIGR00688 rarD: protein RarD 8 263 2.0E-71 T 01-11-2018 IPR004626 RarD protein GO:0005887 DOE78_04475 0036ba1a7b34a957f01d02ea26c52a40 308 SUPERFAMILY SSF103481 42 149 2.09E-11 T 01-11-2018 DOE78_04475 0036ba1a7b34a957f01d02ea26c52a40 308 SUPERFAMILY SSF103481 193 290 2.35E-8 T 01-11-2018 DOE78_04475 0036ba1a7b34a957f01d02ea26c52a40 308 Pfam PF00892 EamA-like transporter family 9 147 1.2E-13 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_04320 c5fafa6d74ae0db99a4a52726237e133 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 284 1.3E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_04320 c5fafa6d74ae0db99a4a52726237e133 296 SUPERFAMILY SSF160964 7 53 3.01E-6 T 01-11-2018 DOE78_04320 c5fafa6d74ae0db99a4a52726237e133 296 Gene3D G3DSA:1.10.3720.10 52 293 1.7E-70 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04320 c5fafa6d74ae0db99a4a52726237e133 296 SUPERFAMILY SSF161098 56 283 8.5E-59 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_01620 4cefead42a863e6e287cd1dcf3fca59f 314 SUPERFAMILY SSF161098 93 290 2.51E-19 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_01620 4cefead42a863e6e287cd1dcf3fca59f 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 309 4.6E-144 T 01-11-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 DOE78_01620 4cefead42a863e6e287cd1dcf3fca59f 314 Gene3D G3DSA:1.10.3720.10 81 310 1.9E-25 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_01620 4cefead42a863e6e287cd1dcf3fca59f 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 2.3E-42 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_03760 2fedd44fb3d09431df788ac0f785b0cf 55 Pfam PF08671 Anti-repressor SinI 7 33 1.4E-12 T 01-11-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 DOE78_03760 2fedd44fb3d09431df788ac0f785b0cf 55 Gene3D G3DSA:1.10.1660.10 8 53 1.2E-5 T 01-11-2018 DOE78_03760 2fedd44fb3d09431df788ac0f785b0cf 55 SUPERFAMILY SSF46955 10 51 2.93E-7 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_03760 2fedd44fb3d09431df788ac0f785b0cf 55 Pfam PF09278 MerR, DNA binding 12 50 1.3E-5 T 01-11-2018 IPR015358 Transcription regulator MerR, DNA binding DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 Pfam PF06725 3D domain 193 252 7.0E-19 T 01-11-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 SUPERFAMILY SSF54106 72 116 2.62E-11 T 01-11-2018 DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 SUPERFAMILY SSF50685 193 234 5.58E-7 T 01-11-2018 IPR036908 RlpA-like domain superfamily DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 SMART SM00257 73 116 3.7E-10 T 01-11-2018 IPR018392 LysM domain DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 SMART SM00257 26 69 6.7E-12 T 01-11-2018 IPR018392 LysM domain DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 Pfam PF01476 LysM domain 74 115 3.6E-13 T 01-11-2018 IPR018392 LysM domain DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 Pfam PF01476 LysM domain 27 68 2.5E-11 T 01-11-2018 IPR018392 LysM domain DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 SUPERFAMILY SSF54106 25 69 7.46E-10 T 01-11-2018 DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 Gene3D G3DSA:3.10.350.10 72 122 2.5E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_04415 59670853cf5fa559157e26b4719dd1ac 252 Gene3D G3DSA:3.10.350.10 23 71 8.7E-15 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_21505 da32f2793655fea60b02737588bfed64 244 SMART SM00448 5 117 8.1E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_21505 da32f2793655fea60b02737588bfed64 244 SMART SM00850 145 241 4.2E-24 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_21505 da32f2793655fea60b02737588bfed64 244 SUPERFAMILY SSF52172 3 128 2.99E-29 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_21505 da32f2793655fea60b02737588bfed64 244 Gene3D G3DSA:2.40.50.1020 136 236 2.0E-20 T 01-11-2018 DOE78_21505 da32f2793655fea60b02737588bfed64 244 Pfam PF00072 Response regulator receiver domain 7 117 2.4E-22 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_21505 da32f2793655fea60b02737588bfed64 244 Gene3D G3DSA:3.40.50.2300 1 135 1.1E-30 T 01-11-2018 DOE78_21505 da32f2793655fea60b02737588bfed64 244 Pfam PF04397 LytTr DNA-binding domain 148 240 1.5E-20 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_16055 812d35be5a56977c3f7bb80febb51911 364 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 359 60.85 T 01-11-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DOE78_16055 812d35be5a56977c3f7bb80febb51911 364 Gene3D G3DSA:3.90.1150.10 21 349 1.3E-117 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_16055 812d35be5a56977c3f7bb80febb51911 364 Pfam PF00155 Aminotransferase class I and II 30 353 4.9E-61 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_16055 812d35be5a56977c3f7bb80febb51911 364 Gene3D G3DSA:3.40.640.10 43 267 1.3E-117 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_16055 812d35be5a56977c3f7bb80febb51911 364 SUPERFAMILY SSF53383 1 359 1.79E-82 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_16055 812d35be5a56977c3f7bb80febb51911 364 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 357 2.2E-113 T 01-11-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 SMART SM00642 13 418 1.3E-162 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 Gene3D G3DSA:3.20.20.80 5 471 1.1E-199 T 01-11-2018 DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 SUPERFAMILY SSF51011 479 558 6.6E-19 T 01-11-2018 DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 Gene3D G3DSA:3.90.400.10 105 174 1.1E-199 T 01-11-2018 DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 Gene3D G3DSA:2.60.40.1180 480 560 1.9E-24 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 SUPERFAMILY SSF51445 3 474 3.4E-161 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 Pfam PF00128 Alpha amylase, catalytic domain 28 376 8.4E-129 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 Pfam PF16657 Maltogenic Amylase, C-terminal domain 479 553 6.9E-10 T 01-11-2018 IPR032091 Maltogenic Amylase, C-terminal DOE78_24400 53c1e4d764edcce2a462cc96b768543f 560 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 5 556 3.3E-270 T 01-11-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 DOE78_24405 dbd8adae23c43c4fc3241303e88e52f8 475 SUPERFAMILY SSF55604 8 81 4.05E-21 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_24405 dbd8adae23c43c4fc3241303e88e52f8 475 Pfam PF00367 phosphotransferase system, EIIB 9 42 1.4E-13 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_24405 dbd8adae23c43c4fc3241303e88e52f8 475 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 110 3.9E-19 T 01-11-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DOE78_24405 dbd8adae23c43c4fc3241303e88e52f8 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_24405 dbd8adae23c43c4fc3241303e88e52f8 475 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 463 2.5E-215 T 01-11-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 DOE78_24405 dbd8adae23c43c4fc3241303e88e52f8 475 Pfam PF02378 Phosphotransferase system, EIIC 111 407 1.5E-37 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_24405 dbd8adae23c43c4fc3241303e88e52f8 475 Gene3D G3DSA:3.30.1360.60 1 77 4.0E-25 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_01035 b3f434154429ded0bcb0f98118862ed2 303 SUPERFAMILY SSF47240 15 147 5.83E-27 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_01035 b3f434154429ded0bcb0f98118862ed2 303 SUPERFAMILY SSF47240 173 301 5.28E-14 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_01035 b3f434154429ded0bcb0f98118862ed2 303 Gene3D G3DSA:1.20.120.660 13 100 1.9E-7 T 01-11-2018 DOE78_01035 b3f434154429ded0bcb0f98118862ed2 303 Gene3D G3DSA:1.20.5.420 101 146 5.9E-8 T 01-11-2018 DOE78_01035 b3f434154429ded0bcb0f98118862ed2 303 Pfam PF02915 Rubrerythrin 99 221 3.8E-9 T 01-11-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 DOE78_01035 b3f434154429ded0bcb0f98118862ed2 303 Gene3D G3DSA:1.20.1260.10 173 303 8.1E-16 T 01-11-2018 IPR012347 Ferritin-like DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 Pfam PF01590 GAF domain 105 181 4.0E-7 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 Gene3D G3DSA:1.10.10.60 557 619 5.1E-12 T 01-11-2018 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 SUPERFAMILY SSF46689 519 619 7.17E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 Pfam PF00158 Sigma-54 interaction domain 314 480 1.0E-67 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 Pfam PF02954 Bacterial regulatory protein, Fis family 577 617 2.7E-12 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 SUPERFAMILY SSF52540 314 539 4.64E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 336 349 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 SMART SM00382 332 476 1.2E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 Gene3D G3DSA:1.10.8.60 484 556 1.9E-15 T 01-11-2018 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 SUPERFAMILY SSF55781 100 181 4.71E-6 T 01-11-2018 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 Gene3D G3DSA:3.30.450.40 17 203 9.2E-60 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 521 530 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 Gene3D G3DSA:3.40.50.300 301 483 3.9E-62 T 01-11-2018 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 600 619 1.3E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 583 600 1.3E-8 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_09085 7ba467cdfd509bda6be33a8c21ab2c1d 619 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 399 414 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 SMART SM00086 152 194 1.2E-5 T 01-11-2018 IPR001610 PAC motif DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 SMART SM00388 217 280 1.6E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 221 276 9.5E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 Gene3D G3DSA:3.30.565.10 279 433 3.3E-44 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 SMART SM00091 79 145 8.3E-6 T 01-11-2018 IPR000014 PAS domain DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 SUPERFAMILY SSF55785 84 195 3.49E-24 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 SUPERFAMILY SSF47384 204 277 4.12E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 84 200 7.1E-18 T 01-11-2018 IPR000014 PAS domain DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 Pfam PF08447 PAS fold 103 187 1.1E-13 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 SUPERFAMILY SSF55874 270 427 4.19E-41 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 Gene3D G3DSA:1.10.287.130 220 277 6.1E-15 T 01-11-2018 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 9.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 9.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 9.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 9.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 SMART SM00387 322 428 2.1E-33 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 Gene3D G3DSA:3.30.450.20 82 208 2.9E-24 T 01-11-2018 DOE78_14875 118291aa0077f704d3632082a2f80d5f 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 427 9.1E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 Gene3D G3DSA:3.40.50.720 147 287 2.1E-96 T 01-11-2018 DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 SUPERFAMILY SSF51735 138 306 1.97E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 SUPERFAMILY SSF50129 1 161 7.0E-47 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 Gene3D G3DSA:3.90.180.10 13 332 2.1E-96 T 01-11-2018 DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 Pfam PF00107 Zinc-binding dehydrogenase 175 302 2.1E-30 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 SMART SM00829 8 338 2.6E-6 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_19820 90f4dca2d2c3b7e1c90809d189aa4a5d 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 133 5.5E-28 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_22105 0c173f589d6685130f76d71b18071430 437 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 416 423 - T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 Gene3D G3DSA:1.10.10.60 376 435 6.6E-25 T 01-11-2018 DOE78_22105 0c173f589d6685130f76d71b18071430 437 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 435 8.4E-139 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 Pfam PF04552 Sigma-54, DNA binding domain 277 436 1.8E-65 T 01-11-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding DOE78_22105 0c173f589d6685130f76d71b18071430 437 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 51 6.6E-14 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 324 343 - T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 PRINTS PR00045 Sigma-54 factor signature 411 429 2.0E-25 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 PRINTS PR00045 Sigma-54 factor signature 149 166 2.0E-25 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 PRINTS PR00045 Sigma-54 factor signature 352 363 2.0E-25 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 PRINTS PR00045 Sigma-54 factor signature 336 348 2.0E-25 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_22105 0c173f589d6685130f76d71b18071430 437 Gene3D G3DSA:1.10.10.1330 86 194 1.1E-19 T 01-11-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DOE78_22105 0c173f589d6685130f76d71b18071430 437 Pfam PF04963 Sigma-54 factor, core binding domain 80 263 1.5E-48 T 01-11-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 DOE78_22105 0c173f589d6685130f76d71b18071430 437 PIRSF PIRSF000774 1 437 7.9E-137 T 01-11-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 PIRSF PIRSF005814 1 784 3.1E-275 T 01-11-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 Pfam PF01713 Smr domain 709 784 1.1E-19 T 01-11-2018 IPR002625 Smr domain DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 783 2.7E-277 T 01-11-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 SUPERFAMILY SSF160443 707 783 1.31E-9 T 01-11-2018 IPR036063 Smr domain superfamily DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 SUPERFAMILY SSF52540 293 513 4.96E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 Gene3D G3DSA:3.30.1370.110 696 784 7.7E-24 T 01-11-2018 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 Pfam PF00488 MutS domain V 331 512 3.0E-33 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 SUPERFAMILY SSF48334 18 287 3.92E-24 T 01-11-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 Gene3D G3DSA:3.40.50.300 293 598 2.3E-83 T 01-11-2018 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 SMART SM00463 706 784 7.5E-23 T 01-11-2018 IPR002625 Smr domain DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 SMART SM00534 328 513 4.0E-73 T 01-11-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 SMART SM00533 9 315 8.3E-29 T 01-11-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DOE78_18275 7f5500b0784f6d29b8489ccb7b32d1de 784 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 783 22.178 T 01-11-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 7.4E-15 T 01-11-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Gene3D G3DSA:3.40.120.10 256 339 9.4E-71 T 01-11-2018 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 4.7E-185 T 01-11-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Gene3D G3DSA:3.40.120.10 3 155 4.6E-57 T 01-11-2018 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 SUPERFAMILY SSF53738 158 256 4.32E-25 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 132 1.9E-41 T 01-11-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 SUPERFAMILY SSF53738 3 180 7.46E-45 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 44.952 T 01-11-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 3.5E-11 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 3.5E-11 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 3.5E-11 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 SUPERFAMILY SSF55957 357 446 6.02E-26 T 01-11-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Gene3D G3DSA:3.30.310.50 370 447 2.9E-28 T 01-11-2018 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 1.3E-16 T 01-11-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 SUPERFAMILY SSF53738 257 365 1.33E-34 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Gene3D G3DSA:3.40.120.10 174 362 9.4E-71 T 01-11-2018 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 01-11-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_01025 b271653d6ad0a0ff808f138b0e76005a 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 3.3E-36 T 01-11-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_22565 af44ba76aff9d5f2fc9a0223903f9539 219 PIRSF PIRSF001461 1 219 1.1E-80 T 01-11-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_22565 af44ba76aff9d5f2fc9a0223903f9539 219 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 208 1.5E-78 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_22565 af44ba76aff9d5f2fc9a0223903f9539 219 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_22565 af44ba76aff9d5f2fc9a0223903f9539 219 SUPERFAMILY SSF51366 1 208 3.83E-69 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_22565 af44ba76aff9d5f2fc9a0223903f9539 219 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 197 7.5E-76 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_22565 af44ba76aff9d5f2fc9a0223903f9539 219 Gene3D G3DSA:3.20.20.70 1 213 5.0E-84 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_22565 af44ba76aff9d5f2fc9a0223903f9539 219 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Gene3D G3DSA:3.40.50.300 275 413 3.2E-54 T 01-11-2018 DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 SMART SM00487 9 425 8.5E-27 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 658 45.129 T 01-11-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Gene3D G3DSA:3.40.50.300 414 595 2.1E-54 T 01-11-2018 DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 SUPERFAMILY SSF52540 33 594 1.36E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Pfam PF12344 Ultra-violet resistance protein B 551 593 2.3E-22 T 01-11-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 SUPERFAMILY SSF46600 611 657 1.7E-11 T 01-11-2018 IPR036876 UVR domain superfamily DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Pfam PF02151 UvrB/uvrC motif 623 657 3.2E-10 T 01-11-2018 IPR001943 UVR domain GO:0005515 DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 SUPERFAMILY SSF52540 3 414 1.28E-143 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Pfam PF00271 Helicase conserved C-terminal domain 438 544 2.4E-19 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Pfam PF04851 Type III restriction enzyme, res subunit 13 138 8.0E-12 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 656 0.0 T 01-11-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 SMART SM00490 459 545 1.4E-21 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_22250 60c8e5fad3c788fd65d793bb52348bcc 659 Gene3D G3DSA:3.40.50.300 1 243 6.7E-83 T 01-11-2018 DOE78_16325 15222956acefecab24ffcf270d60b624 548 Pfam PF05140 ResB-like family 444 521 3.0E-18 T 01-11-2018 IPR007816 ResB-like domain DOE78_16325 15222956acefecab24ffcf270d60b624 548 Pfam PF05140 ResB-like family 67 432 5.1E-72 T 01-11-2018 IPR007816 ResB-like domain DOE78_06140 e8f135382e88cdfcfbf4196befec0f5a 208 Pfam PF09335 SNARE associated Golgi protein 43 161 6.1E-22 T 01-11-2018 IPR032816 SNARE associated Golgi protein DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 Gene3D G3DSA:3.40.50.880 1 189 1.0E-62 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.9E-6 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.9E-6 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 Pfam PF00117 Glutamine amidotransferase class-I 4 185 5.9E-55 T 01-11-2018 IPR017926 Glutamine amidotransferase DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.8E-13 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 4.8E-13 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.8E-13 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.6E-35 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.6E-35 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.6E-35 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.6E-35 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.6E-35 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.6E-35 T 01-11-2018 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 185 2.7E-86 T 01-11-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_00435 9e4c40cefe456e0960cf5203ec0f8b56 199 SUPERFAMILY SSF52317 2 187 2.1E-57 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_23055 4153fc1b25b4ec0519d5be5710369794 408 Gene3D G3DSA:3.40.50.2000 215 394 1.0E-22 T 01-11-2018 DOE78_23055 4153fc1b25b4ec0519d5be5710369794 408 Pfam PF13439 Glycosyltransferase Family 4 15 205 1.5E-15 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_23055 4153fc1b25b4ec0519d5be5710369794 408 Pfam PF00534 Glycosyl transferases group 1 225 388 3.9E-16 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23055 4153fc1b25b4ec0519d5be5710369794 408 Gene3D G3DSA:3.40.50.2000 1 213 1.6E-18 T 01-11-2018 DOE78_23055 4153fc1b25b4ec0519d5be5710369794 408 SUPERFAMILY SSF53756 2 407 1.7E-45 T 01-11-2018 DOE78_16065 0094bf954a50b0a77d9f8df2c66d0358 362 Gene3D G3DSA:3.40.50.1970 2 171 2.3E-58 T 01-11-2018 DOE78_16065 0094bf954a50b0a77d9f8df2c66d0358 362 PIRSF PIRSF001455 3 361 1.7E-103 T 01-11-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DOE78_16065 0094bf954a50b0a77d9f8df2c66d0358 362 Pfam PF01761 3-dehydroquinate synthase 68 323 2.2E-94 T 01-11-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DOE78_16065 0094bf954a50b0a77d9f8df2c66d0358 362 Gene3D G3DSA:1.20.1090.10 172 360 4.5E-54 T 01-11-2018 DOE78_16065 0094bf954a50b0a77d9f8df2c66d0358 362 SUPERFAMILY SSF56796 5 357 9.29E-96 T 01-11-2018 DOE78_16065 0094bf954a50b0a77d9f8df2c66d0358 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 62.341 T 01-11-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DOE78_16065 0094bf954a50b0a77d9f8df2c66d0358 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 343 6.8E-112 T 01-11-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DOE78_00125 c77ca80f6d636070826bf045cb2f708f 166 Gene3D G3DSA:3.40.140.10 1 166 1.5E-61 T 01-11-2018 DOE78_00125 c77ca80f6d636070826bf045cb2f708f 166 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 148 44.97 T 01-11-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DOE78_00125 c77ca80f6d636070826bf045cb2f708f 166 SUPERFAMILY SSF53927 2 152 3.85E-52 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 DOE78_00125 c77ca80f6d636070826bf045cb2f708f 166 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DOE78_00125 c77ca80f6d636070826bf045cb2f708f 166 Pfam PF14437 MafB19-like deaminase 2 148 4.9E-42 T 01-11-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 Gene3D G3DSA:3.40.190.10 170 277 1.6E-46 T 01-11-2018 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 Pfam PF03466 LysR substrate binding domain 94 300 7.2E-36 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 SUPERFAMILY SSF53850 94 301 3.57E-34 T 01-11-2018 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 SUPERFAMILY SSF46785 7 93 4.32E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.4E-23 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.4E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.4E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.4E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 Gene3D G3DSA:3.40.190.10 96 295 1.6E-46 T 01-11-2018 DOE78_09140 cfde76b5609b562acf4c3148263aeafe 302 Gene3D G3DSA:1.10.10.10 7 95 2.0E-31 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22090 945377d91858800da481a716e3c094a8 335 Gene3D G3DSA:3.30.360.10 151 315 2.0E-161 T 01-11-2018 DOE78_22090 945377d91858800da481a716e3c094a8 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.2E-40 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.1E-73 T 01-11-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 Gene3D G3DSA:3.40.50.720 4 329 2.0E-161 T 01-11-2018 DOE78_22090 945377d91858800da481a716e3c094a8 335 SUPERFAMILY SSF51735 3 168 3.21E-68 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_22090 945377d91858800da481a716e3c094a8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 7.2E-43 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 7.2E-43 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 7.2E-43 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.2E-43 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.2E-43 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 SMART SM00846 3 152 5.7E-99 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 PIRSF PIRSF000149 1 334 9.4E-143 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.8E-140 T 01-11-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22090 945377d91858800da481a716e3c094a8 335 SUPERFAMILY SSF55347 152 314 2.35E-75 T 01-11-2018 DOE78_22090 945377d91858800da481a716e3c094a8 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 01-11-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Gene3D G3DSA:3.40.710.10 234 590 4.4E-103 T 01-11-2018 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Gene3D G3DSA:3.90.1310.10 60 207 2.4E-56 T 01-11-2018 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 SMART SM00740 655 711 0.0013 T 01-11-2018 IPR005543 PASTA domain DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 SMART SM00740 594 654 3.1E-8 T 01-11-2018 IPR005543 PASTA domain DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Gene3D G3DSA:3.30.70.2110 79 162 2.4E-56 T 01-11-2018 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Pfam PF03793 PASTA domain 598 652 1.4E-8 T 01-11-2018 IPR005543 PASTA domain DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Pfam PF03793 PASTA domain 657 708 3.1E-9 T 01-11-2018 IPR005543 PASTA domain DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 SUPERFAMILY SSF54184 598 653 1.7E-13 T 01-11-2018 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 579 3.7E-89 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 SUPERFAMILY SSF56601 191 611 1.11E-97 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 SUPERFAMILY SSF54184 656 710 4.32E-12 T 01-11-2018 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 SUPERFAMILY SSF56519 55 240 3.79E-44 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 214 1.3E-21 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_07690 0564c5bde7c8e0bb94b63056542604c4 745 Gene3D G3DSA:2.20.70.70 55 227 2.4E-56 T 01-11-2018 DOE78_06280 285148fccb37d27bda179d110d42cee4 513 PIRSF PIRSF001024 1 480 7.4E-90 T 01-11-2018 IPR013777 Alpha-amylase-like GO:0004556|GO:0005509|GO:0005975 DOE78_06280 285148fccb37d27bda179d110d42cee4 513 SUPERFAMILY SSF51445 28 395 1.66E-105 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_06280 285148fccb37d27bda179d110d42cee4 513 SUPERFAMILY SSF51011 395 473 3.46E-12 T 01-11-2018 DOE78_06280 285148fccb37d27bda179d110d42cee4 513 SMART SM00642 38 386 1.0E-99 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_06280 285148fccb37d27bda179d110d42cee4 513 Gene3D G3DSA:2.60.40.1180 391 485 3.5E-33 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_06280 285148fccb37d27bda179d110d42cee4 513 Pfam PF00128 Alpha amylase, catalytic domain 66 361 1.1E-74 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_06280 285148fccb37d27bda179d110d42cee4 513 Gene3D G3DSA:3.20.20.80 25 390 1.9E-150 T 01-11-2018 DOE78_06280 285148fccb37d27bda179d110d42cee4 513 Pfam PF16657 Maltogenic Amylase, C-terminal domain 395 464 2.2E-7 T 01-11-2018 IPR032091 Maltogenic Amylase, C-terminal DOE78_12765 fa5e5a6ed01364daaa6e6e96202853fb 279 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 277 5.3E-77 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_12765 fa5e5a6ed01364daaa6e6e96202853fb 279 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 277 1.3E-89 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_12765 fa5e5a6ed01364daaa6e6e96202853fb 279 PIRSF PIRSF001359 1 279 2.4E-87 T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_12765 fa5e5a6ed01364daaa6e6e96202853fb 279 Gene3D G3DSA:3.20.20.70 1 279 2.6E-92 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12765 fa5e5a6ed01364daaa6e6e96202853fb 279 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 129 140 - T 01-11-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DOE78_12765 fa5e5a6ed01364daaa6e6e96202853fb 279 SUPERFAMILY SSF51569 12 277 8.06E-87 T 01-11-2018 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 Pfam PF06574 FAD synthetase 18 167 4.2E-49 T 01-11-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 SMART SM00904 184 311 2.9E-58 T 01-11-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 84 3.1E-7 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 SUPERFAMILY SSF52374 19 177 6.76E-29 T 01-11-2018 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 Pfam PF01687 Riboflavin kinase 185 305 3.1E-35 T 01-11-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 22 310 3.5E-92 T 01-11-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 SUPERFAMILY SSF82114 174 312 5.01E-45 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 Gene3D G3DSA:2.40.30.30 189 308 1.2E-40 T 01-11-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DOE78_08410 8dac2117942816728c7cae7a1508f252 321 Gene3D G3DSA:3.40.50.620 5 188 2.1E-55 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_08410 8dac2117942816728c7cae7a1508f252 321 PIRSF PIRSF004491 2 318 1.6E-104 T 01-11-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DOE78_05965 f532d06cd403e37f88fe8635a6655d5a 101 Gene3D G3DSA:3.40.50.2300 1 101 2.3E-34 T 01-11-2018 DOE78_05965 f532d06cd403e37f88fe8635a6655d5a 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 2.0E-17 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_05965 f532d06cd403e37f88fe8635a6655d5a 101 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 1.5E-32 T 01-11-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 DOE78_05965 f532d06cd403e37f88fe8635a6655d5a 101 SUPERFAMILY SSF52794 1 97 3.4E-31 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 Gene3D G3DSA:3.10.430.100 60 148 4.1E-33 T 01-11-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.1E-51 T 01-11-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 2.7E-22 T 01-11-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 SUPERFAMILY SSF55653 58 147 1.7E-29 T 01-11-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 01-11-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 1.3E-30 T 01-11-2018 IPR020069 Ribosomal protein L9, C-terminal DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.911 T 01-11-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 SUPERFAMILY SSF55658 1 56 2.27E-17 T 01-11-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DOE78_24610 c48e01eba27a94f704898bdc2bc35cf1 149 Gene3D G3DSA:3.40.5.10 1 52 2.5E-24 T 01-11-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_10930 8c1076fec826deff015c675b9ff7317f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 3.3E-22 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_10930 8c1076fec826deff015c675b9ff7317f 101 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 94 2.2E-37 T 01-11-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 DOE78_10930 8c1076fec826deff015c675b9ff7317f 101 Gene3D G3DSA:3.40.50.2300 1 101 3.4E-37 T 01-11-2018 DOE78_10930 8c1076fec826deff015c675b9ff7317f 101 SUPERFAMILY SSF52794 2 99 1.54E-35 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_04240 6815052eedfbb6bb78435079ea02c327 315 Pfam PF01966 HD domain 132 253 3.7E-21 T 01-11-2018 IPR006674 HD domain DOE78_04240 6815052eedfbb6bb78435079ea02c327 315 SMART SM00471 125 262 5.4E-12 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_04240 6815052eedfbb6bb78435079ea02c327 315 SUPERFAMILY SSF109604 115 293 7.63E-42 T 01-11-2018 DOE78_04240 6815052eedfbb6bb78435079ea02c327 315 Gene3D G3DSA:1.10.3210.10 108 298 9.1E-72 T 01-11-2018 DOE78_24210 8dc8d46da564bac78b70537265105583 399 SMART SM00116 283 330 2.1 T 01-11-2018 IPR000644 CBS domain DOE78_24210 8dc8d46da564bac78b70537265105583 399 SMART SM00116 342 388 2.9 T 01-11-2018 IPR000644 CBS domain DOE78_24210 8dc8d46da564bac78b70537265105583 399 Pfam PF00571 CBS domain 335 385 1.2E-4 T 01-11-2018 IPR000644 CBS domain DOE78_24210 8dc8d46da564bac78b70537265105583 399 Pfam PF00571 CBS domain 293 328 1.3E-4 T 01-11-2018 IPR000644 CBS domain DOE78_24210 8dc8d46da564bac78b70537265105583 399 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_24210 8dc8d46da564bac78b70537265105583 399 SUPERFAMILY SSF52540 42 269 5.32E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24210 8dc8d46da564bac78b70537265105583 399 SUPERFAMILY SSF54631 273 386 1.64E-18 T 01-11-2018 DOE78_24210 8dc8d46da564bac78b70537265105583 399 Gene3D G3DSA:3.10.580.10 298 388 4.0E-8 T 01-11-2018 DOE78_24210 8dc8d46da564bac78b70537265105583 399 SMART SM00382 52 241 2.0E-19 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24210 8dc8d46da564bac78b70537265105583 399 Gene3D G3DSA:3.40.50.300 33 297 6.2E-79 T 01-11-2018 DOE78_24210 8dc8d46da564bac78b70537265105583 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 386 1.3E-143 T 01-11-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DOE78_24210 8dc8d46da564bac78b70537265105583 399 Pfam PF00005 ABC transporter 44 191 1.7E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_00725 ada93626fb1d6a687f2ccf08532f809c 208 SUPERFAMILY SSF50447 1 207 1.5E-79 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_00725 ada93626fb1d6a687f2ccf08532f809c 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 7.2E-86 T 01-11-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00725 ada93626fb1d6a687f2ccf08532f809c 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 38.831 T 01-11-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00725 ada93626fb1d6a687f2ccf08532f809c 208 Gene3D G3DSA:2.40.30.10 133 208 5.6E-17 T 01-11-2018 DOE78_00725 ada93626fb1d6a687f2ccf08532f809c 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 01-11-2018 IPR019926 Ribosomal protein L3, conserved site DOE78_00725 ada93626fb1d6a687f2ccf08532f809c 208 Pfam PF00297 Ribosomal protein L3 100 181 5.8E-17 T 01-11-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00725 ada93626fb1d6a687f2ccf08532f809c 208 Gene3D G3DSA:2.40.50.620 33 96 4.3E-15 T 01-11-2018 DOE78_07745 99f849d301104a2ba32e380c84218bf1 116 PIRSF PIRSF018579 1 113 3.2E-50 T 01-11-2018 IPR009709 Protein of unknown function DUF1290 DOE78_07745 99f849d301104a2ba32e380c84218bf1 116 Pfam PF06947 Protein of unknown function (DUF1290) 22 107 1.4E-37 T 01-11-2018 IPR009709 Protein of unknown function DUF1290 DOE78_21865 abc1d6c093c6a04801c47f1fbbf84de5 235 Pfam PF08713 DNA alkylation repair enzyme 6 193 1.8E-21 T 01-11-2018 IPR014825 DNA alkylation repair enzyme DOE78_21865 abc1d6c093c6a04801c47f1fbbf84de5 235 SUPERFAMILY SSF48371 1 235 7.77E-72 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Gene3D G3DSA:1.10.8.60 561 636 1.5E-23 T 01-11-2018 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 SUPERFAMILY SSF46689 602 695 4.93E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 413 426 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Pfam PF00158 Sigma-54 interaction domain 390 557 1.1E-69 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 SMART SM00091 128 194 3.3E-8 T 01-11-2018 IPR000014 PAS domain DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 SMART SM00091 246 314 26.0 T 01-11-2018 IPR000014 PAS domain DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Pfam PF13426 PAS domain 138 228 3.4E-9 T 01-11-2018 IPR000014 PAS domain DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Pfam PF13426 PAS domain 259 354 5.3E-4 T 01-11-2018 IPR000014 PAS domain DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 602 611 - T 01-11-2018 IPR025944 Sigma-54 interaction domain, conserved site DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Gene3D G3DSA:3.30.450.20 231 374 3.6E-12 T 01-11-2018 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Gene3D G3DSA:3.30.450.20 130 230 5.0E-15 T 01-11-2018 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 SUPERFAMILY SSF55785 128 224 5.06E-13 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 SUPERFAMILY SSF52540 389 632 8.75E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 SMART SM00382 409 553 2.8E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 SUPERFAMILY SSF55785 251 354 2.09E-6 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 194 2.9E-6 T 01-11-2018 IPR000014 PAS domain DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Gene3D G3DSA:3.40.50.300 375 560 2.4E-65 T 01-11-2018 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 476 491 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_21630 c27b8747850cbabe93cb7db6e60f1600 709 Gene3D G3DSA:1.10.10.60 637 698 3.3E-5 T 01-11-2018 DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 SUPERFAMILY SSF55874 323 473 5.24E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 2.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 2.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 2.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 2.2E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 Gene3D G3DSA:3.30.565.10 328 475 2.9E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 SMART SM00387 366 475 5.9E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 Gene3D G3DSA:1.10.287.130 245 325 9.7E-6 T 01-11-2018 DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 472 4.9E-15 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_11145 dfed5861db76e2c55d9e9eac0e2d0343 478 SUPERFAMILY SSF47384 244 311 5.69E-6 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 220 231 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 Pfam PF05199 GMC oxidoreductase 503 555 9.4E-9 T 01-11-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 SUPERFAMILY SSF51905 2 562 9.46E-47 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 Gene3D G3DSA:3.50.50.60 2 165 3.9E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 Gene3D G3DSA:3.50.50.60 476 564 2.3E-8 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 Gene3D G3DSA:3.50.50.60 233 347 6.6E-9 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 Pfam PF00732 GMC oxidoreductase 101 334 8.6E-11 T 01-11-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DOE78_24485 f2b0d7b6ec8869149ee59fe527dcfdc2 566 Pfam PF00890 FAD binding domain 5 36 1.5E-4 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 39.07 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 Pfam PF00557 Metallopeptidase family M24 11 239 1.8E-53 T 01-11-2018 IPR000994 Peptidase M24 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.1E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.1E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.1E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.1E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.5E-92 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 Gene3D G3DSA:3.90.230.10 1 250 1.9E-104 T 01-11-2018 DOE78_03430 46267093f8123131ca2887a066ee5c94 250 SUPERFAMILY SSF55920 1 247 1.83E-84 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 352 8.5E-8 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 284 311 9.6E-6 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 8.7E-8 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 Gene3D G3DSA:2.160.10.10 253 439 5.6E-55 T 01-11-2018 DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 SUPERFAMILY SSF53448 4 254 1.13E-67 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 42.036 T 01-11-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 SUPERFAMILY SSF51161 254 444 7.77E-49 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 Pfam PF00483 Nucleotidyl transferase 6 220 3.7E-26 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 452 3.7E-188 T 01-11-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DOE78_00305 191c1c192bc3d0b4974ccca4d6086046 458 Gene3D G3DSA:3.90.550.10 1 252 5.1E-80 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 Pfam PF00970 Oxidoreductase FAD-binding domain 163 267 3.9E-12 T 01-11-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 Pfam PF00175 Oxidoreductase NAD-binding domain 280 387 8.3E-15 T 01-11-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 Gene3D G3DSA:1.10.490.10 8 151 2.2E-58 T 01-11-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00406 Cytochrome B5 reductase signature 373 381 3.7E-5 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00406 Cytochrome B5 reductase signature 255 269 3.7E-5 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00406 Cytochrome B5 reductase signature 278 297 3.7E-5 T 01-11-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 Hamap MF_01252 Flavohemoprotein [hmp]. 7 411 57.847 T 01-11-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 Pfam PF00042 Globin 13 109 5.5E-12 T 01-11-2018 IPR000971 Globin GO:0020037 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 SUPERFAMILY SSF52343 269 408 1.83E-35 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 Gene3D G3DSA:2.40.30.10 157 268 5.1E-41 T 01-11-2018 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 6.3E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 219 6.3E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 6.3E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 191 201 6.3E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 297 6.3E-6 T 01-11-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 Gene3D G3DSA:3.40.50.80 270 411 1.2E-35 T 01-11-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 SUPERFAMILY SSF63380 156 267 1.7E-30 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel DOE78_09130 b20d74c61440d147a31306327e78b2f3 412 SUPERFAMILY SSF46458 8 149 3.99E-43 T 01-11-2018 IPR009050 Globin-like superfamily DOE78_13355 8e67b50df0519fdde908a6b4b37585f1 768 Gene3D G3DSA:3.40.50.300 598 767 2.1E-54 T 01-11-2018 DOE78_13355 8e67b50df0519fdde908a6b4b37585f1 768 SUPERFAMILY SSF52540 208 752 7.5E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13355 8e67b50df0519fdde908a6b4b37585f1 768 Pfam PF13538 UvrD-like helicase C-terminal domain 699 746 4.8E-10 T 01-11-2018 IPR027785 UvrD-like helicase C-terminal domain DOE78_13355 8e67b50df0519fdde908a6b4b37585f1 768 Pfam PF13245 AAA domain 220 575 3.2E-9 T 01-11-2018 DOE78_13355 8e67b50df0519fdde908a6b4b37585f1 768 Gene3D G3DSA:3.40.50.300 208 377 2.4E-10 T 01-11-2018 DOE78_13355 8e67b50df0519fdde908a6b4b37585f1 768 Gene3D G3DSA:3.40.50.300 501 596 6.5E-8 T 01-11-2018 DOE78_03410 3298719400069d1fd3e7cd0bf9267df2 304 Pfam PF04227 Indigoidine synthase A like protein 10 298 3.8E-136 T 01-11-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DOE78_03410 3298719400069d1fd3e7cd0bf9267df2 304 SUPERFAMILY SSF110581 3 300 1.96E-120 T 01-11-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DOE78_03410 3298719400069d1fd3e7cd0bf9267df2 304 Gene3D G3DSA:3.40.1790.10 1 304 5.6E-141 T 01-11-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DOE78_03410 3298719400069d1fd3e7cd0bf9267df2 304 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 9 302 43.831 T 01-11-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DOE78_03500 3bd055909d1473e4dad9b6279e38b734 372 Pfam PF13353 4Fe-4S single cluster domain 40 111 3.0E-5 T 01-11-2018 DOE78_03500 3bd055909d1473e4dad9b6279e38b734 372 SUPERFAMILY SSF102114 33 329 4.58E-25 T 01-11-2018 DOE78_03500 3bd055909d1473e4dad9b6279e38b734 372 Pfam PF04055 Radical SAM superfamily 36 184 1.9E-10 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_03500 3bd055909d1473e4dad9b6279e38b734 372 Gene3D G3DSA:3.20.20.70 23 291 1.0E-19 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_03500 3bd055909d1473e4dad9b6279e38b734 372 Pfam PF08756 YfkB-like domain 220 370 1.3E-76 T 01-11-2018 IPR014866 YfkB-like domain DOE78_03500 3bd055909d1473e4dad9b6279e38b734 372 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 9 370 1.4E-192 T 01-11-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 Pfam PF12833 Helix-turn-helix domain 199 277 3.0E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 SUPERFAMILY SSF46689 229 278 4.93E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 SMART SM00342 192 276 1.6E-32 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 Pfam PF02311 AraC-like ligand binding domain 29 157 6.1E-11 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 SUPERFAMILY SSF51215 44 163 4.97E-17 T 01-11-2018 IPR037923 Transcription regulator HTH-like DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 Gene3D G3DSA:2.60.120.280 12 158 3.4E-11 T 01-11-2018 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 2.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 2.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 Gene3D G3DSA:1.10.10.60 174 234 4.4E-16 T 01-11-2018 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 SUPERFAMILY SSF46689 178 227 4.35E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04300 317291e2e012cbcbc7c88b3f56c6e1d2 290 Gene3D G3DSA:1.10.10.2730 235 277 4.2E-17 T 01-11-2018 DOE78_21740 0c99b9ae90fcf9cee135d31f3e3b97b3 699 Gene3D G3DSA:1.50.10.10 264 635 7.8E-56 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_21740 0c99b9ae90fcf9cee135d31f3e3b97b3 699 Pfam PF06202 Amylo-alpha-1,6-glucosidase 269 625 4.1E-15 T 01-11-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 DOE78_21740 0c99b9ae90fcf9cee135d31f3e3b97b3 699 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 6 199 5.7E-53 T 01-11-2018 IPR032856 Putative glycogen debranching enzyme, N-terminal DOE78_21740 0c99b9ae90fcf9cee135d31f3e3b97b3 699 SUPERFAMILY SSF48208 215 689 5.1E-89 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_06565 02f902fc0c1e39736c2a74deea5a96de 572 SUPERFAMILY SSF53850 40 568 1.99E-115 T 01-11-2018 DOE78_06565 02f902fc0c1e39736c2a74deea5a96de 572 Gene3D G3DSA:3.40.190.10 63 556 2.6E-118 T 01-11-2018 DOE78_06565 02f902fc0c1e39736c2a74deea5a96de 572 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 481 5.3E-82 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_06565 02f902fc0c1e39736c2a74deea5a96de 572 Gene3D G3DSA:3.10.105.10 299 541 2.6E-118 T 01-11-2018 DOE78_06565 02f902fc0c1e39736c2a74deea5a96de 572 Gene3D G3DSA:3.90.76.10 77 207 2.6E-118 T 01-11-2018 DOE78_06565 02f902fc0c1e39736c2a74deea5a96de 572 PIRSF PIRSF002741 1 572 6.3E-98 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DOE78_12770 eb46caa5f6dc8fc222e71340451a5fb2 117 PIRSF PIRSF037181 1 117 2.0E-41 T 01-11-2018 IPR014958 DGC DOE78_12770 eb46caa5f6dc8fc222e71340451a5fb2 117 Pfam PF08859 DGC domain 8 110 1.8E-31 T 01-11-2018 IPR014958 DGC DOE78_15920 3b9bf3f487e5b58b16a74f3aeee780a4 157 Gene3D G3DSA:3.10.450.40 94 155 1.2E-19 T 01-11-2018 DOE78_15920 3b9bf3f487e5b58b16a74f3aeee780a4 157 Gene3D G3DSA:3.10.450.40 24 93 3.7E-20 T 01-11-2018 DOE78_15920 3b9bf3f487e5b58b16a74f3aeee780a4 157 SUPERFAMILY SSF54403 32 94 1.87E-17 T 01-11-2018 DOE78_15920 3b9bf3f487e5b58b16a74f3aeee780a4 157 SUPERFAMILY SSF54403 94 155 4.08E-17 T 01-11-2018 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 2.0E-18 T 01-11-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00458 Haem peroxidase superfamily signature 171 183 2.0E-18 T 01-11-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 2.0E-18 T 01-11-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00458 Haem peroxidase superfamily signature 153 170 2.0E-18 T 01-11-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00458 Haem peroxidase superfamily signature 93 107 2.0E-18 T 01-11-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 Pfam PF00141 Peroxidase 72 395 4.1E-46 T 01-11-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 Pfam PF00141 Peroxidase 402 700 8.8E-42 T 01-11-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 Gene3D G3DSA:1.10.420.10 581 702 5.0E-150 T 01-11-2018 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 7.6E-58 T 01-11-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 70 95 7.6E-58 T 01-11-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 7.6E-58 T 01-11-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 55 68 7.6E-58 T 01-11-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 29 51 7.6E-58 T 01-11-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 20 727 0.0 T 01-11-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 SUPERFAMILY SSF48113 435 726 1.62E-111 T 01-11-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 Gene3D G3DSA:1.10.420.20 194 397 7.0E-220 T 01-11-2018 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 Hamap MF_01961 Catalase-peroxidase [katG]. 7 727 42.039 T 01-11-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 Gene3D G3DSA:1.10.520.10 431 726 5.0E-150 T 01-11-2018 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 SUPERFAMILY SSF48113 23 429 1.77E-155 T 01-11-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 Gene3D G3DSA:1.10.520.10 24 430 7.0E-220 T 01-11-2018 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 ProSitePatterns PS00436 Peroxidases active site signature. 93 104 - T 01-11-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 DOE78_02345 742fbd458b01ef4631c2e84604f1ef50 739 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 257 267 - T 01-11-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 SUPERFAMILY SSF46689 388 439 1.16E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 SUPERFAMILY SSF52172 5 135 1.85E-31 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 SMART SM00342 405 487 1.3E-28 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 SMART SM00448 2 116 4.3E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 Gene3D G3DSA:1.10.10.60 438 489 5.1E-15 T 01-11-2018 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 Pfam PF12833 Helix-turn-helix domain 412 487 6.3E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 442 483 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 Gene3D G3DSA:3.40.50.12740 3 164 3.1E-33 T 01-11-2018 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 Gene3D G3DSA:1.10.10.60 386 437 2.5E-17 T 01-11-2018 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 Pfam PF00072 Response regulator receiver domain 5 116 1.9E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02570 17e14b1d0338125de4be9741db5c419f 490 SUPERFAMILY SSF46689 441 488 1.43E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_17815 181e90613b847072d8a4b1ee23052689 520 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 357 496 2.2E-16 T 01-11-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DOE78_17815 181e90613b847072d8a4b1ee23052689 520 Pfam PF01943 Polysaccharide biosynthesis protein 4 305 7.0E-55 T 01-11-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DOE78_17815 181e90613b847072d8a4b1ee23052689 520 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 4 491 2.9E-174 T 01-11-2018 IPR014249 Sporulation stage V protein B DOE78_17815 181e90613b847072d8a4b1ee23052689 520 PIRSF PIRSF038958 1 515 9.4E-172 T 01-11-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DOE78_07980 dd384eccd73f297f865290b1d44ca621 558 Pfam PF13684 Dihydroxyacetone kinase family 240 558 1.3E-125 T 01-11-2018 IPR033470 Uncharacterised protein, DhaK domain DOE78_07980 dd384eccd73f297f865290b1d44ca621 558 Gene3D G3DSA:1.25.40.340 4 179 1.0E-9 T 01-11-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DOE78_07980 dd384eccd73f297f865290b1d44ca621 558 SUPERFAMILY SSF101473 3 202 1.31E-44 T 01-11-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DOE78_07980 dd384eccd73f297f865290b1d44ca621 558 Pfam PF02734 DAK2 domain 36 200 8.4E-41 T 01-11-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DOE78_07980 dd384eccd73f297f865290b1d44ca621 558 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 558 3.3E-213 T 01-11-2018 IPR019986 DAK2 domain-containing protein YloV DOE78_07980 dd384eccd73f297f865290b1d44ca621 558 SMART SM01121 240 558 1.1E-187 T 01-11-2018 IPR033470 Uncharacterised protein, DhaK domain DOE78_07980 dd384eccd73f297f865290b1d44ca621 558 SMART SM01120 36 201 3.0E-70 T 01-11-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DOE78_16940 a831fad176dc5db449b59749ed511c8b 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 1.4E-56 T 01-11-2018 IPR014198 Stage III sporulation protein AB DOE78_16940 a831fad176dc5db449b59749ed511c8b 171 PIRSF PIRSF021435 1 171 3.9E-69 T 01-11-2018 IPR014198 Stage III sporulation protein AB DOE78_16940 a831fad176dc5db449b59749ed511c8b 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 2.3E-68 T 01-11-2018 IPR014198 Stage III sporulation protein AB DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 SUPERFAMILY SSF101801 346 427 8.11E-26 T 01-11-2018 IPR036429 SpoA-like superfamily DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 PRINTS PR00956 Flagellar motor switch protein FliN signature 382 395 5.2E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 PRINTS PR00956 Flagellar motor switch protein FliN signature 395 410 5.2E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 PRINTS PR00956 Flagellar motor switch protein FliN signature 366 382 5.2E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 PRINTS PR00956 Flagellar motor switch protein FliN signature 349 365 5.2E-30 T 01-11-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 SUPERFAMILY SSF103039 37 227 7.59E-50 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 Gene3D G3DSA:3.40.1550.10 37 231 1.9E-53 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 Gene3D G3DSA:2.30.330.10 338 429 4.5E-37 T 01-11-2018 IPR036429 SpoA-like superfamily DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 349 419 1.6E-25 T 01-11-2018 IPR001543 Surface presentation of antigen (SpoA) DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 Pfam PF04509 CheC-like family 42 78 2.2E-16 T 01-11-2018 IPR007597 CheC-like protein GO:0016787 DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 Pfam PF04509 CheC-like family 139 174 3.7E-14 T 01-11-2018 IPR007597 CheC-like protein GO:0016787 DOE78_08230 bc2dad88ce202b07ae341762c282c526 429 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 346 421 2.8E-32 T 01-11-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DOE78_17610 7f3606235a44d570fb7b93868243ff08 179 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 173 1.4E-38 T 01-11-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 DOE78_17610 7f3606235a44d570fb7b93868243ff08 179 Gene3D G3DSA:1.20.120.1760 4 173 7.6E-12 T 01-11-2018 DOE78_17610 7f3606235a44d570fb7b93868243ff08 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DOE78_17610 7f3606235a44d570fb7b93868243ff08 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 81 4.6E-13 T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DOE78_11790 5024670b175636592021e9e024ce8c24 808 SUPERFAMILY SSF54665 4 151 2.88E-44 T 01-11-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DOE78_11790 5024670b175636592021e9e024ce8c24 808 SUPERFAMILY SSF56003 122 802 9.16E-178 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DOE78_11790 5024670b175636592021e9e024ce8c24 808 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 129 9.3E-29 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DOE78_11790 5024670b175636592021e9e024ce8c24 808 Gene3D G3DSA:3.30.365.10 18 283 7.4E-108 T 01-11-2018 DOE78_11790 5024670b175636592021e9e024ce8c24 808 SMART SM01008 19 130 1.4E-46 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DOE78_11790 5024670b175636592021e9e024ce8c24 808 Gene3D G3DSA:3.30.365.10 131 360 7.4E-108 T 01-11-2018 DOE78_11790 5024670b175636592021e9e024ce8c24 808 Gene3D G3DSA:3.30.365.10 368 774 1.9E-130 T 01-11-2018 DOE78_11790 5024670b175636592021e9e024ce8c24 808 Gene3D G3DSA:3.90.1170.50 35 130 7.4E-108 T 01-11-2018 DOE78_11790 5024670b175636592021e9e024ce8c24 808 Gene3D G3DSA:3.30.365.10 455 649 1.9E-130 T 01-11-2018 DOE78_11790 5024670b175636592021e9e024ce8c24 808 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 147 734 9.3E-157 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.1E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.1E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 SUPERFAMILY SSF64288 62 241 2.98E-50 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 Gene3D G3DSA:1.10.10.10 10 77 4.6E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 SUPERFAMILY SSF46785 7 78 4.06E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 Gene3D G3DSA:3.40.1410.10 78 242 8.8E-46 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 Pfam PF07702 UTRA domain 97 232 2.1E-37 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 SMART SM00866 96 235 2.4E-35 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 SMART SM00345 15 74 3.8E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_20650 ee3fee8a2e07660f356694431456fa18 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 2.5E-21 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_06805 aa70621afdf415c546f4242f76aee1b5 143 Gene3D G3DSA:1.10.10.10 4 83 1.7E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_06805 aa70621afdf415c546f4242f76aee1b5 143 SUPERFAMILY SSF46785 9 135 3.78E-32 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_06805 aa70621afdf415c546f4242f76aee1b5 143 Gene3D G3DSA:3.30.1490.190 86 141 1.7E-18 T 01-11-2018 DOE78_06805 aa70621afdf415c546f4242f76aee1b5 143 Pfam PF01475 Ferric uptake regulator family 16 130 9.3E-28 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 SUPERFAMILY SSF46894 127 225 1.3E-30 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 Pfam PF00072 Response regulator receiver domain 3 113 9.4E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 SMART SM00448 1 112 1.9E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 SUPERFAMILY SSF52172 1 118 4.7E-38 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 Gene3D G3DSA:3.40.50.2300 1 126 6.3E-35 T 01-11-2018 DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 Gene3D G3DSA:1.10.10.10 130 233 6.3E-36 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 SMART SM00862 150 225 1.6E-30 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_05680 66ace7b8fade45c316d61333ff38b513 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 225 2.4E-29 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Gene3D G3DSA:1.10.10.650 4 115 2.9E-37 T 01-11-2018 IPR023319 Tex-like protein, HTH domain superfamily DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 SMART SM00732 324 422 3.2E-39 T 01-11-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Gene3D G3DSA:2.40.50.140 636 722 1.2E-24 T 01-11-2018 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 SMART SM00316 650 721 7.4E-23 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 SUPERFAMILY SSF53098 320 467 1.06E-50 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 SUPERFAMILY SSF50249 637 721 3.13E-23 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Pfam PF16921 Tex protein YqgF-like domain 324 449 7.6E-58 T 01-11-2018 IPR032639 Tex protein, YqgF-like domain DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 SUPERFAMILY SSF158832 10 319 1.44E-113 T 01-11-2018 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Gene3D G3DSA:3.30.420.140 323 449 6.7E-155 T 01-11-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Pfam PF09371 Tex-like protein N-terminal domain 15 199 8.6E-70 T 01-11-2018 IPR018974 Tex-like protein, N-terminal DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 SUPERFAMILY SSF47781 558 633 1.11E-15 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Gene3D G3DSA:1.10.3500.10 118 496 6.7E-155 T 01-11-2018 IPR023323 Tex-like domain superfamily DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Pfam PF12836 Helix-hairpin-helix motif 489 553 8.7E-25 T 01-11-2018 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Gene3D G3DSA:1.10.150.310 497 631 2.5E-45 T 01-11-2018 DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 SUPERFAMILY SSF47781 468 554 2.56E-25 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_01385 53b6a7ad0a5fe21bba741fec60e7642b 723 Pfam PF00575 S1 RNA binding domain 650 720 8.0E-17 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_01845 baab83432282b63ebe5a4c09ed9c5a50 84 SUPERFAMILY SSF82697 1 80 1.92E-29 T 01-11-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01845 baab83432282b63ebe5a4c09ed9c5a50 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 7.4E-33 T 01-11-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01845 baab83432282b63ebe5a4c09ed9c5a50 84 Gene3D G3DSA:3.30.1280.10 1 84 1.3E-35 T 01-11-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01845 baab83432282b63ebe5a4c09ed9c5a50 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.756 T 01-11-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01845 baab83432282b63ebe5a4c09ed9c5a50 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 8.0E-18 T 01-11-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01845 baab83432282b63ebe5a4c09ed9c5a50 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 1.5E-31 T 01-11-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 3 434 1.2E-219 T 01-11-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 SUPERFAMILY SSF51658 3 436 6.77E-175 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 Gene3D G3DSA:3.20.20.150 2 441 1.8E-188 T 01-11-2018 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 90 112 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 269 296 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 205 224 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 331 342 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 154 173 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 298 309 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 227 251 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 131 151 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 PRINTS PR00688 Xylose isomerase signature 178 199 4.0E-98 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 Hamap MF_00455 Xylose isomerase [xylA]. 10 434 55.102 T 01-11-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DOE78_20125 365a28a302d4ebb69911d0b5ab57d328 443 Pfam PF01261 Xylose isomerase-like TIM barrel 141 284 1.6E-7 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 01-11-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 01-11-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 Gene3D G3DSA:3.90.1170.10 1 143 3.0E-56 T 01-11-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.1E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.1E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.1E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.1E-40 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.1E-63 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 6.7E-54 T 01-11-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.574 T 01-11-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00760 f5e0edf3d0393ffc52f848944f0092a7 144 SUPERFAMILY SSF54686 1 137 1.44E-60 T 01-11-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_15285 508368fd9e6b219b26609a94a8de7d2b 158 SUPERFAMILY SSF49764 92 154 3.14E-8 T 01-11-2018 IPR008978 HSP20-like chaperone DOE78_10795 830fc09f98354ca85567afe54d151f85 187 Pfam PF04892 VanZ like family 50 171 2.3E-23 T 01-11-2018 IPR006976 VanZ-like DOE78_00255 ecd6de4e7f2bd8d9823fb7d71a6bada2 186 Gene3D G3DSA:3.40.1360.20 1 134 1.4E-27 T 01-11-2018 DOE78_00255 ecd6de4e7f2bd8d9823fb7d71a6bada2 186 SUPERFAMILY SSF110455 1 113 2.88E-37 T 01-11-2018 DOE78_00255 ecd6de4e7f2bd8d9823fb7d71a6bada2 186 Pfam PF13662 Toprim domain 5 71 3.0E-9 T 01-11-2018 IPR006171 TOPRIM domain DOE78_00255 ecd6de4e7f2bd8d9823fb7d71a6bada2 186 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 178 32.977 T 01-11-2018 IPR004466 Ribonuclease M5 GO:0043822 DOE78_00255 ecd6de4e7f2bd8d9823fb7d71a6bada2 186 Pfam PF13331 Domain of unknown function (DUF4093) 93 176 3.5E-29 T 01-11-2018 IPR025156 Ribonuclease M5, C-terminal domain DOE78_00255 ecd6de4e7f2bd8d9823fb7d71a6bada2 186 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 176 4.3E-64 T 01-11-2018 IPR004466 Ribonuclease M5 GO:0043822 DOE78_00255 ecd6de4e7f2bd8d9823fb7d71a6bada2 186 SMART SM00493 4 77 1.6E-9 T 01-11-2018 IPR006171 TOPRIM domain DOE78_10855 7e5872001aa68dc13cd8c77a9bb56da7 168 Pfam PF13079 Protein of unknown function (DUF3916) 17 166 1.0E-51 T 01-11-2018 IPR025075 Protein of unknown function DUF3916 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 2.9E-87 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 SUPERFAMILY SSF53067 254 493 1.84E-87 T 01-11-2018 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 5.4E-65 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 Gene3D G3DSA:3.30.420.40 1 252 4.9E-111 T 01-11-2018 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 60.066 T 01-11-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 493 1.1E-225 T 01-11-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 PIRSF PIRSF000538 2 495 2.0E-182 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 SUPERFAMILY SSF53067 3 254 2.05E-95 T 01-11-2018 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 Gene3D G3DSA:3.30.420.40 253 496 1.3E-91 T 01-11-2018 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_15185 d0f59a45e129122a8d3156aac5cd36f6 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 01-11-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_17330 88bd38adbda64e31b35c4e4c38f3befb 121 PIRSF PIRSF000025 1 121 2.0E-34 T 01-11-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 DOE78_17330 88bd38adbda64e31b35c4e4c38f3befb 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 52 117 7.6E-11 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_17330 88bd38adbda64e31b35c4e4c38f3befb 121 SUPERFAMILY SSF46626 7 120 7.98E-16 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_17330 88bd38adbda64e31b35c4e4c38f3befb 121 Gene3D G3DSA:1.10.760.10 51 121 1.2E-23 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 Gene3D G3DSA:1.10.10.10 3 74 2.9E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 Pfam PF07702 UTRA domain 96 232 1.2E-29 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 3.0E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 Gene3D G3DSA:3.40.1410.10 77 239 6.4E-32 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 SUPERFAMILY SSF64288 62 239 1.4E-38 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 SMART SM00345 14 73 1.3E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 SUPERFAMILY SSF46785 5 84 1.09E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.3E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.3E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_08485 10c4e385c64621b4a4b2cd89f7a1fe96 241 SMART SM00866 95 233 7.5E-27 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_13405 c88270227e66d9b07367c9d6895655de 295 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 257 2.0E-51 T 01-11-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DOE78_13405 c88270227e66d9b07367c9d6895655de 295 Gene3D G3DSA:3.40.190.10 40 261 6.7E-54 T 01-11-2018 DOE78_13405 c88270227e66d9b07367c9d6895655de 295 Gene3D G3DSA:3.40.190.10 121 230 6.7E-54 T 01-11-2018 DOE78_13405 c88270227e66d9b07367c9d6895655de 295 SUPERFAMILY SSF53850 60 244 2.28E-32 T 01-11-2018 DOE78_13405 c88270227e66d9b07367c9d6895655de 295 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 37 295 9.7E-101 T 01-11-2018 IPR030836 Putative ABC transporter periplasmic binding protein PhnD-like DOE78_13405 c88270227e66d9b07367c9d6895655de 295 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 40 281 2.7E-59 T 01-11-2018 DOE78_03000 656677b930d4de87963fdb4260e97e6f 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 7.7E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03000 656677b930d4de87963fdb4260e97e6f 125 SMART SM00345 18 77 4.7E-4 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03000 656677b930d4de87963fdb4260e97e6f 125 Gene3D G3DSA:1.10.10.10 11 125 9.7E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_03000 656677b930d4de87963fdb4260e97e6f 125 SUPERFAMILY SSF46785 8 81 4.93E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12130 cfad8ac8a5a01d432d9edfe876e98949 578 Gene3D G3DSA:3.40.50.1820 17 541 3.1E-93 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_12130 cfad8ac8a5a01d432d9edfe876e98949 578 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 215 230 - T 01-11-2018 IPR019826 Carboxylesterase type B, active site DOE78_12130 cfad8ac8a5a01d432d9edfe876e98949 578 Pfam PF00135 Carboxylesterase family 49 415 1.3E-66 T 01-11-2018 IPR002018 Carboxylesterase, type B DOE78_12130 cfad8ac8a5a01d432d9edfe876e98949 578 SUPERFAMILY SSF53474 46 521 2.52E-82 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 SUPERFAMILY SSF52540 1 240 2.8E-83 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 Pfam PF09383 NIL domain 265 337 2.2E-21 T 01-11-2018 IPR018449 NIL domain DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 SMART SM00930 263 338 2.1E-30 T 01-11-2018 IPR018449 NIL domain DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 Gene3D G3DSA:3.40.50.300 1 243 5.7E-75 T 01-11-2018 DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 Gene3D G3DSA:3.30.70.260 244 341 1.4E-32 T 01-11-2018 DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 Pfam PF00005 ABC transporter 21 169 2.6E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 SMART SM00382 30 218 5.6E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_21160 6b886312886ac4175b8b9ed14a55b491 341 SUPERFAMILY SSF55021 249 340 8.36E-26 T 01-11-2018 DOE78_10775 5f136b9de4c5e02cdc9b0d24d7350ed5 365 Pfam PF00924 Mechanosensitive ion channel 139 339 1.3E-64 T 01-11-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DOE78_10775 5f136b9de4c5e02cdc9b0d24d7350ed5 365 SUPERFAMILY SSF50182 181 246 5.89E-19 T 01-11-2018 IPR010920 LSM domain superfamily DOE78_10775 5f136b9de4c5e02cdc9b0d24d7350ed5 365 SUPERFAMILY SSF82689 247 350 3.66E-20 T 01-11-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DOE78_10775 5f136b9de4c5e02cdc9b0d24d7350ed5 365 SUPERFAMILY SSF82861 97 179 3.27E-9 T 01-11-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DOE78_10775 5f136b9de4c5e02cdc9b0d24d7350ed5 365 Gene3D G3DSA:2.30.30.60 196 245 3.7E-14 T 01-11-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE78_10775 5f136b9de4c5e02cdc9b0d24d7350ed5 365 Gene3D G3DSA:3.30.70.100 247 344 6.3E-19 T 01-11-2018 DOE78_03260 a2b8a33d7d7a41dfdd3b87d6ecd26684 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 220 4.0E-14 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_03260 a2b8a33d7d7a41dfdd3b87d6ecd26684 310 Gene3D G3DSA:3.40.50.720 1 310 7.3E-30 T 01-11-2018 DOE78_03260 a2b8a33d7d7a41dfdd3b87d6ecd26684 310 SUPERFAMILY SSF51735 1 296 3.3E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_22270 e1832504a22cc0be0b9e36f245e0dea3 132 Pfam PF07681 DoxX 5 93 2.6E-21 T 01-11-2018 IPR032808 DoxX family DOE78_17755 77a70ad8b09a46b4bae6b6d31be2bcec 255 Gene3D G3DSA:3.40.50.720 1 255 6.7E-81 T 01-11-2018 DOE78_17755 77a70ad8b09a46b4bae6b6d31be2bcec 255 Pfam PF00899 ThiF family 6 158 8.6E-39 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DOE78_17755 77a70ad8b09a46b4bae6b6d31be2bcec 255 SUPERFAMILY SSF69572 4 245 1.24E-62 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DOE78_06110 0e1331fa5f615e857e8f36ccc35aee28 101 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 96 6.2E-22 T 01-11-2018 IPR008407 Branched-chain amino acid transport, AzlD DOE78_02280 e52ddcf8931e907e9272b51aa8d8ea51 101 SUPERFAMILY SSF46785 9 93 2.39E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_02280 e52ddcf8931e907e9272b51aa8d8ea51 101 Pfam PF01022 Bacterial regulatory protein, arsR family 21 67 2.3E-13 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_02280 e52ddcf8931e907e9272b51aa8d8ea51 101 Gene3D G3DSA:1.10.10.10 2 97 2.7E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02280 e52ddcf8931e907e9272b51aa8d8ea51 101 SMART SM00418 14 90 3.2E-18 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_02280 e52ddcf8931e907e9272b51aa8d8ea51 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 2.2E-12 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_02280 e52ddcf8931e907e9272b51aa8d8ea51 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 2.2E-12 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_02280 e52ddcf8931e907e9272b51aa8d8ea51 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 2.2E-12 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_02140 6a31f23b4455c562c778db961e8b7fe0 244 PIRSF PIRSF039085 1 244 1.2E-115 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DOE78_02140 6a31f23b4455c562c778db961e8b7fe0 244 Gene3D G3DSA:3.40.50.300 4 243 5.5E-77 T 01-11-2018 DOE78_02140 6a31f23b4455c562c778db961e8b7fe0 244 SUPERFAMILY SSF52540 4 238 8.16E-80 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02140 6a31f23b4455c562c778db961e8b7fe0 244 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_02140 6a31f23b4455c562c778db961e8b7fe0 244 SMART SM00382 29 216 4.1E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_02140 6a31f23b4455c562c778db961e8b7fe0 244 Pfam PF00005 ABC transporter 20 168 5.3E-36 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_07955 f4c81c6bee9fef5b32b02267b113ae90 214 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_07955 f4c81c6bee9fef5b32b02267b113ae90 214 PIRSF PIRSF001461 1 214 1.9E-102 T 01-11-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_07955 f4c81c6bee9fef5b32b02267b113ae90 214 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 5.6E-92 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_07955 f4c81c6bee9fef5b32b02267b113ae90 214 Gene3D G3DSA:3.20.20.70 1 214 4.3E-96 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_07955 f4c81c6bee9fef5b32b02267b113ae90 214 SUPERFAMILY SSF51366 1 213 3.84E-81 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_07955 f4c81c6bee9fef5b32b02267b113ae90 214 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 1.1E-98 T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_07955 f4c81c6bee9fef5b32b02267b113ae90 214 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 01-11-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DOE78_22170 52784a6d57f99cf93bc33e20df180ae3 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 240 36.58 T 01-11-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DOE78_22170 52784a6d57f99cf93bc33e20df180ae3 242 Gene3D G3DSA:3.20.20.70 1 242 9.0E-88 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_22170 52784a6d57f99cf93bc33e20df180ae3 242 SUPERFAMILY SSF51366 4 239 1.18E-70 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_22170 52784a6d57f99cf93bc33e20df180ae3 242 Pfam PF00977 Histidine biosynthesis protein 5 232 9.5E-76 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 DOE78_22170 52784a6d57f99cf93bc33e20df180ae3 242 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 236 1.8E-83 T 01-11-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DOE78_15215 27ddc5545882ea6e639e6d0cf92abf7c 415 PIRSF PIRSF003180 1 409 7.6E-107 T 01-11-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing DOE78_15215 27ddc5545882ea6e639e6d0cf92abf7c 415 Gene3D G3DSA:1.10.3210.10 197 372 2.1E-18 T 01-11-2018 DOE78_15215 27ddc5545882ea6e639e6d0cf92abf7c 415 Pfam PF00563 EAL domain 46 193 7.6E-11 T 01-11-2018 IPR001633 EAL domain DOE78_15215 27ddc5545882ea6e639e6d0cf92abf7c 415 SUPERFAMILY SSF109604 184 407 4.39E-33 T 01-11-2018 DOE78_15215 27ddc5545882ea6e639e6d0cf92abf7c 415 SUPERFAMILY SSF141868 2 198 3.4E-21 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_15215 27ddc5545882ea6e639e6d0cf92abf7c 415 Pfam PF08668 HDOD domain 201 310 7.1E-14 T 01-11-2018 IPR013976 Metal-dependent hydrolase HDOD DOE78_15215 27ddc5545882ea6e639e6d0cf92abf7c 415 Gene3D G3DSA:3.20.20.450 39 196 6.2E-13 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_00715 27ec432b07da730e5ba710fe3997d0ed 199 SUPERFAMILY SSF52540 24 194 5.93E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00715 27ec432b07da730e5ba710fe3997d0ed 199 Pfam PF01583 Adenylylsulphate kinase 25 177 2.7E-73 T 01-11-2018 DOE78_00715 27ec432b07da730e5ba710fe3997d0ed 199 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 195 39.773 T 01-11-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DOE78_00715 27ec432b07da730e5ba710fe3997d0ed 199 Gene3D G3DSA:3.40.50.300 1 199 1.8E-83 T 01-11-2018 DOE78_00715 27ec432b07da730e5ba710fe3997d0ed 199 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 191 9.0E-85 T 01-11-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DOE78_15360 746576fa03422374c7a3f99c370a4351 256 Pfam PF07070 SpoOM protein 4 214 3.4E-76 T 01-11-2018 IPR009776 Sporulation stage 0, protein M DOE78_19610 d437599b7d248e46464db59912c76f50 466 Pfam PF00425 chorismate binding enzyme 203 455 8.7E-75 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DOE78_19610 d437599b7d248e46464db59912c76f50 466 Gene3D G3DSA:3.60.120.10 7 466 6.6E-110 T 01-11-2018 IPR005801 ADC synthase GO:0009058 DOE78_19610 d437599b7d248e46464db59912c76f50 466 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 113 463 1.2E-108 T 01-11-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DOE78_19610 d437599b7d248e46464db59912c76f50 466 PRINTS PR00095 Anthranilate synthase component I signature 397 411 4.0E-7 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_19610 d437599b7d248e46464db59912c76f50 466 PRINTS PR00095 Anthranilate synthase component I signature 305 318 4.0E-7 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_19610 d437599b7d248e46464db59912c76f50 466 PRINTS PR00095 Anthranilate synthase component I signature 319 332 4.0E-7 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_19610 d437599b7d248e46464db59912c76f50 466 PRINTS PR00095 Anthranilate synthase component I signature 412 426 4.0E-7 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_19610 d437599b7d248e46464db59912c76f50 466 SUPERFAMILY SSF56322 41 463 6.28E-102 T 01-11-2018 IPR005801 ADC synthase GO:0009058 DOE78_02240 845fa10bd714ff8236ddd353f9c16867 181 Gene3D G3DSA:3.40.630.30 2 181 5.0E-34 T 01-11-2018 DOE78_02240 845fa10bd714ff8236ddd353f9c16867 181 Pfam PF00583 Acetyltransferase (GNAT) family 56 154 1.3E-19 T 01-11-2018 IPR000182 GNAT domain DOE78_02240 845fa10bd714ff8236ddd353f9c16867 181 PRINTS PR01754 Streptothricin acetyltransferase signature 146 162 1.0E-12 T 01-11-2018 IPR008125 Streptothricin acetyltransferase DOE78_02240 845fa10bd714ff8236ddd353f9c16867 181 PRINTS PR01754 Streptothricin acetyltransferase signature 125 140 1.0E-12 T 01-11-2018 IPR008125 Streptothricin acetyltransferase DOE78_02240 845fa10bd714ff8236ddd353f9c16867 181 PRINTS PR01754 Streptothricin acetyltransferase signature 101 116 1.0E-12 T 01-11-2018 IPR008125 Streptothricin acetyltransferase DOE78_02240 845fa10bd714ff8236ddd353f9c16867 181 SUPERFAMILY SSF55729 24 158 1.03E-25 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_01505 dac3412f5fd5bc06a8677886d7a5cf90 164 Pfam PF01967 MoaC family 15 152 1.9E-55 T 01-11-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_01505 dac3412f5fd5bc06a8677886d7a5cf90 164 SUPERFAMILY SSF55040 11 157 1.44E-59 T 01-11-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_01505 dac3412f5fd5bc06a8677886d7a5cf90 164 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 1.0E-64 T 01-11-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_01505 dac3412f5fd5bc06a8677886d7a5cf90 164 Gene3D G3DSA:3.30.70.640 1 162 4.3E-71 T 01-11-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_01505 dac3412f5fd5bc06a8677886d7a5cf90 164 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 35.901 T 01-11-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 Gene3D G3DSA:3.90.180.10 18 320 1.3E-97 T 01-11-2018 DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 Gene3D G3DSA:3.40.50.720 133 271 1.3E-97 T 01-11-2018 DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 SMART SM00829 10 320 9.0E-20 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 94 4.6E-6 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 Pfam PF13602 Zinc-binding dehydrogenase 192 320 8.3E-22 T 01-11-2018 DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 01-11-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 SUPERFAMILY SSF50129 1 155 1.05E-36 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_10240 cd4787a8f6a06e2477274ecc69da214c 322 SUPERFAMILY SSF51735 122 296 3.23E-34 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.9E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.9E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.9E-19 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 Gene3D G3DSA:1.10.260.40 3 59 1.9E-19 T 01-11-2018 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 Pfam PF13377 Periplasmic binding protein-like domain 167 296 2.3E-24 T 01-11-2018 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 Gene3D G3DSA:3.40.50.2300 60 295 9.0E-55 T 01-11-2018 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 Gene3D G3DSA:3.40.50.2300 158 285 9.0E-55 T 01-11-2018 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 SUPERFAMILY SSF47413 1 59 6.56E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 SUPERFAMILY SSF53822 58 295 5.89E-53 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_09805 f4008b6f7f10689934c285ff30c38b27 320 SMART SM00354 1 71 8.5E-31 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 Gene3D G3DSA:3.30.70.360 187 384 7.7E-171 T 01-11-2018 DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 Gene3D G3DSA:3.40.630.10 16 468 7.7E-171 T 01-11-2018 DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 Gene3D G3DSA:3.30.70.360 207 295 7.7E-171 T 01-11-2018 DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 SUPERFAMILY SSF53187 4 469 9.02E-66 T 01-11-2018 DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 Pfam PF01546 Peptidase family M20/M25/M40 87 466 3.6E-32 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 117 156 - T 01-11-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 SUPERFAMILY SSF55031 187 381 5.93E-51 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_19345 8904650e587a420241d6d8eacdf2b774 470 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 465 4.9E-176 T 01-11-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 DOE78_24240 70016f9ca5be1194a4364c461d4eaeb8 345 Gene3D G3DSA:3.40.50.300 100 344 3.6E-95 T 01-11-2018 DOE78_24240 70016f9ca5be1194a4364c461d4eaeb8 345 Gene3D G3DSA:3.30.450.90 1 99 5.9E-36 T 01-11-2018 DOE78_24240 70016f9ca5be1194a4364c461d4eaeb8 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 192 206 - T 01-11-2018 IPR001482 Type II/IV secretion system protein DOE78_24240 70016f9ca5be1194a4364c461d4eaeb8 345 SUPERFAMILY SSF52540 3 336 2.66E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24240 70016f9ca5be1194a4364c461d4eaeb8 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 336 3.9E-143 T 01-11-2018 IPR006321 Pilus retraction protein PilT GO:0005524 DOE78_24240 70016f9ca5be1194a4364c461d4eaeb8 345 Pfam PF00437 Type II/IV secretion system protein 11 259 1.1E-40 T 01-11-2018 IPR001482 Type II/IV secretion system protein DOE78_24240 70016f9ca5be1194a4364c461d4eaeb8 345 SMART SM00382 121 246 1.0E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18650 4cad2878625344f656a7caa08ec53331 66 Gene3D G3DSA:1.10.8.910 8 66 1.2E-29 T 01-11-2018 IPR038300 SASP, alpha/beta-type superfamily DOE78_18650 4cad2878625344f656a7caa08ec53331 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_18650 4cad2878625344f656a7caa08ec53331 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 3.0E-21 T 01-11-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DOE78_18650 4cad2878625344f656a7caa08ec53331 66 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 SUPERFAMILY SSF52172 2 134 9.11E-35 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 SMART SM00421 159 216 9.1E-28 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 215 1.8E-23 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 Pfam PF00072 Response regulator receiver domain 5 117 2.2E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 3.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 3.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 3.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 Gene3D G3DSA:3.40.50.12740 3 222 2.8E-70 T 01-11-2018 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 SUPERFAMILY SSF46894 153 223 4.42E-23 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_22965 a65cb29c97b60e3afce9ca1158dc8c40 225 SMART SM00448 3 116 2.1E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05385 70dc702255898547771277e0034b20e7 281 Pfam PF00248 Aldo/keto reductase family 32 267 1.4E-46 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain DOE78_05385 70dc702255898547771277e0034b20e7 281 PIRSF PIRSF000097 121 278 5.2E-50 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 PIRSF PIRSF000097 3 126 2.1E-40 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 131 148 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 SUPERFAMILY SSF51430 7 274 1.03E-94 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_05385 70dc702255898547771277e0034b20e7 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 235 250 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 PRINTS PR00069 Aldo-keto reductase signature 101 119 1.3E-49 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 PRINTS PR00069 Aldo-keto reductase signature 41 65 1.3E-49 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 PRINTS PR00069 Aldo-keto reductase signature 131 148 1.3E-49 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 PRINTS PR00069 Aldo-keto reductase signature 165 194 1.3E-49 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 PRINTS PR00069 Aldo-keto reductase signature 202 226 1.3E-49 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 45 62 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DOE78_05385 70dc702255898547771277e0034b20e7 281 Gene3D G3DSA:3.20.20.100 2 281 6.5E-125 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_24560 1e6dcc59f1398613ba4033eaee993b4b 264 SMART SM00849 13 218 2.4E-11 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_24560 1e6dcc59f1398613ba4033eaee993b4b 264 SUPERFAMILY SSF56281 1 237 5.9E-45 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_24560 1e6dcc59f1398613ba4033eaee993b4b 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 1.3E-22 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_24560 1e6dcc59f1398613ba4033eaee993b4b 264 Gene3D G3DSA:3.60.15.10 9 249 1.3E-45 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_09745 1d624d85fda6d804a1074ef9360cf7e9 127 Pfam PF04138 GtrA-like protein 14 126 3.0E-20 T 01-11-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DOE78_14715 115f051bd3e370188a46f3060a1f25c5 186 Pfam PF12800 4Fe-4S binding domain 10 23 0.077 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_14715 115f051bd3e370188a46f3060a1f25c5 186 SUPERFAMILY SSF54862 3 156 9.52E-40 T 01-11-2018 DOE78_14715 115f051bd3e370188a46f3060a1f25c5 186 Pfam PF13247 4Fe-4S dicluster domain 47 137 8.8E-22 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_14715 115f051bd3e370188a46f3060a1f25c5 186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_14715 115f051bd3e370188a46f3060a1f25c5 186 Gene3D G3DSA:3.30.70.20 2 177 3.5E-32 T 01-11-2018 DOE78_17635 1310a996924d7a0d0b44f2b30a50b9d6 232 Pfam PF01048 Phosphorylase superfamily 2 227 2.6E-55 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DOE78_17635 1310a996924d7a0d0b44f2b30a50b9d6 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 230 1.7E-111 T 01-11-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_17635 1310a996924d7a0d0b44f2b30a50b9d6 232 SUPERFAMILY SSF53167 2 230 5.37E-72 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DOE78_17635 1310a996924d7a0d0b44f2b30a50b9d6 232 Gene3D G3DSA:3.40.50.1580 1 232 1.4E-73 T 01-11-2018 DOE78_17635 1310a996924d7a0d0b44f2b30a50b9d6 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.955 T 01-11-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DOE78_23670 7bf3de0ce8bace646babbc51cc03d19f 124 Gene3D G3DSA:1.20.58.1610 3 124 6.1E-43 T 01-11-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23670 7bf3de0ce8bace646babbc51cc03d19f 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 9.3E-38 T 01-11-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23670 7bf3de0ce8bace646babbc51cc03d19f 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.632 T 01-11-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 DOE78_11990 e43f01f02de686055c7116bc1a4545b5 398 SUPERFAMILY SSF52540 3 299 4.25E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11990 e43f01f02de686055c7116bc1a4545b5 398 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 210 7.1E-59 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE78_11990 e43f01f02de686055c7116bc1a4545b5 398 Gene3D G3DSA:3.40.50.300 2 229 3.1E-72 T 01-11-2018 DOE78_11990 e43f01f02de686055c7116bc1a4545b5 398 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 371 6.5E-26 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE78_11990 e43f01f02de686055c7116bc1a4545b5 398 Gene3D G3DSA:3.30.1220.10 239 371 4.2E-5 T 01-11-2018 IPR036627 CobW-like, C-terminal domain superfamily DOE78_11990 e43f01f02de686055c7116bc1a4545b5 398 SMART SM00833 256 371 1.8E-48 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE78_02245 a721c9c697b1290187712932a0c1251c 135 Pfam PF07366 SnoaL-like polyketide cyclase 9 133 1.0E-31 T 01-11-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 DOE78_02245 a721c9c697b1290187712932a0c1251c 135 Gene3D G3DSA:3.10.450.50 2 134 3.9E-36 T 01-11-2018 DOE78_02245 a721c9c697b1290187712932a0c1251c 135 SUPERFAMILY SSF54427 4 133 2.85E-35 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_03860 2b9e01bdee65ca8f8eb6c5df2b4427ab 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 397 9.5E-11 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DOE78_03860 2b9e01bdee65ca8f8eb6c5df2b4427ab 465 Gene3D G3DSA:3.90.190.20 317 463 8.4E-28 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_03860 2b9e01bdee65ca8f8eb6c5df2b4427ab 465 Gene3D G3DSA:3.40.1190.10 85 314 4.6E-56 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_03860 2b9e01bdee65ca8f8eb6c5df2b4427ab 465 SUPERFAMILY SSF53244 318 453 4.35E-23 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_03860 2b9e01bdee65ca8f8eb6c5df2b4427ab 465 SUPERFAMILY SSF53623 103 314 9.55E-47 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_03860 2b9e01bdee65ca8f8eb6c5df2b4427ab 465 Pfam PF08245 Mur ligase middle domain 108 297 5.9E-40 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DOE78_09480 aee0c4cd5c761bea1d1d08371a6edc0d 204 Pfam PF01184 GPR1/FUN34/yaaH family 10 189 1.0E-19 T 01-11-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DOE78_06420 dfdeab2603f737023fa1938008e26ed3 102 Gene3D G3DSA:3.30.300.130 1 102 1.3E-36 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily DOE78_06420 dfdeab2603f737023fa1938008e26ed3 102 SUPERFAMILY SSF117916 3 100 4.58E-32 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily DOE78_06420 dfdeab2603f737023fa1938008e26ed3 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 9.5E-22 T 01-11-2018 IPR002744 MIP18 family-like DOE78_17590 3108426e8ffd4952a312f0e4abec123f 372 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 11 372 3.9E-160 T 01-11-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH DOE78_17590 3108426e8ffd4952a312f0e4abec123f 372 Gene3D G3DSA:3.40.50.300 62 230 3.1E-50 T 01-11-2018 DOE78_17590 3108426e8ffd4952a312f0e4abec123f 372 Pfam PF01926 50S ribosome-binding GTPase 168 230 2.3E-14 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17590 3108426e8ffd4952a312f0e4abec123f 372 SUPERFAMILY SSF52540 76 285 8.6E-32 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 SUPERFAMILY SSF46785 4 143 3.33E-30 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 Gene3D G3DSA:1.10.10.10 2 145 1.5E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 SMART SM00347 21 121 8.8E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 Pfam PF01047 MarR family 28 85 2.1E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11235 9e638582b453f1bde781c044c4d3d1e9 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_13930 1660072930d6142b7a751c1197451243 305 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 304 32.606 T 01-11-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DOE78_13930 1660072930d6142b7a751c1197451243 305 Pfam PF07475 HPr Serine kinase C-terminal domain 132 300 2.0E-60 T 01-11-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DOE78_13930 1660072930d6142b7a751c1197451243 305 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 4 304 1.7E-100 T 01-11-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DOE78_13930 1660072930d6142b7a751c1197451243 305 Gene3D G3DSA:3.40.50.300 132 305 6.4E-55 T 01-11-2018 DOE78_13930 1660072930d6142b7a751c1197451243 305 SUPERFAMILY SSF75138 4 130 1.02E-31 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE78_13930 1660072930d6142b7a751c1197451243 305 Gene3D G3DSA:3.40.1390.20 3 131 1.3E-37 T 01-11-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DOE78_13930 1660072930d6142b7a751c1197451243 305 Pfam PF02603 HPr Serine kinase N terminus 5 129 4.2E-36 T 01-11-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DOE78_13930 1660072930d6142b7a751c1197451243 305 SUPERFAMILY SSF53795 135 302 2.84E-32 T 01-11-2018 DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 SMART SM00450 93 188 1.1E-21 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 SUPERFAMILY SSF64307 4 77 4.45E-24 T 01-11-2018 IPR036868 TusA-like domain superfamily DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 01-11-2018 IPR001455 TusA-like domain DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 Pfam PF00581 Rhodanese-like domain 94 183 3.0E-16 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 Gene3D G3DSA:3.30.110.40 3 78 1.3E-29 T 01-11-2018 IPR036868 TusA-like domain superfamily DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 Gene3D G3DSA:3.40.250.10 90 186 3.6E-29 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 SUPERFAMILY SSF52821 85 184 5.37E-32 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01075 6869154d938ab3b0f5ed9357b2ba9323 191 Pfam PF01206 Sulfurtransferase TusA 8 77 6.1E-22 T 01-11-2018 IPR001455 TusA-like domain DOE78_02830 99d43ff7a9cad13ff6a9666013604e93 152 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 152 63.434 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_02830 99d43ff7a9cad13ff6a9666013604e93 152 SUPERFAMILY SSF52304 3 147 1.03E-56 T 01-11-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_02830 99d43ff7a9cad13ff6a9666013604e93 152 PIRSF PIRSF001399 1 147 4.6E-59 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_02830 99d43ff7a9cad13ff6a9666013604e93 152 Gene3D G3DSA:3.40.50.9100 1 151 2.8E-62 T 01-11-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_02830 99d43ff7a9cad13ff6a9666013604e93 152 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 140 3.0E-53 T 01-11-2018 DOE78_02830 99d43ff7a9cad13ff6a9666013604e93 152 Pfam PF01220 Dehydroquinase class II 3 140 9.5E-57 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_02830 99d43ff7a9cad13ff6a9666013604e93 152 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 2.2E-57 T 01-11-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 SMART SM00363 353 415 7.6E-7 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 Pfam PF01479 S4 domain 357 400 7.7E-9 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 Gene3D G3DSA:3.10.290.10 326 419 2.3E-34 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 Pfam PF00579 tRNA synthetases class I (W and Y) 28 323 3.2E-88 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 Gene3D G3DSA:3.40.50.620 1 222 1.4E-90 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 SUPERFAMILY SSF52374 1 323 1.57E-112 T 01-11-2018 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 419 46.155 T 01-11-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 Gene3D G3DSA:1.10.240.10 223 325 8.9E-40 T 01-11-2018 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 8.1E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 8.1E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 8.1E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 8.1E-31 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 SUPERFAMILY SSF55174 321 418 1.83E-22 T 01-11-2018 DOE78_19160 9b8e98bfbfcba0885bdede0310c3bc1f 419 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 418 4.2E-140 T 01-11-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DOE78_13175 a7a5c4e1d3791bc200c63aedca2b0340 595 SUPERFAMILY SSF55486 6 579 1.34E-114 T 01-11-2018 DOE78_13175 a7a5c4e1d3791bc200c63aedca2b0340 595 Gene3D G3DSA:1.20.140.70 26 178 1.3E-41 T 01-11-2018 DOE78_13175 a7a5c4e1d3791bc200c63aedca2b0340 595 Pfam PF08439 Oligopeptidase F 114 182 1.4E-19 T 01-11-2018 IPR013647 Oligopeptidase F, N-terminal domain DOE78_13175 a7a5c4e1d3791bc200c63aedca2b0340 595 Gene3D G3DSA:1.10.287.830 180 225 2.4E-15 T 01-11-2018 DOE78_13175 a7a5c4e1d3791bc200c63aedca2b0340 595 Gene3D G3DSA:1.10.1370.20 227 595 1.0E-129 T 01-11-2018 DOE78_13175 a7a5c4e1d3791bc200c63aedca2b0340 595 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 7 593 7.6E-186 T 01-11-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 DOE78_13175 a7a5c4e1d3791bc200c63aedca2b0340 595 Pfam PF01432 Peptidase family M3 203 583 8.4E-67 T 01-11-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DOE78_21250 bc5d072b2136065f2e886aa7e3a25707 325 Pfam PF01497 Periplasmic binding protein 62 300 3.5E-30 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain DOE78_21250 bc5d072b2136065f2e886aa7e3a25707 325 Gene3D G3DSA:3.40.50.1980 43 152 7.4E-33 T 01-11-2018 DOE78_21250 bc5d072b2136065f2e886aa7e3a25707 325 Gene3D G3DSA:3.40.50.1980 153 325 1.9E-63 T 01-11-2018 DOE78_21250 bc5d072b2136065f2e886aa7e3a25707 325 SUPERFAMILY SSF53807 45 319 6.25E-64 T 01-11-2018 DOE78_09335 0865986db9208d81250de1c7d6f8b001 265 Pfam PF00005 ABC transporter 18 170 2.4E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_09335 0865986db9208d81250de1c7d6f8b001 265 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_09335 0865986db9208d81250de1c7d6f8b001 265 SUPERFAMILY SSF52540 2 237 6.9E-51 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09335 0865986db9208d81250de1c7d6f8b001 265 Gene3D G3DSA:3.40.50.300 1 255 4.7E-62 T 01-11-2018 DOE78_09335 0865986db9208d81250de1c7d6f8b001 265 SMART SM00382 27 220 8.2E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_02430 6eaa378bbd07ec066806ca31bf9624f7 250 SUPERFAMILY SSF55469 1 249 1.13E-62 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_02430 6eaa378bbd07ec066806ca31bf9624f7 250 Pfam PF00881 Nitroreductase family 9 165 6.2E-20 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DOE78_02430 6eaa378bbd07ec066806ca31bf9624f7 250 PIRSF PIRSF005426 1 250 7.1E-85 T 01-11-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 DOE78_02430 6eaa378bbd07ec066806ca31bf9624f7 250 Gene3D G3DSA:3.40.109.10 1 250 8.1E-72 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 172 2.0E-50 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 Pfam PF01327 Polypeptide deformylase 5 171 6.6E-48 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 SUPERFAMILY SSF56420 1 179 3.01E-59 T 01-11-2018 IPR036821 Peptide deformylase superfamily DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 PIRSF PIRSF004749 2 183 3.9E-48 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 PRINTS PR01576 Peptide deformylase signature 47 76 1.9E-30 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 PRINTS PR01576 Peptide deformylase signature 140 169 1.9E-30 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 PRINTS PR01576 Peptide deformylase signature 121 139 1.9E-30 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 PRINTS PR01576 Peptide deformylase signature 108 119 1.9E-30 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 Gene3D G3DSA:3.90.45.10 1 184 3.3E-65 T 01-11-2018 IPR036821 Peptide deformylase superfamily DOE78_07325 603ebad34b59a28f6c0a55513bbfb2b1 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 27.436 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 SUPERFAMILY SSF56194 197 301 3.27E-36 T 01-11-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 5.1E-28 T 01-11-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 Gene3D G3DSA:3.30.43.10 3 88 2.7E-29 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 Gene3D G3DSA:3.30.465.10 89 216 8.5E-46 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 SUPERFAMILY SSF56176 14 193 8.88E-42 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 1.3E-99 T 01-11-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 Gene3D G3DSA:3.90.78.10 217 302 2.0E-33 T 01-11-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 Pfam PF01565 FAD binding domain 35 165 7.7E-23 T 01-11-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DOE78_07725 d73946e0912a8fe16c6a842e253edea4 302 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 302 87.935 T 01-11-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 Pfam PF06826 Predicted Permease Membrane Region 11 163 2.1E-36 T 01-11-2018 IPR006512 YidE/YbjL duplication DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 Pfam PF06826 Predicted Permease Membrane Region 356 525 2.9E-39 T 01-11-2018 IPR006512 YidE/YbjL duplication DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 Gene3D G3DSA:3.30.70.1450 271 345 2.6E-13 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 361 512 1.3E-33 T 01-11-2018 IPR006512 YidE/YbjL duplication DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 150 2.8E-24 T 01-11-2018 IPR006512 YidE/YbjL duplication DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 Gene3D G3DSA:3.30.70.1450 181 256 1.9E-10 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 Pfam PF02080 TrkA-C domain 276 341 4.2E-12 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 Pfam PF02080 TrkA-C domain 197 255 1.7E-7 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 SUPERFAMILY SSF116726 189 259 1.44E-9 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_09785 a04adaf5dd4a474b40456055805ee3a4 528 SUPERFAMILY SSF116726 268 341 1.2E-12 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_11965 f031bef26225502e4e564867c19f51e9 477 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 372 465 4.8E-7 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_11965 f031bef26225502e4e564867c19f51e9 477 Gene3D G3DSA:2.60.120.560 353 475 9.4E-9 T 01-11-2018 DOE78_11965 f031bef26225502e4e564867c19f51e9 477 Gene3D G3DSA:2.115.10.20 1 343 1.2E-104 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_11965 f031bef26225502e4e564867c19f51e9 477 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 25 332 1.5E-89 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_11965 f031bef26225502e4e564867c19f51e9 477 SUPERFAMILY SSF49899 359 473 2.3E-9 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_11965 f031bef26225502e4e564867c19f51e9 477 SMART SM00640 25 441 3.4E-90 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_11965 f031bef26225502e4e564867c19f51e9 477 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 25 38 - T 01-11-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_11965 f031bef26225502e4e564867c19f51e9 477 SUPERFAMILY SSF75005 18 331 9.26E-97 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_13400 76df631ae3b9d209337addd5df28d71a 273 Pfam PF00005 ABC transporter 45 199 1.6E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_13400 76df631ae3b9d209337addd5df28d71a 273 SUPERFAMILY SSF52540 28 261 7.56E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13400 76df631ae3b9d209337addd5df28d71a 273 SMART SM00382 54 248 3.5E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_13400 76df631ae3b9d209337addd5df28d71a 273 Gene3D G3DSA:3.40.50.300 16 272 3.4E-58 T 01-11-2018 DOE78_13400 76df631ae3b9d209337addd5df28d71a 273 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_20660 e33c26043af27dcb872a800e5f1716f9 197 Gene3D G3DSA:3.40.50.2020 3 188 2.0E-53 T 01-11-2018 DOE78_20660 e33c26043af27dcb872a800e5f1716f9 197 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 42.336 T 01-11-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 DOE78_20660 e33c26043af27dcb872a800e5f1716f9 197 SUPERFAMILY SSF53271 1 188 7.89E-44 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_20660 e33c26043af27dcb872a800e5f1716f9 197 Pfam PF00156 Phosphoribosyl transferase domain 34 157 1.7E-6 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_20660 e33c26043af27dcb872a800e5f1716f9 197 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 190 1.2E-84 T 01-11-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 DOE78_02320 8121f137897ed332911d0d6acfae6bc2 86 Pfam PF07875 Coat F domain 3 64 8.2E-18 T 01-11-2018 IPR012851 Spore coat protein CotF-like DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 Gene3D G3DSA:3.40.50.2300 2 145 1.2E-36 T 01-11-2018 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 Gene3D G3DSA:1.10.10.60 458 512 1.4E-18 T 01-11-2018 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 491 507 1.0E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 476 491 1.0E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 SUPERFAMILY SSF52172 1 139 1.24E-35 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 SUPERFAMILY SSF48371 99 441 8.44E-5 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 Pfam PF00072 Response regulator receiver domain 4 115 3.6E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 SMART SM00448 2 115 2.8E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 SUPERFAMILY SSF46689 409 458 3.85E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 SUPERFAMILY SSF46689 460 508 7.62E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 Gene3D G3DSA:1.10.10.60 405 457 1.5E-15 T 01-11-2018 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 SMART SM00342 424 507 8.5E-28 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_12205 b502f3114c8126c8ac9988b7da297e07 512 Pfam PF12833 Helix-turn-helix domain 430 508 2.2E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 SUPERFAMILY SSF52540 448 687 2.17E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 Gene3D G3DSA:3.40.50.300 697 899 1.6E-89 T 01-11-2018 DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 Pfam PF00271 Helicase conserved C-terminal domain 773 885 6.0E-20 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 SMART SM00490 802 885 8.4E-24 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 Pfam PF12419 SNF2 Helicase protein 289 417 1.2E-35 T 01-11-2018 IPR022138 Helicase SWF/SNF-related DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 SUPERFAMILY SSF52540 692 938 1.42E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 Gene3D G3DSA:3.40.50.10810 474 688 2.2E-68 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 Pfam PF00176 SNF2 family N-terminal domain 487 757 7.3E-59 T 01-11-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 SMART SM00487 469 659 7.5E-29 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_23480 5cca0b1f19dc672f5a821547d1f2cf4e 941 Gene3D G3DSA:1.20.120.850 711 934 1.6E-89 T 01-11-2018 DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 SUPERFAMILY SSF55781 286 451 1.68E-12 T 01-11-2018 DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 SMART SM00267 453 616 1.0E-55 T 01-11-2018 IPR000160 GGDEF domain DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 Gene3D G3DSA:3.30.450.40 305 458 7.2E-15 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 SUPERFAMILY SSF55781 160 313 5.45E-17 T 01-11-2018 DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 Gene3D G3DSA:3.30.70.270 459 618 2.8E-44 T 01-11-2018 DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 Pfam PF00990 Diguanylate cyclase, GGDEF domain 465 612 9.7E-40 T 01-11-2018 IPR000160 GGDEF domain DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 460 616 8.6E-41 T 01-11-2018 IPR000160 GGDEF domain DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 Gene3D G3DSA:3.30.450.40 162 303 1.3E-15 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 SMART SM00065 28 301 0.0038 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 SMART SM00065 322 461 0.051 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_18690 b288adacc03eee53ab77fd11ad8d950d 622 SUPERFAMILY SSF55073 469 616 3.45E-39 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_00765 901fe4557b4f86533767c0cd922a6185 67 SUPERFAMILY SSF46561 1 64 3.01E-24 T 01-11-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00765 901fe4557b4f86533767c0cd922a6185 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 01-11-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00765 901fe4557b4f86533767c0cd922a6185 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.728 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00765 901fe4557b4f86533767c0cd922a6185 67 Pfam PF00831 Ribosomal L29 protein 4 60 5.9E-26 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00765 901fe4557b4f86533767c0cd922a6185 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.7E-24 T 01-11-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00765 901fe4557b4f86533767c0cd922a6185 67 Gene3D G3DSA:1.10.287.310 1 66 3.3E-31 T 01-11-2018 DOE78_20735 17228f9a21178c595bee44d90b940718 330 SUPERFAMILY SSF51735 115 251 1.38E-18 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_20735 17228f9a21178c595bee44d90b940718 330 Gene3D G3DSA:1.10.287.70 2 98 9.8E-20 T 01-11-2018 DOE78_20735 17228f9a21178c595bee44d90b940718 330 Pfam PF07885 Ion channel 22 93 1.6E-12 T 01-11-2018 IPR013099 Potassium channel domain DOE78_20735 17228f9a21178c595bee44d90b940718 330 Gene3D G3DSA:3.40.50.720 111 253 5.4E-26 T 01-11-2018 DOE78_20735 17228f9a21178c595bee44d90b940718 330 SUPERFAMILY SSF81324 12 137 1.44E-23 T 01-11-2018 DOE78_20735 17228f9a21178c595bee44d90b940718 330 Pfam PF02254 TrkA-N domain 117 238 1.4E-15 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DOE78_14805 0e985a83e992713daaa131971a350948 412 SUPERFAMILY SSF56176 326 405 1.99E-13 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_14805 0e985a83e992713daaa131971a350948 412 Gene3D G3DSA:3.30.465.10 325 406 3.0E-16 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_14805 0e985a83e992713daaa131971a350948 412 SMART SM01091 331 408 2.5E-14 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_14805 0e985a83e992713daaa131971a350948 412 Pfam PF01595 Domain of unknown function DUF21 4 179 2.2E-46 T 01-11-2018 IPR002550 CNNM, transmembrane domain DOE78_14805 0e985a83e992713daaa131971a350948 412 SUPERFAMILY SSF54631 183 315 1.11E-24 T 01-11-2018 DOE78_14805 0e985a83e992713daaa131971a350948 412 Pfam PF00571 CBS domain 266 313 2.3E-5 T 01-11-2018 IPR000644 CBS domain DOE78_14805 0e985a83e992713daaa131971a350948 412 Gene3D G3DSA:3.10.580.10 174 324 7.8E-39 T 01-11-2018 DOE78_14805 0e985a83e992713daaa131971a350948 412 Pfam PF03471 Transporter associated domain 332 406 4.9E-15 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_13305 68273e35fe18844a34e6f4a4c7ce97a4 661 SUPERFAMILY SSF53649 243 634 1.8E-78 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_13305 68273e35fe18844a34e6f4a4c7ce97a4 661 Gene3D G3DSA:3.40.720.10 237 545 3.6E-80 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_13305 68273e35fe18844a34e6f4a4c7ce97a4 661 Pfam PF00884 Sulfatase 245 535 7.5E-39 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DOE78_13305 68273e35fe18844a34e6f4a4c7ce97a4 661 PIRSF PIRSF005091 1 619 5.0E-193 T 01-11-2018 IPR012160 Lipoteichoic acid synthase-like DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Gene3D G3DSA:1.10.287.130 372 451 2.5E-29 T 01-11-2018 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 543 5.3E-20 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 557 5.3E-20 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 582 5.3E-20 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 5.3E-20 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Gene3D G3DSA:1.10.287.130 206 276 7.2E-10 T 01-11-2018 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SUPERFAMILY SSF47384 366 447 1.06E-19 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Gene3D G3DSA:3.30.450.20 277 371 2.8E-18 T 01-11-2018 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Pfam PF00989 PAS fold 269 329 4.9E-5 T 01-11-2018 IPR013767 PAS fold GO:0006355 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Gene3D G3DSA:3.30.450.20 32 186 7.6E-37 T 01-11-2018 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Gene3D G3DSA:3.30.565.10 452 610 3.7E-50 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Pfam PF00672 HAMP domain 209 257 1.8E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SMART SM00388 380 447 1.6E-21 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SUPERFAMILY SSF158472 209 257 2.62E-10 T 01-11-2018 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SMART SM00387 492 604 4.1E-44 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SMART SM00304 208 260 6.7E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 603 2.2E-31 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SUPERFAMILY SSF55874 436 602 9.04E-50 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SUPERFAMILY SSF55785 255 372 7.15E-9 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 SMART SM00091 267 333 3.8E-4 T 01-11-2018 IPR000014 PAS domain DOE78_24575 3e24a857451dd0d8082470546b3f7739 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 381 446 3.7E-19 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 SUPERFAMILY SSF89000 287 335 2.2E-17 T 01-11-2018 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 341 182.493 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 Gene3D G3DSA:3.20.20.70 1 267 1.2E-88 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 Pfam PF07836 DmpG-like communication domain 273 334 1.5E-30 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 271 333 2.0E-22 T 01-11-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 6 335 9.6E-166 T 01-11-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 SUPERFAMILY SSF51569 3 270 2.56E-67 T 01-11-2018 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 Pfam PF00682 HMGL-like 7 261 3.7E-60 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DOE78_09230 97353e3d20fd6f045ce5ac34bf093f40 341 Gene3D G3DSA:1.10.8.60 274 340 3.6E-28 T 01-11-2018 DOE78_03390 e188a40e304cc33311f176eb3d919086 124 Pfam PF09350 Domain of unknown function (DUF1992) 8 73 1.9E-23 T 01-11-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain DOE78_23735 039183c513d7687f3bae6a3c261a81eb 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 2.1E-92 T 01-11-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DOE78_23735 039183c513d7687f3bae6a3c261a81eb 209 SUPERFAMILY SSF53271 4 207 6.95E-74 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_23735 039183c513d7687f3bae6a3c261a81eb 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.4E-74 T 01-11-2018 DOE78_23735 039183c513d7687f3bae6a3c261a81eb 209 Gene3D G3DSA:3.40.50.2020 1 209 8.8E-83 T 01-11-2018 DOE78_23735 039183c513d7687f3bae6a3c261a81eb 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.475 T 01-11-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DOE78_23970 7bb48429f894dde2f9686d85aeb26823 325 Pfam PF01515 Phosphate acetyl/butaryl transferase 8 319 9.2E-127 T 01-11-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DOE78_23970 7bb48429f894dde2f9686d85aeb26823 325 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 6.9E-124 T 01-11-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DOE78_23970 7bb48429f894dde2f9686d85aeb26823 325 PIRSF PIRSF000428 1 325 2.1E-110 T 01-11-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DOE78_23970 7bb48429f894dde2f9686d85aeb26823 325 Gene3D G3DSA:3.40.50.10750 142 295 1.2E-130 T 01-11-2018 DOE78_23970 7bb48429f894dde2f9686d85aeb26823 325 SUPERFAMILY SSF53659 4 322 4.52E-93 T 01-11-2018 DOE78_23970 7bb48429f894dde2f9686d85aeb26823 325 Gene3D G3DSA:3.40.50.10950 18 319 1.2E-130 T 01-11-2018 DOE78_04110 cbe6dd681855edd69e9b00c09dc34581 305 PRINTS PR00069 Aldo-keto reductase signature 185 214 4.7E-5 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_04110 cbe6dd681855edd69e9b00c09dc34581 305 PRINTS PR00069 Aldo-keto reductase signature 233 257 4.7E-5 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_04110 cbe6dd681855edd69e9b00c09dc34581 305 PRINTS PR00069 Aldo-keto reductase signature 101 119 4.7E-5 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_04110 cbe6dd681855edd69e9b00c09dc34581 305 Gene3D G3DSA:3.20.20.100 1 305 3.1E-91 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_04110 cbe6dd681855edd69e9b00c09dc34581 305 SUPERFAMILY SSF51430 2 300 8.51E-75 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_04110 cbe6dd681855edd69e9b00c09dc34581 305 Pfam PF00248 Aldo/keto reductase family 18 296 1.1E-59 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain DOE78_14070 5ada02bbc5c52f6bffa7e413d11d44bb 284 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 16 280 4.6E-57 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_14070 5ada02bbc5c52f6bffa7e413d11d44bb 284 SUPERFAMILY SSF52518 6 280 1.43E-86 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_14070 5ada02bbc5c52f6bffa7e413d11d44bb 284 Gene3D G3DSA:3.40.50.970 1 283 2.7E-104 T 01-11-2018 DOE78_16825 69425a039e1ec1dc6e4d73354d16d3ee 562 Gene3D G3DSA:3.40.50.300 271 554 2.2E-54 T 01-11-2018 DOE78_16825 69425a039e1ec1dc6e4d73354d16d3ee 562 Gene3D G3DSA:3.40.50.300 1 254 2.8E-51 T 01-11-2018 DOE78_16825 69425a039e1ec1dc6e4d73354d16d3ee 562 PIRSF PIRSF003128 1 559 1.8E-193 T 01-11-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DOE78_16825 69425a039e1ec1dc6e4d73354d16d3ee 562 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 7.8E-17 T 01-11-2018 IPR003395 RecF/RecN/SMC, N-terminal DOE78_16825 69425a039e1ec1dc6e4d73354d16d3ee 562 SUPERFAMILY SSF52540 2 514 4.56E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16825 69425a039e1ec1dc6e4d73354d16d3ee 562 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 2.1E-194 T 01-11-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Pfam PF00877 NlpC/P60 family 244 346 1.7E-28 T 01-11-2018 IPR000064 Endopeptidase, NLPC/P60 domain DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 SMART SM00257 91 134 5.1E-16 T 01-11-2018 IPR018392 LysM domain DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 SMART SM00257 171 214 4.5E-16 T 01-11-2018 IPR018392 LysM domain DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 SMART SM00257 26 69 3.4E-15 T 01-11-2018 IPR018392 LysM domain DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Gene3D G3DSA:3.10.350.10 23 74 9.8E-18 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Gene3D G3DSA:3.10.350.10 87 139 5.3E-19 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Gene3D G3DSA:3.10.350.10 169 219 5.8E-18 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Gene3D G3DSA:3.90.1720.10 229 350 1.3E-38 T 01-11-2018 DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Pfam PF01476 LysM domain 172 213 1.2E-13 T 01-11-2018 IPR018392 LysM domain DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Pfam PF01476 LysM domain 92 133 1.7E-13 T 01-11-2018 IPR018392 LysM domain DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 Pfam PF01476 LysM domain 27 68 2.8E-14 T 01-11-2018 IPR018392 LysM domain DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 SUPERFAMILY SSF54106 170 213 5.62E-11 T 01-11-2018 DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 SUPERFAMILY SSF54106 26 68 3.66E-11 T 01-11-2018 DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 SUPERFAMILY SSF54001 233 349 1.01E-36 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily DOE78_23315 a8c163907a00f80b1dc7edd9435d1f4b 350 SUPERFAMILY SSF54106 89 133 2.62E-11 T 01-11-2018 DOE78_13360 d2759273e9f8bea504ea46586f4a4f35 457 Gene3D G3DSA:3.40.630.10 18 446 1.4E-170 T 01-11-2018 DOE78_13360 d2759273e9f8bea504ea46586f4a4f35 457 SUPERFAMILY SSF53187 2 454 1.86E-67 T 01-11-2018 DOE78_13360 d2759273e9f8bea504ea46586f4a4f35 457 Pfam PF01546 Peptidase family M20/M25/M40 83 449 1.2E-36 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_13360 d2759273e9f8bea504ea46586f4a4f35 457 Gene3D G3DSA:3.30.70.360 203 373 1.4E-170 T 01-11-2018 DOE78_13360 d2759273e9f8bea504ea46586f4a4f35 457 Pfam PF07687 Peptidase dimerisation domain 194 353 2.2E-23 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 Gene3D G3DSA:3.40.50.1010 10 284 1.6E-88 T 01-11-2018 DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 SMART SM00475 7 269 1.6E-118 T 01-11-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 SUPERFAMILY SSF47807 179 291 1.41E-30 T 01-11-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 SUPERFAMILY SSF88723 9 161 2.21E-46 T 01-11-2018 IPR029060 PIN-like domain superfamily DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 10 157 1.7E-50 T 01-11-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 Gene3D G3DSA:1.10.150.20 182 254 1.6E-88 T 01-11-2018 DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 SMART SM00279 181 216 1.2E-17 T 01-11-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DOE78_15750 bceba5577c75a2b7cf2515d29b33bf58 298 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 180 268 7.5E-30 T 01-11-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DOE78_22330 b4fb6d68fc5a79abb66c99001195ec5b 338 PIRSF PIRSF004776 1 338 3.5E-82 T 01-11-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 DOE78_22330 b4fb6d68fc5a79abb66c99001195ec5b 338 SUPERFAMILY SSF52374 3 166 4.5E-18 T 01-11-2018 DOE78_22330 b4fb6d68fc5a79abb66c99001195ec5b 338 SUPERFAMILY SSF52540 164 334 1.3E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22330 b4fb6d68fc5a79abb66c99001195ec5b 338 Gene3D G3DSA:3.40.50.300 165 330 1.6E-53 T 01-11-2018 DOE78_22330 b4fb6d68fc5a79abb66c99001195ec5b 338 Pfam PF13521 AAA domain 167 326 1.0E-31 T 01-11-2018 IPR038727 NadR/Ttd14, AAA domain DOE78_22330 b4fb6d68fc5a79abb66c99001195ec5b 338 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 40 2.2E-8 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_22330 b4fb6d68fc5a79abb66c99001195ec5b 338 Gene3D G3DSA:3.40.50.620 2 164 2.5E-35 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_03635 c2259113f247c4b075ff52bbb1f21a61 210 Gene3D G3DSA:3.20.20.70 1 209 9.9E-73 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_03635 c2259113f247c4b075ff52bbb1f21a61 210 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 207 3.9E-84 T 01-11-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 DOE78_03635 c2259113f247c4b075ff52bbb1f21a61 210 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 202 4.2E-27 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_03635 c2259113f247c4b075ff52bbb1f21a61 210 SUPERFAMILY SSF51366 3 209 4.44E-40 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_03635 c2259113f247c4b075ff52bbb1f21a61 210 SMART SM00934 2 203 5.4E-37 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 SUPERFAMILY SSF47323 317 464 2.09E-33 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 Gene3D G3DSA:3.40.50.620 1 305 2.4E-134 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 7.2E-188 T 01-11-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.7E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.7E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.7E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.7E-29 T 01-11-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 SUPERFAMILY SSF52374 4 311 6.44E-103 T 01-11-2018 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 313 2.6E-136 T 01-11-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 38.759 T 01-11-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 Gene3D G3DSA:1.20.120.640 306 464 5.3E-33 T 01-11-2018 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 Pfam PF09190 DALR domain 354 412 2.2E-12 T 01-11-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DOE78_00600 faf5cd6f0d1b2f0a6adf2185e11efbe0 465 SMART SM00840 353 416 4.0E-11 T 01-11-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DOE78_22335 187f857c4215be895dd4b216e578db23 226 Pfam PF04973 Nicotinamide mononucleotide transporter 30 218 4.9E-47 T 01-11-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DOE78_22335 187f857c4215be895dd4b216e578db23 226 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 29 219 1.0E-51 T 01-11-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DOE78_16560 db3ed0bdae7c52df12b0d6168319c806 69 Gene3D G3DSA:3.40.5.90 2 67 1.3E-15 T 01-11-2018 DOE78_16560 db3ed0bdae7c52df12b0d6168319c806 69 SMART SM00704 20 60 4.7E-4 T 01-11-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 DOE78_16560 db3ed0bdae7c52df12b0d6168319c806 69 Pfam PF09360 Iron-binding zinc finger CDGSH type 11 55 2.0E-17 T 01-11-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 DOE78_13325 b996c9893cddf2231b9b300f7713e39c 350 PIRSF PIRSF001123 6 349 8.5E-48 T 01-11-2018 IPR008007 Peptidase M42 DOE78_13325 b996c9893cddf2231b9b300f7713e39c 350 SUPERFAMILY SSF53187 8 345 7.04E-57 T 01-11-2018 DOE78_13325 b996c9893cddf2231b9b300f7713e39c 350 Gene3D G3DSA:2.40.30.40 78 172 2.1E-125 T 01-11-2018 IPR023367 Peptidase M42, domain 2 DOE78_13325 b996c9893cddf2231b9b300f7713e39c 350 Gene3D G3DSA:3.40.630.10 15 343 2.1E-125 T 01-11-2018 DOE78_13325 b996c9893cddf2231b9b300f7713e39c 350 Pfam PF05343 M42 glutamyl aminopeptidase 50 338 8.8E-92 T 01-11-2018 IPR008007 Peptidase M42 DOE78_13325 b996c9893cddf2231b9b300f7713e39c 350 SUPERFAMILY SSF101821 75 187 7.48E-33 T 01-11-2018 DOE78_07905 e0e23c8502361d9dcc6a5e637bfdd9de 70 SMART SM01409 8 61 2.3E-14 T 01-11-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DOE78_07905 e0e23c8502361d9dcc6a5e637bfdd9de 70 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 14.46 T 01-11-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_07905 e0e23c8502361d9dcc6a5e637bfdd9de 70 Gene3D G3DSA:3.90.940.10 1 70 4.8E-20 T 01-11-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DOE78_07905 e0e23c8502361d9dcc6a5e637bfdd9de 70 SUPERFAMILY SSF63562 1 66 1.92E-22 T 01-11-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DOE78_07905 e0e23c8502361d9dcc6a5e637bfdd9de 70 Pfam PF01192 RNA polymerase Rpb6 9 61 9.1E-15 T 01-11-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DOE78_07905 e0e23c8502361d9dcc6a5e637bfdd9de 70 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-20 T 01-11-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_21620 38617d846b7d983e3281455ef5322a03 456 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 271 308 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21620 38617d846b7d983e3281455ef5322a03 456 Gene3D G3DSA:3.40.640.10 106 356 9.9E-180 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_21620 38617d846b7d983e3281455ef5322a03 456 Pfam PF00202 Aminotransferase class-III 80 452 7.6E-103 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21620 38617d846b7d983e3281455ef5322a03 456 SUPERFAMILY SSF53383 80 453 9.6E-123 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_21620 38617d846b7d983e3281455ef5322a03 456 PIRSF PIRSF000521 78 176 0.0031 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21620 38617d846b7d983e3281455ef5322a03 456 PIRSF PIRSF000521 170 208 1.4 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21620 38617d846b7d983e3281455ef5322a03 456 PIRSF PIRSF000521 217 455 1.0E-39 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_21620 38617d846b7d983e3281455ef5322a03 456 Gene3D G3DSA:3.90.1150.10 41 451 9.9E-180 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_14465 46353e2d693e2ece351e02daf2fabdaa 604 Gene3D G3DSA:1.10.1370.20 233 604 1.8E-122 T 01-11-2018 DOE78_14465 46353e2d693e2ece351e02daf2fabdaa 604 Pfam PF01432 Peptidase family M3 212 589 9.0E-42 T 01-11-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DOE78_14465 46353e2d693e2ece351e02daf2fabdaa 604 Pfam PF08439 Oligopeptidase F 118 187 1.2E-18 T 01-11-2018 IPR013647 Oligopeptidase F, N-terminal domain DOE78_14465 46353e2d693e2ece351e02daf2fabdaa 604 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 11 601 3.1E-205 T 01-11-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 DOE78_14465 46353e2d693e2ece351e02daf2fabdaa 604 Gene3D G3DSA:1.20.140.70 28 183 3.5E-40 T 01-11-2018 DOE78_14465 46353e2d693e2ece351e02daf2fabdaa 604 SUPERFAMILY SSF55486 6 585 1.11E-113 T 01-11-2018 DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 255 572 2.8E-60 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 SUPERFAMILY SSF49899 592 728 8.97E-17 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 SUPERFAMILY SSF75005 246 572 1.57E-68 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 Gene3D G3DSA:2.115.10.20 262 725 7.5E-115 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 592 722 1.8E-17 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 Gene3D G3DSA:2.60.120.200 31 227 3.9E-14 T 01-11-2018 DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 SUPERFAMILY SSF49899 50 225 3.96E-16 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 Gene3D G3DSA:2.60.120.560 581 724 7.5E-115 T 01-11-2018 DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 SMART SM00640 255 689 6.8E-83 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_22635 8ffd8b01fbba5c7b19337838f4b8c5d5 732 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 61 220 5.3E-7 T 01-11-2018 DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 5 475 8.6E-123 T 01-11-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 SUPERFAMILY SSF49899 348 499 5.06E-20 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 349 494 6.4E-21 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 Gene3D G3DSA:2.115.10.20 2 363 1.9E-112 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 SMART SM00640 20 465 2.5E-125 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 20 345 7.1E-97 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 SUPERFAMILY SSF75005 11 345 2.27E-105 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 Gene3D G3DSA:2.60.120.560 366 500 1.8E-21 T 01-11-2018 DOE78_22630 182832a7aa13a44155b6bb3a9cd762c9 501 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 20 33 - T 01-11-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 Gene3D G3DSA:3.90.190.20 292 430 1.4E-41 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 Gene3D G3DSA:3.40.1190.10 91 291 1.9E-52 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 428 2.5E-136 T 01-11-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 Pfam PF08245 Mur ligase middle domain 106 274 5.5E-26 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 SUPERFAMILY SSF51984 4 88 2.94E-19 T 01-11-2018 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 377 1.2E-18 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 Pfam PF01225 Mur ligase family, catalytic domain 4 101 3.6E-23 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 431 34.378 T 01-11-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 Gene3D G3DSA:3.40.50.720 3 89 3.6E-21 T 01-11-2018 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 SUPERFAMILY SSF53244 294 427 1.74E-38 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_19235 92def64f17f2a3c12d6630e4c6bb4d52 431 SUPERFAMILY SSF53623 87 292 1.57E-58 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 SUPERFAMILY SSF53738 31 233 8.24E-46 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 208 313 1.8E-24 T 01-11-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 2.3E-41 T 01-11-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Gene3D G3DSA:3.30.310.50 459 569 5.4E-10 T 01-11-2018 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Gene3D G3DSA:3.40.120.10 323 450 6.9E-37 T 01-11-2018 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 137 151 5.6E-6 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 5.6E-6 T 01-11-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Gene3D G3DSA:3.40.120.10 207 322 1.7E-23 T 01-11-2018 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 SUPERFAMILY SSF53738 302 452 2.08E-31 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 443 1.0E-22 T 01-11-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 138 147 - T 01-11-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 551 7.9E-11 T 01-11-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 SUPERFAMILY SSF53738 206 313 1.96E-20 T 01-11-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 SUPERFAMILY SSF55957 445 573 2.75E-15 T 01-11-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DOE78_05540 ae9eaf5fe68c20c0b09bbee16d51767c 577 Gene3D G3DSA:3.40.120.10 32 187 2.7E-46 T 01-11-2018 DOE78_03275 61382fc805d36c3a30074537c457fc13 118 Pfam PF10925 Protein of unknown function (DUF2680) 41 97 1.6E-21 T 01-11-2018 IPR024485 Protein of unknown function DUF2680 DOE78_03275 61382fc805d36c3a30074537c457fc13 118 ProDom PD673109 PRECURSOR SIGNAL YCKD ORF4 DOMAIN 1 102 1.0E-12 T 01-11-2018 IPR024485 Protein of unknown function DUF2680 DOE78_24035 33bf3f82984ca3b93f1d235f118b7afc 273 Gene3D G3DSA:3.40.1190.20 2 270 2.4E-88 T 01-11-2018 IPR029056 Ribokinase-like DOE78_24035 33bf3f82984ca3b93f1d235f118b7afc 273 SUPERFAMILY SSF53613 1 262 1.04E-71 T 01-11-2018 IPR029056 Ribokinase-like DOE78_24035 33bf3f82984ca3b93f1d235f118b7afc 273 Pfam PF08543 Phosphomethylpyrimidine kinase 13 259 1.1E-86 T 01-11-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DOE78_24035 33bf3f82984ca3b93f1d235f118b7afc 273 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 1.0E-78 T 01-11-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_17730 9714714c4e6b6c6bb568cc27ba311956 371 SUPERFAMILY SSF52402 9 244 3.97E-60 T 01-11-2018 DOE78_17730 9714714c4e6b6c6bb568cc27ba311956 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 358 41.8 T 01-11-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DOE78_17730 9714714c4e6b6c6bb568cc27ba311956 371 Gene3D G3DSA:2.40.30.10 279 370 2.8E-31 T 01-11-2018 DOE78_17730 9714714c4e6b6c6bb568cc27ba311956 371 Gene3D G3DSA:2.30.30.280 214 278 7.4E-25 T 01-11-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DOE78_17730 9714714c4e6b6c6bb568cc27ba311956 371 Gene3D G3DSA:3.40.50.620 1 213 8.0E-99 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_17730 9714714c4e6b6c6bb568cc27ba311956 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 357 6.8E-142 T 01-11-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DOE78_17730 9714714c4e6b6c6bb568cc27ba311956 371 Pfam PF03054 tRNA methyl transferase 9 357 1.2E-149 T 01-11-2018 DOE78_13195 d227caad3eba6854a79c511d2711cc0e 47 Pfam PF12841 YvrJ protein family 8 41 3.0E-16 T 01-11-2018 IPR024419 Protein of unknown function YvrJ DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 Pfam PF08532 Beta-galactosidase trimerisation domain 411 616 7.4E-71 T 01-11-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 Gene3D G3DSA:3.20.20.80 1 407 1.1E-141 T 01-11-2018 DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 Gene3D G3DSA:3.40.50.880 408 624 3.6E-68 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 Pfam PF02449 Beta-galactosidase 20 400 9.2E-152 T 01-11-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 SUPERFAMILY SSF51445 9 381 3.47E-113 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 Gene3D G3DSA:2.60.40.1180 625 686 1.4E-20 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 Pfam PF08533 Beta-galactosidase C-terminal domain 627 684 6.8E-12 T 01-11-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 SUPERFAMILY SSF52317 409 616 4.58E-55 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_03970 07c8bc7b4ba5f823b5cc53077e4557a3 689 PIRSF PIRSF001084 7 685 1.4E-238 T 01-11-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 SUPERFAMILY SSF55874 430 569 5.11E-21 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 570 7.4E-12 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 Gene3D G3DSA:3.30.565.10 426 575 2.9E-21 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 SMART SM00387 462 572 7.8E-10 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 Pfam PF06580 Histidine kinase 373 448 1.1E-20 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 513 1.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 1.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02745 78055d6672a74bd3c1a82045a3410d71 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 569 1.5E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_01550 4dead8935afba4a355f3ddd7139d4bfb 330 SUPERFAMILY SSF56601 13 330 2.44E-115 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_01550 4dead8935afba4a355f3ddd7139d4bfb 330 Pfam PF04960 Glutaminase 35 330 2.9E-106 T 01-11-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DOE78_01550 4dead8935afba4a355f3ddd7139d4bfb 330 Hamap MF_00313 Glutaminase [glsA]. 17 330 43.913 T 01-11-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DOE78_01550 4dead8935afba4a355f3ddd7139d4bfb 330 TIGRFAM TIGR03814 Gln_ase: glutaminase A 21 330 1.4E-115 T 01-11-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DOE78_01550 4dead8935afba4a355f3ddd7139d4bfb 330 Gene3D G3DSA:1.10.1500.10 74 211 1.8E-117 T 01-11-2018 DOE78_01550 4dead8935afba4a355f3ddd7139d4bfb 330 Gene3D G3DSA:3.40.710.10 47 330 1.8E-117 T 01-11-2018 DOE78_02405 5123b68764f9fb74c4059128f8c76056 436 Gene3D G3DSA:2.115.10.20 17 434 3.5E-134 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_02405 5123b68764f9fb74c4059128f8c76056 436 Pfam PF02435 Levansucrase/Invertase 33 426 7.4E-104 T 01-11-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 DOE78_02405 5123b68764f9fb74c4059128f8c76056 436 SUPERFAMILY SSF75005 33 423 8.99E-59 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_01240 ed17861f2a869bc5a64d0d1c9f12868e 353 SUPERFAMILY SSF81345 9 346 3.27E-81 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_01240 ed17861f2a869bc5a64d0d1c9f12868e 353 Pfam PF01032 FecCD transport family 25 346 4.8E-94 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_01240 ed17861f2a869bc5a64d0d1c9f12868e 353 Gene3D G3DSA:1.10.3470.10 12 352 6.6E-100 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_23465 a0d8b6b73adea576f4bbf6e5e6af45a7 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 270 1.1E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_23465 a0d8b6b73adea576f4bbf6e5e6af45a7 275 SUPERFAMILY SSF161098 7 275 1.03E-70 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_23465 a0d8b6b73adea576f4bbf6e5e6af45a7 275 Gene3D G3DSA:1.10.3720.10 3 263 2.3E-60 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 Pfam PF00005 ABC transporter 20 192 1.1E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 SUPERFAMILY SSF52540 4 245 9.84E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 Gene3D G3DSA:3.40.50.300 298 561 4.0E-58 T 01-11-2018 DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 Pfam PF00005 ABC transporter 352 480 1.6E-21 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 SMART SM00382 360 532 1.6E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 SMART SM00382 28 237 3.7E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 Gene3D G3DSA:3.40.50.300 2 286 2.0E-73 T 01-11-2018 DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 Pfam PF12848 ABC transporter 231 324 1.7E-23 T 01-11-2018 IPR032781 ABC-transporter extension domain DOE78_03240 dc6efd7a2b4d99c393dd5909a7acb67e 627 SUPERFAMILY SSF52540 321 536 1.52E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 Gene3D G3DSA:3.40.50.720 3 353 6.7E-138 T 01-11-2018 DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 SMART SM01003 4 136 1.5E-71 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 Gene3D G3DSA:3.40.50.720 129 305 6.7E-138 T 01-11-2018 DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 SUPERFAMILY SSF52283 1 359 7.4E-65 T 01-11-2018 DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 SUPERFAMILY SSF51735 136 303 6.13E-44 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 PIRSF PIRSF000183 1 367 1.3E-179 T 01-11-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.0E-44 T 01-11-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 01-11-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 4.3E-81 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 SMART SM01002 148 297 7.9E-84 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOE78_13270 7a83856de5ff04c6e65cad9dd864324d 367 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 365 2.3E-169 T 01-11-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 Gene3D G3DSA:3.40.50.10490 44 224 9.2E-76 T 01-11-2018 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 01-11-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 1.2E-26 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 1.2E-26 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 1.2E-26 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 1.2E-26 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 1.2E-26 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 1.2E-26 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 Pfam PF00342 Phosphoglucose isomerase 76 296 2.2E-18 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 SUPERFAMILY SSF53697 5 447 1.02E-146 T 01-11-2018 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 01-11-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.055 T 01-11-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 Gene3D G3DSA:3.40.50.10490 1 43 8.3E-19 T 01-11-2018 DOE78_20745 ac7e59a0a796bdb8a5ad2234e5dd5faa 448 Gene3D G3DSA:3.40.50.10490 225 417 1.5E-82 T 01-11-2018 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 Gene3D G3DSA:3.30.70.1660 110 340 1.4E-95 T 01-11-2018 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 SMART SM00937 63 177 1.0E-64 T 01-11-2018 IPR005139 Peptide chain release factor GO:0006415 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 01-11-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 Gene3D G3DSA:3.30.160.20 209 295 1.4E-95 T 01-11-2018 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 Pfam PF00472 RF-1 domain 210 319 2.5E-39 T 01-11-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.808 T 01-11-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 355 1.2E-170 T 01-11-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 SUPERFAMILY SSF75620 8 351 7.46E-133 T 01-11-2018 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 Pfam PF03462 PCRF domain 9 202 4.4E-75 T 01-11-2018 IPR005139 Peptide chain release factor GO:0006415 DOE78_23790 288aab3d6a7d2400af8d396f808f419a 357 Gene3D G3DSA:1.20.58.410 1 100 1.1E-9 T 01-11-2018 DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 SUPERFAMILY SSF89082 163 250 9.02E-29 T 01-11-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 4.5E-8 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 4.5E-8 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 4.5E-8 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 Gene3D G3DSA:1.10.1660.10 2 144 4.4E-45 T 01-11-2018 DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 Gene3D G3DSA:1.10.490.50 163 251 1.2E-25 T 01-11-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 Pfam PF13411 MerR HTH family regulatory protein 3 71 5.1E-18 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 Pfam PF07739 TipAS antibiotic-recognition domain 135 249 5.4E-38 T 01-11-2018 IPR012925 TipAS antibiotic-recognition domain DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 SUPERFAMILY SSF46955 3 109 8.06E-29 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_09575 7e03ec02cccdb7ae30806a856c58d554 251 SMART SM00422 3 72 5.8E-25 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_18540 0e1719993c331fdc45dc53db634574f4 226 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 226 37.806 T 01-11-2018 IPR022877 Protein of unknown funcion UPF0173 DOE78_18540 0e1719993c331fdc45dc53db634574f4 226 SMART SM00849 7 192 2.2E-14 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_18540 0e1719993c331fdc45dc53db634574f4 226 Pfam PF12706 Beta-lactamase superfamily domain 18 193 1.6E-24 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_18540 0e1719993c331fdc45dc53db634574f4 226 SUPERFAMILY SSF56281 1 210 3.14E-38 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_18540 0e1719993c331fdc45dc53db634574f4 226 Gene3D G3DSA:3.60.15.10 1 226 2.1E-74 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 539 2.9E-48 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 SUPERFAMILY SSF58104 255 586 1.96E-68 T 01-11-2018 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 Gene3D G3DSA:1.10.287.950 317 587 1.3E-64 T 01-11-2018 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 Pfam PF00672 HAMP domain 231 280 5.2E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 SMART SM00283 312 587 1.8E-81 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 25 50 7.0E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 437 7.0E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 439 468 7.0E-21 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 SMART SM00304 230 283 1.2E-9 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_12980 93d1314875e8fd0855ea68255d171fe3 588 Gene3D G3DSA:1.20.1480.50 184 290 2.0E-14 T 01-11-2018 DOE78_24080 fafdd9bcff863e258ae759288549c570 217 SUPERFAMILY SSF46689 16 80 3.85E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_24080 fafdd9bcff863e258ae759288549c570 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.6E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_24080 fafdd9bcff863e258ae759288549c570 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.6E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_24080 fafdd9bcff863e258ae759288549c570 217 SUPERFAMILY SSF48498 99 213 4.7E-12 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_24080 fafdd9bcff863e258ae759288549c570 217 Gene3D G3DSA:1.10.357.10 11 213 4.9E-38 T 01-11-2018 DOE78_24080 fafdd9bcff863e258ae759288549c570 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 3.2E-18 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_03525 7de006a79c7d1cccecd511fe002c4dec 177 PIRSF PIRSF007531 1 177 6.4E-38 T 01-11-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 DOE78_03525 7de006a79c7d1cccecd511fe002c4dec 177 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 3 162 8.6E-38 T 01-11-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 DOE78_03525 7de006a79c7d1cccecd511fe002c4dec 177 SUPERFAMILY SSF52540 1 162 1.13E-15 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03525 7de006a79c7d1cccecd511fe002c4dec 177 Gene3D G3DSA:3.40.50.300 1 164 2.2E-42 T 01-11-2018 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 01-11-2018 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 SUPERFAMILY SSF81886 571 826 3.01E-79 T 01-11-2018 IPR036266 SecA, Wing/Scaffold superfamily DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Gene3D G3DSA:1.10.1200.230 621 705 0.0 T 01-11-2018 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 01-11-2018 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 497 1.0E-240 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Gene3D G3DSA:3.10.450.50 773 837 7.1E-10 T 01-11-2018 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 ProSitePatterns PS01312 SecA family signature. 480 495 - T 01-11-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Gene3D G3DSA:1.10.3060.10 571 772 0.0 T 01-11-2018 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Pfam PF02810 SEC-C motif 818 835 3.3E-9 T 01-11-2018 IPR004027 SEC-C motif DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 781 19.672 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Pfam PF01043 SecA preprotein cross-linking domain 230 338 4.3E-42 T 01-11-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 SMART SM00958 226 338 3.4E-69 T 01-11-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 SUPERFAMILY SSF81767 225 348 4.32E-47 T 01-11-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 SMART SM00957 5 382 1.3E-283 T 01-11-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 SUPERFAMILY SSF52540 6 395 1.46E-84 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 SUPERFAMILY SSF52540 396 569 1.31E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 01-11-2018 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 PRINTS PR00906 SecA protein signature 393 406 5.2E-71 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 PRINTS PR00906 SecA protein signature 61 85 5.2E-71 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 PRINTS PR00906 SecA protein signature 168 188 5.2E-71 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 PRINTS PR00906 SecA protein signature 99 113 5.2E-71 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 PRINTS PR00906 SecA protein signature 115 125 5.2E-71 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 PRINTS PR00906 SecA protein signature 319 341 5.2E-71 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 PRINTS PR00906 SecA protein signature 356 373 5.2E-71 T 01-11-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Pfam PF07516 SecA Wing and Scaffold domain 568 778 9.7E-66 T 01-11-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DOE78_22750 4e70200869bfda17dec9b9712e3797bd 838 Pfam PF07517 SecA DEAD-like domain 6 382 1.2E-128 T 01-11-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 222 254 - T 01-11-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PIRSF PIRSF000099 1 421 9.0E-171 T 01-11-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 Gene3D G3DSA:3.40.50.1980 226 342 3.3E-128 T 01-11-2018 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 27 419 2.1E-170 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 Pfam PF00815 Histidinol dehydrogenase 20 420 3.9E-175 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 SUPERFAMILY SSF53720 21 420 1.51E-88 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 420 42.844 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 27 51 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 128 154 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 193 218 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 222 243 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 PRINTS PR00083 Histidinol dehydrogenase signature 163 189 7.8E-90 T 01-11-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DOE78_22185 eba4524463cc9087faf7a61d15882ef6 421 Gene3D G3DSA:3.40.50.1980 25 224 3.3E-128 T 01-11-2018 DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 SUPERFAMILY SSF55031 185 298 1.31E-29 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 Gene3D G3DSA:3.30.70.360 183 297 2.6E-146 T 01-11-2018 DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 SUPERFAMILY SSF53187 5 388 2.99E-87 T 01-11-2018 DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 PIRSF PIRSF005962 3 389 1.0E-130 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 Pfam PF07687 Peptidase dimerisation domain 188 279 1.0E-8 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 Pfam PF01546 Peptidase family M20/M25/M40 74 383 7.0E-30 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 Gene3D G3DSA:3.40.630.10 16 374 2.6E-146 T 01-11-2018 DOE78_05950 058d2e51d7bbef3e5623aa70110a2d31 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 377 9.9E-124 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 Gene3D G3DSA:1.10.10.160 244 321 6.2E-81 T 01-11-2018 IPR013986 DExx box DNA helicase domain superfamily DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 SUPERFAMILY SSF52540 137 760 1.63E-130 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 Gene3D G3DSA:3.40.50.300 141 405 6.2E-81 T 01-11-2018 DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 Gene3D G3DSA:1.10.486.10 515 668 2.6E-75 T 01-11-2018 DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 Pfam PF13361 UvrD-like helicase C-terminal domain 409 741 1.1E-42 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 Pfam PF00580 UvrD/REP helicase N-terminal domain 142 404 9.9E-62 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 Pfam PF06054 Competence protein CoiA-like family 6 72 3.7E-6 T 01-11-2018 IPR010330 Competence-induced protein CoiA-like DOE78_06755 36b7c63e21fc3656c89f58e653cc512b 762 Gene3D G3DSA:3.40.50.300 413 756 2.6E-75 T 01-11-2018 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 Gene3D G3DSA:3.20.20.80 1 484 1.9E-161 T 01-11-2018 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 314 328 2.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 421 438 2.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 446 458 2.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 379 387 2.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 400 411 2.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 379 387 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 Pfam PF00232 Glycosyl hydrolase family 1 3 481 1.7E-139 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 SUPERFAMILY SSF51445 5 482 8.89E-170 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_10300 5a29e904061f1c755aa9d66aa5b78697 484 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_08865 eedd5ef03c56b81de25bc82b0adc6c84 361 Pfam PF07470 Glycosyl Hydrolase Family 88 32 357 2.9E-89 T 01-11-2018 IPR010905 Glycosyl hydrolase, family 88 DOE78_08865 eedd5ef03c56b81de25bc82b0adc6c84 361 SUPERFAMILY SSF48208 13 357 3.97E-81 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_08865 eedd5ef03c56b81de25bc82b0adc6c84 361 Gene3D G3DSA:1.50.10.10 1 360 1.6E-136 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_13505 aaafe95300de1c4fa890d4cfc6f6311f 95 SUPERFAMILY SSF89360 1 93 5.23E-11 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DOE78_13505 aaafe95300de1c4fa890d4cfc6f6311f 95 PIRSF PIRSF034852 1 95 3.8E-36 T 01-11-2018 IPR008326 Uncharacterised conserved protein UCP034852 DOE78_07370 47ce11f9e37e396c6a674673fee0177d 99 Pfam PF11256 Protein of unknown function (DUF3055) 7 87 1.6E-33 T 01-11-2018 IPR021415 Protein of unknown function DUF3055 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 SUPERFAMILY SSF46785 435 504 5.17E-8 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Pfam PF00009 Elongation factor Tu GTP binding domain 4 170 7.8E-36 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Pfam PF03144 Elongation factor Tu domain 2 196 262 3.1E-9 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Pfam PF09106 Elongation factor SelB, winged helix 444 499 1.2E-5 T 01-11-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 133 1.9E-15 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Gene3D G3DSA:3.40.50.300 1 177 1.5E-49 T 01-11-2018 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 PRINTS PR00315 GTP-binding elongation factor signature 7 20 8.3E-9 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 PRINTS PR00315 GTP-binding elongation factor signature 75 86 8.3E-9 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 PRINTS PR00315 GTP-binding elongation factor signature 112 121 8.3E-9 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 PRINTS PR00315 GTP-binding elongation factor signature 59 69 8.3E-9 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 SUPERFAMILY SSF50447 180 274 1.54E-23 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 SUPERFAMILY SSF52540 2 197 1.49E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 SUPERFAMILY SSF50465 268 364 1.04E-24 T 01-11-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Gene3D G3DSA:2.40.30.10 178 295 3.3E-31 T 01-11-2018 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Gene3D G3DSA:1.10.10.10 570 626 3.0E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Gene3D G3DSA:1.10.10.2770 436 568 1.2E-20 T 01-11-2018 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 Pfam PF09107 Elongation factor SelB, winged helix 583 624 3.7E-15 T 01-11-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 7 625 8.5E-115 T 01-11-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 DOE78_13215 5681633a123c9e6a766a5ed034751c88 626 SUPERFAMILY SSF46785 580 624 1.18E-9 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10170 e85089298092f28945fb810b7f41a353 430 Gene3D G3DSA:1.10.8.1210 381 430 1.1E-16 T 01-11-2018 DOE78_10170 e85089298092f28945fb810b7f41a353 430 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 52 179 8.1E-55 T 01-11-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10170 e85089298092f28945fb810b7f41a353 430 Gene3D G3DSA:3.40.50.10860 49 184 1.8E-172 T 01-11-2018 DOE78_10170 e85089298092f28945fb810b7f41a353 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 108 122 6.1E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10170 e85089298092f28945fb810b7f41a353 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 356 367 6.1E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10170 e85089298092f28945fb810b7f41a353 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 188 210 6.1E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10170 e85089298092f28945fb810b7f41a353 430 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 230 250 6.1E-31 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10170 e85089298092f28945fb810b7f41a353 430 Gene3D G3DSA:3.40.50.720 204 357 1.8E-172 T 01-11-2018 DOE78_10170 e85089298092f28945fb810b7f41a353 430 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 116 129 - T 01-11-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10170 e85089298092f28945fb810b7f41a353 430 SUPERFAMILY SSF51735 197 429 1.0E-77 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_10170 e85089298092f28945fb810b7f41a353 430 PIRSF PIRSF000185 12 430 8.5E-171 T 01-11-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DOE78_10170 e85089298092f28945fb810b7f41a353 430 SMART SM00839 199 428 5.7E-96 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_10170 e85089298092f28945fb810b7f41a353 430 Gene3D G3DSA:1.10.8.1210 26 358 1.8E-172 T 01-11-2018 DOE78_10170 e85089298092f28945fb810b7f41a353 430 SUPERFAMILY SSF53223 21 199 3.2E-66 T 01-11-2018 DOE78_10170 e85089298092f28945fb810b7f41a353 430 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 197 428 4.5E-78 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.536 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 SUPERFAMILY SSF51735 2 122 4.73E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 7.1E-40 T 01-11-2018 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 7.1E-40 T 01-11-2018 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 7.1E-40 T 01-11-2018 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 7.1E-40 T 01-11-2018 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 01-11-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 PIRSF PIRSF001553 1 291 2.7E-134 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 SMART SM00881 4 100 2.1E-34 T 01-11-2018 IPR003781 CoA-binding GO:0048037 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 Pfam PF02629 CoA binding domain 6 99 5.8E-31 T 01-11-2018 IPR003781 CoA-binding GO:0048037 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 7.2E-148 T 01-11-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 Gene3D G3DSA:3.40.50.720 1 123 1.4E-51 T 01-11-2018 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 01-11-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 Pfam PF00549 CoA-ligase 151 262 2.5E-18 T 01-11-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 Gene3D G3DSA:3.40.50.261 124 289 5.2E-72 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DOE78_08110 33f16de8e39402c4c3765c6e67ff3689 300 SUPERFAMILY SSF52210 123 287 5.36E-55 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DOE78_12415 0b382435aec308067bfafdb64a4d6dcf 99 SUPERFAMILY SSF89360 1 93 2.75E-9 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DOE78_12415 0b382435aec308067bfafdb64a4d6dcf 99 Gene3D G3DSA:2.60.300.12 1 98 1.5E-9 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 01-11-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 Gene3D G3DSA:3.20.20.70 1 336 9.6E-109 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 Pfam PF04055 Radical SAM superfamily 18 182 1.6E-29 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 336 5.5E-121 T 01-11-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 SUPERFAMILY SSF102114 6 309 9.29E-79 T 01-11-2018 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 336 41.398 T 01-11-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 Pfam PF06463 Molybdenum Cofactor Synthesis C 189 315 2.1E-37 T 01-11-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 SMART SM00729 13 221 4.7E-16 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_06435 fd31908898fab3c1e17d937699c03be2 336 Pfam PF13353 4Fe-4S single cluster domain 20 127 1.0E-6 T 01-11-2018 DOE78_22420 832f861baa50d9920841624f5db74f18 370 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 17 364 5.2E-13 T 01-11-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DOE78_22420 832f861baa50d9920841624f5db74f18 370 Gene3D G3DSA:3.20.20.210 8 370 4.4E-128 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_22420 832f861baa50d9920841624f5db74f18 370 SUPERFAMILY SSF51726 15 370 5.49E-82 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_15815 5911575542869a795749f9a2cd96db6f 380 Pfam PF02926 THUMP domain 17 155 1.2E-17 T 01-11-2018 IPR004114 THUMP domain GO:0003723 DOE78_15815 5911575542869a795749f9a2cd96db6f 380 Gene3D G3DSA:3.40.50.150 161 366 1.4E-125 T 01-11-2018 DOE78_15815 5911575542869a795749f9a2cd96db6f 380 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 01-11-2018 IPR000241 Putative RNA methylase domain DOE78_15815 5911575542869a795749f9a2cd96db6f 380 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DOE78_15815 5911575542869a795749f9a2cd96db6f 380 SMART SM00981 57 155 8.5E-10 T 01-11-2018 IPR004114 THUMP domain GO:0003723 DOE78_15815 5911575542869a795749f9a2cd96db6f 380 Gene3D G3DSA:3.30.2130.30 8 246 1.4E-125 T 01-11-2018 DOE78_15815 5911575542869a795749f9a2cd96db6f 380 Pfam PF01170 Putative RNA methylase family UPF0020 163 367 1.5E-64 T 01-11-2018 IPR000241 Putative RNA methylase domain DOE78_15815 5911575542869a795749f9a2cd96db6f 380 SUPERFAMILY SSF53335 143 361 1.88E-37 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_14720 81c47fb966368c295d4a352886693591 722 Pfam PF00384 Molybdopterin oxidoreductase 77 510 1.7E-86 T 01-11-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_14720 81c47fb966368c295d4a352886693591 722 Gene3D G3DSA:3.40.50.740 93 559 7.7E-166 T 01-11-2018 DOE78_14720 81c47fb966368c295d4a352886693591 722 SUPERFAMILY SSF50692 569 715 2.1E-45 T 01-11-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DOE78_14720 81c47fb966368c295d4a352886693591 722 Pfam PF01568 Molydopterin dinucleotide binding domain 603 710 6.3E-29 T 01-11-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DOE78_14720 81c47fb966368c295d4a352886693591 722 SUPERFAMILY SSF53706 15 605 4.19E-183 T 01-11-2018 DOE78_14720 81c47fb966368c295d4a352886693591 722 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 455 472 - T 01-11-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DOE78_14720 81c47fb966368c295d4a352886693591 722 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 23 41 - T 01-11-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DOE78_14720 81c47fb966368c295d4a352886693591 722 Gene3D G3DSA:2.20.25.90 19 74 2.0E-12 T 01-11-2018 DOE78_14720 81c47fb966368c295d4a352886693591 722 SMART SM00926 18 74 2.2E-12 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_14720 81c47fb966368c295d4a352886693591 722 Gene3D G3DSA:2.40.40.20 593 716 2.2E-40 T 01-11-2018 DOE78_14720 81c47fb966368c295d4a352886693591 722 Gene3D G3DSA:3.40.228.10 162 362 7.7E-166 T 01-11-2018 DOE78_14720 81c47fb966368c295d4a352886693591 722 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 18 74 1.4E-13 T 01-11-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_14560 5bb367f9b6f7d71a7ae9c7891a385ef5 489 PIRSF PIRSF000484 5 482 2.6E-150 T 01-11-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DOE78_14560 5bb367f9b6f7d71a7ae9c7891a385ef5 489 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 467 2.9E-181 T 01-11-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 DOE78_14560 5bb367f9b6f7d71a7ae9c7891a385ef5 489 Gene3D G3DSA:3.20.140.10 12 472 3.4E-206 T 01-11-2018 DOE78_14560 5bb367f9b6f7d71a7ae9c7891a385ef5 489 Gene3D G3DSA:3.20.20.70 153 320 3.4E-206 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_14560 5bb367f9b6f7d71a7ae9c7891a385ef5 489 SUPERFAMILY SSF54675 5 140 2.35E-52 T 01-11-2018 DOE78_14560 5bb367f9b6f7d71a7ae9c7891a385ef5 489 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 158 338 2.9E-11 T 01-11-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DOE78_14560 5bb367f9b6f7d71a7ae9c7891a385ef5 489 SUPERFAMILY SSF51690 141 480 1.56E-130 T 01-11-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 SUPERFAMILY SSF51445 11 454 1.14E-161 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 Gene3D G3DSA:3.20.20.80 2 456 3.2E-155 T 01-11-2018 DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 384 4.6E-15 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 352 360 4.6E-15 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 411 4.6E-15 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 418 430 4.6E-15 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 4.6E-15 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 352 360 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_21455 3aadb13c22e47aee27459f1a889177fe 456 Pfam PF00232 Glycosyl hydrolase family 1 9 453 6.3E-142 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22760 407970dde884d92ce813daa229f2baa8 311 Gene3D G3DSA:3.40.50.2300 143 279 5.1E-94 T 01-11-2018 DOE78_22760 407970dde884d92ce813daa229f2baa8 311 SUPERFAMILY SSF53822 36 310 6.1E-91 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_22760 407970dde884d92ce813daa229f2baa8 311 Gene3D G3DSA:3.40.50.2300 48 299 5.1E-94 T 01-11-2018 DOE78_22760 407970dde884d92ce813daa229f2baa8 311 Pfam PF13407 Periplasmic binding protein domain 45 297 9.8E-68 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_02495 114b25273588b99ef7fc4e18b1269a2a 65 Gene3D G3DSA:1.20.58.990 7 59 3.9E-12 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_02495 114b25273588b99ef7fc4e18b1269a2a 65 Pfam PF09388 Spo0E like sporulation regulatory protein 10 50 1.5E-11 T 01-11-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DOE78_02495 114b25273588b99ef7fc4e18b1269a2a 65 SUPERFAMILY SSF140500 10 52 2.62E-12 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_16190 46e3275173de4d883b11eb44255a0ddd 450 Pfam PF14620 YpeB sporulation 14 373 2.0E-135 T 01-11-2018 IPR014239 Spore germination YpeB GO:0009847 DOE78_16190 46e3275173de4d883b11eb44255a0ddd 450 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 439 6.3E-145 T 01-11-2018 IPR014239 Spore germination YpeB GO:0009847 DOE78_10340 8052821456a628db55864642f60ac6e7 133 Pfam PF07070 SpoOM protein 11 128 8.1E-13 T 01-11-2018 IPR009776 Sporulation stage 0, protein M DOE78_13450 c34d60e83b3ac87bc9942a64a335cf4e 49 Pfam PF08175 Small acid-soluble spore protein O family 2 49 3.8E-22 T 01-11-2018 DOE78_13450 c34d60e83b3ac87bc9942a64a335cf4e 49 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 1 49 5.2E-24 T 01-11-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 DOE78_13450 c34d60e83b3ac87bc9942a64a335cf4e 49 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 3 38 4.0E-11 T 01-11-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 DOE78_21275 ee809296af9529b861239cd98ae87af3 285 Gene3D G3DSA:3.40.630.30 1 166 4.5E-21 T 01-11-2018 DOE78_21275 ee809296af9529b861239cd98ae87af3 285 Pfam PF13527 Acetyltransferase (GNAT) domain 17 127 1.8E-11 T 01-11-2018 DOE78_21275 ee809296af9529b861239cd98ae87af3 285 SUPERFAMILY SSF55729 16 222 4.9E-28 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_03725 c5e36f0a399e654dec8a3dd55d7f9ae9 340 Pfam PF01032 FecCD transport family 23 338 4.0E-95 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_03725 c5e36f0a399e654dec8a3dd55d7f9ae9 340 Gene3D G3DSA:1.10.3470.10 8 340 5.1E-99 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_03725 c5e36f0a399e654dec8a3dd55d7f9ae9 340 SUPERFAMILY SSF81345 6 338 9.02E-86 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_15035 f103980e9fa56fe644d85767ee3dd2ca 265 Gene3D G3DSA:3.60.15.10 2 260 2.5E-40 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_15035 f103980e9fa56fe644d85767ee3dd2ca 265 SMART SM00849 21 233 9.5E-31 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_15035 f103980e9fa56fe644d85767ee3dd2ca 265 Pfam PF00753 Metallo-beta-lactamase superfamily 22 233 4.3E-31 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_15035 f103980e9fa56fe644d85767ee3dd2ca 265 SUPERFAMILY SSF56281 9 242 4.19E-41 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 Gene3D G3DSA:1.20.1080.10 3 237 5.5E-67 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 Pfam PF00230 Major intrinsic protein 3 232 3.6E-41 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 PRINTS PR00783 Major intrinsic protein family signature 8 27 1.5E-39 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 PRINTS PR00783 Major intrinsic protein family signature 172 194 1.5E-39 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 PRINTS PR00783 Major intrinsic protein family signature 215 235 1.5E-39 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 PRINTS PR00783 Major intrinsic protein family signature 141 159 1.5E-39 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 PRINTS PR00783 Major intrinsic protein family signature 91 110 1.5E-39 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 PRINTS PR00783 Major intrinsic protein family signature 54 78 1.5E-39 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 ProSitePatterns PS00221 MIP family signature. 72 80 - T 01-11-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DOE78_11720 3a42fdb5fee6ae9c9059e873a1009326 254 SUPERFAMILY SSF81338 3 236 1.57E-58 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DOE78_11645 bfcc5b0e68fdefb5332d6dc2ed1e04fd 546 Pfam PF12833 Helix-turn-helix domain 460 538 1.6E-17 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11645 bfcc5b0e68fdefb5332d6dc2ed1e04fd 546 Gene3D G3DSA:1.10.10.60 488 542 1.5E-15 T 01-11-2018 DOE78_11645 bfcc5b0e68fdefb5332d6dc2ed1e04fd 546 SUPERFAMILY SSF46689 437 487 1.08E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11645 bfcc5b0e68fdefb5332d6dc2ed1e04fd 546 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 491 533 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_11645 bfcc5b0e68fdefb5332d6dc2ed1e04fd 546 SUPERFAMILY SSF46689 490 540 2.24E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11645 bfcc5b0e68fdefb5332d6dc2ed1e04fd 546 Gene3D G3DSA:1.10.10.60 435 487 5.6E-18 T 01-11-2018 DOE78_11645 bfcc5b0e68fdefb5332d6dc2ed1e04fd 546 SMART SM00342 454 537 1.4E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 SUPERFAMILY SSF53901 3 269 2.43E-75 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.6E-87 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 Pfam PF02803 Thiolase, C-terminal domain 270 391 5.6E-51 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 Gene3D G3DSA:3.40.47.10 6 276 2.5E-148 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 Gene3D G3DSA:3.40.47.10 127 390 2.5E-148 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 7.1E-142 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 SUPERFAMILY SSF53901 271 391 7.92E-47 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DOE78_10040 98e931dd802b86a2112bc2ebe48006e5 393 PIRSF PIRSF000429 1 393 4.8E-127 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_24280 bddec8d9f95076e60fe38c0958eb74cc 240 Pfam PF01478 Type IV leader peptidase family 94 197 4.5E-18 T 01-11-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 DOE78_24280 bddec8d9f95076e60fe38c0958eb74cc 240 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 2 81 4.5E-29 T 01-11-2018 IPR010627 Peptidase A24A, N-terminal DOE78_24280 bddec8d9f95076e60fe38c0958eb74cc 240 Gene3D G3DSA:1.20.120.1220 85 235 7.3E-6 T 01-11-2018 DOE78_16865 17850c1dda640bca2e59ab5433b27b14 132 Gene3D G3DSA:1.10.940.10 1 132 5.9E-48 T 01-11-2018 IPR035926 NusB-like superfamily DOE78_16865 17850c1dda640bca2e59ab5433b27b14 132 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 130 25.186 T 01-11-2018 IPR011605 NusB antitermination factor GO:0006353 DOE78_16865 17850c1dda640bca2e59ab5433b27b14 132 SUPERFAMILY SSF48013 2 128 5.89E-41 T 01-11-2018 IPR035926 NusB-like superfamily DOE78_16865 17850c1dda640bca2e59ab5433b27b14 132 Pfam PF01029 NusB family 4 126 2.6E-39 T 01-11-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DOE78_16865 17850c1dda640bca2e59ab5433b27b14 132 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 128 2.1E-44 T 01-11-2018 IPR011605 NusB antitermination factor GO:0006353 DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 Gene3D G3DSA:1.10.10.10 8 72 3.0E-13 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 SUPERFAMILY SSF46785 5 75 6.34E-11 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 SUPERFAMILY SSF48008 77 212 1.99E-23 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 SMART SM00345 13 71 2.1E-7 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 Gene3D G3DSA:1.20.120.530 75 220 7.1E-26 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 SMART SM00895 81 205 1.1E-12 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 Pfam PF07729 FCD domain 81 204 3.5E-21 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_12085 17b2f60dbf8c0175098a757f0e4c7a0c 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 69 2.0E-11 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_08875 dcbd9570622cfe2a20f5dc00b90cfd6d 436 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 225 8.5E-24 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_08875 dcbd9570622cfe2a20f5dc00b90cfd6d 436 SUPERFAMILY SSF51735 3 160 8.07E-31 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08875 dcbd9570622cfe2a20f5dc00b90cfd6d 436 Gene3D G3DSA:3.40.50.720 2 131 4.9E-17 T 01-11-2018 DOE78_08875 dcbd9570622cfe2a20f5dc00b90cfd6d 436 SUPERFAMILY SSF55347 134 357 8.07E-32 T 01-11-2018 DOE78_08875 dcbd9570622cfe2a20f5dc00b90cfd6d 436 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 128 2.6E-16 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_12855 221a2e0308860b0c4c5ec46827e76fd9 1546 SUPERFAMILY SSF74853 103 189 2.22E-8 T 01-11-2018 IPR036415 Lamin tail domain superfamily DOE78_12855 221a2e0308860b0c4c5ec46827e76fd9 1546 Pfam PF00932 Lamin Tail Domain 109 234 2.8E-12 T 01-11-2018 IPR001322 Lamin tail domain DOE78_12855 221a2e0308860b0c4c5ec46827e76fd9 1546 Pfam PF00932 Lamin Tail Domain 403 506 2.1E-10 T 01-11-2018 IPR001322 Lamin tail domain DOE78_12855 221a2e0308860b0c4c5ec46827e76fd9 1546 SUPERFAMILY SSF74853 391 476 2.49E-6 T 01-11-2018 IPR036415 Lamin tail domain superfamily DOE78_12855 221a2e0308860b0c4c5ec46827e76fd9 1546 Gene3D G3DSA:2.60.40.10 898 990 5.1E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_12855 221a2e0308860b0c4c5ec46827e76fd9 1546 SUPERFAMILY SSF56300 1178 1426 8.26E-26 T 01-11-2018 DOE78_12855 221a2e0308860b0c4c5ec46827e76fd9 1546 Gene3D G3DSA:3.60.21.10 1178 1397 5.6E-16 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_21480 a12e0a1707f3ac9845daa1d01db6b057 481 Pfam PF00367 phosphotransferase system, EIIB 408 439 5.8E-13 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_21480 a12e0a1707f3ac9845daa1d01db6b057 481 Gene3D G3DSA:3.30.1360.60 400 481 3.4E-23 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_21480 a12e0a1707f3ac9845daa1d01db6b057 481 Pfam PF02378 Phosphotransferase system, EIIC 10 315 3.9E-78 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_21480 a12e0a1707f3ac9845daa1d01db6b057 481 SUPERFAMILY SSF55604 404 477 4.84E-19 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_21480 a12e0a1707f3ac9845daa1d01db6b057 481 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 2 474 4.7E-200 T 01-11-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 DOE78_21480 a12e0a1707f3ac9845daa1d01db6b057 481 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_21480 a12e0a1707f3ac9845daa1d01db6b057 481 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 374 464 9.8E-20 T 01-11-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DOE78_15840 24169671e79d1b47fabd203996f103c9 420 SUPERFAMILY SSF53098 82 276 9.99E-28 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_15840 24169671e79d1b47fabd203996f103c9 420 Pfam PF13482 RNase_H superfamily 105 273 2.1E-35 T 01-11-2018 IPR038720 YprB, ribonuclease H-like domain DOE78_13260 5adcbf5ac448b17b8d31bae9475dee42 488 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 5 486 70.937 T 01-11-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 DOE78_13260 5adcbf5ac448b17b8d31bae9475dee42 488 Gene3D G3DSA:3.40.309.10 256 455 5.3E-152 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_13260 5adcbf5ac448b17b8d31bae9475dee42 488 SUPERFAMILY SSF53720 4 485 1.7E-151 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_13260 5adcbf5ac448b17b8d31bae9475dee42 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DOE78_13260 5adcbf5ac448b17b8d31bae9475dee42 488 Pfam PF00171 Aldehyde dehydrogenase family 19 481 2.7E-147 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_13260 5adcbf5ac448b17b8d31bae9475dee42 488 Gene3D G3DSA:3.40.605.10 28 463 5.3E-152 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_13260 5adcbf5ac448b17b8d31bae9475dee42 488 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 12 486 1.0E-190 T 01-11-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DOE78_11400 124e0fc8662af0b02d999bd259aa0161 195 Pfam PF00027 Cyclic nucleotide-binding domain 31 105 1.1E-8 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_11400 124e0fc8662af0b02d999bd259aa0161 195 Gene3D G3DSA:2.60.120.10 1 142 6.0E-29 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_11400 124e0fc8662af0b02d999bd259aa0161 195 SUPERFAMILY SSF51206 6 143 6.94E-20 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 375 37.557 T 01-11-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 Gene3D G3DSA:3.40.50.720 2 202 2.2E-68 T 01-11-2018 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 3.7E-13 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 PRINTS PR00084 Mannitol dehydrogenase signature 152 165 3.7E-13 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 3.7E-13 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 PRINTS PR00084 Mannitol dehydrogenase signature 116 129 3.7E-13 T 01-11-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 152 164 - T 01-11-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 SUPERFAMILY SSF48179 202 378 3.4E-40 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 367 1.1E-43 T 01-11-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 Gene3D G3DSA:1.10.1040.10 204 379 5.1E-62 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 3.5E-25 T 01-11-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_20150 13c759c0c98c0c19758fc66e80b5714e 380 SUPERFAMILY SSF51735 4 189 2.36E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 SUPERFAMILY SSF103473 14 473 1.24E-60 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 441 1.2E-97 T 01-11-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 Gene3D G3DSA:1.20.1250.20 263 476 4.6E-21 T 01-11-2018 DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 336 356 2.1E-6 T 01-11-2018 DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 2.1E-6 T 01-11-2018 DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 2.1E-6 T 01-11-2018 DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 80 102 2.1E-6 T 01-11-2018 DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 Pfam PF07690 Major Facilitator Superfamily 22 413 2.6E-47 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_22410 21b0de7d50ccc59b53f0bf57bc673871 480 Gene3D G3DSA:1.20.1720.10 17 230 1.0E-37 T 01-11-2018 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 Gene3D G3DSA:1.10.1660.10 2 133 1.7E-37 T 01-11-2018 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 SMART SM00422 4 73 2.9E-23 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 5.0E-7 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 5.0E-7 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 5.0E-7 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 Pfam PF13411 MerR HTH family regulatory protein 4 70 4.7E-20 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02740 d2a95dfc21822d3784f47c29f3c434b3 135 SUPERFAMILY SSF46955 4 120 4.4E-33 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_06025 f64173d2220b1ca8058710c0aec0b6b3 347 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DOE78_06025 f64173d2220b1ca8058710c0aec0b6b3 347 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 340 1.3E-128 T 01-11-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DOE78_06025 f64173d2220b1ca8058710c0aec0b6b3 347 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 342 47.774 T 01-11-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DOE78_06025 f64173d2220b1ca8058710c0aec0b6b3 347 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 341 1.7E-123 T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DOE78_06025 f64173d2220b1ca8058710c0aec0b6b3 347 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DOE78_06025 f64173d2220b1ca8058710c0aec0b6b3 347 SUPERFAMILY SSF51726 4 342 4.45E-103 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_06025 f64173d2220b1ca8058710c0aec0b6b3 347 Gene3D G3DSA:3.20.20.210 1 347 2.1E-147 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 Gene3D G3DSA:2.40.100.10 182 238 1.5E-14 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 PIRSF PIRSF001467 186 238 3.5E-11 T 01-11-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 PIRSF PIRSF001467 43 170 2.0E-43 T 01-11-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 Gene3D G3DSA:2.40.100.10 18 180 4.9E-50 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 SUPERFAMILY SSF50891 59 237 2.05E-61 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 94 111 - T 01-11-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 60 235 5.6E-52 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 111 2.4E-17 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 88 2.4E-17 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_20815 64fa68b86b33b4fa8ba98845c4131766 238 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 2.4E-17 T 01-11-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 SUPERFAMILY SSF90123 35 348 3.66E-76 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 Gene3D G3DSA:1.20.1560.10 18 351 1.4E-88 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 Pfam PF00664 ABC transporter transmembrane region 50 316 4.9E-44 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 SMART SM00382 391 577 1.4E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 Pfam PF00005 ABC transporter 382 531 6.1E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 SUPERFAMILY SSF52540 356 602 5.22E-92 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07305 4f2b4afb3f7deb2a0ebc0fb95be2771d 608 Gene3D G3DSA:3.40.50.300 362 607 3.2E-94 T 01-11-2018 DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 Gene3D G3DSA:3.40.50.1820 7 269 9.2E-59 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 Pfam PF00561 alpha/beta hydrolase fold 20 253 1.8E-21 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 267 34.308 T 01-11-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 4.8E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 4.8E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 4.8E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 SUPERFAMILY SSF53474 3 267 2.43E-51 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_19600 4c7f37fbb7b2050e11f65c37582124ee 272 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 20 266 1.6E-84 T 01-11-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DOE78_15495 5d10ae8e96e84bb81e69a190faedf0aa 272 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 49 240 1.1E-29 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain DOE78_15495 5d10ae8e96e84bb81e69a190faedf0aa 272 Gene3D G3DSA:3.40.50.1110 9 251 3.8E-38 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_15495 5d10ae8e96e84bb81e69a190faedf0aa 272 SUPERFAMILY SSF52266 41 249 2.82E-37 T 01-11-2018 DOE78_01920 8a1e9723984c59887203caa2e23d8ec1 389 Pfam PF07537 CamS sex pheromone cAM373 precursor 57 382 3.6E-125 T 01-11-2018 IPR011426 CamS sex pheromone cAM373 DOE78_01920 8a1e9723984c59887203caa2e23d8ec1 389 Gene3D G3DSA:3.10.570.10 54 389 4.2E-135 T 01-11-2018 DOE78_01920 8a1e9723984c59887203caa2e23d8ec1 389 PIRSF PIRSF012509 1 389 4.6E-152 T 01-11-2018 IPR011426 CamS sex pheromone cAM373 DOE78_07665 be89af02dcf5cb6b1d4cbb4ff326bcc8 544 PIRSF PIRSF012535 1 544 5.7E-180 T 01-11-2018 IPR011199 Bacillithiol biosynthesis BshC DOE78_07665 be89af02dcf5cb6b1d4cbb4ff326bcc8 544 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 544 30.363 T 01-11-2018 IPR011199 Bacillithiol biosynthesis BshC DOE78_07665 be89af02dcf5cb6b1d4cbb4ff326bcc8 544 Pfam PF10079 Bacillithiol biosynthesis BshC 1 541 2.2E-170 T 01-11-2018 IPR011199 Bacillithiol biosynthesis BshC DOE78_07665 be89af02dcf5cb6b1d4cbb4ff326bcc8 544 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 11 542 1.4E-174 T 01-11-2018 IPR011199 Bacillithiol biosynthesis BshC DOE78_08070 5ca4f7a4263f61a79b4d24690133b736 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 238 1.2E-103 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DOE78_08070 5ca4f7a4263f61a79b4d24690133b736 248 Gene3D G3DSA:3.40.1280.10 1 168 1.3E-69 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE78_08070 5ca4f7a4263f61a79b4d24690133b736 248 SUPERFAMILY SSF75217 2 246 7.33E-102 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases DOE78_08070 5ca4f7a4263f61a79b4d24690133b736 248 PIRSF PIRSF000386 2 248 3.5E-106 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DOE78_08070 5ca4f7a4263f61a79b4d24690133b736 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 224 2.8E-73 T 01-11-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DOE78_08070 5ca4f7a4263f61a79b4d24690133b736 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 113.517 T 01-11-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DOE78_08070 5ca4f7a4263f61a79b4d24690133b736 248 Gene3D G3DSA:1.10.1270.20 169 248 5.6E-34 T 01-11-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DOE78_22145 c7e4a187c19996040198771ad1a18cdf 152 Pfam PF00293 NUDIX domain 5 123 4.0E-19 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_22145 c7e4a187c19996040198771ad1a18cdf 152 Gene3D G3DSA:3.90.79.10 1 152 2.3E-43 T 01-11-2018 DOE78_22145 c7e4a187c19996040198771ad1a18cdf 152 SUPERFAMILY SSF55811 4 131 3.11E-28 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_22145 c7e4a187c19996040198771ad1a18cdf 152 PRINTS PR00502 NUDIX hydrolase family signature 26 40 1.4E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_22145 c7e4a187c19996040198771ad1a18cdf 152 PRINTS PR00502 NUDIX hydrolase family signature 40 55 1.4E-5 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 SUPERFAMILY SSF52540 3 226 3.31E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 Pfam PF00005 ABC transporter 21 169 6.0E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 Pfam PF00005 ABC transporter 273 429 1.0E-16 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 SMART SM00382 29 218 1.4E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 SUPERFAMILY SSF52540 256 490 8.15E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 Gene3D G3DSA:3.40.50.300 251 495 5.7E-40 T 01-11-2018 DOE78_08495 3e024e7683df9d76ff56e7c4000ac03e 511 Gene3D G3DSA:3.40.50.300 1 235 3.5E-54 T 01-11-2018 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 SUPERFAMILY SSF58104 343 439 3.66E-10 T 01-11-2018 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 SUPERFAMILY SSF58104 411 679 3.14E-66 T 01-11-2018 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 Gene3D G3DSA:3.30.450.20 58 293 3.8E-42 T 01-11-2018 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 SUPERFAMILY SSF103190 89 206 1.71E-5 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 Gene3D G3DSA:3.30.450.20 64 199 3.8E-42 T 01-11-2018 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 Gene3D G3DSA:1.10.287.950 322 680 3.7E-67 T 01-11-2018 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 Pfam PF02743 Cache domain 46 286 3.2E-28 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 SMART SM00304 323 375 3.0E-4 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 632 8.6E-46 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10890 2d8108a14dc8d7751dfe933751fcae4e 680 SMART SM00283 383 679 6.4E-81 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_23110 47ffa1b0a1455693f6ae549bdf97e5a0 359 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 347 1.1E-169 T 01-11-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 DOE78_23110 47ffa1b0a1455693f6ae549bdf97e5a0 359 Gene3D G3DSA:3.90.25.10 196 345 7.4E-164 T 01-11-2018 DOE78_23110 47ffa1b0a1455693f6ae549bdf97e5a0 359 Gene3D G3DSA:3.40.50.720 4 331 7.4E-164 T 01-11-2018 DOE78_23110 47ffa1b0a1455693f6ae549bdf97e5a0 359 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 350 54.508 T 01-11-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 DOE78_23110 47ffa1b0a1455693f6ae549bdf97e5a0 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 340 3.2E-151 T 01-11-2018 IPR016040 NAD(P)-binding domain DOE78_23110 47ffa1b0a1455693f6ae549bdf97e5a0 359 SUPERFAMILY SSF51735 2 345 2.03E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21335 ba19cb396e27ba7ed859ef9a9929373f 202 PIRSF PIRSF006135 6 190 5.5E-45 T 01-11-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DOE78_21335 ba19cb396e27ba7ed859ef9a9929373f 202 SUPERFAMILY SSF52540 7 188 9.14E-36 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21335 ba19cb396e27ba7ed859ef9a9929373f 202 Gene3D G3DSA:3.40.50.300 7 188 1.6E-48 T 01-11-2018 DOE78_21335 ba19cb396e27ba7ed859ef9a9929373f 202 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 8 185 2.6E-43 T 01-11-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 Gene3D G3DSA:3.40.50.1980 141 216 6.5E-12 T 01-11-2018 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 Gene3D G3DSA:3.40.50.1980 23 140 1.8E-35 T 01-11-2018 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 PRINTS PR00690 Adhesin family signature 78 95 2.5E-6 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 PRINTS PR00690 Adhesin family signature 34 52 2.5E-6 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 PRINTS PR00690 Adhesin family signature 65 78 2.5E-6 T 01-11-2018 IPR006128 Adhesion lipoprotein GO:0007155 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 SUPERFAMILY SSF53807 33 332 2.55E-78 T 01-11-2018 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 Gene3D G3DSA:3.40.50.1980 221 334 7.9E-39 T 01-11-2018 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 PRINTS PR00691 Adhesin B signature 34 55 8.0E-7 T 01-11-2018 IPR006129 Adhesin B GO:0007155 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 PRINTS PR00691 Adhesin B signature 78 97 8.0E-7 T 01-11-2018 IPR006129 Adhesin B GO:0007155 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 PRINTS PR00691 Adhesin B signature 59 77 8.0E-7 T 01-11-2018 IPR006129 Adhesin B GO:0007155 DOE78_19560 a87192a0623f801dca0579c12901a9c4 334 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 331 1.2E-69 T 01-11-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 Gene3D G3DSA:2.60.120.560 641 789 2.9E-141 T 01-11-2018 DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 SUPERFAMILY SSF49899 53 279 4.41E-32 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 Gene3D G3DSA:2.60.120.200 53 281 7.9E-33 T 01-11-2018 DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 635 788 1.7E-29 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 SUPERFAMILY SSF75005 301 631 2.83E-80 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 102 274 2.0E-20 T 01-11-2018 DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 SMART SM00640 310 753 3.3E-110 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 Gene3D G3DSA:2.115.10.20 317 790 2.9E-141 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 SMART SM00560 120 271 5.1E-16 T 01-11-2018 IPR006558 LamG-like jellyroll fold DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 310 628 3.7E-70 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_13710 3f53a61477aa6b0188be304dc3849409 797 SUPERFAMILY SSF49899 632 791 1.74E-27 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_21195 323ddd15b33c02b93876c42b0c6f29f3 120 Pfam PF03960 ArsC family 6 115 6.9E-17 T 01-11-2018 IPR006660 Arsenate reductase-like DOE78_21195 323ddd15b33c02b93876c42b0c6f29f3 120 Gene3D G3DSA:3.40.30.10 1 117 8.7E-48 T 01-11-2018 DOE78_21195 323ddd15b33c02b93876c42b0c6f29f3 120 SUPERFAMILY SSF52833 3 117 2.17E-37 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_21195 323ddd15b33c02b93876c42b0c6f29f3 120 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 3.9E-35 T 01-11-2018 IPR006504 Transcriptional regulator Spx/MgsR DOE78_09160 8f17a7b85618cc4a35e3102fdfae0fe7 324 Gene3D G3DSA:3.10.180.10 10 145 3.4E-34 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_09160 8f17a7b85618cc4a35e3102fdfae0fe7 324 Gene3D G3DSA:3.10.180.10 155 323 6.6E-42 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_09160 8f17a7b85618cc4a35e3102fdfae0fe7 324 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 251 272 - T 01-11-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 DOE78_09160 8f17a7b85618cc4a35e3102fdfae0fe7 324 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 273 9.9E-20 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_09160 8f17a7b85618cc4a35e3102fdfae0fe7 324 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 122 4.0E-7 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_09160 8f17a7b85618cc4a35e3102fdfae0fe7 324 SUPERFAMILY SSF54593 7 276 5.65E-38 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 SUPERFAMILY SSF53223 3 101 7.48E-34 T 01-11-2018 DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 274 1.6E-87 T 01-11-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 192 1.3E-11 T 01-11-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 Gene3D G3DSA:3.40.50.10860 5 260 1.4E-91 T 01-11-2018 DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 SUPERFAMILY SSF51735 102 273 2.47E-42 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 Gene3D G3DSA:3.40.50.720 101 240 1.4E-91 T 01-11-2018 DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 272 34.118 T 01-11-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DOE78_17585 a7201954312bed31e15a2a07d0674e22 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 6.9E-28 T 01-11-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DOE78_12940 4892689b5923f02fef1cbbdab4b3bd17 152 Pfam PF05163 DinB family 6 151 1.2E-14 T 01-11-2018 IPR007837 DNA damage-inducible protein DinB DOE78_12940 4892689b5923f02fef1cbbdab4b3bd17 152 SUPERFAMILY SSF109854 7 147 3.48E-18 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_12940 4892689b5923f02fef1cbbdab4b3bd17 152 Gene3D G3DSA:1.20.120.450 1 149 2.4E-28 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 8.5E-234 T 01-11-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 SMART SM01350 178 468 9.5E-236 T 01-11-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 9.8E-139 T 01-11-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 PIRSF PIRSF000109 1 468 3.0E-247 T 01-11-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 Gene3D G3DSA:3.40.50.720 1 179 2.4E-56 T 01-11-2018 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 SUPERFAMILY SSF48179 176 467 2.19E-135 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 01-11-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 168 8.7E-52 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 Gene3D G3DSA:1.10.1040.10 180 435 2.8E-114 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 SUPERFAMILY SSF51735 4 176 2.99E-54 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 Gene3D G3DSA:1.20.5.320 436 468 3.3E-21 T 01-11-2018 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 2.5E-87 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 2.5E-87 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 2.5E-87 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 2.5E-87 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 2.5E-87 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_16690 33856fc6f862ad889fbe6fb55c95910b 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.5E-87 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_21730 b05b26cb99734c09303f06255d0478b4 299 SUPERFAMILY SSF161098 59 288 6.67E-59 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21730 b05b26cb99734c09303f06255d0478b4 299 Gene3D G3DSA:1.10.3720.10 55 298 2.5E-68 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21730 b05b26cb99734c09303f06255d0478b4 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 293 6.7E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_19845 e7b69ba21962c525ffb66a8b0d39baa6 390 Gene3D G3DSA:3.40.50.2300 115 360 3.6E-59 T 01-11-2018 DOE78_19845 e7b69ba21962c525ffb66a8b0d39baa6 390 SUPERFAMILY SSF53822 90 369 5.26E-50 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_19845 e7b69ba21962c525ffb66a8b0d39baa6 390 Pfam PF13407 Periplasmic binding protein domain 94 338 1.5E-41 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_19845 e7b69ba21962c525ffb66a8b0d39baa6 390 Gene3D G3DSA:3.40.50.2300 198 334 3.6E-59 T 01-11-2018 DOE78_09395 38609f62de0865ba170348a0a348bf78 112 Gene3D G3DSA:3.40.190.10 20 64 2.1E-7 T 01-11-2018 DOE78_09395 38609f62de0865ba170348a0a348bf78 112 Pfam PF03466 LysR substrate binding domain 22 91 7.5E-10 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_09395 38609f62de0865ba170348a0a348bf78 112 SUPERFAMILY SSF53850 14 93 6.52E-9 T 01-11-2018 DOE78_09395 38609f62de0865ba170348a0a348bf78 112 Gene3D G3DSA:3.40.190.10 65 86 2.1E-7 T 01-11-2018 DOE78_10640 31c242e4aae39d83e79e58ace9f7d075 693 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 81 615 6.3E-185 T 01-11-2018 DOE78_10640 31c242e4aae39d83e79e58ace9f7d075 693 Pfam PF00905 Penicillin binding protein transpeptidase domain 340 615 2.1E-39 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_10640 31c242e4aae39d83e79e58ace9f7d075 693 Gene3D G3DSA:3.40.710.10 270 621 1.7E-129 T 01-11-2018 DOE78_10640 31c242e4aae39d83e79e58ace9f7d075 693 Gene3D G3DSA:1.10.3810.10 61 259 3.3E-75 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_10640 31c242e4aae39d83e79e58ace9f7d075 693 SUPERFAMILY SSF53955 58 266 7.31E-74 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_10640 31c242e4aae39d83e79e58ace9f7d075 693 SUPERFAMILY SSF56601 224 623 1.05E-109 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_10640 31c242e4aae39d83e79e58ace9f7d075 693 Pfam PF00912 Transglycosylase 69 242 8.3E-62 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 Pfam PF00232 Glycosyl hydrolase family 1 2 470 1.2E-136 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 Gene3D G3DSA:3.20.20.80 1 473 1.3E-154 T 01-11-2018 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 1.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 1.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 1.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 1.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 1.1E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22300 73ab55fd85c7a02bfecd38729c5d947e 473 SUPERFAMILY SSF51445 2 471 1.71E-160 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_12285 96812fc7e86b18affb031e1f9789db23 330 Gene3D G3DSA:3.30.360.10 119 316 1.8E-69 T 01-11-2018 DOE78_12285 96812fc7e86b18affb031e1f9789db23 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 117 1.0E-24 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_12285 96812fc7e86b18affb031e1f9789db23 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 199 4.6E-10 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_12285 96812fc7e86b18affb031e1f9789db23 330 SUPERFAMILY SSF55347 140 297 6.43E-20 T 01-11-2018 DOE78_12285 96812fc7e86b18affb031e1f9789db23 330 SUPERFAMILY SSF51735 3 164 6.81E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_12285 96812fc7e86b18affb031e1f9789db23 330 Gene3D G3DSA:3.40.50.720 3 302 1.8E-69 T 01-11-2018 DOE78_14635 a84e8f6d9a6d52b92115502a69719aa6 324 SUPERFAMILY SSF50891 187 293 1.06E-9 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_14635 a84e8f6d9a6d52b92115502a69719aa6 324 SMART SM00797 24 304 1.2E-121 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DOE78_14635 a84e8f6d9a6d52b92115502a69719aa6 324 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 305 1.1E-93 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DOE78_14635 a84e8f6d9a6d52b92115502a69719aa6 324 Gene3D G3DSA:2.40.100.10 177 313 4.6E-46 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_14635 a84e8f6d9a6d52b92115502a69719aa6 324 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 287 9.7E-87 T 01-11-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DOE78_23755 44305d2135b8734577a7e97b490a6c2a 431 SMART SM00304 73 126 5.4E-8 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_23755 44305d2135b8734577a7e97b490a6c2a 431 Pfam PF00672 HAMP domain 75 122 5.0E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_23755 44305d2135b8734577a7e97b490a6c2a 431 Gene3D G3DSA:1.10.8.500 72 121 5.4E-5 T 01-11-2018 DOE78_23755 44305d2135b8734577a7e97b490a6c2a 431 Gene3D G3DSA:1.10.287.950 122 430 4.1E-59 T 01-11-2018 DOE78_23755 44305d2135b8734577a7e97b490a6c2a 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 233 383 2.6E-34 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_23755 44305d2135b8734577a7e97b490a6c2a 431 SMART SM00283 155 430 1.5E-51 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_23755 44305d2135b8734577a7e97b490a6c2a 431 SUPERFAMILY SSF58104 102 430 1.57E-64 T 01-11-2018 DOE78_02005 473d6fb9b7d084cd1c1bfcad3f8b686a 153 SUPERFAMILY SSF53056 15 146 1.14E-5 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DOE78_02005 473d6fb9b7d084cd1c1bfcad3f8b686a 153 Gene3D G3DSA:3.40.1050.10 42 149 1.5E-6 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DOE78_08340 74b796b5b81b6108f079da4590a4ecfd 257 Gene3D G3DSA:3.40.1180.10 13 257 3.9E-99 T 01-11-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DOE78_08340 74b796b5b81b6108f079da4590a4ecfd 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 201 218 - T 01-11-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DOE78_08340 74b796b5b81b6108f079da4590a4ecfd 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 28 256 40.348 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DOE78_08340 74b796b5b81b6108f079da4590a4ecfd 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 35 255 2.0E-83 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DOE78_08340 74b796b5b81b6108f079da4590a4ecfd 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 28 255 4.1E-87 T 01-11-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DOE78_08340 74b796b5b81b6108f079da4590a4ecfd 257 SUPERFAMILY SSF64005 23 250 3.79E-88 T 01-11-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 Gene3D G3DSA:3.40.50.300 8 180 1.9E-45 T 01-11-2018 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 Hamap MF_00109 Shikimate kinase [aroK]. 10 175 24.28 T 01-11-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 ProSitePatterns PS01128 Shikimate kinase signature. 66 91 - T 01-11-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 SUPERFAMILY SSF52540 12 171 2.79E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 PRINTS PR01100 Shikimate kinase family signature 13 28 2.7E-16 T 01-11-2018 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 PRINTS PR01100 Shikimate kinase family signature 83 92 2.7E-16 T 01-11-2018 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 PRINTS PR01100 Shikimate kinase family signature 37 50 2.7E-16 T 01-11-2018 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 PRINTS PR01100 Shikimate kinase family signature 65 73 2.7E-16 T 01-11-2018 DOE78_20615 c1cd7626b109f3d864544c4fab438632 184 Pfam PF01202 Shikimate kinase 19 174 9.3E-43 T 01-11-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DOE78_18325 eca73339b8875d841141716211bde631 163 PIRSF PIRSF030140 1 163 1.1E-56 T 01-11-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 DOE78_18325 eca73339b8875d841141716211bde631 163 SUPERFAMILY SSF101386 2 163 6.1E-40 T 01-11-2018 DOE78_18325 eca73339b8875d841141716211bde631 163 Gene3D G3DSA:1.10.4010.10 1 163 2.3E-14 T 01-11-2018 DOE78_18325 eca73339b8875d841141716211bde631 163 Pfam PF08761 dUTPase 2 163 6.6E-49 T 01-11-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 DOE78_01160 7d3e1bbd978bc2a977cea1996a6b414f 145 Gene3D G3DSA:3.40.930.10 2 143 2.3E-46 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_01160 7d3e1bbd978bc2a977cea1996a6b414f 145 SUPERFAMILY SSF55804 4 143 3.4E-43 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_01160 7d3e1bbd978bc2a977cea1996a6b414f 145 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_01160 7d3e1bbd978bc2a977cea1996a6b414f 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 143 2.5E-38 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.588 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 SMART SM00562 1 138 3.7E-94 T 01-11-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 SUPERFAMILY SSF54919 1 148 1.1E-60 T 01-11-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 5.0E-53 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 5.0E-53 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 5.0E-53 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 5.0E-53 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 5.0E-53 T 01-11-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 5.6E-59 T 01-11-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16080 4724c40bfd4599acdfc2ccdff62a57fc 148 Gene3D G3DSA:3.30.70.141 1 148 2.2E-63 T 01-11-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 SUPERFAMILY SSF57884 5 86 1.31E-30 T 01-11-2018 IPR035451 Ada-like domain superfamily DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 Gene3D G3DSA:3.40.10.10 2 75 1.1E-29 T 01-11-2018 IPR035451 Ada-like domain superfamily DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 Gene3D G3DSA:1.10.10.60 80 132 2.0E-15 T 01-11-2018 DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 Pfam PF02805 Metal binding domain of Ada 10 74 2.3E-29 T 01-11-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 Pfam PF12833 Helix-turn-helix domain 104 182 1.4E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 SUPERFAMILY SSF46689 81 131 5.97E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 Gene3D G3DSA:1.10.10.60 133 188 2.6E-15 T 01-11-2018 DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 SUPERFAMILY SSF46689 134 183 4.3E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 PIRSF PIRSF000408 4 189 5.1E-55 T 01-11-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA DOE78_04125 c9ca67dcf5728edb18eaf8fd5d1e5dd9 190 SMART SM00342 98 181 2.3E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_17120 e01a620876dc1b88219f3a797c9e9105 626 PIRSF PIRSF005091 1 617 8.1E-188 T 01-11-2018 IPR012160 Lipoteichoic acid synthase-like DOE78_17120 e01a620876dc1b88219f3a797c9e9105 626 SUPERFAMILY SSF53649 243 615 4.25E-71 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_17120 e01a620876dc1b88219f3a797c9e9105 626 Gene3D G3DSA:3.40.720.10 237 543 1.3E-76 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_17120 e01a620876dc1b88219f3a797c9e9105 626 Pfam PF00884 Sulfatase 245 533 1.4E-32 T 01-11-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 PIRSF PIRSF000850 96 291 0.08 T 01-11-2018 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 PIRSF PIRSF000850 385 477 1.7 T 01-11-2018 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 PIRSF PIRSF000850 274 398 0.44 T 01-11-2018 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 Hamap MF_01916 Cardiolipin synthase. 8 482 47.139 T 01-11-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 SMART SM00155 217 244 4.6E-6 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 SMART SM00155 395 422 2.1E-4 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 SUPERFAMILY SSF56024 269 466 3.81E-51 T 01-11-2018 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 3 482 4.5E-198 T 01-11-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 Gene3D G3DSA:3.30.870.10 311 457 2.0E-25 T 01-11-2018 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 Pfam PF13091 PLD-like domain 323 449 3.8E-25 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 Pfam PF13091 PLD-like domain 135 277 2.8E-14 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 56 1.4E-13 T 01-11-2018 IPR027379 Cardiolipin synthase N-terminal DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 Gene3D G3DSA:3.30.870.10 109 301 8.2E-45 T 01-11-2018 DOE78_19540 eded5f3b99cfd83ad73a4f153a028a0f 482 SUPERFAMILY SSF56024 80 312 2.07E-56 T 01-11-2018 DOE78_15775 3f180df07cbd9e9f34363823b3aeda85 151 Pfam PF13690 Chemotaxis phosphatase CheX 44 121 3.1E-13 T 01-11-2018 IPR028051 Chemotaxis phosphatase CheX-like domain DOE78_15775 3f180df07cbd9e9f34363823b3aeda85 151 SUPERFAMILY SSF103039 9 123 4.71E-20 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_15775 3f180df07cbd9e9f34363823b3aeda85 151 Gene3D G3DSA:3.40.1550.10 3 151 9.2E-38 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_19385 99de18de9b807c2728b9130185e1f3c8 60 Pfam PF10957 Sporulation protein Cse60 1 60 6.8E-31 T 01-11-2018 IPR020296 Sporulation protein Cse60 DOE78_19385 99de18de9b807c2728b9130185e1f3c8 60 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 6.0E-14 T 01-11-2018 IPR020296 Sporulation protein Cse60 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 41.785 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 Pfam PF01227 GTP cyclohydrolase I 9 186 1.9E-79 T 01-11-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 Gene3D G3DSA:3.30.1130.10 55 188 6.9E-61 T 01-11-2018 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 SUPERFAMILY SSF55620 3 187 2.37E-77 T 01-11-2018 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 Gene3D G3DSA:1.10.286.10 1 54 1.2E-22 T 01-11-2018 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 01-11-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DOE78_16105 d5df78244ba8c4ea51f6dc729b20ee17 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 187 8.0E-76 T 01-11-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DOE78_23925 1eb44812ff7b2163cfb7c5146f338375 690 Gene3D G3DSA:1.10.3810.10 55 254 2.2E-74 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_23925 1eb44812ff7b2163cfb7c5146f338375 690 Pfam PF00912 Transglycosylase 62 237 2.2E-62 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_23925 1eb44812ff7b2163cfb7c5146f338375 690 Pfam PF00905 Penicillin binding protein transpeptidase domain 328 572 8.7E-31 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_23925 1eb44812ff7b2163cfb7c5146f338375 690 Gene3D G3DSA:3.40.710.10 258 666 1.1E-116 T 01-11-2018 DOE78_23925 1eb44812ff7b2163cfb7c5146f338375 690 SUPERFAMILY SSF53955 50 258 1.38E-73 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_23925 1eb44812ff7b2163cfb7c5146f338375 690 SUPERFAMILY SSF56601 219 660 1.42E-116 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_23925 1eb44812ff7b2163cfb7c5146f338375 690 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 608 6.0E-180 T 01-11-2018 DOE78_06630 f1a5c2f5f53afd7428cd940c4b5dfa93 191 SUPERFAMILY SSF55729 44 114 2.02E-10 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_06630 f1a5c2f5f53afd7428cd940c4b5dfa93 191 Gene3D G3DSA:3.40.630.30 1 134 2.1E-23 T 01-11-2018 DOE78_06630 f1a5c2f5f53afd7428cd940c4b5dfa93 191 Pfam PF13508 Acetyltransferase (GNAT) domain 52 110 1.6E-8 T 01-11-2018 IPR000182 GNAT domain DOE78_03710 07bd2e7ef2d94685338debd262b40f69 266 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03710 07bd2e7ef2d94685338debd262b40f69 266 Pfam PF00005 ABC transporter 20 167 4.3E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03710 07bd2e7ef2d94685338debd262b40f69 266 SMART SM00382 28 216 1.9E-17 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03710 07bd2e7ef2d94685338debd262b40f69 266 Gene3D G3DSA:3.40.50.300 1 249 2.2E-67 T 01-11-2018 DOE78_03710 07bd2e7ef2d94685338debd262b40f69 266 SUPERFAMILY SSF52540 4 229 5.11E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 SUPERFAMILY SSF46785 27 134 9.66E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 Gene3D G3DSA:1.10.10.10 1 140 3.8E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 Pfam PF01047 MarR family 30 87 5.0E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 6.2E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 6.2E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 6.2E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 6.2E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_09720 b0aa4c8cc70a5b7f16dac8153d21c865 148 SMART SM00347 23 123 1.2E-8 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 Pfam PF07694 5TMR of 5TMR-LYT 37 171 2.0E-6 T 01-11-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 Gene3D G3DSA:3.30.565.10 265 415 1.1E-39 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 SMART SM00388 203 269 5.1E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 6.4E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 6.4E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 6.4E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 6.4E-13 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 415 7.5E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 265 4.8E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 Gene3D G3DSA:1.10.287.130 189 264 9.2E-19 T 01-11-2018 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 SUPERFAMILY SSF55874 258 415 1.7E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 SUPERFAMILY SSF47384 192 266 6.87E-15 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_05365 e8e40a67cd0c387fc363fc254e3790b0 421 SMART SM00387 310 417 3.7E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 SMART SM00448 1 115 6.9E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 SUPERFAMILY SSF52172 1 148 1.57E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 Pfam PF00072 Response regulator receiver domain 3 114 2.5E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 Gene3D G3DSA:1.10.10.60 426 478 1.3E-15 T 01-11-2018 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 SUPERFAMILY SSF46689 481 530 1.84E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 Pfam PF12833 Helix-turn-helix domain 451 528 2.0E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 497 512 1.0E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 512 528 1.0E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 SMART SM00342 445 528 4.5E-26 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 Gene3D G3DSA:1.10.10.60 479 533 2.2E-17 T 01-11-2018 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 482 524 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 Gene3D G3DSA:3.40.50.2300 1 137 1.4E-32 T 01-11-2018 DOE78_08800 b461b2f3b02b652ff3f78c3c6adf30ab 533 SUPERFAMILY SSF46689 429 478 7.17E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 Gene3D G3DSA:3.30.980.40 305 408 3.3E-36 T 01-11-2018 DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 SUPERFAMILY SSF46785 705 769 1.81E-21 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 Pfam PF01580 FtsK/SpoIIIE family 413 609 6.1E-66 T 01-11-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 SMART SM00382 448 630 0.003 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 Gene3D G3DSA:1.10.10.10 701 765 1.8E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 Pfam PF09397 Ftsk gamma domain 707 767 3.1E-28 T 01-11-2018 IPR018541 FtsK gamma domain DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 SUPERFAMILY SSF52540 386 681 3.54E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 SMART SM00843 704 769 8.3E-38 T 01-11-2018 IPR018541 FtsK gamma domain DOE78_08480 4374385d91ff318188ee90a5e7bd2c74 779 Gene3D G3DSA:3.40.50.300 410 695 3.5E-112 T 01-11-2018 DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 Gene3D G3DSA:3.30.465.10 351 436 4.2E-17 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 SMART SM00116 225 274 0.065 T 01-11-2018 IPR000644 CBS domain DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 SMART SM00116 290 338 9.4 T 01-11-2018 IPR000644 CBS domain DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 Pfam PF03471 Transporter associated domain 355 429 7.2E-17 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 Pfam PF00571 CBS domain 285 338 4.5E-4 T 01-11-2018 IPR000644 CBS domain DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 Pfam PF00571 CBS domain 217 273 3.9E-6 T 01-11-2018 IPR000644 CBS domain DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 SUPERFAMILY SSF54631 204 341 4.67E-31 T 01-11-2018 DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 Pfam PF01595 Domain of unknown function DUF21 8 201 5.8E-42 T 01-11-2018 IPR002550 CNNM, transmembrane domain DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 Gene3D G3DSA:3.10.580.10 197 350 4.4E-48 T 01-11-2018 DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 SUPERFAMILY SSF56176 351 428 2.04E-17 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_05710 e704e4aaac8d67a186402bc33b9f204a 459 SMART SM01091 354 431 8.4E-23 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 334 345 - T 01-11-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 7 562 49.049 T 01-11-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 Gene3D G3DSA:3.30.1510.10 135 253 1.3E-201 T 01-11-2018 DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 109 119 - T 01-11-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 SUPERFAMILY SSF52540 10 560 1.08E-244 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 Pfam PF01268 Formate--tetrahydrofolate ligase 8 562 3.9E-268 T 01-11-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 Gene3D G3DSA:3.40.50.300 12 444 1.3E-201 T 01-11-2018 DOE78_15605 350e377e7d4013e89083708bbbccc21c 562 Gene3D G3DSA:3.10.410.10 449 538 2.1E-36 T 01-11-2018 DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 PIRSF PIRSF000498 1 212 3.3E-77 T 01-11-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 Gene3D G3DSA:2.40.30.20 101 205 1.6E-31 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 Gene3D G3DSA:2.40.30.20 1 88 7.6E-32 T 01-11-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 Pfam PF00677 Lumazine binding domain 3 86 3.3E-24 T 01-11-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 Pfam PF00677 Lumazine binding domain 99 183 3.2E-21 T 01-11-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 SUPERFAMILY SSF63380 1 88 5.53E-28 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 SUPERFAMILY SSF63380 92 195 3.49E-31 T 01-11-2018 IPR017938 Riboflavin synthase-like beta-barrel DOE78_24050 4f1c021170027441df9ac623fcf6f8ad 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 2.8E-78 T 01-11-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_06220 0d17e6323ed6bb21974f314df7503ecb 288 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 77 284 3.8E-73 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DOE78_06220 0d17e6323ed6bb21974f314df7503ecb 288 Gene3D G3DSA:3.90.850.10 72 288 1.1E-88 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_06220 0d17e6323ed6bb21974f314df7503ecb 288 SUPERFAMILY SSF56529 67 284 4.97E-80 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_14415 e3d5a5a837605a0a1eba892874fa9f78 323 SUPERFAMILY SSF54593 5 296 5.87E-48 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_14415 e3d5a5a837605a0a1eba892874fa9f78 323 Gene3D G3DSA:3.10.180.10 8 318 1.6E-114 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_14415 e3d5a5a837605a0a1eba892874fa9f78 323 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 159 279 2.2E-16 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_14415 e3d5a5a837605a0a1eba892874fa9f78 323 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 123 5.6E-11 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_14415 e3d5a5a837605a0a1eba892874fa9f78 323 Gene3D G3DSA:3.10.180.10 69 223 1.6E-114 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_21220 5583b1d5890f83ccd9d9d0240ec7478f 305 PIRSF PIRSF000196 1 305 6.3E-132 T 01-11-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 DOE78_21220 5583b1d5890f83ccd9d9d0240ec7478f 305 Gene3D G3DSA:3.20.20.530 19 305 1.9E-97 T 01-11-2018 DOE78_21220 5583b1d5890f83ccd9d9d0240ec7478f 305 SUPERFAMILY SSF51730 37 301 2.86E-75 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like DOE78_21220 5583b1d5890f83ccd9d9d0240ec7478f 305 Pfam PF01619 Proline dehydrogenase 44 298 4.1E-36 T 01-11-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Pfam PF00326 Prolyl oligopeptidase family 456 664 1.1E-53 T 01-11-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Gene3D G3DSA:2.120.10.30 160 302 2.5E-17 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Gene3D G3DSA:2.120.10.30 5 155 2.7E-26 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Gene3D G3DSA:3.40.50.1820 411 665 1.2E-73 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Pfam PF07676 WD40-like Beta Propeller Repeat 197 217 0.13 T 01-11-2018 IPR011659 WD40-like Beta Propeller DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Pfam PF07676 WD40-like Beta Propeller Repeat 238 260 0.0021 T 01-11-2018 IPR011659 WD40-like Beta Propeller DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Pfam PF07676 WD40-like Beta Propeller Repeat 63 97 6.7E-7 T 01-11-2018 IPR011659 WD40-like Beta Propeller DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 Pfam PF07676 WD40-like Beta Propeller Repeat 117 130 8.4E-4 T 01-11-2018 IPR011659 WD40-like Beta Propeller DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 SUPERFAMILY SSF53474 408 664 3.16E-70 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06135 ec9ac0671a73c552cfc81106a1f6ffa4 665 SUPERFAMILY SSF82171 18 402 1.31E-43 T 01-11-2018 DOE78_22260 b1bd8248c7052b8193849ba7347b2008 93 Gene3D G3DSA:1.10.8.910 29 92 6.8E-11 T 01-11-2018 IPR038300 SASP, alpha/beta-type superfamily DOE78_22260 b1bd8248c7052b8193849ba7347b2008 93 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 87 1.5E-20 T 01-11-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DOE78_20460 20bdbd93eac01f17a560aed7ada568ac 400 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 19 376 2.7E-81 T 01-11-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 DOE78_20460 20bdbd93eac01f17a560aed7ada568ac 400 Gene3D G3DSA:3.40.50.12580 187 363 5.7E-100 T 01-11-2018 DOE78_20460 20bdbd93eac01f17a560aed7ada568ac 400 SUPERFAMILY SSF53756 146 304 4.5E-12 T 01-11-2018 DOE78_20460 20bdbd93eac01f17a560aed7ada568ac 400 Gene3D G3DSA:3.40.50.11820 21 369 5.7E-100 T 01-11-2018 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SMART SM00387 354 460 4.1E-32 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SUPERFAMILY SSF55874 302 458 7.99E-40 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Gene3D G3DSA:3.30.450.20 1 130 7.0E-17 T 01-11-2018 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1 117 5.6E-16 T 01-11-2018 IPR000014 PAS domain DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 238 1.9E-19 T 01-11-2018 IPR000014 PAS domain DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 5.8E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 5.8E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 5.8E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 5.8E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SMART SM00091 127 192 1.1E-7 T 01-11-2018 IPR000014 PAS domain DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SMART SM00091 1 66 4.6E-4 T 01-11-2018 IPR000014 PAS domain DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SMART SM00388 248 311 2.3E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SMART SM00086 190 233 7.3 T 01-11-2018 IPR001610 PAC motif DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SMART SM00086 73 115 2.8E-5 T 01-11-2018 IPR001610 PAC motif DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Gene3D G3DSA:1.10.287.130 234 305 5.5E-17 T 01-11-2018 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Pfam PF08447 PAS fold 23 107 4.1E-10 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Pfam PF08447 PAS fold 150 224 2.0E-7 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Gene3D G3DSA:3.30.450.20 131 233 1.5E-20 T 01-11-2018 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SUPERFAMILY SSF55785 113 230 1.3E-18 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Gene3D G3DSA:3.30.565.10 306 458 4.6E-43 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 308 2.7E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SUPERFAMILY SSF55785 5 115 5.76E-17 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 457 2.4E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13330 ad80b9ee5c65a762cc0bd10ae8b83268 463 SUPERFAMILY SSF47384 241 308 2.55E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_23295 09ea8d40e953d9f237bf573e64409412 254 SUPERFAMILY SSF89550 1 210 1.26E-15 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DOE78_23295 09ea8d40e953d9f237bf573e64409412 254 Gene3D G3DSA:3.20.20.140 1 254 3.2E-93 T 01-11-2018 DOE78_23295 09ea8d40e953d9f237bf573e64409412 254 PIRSF PIRSF016557 1 254 8.9E-105 T 01-11-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Pfam PF04898 Glutamate synthase central domain 446 725 6.8E-69 T 01-11-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Gene3D G3DSA:2.160.20.60 1198 1489 1.1E-61 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 SUPERFAMILY SSF56235 21 393 2.99E-73 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 SUPERFAMILY SSF51395 445 1165 3.97E-162 T 01-11-2018 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Pfam PF01645 Conserved region in glutamate synthase 787 1147 1.8E-103 T 01-11-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Gene3D G3DSA:3.20.20.70 470 1164 0.0 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 SUPERFAMILY SSF69336 1214 1486 3.14E-45 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Gene3D G3DSA:3.20.20.70 421 772 0.0 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Pfam PF00310 Glutamine amidotransferases class-II 21 384 1.9E-49 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Gene3D G3DSA:3.60.20.10 21 531 0.0 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_05215 19eec01db051da0bad48e0f9746eefaf 1489 Pfam PF01493 GXGXG motif 1248 1407 4.2E-18 T 01-11-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 Gene3D G3DSA:1.10.10.10 1 74 3.7E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 SUPERFAMILY SSF46894 8 72 5.44E-23 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 SMART SM00421 9 66 4.9E-25 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 2.6E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 2.6E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 2.6E-12 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_18200 56099b8fafb5beb402b9e330717e5167 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 6.3E-24 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_05790 a83275703f64193d8a782a72a379bc3a 350 Pfam PF14398 YheC/D like ATP-grasp 109 335 2.8E-42 T 01-11-2018 IPR026838 Endospore coat-associated protein YheC/D DOE78_05790 a83275703f64193d8a782a72a379bc3a 350 SUPERFAMILY SSF56059 133 323 1.87E-7 T 01-11-2018 DOE78_21305 25134e2ef4bf64faf467b4aa389c1ff9 260 Gene3D G3DSA:3.40.1010.10 2 119 4.3E-45 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_21305 25134e2ef4bf64faf467b4aa389c1ff9 260 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 241 3.3E-98 T 01-11-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_21305 25134e2ef4bf64faf467b4aa389c1ff9 260 SUPERFAMILY SSF53790 2 249 3.53E-82 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_21305 25134e2ef4bf64faf467b4aa389c1ff9 260 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 217 3.5E-48 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_21305 25134e2ef4bf64faf467b4aa389c1ff9 260 Gene3D G3DSA:3.30.950.10 120 259 7.8E-49 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DOE78_21305 25134e2ef4bf64faf467b4aa389c1ff9 260 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_07525 0701c3f9835d5f2dfc72ff5904bbb3c0 119 Gene3D G3DSA:3.30.310.100 1 119 6.6E-47 T 01-11-2018 IPR036491 YugN-like superfamily DOE78_07525 0701c3f9835d5f2dfc72ff5904bbb3c0 119 SUPERFAMILY SSF160755 1 113 2.09E-41 T 01-11-2018 IPR036491 YugN-like superfamily DOE78_07525 0701c3f9835d5f2dfc72ff5904bbb3c0 119 Pfam PF08868 YugN-like family 8 104 5.2E-14 T 01-11-2018 IPR014967 Uncharacterised protein family, YugN-like DOE78_24730 670a342e425d1e4cea96930adee927fe 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 01-11-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_24730 670a342e425d1e4cea96930adee927fe 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 3.0E-7 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24730 670a342e425d1e4cea96930adee927fe 44 Pfam PF00468 Ribosomal protein L34 1 44 2.7E-23 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24730 670a342e425d1e4cea96930adee927fe 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.3E-20 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24730 670a342e425d1e4cea96930adee927fe 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.78 T 01-11-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_11385 c540d2006e27a2c5d433cd6ccc2dc551 164 Gene3D G3DSA:1.20.120.450 6 150 5.2E-19 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_11385 c540d2006e27a2c5d433cd6ccc2dc551 164 Pfam PF07609 Protein of unknown function (DUF1572) 3 163 8.3E-74 T 01-11-2018 IPR011466 Protein of unknown function DUF1572 DOE78_11385 c540d2006e27a2c5d433cd6ccc2dc551 164 SUPERFAMILY SSF109854 10 150 1.14E-24 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_07910 18c3b14f198d00c3706873b9203ceaf5 402 SUPERFAMILY SSF102645 183 396 9.16E-75 T 01-11-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DOE78_07910 18c3b14f198d00c3706873b9203ceaf5 402 SUPERFAMILY SSF52507 2 179 6.54E-62 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DOE78_07910 18c3b14f198d00c3706873b9203ceaf5 402 Gene3D G3DSA:3.40.50.1950 1 183 8.9E-62 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DOE78_07910 18c3b14f198d00c3706873b9203ceaf5 402 Gene3D G3DSA:3.40.50.10300 184 400 4.4E-84 T 01-11-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DOE78_07910 18c3b14f198d00c3706873b9203ceaf5 402 Pfam PF02441 Flavoprotein 4 176 1.2E-49 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DOE78_07910 18c3b14f198d00c3706873b9203ceaf5 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 389 6.3E-151 T 01-11-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DOE78_07910 18c3b14f198d00c3706873b9203ceaf5 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 366 2.6E-72 T 01-11-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DOE78_11980 e9be3c3ac3dc63dcbfc1b69e4a7174df 78 SUPERFAMILY SSF53807 8 72 1.18E-11 T 01-11-2018 DOE78_11980 e9be3c3ac3dc63dcbfc1b69e4a7174df 78 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 72 1.6E-9 T 01-11-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DOE78_11980 e9be3c3ac3dc63dcbfc1b69e4a7174df 78 Gene3D G3DSA:3.40.50.1980 16 75 3.9E-15 T 01-11-2018 DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 SMART SM00487 56 260 1.2E-30 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 Pfam PF09369 Domain of unknown function (DUF1998) 654 733 2.3E-21 T 01-11-2018 IPR018973 DEAD/DEAH-box helicase, putative DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 Gene3D G3DSA:3.40.50.300 25 250 6.4E-47 T 01-11-2018 DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 SUPERFAMILY SSF52540 9 195 1.42E-7 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 Pfam PF00270 DEAD/DEAH box helicase 62 232 5.3E-29 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 Pfam PF00271 Helicase conserved C-terminal domain 288 393 9.3E-13 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 SUPERFAMILY SSF52540 106 413 2.18E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 SMART SM00490 307 394 2.3E-12 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_15845 ebb93dff129ff7b76672b6426cbc7b70 763 Gene3D G3DSA:3.40.50.300 271 431 4.3E-21 T 01-11-2018 DOE78_07075 18b9a593ad3843862d792b899a2a4c02 94 SUPERFAMILY SSF54862 24 91 2.35E-17 T 01-11-2018 DOE78_07075 18b9a593ad3843862d792b899a2a4c02 94 Gene3D G3DSA:3.30.70.20 11 88 1.2E-17 T 01-11-2018 DOE78_07075 18b9a593ad3843862d792b899a2a4c02 94 PIRSF PIRSF036548 1 94 7.1E-21 T 01-11-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 DOE78_07075 18b9a593ad3843862d792b899a2a4c02 94 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 18 89 1.6E-11 T 01-11-2018 DOE78_07075 18b9a593ad3843862d792b899a2a4c02 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_14320 7d685c6cabdadd0a204d8cbcd2cda5cc 373 SUPERFAMILY SSF55874 243 362 2.49E-13 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14320 7d685c6cabdadd0a204d8cbcd2cda5cc 373 SMART SM00387 274 365 0.0046 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14320 7d685c6cabdadd0a204d8cbcd2cda5cc 373 Pfam PF07730 Histidine kinase 175 238 4.9E-22 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_14320 7d685c6cabdadd0a204d8cbcd2cda5cc 373 Gene3D G3DSA:3.30.565.10 239 363 1.1E-28 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 Gene3D G3DSA:3.40.50.300 91 286 2.4E-128 T 01-11-2018 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 SUPERFAMILY SSF52540 43 355 8.41E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 Pfam PF02978 Signal peptide binding domain 329 427 1.1E-33 T 01-11-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 7.5E-79 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 SMART SM00963 2 87 4.5E-34 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 SMART SM00382 100 275 2.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 SMART SM00962 101 297 3.6E-119 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 434 35.461 T 01-11-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 2.6E-191 T 01-11-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 Gene3D G3DSA:1.10.260.30 328 447 1.9E-45 T 01-11-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 Gene3D G3DSA:1.20.120.140 6 307 2.4E-128 T 01-11-2018 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 SUPERFAMILY SSF47446 329 431 6.7E-38 T 01-11-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DOE78_08045 5688fce74800fd3bf4222402dc5bef47 450 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 3.3E-23 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_22445 a33f09b4ec07e6ba202bf4c39c56b532 437 SUPERFAMILY SSF53474 187 385 6.01E-25 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_22445 a33f09b4ec07e6ba202bf4c39c56b532 437 Gene3D G3DSA:3.40.50.1820 179 437 7.1E-49 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_22445 a33f09b4ec07e6ba202bf4c39c56b532 437 Pfam PF00326 Prolyl oligopeptidase family 282 325 1.4E-7 T 01-11-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DOE78_22445 a33f09b4ec07e6ba202bf4c39c56b532 437 Gene3D G3DSA:2.60.40.2180 31 171 1.4E-15 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 Gene3D G3DSA:3.40.50.880 141 354 2.0E-67 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 SUPERFAMILY SSF52317 149 352 6.11E-58 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 352 1.5E-148 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 Pfam PF00117 Glutamine amidotransferase class-I 173 349 1.4E-47 T 01-11-2018 IPR017926 Glutamine amidotransferase DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 2.6E-37 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 2.6E-37 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 2.6E-37 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 2.6E-37 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 2.6E-37 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 355 49.259 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 Gene3D G3DSA:3.50.30.20 1 140 3.0E-57 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00097 Anthranilate synthase component II signature 240 251 1.7E-6 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00097 Anthranilate synthase component II signature 213 222 1.7E-6 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00097 Anthranilate synthase component II signature 326 339 1.7E-6 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 SUPERFAMILY SSF52021 1 141 2.48E-57 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 4.9E-53 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 SMART SM01097 1 131 1.3E-89 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 1.0E-11 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 1.0E-11 T 01-11-2018 DOE78_07850 249fd99ca3eb25a37f5eeae6861dde15 367 PRINTS PR00096 Glutamine amidotransferase superfamily signature 326 339 1.0E-11 T 01-11-2018 DOE78_11825 17e61fea61becb9e1a6ae6be6c23ab4a 102 Pfam PF07098 Protein of unknown function (DUF1360) 10 100 4.6E-30 T 01-11-2018 IPR010773 Mycobacterium phage PG1, Gp7 DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 373 523 2.9E-55 T 01-11-2018 IPR001162 UvrC family homology region DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 4.2E-10 T 01-11-2018 IPR000305 GIY-YIG endonuclease DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 Gene3D G3DSA:1.10.150.20 527 583 5.0E-17 T 01-11-2018 DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 Pfam PF02151 UvrB/uvrC motif 199 230 4.3E-8 T 01-11-2018 IPR001943 UVR domain GO:0005515 DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 SUPERFAMILY SSF47781 502 589 6.04E-18 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 569 4.0E-211 T 01-11-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 Gene3D G3DSA:3.30.420.340 365 523 2.1E-60 T 01-11-2018 IPR038476 UvrC homology region 2 superfamily DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 SMART SM00465 15 95 6.7E-24 T 01-11-2018 IPR000305 GIY-YIG endonuclease DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 SUPERFAMILY SSF46600 182 235 4.71E-13 T 01-11-2018 IPR036876 UVR domain superfamily DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 27.757 T 01-11-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 Gene3D G3DSA:3.40.1440.10 1 99 2.8E-38 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DOE78_18235 84f5b4e3717f81b6d27d7dea9665ef57 590 SUPERFAMILY SSF82771 14 97 2.35E-21 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DOE78_17180 a8570bfb81ebca93ab030763c19d8f8d 386 Pfam PF00534 Glycosyl transferases group 1 199 358 9.1E-42 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_17180 a8570bfb81ebca93ab030763c19d8f8d 386 Pfam PF13439 Glycosyltransferase Family 4 11 184 8.3E-29 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_17180 a8570bfb81ebca93ab030763c19d8f8d 386 SUPERFAMILY SSF53756 2 379 1.08E-91 T 01-11-2018 DOE78_17180 a8570bfb81ebca93ab030763c19d8f8d 386 Gene3D G3DSA:3.40.50.2000 1 377 3.4E-92 T 01-11-2018 DOE78_17180 a8570bfb81ebca93ab030763c19d8f8d 386 Gene3D G3DSA:3.40.50.2000 181 360 3.4E-92 T 01-11-2018 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 1.8E-37 T 01-11-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 SMART SM00480 17 373 1.9E-166 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 SUPERFAMILY SSF55979 1 127 1.67E-23 T 01-11-2018 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 SUPERFAMILY SSF55979 133 251 1.43E-25 T 01-11-2018 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 SUPERFAMILY SSF55979 254 377 6.28E-32 T 01-11-2018 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 5.3E-40 T 01-11-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 Gene3D G3DSA:3.10.150.10 1 250 3.2E-135 T 01-11-2018 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 Gene3D G3DSA:3.70.10.10 145 375 3.2E-135 T 01-11-2018 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 PIRSF PIRSF000804 1 378 6.6E-118 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 7.3E-36 T 01-11-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DOE78_00010 b3ca033fea1d25ccd4de0a3e871f1995 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 6.6E-127 T 01-11-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 359 369 - T 01-11-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 Pfam PF00082 Subtilase family 135 416 4.3E-45 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 182 192 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 140 151 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 Gene3D G3DSA:3.40.50.200 111 421 2.6E-99 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 PRINTS PR00723 Subtilisin serine protease family (S8) signature 135 154 4.1E-20 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 191 4.1E-20 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 PRINTS PR00723 Subtilisin serine protease family (S8) signature 358 374 4.1E-20 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_06815 394d2d5b78fd6aa4d55e8ca451763ea0 421 SUPERFAMILY SSF52743 115 419 7.59E-77 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_23370 bb6738eb53701fb530e2b1431c0b5a81 314 Gene3D G3DSA:1.10.101.10 192 267 1.2E-10 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DOE78_23370 bb6738eb53701fb530e2b1431c0b5a81 314 SUPERFAMILY SSF47090 201 262 1.05E-10 T 01-11-2018 IPR036365 PGBD-like superfamily DOE78_23370 bb6738eb53701fb530e2b1431c0b5a81 314 Gene3D G3DSA:3.40.630.40 1 183 1.6E-52 T 01-11-2018 DOE78_23370 bb6738eb53701fb530e2b1431c0b5a81 314 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 174 5.7E-44 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23370 bb6738eb53701fb530e2b1431c0b5a81 314 SUPERFAMILY SSF53187 1 179 1.73E-50 T 01-11-2018 DOE78_23370 bb6738eb53701fb530e2b1431c0b5a81 314 Pfam PF01471 Putative peptidoglycan binding domain 206 261 1.5E-8 T 01-11-2018 IPR002477 Peptidoglycan binding-like DOE78_23370 bb6738eb53701fb530e2b1431c0b5a81 314 SMART SM00646 64 174 9.3E-31 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_14215 54f49ecdf4af10cdea55798f555ab8e4 278 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 3 270 6.5E-136 T 01-11-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 DOE78_14215 54f49ecdf4af10cdea55798f555ab8e4 278 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 2 271 53.475 T 01-11-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 DOE78_14215 54f49ecdf4af10cdea55798f555ab8e4 278 SUPERFAMILY SSF53639 5 270 1.33E-70 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_14215 54f49ecdf4af10cdea55798f555ab8e4 278 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 237 1.7E-42 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_14215 54f49ecdf4af10cdea55798f555ab8e4 278 SMART SM01007 12 238 8.1E-34 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_14215 54f49ecdf4af10cdea55798f555ab8e4 278 Gene3D G3DSA:3.40.225.10 2 273 2.9E-83 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_09035 08c6abcbf0255aa2572d68438a1ed9d9 259 Gene3D G3DSA:1.10.12.10 201 259 2.8E-23 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DOE78_09035 08c6abcbf0255aa2572d68438a1ed9d9 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 1.3E-69 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DOE78_09035 08c6abcbf0255aa2572d68438a1ed9d9 259 Gene3D G3DSA:3.90.226.10 1 200 4.0E-69 T 01-11-2018 DOE78_09035 08c6abcbf0255aa2572d68438a1ed9d9 259 SUPERFAMILY SSF52096 1 258 4.34E-88 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_09035 08c6abcbf0255aa2572d68438a1ed9d9 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DOE78_10485 4edc042c94a961deb3de565a13736cab 578 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 573 1.0E-42 T 01-11-2018 IPR000160 GGDEF domain DOE78_10485 4edc042c94a961deb3de565a13736cab 578 SUPERFAMILY SSF55073 419 577 8.63E-44 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_10485 4edc042c94a961deb3de565a13736cab 578 Pfam PF07696 7TMR-DISM extracellular 2 47 177 3.4E-21 T 01-11-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 DOE78_10485 4edc042c94a961deb3de565a13736cab 578 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 412 575 1.5E-42 T 01-11-2018 IPR000160 GGDEF domain DOE78_10485 4edc042c94a961deb3de565a13736cab 578 Gene3D G3DSA:2.60.40.2380 43 183 5.1E-20 T 01-11-2018 DOE78_10485 4edc042c94a961deb3de565a13736cab 578 SMART SM00267 403 577 4.4E-50 T 01-11-2018 IPR000160 GGDEF domain DOE78_10485 4edc042c94a961deb3de565a13736cab 578 Pfam PF07695 7TM diverse intracellular signalling 191 392 4.2E-44 T 01-11-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 DOE78_10485 4edc042c94a961deb3de565a13736cab 578 Gene3D G3DSA:3.30.70.270 401 576 6.8E-48 T 01-11-2018 DOE78_22800 52ce13137905c22d2367b3f17fb1813c 176 Pfam PF02417 Chromate transporter 4 171 4.8E-37 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 Pfam PF01134 Glucose inhibited division protein A 9 399 9.1E-174 T 01-11-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.2E-5 T 01-11-2018 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 1.2E-5 T 01-11-2018 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 01-11-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.617 T 01-11-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 Gene3D G3DSA:1.10.150.570 568 620 2.1E-24 T 01-11-2018 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 Pfam PF13932 GidA associated domain 401 615 7.8E-80 T 01-11-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 01-11-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 Gene3D G3DSA:1.10.10.1800 459 549 1.0E-24 T 01-11-2018 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 SUPERFAMILY SSF51905 7 261 5.07E-45 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24705 44c9045a3c92fad0380447f753be2892 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 4.3E-298 T 01-11-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DOE78_24705 44c9045a3c92fad0380447f753be2892 630 Gene3D G3DSA:3.50.50.60 296 458 2.0E-56 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24705 44c9045a3c92fad0380447f753be2892 630 Gene3D G3DSA:3.50.50.60 1 221 1.2E-84 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_24705 44c9045a3c92fad0380447f753be2892 630 SMART SM01228 545 616 4.7E-43 T 01-11-2018 DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 1.4E-13 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 SMART SM00418 14 90 6.2E-19 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 Gene3D G3DSA:1.10.10.10 1 96 1.2E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 SUPERFAMILY SSF46785 9 84 1.36E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 4.1E-18 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 4.1E-18 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 46 4.1E-18 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22395 5b60722e19dc91854c5735f4dab15461 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 4.1E-18 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_07835 15a47ab4295c937c15716e32325ece44 433 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 335 355 - T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DOE78_07835 15a47ab4295c937c15716e32325ece44 433 Pfam PF00860 Permease family 18 387 4.3E-106 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DOE78_07835 15a47ab4295c937c15716e32325ece44 433 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 14 412 3.8E-129 T 01-11-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Gene3D G3DSA:3.20.20.140 1 264 1.7E-81 T 01-11-2018 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Pfam PF02811 PHP domain 5 165 1.2E-32 T 01-11-2018 IPR004013 PHP domain GO:0003824 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Gene3D G3DSA:2.40.50.140 944 1047 1.7E-5 T 01-11-2018 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Gene3D G3DSA:1.10.10.1600 418 495 1.2E-20 T 01-11-2018 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 SUPERFAMILY SSF50249 946 1044 1.66E-7 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 287 707 1.8E-179 T 01-11-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 SMART SM00481 4 71 3.8E-18 T 01-11-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 SUPERFAMILY SSF89550 4 257 6.87E-13 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Gene3D G3DSA:1.10.150.870 760 855 6.9E-8 T 01-11-2018 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Pfam PF01336 OB-fold nucleic acid binding domain 968 1033 2.2E-7 T 01-11-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 Pfam PF14579 Helix-hairpin-helix motif 781 867 3.8E-24 T 01-11-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_18505 fb78b8ba85d90370ddf0e1c5fa752475 1119 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 995 0.0 T 01-11-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_04585 a0adc01f06720be202970f456ae60446 206 Pfam PF01810 LysE type translocator 10 203 3.0E-38 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_04585 a0adc01f06720be202970f456ae60446 206 PIRSF PIRSF006324 1 205 3.2E-55 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_20555 3daadee3febf1f0675459f8c8da59ea7 163 Pfam PF13471 Transglutaminase-like superfamily 60 143 1.7E-18 T 01-11-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal DOE78_20520 ceaf91d9974b666db4c6bf0f3713801e 383 Pfam PF13477 Glycosyl transferase 4-like 4 146 2.5E-16 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_20520 ceaf91d9974b666db4c6bf0f3713801e 383 Pfam PF00534 Glycosyl transferases group 1 185 349 2.7E-37 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_20520 ceaf91d9974b666db4c6bf0f3713801e 383 Gene3D G3DSA:3.40.50.2000 26 368 5.7E-71 T 01-11-2018 DOE78_20520 ceaf91d9974b666db4c6bf0f3713801e 383 Gene3D G3DSA:3.40.50.2000 171 355 5.7E-71 T 01-11-2018 DOE78_20520 ceaf91d9974b666db4c6bf0f3713801e 383 SUPERFAMILY SSF53756 17 363 7.85E-68 T 01-11-2018 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 332 3.0E-46 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 562 1.6E-276 T 01-11-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 SUPERFAMILY SSF56014 432 562 6.02E-35 T 01-11-2018 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 SUPERFAMILY SSF55124 15 147 3.93E-31 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 PRINTS PR00397 Sirohaem Fe-binding site signature 481 499 2.3E-8 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 PRINTS PR00397 Sirohaem Fe-binding site signature 433 451 2.3E-8 T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Gene3D G3DSA:3.90.480.10 81 171 1.2E-25 T 01-11-2018 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Gene3D G3DSA:3.30.413.10 206 342 4.5E-46 T 01-11-2018 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 573 57.452 T 01-11-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 561 0.003 T 01-11-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Gene3D G3DSA:3.30.413.10 429 570 1.8E-37 T 01-11-2018 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 420 1.4E-10 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 77 126 1.7E-16 T 01-11-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 481 497 - T 01-11-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 SUPERFAMILY SSF56014 148 346 1.31E-56 T 01-11-2018 DOE78_01130 ce012e3391994cf589e3b9bcb5177c2a 573 SUPERFAMILY SSF55124 348 424 6.05E-19 T 01-11-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DOE78_03660 68986c2056140393cae65a2b44a145d3 363 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 7 351 1.7E-50 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_03660 68986c2056140393cae65a2b44a145d3 363 Gene3D G3DSA:3.30.300.210 228 355 1.1E-8 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_03660 68986c2056140393cae65a2b44a145d3 363 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 201 352 3.4E-20 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_03085 f27c9262811d6eb108890dd991088213 474 PIRSF PIRSF006060 1 474 2.0E-55 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_03085 f27c9262811d6eb108890dd991088213 474 Pfam PF13520 Amino acid permease 7 435 4.3E-49 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_03085 f27c9262811d6eb108890dd991088213 474 Gene3D G3DSA:1.20.1740.10 2 474 2.3E-62 T 01-11-2018 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 330 4.0E-57 T 01-11-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 PIRSF PIRSF000148 7 349 3.3E-129 T 01-11-2018 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 240 254 - T 01-11-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 SMART SM00859 9 124 1.1E-39 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 SUPERFAMILY SSF51735 9 159 6.05E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 9 345 1.1E-159 T 01-11-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 Gene3D G3DSA:3.40.50.720 10 341 2.0E-140 T 01-11-2018 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 SUPERFAMILY SSF55347 132 331 1.91E-74 T 01-11-2018 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 123 1.0E-32 T 01-11-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 Gene3D G3DSA:3.30.360.10 131 327 2.0E-140 T 01-11-2018 DOE78_08450 84c496d7cc4e01a5a17bc569922b9669 350 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 7 344 37.623 T 01-11-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_23600 30043e4ecf58bf730a0dbb9e5d62fa52 339 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 67 325 6.9E-73 T 01-11-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 DOE78_23600 30043e4ecf58bf730a0dbb9e5d62fa52 339 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 6 327 6.9E-123 T 01-11-2018 IPR014225 Sporulation stage II, protein D firmicutes DOE78_23600 30043e4ecf58bf730a0dbb9e5d62fa52 339 Pfam PF08486 Stage II sporulation protein 65 167 3.4E-24 T 01-11-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal DOE78_16945 3bade10f037b81f89e6209eae36ea9c3 305 Gene3D G3DSA:3.40.50.300 128 274 7.6E-23 T 01-11-2018 DOE78_16945 3bade10f037b81f89e6209eae36ea9c3 305 SUPERFAMILY SSF52540 35 260 5.81E-18 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16945 3bade10f037b81f89e6209eae36ea9c3 305 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 292 2.2E-113 T 01-11-2018 IPR014217 Sporulation stage III, protein AA DOE78_16945 3bade10f037b81f89e6209eae36ea9c3 305 SMART SM00382 135 282 3.8E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_13820 bd23b8bb217fa6ae040477dbe8fb6118 390 Gene3D G3DSA:3.40.640.10 55 287 9.0E-134 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_13820 bd23b8bb217fa6ae040477dbe8fb6118 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 234 243 - T 01-11-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DOE78_13820 bd23b8bb217fa6ae040477dbe8fb6118 390 Pfam PF00155 Aminotransferase class I and II 40 379 6.0E-64 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_13820 bd23b8bb217fa6ae040477dbe8fb6118 390 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 8.9E-147 T 01-11-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 DOE78_13820 bd23b8bb217fa6ae040477dbe8fb6118 390 Gene3D G3DSA:3.90.1150.10 34 376 9.0E-134 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_13820 bd23b8bb217fa6ae040477dbe8fb6118 390 SUPERFAMILY SSF53383 4 388 1.32E-105 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_08440 fdc6c71faa4fee1479c0b0514aefb7bd 298 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 4 289 2.0E-142 T 01-11-2018 IPR014215 Dipicolinic acid synthetase subunit A DOE78_08440 fdc6c71faa4fee1479c0b0514aefb7bd 298 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 123 3.1E-31 T 01-11-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal DOE78_08440 fdc6c71faa4fee1479c0b0514aefb7bd 298 Gene3D G3DSA:3.40.50.720 7 288 1.2E-106 T 01-11-2018 DOE78_08440 fdc6c71faa4fee1479c0b0514aefb7bd 298 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 151 290 1.5E-9 T 01-11-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DOE78_08440 fdc6c71faa4fee1479c0b0514aefb7bd 298 Gene3D G3DSA:3.40.50.720 126 272 1.2E-106 T 01-11-2018 DOE78_08440 fdc6c71faa4fee1479c0b0514aefb7bd 298 SUPERFAMILY SSF51735 130 269 5.97E-18 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_20035 3734646671d6985bb97b58bccff38943 247 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 9.8E-10 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_20035 3734646671d6985bb97b58bccff38943 247 SMART SM00420 6 59 2.1E-12 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_20035 3734646671d6985bb97b58bccff38943 247 SMART SM01134 74 233 9.8E-52 T 01-11-2018 DOE78_20035 3734646671d6985bb97b58bccff38943 247 SUPERFAMILY SSF46785 6 60 1.56E-8 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20035 3734646671d6985bb97b58bccff38943 247 Pfam PF00455 DeoR C terminal sensor domain 76 230 1.2E-41 T 01-11-2018 IPR014036 DeoR C-terminal sensor domain DOE78_20035 3734646671d6985bb97b58bccff38943 247 SUPERFAMILY SSF100950 75 225 1.02E-29 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_22560 d5141555ef375c5ee762942df0a4969b 152 PIRSF PIRSF005384 1 146 1.7E-59 T 01-11-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_22560 d5141555ef375c5ee762942df0a4969b 152 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 144 4.8E-58 T 01-11-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_22560 d5141555ef375c5ee762942df0a4969b 152 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 3.2E-58 T 01-11-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 DOE78_22560 d5141555ef375c5ee762942df0a4969b 152 SUPERFAMILY SSF89623 1 143 1.07E-57 T 01-11-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_22560 d5141555ef375c5ee762942df0a4969b 152 Pfam PF02502 Ribose/Galactose Isomerase 3 138 4.5E-56 T 01-11-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_22560 d5141555ef375c5ee762942df0a4969b 152 Gene3D G3DSA:3.40.1400.10 1 151 1.3E-59 T 01-11-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_05190 e0543f24588ab959a9c74d2a6ba5333a 321 SUPERFAMILY SSF52540 5 255 1.39E-77 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05190 e0543f24588ab959a9c74d2a6ba5333a 321 SMART SM00382 41 233 4.0E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05190 e0543f24588ab959a9c74d2a6ba5333a 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 9.7E-17 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_05190 e0543f24588ab959a9c74d2a6ba5333a 321 Gene3D G3DSA:3.40.50.300 3 321 3.3E-103 T 01-11-2018 DOE78_05190 e0543f24588ab959a9c74d2a6ba5333a 321 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05190 e0543f24588ab959a9c74d2a6ba5333a 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 9.0E-26 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_05190 e0543f24588ab959a9c74d2a6ba5333a 321 Pfam PF00005 ABC transporter 33 183 3.0E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_16620 620851ad0cf39e7a29e79fe8688bf30b 175 Gene3D G3DSA:3.10.120.10 94 173 1.7E-11 T 01-11-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily DOE78_16620 620851ad0cf39e7a29e79fe8688bf30b 175 SUPERFAMILY SSF55856 96 164 6.02E-13 T 01-11-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily DOE78_16620 620851ad0cf39e7a29e79fe8688bf30b 175 SMART SM01117 103 175 3.0E-9 T 01-11-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain DOE78_16620 620851ad0cf39e7a29e79fe8688bf30b 175 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 107 174 3.1E-9 T 01-11-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain DOE78_02110 361824dc2375dbabf38380ac1e070a94 388 SUPERFAMILY SSF50939 33 370 1.01E-50 T 01-11-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 DOE78_02110 361824dc2375dbabf38380ac1e070a94 388 Pfam PF13088 BNR repeat-like domain 49 349 1.4E-60 T 01-11-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 DOE78_02110 361824dc2375dbabf38380ac1e070a94 388 Gene3D G3DSA:2.120.10.10 36 287 2.7E-34 T 01-11-2018 DOE78_08445 7ee9ba6d46cf507196ea25f0e9f1645c 199 SUPERFAMILY SSF52507 6 192 8.5E-30 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DOE78_08445 7ee9ba6d46cf507196ea25f0e9f1645c 199 PIRSF PIRSF001390 1 195 2.4E-79 T 01-11-2018 IPR014214 Dipicolinic acid synthetase, subunit B DOE78_08445 7ee9ba6d46cf507196ea25f0e9f1645c 199 Gene3D G3DSA:3.40.50.1950 1 199 2.8E-59 T 01-11-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DOE78_08445 7ee9ba6d46cf507196ea25f0e9f1645c 199 Pfam PF02441 Flavoprotein 6 169 1.9E-18 T 01-11-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DOE78_08445 7ee9ba6d46cf507196ea25f0e9f1645c 199 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 6 192 1.4E-102 T 01-11-2018 IPR014214 Dipicolinic acid synthetase, subunit B DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 Pfam PF00672 HAMP domain 191 237 5.5E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 SUPERFAMILY SSF55874 299 463 1.44E-48 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 SUPERFAMILY SSF158472 191 237 1.14E-10 T 01-11-2018 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 308 4.7E-21 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 Gene3D G3DSA:3.30.565.10 313 464 1.3E-45 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 SMART SM00388 242 309 2.1E-20 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 Gene3D G3DSA:1.10.287.130 238 312 2.2E-23 T 01-11-2018 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 Gene3D G3DSA:1.10.8.500 188 237 2.4E-8 T 01-11-2018 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 463 4.7E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 8.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 8.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 8.1E-15 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 SUPERFAMILY SSF47384 226 310 5.89E-20 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 SMART SM00304 189 241 2.1E-13 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_15300 3a1aa407d5808b818da10fffa50dcd14 464 SMART SM00387 354 464 4.5E-36 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_04535 8e71e28e364797154bf7435075d20f7c 171 SUPERFAMILY SSF47240 1 159 3.39E-41 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_04535 8e71e28e364797154bf7435075d20f7c 171 Pfam PF00210 Ferritin-like domain 7 140 7.9E-31 T 01-11-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DOE78_04535 8e71e28e364797154bf7435075d20f7c 171 Gene3D G3DSA:1.20.1260.10 1 167 7.2E-38 T 01-11-2018 IPR012347 Ferritin-like DOE78_07810 79af4a188b68152869fa1df8308a7270 923 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 831 0.0 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 632 4.2E-221 T 01-11-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 Gene3D G3DSA:1.10.730.20 631 918 4.2E-103 T 01-11-2018 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 SUPERFAMILY SSF47323 643 917 2.43E-78 T 01-11-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 Gene3D G3DSA:3.90.740.10 193 397 4.1E-264 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 SUPERFAMILY SSF50677 202 392 2.83E-62 T 01-11-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 SUPERFAMILY SSF52374 1 639 4.28E-156 T 01-11-2018 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 21.218 T 01-11-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 Pfam PF06827 Zinc finger found in FPG and IleRS 885 914 3.0E-9 T 01-11-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 6.6E-32 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 6.6E-32 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 6.6E-32 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 390 405 6.6E-32 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 561 6.6E-32 T 01-11-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 Gene3D G3DSA:3.40.50.620 24 620 4.1E-264 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_07810 79af4a188b68152869fa1df8308a7270 923 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_07810 79af4a188b68152869fa1df8308a7270 923 Pfam PF08264 Anticodon-binding domain of tRNA 676 829 6.7E-28 T 01-11-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DOE78_01535 8fe4a20d098eb414a9f50e3e6819e7df 310 Pfam PF08664 YcbB domain 162 299 2.8E-46 T 01-11-2018 IPR013972 YcbB domain DOE78_01535 8fe4a20d098eb414a9f50e3e6819e7df 310 Gene3D G3DSA:3.40.50.12740 2 170 1.0E-21 T 01-11-2018 DOE78_01535 8fe4a20d098eb414a9f50e3e6819e7df 310 SUPERFAMILY SSF52172 5 137 2.13E-21 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_01535 8fe4a20d098eb414a9f50e3e6819e7df 310 Pfam PF00072 Response regulator receiver domain 5 114 4.7E-18 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_01535 8fe4a20d098eb414a9f50e3e6819e7df 310 SMART SM00448 1 114 1.5E-16 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_09980 cb4aad6f22c06b8e2c8cf53271185f2e 539 SUPERFAMILY SSF56112 86 301 1.21E-28 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_09980 cb4aad6f22c06b8e2c8cf53271185f2e 539 Pfam PF01636 Phosphotransferase enzyme family 249 301 4.9E-6 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_09980 cb4aad6f22c06b8e2c8cf53271185f2e 539 Pfam PF03109 ABC1 family 104 220 8.2E-25 T 01-11-2018 IPR004147 UbiB domain DOE78_22685 711ff55113913b6db0b7035e56439535 614 SMART SM00387 494 612 6.0E-5 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_22685 711ff55113913b6db0b7035e56439535 614 Pfam PF06580 Histidine kinase 400 476 3.5E-22 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_22685 711ff55113913b6db0b7035e56439535 614 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 609 4.3E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_22685 711ff55113913b6db0b7035e56439535 614 SMART SM00304 336 388 6.8E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_22685 711ff55113913b6db0b7035e56439535 614 Gene3D G3DSA:3.30.565.10 460 612 5.5E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_22685 711ff55113913b6db0b7035e56439535 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 4.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_22685 711ff55113913b6db0b7035e56439535 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 587 4.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_22685 711ff55113913b6db0b7035e56439535 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 609 4.5E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_22685 711ff55113913b6db0b7035e56439535 614 SUPERFAMILY SSF158472 340 386 1.7E-6 T 01-11-2018 DOE78_22685 711ff55113913b6db0b7035e56439535 614 Gene3D G3DSA:1.20.1480.50 299 393 7.1E-7 T 01-11-2018 DOE78_22685 711ff55113913b6db0b7035e56439535 614 SUPERFAMILY SSF55874 460 609 9.69E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_01660 59f0edef2fe2748f0e50fa3f3fabcfa9 75 SUPERFAMILY SSF140683 1 72 1.96E-21 T 01-11-2018 IPR038062 ScdA-like, N-terminal domain superfamily DOE78_01660 59f0edef2fe2748f0e50fa3f3fabcfa9 75 Pfam PF08984 Domain of unknown function (DUF1858) 5 63 2.7E-20 T 01-11-2018 IPR015077 Domain of unknown function DUF1858 DOE78_01660 59f0edef2fe2748f0e50fa3f3fabcfa9 75 Gene3D G3DSA:1.10.3910.10 1 75 1.5E-31 T 01-11-2018 IPR038062 ScdA-like, N-terminal domain superfamily DOE78_14910 5ec53bdab2139462df06c2a076ecaf1e 225 Pfam PF09335 SNARE associated Golgi protein 74 185 1.2E-19 T 01-11-2018 IPR032816 SNARE associated Golgi protein DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 SUPERFAMILY SSF46689 4 80 3.49E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 SUPERFAMILY SSF48498 76 189 2.34E-13 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.5E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.5E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 Gene3D G3DSA:1.10.10.60 4 51 1.1E-16 T 01-11-2018 DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 Gene3D G3DSA:1.10.357.10 52 190 5.2E-17 T 01-11-2018 DOE78_06040 9d7284fcec152c0067bc0dde13d30fb2 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 6.0E-17 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_06600 ecddefd81ba6be3cac724e364e496526 561 SUPERFAMILY SSF53850 42 555 1.76E-112 T 01-11-2018 DOE78_06600 ecddefd81ba6be3cac724e364e496526 561 Gene3D G3DSA:3.10.105.10 309 532 1.2E-165 T 01-11-2018 DOE78_06600 ecddefd81ba6be3cac724e364e496526 561 PIRSF PIRSF002741 2 561 4.3E-93 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DOE78_06600 ecddefd81ba6be3cac724e364e496526 561 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 479 3.7E-70 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_06600 ecddefd81ba6be3cac724e364e496526 561 Gene3D G3DSA:3.40.190.10 62 549 1.2E-165 T 01-11-2018 DOE78_06600 ecddefd81ba6be3cac724e364e496526 561 Gene3D G3DSA:3.90.76.10 81 205 1.2E-165 T 01-11-2018 DOE78_17045 5489c927cb0d30cbbb1568364ff7c2e8 157 Pfam PF15980 Putative Competence protein ComGF 49 137 2.1E-19 T 01-11-2018 IPR016977 Competence operon G, ComGF DOE78_17045 5489c927cb0d30cbbb1568364ff7c2e8 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 31 4.2E-5 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_17045 5489c927cb0d30cbbb1568364ff7c2e8 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 37 3.1E-4 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_11045 d1733abf261ef4607b80e7d53e649337 74 Pfam PF01381 Helix-turn-helix 20 65 2.0E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_11045 d1733abf261ef4607b80e7d53e649337 74 SUPERFAMILY SSF47413 4 71 2.22E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_11045 d1733abf261ef4607b80e7d53e649337 74 Gene3D G3DSA:1.10.260.40 5 70 6.6E-27 T 01-11-2018 DOE78_11045 d1733abf261ef4607b80e7d53e649337 74 SMART SM00530 9 65 1.5E-11 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 33.716 T 01-11-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 SUPERFAMILY SSF56104 3 236 2.09E-82 T 01-11-2018 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 01-11-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 7 234 1.1E-79 T 01-11-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 01-11-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 Gene3D G3DSA:3.30.200.20 7 232 7.1E-98 T 01-11-2018 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 Gene3D G3DSA:3.30.470.20 85 221 7.1E-98 T 01-11-2018 DOE78_01840 a369d21c15ddef1096c0f01f1a442e6e 239 Pfam PF01259 SAICAR synthetase 7 230 5.4E-68 T 01-11-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_12555 8293ee5e89610fa8f2229bee002c17b7 452 Gene3D G3DSA:1.20.1740.10 10 452 1.3E-63 T 01-11-2018 DOE78_12555 8293ee5e89610fa8f2229bee002c17b7 452 PIRSF PIRSF006060 1 452 1.8E-73 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_12555 8293ee5e89610fa8f2229bee002c17b7 452 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DOE78_12555 8293ee5e89610fa8f2229bee002c17b7 452 Pfam PF00324 Amino acid permease 18 451 3.2E-121 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_04610 a0cf4ecf794acc54bf379d35c0a732c3 339 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 36 321 7.2E-56 T 01-11-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DOE78_04610 a0cf4ecf794acc54bf379d35c0a732c3 339 Gene3D G3DSA:3.40.50.2300 138 329 9.5E-79 T 01-11-2018 DOE78_04610 a0cf4ecf794acc54bf379d35c0a732c3 339 SUPERFAMILY SSF53822 37 250 2.9E-20 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_04610 a0cf4ecf794acc54bf379d35c0a732c3 339 Gene3D G3DSA:3.40.50.2300 50 290 9.5E-79 T 01-11-2018 DOE78_16735 807a8ce1fb412ef823b1c5d73546c3f8 348 Gene3D G3DSA:1.20.5.170 19 70 8.1E-14 T 01-11-2018 DOE78_16735 807a8ce1fb412ef823b1c5d73546c3f8 348 Gene3D G3DSA:1.10.287.130 282 347 5.5E-18 T 01-11-2018 DOE78_16735 807a8ce1fb412ef823b1c5d73546c3f8 348 Pfam PF03308 ArgK protein 41 311 6.1E-101 T 01-11-2018 DOE78_16735 807a8ce1fb412ef823b1c5d73546c3f8 348 SUPERFAMILY SSF52540 24 344 1.86E-87 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16735 807a8ce1fb412ef823b1c5d73546c3f8 348 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 36 340 1.6E-97 T 01-11-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16735 807a8ce1fb412ef823b1c5d73546c3f8 348 Gene3D G3DSA:3.40.50.300 71 279 3.8E-76 T 01-11-2018 DOE78_23745 162cd1fa92bd4e5080ca143c39cb12a2 191 Pfam PF04260 Protein of unknown function (DUF436) 11 181 1.2E-77 T 01-11-2018 IPR006340 Protein of unknown function DUF436 DOE78_23745 162cd1fa92bd4e5080ca143c39cb12a2 191 PIRSF PIRSF007510 3 184 2.1E-81 T 01-11-2018 IPR006340 Protein of unknown function DUF436 DOE78_23745 162cd1fa92bd4e5080ca143c39cb12a2 191 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 13 181 5.0E-65 T 01-11-2018 IPR006340 Protein of unknown function DUF436 DOE78_23745 162cd1fa92bd4e5080ca143c39cb12a2 191 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 11 181 3.5E-80 T 01-11-2018 IPR006340 Protein of unknown function DUF436 DOE78_23745 162cd1fa92bd4e5080ca143c39cb12a2 191 Hamap MF_00800 UPF0340 protein . 1 191 92.623 T 01-11-2018 IPR006340 Protein of unknown function DUF436 DOE78_23745 162cd1fa92bd4e5080ca143c39cb12a2 191 SUPERFAMILY SSF110710 7 185 1.49E-77 T 01-11-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like DOE78_23745 162cd1fa92bd4e5080ca143c39cb12a2 191 Gene3D G3DSA:3.40.50.10360 6 190 1.6E-79 T 01-11-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 Pfam PF00672 HAMP domain 186 233 7.6E-11 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 SMART SM00388 238 304 2.2E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.5E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 1.5E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 1.5E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 1.5E-17 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 9.1E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 Gene3D G3DSA:1.20.1480.50 152 242 1.2E-12 T 01-11-2018 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 2.9E-25 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 Gene3D G3DSA:1.10.287.130 243 301 8.7E-58 T 01-11-2018 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 Gene3D G3DSA:3.30.565.10 302 457 8.7E-58 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 SUPERFAMILY SSF55874 294 458 1.18E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 SMART SM00304 185 237 5.5E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 SUPERFAMILY SSF47384 221 303 1.2E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 SUPERFAMILY SSF158472 186 234 2.09E-9 T 01-11-2018 DOE78_03315 6e13e6e1f34857c0c9ad757b5a5c28e6 459 SMART SM00387 348 458 1.1E-33 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_17955 2ec6878229c6418dadc862db834bc5cd 267 Pfam PF13614 AAA domain 3 169 5.6E-26 T 01-11-2018 IPR025669 AAA domain DOE78_17955 2ec6878229c6418dadc862db834bc5cd 267 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 264 1.8E-126 T 01-11-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 DOE78_17955 2ec6878229c6418dadc862db834bc5cd 267 PIRSF PIRSF003092 1 267 1.4E-96 T 01-11-2018 IPR025501 ATP binding protein MinD DOE78_17955 2ec6878229c6418dadc862db834bc5cd 267 SUPERFAMILY SSF52540 1 262 2.5E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17955 2ec6878229c6418dadc862db834bc5cd 267 Gene3D G3DSA:3.40.50.300 1 256 2.2E-71 T 01-11-2018 DOE78_02235 6626a1a1c0e40466cc8ebb33a23db0ff 132 Pfam PF06803 Protein of unknown function (DUF1232) 37 73 9.2E-14 T 01-11-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 DOE78_01050 25e1bca7476b5536b92c8d56bc48a21f 124 SUPERFAMILY SSF52821 8 100 3.7E-8 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01050 25e1bca7476b5536b92c8d56bc48a21f 124 Gene3D G3DSA:3.40.250.10 31 106 3.1E-7 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_09865 31065b4f63680c916a03f25e0a84a19a 343 SUPERFAMILY SSF50199 92 226 1.7E-25 T 01-11-2018 DOE78_09865 31065b4f63680c916a03f25e0a84a19a 343 SMART SM00318 95 224 1.8E-15 T 01-11-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DOE78_09865 31065b4f63680c916a03f25e0a84a19a 343 Gene3D G3DSA:2.40.50.90 92 230 8.8E-33 T 01-11-2018 IPR035437 SNase-like, OB-fold superfamily DOE78_09865 31065b4f63680c916a03f25e0a84a19a 343 Pfam PF00565 Staphylococcal nuclease homologue 121 223 6.2E-14 T 01-11-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DOE78_06660 3142c1e9ad951b023b2cc676b86cf252 264 Pfam PF13743 Thioredoxin 1 192 1.4E-76 T 01-11-2018 DOE78_06660 3142c1e9ad951b023b2cc676b86cf252 264 Gene3D G3DSA:1.10.472.60 40 161 6.4E-35 T 01-11-2018 DOE78_06660 3142c1e9ad951b023b2cc676b86cf252 264 Gene3D G3DSA:3.40.30.10 2 192 6.4E-35 T 01-11-2018 DOE78_06660 3142c1e9ad951b023b2cc676b86cf252 264 SUPERFAMILY SSF52833 2 198 7.97E-29 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_21290 d2e13df79abe6313b280d03741190903 1013 SUPERFAMILY SSF82866 181 341 3.01E-32 T 01-11-2018 DOE78_21290 d2e13df79abe6313b280d03741190903 1013 Gene3D G3DSA:1.10.287.950 471 609 1.8E-5 T 01-11-2018 DOE78_21290 d2e13df79abe6313b280d03741190903 1013 Pfam PF03176 MMPL family 715 1007 2.3E-46 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DOE78_21290 d2e13df79abe6313b280d03741190903 1013 Pfam PF03176 MMPL family 46 366 9.9E-60 T 01-11-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DOE78_21290 d2e13df79abe6313b280d03741190903 1013 SUPERFAMILY SSF82866 784 1006 4.19E-31 T 01-11-2018 DOE78_21290 d2e13df79abe6313b280d03741190903 1013 Gene3D G3DSA:1.20.1640.10 794 1003 9.9E-9 T 01-11-2018 DOE78_21290 d2e13df79abe6313b280d03741190903 1013 Gene3D G3DSA:1.20.1640.10 157 348 7.4E-12 T 01-11-2018 DOE78_11795 057a2fdda5094328cc2fbbb6b8ee1ace 151 SUPERFAMILY SSF55961 1 144 4.76E-32 T 01-11-2018 DOE78_11795 057a2fdda5094328cc2fbbb6b8ee1ace 151 Gene3D G3DSA:3.30.530.20 1 151 6.2E-36 T 01-11-2018 IPR023393 START-like domain superfamily DOE78_11795 057a2fdda5094328cc2fbbb6b8ee1ace 151 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 144 6.2E-29 T 01-11-2018 IPR010419 Carbon monoxide dehydrogenase subunit G DOE78_18765 358f04b7b82d35d1363fbb30d9dc7f38 177 Gene3D G3DSA:2.160.10.10 14 176 3.2E-40 T 01-11-2018 DOE78_18765 358f04b7b82d35d1363fbb30d9dc7f38 177 SUPERFAMILY SSF51161 28 170 9.84E-37 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_18765 358f04b7b82d35d1363fbb30d9dc7f38 177 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 114 148 7.0E-13 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_06055 c1dfb58c42e1338197dd4c7bdb630d35 244 SMART SM00849 18 211 6.9E-10 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_06055 c1dfb58c42e1338197dd4c7bdb630d35 244 Gene3D G3DSA:3.60.15.10 1 244 2.5E-83 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_06055 c1dfb58c42e1338197dd4c7bdb630d35 244 Pfam PF12706 Beta-lactamase superfamily domain 31 211 1.9E-20 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_06055 c1dfb58c42e1338197dd4c7bdb630d35 244 SUPERFAMILY SSF56281 1 244 1.24E-54 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_12625 6d6f86dd9b1bb903cbd9534fea343194 247 SUPERFAMILY SSF52141 40 243 7.85E-10 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_12625 6d6f86dd9b1bb903cbd9534fea343194 247 ProDom PD315856 ORF119 CPE0798 YOXB 9 244 1.0E-49 T 01-11-2018 IPR020530 Uncharacterised protein family, YoxB DOE78_15950 df102e6399c8db545570cf985bb0c048 278 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 41.739 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DOE78_15950 df102e6399c8db545570cf985bb0c048 278 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 3.5E-110 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DOE78_15950 df102e6399c8db545570cf985bb0c048 278 PIRSF PIRSF000388 1 266 7.3E-107 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DOE78_15950 df102e6399c8db545570cf985bb0c048 278 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 6 263 5.6E-108 T 01-11-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DOE78_15950 df102e6399c8db545570cf985bb0c048 278 Gene3D G3DSA:3.20.20.60 2 274 4.1E-113 T 01-11-2018 DOE78_15950 df102e6399c8db545570cf985bb0c048 278 SUPERFAMILY SSF51621 3 263 1.33E-104 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DOE78_06570 13129bea4001b88e92d5d7cc23f20aba 321 SUPERFAMILY SSF161098 94 307 9.68E-20 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06570 13129bea4001b88e92d5d7cc23f20aba 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 319 1.4E-43 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_06570 13129bea4001b88e92d5d7cc23f20aba 321 Gene3D G3DSA:1.10.3720.10 85 313 1.5E-21 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 30 72 6.1E-24 T 01-11-2018 IPR014248 Spore coat assembly protein SafA DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 Pfam PF01476 LysM domain 28 72 4.3E-16 T 01-11-2018 IPR018392 LysM domain DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 Gene3D G3DSA:3.40.33.10 72 204 9.4E-50 T 01-11-2018 IPR035940 CAP superfamily DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 Pfam PF00188 Cysteine-rich secretory protein family 86 201 1.3E-23 T 01-11-2018 IPR014044 CAP domain DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 SUPERFAMILY SSF55797 77 201 1.96E-29 T 01-11-2018 IPR035940 CAP superfamily DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 SMART SM00257 27 72 4.3E-16 T 01-11-2018 IPR018392 LysM domain DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 SUPERFAMILY SSF54106 26 72 4.05E-12 T 01-11-2018 DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 Gene3D G3DSA:3.10.350.10 25 71 1.6E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_03210 853c39b2a34805ee74cde8697d93a6b5 204 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 79 202 5.2E-63 T 01-11-2018 IPR014258 CAP domain, YkwD-like DOE78_10230 3409aadda5df9e40707bc5b2711efd53 102 Gene3D G3DSA:1.10.10.10 2 102 2.9E-23 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10230 3409aadda5df9e40707bc5b2711efd53 102 SUPERFAMILY SSF46785 3 100 3.47E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10230 3409aadda5df9e40707bc5b2711efd53 102 Pfam PF03551 Transcriptional regulator PadR-like family 18 84 3.8E-20 T 01-11-2018 IPR005149 Transcription regulator PadR, N-terminal DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 61 - T 01-11-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 33.585 T 01-11-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 SMART SM00851 14 107 5.7E-22 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 PIRSF PIRSF006614 1 139 8.6E-61 T 01-11-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 SUPERFAMILY SSF52335 2 132 5.8E-52 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 Gene3D G3DSA:3.40.50.1380 1 137 7.7E-55 T 01-11-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 2 124 8.9E-58 T 01-11-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DOE78_15975 1cb90d662e9dbb34361a70fda6fe605b 140 Pfam PF02142 MGS-like domain 14 107 1.9E-17 T 01-11-2018 IPR011607 Methylglyoxal synthase-like domain DOE78_06010 ad5dbcf1057e6dcd26e71514ab5c2682 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 342 1.1E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_06010 ad5dbcf1057e6dcd26e71514ab5c2682 348 SUPERFAMILY SSF55874 217 341 4.98E-21 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_06010 ad5dbcf1057e6dcd26e71514ab5c2682 348 PIRSF PIRSF037434 12 63 440.0 T 01-11-2018 IPR017205 Signal transduction histidine kinase, ChrS DOE78_06010 ad5dbcf1057e6dcd26e71514ab5c2682 348 PIRSF PIRSF037434 104 347 5.2E-51 T 01-11-2018 IPR017205 Signal transduction histidine kinase, ChrS DOE78_06010 ad5dbcf1057e6dcd26e71514ab5c2682 348 Pfam PF07730 Histidine kinase 147 214 9.6E-19 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_06010 ad5dbcf1057e6dcd26e71514ab5c2682 348 SMART SM00387 251 344 8.3E-11 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_06010 ad5dbcf1057e6dcd26e71514ab5c2682 348 Gene3D G3DSA:3.30.565.10 212 344 5.5E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10570 1a81d9501baf04f734dbd66095c9b9fc 459 SUPERFAMILY SSF53383 103 457 2.04E-83 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_10570 1a81d9501baf04f734dbd66095c9b9fc 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 8.9E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_10570 1a81d9501baf04f734dbd66095c9b9fc 459 Gene3D G3DSA:3.40.640.10 90 452 4.6E-116 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_10570 1a81d9501baf04f734dbd66095c9b9fc 459 Pfam PF00155 Aminotransferase class I and II 103 447 2.5E-26 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_10570 1a81d9501baf04f734dbd66095c9b9fc 459 SMART SM00345 18 77 5.5E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_10570 1a81d9501baf04f734dbd66095c9b9fc 459 Gene3D G3DSA:1.10.10.10 5 78 1.1E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10570 1a81d9501baf04f734dbd66095c9b9fc 459 SUPERFAMILY SSF46785 7 82 2.86E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_23965 4ce81a91d2d923097368b7fd6b40862d 282 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 278 49.901 T 01-11-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 DOE78_23965 4ce81a91d2d923097368b7fd6b40862d 282 Gene3D G3DSA:3.30.930.10 4 282 9.1E-77 T 01-11-2018 DOE78_23965 4ce81a91d2d923097368b7fd6b40862d 282 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 183 3.3E-14 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DOE78_23965 4ce81a91d2d923097368b7fd6b40862d 282 SUPERFAMILY SSF55681 7 263 1.16E-67 T 01-11-2018 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 SUPERFAMILY SSF53383 6 399 1.48E-123 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 Gene3D G3DSA:3.40.640.10 62 310 2.9E-152 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 Gene3D G3DSA:3.90.1150.10 27 389 2.9E-152 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 Pfam PF00202 Aminotransferase class-III 20 399 8.1E-134 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 227 264 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 PIRSF PIRSF000521 2 164 2.0E-7 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 PIRSF PIRSF000521 180 401 1.2E-32 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 9 399 3.0E-166 T 01-11-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_10165 92206ab4fa0a7f3ab5ad73347fbae15f 401 Hamap MF_01689 Ornithine aminotransferase [rocD]. 8 400 67.098 T 01-11-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 Gene3D G3DSA:3.30.60.100 146 181 1.0E-21 T 01-11-2018 DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 30.836 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 Pfam PF11967 Recombination protein O N terminal 1 77 9.3E-25 T 01-11-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 243 2.9E-82 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 Gene3D G3DSA:2.40.50.140 2 81 2.9E-14 T 01-11-2018 DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 Gene3D G3DSA:1.20.1440.120 88 225 1.0E-21 T 01-11-2018 DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 SUPERFAMILY SSF57863 81 232 4.18E-50 T 01-11-2018 IPR037278 ARFGAP/RecO-like zinc finger DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 Pfam PF02565 Recombination protein O C terminal 83 237 2.0E-43 T 01-11-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DOE78_17380 83bbb03a993cc4c3cdb7c93d8cc2c7c5 253 SUPERFAMILY SSF50249 1 77 2.06E-19 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_06235 5663c3f60a6bb7b070ef633b33e5c7dd 617 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 535 5.0E-169 T 01-11-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DOE78_06235 5663c3f60a6bb7b070ef633b33e5c7dd 617 Pfam PF13537 Glutamine amidotransferase domain 48 169 1.0E-45 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain DOE78_06235 5663c3f60a6bb7b070ef633b33e5c7dd 617 SUPERFAMILY SSF56235 1 227 6.09E-61 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_06235 5663c3f60a6bb7b070ef633b33e5c7dd 617 Gene3D G3DSA:3.60.20.10 2 185 4.5E-62 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_06235 5663c3f60a6bb7b070ef633b33e5c7dd 617 PIRSF PIRSF001589 1 614 1.8E-142 T 01-11-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DOE78_06235 5663c3f60a6bb7b070ef633b33e5c7dd 617 SUPERFAMILY SSF52402 232 577 1.91E-69 T 01-11-2018 DOE78_06235 5663c3f60a6bb7b070ef633b33e5c7dd 617 Pfam PF00733 Asparagine synthase 243 588 1.1E-91 T 01-11-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DOE78_13045 6214f4900b8d260c3b68660e00f07788 407 Pfam PF02597 ThiS family 14 65 1.6E-4 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DOE78_13045 6214f4900b8d260c3b68660e00f07788 407 SUPERFAMILY SSF69572 71 397 4.45E-87 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DOE78_13045 6214f4900b8d260c3b68660e00f07788 407 Gene3D G3DSA:3.40.50.720 68 319 1.6E-73 T 01-11-2018 DOE78_13045 6214f4900b8d260c3b68660e00f07788 407 Pfam PF00899 ThiF family 74 310 1.2E-58 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DOE78_13045 6214f4900b8d260c3b68660e00f07788 407 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 2.9E-15 T 01-11-2018 IPR010035 ThiS, thiamine-biosynthesis DOE78_13045 6214f4900b8d260c3b68660e00f07788 407 SUPERFAMILY SSF54285 2 65 9.94E-13 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE78_13045 6214f4900b8d260c3b68660e00f07788 407 Gene3D G3DSA:3.10.20.30 2 66 2.1E-13 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 Gene3D G3DSA:3.40.50.300 1 89 3.3E-18 T 01-11-2018 DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 Gene3D G3DSA:3.40.50.300 252 509 1.6E-47 T 01-11-2018 DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 Pfam PF00005 ABC transporter 21 88 3.8E-14 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 Pfam PF00005 ABC transporter 100 132 2.4E-5 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 SUPERFAMILY SSF52540 4 188 1.41E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 SMART SM00382 316 480 1.9E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 SMART SM00382 29 184 6.4E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 SUPERFAMILY SSF52540 278 481 2.52E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 Pfam PF12848 ABC transporter 172 265 1.7E-6 T 01-11-2018 IPR032781 ABC-transporter extension domain DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 Pfam PF00005 ABC transporter 308 435 2.0E-21 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14140 69619a6acb55aac7248eb8af0d83b7f2 541 Gene3D G3DSA:3.40.50.300 90 229 1.9E-29 T 01-11-2018 DOE78_20375 c91b29718eb458cbd068fb30b45b269e 421 SUPERFAMILY SSF103473 4 403 7.59E-57 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_20375 c91b29718eb458cbd068fb30b45b269e 421 Pfam PF07690 Major Facilitator Superfamily 22 367 1.4E-38 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_20375 c91b29718eb458cbd068fb30b45b269e 421 Gene3D G3DSA:1.20.1250.20 3 408 1.3E-54 T 01-11-2018 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 Gene3D G3DSA:1.10.10.60 398 449 4.2E-15 T 01-11-2018 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 Pfam PF12833 Helix-turn-helix domain 426 501 8.5E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 SUPERFAMILY SSF46689 401 450 1.08E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 SUPERFAMILY SSF52172 2 138 1.04E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_22680 c90072bacbbe71697796f3dab55908af 503 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 484 500 9.2E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 469 484 9.2E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 SMART SM00448 2 115 5.8E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 SUPERFAMILY SSF46689 453 501 7.62E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 Pfam PF00072 Response regulator receiver domain 4 115 2.6E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 454 496 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 Gene3D G3DSA:1.10.10.60 450 503 1.9E-17 T 01-11-2018 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 Gene3D G3DSA:3.40.50.2300 2 141 1.9E-34 T 01-11-2018 DOE78_22680 c90072bacbbe71697796f3dab55908af 503 SMART SM00342 417 500 1.6E-27 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 Gene3D G3DSA:1.10.10.10 1 66 5.1E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 SUPERFAMILY SSF64288 54 234 5.5E-45 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 SMART SM00866 92 231 6.4E-38 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 8.2E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.9E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.9E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 SMART SM00345 7 66 1.2E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 Gene3D G3DSA:3.40.1410.10 80 235 4.9E-39 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 Pfam PF07702 UTRA domain 93 231 2.7E-34 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_21470 a4eb1e83d8ca2b0e088a52419fbd1f3e 239 SUPERFAMILY SSF46785 3 70 3.85E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12660 c97b66dac998de80987acf8906111e4f 327 Gene3D G3DSA:3.20.20.70 1 327 4.7E-109 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12660 c97b66dac998de80987acf8906111e4f 327 SMART SM01240 3 327 8.4E-113 T 01-11-2018 DOE78_12660 c97b66dac998de80987acf8906111e4f 327 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 312 2.4E-68 T 01-11-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DOE78_12660 c97b66dac998de80987acf8906111e4f 327 Hamap MF_01511 GMP reductase [guaC]. 2 325 64.278 T 01-11-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DOE78_12660 c97b66dac998de80987acf8906111e4f 327 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 4 324 1.5E-198 T 01-11-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DOE78_12660 c97b66dac998de80987acf8906111e4f 327 SUPERFAMILY SSF51412 3 315 1.16E-90 T 01-11-2018 DOE78_12660 c97b66dac998de80987acf8906111e4f 327 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 165 177 - T 01-11-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DOE78_12660 c97b66dac998de80987acf8906111e4f 327 PIRSF PIRSF036500 1 326 9.2E-194 T 01-11-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 PIRSF PIRSF000770 4 239 1.1E-77 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 Pfam PF04545 Sigma-70, region 4 180 233 4.0E-17 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 SUPERFAMILY SSF88946 25 131 1.57E-35 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 6.3E-36 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 Gene3D G3DSA:1.20.120.1810 29 131 1.6E-25 T 01-11-2018 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 8 239 1.1E-134 T 01-11-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 SUPERFAMILY SSF88659 143 237 3.55E-21 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 Gene3D G3DSA:1.10.10.10 168 239 1.7E-13 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 7.1E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 7.1E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 7.1E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 7.1E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07765 52f897a6e6cba0bc4d2082ca971ac075 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_11490 4db8b1d34f22b19947bbf5ca22392223 767 TIGRFAM TIGR03238 dnd_assoc_3: DNA phosphorothioation-dependent restriction protein DptF 230 766 4.5E-155 T 01-11-2018 IPR017647 DNA phosphorothioation-dependent restriction protein DptF DOE78_11490 4db8b1d34f22b19947bbf5ca22392223 767 Pfam PF13643 Domain of unknown function (DUF4145) 26 108 5.2E-8 T 01-11-2018 IPR025285 Domain of unknown function DUF4145 DOE78_18310 7801b841c80f57113ef120b2d3412a6b 248 SUPERFAMILY SSF55315 2 95 2.24E-22 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_18310 7801b841c80f57113ef120b2d3412a6b 248 Gene3D G3DSA:3.30.1330.30 2 97 7.9E-23 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_18310 7801b841c80f57113ef120b2d3412a6b 248 SUPERFAMILY SSF75217 105 246 8.5E-38 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases DOE78_18310 7801b841c80f57113ef120b2d3412a6b 248 Gene3D G3DSA:3.40.1280.10 101 248 4.4E-47 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE78_18310 7801b841c80f57113ef120b2d3412a6b 248 SMART SM00967 31 99 1.8E-13 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DOE78_18310 7801b841c80f57113ef120b2d3412a6b 248 Pfam PF00588 SpoU rRNA Methylase family 106 244 3.2E-35 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DOE78_18310 7801b841c80f57113ef120b2d3412a6b 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 97 9.6E-12 T 01-11-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 SUPERFAMILY SSF56300 29 372 7.78E-77 T 01-11-2018 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 Gene3D G3DSA:3.60.21.10 29 375 2.0E-110 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 PRINTS PR01607 Apyrase family signature 261 284 3.4E-18 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 PRINTS PR01607 Apyrase family signature 302 322 3.4E-18 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 PRINTS PR01607 Apyrase family signature 232 249 3.4E-18 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 PRINTS PR01607 Apyrase family signature 32 50 3.4E-18 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_18580 2bcd1275bc97ac4819ee39a9305ea0ac 378 Pfam PF00149 Calcineurin-like phosphoesterase 34 278 6.2E-13 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_21005 30765cb593804b84c2eff74432732344 105 SUPERFAMILY SSF52833 2 102 1.12E-45 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_21005 30765cb593804b84c2eff74432732344 105 PIRSF PIRSF010603 1 103 3.8E-47 T 01-11-2018 IPR009190 Protein of unknown function DUF1462 DOE78_21005 30765cb593804b84c2eff74432732344 105 Gene3D G3DSA:3.40.30.30 1 102 1.2E-42 T 01-11-2018 IPR038218 YuzD-like superfamily DOE78_21005 30765cb593804b84c2eff74432732344 105 Pfam PF07315 Protein of unknown function (DUF1462) 5 97 2.1E-44 T 01-11-2018 IPR009190 Protein of unknown function DUF1462 DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 Pfam PF02254 TrkA-N domain 404 512 4.9E-10 T 01-11-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 Gene3D G3DSA:3.30.70.1450 533 616 3.0E-21 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 Pfam PF00999 Sodium/hydrogen exchanger family 11 388 7.0E-75 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 SUPERFAMILY SSF116726 541 611 6.93E-11 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 Gene3D G3DSA:1.20.1530.20 5 396 4.7E-72 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 Pfam PF02080 TrkA-C domain 555 612 1.1E-10 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 Gene3D G3DSA:3.40.50.720 397 531 4.4E-13 T 01-11-2018 DOE78_06710 4301892f56ac18e65c20c43255a96d03 616 SUPERFAMILY SSF51735 403 515 6.56E-12 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18320 afcaed4d3a3aaa6982d80511dd799851 361 Gene3D G3DSA:3.40.630.10 12 345 1.2E-137 T 01-11-2018 DOE78_18320 afcaed4d3a3aaa6982d80511dd799851 361 Gene3D G3DSA:2.40.30.40 77 164 1.2E-137 T 01-11-2018 IPR023367 Peptidase M42, domain 2 DOE78_18320 afcaed4d3a3aaa6982d80511dd799851 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 5.6E-118 T 01-11-2018 IPR008007 Peptidase M42 DOE78_18320 afcaed4d3a3aaa6982d80511dd799851 361 SUPERFAMILY SSF101821 73 182 3.05E-35 T 01-11-2018 DOE78_18320 afcaed4d3a3aaa6982d80511dd799851 361 PIRSF PIRSF001123 4 361 6.7E-149 T 01-11-2018 IPR008007 Peptidase M42 DOE78_18320 afcaed4d3a3aaa6982d80511dd799851 361 SUPERFAMILY SSF53187 7 357 3.67E-71 T 01-11-2018 DOE78_14040 34d8346421d33025c4db6d3a35c877fc 148 Pfam PF10787 Uncharacterised protein from bacillus cereus group 1 138 4.5E-52 T 01-11-2018 IPR019723 Uncharacterised protein, YfmQ DOE78_12020 5098f1c379607945f539381b73f0c37b 266 SMART SM00382 27 223 3.4E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_12020 5098f1c379607945f539381b73f0c37b 266 SUPERFAMILY SSF52540 11 245 2.01E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12020 5098f1c379607945f539381b73f0c37b 266 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_12020 5098f1c379607945f539381b73f0c37b 266 Pfam PF00005 ABC transporter 19 173 2.6E-24 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_12020 5098f1c379607945f539381b73f0c37b 266 Gene3D G3DSA:3.40.50.300 1 261 1.1E-76 T 01-11-2018 DOE78_23455 fa7bb6450d170dcdf1b77e0c3a787c8e 597 Gene3D G3DSA:3.30.565.10 441 595 2.8E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_23455 fa7bb6450d170dcdf1b77e0c3a787c8e 597 Pfam PF06580 Histidine kinase 388 466 7.0E-24 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_23455 fa7bb6450d170dcdf1b77e0c3a787c8e 597 Gene3D G3DSA:1.10.8.500 322 375 3.3E-5 T 01-11-2018 DOE78_23455 fa7bb6450d170dcdf1b77e0c3a787c8e 597 SMART SM00304 323 375 3.8E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_23455 fa7bb6450d170dcdf1b77e0c3a787c8e 597 SUPERFAMILY SSF55874 442 589 2.75E-12 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_23455 fa7bb6450d170dcdf1b77e0c3a787c8e 597 Gene3D G3DSA:3.30.450.20 177 299 3.8E-9 T 01-11-2018 DOE78_23455 fa7bb6450d170dcdf1b77e0c3a787c8e 597 SUPERFAMILY SSF158472 324 374 1.44E-7 T 01-11-2018 DOE78_02130 9635e3ccbf7f28404570299d0b37e972 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 262 8.0E-39 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_02130 9635e3ccbf7f28404570299d0b37e972 278 Gene3D G3DSA:3.40.190.10 137 232 2.7E-52 T 01-11-2018 DOE78_02130 9635e3ccbf7f28404570299d0b37e972 278 SUPERFAMILY SSF53850 5 263 7.61E-49 T 01-11-2018 DOE78_02130 9635e3ccbf7f28404570299d0b37e972 278 Gene3D G3DSA:3.40.190.10 37 260 2.7E-52 T 01-11-2018 DOE78_02130 9635e3ccbf7f28404570299d0b37e972 278 SMART SM00062 37 268 1.7E-34 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_15825 96995d3f61262e65e6d11e3b715ced74 101 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 97 24.345 T 01-11-2018 IPR011229 Cell cycle protein GpsB DOE78_15825 96995d3f61262e65e6d11e3b715ced74 101 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 1.2E-15 T 01-11-2018 IPR019933 DivIVA domain DOE78_15825 96995d3f61262e65e6d11e3b715ced74 101 Pfam PF05103 DivIVA protein 8 65 2.8E-18 T 01-11-2018 IPR007793 DivIVA family DOE78_15825 96995d3f61262e65e6d11e3b715ced74 101 PIRSF PIRSF029938 1 101 1.4E-40 T 01-11-2018 IPR011229 Cell cycle protein GpsB DOE78_20515 25e441646fdbbd4ac16759e26ae98c05 364 SUPERFAMILY SSF53756 6 359 2.51E-57 T 01-11-2018 DOE78_20515 25e441646fdbbd4ac16759e26ae98c05 364 Gene3D G3DSA:3.40.50.2000 168 346 1.3E-49 T 01-11-2018 DOE78_20515 25e441646fdbbd4ac16759e26ae98c05 364 Pfam PF00534 Glycosyl transferases group 1 180 337 6.2E-24 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_20515 25e441646fdbbd4ac16759e26ae98c05 364 Pfam PF13439 Glycosyltransferase Family 4 17 172 1.7E-9 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_20515 25e441646fdbbd4ac16759e26ae98c05 364 Gene3D G3DSA:3.40.50.2000 17 355 1.3E-49 T 01-11-2018 DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 SUPERFAMILY SSF50443 325 492 5.49E-74 T 01-11-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 SUPERFAMILY SSF53743 2 323 1.94E-121 T 01-11-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 302 2.0E-127 T 01-11-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 Hamap MF_00519 L-arabinose isomerase [araA]. 1 472 65.22 T 01-11-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 Gene3D G3DSA:3.40.50.10940 1 173 1.2E-82 T 01-11-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 Pfam PF02610 L-arabinose isomerase 5 354 8.1E-180 T 01-11-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 Pfam PF11762 L-arabinose isomerase C-terminal domain 358 471 2.0E-51 T 01-11-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 DOE78_04355 c0887c57a19213c2fb2ce59cde27ff2a 492 PIRSF PIRSF001478 1 492 1.9E-253 T 01-11-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 121 8.1E-45 T 01-11-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 Gene3D G3DSA:1.10.1200.120 1 124 9.3E-42 T 01-11-2018 IPR036019 Gated mechanosensitive channel DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 SUPERFAMILY SSF81330 10 117 5.49E-34 T 01-11-2018 IPR036019 Gated mechanosensitive channel DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 01-11-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 122 23.218 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 123 3.0E-48 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 2.5E-10 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 2.5E-10 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DOE78_03070 476976265424e82b4ef76ab1b9e3bd3a 129 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.5E-10 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DOE78_14510 b4356e914fd36978d00b9b897e81bb8a 200 Gene3D G3DSA:3.40.30.10 26 200 1.6E-42 T 01-11-2018 DOE78_14510 b4356e914fd36978d00b9b897e81bb8a 200 Pfam PF02630 SCO1/SenC 31 180 5.7E-21 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14510 b4356e914fd36978d00b9b897e81bb8a 200 SUPERFAMILY SSF52833 34 197 1.21E-33 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_08130 54bb40e6e25b6596f4073de7f7321211 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 11 300 1.1E-107 T 01-11-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 DOE78_08130 54bb40e6e25b6596f4073de7f7321211 300 Gene3D G3DSA:1.10.150.130 8 101 1.5E-22 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal DOE78_08130 54bb40e6e25b6596f4073de7f7321211 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 90 3.7E-21 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DOE78_08130 54bb40e6e25b6596f4073de7f7321211 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 300 52.597 T 01-11-2018 IPR023009 Tyrosine recombinase XerC/XerD DOE78_08130 54bb40e6e25b6596f4073de7f7321211 300 SUPERFAMILY SSF56349 11 294 8.83E-58 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DOE78_08130 54bb40e6e25b6596f4073de7f7321211 300 Pfam PF00589 Phage integrase family 115 285 1.3E-49 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DOE78_08130 54bb40e6e25b6596f4073de7f7321211 300 Gene3D G3DSA:1.10.443.10 114 294 3.3E-59 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DOE78_18160 fc3aa2ea2d0bbd8fd0650c66a76a3013 325 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_18160 fc3aa2ea2d0bbd8fd0650c66a76a3013 325 SUPERFAMILY SSF52540 6 256 1.27E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18160 fc3aa2ea2d0bbd8fd0650c66a76a3013 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 323 5.2E-25 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_18160 fc3aa2ea2d0bbd8fd0650c66a76a3013 325 Gene3D G3DSA:3.40.50.300 4 325 1.5E-94 T 01-11-2018 DOE78_18160 fc3aa2ea2d0bbd8fd0650c66a76a3013 325 Pfam PF00005 ABC transporter 28 185 3.7E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_18160 fc3aa2ea2d0bbd8fd0650c66a76a3013 325 SMART SM00382 36 243 2.1E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18160 fc3aa2ea2d0bbd8fd0650c66a76a3013 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 3.7E-19 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_09240 92b267ec19fe53fb46bc4b5de2245530 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 57 1.7E-18 T 01-11-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 DOE78_09240 92b267ec19fe53fb46bc4b5de2245530 61 Pfam PF01361 Tautomerase enzyme 2 58 8.6E-17 T 01-11-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 DOE78_09240 92b267ec19fe53fb46bc4b5de2245530 61 Gene3D G3DSA:3.30.429.10 2 60 4.3E-22 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_09240 92b267ec19fe53fb46bc4b5de2245530 61 SUPERFAMILY SSF55331 2 59 9.29E-17 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 SUPERFAMILY SSF46785 7 141 7.1E-29 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 Pfam PF01047 MarR family 33 90 3.1E-14 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 Gene3D G3DSA:1.10.10.10 5 144 2.3E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 5.6E-8 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 5.6E-8 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 5.6E-8 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_22275 f3285dd34d67a1bcaf53722cb033bce8 145 SMART SM00347 26 126 1.9E-21 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_16855 3dc46880db0db2fbd0930239bd9ca7f5 452 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 442 29.741 T 01-11-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DOE78_16855 3dc46880db0db2fbd0930239bd9ca7f5 452 Pfam PF13742 OB-fold nucleic acid binding domain 8 102 6.4E-31 T 01-11-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DOE78_16855 3dc46880db0db2fbd0930239bd9ca7f5 452 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 441 6.0E-151 T 01-11-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DOE78_16855 3dc46880db0db2fbd0930239bd9ca7f5 452 Pfam PF02601 Exonuclease VII, large subunit 125 439 6.4E-99 T 01-11-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 PIRSF PIRSF001365 1 288 2.2E-96 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 01-11-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 Pfam PF00701 Dihydrodipicolinate synthetase family 4 284 7.1E-109 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 SUPERFAMILY SSF51569 2 287 6.59E-103 T 01-11-2018 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 3.2E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 3.2E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 3.2E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 3.2E-34 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 01-11-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 Gene3D G3DSA:3.20.20.70 1 288 3.5E-112 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 283 5.2E-110 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 288 63.244 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_08460 6f5deaaf88c99b33069ee8c9c75df0b6 288 SMART SM01130 3 287 3.2E-135 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_24565 8de32ce139eba98435c895f1ccedc06c 269 Pfam PF09648 YycH protein 38 253 4.6E-56 T 01-11-2018 IPR018604 Regulatory protein YycH-like GO:0016021 DOE78_24565 8de32ce139eba98435c895f1ccedc06c 269 Gene3D G3DSA:3.30.310.160 70 186 4.2E-63 T 01-11-2018 DOE78_24565 8de32ce139eba98435c895f1ccedc06c 269 Gene3D G3DSA:3.10.450.660 47 257 4.2E-63 T 01-11-2018 DOE78_08935 e6f3ad59d47de1b2c2b3a10dbe6537e7 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 303 2.0E-8 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_08935 e6f3ad59d47de1b2c2b3a10dbe6537e7 319 SUPERFAMILY SSF161098 73 301 8.9E-54 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08935 e6f3ad59d47de1b2c2b3a10dbe6537e7 319 SUPERFAMILY SSF160964 30 63 6.02E-5 T 01-11-2018 DOE78_08935 e6f3ad59d47de1b2c2b3a10dbe6537e7 319 Gene3D G3DSA:1.10.3720.10 69 310 4.0E-63 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08425 78dc065d95fe018c84587c07def2f128 323 Gene3D G3DSA:3.20.20.370 113 319 7.9E-58 T 01-11-2018 DOE78_08425 78dc065d95fe018c84587c07def2f128 323 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 43 308 7.9E-128 T 01-11-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY DOE78_08425 78dc065d95fe018c84587c07def2f128 323 Pfam PF01522 Polysaccharide deacetylase 138 240 1.5E-27 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DOE78_08425 78dc065d95fe018c84587c07def2f128 323 SUPERFAMILY SSF88713 108 308 1.16E-56 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_18035 0e880cb2c5592abc3650eac215863e1c 428 SUPERFAMILY SSF53383 4 426 1.02E-132 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_18035 0e880cb2c5592abc3650eac215863e1c 428 Pfam PF00202 Aminotransferase class-III 35 398 9.7E-79 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_18035 0e880cb2c5592abc3650eac215863e1c 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_18035 0e880cb2c5592abc3650eac215863e1c 428 Gene3D G3DSA:3.40.640.10 72 319 2.5E-184 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_18035 0e880cb2c5592abc3650eac215863e1c 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 1.8E-201 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DOE78_18035 0e880cb2c5592abc3650eac215863e1c 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 105.93 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DOE78_18035 0e880cb2c5592abc3650eac215863e1c 428 Gene3D G3DSA:3.90.1150.10 10 421 2.5E-184 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 Gene3D G3DSA:1.10.1740.10 2 71 2.2E-25 T 01-11-2018 DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 Pfam PF04542 Sigma-70 region 2 8 74 3.6E-18 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 Gene3D G3DSA:1.10.10.10 88 168 4.6E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 Pfam PF08281 Sigma-70, region 4 109 159 1.6E-12 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 165 2.8E-33 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 01-11-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 SUPERFAMILY SSF88946 4 84 3.92E-23 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_16305 5fee75f32d703cd92694e8a361be621f 175 SUPERFAMILY SSF88659 98 165 4.67E-15 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 537 5.2E-9 T 01-11-2018 IPR032091 Maltogenic Amylase, C-terminal DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 Pfam PF00128 Alpha amylase, catalytic domain 28 362 1.6E-128 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 Gene3D G3DSA:2.60.40.1180 467 541 1.4E-18 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 SUPERFAMILY SSF51011 466 540 1.12E-15 T 01-11-2018 DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 Gene3D G3DSA:3.20.20.80 1 109 7.3E-50 T 01-11-2018 DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 SUPERFAMILY SSF51445 4 463 2.11E-156 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 Gene3D G3DSA:3.90.400.10 110 171 6.6E-32 T 01-11-2018 DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 Gene3D G3DSA:3.20.20.80 172 466 1.1E-123 T 01-11-2018 DOE78_12190 831ac026b2458d209db8cd07b737efb8 541 SMART SM00642 13 405 2.8E-160 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_07965 3bbb024f30860ca161fa017d1c69bed6 26 Pfam PF08183 Stage V sporulation protein family 1 25 3.6E-17 T 01-11-2018 IPR012609 Sporulation stage V, protein M DOE78_20495 6e515f92deb545988d7b61a1133ab5ab 400 Pfam PF00534 Glycosyl transferases group 1 225 382 7.8E-29 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_20495 6e515f92deb545988d7b61a1133ab5ab 400 SUPERFAMILY SSF53756 2 399 2.24E-46 T 01-11-2018 DOE78_20495 6e515f92deb545988d7b61a1133ab5ab 400 Gene3D G3DSA:3.40.50.2000 222 387 1.1E-31 T 01-11-2018 DOE78_20495 6e515f92deb545988d7b61a1133ab5ab 400 Gene3D G3DSA:3.40.50.2000 2 221 3.1E-8 T 01-11-2018 DOE78_03570 be5e713692424646bbae15b0d37deaae 283 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 120 261 1.2E-20 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_03570 be5e713692424646bbae15b0d37deaae 283 Gene3D G3DSA:1.10.340.30 111 230 1.3E-53 T 01-11-2018 DOE78_03570 be5e713692424646bbae15b0d37deaae 283 Gene3D G3DSA:1.10.1670.40 231 280 1.3E-53 T 01-11-2018 DOE78_03570 be5e713692424646bbae15b0d37deaae 283 SUPERFAMILY SSF48150 105 281 5.06E-43 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DOE78_03570 be5e713692424646bbae15b0d37deaae 283 SMART SM00478 123 283 2.5E-22 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_20090 880f35976151428d7ff55e47f0d66fdf 428 Pfam PF01547 Bacterial extracellular solute-binding protein 42 339 5.6E-35 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_20090 880f35976151428d7ff55e47f0d66fdf 428 Gene3D G3DSA:3.40.190.10 50 384 3.5E-110 T 01-11-2018 DOE78_20090 880f35976151428d7ff55e47f0d66fdf 428 SUPERFAMILY SSF53850 13 424 2.87E-80 T 01-11-2018 DOE78_20090 880f35976151428d7ff55e47f0d66fdf 428 Gene3D G3DSA:3.40.190.10 147 415 3.5E-110 T 01-11-2018 DOE78_02905 c2a29d5951cce214ce7d351b61784726 400 Gene3D G3DSA:3.40.1710.10 54 163 2.9E-7 T 01-11-2018 DOE78_02905 c2a29d5951cce214ce7d351b61784726 400 Pfam PF12698 ABC-2 family transporter protein 34 394 4.0E-40 T 01-11-2018 DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 553 1.4E-197 T 01-11-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 Gene3D G3DSA:3.10.20.580 449 555 4.9E-38 T 01-11-2018 DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 SMART SM00849 21 216 5.2E-26 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 363 409 2.8E-10 T 01-11-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 Gene3D G3DSA:3.60.15.10 11 436 9.1E-166 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 Pfam PF00753 Metallo-beta-lactamase superfamily 18 167 7.3E-15 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 SUPERFAMILY SSF56281 9 424 6.6E-85 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 44.47 T 01-11-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 Gene3D G3DSA:3.40.50.10710 208 365 9.1E-166 T 01-11-2018 DOE78_08465 f5c5ee61b5576d50f6a77cc271d58003 555 PIRSF PIRSF004803 1 555 6.1E-216 T 01-11-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DOE78_18135 040c947db0aec6e65a585225a2f53be3 301 Gene3D G3DSA:3.20.10.10 127 288 3.2E-53 T 01-11-2018 DOE78_18135 040c947db0aec6e65a585225a2f53be3 301 SUPERFAMILY SSF56752 4 284 3.01E-91 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DOE78_18135 040c947db0aec6e65a585225a2f53be3 301 Gene3D G3DSA:3.30.470.10 1 126 1.0E-47 T 01-11-2018 DOE78_18135 040c947db0aec6e65a585225a2f53be3 301 Pfam PF01063 Amino-transferase class IV 32 257 4.8E-58 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DOE78_18135 040c947db0aec6e65a585225a2f53be3 301 ProSitePatterns PS00770 Aminotransferases class-IV signature. 185 214 - T 01-11-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DOE78_18135 040c947db0aec6e65a585225a2f53be3 301 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 7 292 2.4E-101 T 01-11-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 394 475 4.7E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 751 919 1.05E-9 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 573 718 2.6E-5 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 1101 1204 1.22E-6 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 39 209 2.97E-9 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 1200 1375 2.12E-10 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 394 565 4.17E-8 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 929 1099 2.52E-11 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 1382 1550 2.65E-8 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 1561 1646 1.9E-8 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 1017 1103 1.1E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 572 655 7.0E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 38 124 5.7E-10 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 305 393 4.8E-8 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 214 304 5.2E-7 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 1379 1466 2.1E-8 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 1197 1286 2.0E-9 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 1107 1195 3.0E-8 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 926 1015 6.8E-10 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 1469 1555 2.6E-6 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 750 835 2.1E-6 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 1288 1377 8.5E-10 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 125 213 3.0E-7 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:2.60.40.10 837 923 1.3E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 217 379 1.1E-8 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 927 1003 2.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 749 823 6.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 1560 1633 19.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 125 200 64.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 482 556 3.8 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 1107 1183 12.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 37 110 0.087 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 1018 1092 1.9 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 215 289 0.071 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 1467 1544 19.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 838 912 2.2 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 571 645 19.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 1198 1274 4.6 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 393 467 7.8 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 1289 1365 0.92 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 1380 1456 2.3 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 304 378 0.49 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SMART SM00060 660 734 21.0 T 01-11-2018 IPR003961 Fibronectin type III GO:0005515 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:3.30.1920.20 1663 1731 3.8E-6 T 01-11-2018 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:3.30.1920.20 1907 1976 9.9E-7 T 01-11-2018 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 Gene3D G3DSA:3.30.1920.20 1743 1812 3.0E-10 T 01-11-2018 DOE78_22790 dbc948a4a01643e3a30be76334f1fdb3 2154 SUPERFAMILY SSF49265 1567 1650 8.69E-6 T 01-11-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DOE78_05195 16afd66c7de2a6298c7002fb3c2d0543 532 Gene3D G3DSA:3.90.76.10 61 207 5.2E-167 T 01-11-2018 DOE78_05195 16afd66c7de2a6298c7002fb3c2d0543 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 451 1.2E-107 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_05195 16afd66c7de2a6298c7002fb3c2d0543 532 Gene3D G3DSA:3.10.105.10 290 507 5.2E-167 T 01-11-2018 DOE78_05195 16afd66c7de2a6298c7002fb3c2d0543 532 Gene3D G3DSA:3.40.190.10 208 520 5.2E-167 T 01-11-2018 DOE78_05195 16afd66c7de2a6298c7002fb3c2d0543 532 SUPERFAMILY SSF53850 46 529 1.83E-152 T 01-11-2018 DOE78_05195 16afd66c7de2a6298c7002fb3c2d0543 532 PIRSF PIRSF002741 3 530 6.9E-135 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DOE78_05195 16afd66c7de2a6298c7002fb3c2d0543 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 95 117 - T 01-11-2018 IPR023765 Solute-binding protein family 5, conserved site DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 Pfam PF01189 16S rRNA methyltransferase RsmB/F 246 445 4.2E-62 T 01-11-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 Gene3D G3DSA:3.40.50.150 146 446 7.4E-86 T 01-11-2018 DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 Pfam PF01029 NusB family 6 129 1.2E-30 T 01-11-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 11 447 2.2E-157 T 01-11-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 228 242 4.2E-32 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 257 267 4.2E-32 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 429 446 4.2E-32 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 325 337 4.2E-32 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 375 391 4.2E-32 T 01-11-2018 IPR023267 RNA (C5-cytosine) methyltransferase DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 SUPERFAMILY SSF48013 4 131 1.57E-36 T 01-11-2018 IPR035926 NusB-like superfamily DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 SUPERFAMILY SSF53335 140 447 1.19E-72 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 324 335 - T 01-11-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DOE78_07930 e9700d826d37b7aa632cfe8ce592447e 448 Gene3D G3DSA:1.10.940.10 1 145 6.0E-41 T 01-11-2018 IPR035926 NusB-like superfamily DOE78_14865 2a71b283c3b3b0782d62c180ae5f4d01 263 Gene3D G3DSA:3.60.160.10 1 251 6.8E-106 T 01-11-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily DOE78_14865 2a71b283c3b3b0782d62c180ae5f4d01 263 SUPERFAMILY SSF51219 6 245 5.75E-87 T 01-11-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily DOE78_14865 2a71b283c3b3b0782d62c180ae5f4d01 263 Pfam PF01987 Mitochondrial biogenesis AIM24 8 225 4.4E-72 T 01-11-2018 IPR002838 Mitochondrial biogenesis protein AIM24 DOE78_14865 2a71b283c3b3b0782d62c180ae5f4d01 263 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 8 226 1.9E-36 T 01-11-2018 IPR002838 Mitochondrial biogenesis protein AIM24 DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 Pfam PF03466 LysR substrate binding domain 89 290 6.2E-36 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 Gene3D G3DSA:1.10.10.10 1 91 1.5E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.5E-18 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 SUPERFAMILY SSF46785 1 85 7.71E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 Gene3D G3DSA:3.40.190.290 92 292 6.0E-45 T 01-11-2018 DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-8 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_02825 856f90147fce8b55ec569c17da2a943e 294 SUPERFAMILY SSF53850 89 290 2.82E-34 T 01-11-2018 DOE78_02715 7dd8ffa33a2dc924f972055ca59080e5 263 Pfam PF02567 Phenazine biosynthesis-like protein 6 252 8.9E-57 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DOE78_02715 7dd8ffa33a2dc924f972055ca59080e5 263 Gene3D G3DSA:3.10.310.10 116 247 1.5E-96 T 01-11-2018 DOE78_02715 7dd8ffa33a2dc924f972055ca59080e5 263 PIRSF PIRSF016184 1 259 5.8E-56 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DOE78_02715 7dd8ffa33a2dc924f972055ca59080e5 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 258 6.1E-35 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DOE78_02715 7dd8ffa33a2dc924f972055ca59080e5 263 Gene3D G3DSA:3.10.310.10 3 251 1.5E-96 T 01-11-2018 DOE78_02715 7dd8ffa33a2dc924f972055ca59080e5 263 SUPERFAMILY SSF54506 2 256 6.28E-78 T 01-11-2018 DOE78_23750 167c511607adf2f633cc4012441609a8 147 Gene3D G3DSA:3.40.1400.10 1 147 2.4E-59 T 01-11-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_23750 167c511607adf2f633cc4012441609a8 147 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 1.7E-52 T 01-11-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 DOE78_23750 167c511607adf2f633cc4012441609a8 147 SUPERFAMILY SSF89623 1 144 2.49E-58 T 01-11-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_23750 167c511607adf2f633cc4012441609a8 147 PIRSF PIRSF005384 1 147 4.1E-57 T 01-11-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_23750 167c511607adf2f633cc4012441609a8 147 Pfam PF02502 Ribose/Galactose Isomerase 3 140 3.1E-56 T 01-11-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_23750 167c511607adf2f633cc4012441609a8 147 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 4.9E-60 T 01-11-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DOE78_15020 2704859c13994e5016028e1866fe5f98 33 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 8 31 8.6E-13 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_15020 2704859c13994e5016028e1866fe5f98 33 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 7 30 2.4E-13 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_07830 ce9da4658ec05b36e89f05654a251d9f 180 Pfam PF00156 Phosphoribosyl transferase domain 6 165 4.6E-23 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_07830 ce9da4658ec05b36e89f05654a251d9f 180 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 179 39.526 T 01-11-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DOE78_07830 ce9da4658ec05b36e89f05654a251d9f 180 SUPERFAMILY SSF53271 6 173 5.64E-43 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_07830 ce9da4658ec05b36e89f05654a251d9f 180 Gene3D G3DSA:3.40.50.2020 1 180 4.3E-63 T 01-11-2018 DOE78_11635 ff8530035ca3b9968e07d31d14fe1ec9 110 Pfam PF12643 MazG-like family 29 110 2.2E-23 T 01-11-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 DOE78_11635 ff8530035ca3b9968e07d31d14fe1ec9 110 PIRSF PIRSF029826 2 110 7.0E-41 T 01-11-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 DOE78_11635 ff8530035ca3b9968e07d31d14fe1ec9 110 SUPERFAMILY SSF101386 5 109 1.06E-34 T 01-11-2018 DOE78_11635 ff8530035ca3b9968e07d31d14fe1ec9 110 Gene3D G3DSA:1.10.287.1080 2 101 1.9E-32 T 01-11-2018 DOE78_17475 b32385d5e6d1475341fd26f3d6768bc8 312 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 2.8E-108 T 01-11-2018 DOE78_17475 b32385d5e6d1475341fd26f3d6768bc8 312 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 5.5E-102 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DOE78_17475 b32385d5e6d1475341fd26f3d6768bc8 312 PIRSF PIRSF000401 1 312 2.1E-111 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DOE78_17475 b32385d5e6d1475341fd26f3d6768bc8 312 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.673 T 01-11-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DOE78_17475 b32385d5e6d1475341fd26f3d6768bc8 312 SUPERFAMILY SSF53335 95 310 1.64E-45 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_17475 b32385d5e6d1475341fd26f3d6768bc8 312 Gene3D G3DSA:3.40.50.150 116 312 3.4E-63 T 01-11-2018 DOE78_11245 9bb5f48876d9c68ad9cb98919bab8cb2 207 PIRSF PIRSF010372 1 205 3.4E-70 T 01-11-2018 IPR007396 Transcriptional regulator PAI 2-type DOE78_11245 9bb5f48876d9c68ad9cb98919bab8cb2 207 SUPERFAMILY SSF50475 10 187 2.7E-40 T 01-11-2018 DOE78_11245 9bb5f48876d9c68ad9cb98919bab8cb2 207 Gene3D G3DSA:2.30.110.10 1 204 1.1E-62 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 DOE78_11245 9bb5f48876d9c68ad9cb98919bab8cb2 207 Pfam PF04299 Putative FMN-binding domain 1 159 1.1E-49 T 01-11-2018 IPR007396 Transcriptional regulator PAI 2-type DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 Gene3D G3DSA:2.40.110.10 121 235 1.3E-37 T 01-11-2018 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 4.3E-25 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 SUPERFAMILY SSF56645 2 242 2.23E-80 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 7.5E-37 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 Gene3D G3DSA:1.20.140.10 236 378 1.1E-58 T 01-11-2018 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 Gene3D G3DSA:1.10.540.10 1 119 1.0E-42 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 PIRSF PIRSF016578 5 110 2.3E-7 T 01-11-2018 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 PIRSF PIRSF016578 130 377 1.4E-17 T 01-11-2018 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 SUPERFAMILY SSF47203 228 377 9.72E-61 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_17335 70a8900f0556ed22c2139b636d65da84 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.1E-54 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 SUPERFAMILY SSF46689 464 514 8.51E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 Gene3D G3DSA:1.10.10.60 460 516 5.1E-16 T 01-11-2018 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 SUPERFAMILY SSF52172 1 170 8.11E-33 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 Gene3D G3DSA:3.40.50.12740 3 172 1.6E-32 T 01-11-2018 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 SMART SM00448 2 116 1.6E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 Pfam PF12833 Helix-turn-helix domain 436 513 2.2E-14 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 Pfam PF00072 Response regulator receiver domain 4 116 3.8E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 Gene3D G3DSA:1.10.10.60 405 459 1.2E-14 T 01-11-2018 DOE78_08920 5a7d708fec14cee37e1689af530f7d86 519 SMART SM00342 426 512 7.7E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_19800 939c3423ccc821b74d5b33035642a684 391 Pfam PF13407 Periplasmic binding protein domain 95 339 4.1E-47 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_19800 939c3423ccc821b74d5b33035642a684 391 Gene3D G3DSA:3.40.50.2300 116 361 6.3E-64 T 01-11-2018 DOE78_19800 939c3423ccc821b74d5b33035642a684 391 SUPERFAMILY SSF53822 92 370 1.39E-54 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_19800 939c3423ccc821b74d5b33035642a684 391 Gene3D G3DSA:3.40.50.2300 199 335 6.3E-64 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 SMART SM01097 1 133 5.7E-65 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 Pfam PF00117 Glutamine amidotransferase class-I 171 347 3.8E-44 T 01-11-2018 IPR017926 Glutamine amidotransferase DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 2 132 4.1E-48 T 01-11-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 SUPERFAMILY SSF52021 1 139 5.1E-48 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 291 4.9E-31 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 169 183 4.9E-31 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 208 222 4.9E-31 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 255 272 4.9E-31 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 238 254 4.9E-31 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 324 337 1.7E-10 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 211 220 1.7E-10 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 238 249 1.7E-10 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 SUPERFAMILY SSF52317 163 352 6.69E-52 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 Gene3D G3DSA:3.40.50.880 156 358 4.0E-34 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 Gene3D G3DSA:3.50.30.20 1 149 2.4E-52 T 01-11-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 350 9.6E-132 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00097 Anthranilate synthase component II signature 238 249 9.0E-6 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00097 Anthranilate synthase component II signature 324 337 9.0E-6 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 PRINTS PR00097 Anthranilate synthase component II signature 211 220 9.0E-6 T 01-11-2018 DOE78_06485 7f76fff91d55de210769522c7dff3f1c 360 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 353 42.926 T 01-11-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DOE78_01105 ae20e250c4abc7fa65a08f0fe73a9950 382 Gene3D G3DSA:3.30.300.210 225 375 1.8E-22 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_01105 ae20e250c4abc7fa65a08f0fe73a9950 382 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 210 373 3.6E-30 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_01105 ae20e250c4abc7fa65a08f0fe73a9950 382 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 374 1.1E-82 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_12145 229366388054d8817c123bbd3ceb8c14 157 Pfam PF00293 NUDIX domain 6 125 1.0E-14 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_12145 229366388054d8817c123bbd3ceb8c14 157 Gene3D G3DSA:3.90.79.10 2 148 7.1E-31 T 01-11-2018 DOE78_12145 229366388054d8817c123bbd3ceb8c14 157 SUPERFAMILY SSF55811 3 142 2.3E-26 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_17105 31d8585818e3bba208c3755bb9c0ecf6 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 55 4.8E-25 T 01-11-2018 IPR024490 Protein of unknown function DUF2759 DOE78_17105 31d8585818e3bba208c3755bb9c0ecf6 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 4 54 6.0E-12 T 01-11-2018 IPR024490 Protein of unknown function DUF2759 DOE78_08700 45b567e78d80f57d57f2065a78746bba 71 Pfam PF03672 Uncharacterised protein family (UPF0154) 9 67 1.0E-28 T 01-11-2018 IPR005359 Protein with unknown function UPF0154 DOE78_08700 45b567e78d80f57d57f2065a78746bba 71 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 39 8.0E-6 T 01-11-2018 IPR005359 Protein with unknown function UPF0154 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 7.8E-63 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 ProSitePatterns PS00221 MIP family signature. 62 70 - T 01-11-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 PRINTS PR00783 Major intrinsic protein family signature 44 68 8.5E-50 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 PRINTS PR00783 Major intrinsic protein family signature 81 100 8.5E-50 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 PRINTS PR00783 Major intrinsic protein family signature 166 188 8.5E-50 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 PRINTS PR00783 Major intrinsic protein family signature 2 21 8.5E-50 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 PRINTS PR00783 Major intrinsic protein family signature 213 233 8.5E-50 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 PRINTS PR00783 Major intrinsic protein family signature 136 154 8.5E-50 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 Gene3D G3DSA:1.20.1080.10 1 242 4.7E-76 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 SUPERFAMILY SSF81338 2 234 4.84E-72 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DOE78_15190 7a531558f82f2e5ae8b8568bbaef74cf 273 Pfam PF00230 Major intrinsic protein 4 230 1.2E-49 T 01-11-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DOE78_21070 47b24c21a3b9eaf759b6dfc96fd21229 219 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 16 178 4.1E-22 T 01-11-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 55 91 1.0E-12 T 01-11-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 Gene3D G3DSA:3.30.1390.10 50 120 5.8E-32 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 SUPERFAMILY SSF54736 50 120 8.37E-26 T 01-11-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 49 4.6E-21 T 01-11-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 120 25.882 T 01-11-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 Gene3D G3DSA:1.20.5.710 1 49 1.3E-21 T 01-11-2018 DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 54 120 9.3E-32 T 01-11-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 SUPERFAMILY SSF48300 1 56 5.1E-17 T 01-11-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00655 a9eb21992088b4353acff28cb1db5b1a 120 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 120 1.0E-51 T 01-11-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_19775 4e7f6ddc898a36700af508d660ec67cf 594 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 136 562 100.74 T 01-11-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DOE78_19775 4e7f6ddc898a36700af508d660ec67cf 594 Gene3D G3DSA:3.20.20.540 180 493 6.9E-158 T 01-11-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DOE78_19775 4e7f6ddc898a36700af508d660ec67cf 594 Pfam PF13667 ThiC-associated domain 17 93 1.1E-32 T 01-11-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DOE78_19775 4e7f6ddc898a36700af508d660ec67cf 594 Pfam PF01964 Radical SAM ThiC family 137 557 7.8E-207 T 01-11-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DOE78_19775 4e7f6ddc898a36700af508d660ec67cf 594 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 136 560 3.9E-227 T 01-11-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 6 360 1.3E-88 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 SUPERFAMILY SSF55031 177 286 3.01E-29 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 Pfam PF01546 Peptidase family M20/M25/M40 66 368 5.0E-25 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 Gene3D G3DSA:3.40.630.10 6 357 7.0E-117 T 01-11-2018 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 PIRSF PIRSF005962 1 372 1.9E-108 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 2 371 62.899 T 01-11-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 Gene3D G3DSA:3.30.70.360 172 286 7.0E-117 T 01-11-2018 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 SUPERFAMILY SSF53187 3 366 9.22E-63 T 01-11-2018 DOE78_07285 0a8c14a18f119f2b8682d2b48de2505b 373 Pfam PF07687 Peptidase dimerisation domain 181 271 8.8E-10 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_01610 47b24ce327ce108622feaf46d1b3f589 190 Gene3D G3DSA:1.10.260.40 3 82 2.3E-21 T 01-11-2018 DOE78_01610 47b24ce327ce108622feaf46d1b3f589 190 Pfam PF01381 Helix-turn-helix 14 66 4.2E-16 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_01610 47b24ce327ce108622feaf46d1b3f589 190 Gene3D G3DSA:2.60.120.10 93 189 2.0E-16 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_01610 47b24ce327ce108622feaf46d1b3f589 190 SUPERFAMILY SSF51182 53 183 1.94E-12 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_01610 47b24ce327ce108622feaf46d1b3f589 190 SUPERFAMILY SSF47413 7 71 9.92E-20 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_01610 47b24ce327ce108622feaf46d1b3f589 190 SMART SM00530 13 68 2.3E-16 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_16015 feb3971b6fb3bd1879b0defa3ed36744 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 8.4E-48 T 01-11-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DOE78_16015 feb3971b6fb3bd1879b0defa3ed36744 224 PIRSF PIRSF000032 2 224 5.7E-103 T 01-11-2018 DOE78_16015 feb3971b6fb3bd1879b0defa3ed36744 224 Gene3D G3DSA:1.20.810.10 1 224 7.7E-89 T 01-11-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DOE78_16015 feb3971b6fb3bd1879b0defa3ed36744 224 SUPERFAMILY SSF81342 6 224 3.36E-61 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DOE78_04435 1cb485ce85b16b6b3a0d3d16603c9451 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.7E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_04435 1cb485ce85b16b6b3a0d3d16603c9451 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 9.7E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_04435 1cb485ce85b16b6b3a0d3d16603c9451 191 SUPERFAMILY SSF48498 81 188 4.13E-11 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_04435 1cb485ce85b16b6b3a0d3d16603c9451 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 8.1E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_04435 1cb485ce85b16b6b3a0d3d16603c9451 191 SUPERFAMILY SSF46689 3 69 6.67E-15 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04435 1cb485ce85b16b6b3a0d3d16603c9451 191 Gene3D G3DSA:1.10.357.10 71 191 8.6E-14 T 01-11-2018 DOE78_04435 1cb485ce85b16b6b3a0d3d16603c9451 191 Gene3D G3DSA:1.10.10.60 2 65 7.9E-22 T 01-11-2018 DOE78_11520 fab5532b639034bd98050f065cb53b9e 440 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 143 9.9E-18 T 01-11-2018 DOE78_11520 fab5532b639034bd98050f065cb53b9e 440 Gene3D G3DSA:3.30.565.10 15 196 9.1E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_11520 fab5532b639034bd98050f065cb53b9e 440 SUPERFAMILY SSF55874 15 169 1.77E-10 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_05575 9d0ccb917271f4b454f16c752ac7a299 258 SUPERFAMILY SSF103473 11 244 3.66E-5 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_05575 9d0ccb917271f4b454f16c752ac7a299 258 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 249 7.0E-92 T 01-11-2018 IPR022493 Integral membrane YkoY DOE78_05575 9d0ccb917271f4b454f16c752ac7a299 258 Pfam PF03741 Integral membrane protein TerC family 15 208 8.4E-52 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 DOE78_05575 9d0ccb917271f4b454f16c752ac7a299 258 Gene3D G3DSA:1.20.1250.20 4 249 7.9E-6 T 01-11-2018 DOE78_12040 eed7e626e51e4a6e94d355c830caeb17 391 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 172 376 3.9E-72 T 01-11-2018 IPR010897 Sporulation stage II, protein P DOE78_12040 eed7e626e51e4a6e94d355c830caeb17 391 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 145 373 4.5E-73 T 01-11-2018 IPR010897 Sporulation stage II, protein P DOE78_12040 eed7e626e51e4a6e94d355c830caeb17 391 SUPERFAMILY SSF53187 232 376 2.26E-6 T 01-11-2018 DOE78_20720 9bc1a8bde45d27e27564ac294e2ad4a2 257 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 164 1.1E-57 T 01-11-2018 IPR014240 Regulatory protein, YteA family DOE78_20720 9bc1a8bde45d27e27564ac294e2ad4a2 257 SUPERFAMILY SSF57716 90 118 1.21E-5 T 01-11-2018 DOE78_20720 9bc1a8bde45d27e27564ac294e2ad4a2 257 Gene3D G3DSA:1.20.120.910 1 127 3.5E-27 T 01-11-2018 DOE78_20720 9bc1a8bde45d27e27564ac294e2ad4a2 257 SUPERFAMILY SSF109635 2 89 2.88E-12 T 01-11-2018 IPR037187 DksA, N-terminal domain superfamily DOE78_20720 9bc1a8bde45d27e27564ac294e2ad4a2 257 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 116 1.1E-8 T 01-11-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DOE78_11425 b8a1e623bb9f61cfd54f5d37aabda308 74 SUPERFAMILY SSF47413 1 69 1.41E-19 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_11425 b8a1e623bb9f61cfd54f5d37aabda308 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 8.5E-24 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_11425 b8a1e623bb9f61cfd54f5d37aabda308 74 Gene3D G3DSA:1.10.260.40 6 74 5.9E-11 T 01-11-2018 DOE78_11425 b8a1e623bb9f61cfd54f5d37aabda308 74 SMART SM00530 6 62 2.5E-7 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_21315 a87fadc42ecda8af6332e98840da3cd8 206 SMART SM00855 3 156 5.3E-20 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_21315 a87fadc42ecda8af6332e98840da3cd8 206 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 01-11-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DOE78_21315 a87fadc42ecda8af6332e98840da3cd8 206 SUPERFAMILY SSF53254 1 203 1.01E-55 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_21315 a87fadc42ecda8af6332e98840da3cd8 206 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 192 1.1E-56 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_21315 a87fadc42ecda8af6332e98840da3cd8 206 Gene3D G3DSA:3.40.50.1240 2 204 1.9E-65 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_21315 a87fadc42ecda8af6332e98840da3cd8 206 PIRSF PIRSF000709 3 170 4.1E-26 T 01-11-2018 DOE78_13120 9bae3a5b58e8951b8efe0a21d255c903 299 Gene3D G3DSA:3.40.50.720 1 113 3.7E-27 T 01-11-2018 DOE78_13120 9bae3a5b58e8951b8efe0a21d255c903 299 Gene3D G3DSA:3.30.360.10 114 298 2.1E-50 T 01-11-2018 DOE78_13120 9bae3a5b58e8951b8efe0a21d255c903 299 SUPERFAMILY SSF55347 119 259 3.2E-37 T 01-11-2018 DOE78_13120 9bae3a5b58e8951b8efe0a21d255c903 299 SUPERFAMILY SSF51735 1 130 4.16E-35 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13120 9bae3a5b58e8951b8efe0a21d255c903 299 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 114 1.4E-23 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_18965 9997a89e09ce5d4f6aa9109078590fbf 145 Gene3D G3DSA:2.70.40.10 1 144 1.3E-54 T 01-11-2018 IPR036157 dUTPase-like superfamily DOE78_18965 9997a89e09ce5d4f6aa9109078590fbf 145 Pfam PF00692 dUTPase 16 141 4.5E-33 T 01-11-2018 IPR029054 dUTPase-like DOE78_18965 9997a89e09ce5d4f6aa9109078590fbf 145 SUPERFAMILY SSF51283 3 142 2.75E-47 T 01-11-2018 IPR036157 dUTPase-like superfamily DOE78_18965 9997a89e09ce5d4f6aa9109078590fbf 145 TIGRFAM TIGR00576 dut: dUTP diphosphatase 5 141 9.1E-51 T 01-11-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 425 7.7E-149 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 Gene3D G3DSA:1.10.3370.10 1 425 6.5E-158 T 01-11-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 Pfam PF00344 SecY translocase 68 413 1.4E-112 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 01-11-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PIRSF PIRSF004557 1 430 4.0E-127 T 01-11-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 SUPERFAMILY SSF103491 1 420 1.96E-129 T 01-11-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 429 28.774 T 01-11-2018 IPR026593 Protein translocase subunit SecY DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 309 331 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 364 382 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 8.2E-99 T 01-11-2018 DOE78_00825 f5179f2c50e79f4b1e857fda404f572a 430 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 01-11-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_18395 a80a187266ce0271f730626e51c91720 348 Gene3D G3DSA:3.30.360.10 151 315 6.8E-152 T 01-11-2018 DOE78_18395 a80a187266ce0271f730626e51c91720 348 SMART SM00846 3 152 1.3E-85 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 9.6E-42 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 9.6E-42 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 9.6E-42 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 9.6E-42 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 9.6E-42 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 8.3E-68 T 01-11-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 SUPERFAMILY SSF51735 1 151 1.24E-60 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18395 a80a187266ce0271f730626e51c91720 348 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 3.0E-37 T 01-11-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 6.2E-134 T 01-11-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 SUPERFAMILY SSF55347 152 314 2.41E-71 T 01-11-2018 DOE78_18395 a80a187266ce0271f730626e51c91720 348 Gene3D G3DSA:3.40.50.720 4 329 6.8E-152 T 01-11-2018 DOE78_18395 a80a187266ce0271f730626e51c91720 348 PIRSF PIRSF000149 1 335 1.7E-139 T 01-11-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_18395 a80a187266ce0271f730626e51c91720 348 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 01-11-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_23460 5109ee5dfe175f92c0c2726f863f47d2 322 SUPERFAMILY SSF161098 83 310 1.26E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_23460 5109ee5dfe175f92c0c2726f863f47d2 322 Gene3D G3DSA:1.10.3720.10 79 321 3.4E-63 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_23460 5109ee5dfe175f92c0c2726f863f47d2 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 317 1.2E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_18150 03694bff4b4f9b0f3c6f97d007afe05e 586 PIRSF PIRSF002741 1 586 1.1E-109 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DOE78_18150 03694bff4b4f9b0f3c6f97d007afe05e 586 Gene3D G3DSA:3.90.76.10 78 212 2.1E-143 T 01-11-2018 DOE78_18150 03694bff4b4f9b0f3c6f97d007afe05e 586 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 497 1.6E-92 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_18150 03694bff4b4f9b0f3c6f97d007afe05e 586 Gene3D G3DSA:3.10.105.10 310 554 2.1E-143 T 01-11-2018 DOE78_18150 03694bff4b4f9b0f3c6f97d007afe05e 586 SUPERFAMILY SSF53850 42 583 2.35E-123 T 01-11-2018 DOE78_18150 03694bff4b4f9b0f3c6f97d007afe05e 586 Gene3D G3DSA:3.40.190.10 59 568 2.1E-143 T 01-11-2018 DOE78_20600 d51bc0702220dfb5c8b34fcd36809627 401 Pfam PF07690 Major Facilitator Superfamily 13 296 3.0E-30 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_20600 d51bc0702220dfb5c8b34fcd36809627 401 Gene3D G3DSA:1.20.1250.20 205 398 4.7E-15 T 01-11-2018 DOE78_20600 d51bc0702220dfb5c8b34fcd36809627 401 Gene3D G3DSA:1.20.1250.20 2 188 4.6E-28 T 01-11-2018 DOE78_20600 d51bc0702220dfb5c8b34fcd36809627 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_20600 d51bc0702220dfb5c8b34fcd36809627 401 SUPERFAMILY SSF103473 7 390 4.19E-47 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_18940 b9707cb921f5e1060e9e648ef6710a30 190 Gene3D G3DSA:3.40.50.300 2 190 2.6E-32 T 01-11-2018 DOE78_18940 b9707cb921f5e1060e9e648ef6710a30 190 SUPERFAMILY SSF52540 7 187 5.02E-9 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 Pfam PF02056 Family 4 glycosyl hydrolase 6 186 1.2E-71 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 2.9E-48 T 01-11-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 Gene3D G3DSA:3.90.110.10 170 438 6.4E-99 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 SUPERFAMILY SSF56327 172 435 7.56E-93 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 Gene3D G3DSA:3.40.50.720 1 169 2.0E-71 T 01-11-2018 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.8E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 4.8E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.8E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.8E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 4.8E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 4.8E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.8E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 01-11-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DOE78_20640 ecdd1bef089d43797319f8cb753e68ea 438 SUPERFAMILY SSF51735 4 169 1.33E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_12810 3fe09f6d9ae60eacf4ac5bedf03ff06b 366 Gene3D G3DSA:3.30.2110.10 13 185 1.9E-47 T 01-11-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DOE78_12810 3fe09f6d9ae60eacf4ac5bedf03ff06b 366 PIRSF PIRSF026782 7 365 1.8E-123 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DOE78_12810 3fe09f6d9ae60eacf4ac5bedf03ff06b 366 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 11 362 28.824 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DOE78_12810 3fe09f6d9ae60eacf4ac5bedf03ff06b 366 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 18 363 9.7E-66 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DOE78_12810 3fe09f6d9ae60eacf4ac5bedf03ff06b 366 SUPERFAMILY SSF111342 5 289 4.32E-85 T 01-11-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DOE78_12810 3fe09f6d9ae60eacf4ac5bedf03ff06b 366 Pfam PF01888 CbiD 11 271 1.3E-94 T 01-11-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DOE78_04665 7b604c864ccbc5ef3029fa8a52cec7b8 240 PIRSF PIRSF039085 1 240 5.1E-115 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DOE78_04665 7b604c864ccbc5ef3029fa8a52cec7b8 240 Gene3D G3DSA:3.40.50.300 1 240 4.9E-80 T 01-11-2018 DOE78_04665 7b604c864ccbc5ef3029fa8a52cec7b8 240 SUPERFAMILY SSF52540 1 235 1.86E-79 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_04665 7b604c864ccbc5ef3029fa8a52cec7b8 240 Pfam PF00005 ABC transporter 17 165 2.1E-38 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04665 7b604c864ccbc5ef3029fa8a52cec7b8 240 SMART SM00382 26 213 5.9E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04665 7b604c864ccbc5ef3029fa8a52cec7b8 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 Gene3D G3DSA:3.30.450.40 239 375 2.1E-5 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 SUPERFAMILY SSF55874 431 573 5.89E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 SMART SM00387 468 576 1.7E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 SUPERFAMILY SSF55781 244 362 8.18E-6 T 01-11-2018 DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 Gene3D G3DSA:3.30.565.10 428 578 3.5E-18 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 Pfam PF06580 Histidine kinase 374 453 5.8E-25 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 574 1.2E-12 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 Gene3D G3DSA:1.10.1760.20 85 212 2.1E-6 T 01-11-2018 DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 Pfam PF07694 5TMR of 5TMR-LYT 26 204 1.5E-53 T 01-11-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DOE78_24220 7c5fc4067e21ec21a7de7784969efc1a 584 Pfam PF13492 GAF domain 237 360 2.3E-7 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 SUPERFAMILY SSF53901 5 268 1.49E-77 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 1.6E-74 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 9.2E-47 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 PIRSF PIRSF000429 1 391 6.9E-127 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 SUPERFAMILY SSF53901 269 390 8.64E-43 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 Gene3D G3DSA:3.40.47.10 8 274 4.0E-144 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 389 2.2E-133 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_09055 4e8a43d03e7dc415765625254e587fc9 391 Gene3D G3DSA:3.40.47.10 127 387 4.0E-144 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_04655 d189dd181ceda413187b6ba2ac7fdda6 255 SUPERFAMILY SSF53850 2 253 7.56E-65 T 01-11-2018 DOE78_04655 d189dd181ceda413187b6ba2ac7fdda6 255 SMART SM00062 36 255 1.5E-63 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_04655 d189dd181ceda413187b6ba2ac7fdda6 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 6.2E-60 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_04655 d189dd181ceda413187b6ba2ac7fdda6 255 Gene3D G3DSA:3.40.190.10 40 251 3.4E-65 T 01-11-2018 DOE78_04655 d189dd181ceda413187b6ba2ac7fdda6 255 Gene3D G3DSA:3.40.190.10 121 215 3.4E-65 T 01-11-2018 DOE78_04655 d189dd181ceda413187b6ba2ac7fdda6 255 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 01-11-2018 IPR018313 Solute-binding protein family 3, conserved site DOE78_04655 d189dd181ceda413187b6ba2ac7fdda6 255 SMART SM00079 36 254 5.2E-5 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 117 5.5E-29 T 01-11-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 Pfam PF13183 4Fe-4S dicluster domain 151 226 1.9E-9 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 Gene3D G3DSA:1.10.1060.10 114 248 7.3E-29 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 12 234 3.2E-41 T 01-11-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 SUPERFAMILY SSF54292 4 112 1.19E-24 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 SUPERFAMILY SSF46548 114 239 2.09E-26 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 Gene3D G3DSA:3.10.20.30 1 112 4.4E-32 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_18210 b69dbb37cda8e4e933d070cf9eca1260 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_17930 d3bd779efd84a2b8f17b003088791787 110 SUPERFAMILY SSF118010 1 109 1.2E-32 T 01-11-2018 IPR036764 Cysteine protease Prp superfamily DOE78_17930 d3bd779efd84a2b8f17b003088791787 110 Gene3D G3DSA:3.30.70.1490 1 110 3.2E-35 T 01-11-2018 IPR036764 Cysteine protease Prp superfamily DOE78_17930 d3bd779efd84a2b8f17b003088791787 110 Pfam PF04327 Cysteine protease Prp 1 105 1.5E-26 T 01-11-2018 IPR007422 Cysteine protease Prp DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 ProSitePatterns PS00150 Acylphosphatase signature 1. 9 19 - T 01-11-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Gene3D G3DSA:3.30.110.120 253 371 1.0E-147 T 01-11-2018 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Gene3D G3DSA:3.30.420.360 383 754 6.9E-124 T 01-11-2018 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 SUPERFAMILY SSF55821 174 391 3.66E-47 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Pfam PF07503 HypF finger 107 140 4.2E-17 T 01-11-2018 IPR011125 Zinc finger, HypF-type GO:0008270 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Pfam PF07503 HypF finger 157 190 3.2E-16 T 01-11-2018 IPR011125 Zinc finger, HypF-type GO:0008270 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 SUPERFAMILY SSF54975 2 89 5.01E-21 T 01-11-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 PIRSF PIRSF006256 1 760 1.0E-283 T 01-11-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Gene3D G3DSA:3.30.420.350 482 742 6.9E-124 T 01-11-2018 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Gene3D G3DSA:3.90.870.50 7 362 1.0E-147 T 01-11-2018 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 7 756 5.3E-244 T 01-11-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Pfam PF01300 Telomere recombination 210 384 1.8E-51 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 DOE78_16640 e5acb4979debdc11288bce61e517ea9c 760 Pfam PF00708 Acylphosphatase 6 88 8.6E-21 T 01-11-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DOE78_23820 dff2f45b74d44f690c0dab51bd5dbc0f 215 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 2 212 3.9E-100 T 01-11-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DOE78_23820 dff2f45b74d44f690c0dab51bd5dbc0f 215 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 203 1.5E-58 T 01-11-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DOE78_23820 dff2f45b74d44f690c0dab51bd5dbc0f 215 ProSitePatterns PS00958 Transaldolase active site. 81 98 - T 01-11-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DOE78_23820 dff2f45b74d44f690c0dab51bd5dbc0f 215 Hamap MF_00494 Probable transaldolase [tal]. 1 215 46.945 T 01-11-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DOE78_23820 dff2f45b74d44f690c0dab51bd5dbc0f 215 SUPERFAMILY SSF51569 2 213 1.05E-78 T 01-11-2018 DOE78_23820 dff2f45b74d44f690c0dab51bd5dbc0f 215 Gene3D G3DSA:3.20.20.70 1 212 3.4E-91 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_23820 dff2f45b74d44f690c0dab51bd5dbc0f 215 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 01-11-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DOE78_20605 704c6580dabfc6e7ea9eb13320943895 408 SUPERFAMILY SSF103473 2 395 8.37E-33 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_20605 704c6580dabfc6e7ea9eb13320943895 408 Gene3D G3DSA:1.20.1250.20 3 395 4.1E-27 T 01-11-2018 DOE78_20605 704c6580dabfc6e7ea9eb13320943895 408 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_20605 704c6580dabfc6e7ea9eb13320943895 408 Pfam PF07690 Major Facilitator Superfamily 16 274 1.4E-16 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_15290 125a761a95dbd2870b592f76ba8ff1c1 135 Gene3D G3DSA:2.60.40.790 7 128 3.2E-25 T 01-11-2018 IPR008978 HSP20-like chaperone DOE78_15290 125a761a95dbd2870b592f76ba8ff1c1 135 Pfam PF00011 Hsp20/alpha crystallin family 37 126 1.4E-15 T 01-11-2018 IPR002068 Alpha crystallin/Hsp20 domain DOE78_15290 125a761a95dbd2870b592f76ba8ff1c1 135 SUPERFAMILY SSF49764 23 126 3.4E-22 T 01-11-2018 IPR008978 HSP20-like chaperone DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 207 304 4.6E-10 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 Gene3D G3DSA:3.40.50.720 1 207 9.5E-64 T 01-11-2018 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 Gene3D G3DSA:1.10.1040.10 365 436 3.9E-6 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 204 4.0E-43 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 SUPERFAMILY SSF51735 3 205 1.97E-41 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 SUPERFAMILY SSF48179 205 325 4.59E-22 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 SUPERFAMILY SSF52096 483 791 3.32E-37 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 Gene3D G3DSA:1.10.1040.10 208 334 2.7E-18 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 SUPERFAMILY SSF48179 356 446 6.8E-16 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 Pfam PF16113 Enoyl-CoA hydratase/isomerase 490 621 2.5E-9 T 01-11-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 DOE78_21210 3a90ccd89b96cc330125c4047329f6fd 794 Gene3D G3DSA:3.90.226.10 485 684 6.4E-28 T 01-11-2018 DOE78_22535 69db3ba3ee6f4df2a185685a1993df61 70 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 44 58 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_22535 69db3ba3ee6f4df2a185685a1993df61 70 Gene3D G3DSA:1.10.8.910 11 70 2.4E-31 T 01-11-2018 IPR038300 SASP, alpha/beta-type superfamily DOE78_22535 69db3ba3ee6f4df2a185685a1993df61 70 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 65 1.6E-22 T 01-11-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DOE78_22535 69db3ba3ee6f4df2a185685a1993df61 70 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 26 35 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_09015 ff6a72fe175d8be5bb6a0c745083a89e 242 Gene3D G3DSA:3.40.50.300 1 238 2.2E-63 T 01-11-2018 DOE78_09015 ff6a72fe175d8be5bb6a0c745083a89e 242 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.3E-6 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DOE78_09015 ff6a72fe175d8be5bb6a0c745083a89e 242 SUPERFAMILY SSF52540 2 236 1.36E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09015 ff6a72fe175d8be5bb6a0c745083a89e 242 SMART SM00382 26 214 1.8E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_09015 ff6a72fe175d8be5bb6a0c745083a89e 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_09015 ff6a72fe175d8be5bb6a0c745083a89e 242 Pfam PF00005 ABC transporter 17 164 6.4E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 Pfam PF02954 Bacterial regulatory protein, Fis family 477 513 2.2E-13 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 SUPERFAMILY SSF46689 428 515 1.43E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 SMART SM00382 231 375 3.9E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 SUPERFAMILY SSF55785 66 176 4.71E-11 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 SUPERFAMILY SSF52540 211 456 1.29E-72 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 Gene3D G3DSA:3.30.450.20 61 176 2.8E-16 T 01-11-2018 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 Gene3D G3DSA:3.40.50.300 201 382 6.4E-66 T 01-11-2018 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 Pfam PF00158 Sigma-54 interaction domain 212 377 4.5E-71 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 74 185 2.8E-8 T 01-11-2018 IPR000014 PAS domain DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 479 496 3.1E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 496 515 3.1E-10 T 01-11-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 Pfam PF13426 PAS domain 83 177 5.7E-8 T 01-11-2018 IPR000014 PAS domain DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 SMART SM00091 73 138 4.2E-5 T 01-11-2018 IPR000014 PAS domain DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 Gene3D G3DSA:1.10.8.60 383 449 1.4E-21 T 01-11-2018 DOE78_10430 49b5f62f8d845ead7af9039d94958d99 515 Gene3D G3DSA:1.10.10.60 450 515 1.5E-15 T 01-11-2018 DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 Gene3D G3DSA:3.90.180.10 10 335 2.9E-112 T 01-11-2018 DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 Gene3D G3DSA:3.40.50.720 160 296 2.9E-112 T 01-11-2018 DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 SUPERFAMILY SSF50129 1 182 1.45E-56 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 SMART SM00829 8 348 5.0E-6 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 1.7E-34 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 SUPERFAMILY SSF51735 146 314 3.69E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_09080 2c6940b51ba1abcc47b768c98210cba5 352 Pfam PF00107 Zinc-binding dehydrogenase 183 310 2.0E-30 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_12060 bd6311dd982a73122e6ae3e2582df10f 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 268 1.7E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12060 bd6311dd982a73122e6ae3e2582df10f 279 SUPERFAMILY SSF161098 6 278 4.95E-74 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12060 bd6311dd982a73122e6ae3e2582df10f 279 Gene3D G3DSA:1.10.3720.10 1 266 9.2E-67 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_23590 8d02e478f9241af757fbd9d246e2a5c3 301 Gene3D G3DSA:2.70.70.10 77 235 4.2E-47 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_23590 8d02e478f9241af757fbd9d246e2a5c3 301 SUPERFAMILY SSF51261 95 222 3.66E-26 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_23590 8d02e478f9241af757fbd9d246e2a5c3 301 Pfam PF01551 Peptidase family M23 120 219 1.0E-22 T 01-11-2018 IPR016047 Peptidase M23 DOE78_13990 de96d5c827f5b05ee2d65841bb724e8d 643 SUPERFAMILY SSF56300 175 557 1.39E-10 T 01-11-2018 DOE78_13990 de96d5c827f5b05ee2d65841bb724e8d 643 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 4 639 3.0E-288 T 01-11-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DOE78_13990 de96d5c827f5b05ee2d65841bb724e8d 643 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 2 643 39.452 T 01-11-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DOE78_13990 de96d5c827f5b05ee2d65841bb724e8d 643 PIRSF PIRSF000906 1 643 0.0 T 01-11-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DOE78_16645 f4a28957b087f207198f6dd1a9a426d1 219 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 31 190 4.5E-29 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE78_16645 f4a28957b087f207198f6dd1a9a426d1 219 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 3 212 1.7E-84 T 01-11-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 DOE78_16645 f4a28957b087f207198f6dd1a9a426d1 219 Gene3D G3DSA:3.40.50.300 11 217 1.0E-60 T 01-11-2018 DOE78_16645 f4a28957b087f207198f6dd1a9a426d1 219 PIRSF PIRSF005624 1 218 6.0E-87 T 01-11-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 DOE78_16645 f4a28957b087f207198f6dd1a9a426d1 219 SUPERFAMILY SSF52540 16 212 2.9E-36 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 6.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.6E-31 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 Gene3D G3DSA:3.40.50.720 3 240 4.3E-65 T 01-11-2018 DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.0E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.0E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.0E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 SUPERFAMILY SSF51735 3 231 1.75E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16885 e9387038eeab4bfb4e616b08371f428c 241 Pfam PF00106 short chain dehydrogenase 6 194 7.2E-53 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16980 98153dc87b82e78fe7733a6cb2e74a5c 294 Pfam PF01734 Patatin-like phospholipase 6 195 2.3E-34 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DOE78_16980 98153dc87b82e78fe7733a6cb2e74a5c 294 Gene3D G3DSA:3.40.1090.10 95 292 3.8E-21 T 01-11-2018 DOE78_16980 98153dc87b82e78fe7733a6cb2e74a5c 294 SUPERFAMILY SSF52151 6 291 9.68E-46 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE78_16980 98153dc87b82e78fe7733a6cb2e74a5c 294 Gene3D G3DSA:3.40.1090.20 2 85 1.3E-21 T 01-11-2018 DOE78_14435 9cb504baba5f355ed64b94f9281d768d 235 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 113 234 2.6E-59 T 01-11-2018 IPR014258 CAP domain, YkwD-like DOE78_14435 9cb504baba5f355ed64b94f9281d768d 235 Pfam PF00188 Cysteine-rich secretory protein family 120 230 1.1E-22 T 01-11-2018 IPR014044 CAP domain DOE78_14435 9cb504baba5f355ed64b94f9281d768d 235 SUPERFAMILY SSF55797 112 229 8.37E-25 T 01-11-2018 IPR035940 CAP superfamily DOE78_14435 9cb504baba5f355ed64b94f9281d768d 235 Gene3D G3DSA:3.40.33.10 4 235 1.1E-64 T 01-11-2018 IPR035940 CAP superfamily DOE78_21415 b7f868f8c489d5233f54a7151dddd925 387 SUPERFAMILY SSF56796 1 385 2.75E-112 T 01-11-2018 DOE78_21415 b7f868f8c489d5233f54a7151dddd925 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_21415 b7f868f8c489d5233f54a7151dddd925 387 Gene3D G3DSA:1.20.1090.10 185 386 8.5E-45 T 01-11-2018 DOE78_21415 b7f868f8c489d5233f54a7151dddd925 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 375 1.2E-99 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DOE78_21415 b7f868f8c489d5233f54a7151dddd925 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_21415 b7f868f8c489d5233f54a7151dddd925 387 Gene3D G3DSA:3.40.50.1970 1 184 1.1E-54 T 01-11-2018 DOE78_22080 8d89c199f9255b4c934d4804d7ab34eb 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 01-11-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22080 8d89c199f9255b4c934d4804d7ab34eb 253 Pfam PF00121 Triosephosphate isomerase 5 246 3.8E-95 T 01-11-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22080 8d89c199f9255b4c934d4804d7ab34eb 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 62.294 T 01-11-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22080 8d89c199f9255b4c934d4804d7ab34eb 253 Gene3D G3DSA:3.20.20.70 2 253 2.0E-105 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_22080 8d89c199f9255b4c934d4804d7ab34eb 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.9E-61 T 01-11-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22080 8d89c199f9255b4c934d4804d7ab34eb 253 SUPERFAMILY SSF51351 1 248 4.97E-96 T 01-11-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 Pfam PF00072 Response regulator receiver domain 4 116 9.0E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 SMART SM00448 2 116 2.9E-32 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 SUPERFAMILY SSF46894 147 213 8.5E-23 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.2E-15 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 SUPERFAMILY SSF52172 2 135 2.28E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 Gene3D G3DSA:3.40.50.12740 2 213 1.9E-69 T 01-11-2018 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 SMART SM00421 150 207 1.4E-26 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 4.0E-21 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14680 3bf5276185afd3f35ca04058cfe96513 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_16715 ec34b9e0a2cd61f9ab4e246acc70ae3c 141 Gene3D G3DSA:3.10.180.10 1 136 3.6E-41 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_16715 ec34b9e0a2cd61f9ab4e246acc70ae3c 141 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 8 134 1.6E-42 T 01-11-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 DOE78_16715 ec34b9e0a2cd61f9ab4e246acc70ae3c 141 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 119 1.1E-20 T 01-11-2018 DOE78_16715 ec34b9e0a2cd61f9ab4e246acc70ae3c 141 SUPERFAMILY SSF54593 6 137 3.22E-32 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_16715 ec34b9e0a2cd61f9ab4e246acc70ae3c 141 ProSitePatterns PS00934 Glyoxalase I signature 1. 10 31 - T 01-11-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 SUPERFAMILY SSF53955 73 282 2.45E-70 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 Gene3D G3DSA:3.90.1310.20 79 540 4.9E-213 T 01-11-2018 DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 Pfam PF00912 Transglycosylase 84 258 2.6E-60 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 Gene3D G3DSA:2.60.40.10 699 800 3.7E-5 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 Gene3D G3DSA:1.10.3810.10 94 286 4.9E-213 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 Pfam PF00905 Penicillin binding protein transpeptidase domain 355 639 9.9E-40 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 SUPERFAMILY SSF56601 240 707 1.09E-105 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 Gene3D G3DSA:3.40.710.10 327 655 4.9E-213 T 01-11-2018 DOE78_15890 9153cc728c65c8f502a418d417b1a730 857 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 94 644 1.6E-179 T 01-11-2018 DOE78_08510 5ed30bf11afb05934a4ee9394fcff0f3 361 Gene3D G3DSA:3.30.70.270 175 344 2.2E-42 T 01-11-2018 DOE78_08510 5ed30bf11afb05934a4ee9394fcff0f3 361 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 339 1.5E-36 T 01-11-2018 IPR000160 GGDEF domain DOE78_08510 5ed30bf11afb05934a4ee9394fcff0f3 361 SUPERFAMILY SSF55073 193 342 1.49E-37 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_08510 5ed30bf11afb05934a4ee9394fcff0f3 361 SMART SM00267 176 343 5.0E-35 T 01-11-2018 IPR000160 GGDEF domain DOE78_08510 5ed30bf11afb05934a4ee9394fcff0f3 361 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 341 3.5E-37 T 01-11-2018 IPR000160 GGDEF domain DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 SUPERFAMILY SSF46785 5 84 4.83E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 Gene3D G3DSA:1.10.10.10 1 74 1.3E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 Pfam PF07729 FCD domain 100 225 2.4E-24 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 5.0E-21 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 SMART SM00895 99 226 1.5E-20 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.1E-7 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.1E-7 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 SUPERFAMILY SSF48008 95 235 6.02E-27 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 Gene3D G3DSA:1.20.120.530 93 236 1.9E-27 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_06370 40e08b8130c14ff950a63b3eb2b6357b 236 SMART SM00345 15 74 1.4E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_22570 ddb378040e0a89615286337273ef3115 363 Pfam PF00107 Zinc-binding dehydrogenase 170 304 2.7E-22 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_22570 ddb378040e0a89615286337273ef3115 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 1.5E-32 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_22570 ddb378040e0a89615286337273ef3115 363 Gene3D G3DSA:3.90.180.10 23 327 1.8E-101 T 01-11-2018 DOE78_22570 ddb378040e0a89615286337273ef3115 363 Gene3D G3DSA:3.40.50.720 147 284 1.8E-101 T 01-11-2018 DOE78_22570 ddb378040e0a89615286337273ef3115 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_22570 ddb378040e0a89615286337273ef3115 363 SUPERFAMILY SSF50129 1 168 1.02E-48 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_22570 ddb378040e0a89615286337273ef3115 363 SUPERFAMILY SSF51735 132 309 7.12E-34 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_15440 d2195681feb9d5b6ccacda119c053f4a 230 Pfam PF01144 Coenzyme A transferase 10 218 2.1E-63 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_15440 d2195681feb9d5b6ccacda119c053f4a 230 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 01-11-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 DOE78_15440 d2195681feb9d5b6ccacda119c053f4a 230 Gene3D G3DSA:3.40.1080.10 5 222 2.2E-74 T 01-11-2018 DOE78_15440 d2195681feb9d5b6ccacda119c053f4a 230 SMART SM00882 8 220 3.3E-72 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_15440 d2195681feb9d5b6ccacda119c053f4a 230 SUPERFAMILY SSF100950 6 222 1.14E-73 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_15440 d2195681feb9d5b6ccacda119c053f4a 230 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 8 221 6.4E-64 T 01-11-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 DOE78_04905 fccd3cfe6a60bb8da8283fe2c7a75cdb 129 SMART SM00317 3 120 1.1E-5 T 01-11-2018 IPR001214 SET domain GO:0005515 DOE78_04905 fccd3cfe6a60bb8da8283fe2c7a75cdb 129 PIRSF PIRSF022536 1 129 7.1E-33 T 01-11-2018 IPR009207 Histone methyltransferase, PBCV type putative KEGG: 00310+2.1.1.43 DOE78_04905 fccd3cfe6a60bb8da8283fe2c7a75cdb 129 Gene3D G3DSA:2.170.270.10 1 117 1.4E-30 T 01-11-2018 DOE78_04905 fccd3cfe6a60bb8da8283fe2c7a75cdb 129 Pfam PF00856 SET domain 19 114 8.1E-15 T 01-11-2018 IPR001214 SET domain GO:0005515 DOE78_04905 fccd3cfe6a60bb8da8283fe2c7a75cdb 129 SUPERFAMILY SSF82199 15 116 1.13E-22 T 01-11-2018 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 Gene3D G3DSA:1.20.58.100 395 492 6.9E-19 T 01-11-2018 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 SUPERFAMILY SSF46977 415 510 1.03E-21 T 01-11-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 Gene3D G3DSA:3.90.700.10 229 335 2.9E-129 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 Gene3D G3DSA:3.50.50.60 5 379 2.9E-129 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 SUPERFAMILY SSF56425 219 329 2.09E-29 T 01-11-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 SUPERFAMILY SSF51905 2 389 1.18E-57 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 332 354 1.8E-5 T 01-11-2018 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-5 T 01-11-2018 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 492 5.9E-160 T 01-11-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 Pfam PF00890 FAD binding domain 5 369 1.3E-78 T 01-11-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_17890 d82ec29bdba6b8c3a43f1204a2eb0bf3 524 Pfam PF02910 Fumarate reductase flavoprotein C-term 415 511 7.3E-14 T 01-11-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DOE78_17080 9ce1bdd3dbebc646e1b41ccccbdb0069 125 SUPERFAMILY SSF52833 4 115 2.42E-33 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_17080 9ce1bdd3dbebc646e1b41ccccbdb0069 125 Gene3D G3DSA:3.40.30.10 4 122 1.7E-36 T 01-11-2018 DOE78_17080 9ce1bdd3dbebc646e1b41ccccbdb0069 125 Pfam PF03960 ArsC family 10 113 2.9E-19 T 01-11-2018 IPR006660 Arsenate reductase-like DOE78_17080 9ce1bdd3dbebc646e1b41ccccbdb0069 125 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 6 114 6.7E-36 T 01-11-2018 IPR006504 Transcriptional regulator Spx/MgsR DOE78_10085 c808117fb1c1ecf5f0b161f094c0cef4 187 Gene3D G3DSA:3.40.50.1240 1 187 6.6E-17 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_10085 c808117fb1c1ecf5f0b161f094c0cef4 187 SUPERFAMILY SSF53254 1 186 4.5E-18 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_10085 c808117fb1c1ecf5f0b161f094c0cef4 187 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 183 6.7E-13 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_01070 2d03f2a74ebd616be72c824f1fceca2d 98 SUPERFAMILY SSF52821 2 94 2.75E-30 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01070 2d03f2a74ebd616be72c824f1fceca2d 98 Pfam PF00581 Rhodanese-like domain 5 94 3.0E-15 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01070 2d03f2a74ebd616be72c824f1fceca2d 98 Gene3D G3DSA:3.40.250.10 2 97 9.5E-28 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01070 2d03f2a74ebd616be72c824f1fceca2d 98 SMART SM00450 5 98 1.8E-15 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_18910 bc44df8b6984ca94eb62dca43b191593 131 SUPERFAMILY SSF88659 62 109 4.3E-9 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_18910 bc44df8b6984ca94eb62dca43b191593 131 Pfam PF04545 Sigma-70, region 4 63 106 3.8E-9 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_18910 bc44df8b6984ca94eb62dca43b191593 131 Gene3D G3DSA:1.10.10.10 33 111 2.3E-8 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04785 6fe5955f258d9a359e12866dc9122856 241 Pfam PF04519 Polymer-forming cytoskeletal 7 88 3.6E-9 T 01-11-2018 IPR007607 Bactofilin A/B DOE78_00455 18f2f5c3a3fc930e7225057051873a1d 175 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DOE78_00455 18f2f5c3a3fc930e7225057051873a1d 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 133 4.0E-48 T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DOE78_00455 18f2f5c3a3fc930e7225057051873a1d 175 SUPERFAMILY SSF55083 4 153 3.53E-54 T 01-11-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DOE78_00455 18f2f5c3a3fc930e7225057051873a1d 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 133 1.1E-39 T 01-11-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DOE78_00455 18f2f5c3a3fc930e7225057051873a1d 175 Gene3D G3DSA:3.30.70.560 2 173 1.8E-58 T 01-11-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DOE78_09105 5ac59396bd7b3277cfde22a4b0597c5b 535 Gene3D G3DSA:3.40.190.10 75 437 1.3E-144 T 01-11-2018 DOE78_09105 5ac59396bd7b3277cfde22a4b0597c5b 535 Pfam PF01547 Bacterial extracellular solute-binding protein 72 382 8.4E-15 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_09105 5ac59396bd7b3277cfde22a4b0597c5b 535 Gene3D G3DSA:3.40.190.10 175 530 1.3E-144 T 01-11-2018 DOE78_09105 5ac59396bd7b3277cfde22a4b0597c5b 535 SUPERFAMILY SSF53850 22 532 1.21E-99 T 01-11-2018 DOE78_14685 f296c8eb56e855feb5867b294d5158b3 215 SUPERFAMILY SSF55874 90 215 4.32E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14685 f296c8eb56e855feb5867b294d5158b3 215 Gene3D G3DSA:3.30.565.10 84 215 9.9E-27 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14685 f296c8eb56e855feb5867b294d5158b3 215 Pfam PF07730 Histidine kinase 23 86 2.0E-8 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_14685 f296c8eb56e855feb5867b294d5158b3 215 PRINTS PR00344 Bacterial sensor protein C-terminal signature 177 195 2.8E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14685 f296c8eb56e855feb5867b294d5158b3 215 PRINTS PR00344 Bacterial sensor protein C-terminal signature 201 214 2.8E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14685 f296c8eb56e855feb5867b294d5158b3 215 PRINTS PR00344 Bacterial sensor protein C-terminal signature 160 174 2.8E-5 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_14685 f296c8eb56e855feb5867b294d5158b3 215 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 127 215 1.0E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_11960 24cc23b7c89efab3129e21e6823cdb00 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 268 4.2E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_11960 24cc23b7c89efab3129e21e6823cdb00 277 SUPERFAMILY SSF161098 4 277 2.94E-55 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11960 24cc23b7c89efab3129e21e6823cdb00 277 Gene3D G3DSA:1.10.3720.10 1 269 6.0E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 Gene3D G3DSA:3.40.50.300 4 281 1.1E-157 T 01-11-2018 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 46.429 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.2E-39 T 01-11-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 Gene3D G3DSA:1.10.150.300 113 200 1.1E-157 T 01-11-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.4E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.4E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.4E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-35 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 Gene3D G3DSA:3.10.20.30 48 364 1.1E-157 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 SUPERFAMILY SSF81271 282 363 3.05E-35 T 01-11-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 PIRSF PIRSF006641 1 366 3.1E-167 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 Pfam PF01926 50S ribosome-binding GTPase 5 124 1.0E-23 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 8.1E-160 T 01-11-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DOE78_24650 4b65e0e6447ad57fbcd399617e7a41f5 366 SUPERFAMILY SSF52540 3 304 8.76E-91 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03530 d530ac5d9906262694ac370fcc395daa 269 Pfam PF01522 Polysaccharide deacetylase 60 182 3.2E-31 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DOE78_03530 d530ac5d9906262694ac370fcc395daa 269 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 29 251 2.4E-107 T 01-11-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA DOE78_03530 d530ac5d9906262694ac370fcc395daa 269 SUPERFAMILY SSF88713 50 252 6.67E-66 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_03530 d530ac5d9906262694ac370fcc395daa 269 Gene3D G3DSA:3.20.20.370 15 255 2.3E-84 T 01-11-2018 DOE78_14925 77ebdbb5043bb41d19276eb7b209638d 124 PIRSF PIRSF026568 1 124 6.7E-56 T 01-11-2018 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein DOE78_14925 77ebdbb5043bb41d19276eb7b209638d 124 Gene3D G3DSA:3.40.1440.10 33 122 9.1E-14 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DOE78_14925 77ebdbb5043bb41d19276eb7b209638d 124 SUPERFAMILY SSF82771 43 120 1.27E-12 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DOE78_14925 77ebdbb5043bb41d19276eb7b209638d 124 Pfam PF01541 GIY-YIG catalytic domain 44 117 7.3E-8 T 01-11-2018 IPR000305 GIY-YIG endonuclease DOE78_14925 77ebdbb5043bb41d19276eb7b209638d 124 SMART SM00465 43 122 1.0E-8 T 01-11-2018 IPR000305 GIY-YIG endonuclease DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 SUPERFAMILY SSF51735 2 155 1.13E-18 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 261 19.804 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 97 8.1E-13 T 01-11-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 2 261 2.8E-59 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 157 261 2.2E-22 T 01-11-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 SUPERFAMILY SSF48179 156 262 3.23E-24 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 Gene3D G3DSA:1.10.3730.10 160 263 2.1E-24 T 01-11-2018 DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 Gene3D G3DSA:3.40.50.720 1 159 7.9E-35 T 01-11-2018 DOE78_12115 b27b731fda2cf05706532f7531a7afa7 263 PIRSF PIRSF000193 1 263 5.7E-70 T 01-11-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 Pfam PF12544 Lysine-2,3-aminomutase 321 447 4.9E-62 T 01-11-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 Gene3D G3DSA:3.20.20.70 63 348 8.0E-119 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 21 427 1.5E-194 T 01-11-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 Gene3D G3DSA:2.40.50.600 349 413 3.0E-20 T 01-11-2018 DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 PIRSF PIRSF004911 2 399 2.5E-161 T 01-11-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 SUPERFAMILY SSF102114 114 355 4.05E-32 T 01-11-2018 DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 Pfam PF13353 4Fe-4S single cluster domain 127 200 6.0E-5 T 01-11-2018 DOE78_15415 82f6bc7861ed356bd8f6326f186aafb7 466 TIGRFAM TIGR00238 TIGR00238: KamA family protein 14 342 1.6E-146 T 01-11-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DOE78_20440 6f05c54fd02fc419dd8bf0f76c6ea81d 386 Gene3D G3DSA:3.40.50.2000 88 198 8.2E-37 T 01-11-2018 DOE78_20440 6f05c54fd02fc419dd8bf0f76c6ea81d 386 SUPERFAMILY SSF53756 5 367 1.1E-43 T 01-11-2018 DOE78_20440 6f05c54fd02fc419dd8bf0f76c6ea81d 386 Gene3D G3DSA:3.40.50.2000 199 367 8.2E-37 T 01-11-2018 DOE78_20440 6f05c54fd02fc419dd8bf0f76c6ea81d 386 Pfam PF00534 Glycosyl transferases group 1 221 369 4.0E-24 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 194 0.0075 T 01-11-2018 DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 8.2E-64 T 01-11-2018 DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.8E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.8E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.8E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 4.8E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.8E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.8E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.5E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.5E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.5E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 Gene3D G3DSA:3.40.50.720 1 255 4.5E-82 T 01-11-2018 DOE78_15780 f5871dd8e606eed05698458c93d9ef56 257 SUPERFAMILY SSF51735 10 255 7.25E-84 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_14010 ca90d773d40ccedebedb76014575e08e 184 Gene3D G3DSA:3.40.630.30 3 183 2.3E-46 T 01-11-2018 DOE78_14010 ca90d773d40ccedebedb76014575e08e 184 SUPERFAMILY SSF55729 3 176 3.54E-50 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_14010 ca90d773d40ccedebedb76014575e08e 184 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 5.7E-30 T 01-11-2018 IPR000182 GNAT domain DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.3E-10 T 01-11-2018 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.3E-10 T 01-11-2018 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.3E-10 T 01-11-2018 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.3E-10 T 01-11-2018 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 Gene3D G3DSA:1.20.200.10 93 348 1.8E-104 T 01-11-2018 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 SUPERFAMILY SSF48557 3 427 7.38E-142 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 3.0E-27 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 3.0E-27 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 3.0E-27 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.0E-27 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 SMART SM00998 349 429 2.4E-40 T 01-11-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 3.4E-25 T 01-11-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 6.6E-184 T 01-11-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 Gene3D G3DSA:1.10.40.30 349 430 4.4E-34 T 01-11-2018 DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 Pfam PF00206 Lyase 6 286 8.0E-79 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal DOE78_01835 d4c432e0df2ff6671e83778688a6dbc2 430 Gene3D G3DSA:1.10.275.10 1 92 1.3E-40 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal DOE78_18420 081765e84421e929449e3dd023364156 311 PIRSF PIRSF005651 18 311 2.9E-96 T 01-11-2018 IPR010200 HflC GO:0016021|GO:0052547 DOE78_18420 081765e84421e929449e3dd023364156 311 TIGRFAM TIGR01932 hflC: HflC protein 28 305 7.1E-61 T 01-11-2018 IPR010200 HflC GO:0016021|GO:0052547 DOE78_18420 081765e84421e929449e3dd023364156 311 Pfam PF01145 SPFH domain / Band 7 family 45 219 6.6E-27 T 01-11-2018 IPR001107 Band 7 domain DOE78_18420 081765e84421e929449e3dd023364156 311 SUPERFAMILY SSF117892 73 213 1.19E-22 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily DOE78_18420 081765e84421e929449e3dd023364156 311 Gene3D G3DSA:3.30.479.30 70 209 1.9E-23 T 01-11-2018 DOE78_18420 081765e84421e929449e3dd023364156 311 SMART SM00244 41 208 5.1E-23 T 01-11-2018 IPR001107 Band 7 domain DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 76 98 3.4E-13 T 01-11-2018 DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 3.4E-13 T 01-11-2018 DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 3.4E-13 T 01-11-2018 DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 3.4E-13 T 01-11-2018 DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 Pfam PF07690 Major Facilitator Superfamily 17 408 8.5E-50 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 SUPERFAMILY SSF103473 6 495 2.22E-69 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 Gene3D G3DSA:1.20.1720.10 14 222 7.7E-40 T 01-11-2018 DOE78_02845 61e3d743e0bd56232efbcd1bf0cf0897 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 488 6.6E-129 T 01-11-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DOE78_07190 a50d200503008de5632c3e8ae2bfb169 384 Gene3D G3DSA:3.90.1150.10 29 375 1.9E-127 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_07190 a50d200503008de5632c3e8ae2bfb169 384 Gene3D G3DSA:3.40.640.10 58 278 1.9E-127 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_07190 a50d200503008de5632c3e8ae2bfb169 384 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DOE78_07190 a50d200503008de5632c3e8ae2bfb169 384 Pfam PF00155 Aminotransferase class I and II 29 375 2.4E-67 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_07190 a50d200503008de5632c3e8ae2bfb169 384 SUPERFAMILY SSF53383 5 382 3.54E-113 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 13 575 9.5E-257 T 01-11-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 Pfam PF02374 Anion-transporting ATPase 14 296 1.1E-74 T 01-11-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 Pfam PF02374 Anion-transporting ATPase 331 475 4.4E-33 T 01-11-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 SUPERFAMILY SSF52540 16 294 5.06E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 SUPERFAMILY SSF52540 320 586 5.4E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 PIRSF PIRSF001327 2 588 1.5E-262 T 01-11-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 Gene3D G3DSA:3.40.50.300 10 299 4.3E-80 T 01-11-2018 DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 Gene3D G3DSA:3.40.50.300 314 587 5.0E-68 T 01-11-2018 DOE78_22375 81d41711ad573d4b27aa68c9d0d0c698 588 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 17 297 3.0E-78 T 01-11-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.4E-38 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 SUPERFAMILY SSF56645 2 235 7.07E-82 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 PIRSF PIRSF016578 6 110 2.9E-4 T 01-11-2018 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 PIRSF PIRSF016578 126 361 7.2E-15 T 01-11-2018 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 SUPERFAMILY SSF47203 222 372 1.1E-60 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 371 2.0E-53 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 Gene3D G3DSA:1.10.540.10 1 119 2.1E-43 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 Gene3D G3DSA:1.20.140.10 229 372 1.8E-58 T 01-11-2018 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 331 350 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 Gene3D G3DSA:2.40.110.10 120 228 6.3E-43 T 01-11-2018 DOE78_23865 e2d99d28509a41379fd8f6156fbaecfe 372 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 211 1.6E-26 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DOE78_17835 ab719e558b50d8a89149d5362e387426 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 373 3.8E-186 T 01-11-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DOE78_17835 ab719e558b50d8a89149d5362e387426 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 365 7.6E-93 T 01-11-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DOE78_17835 ab719e558b50d8a89149d5362e387426 379 Gene3D G3DSA:3.20.20.105 2 373 1.1E-170 T 01-11-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DOE78_17835 ab719e558b50d8a89149d5362e387426 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 372 5.2E-175 T 01-11-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DOE78_17835 ab719e558b50d8a89149d5362e387426 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 57.924 T 01-11-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DOE78_17835 ab719e558b50d8a89149d5362e387426 379 SUPERFAMILY SSF51713 3 369 4.45E-162 T 01-11-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DOE78_17970 89eeb962d41f78747fbf0713b3996cce 293 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 7 279 1.2E-58 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DOE78_17970 89eeb962d41f78747fbf0713b3996cce 293 Gene3D G3DSA:2.40.10.350 187 261 7.9E-29 T 01-11-2018 DOE78_17970 89eeb962d41f78747fbf0713b3996cce 293 Gene3D G3DSA:1.20.5.490 74 111 7.8E-6 T 01-11-2018 DOE78_17970 89eeb962d41f78747fbf0713b3996cce 293 Gene3D G3DSA:2.40.10.340 113 186 3.6E-23 T 01-11-2018 DOE78_17970 89eeb962d41f78747fbf0713b3996cce 293 Pfam PF04085 rod shape-determining protein MreC 123 273 5.6E-44 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DOE78_17970 89eeb962d41f78747fbf0713b3996cce 293 PIRSF PIRSF038471 1 288 8.2E-70 T 01-11-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DOE78_02860 5bede9c87d90ab248a735612963a5ddb 227 Pfam PF00005 ABC transporter 23 169 1.2E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_02860 5bede9c87d90ab248a735612963a5ddb 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_02860 5bede9c87d90ab248a735612963a5ddb 227 SUPERFAMILY SSF52540 3 222 3.01E-71 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_02860 5bede9c87d90ab248a735612963a5ddb 227 Gene3D G3DSA:3.40.50.300 1 226 4.5E-70 T 01-11-2018 DOE78_02860 5bede9c87d90ab248a735612963a5ddb 227 SMART SM00382 32 218 1.1E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_10415 2d5eaed62dbb286ec0d0c88703c3fd3c 132 Pfam PF12802 MarR family 35 96 1.7E-15 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10415 2d5eaed62dbb286ec0d0c88703c3fd3c 132 SMART SM00347 29 128 1.4E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10415 2d5eaed62dbb286ec0d0c88703c3fd3c 132 Gene3D G3DSA:1.10.10.10 4 131 2.2E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10415 2d5eaed62dbb286ec0d0c88703c3fd3c 132 SUPERFAMILY SSF46785 13 122 4.27E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10415 2d5eaed62dbb286ec0d0c88703c3fd3c 132 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.5E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10415 2d5eaed62dbb286ec0d0c88703c3fd3c 132 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.5E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10415 2d5eaed62dbb286ec0d0c88703c3fd3c 132 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 1.5E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_21050 4b4a8f19c6a05fa09d4f7d00d69109de 433 Gene3D G3DSA:3.20.20.450 190 429 1.6E-60 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_21050 4b4a8f19c6a05fa09d4f7d00d69109de 433 SMART SM00052 186 428 6.3E-50 T 01-11-2018 IPR001633 EAL domain DOE78_21050 4b4a8f19c6a05fa09d4f7d00d69109de 433 Pfam PF00563 EAL domain 194 423 3.6E-55 T 01-11-2018 IPR001633 EAL domain DOE78_21050 4b4a8f19c6a05fa09d4f7d00d69109de 433 SUPERFAMILY SSF141868 194 426 1.26E-59 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_03960 92cdca3dc5a56a620086e5190d6f7f4e 418 SUPERFAMILY SSF161098 167 404 9.81E-54 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03960 92cdca3dc5a56a620086e5190d6f7f4e 418 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 202 406 2.8E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_03960 92cdca3dc5a56a620086e5190d6f7f4e 418 SUPERFAMILY SSF160964 73 171 6.41E-7 T 01-11-2018 DOE78_03960 92cdca3dc5a56a620086e5190d6f7f4e 418 Gene3D G3DSA:1.10.3720.10 163 416 3.5E-64 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 Pfam PF01411 tRNA synthetases class II (A) 11 85 8.3E-11 T 01-11-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 SMART SM00863 177 219 1.6E-9 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 Gene3D G3DSA:3.10.310.40 278 389 1.4E-10 T 01-11-2018 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 177 217 8.6E-8 T 01-11-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 Gene3D G3DSA:3.30.980.10 82 236 1.6E-45 T 01-11-2018 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 Pfam PF02272 DHHA1 domain 258 377 2.3E-11 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 SUPERFAMILY SSF55186 85 225 4.58E-34 T 01-11-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 Gene3D G3DSA:2.40.30.130 1 81 4.3E-24 T 01-11-2018 DOE78_14785 4b57f8f16763b23290f813ccd3a6798e 393 SUPERFAMILY SSF50447 1 79 1.41E-18 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_19805 9caf98e771988b20901be1bf9408ebcc 273 Pfam PF01261 Xylose isomerase-like TIM barrel 38 224 7.5E-33 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_19805 9caf98e771988b20901be1bf9408ebcc 273 Gene3D G3DSA:3.20.20.150 1 267 6.4E-58 T 01-11-2018 DOE78_19805 9caf98e771988b20901be1bf9408ebcc 273 SUPERFAMILY SSF51658 31 267 2.49E-54 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_11240 98026fef0c97c289dfaf66d5ea50fa5e 172 Pfam PF00583 Acetyltransferase (GNAT) family 28 147 3.6E-19 T 01-11-2018 IPR000182 GNAT domain DOE78_11240 98026fef0c97c289dfaf66d5ea50fa5e 172 SUPERFAMILY SSF55729 1 161 5.4E-34 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_11240 98026fef0c97c289dfaf66d5ea50fa5e 172 Gene3D G3DSA:3.40.630.30 1 171 7.0E-49 T 01-11-2018 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 365 48.853 T 01-11-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 261 4.0E-97 T 01-11-2018 IPR006222 Aminomethyltransferase, folate-binding domain DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 SUPERFAMILY SSF101790 277 366 2.13E-26 T 01-11-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 SUPERFAMILY SSF103025 3 284 1.73E-100 T 01-11-2018 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 359 1.3E-25 T 01-11-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 Gene3D G3DSA:2.40.30.110 283 365 1.1E-30 T 01-11-2018 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 PIRSF PIRSF006487 1 368 3.5E-106 T 01-11-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 365 6.9E-144 T 01-11-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 Gene3D G3DSA:3.30.1360.120 6 238 1.1E-92 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 Gene3D G3DSA:3.30.70.1400 53 138 1.1E-92 T 01-11-2018 DOE78_17020 8992f671fda9e34d6f4e337acfa09e96 368 Gene3D G3DSA:4.10.1250.10 239 281 7.3E-18 T 01-11-2018 DOE78_05220 7304123058e4847b8a8b3c68415c9e65 431 SUPERFAMILY SSF53383 2 426 3.25E-122 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_05220 7304123058e4847b8a8b3c68415c9e65 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 9.7E-171 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DOE78_05220 7304123058e4847b8a8b3c68415c9e65 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_05220 7304123058e4847b8a8b3c68415c9e65 431 Pfam PF00202 Aminotransferase class-III 35 413 4.3E-69 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_05220 7304123058e4847b8a8b3c68415c9e65 431 Gene3D G3DSA:3.90.1150.10 9 423 1.5E-167 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_05220 7304123058e4847b8a8b3c68415c9e65 431 Gene3D G3DSA:3.40.640.10 72 320 1.5E-167 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_05220 7304123058e4847b8a8b3c68415c9e65 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 93.761 T 01-11-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DOE78_12750 f5c4aa4f6c6c8ae0aca92dd72b1a6a78 96 SUPERFAMILY SSF52794 1 91 7.32E-20 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_12750 f5c4aa4f6c6c8ae0aca92dd72b1a6a78 96 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 86 9.5E-13 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_12750 f5c4aa4f6c6c8ae0aca92dd72b1a6a78 96 Gene3D G3DSA:3.40.50.2300 1 91 2.8E-21 T 01-11-2018 DOE78_10490 0c59a2a7eb7306774b71a971f95ba493 195 Gene3D G3DSA:2.60.40.730 82 194 3.6E-18 T 01-11-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 DOE78_10490 0c59a2a7eb7306774b71a971f95ba493 195 SMART SM00530 9 64 5.6E-11 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_10490 0c59a2a7eb7306774b71a971f95ba493 195 Gene3D G3DSA:1.10.260.40 3 81 1.2E-16 T 01-11-2018 DOE78_10490 0c59a2a7eb7306774b71a971f95ba493 195 Pfam PF01381 Helix-turn-helix 13 62 7.9E-14 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_10490 0c59a2a7eb7306774b71a971f95ba493 195 SUPERFAMILY SSF49367 118 193 3.01E-15 T 01-11-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 DOE78_10490 0c59a2a7eb7306774b71a971f95ba493 195 SUPERFAMILY SSF47413 3 70 3.94E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_05050 c260ccb2eee25b3837a816cb489903fb 327 Gene3D G3DSA:1.20.1260.10 173 318 1.9E-6 T 01-11-2018 IPR012347 Ferritin-like DOE78_05050 c260ccb2eee25b3837a816cb489903fb 327 Pfam PF11553 Protein of unknown function (DUF3231) 5 157 3.5E-28 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_05050 c260ccb2eee25b3837a816cb489903fb 327 Pfam PF11553 Protein of unknown function (DUF3231) 171 326 2.0E-48 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_03300 6c1777e29159b366a57d9680a2ba0d13 168 Hamap MF_01256 Putative metal-dependent hydrolase . 1 167 36.489 T 01-11-2018 IPR023774 Putative metal-dependent hydrolase YfiT DOE78_03300 6c1777e29159b366a57d9680a2ba0d13 168 Gene3D G3DSA:1.20.120.450 1 168 4.8E-50 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_03300 6c1777e29159b366a57d9680a2ba0d13 168 Pfam PF12867 DinB superfamily 33 163 2.0E-17 T 01-11-2018 IPR024775 DinB-like domain DOE78_03300 6c1777e29159b366a57d9680a2ba0d13 168 SUPERFAMILY SSF109854 3 165 5.49E-46 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_04010 5b3c32446e92cdd2a8f32f0d0ae96ab9 329 Gene3D G3DSA:3.40.50.720 3 264 1.1E-128 T 01-11-2018 DOE78_04010 5b3c32446e92cdd2a8f32f0d0ae96ab9 329 SUPERFAMILY SSF51735 1 328 3.03E-99 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_04010 5b3c32446e92cdd2a8f32f0d0ae96ab9 329 Gene3D G3DSA:3.90.25.10 185 320 1.1E-128 T 01-11-2018 DOE78_04010 5b3c32446e92cdd2a8f32f0d0ae96ab9 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 3.6E-60 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_04010 5b3c32446e92cdd2a8f32f0d0ae96ab9 329 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 326 4.0E-132 T 01-11-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DOE78_06955 2a497bcb69e3126387a966043264af7e 249 Pfam PF04542 Sigma-70 region 2 33 101 6.8E-9 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_06955 2a497bcb69e3126387a966043264af7e 249 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 19 243 3.3E-85 T 01-11-2018 IPR014244 RNA polymerase sigma-I type DOE78_06955 2a497bcb69e3126387a966043264af7e 249 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 14 245 28.413 T 01-11-2018 IPR014244 RNA polymerase sigma-I type DOE78_06955 2a497bcb69e3126387a966043264af7e 249 SUPERFAMILY SSF88946 21 101 1.96E-17 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_06955 2a497bcb69e3126387a966043264af7e 249 Gene3D G3DSA:1.10.1740.10 20 100 3.6E-9 T 01-11-2018 DOE78_06955 2a497bcb69e3126387a966043264af7e 249 PIRSF PIRSF038953 7 248 2.4E-66 T 01-11-2018 IPR014244 RNA polymerase sigma-I type DOE78_06955 2a497bcb69e3126387a966043264af7e 249 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 227 7.2E-13 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 410 3.3E-125 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 SUPERFAMILY SSF51735 6 199 3.67E-38 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 SUPERFAMILY SSF48179 206 299 1.14E-26 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 PIRSF PIRSF000124 6 419 6.2E-59 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 SUPERFAMILY SSF52413 317 414 1.96E-22 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 Gene3D G3DSA:3.40.50.720 206 419 1.3E-53 T 01-11-2018 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 Gene3D G3DSA:3.40.50.720 1 201 1.3E-52 T 01-11-2018 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 SMART SM00984 319 414 3.4E-24 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 207 297 1.5E-24 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 PIRSF PIRSF500136 1 421 2.5E-141 T 01-11-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 412 3.4E-21 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_09590 d52891a2df6a563617c62c35e62c2c14 421 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 188 1.9E-38 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_22065 2fb4f6d4543749cb7c9197668e18b97e 188 Pfam PF11611 Domain of unknown function (DUF4352) 64 179 4.7E-23 T 01-11-2018 IPR029051 Domain of unknown function DUF4352 DOE78_22065 2fb4f6d4543749cb7c9197668e18b97e 188 Gene3D G3DSA:2.60.40.1240 49 175 2.0E-25 T 01-11-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily DOE78_17920 70253f42df080823bcf64da56ddd7373 181 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 6 57 1.3E-18 T 01-11-2018 IPR039506 SpoOB, alpha-helical domain DOE78_17920 70253f42df080823bcf64da56ddd7373 181 Gene3D G3DSA:1.10.287.130 1 57 1.4E-23 T 01-11-2018 DOE78_17920 70253f42df080823bcf64da56ddd7373 181 SUPERFAMILY SSF55890 1 173 7.45E-39 T 01-11-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DOE78_17920 70253f42df080823bcf64da56ddd7373 181 SMART SM01317 59 173 1.9E-11 T 01-11-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal DOE78_17920 70253f42df080823bcf64da56ddd7373 181 Gene3D G3DSA:3.30.565.30 58 176 2.2E-25 T 01-11-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily DOE78_17920 70253f42df080823bcf64da56ddd7373 181 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 60 171 2.3E-23 T 01-11-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal DOE78_00195 e074168d262b124edfc4df7986ed5435 211 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 01-11-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DOE78_00195 e074168d262b124edfc4df7986ed5435 211 SUPERFAMILY SSF52540 1 209 2.52E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00195 e074168d262b124edfc4df7986ed5435 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 198 4.7E-64 T 01-11-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DOE78_00195 e074168d262b124edfc4df7986ed5435 211 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 31.169 T 01-11-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DOE78_00195 e074168d262b124edfc4df7986ed5435 211 Pfam PF02223 Thymidylate kinase 9 199 4.9E-56 T 01-11-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DOE78_00195 e074168d262b124edfc4df7986ed5435 211 Gene3D G3DSA:3.40.50.300 1 210 2.4E-68 T 01-11-2018 DOE78_12215 157ed5f85c7bb12d262cc2dea5c35d4d 316 Gene3D G3DSA:1.10.3720.10 69 316 4.5E-58 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12215 157ed5f85c7bb12d262cc2dea5c35d4d 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 292 1.4E-13 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12215 157ed5f85c7bb12d262cc2dea5c35d4d 316 SUPERFAMILY SSF161098 73 300 3.01E-47 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_23380 ba63092e607c885ded2235d20443440c 204 SUPERFAMILY SSF50729 14 203 5.16E-64 T 01-11-2018 DOE78_23380 ba63092e607c885ded2235d20443440c 204 Pfam PF08000 Bacterial PH domain 10 132 1.4E-35 T 01-11-2018 IPR012544 Bacterial Pleckstrin homology domain DOE78_23380 ba63092e607c885ded2235d20443440c 204 Pfam PF11724 YvbH-like oligomerisation region 145 204 6.0E-24 T 01-11-2018 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain DOE78_23380 ba63092e607c885ded2235d20443440c 204 Gene3D G3DSA:1.10.287.210 116 204 1.4E-32 T 01-11-2018 DOE78_23380 ba63092e607c885ded2235d20443440c 204 Gene3D G3DSA:2.30.29.50 12 115 5.9E-46 T 01-11-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 SUPERFAMILY SSF52540 310 509 5.07E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 Pfam PF12848 ABC transporter 229 314 3.7E-21 T 01-11-2018 IPR032781 ABC-transporter extension domain DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 Gene3D G3DSA:3.40.50.300 288 515 1.9E-45 T 01-11-2018 DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 Gene3D G3DSA:3.40.50.300 2 284 2.4E-69 T 01-11-2018 DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 Pfam PF00005 ABC transporter 341 468 1.7E-23 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 Pfam PF00005 ABC transporter 20 190 1.8E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 SUPERFAMILY SSF52540 5 244 3.1E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 SMART SM00382 348 517 2.2E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03675 06dedb2ebc7cd5d7f64374742d256641 517 SMART SM00382 28 235 3.5E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08295 b24e692e63235f2a4876f426b5f52552 213 Pfam PF04509 CheC-like family 111 148 3.0E-11 T 01-11-2018 IPR007597 CheC-like protein GO:0016787 DOE78_08295 b24e692e63235f2a4876f426b5f52552 213 Pfam PF04509 CheC-like family 10 47 2.0E-15 T 01-11-2018 IPR007597 CheC-like protein GO:0016787 DOE78_08295 b24e692e63235f2a4876f426b5f52552 213 Gene3D G3DSA:3.40.1550.10 5 211 3.2E-61 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_08295 b24e692e63235f2a4876f426b5f52552 213 SUPERFAMILY SSF103039 6 209 1.06E-52 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_21855 a5b7b922024982f7a096e87c8c8ae5d3 370 Pfam PF13407 Periplasmic binding protein domain 61 314 5.4E-35 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_21855 a5b7b922024982f7a096e87c8c8ae5d3 370 Gene3D G3DSA:3.40.50.2300 156 327 2.9E-76 T 01-11-2018 DOE78_21855 a5b7b922024982f7a096e87c8c8ae5d3 370 Gene3D G3DSA:3.40.50.2300 54 321 2.9E-76 T 01-11-2018 DOE78_21855 a5b7b922024982f7a096e87c8c8ae5d3 370 SUPERFAMILY SSF53822 52 332 4.21E-53 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_18370 0f2f7e6f446aee043e435426de3db255 312 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 4.0E-30 T 01-11-2018 IPR009928 Primosomal DnaI, N-terminal DOE78_18370 0f2f7e6f446aee043e435426de3db255 312 SUPERFAMILY SSF52540 140 276 7.85E-20 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18370 0f2f7e6f446aee043e435426de3db255 312 Pfam PF01695 IstB-like ATP binding protein 162 276 6.0E-12 T 01-11-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 DOE78_18370 0f2f7e6f446aee043e435426de3db255 312 SMART SM00382 162 299 5.0E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18370 0f2f7e6f446aee043e435426de3db255 312 Gene3D G3DSA:3.40.50.300 108 305 4.0E-53 T 01-11-2018 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 8.2E-156 T 01-11-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 256 2.6E-34 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 SUPERFAMILY SSF88659 114 190 3.31E-17 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 SUPERFAMILY SSF88946 6 110 1.31E-33 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 Gene3D G3DSA:1.20.120.1810 3 110 6.1E-26 T 01-11-2018 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 257 2.9E-83 T 01-11-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 Pfam PF04539 Sigma-70 region 3 124 173 6.3E-8 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PRINTS PR00046 Major sigma-70 factor signature 227 242 2.7E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PRINTS PR00046 Major sigma-70 factor signature 90 98 2.7E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PRINTS PR00046 Major sigma-70 factor signature 242 253 2.7E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PRINTS PR00046 Major sigma-70 factor signature 66 79 2.7E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PRINTS PR00046 Major sigma-70 factor signature 210 222 2.7E-12 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 Gene3D G3DSA:1.20.140.160 113 259 1.1E-25 T 01-11-2018 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 Pfam PF04545 Sigma-70, region 4 207 253 6.8E-13 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 SUPERFAMILY SSF88659 175 257 1.85E-16 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PIRSF PIRSF000770 113 157 0.42 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PIRSF PIRSF000770 158 259 1.6E-14 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 PIRSF PIRSF000770 13 121 3.9E-18 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_07770 185f0ccd99cfa0ceccf413ee9cce9f30 259 Pfam PF04542 Sigma-70 region 2 42 110 4.5E-17 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_22825 ff21582a6c75b73ad148c0cd17613c20 186 Gene3D G3DSA:3.30.505.50 140 185 2.5E-27 T 01-11-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily DOE78_22825 ff21582a6c75b73ad148c0cd17613c20 186 Gene3D G3DSA:3.30.160.100 1 109 6.9E-33 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like DOE78_22825 ff21582a6c75b73ad148c0cd17613c20 186 SUPERFAMILY SSF69754 2 110 1.57E-34 T 01-11-2018 IPR036567 Ribosome hibernation promotion factor-like DOE78_22825 ff21582a6c75b73ad148c0cd17613c20 186 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 186 25.385 T 01-11-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid DOE78_22825 ff21582a6c75b73ad148c0cd17613c20 186 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 129 182 2.3E-28 T 01-11-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal DOE78_22825 ff21582a6c75b73ad148c0cd17613c20 186 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 3.8E-31 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DOE78_22825 ff21582a6c75b73ad148c0cd17613c20 186 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 5.8E-37 T 01-11-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DOE78_20800 a1778429ee9b071c17b4587107994b21 86 SUPERFAMILY SSF116922 6 82 3.4E-23 T 01-11-2018 IPR023162 Apc36109-like domain superfamily DOE78_20800 a1778429ee9b071c17b4587107994b21 86 Gene3D G3DSA:1.10.340.20 1 86 4.4E-34 T 01-11-2018 IPR023162 Apc36109-like domain superfamily DOE78_20800 a1778429ee9b071c17b4587107994b21 86 Pfam PF08958 Domain of unknown function (DUF1871) 11 85 5.3E-30 T 01-11-2018 IPR015053 Protein of unknown function DUF1871 DOE78_20800 a1778429ee9b071c17b4587107994b21 86 ProDom PD062625 YUGE 10 86 4.0E-15 T 01-11-2018 IPR015053 Protein of unknown function DUF1871 DOE78_05410 6a572c511f731dc9b8502bef1ccba965 247 Gene3D G3DSA:3.40.109.10 1 247 6.0E-75 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_05410 6a572c511f731dc9b8502bef1ccba965 247 PIRSF PIRSF005426 1 247 1.8E-87 T 01-11-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 DOE78_05410 6a572c511f731dc9b8502bef1ccba965 247 Pfam PF00881 Nitroreductase family 8 165 1.4E-23 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DOE78_05410 6a572c511f731dc9b8502bef1ccba965 247 SUPERFAMILY SSF55469 2 245 1.44E-70 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 01-11-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 SUPERFAMILY SSF46911 7 78 1.16E-30 T 01-11-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 Gene3D G3DSA:4.10.640.10 3 78 2.6E-30 T 01-11-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 77 3.0E-22 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 Pfam PF01084 Ribosomal protein S18 23 73 3.4E-27 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 77 4.7E-37 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 4.8E-21 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 4.8E-21 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 4.8E-21 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 4.8E-21 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24625 ab8ee2e3fb47a9f76819c304d83dbaad 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 22.166 T 01-11-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_14195 9125251480118173788ad5ec3aa32e28 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 1.6E-122 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOE78_14195 9125251480118173788ad5ec3aa32e28 425 PIRSF PIRSF006066 1 425 4.9E-162 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DOE78_14195 9125251480118173788ad5ec3aa32e28 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 420 9.7E-139 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DOE78_08395 2a3bd2cc2cb64427619c0a2dc20ab9ad 93 Pfam PF04456 Protein of unknown function (DUF503) 3 87 3.7E-30 T 01-11-2018 IPR007546 Protein of unknown function DUF503 DOE78_08395 2a3bd2cc2cb64427619c0a2dc20ab9ad 93 Gene3D G3DSA:3.30.70.1120 1 92 1.2E-24 T 01-11-2018 IPR036746 TT1725-like superfamily DOE78_08395 2a3bd2cc2cb64427619c0a2dc20ab9ad 93 SUPERFAMILY SSF103007 1 93 8.37E-31 T 01-11-2018 IPR036746 TT1725-like superfamily DOE78_21165 eb8e88b6a07d4afdd39a7224e22fad90 437 Gene3D G3DSA:3.40.640.10 8 289 7.7E-101 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_21165 eb8e88b6a07d4afdd39a7224e22fad90 437 Gene3D G3DSA:3.90.1150.10 293 436 1.9E-50 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_21165 eb8e88b6a07d4afdd39a7224e22fad90 437 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 424 1.0E-197 T 01-11-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 DOE78_21165 eb8e88b6a07d4afdd39a7224e22fad90 437 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 424 9.6E-144 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_21165 eb8e88b6a07d4afdd39a7224e22fad90 437 SUPERFAMILY SSF53383 8 424 2.06E-127 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_21165 eb8e88b6a07d4afdd39a7224e22fad90 437 PIRSF PIRSF001434 1 427 1.2E-127 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_22380 3466db6d4020b2b9d0f49a4ab39bf1ca 117 Gene3D G3DSA:3.40.30.10 1 110 1.8E-41 T 01-11-2018 DOE78_22380 3466db6d4020b2b9d0f49a4ab39bf1ca 117 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 110 1.3E-41 T 01-11-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 Gene3D G3DSA:3.40.605.10 28 476 3.6E-182 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 32 479 9.4E-199 T 01-11-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 PIRSF PIRSF036492 32 483 1.9E-83 T 01-11-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 Pfam PF00171 Aldehyde dehydrogenase family 24 480 4.3E-173 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 Gene3D G3DSA:3.40.309.10 263 453 3.6E-182 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DOE78_21610 aadbcdc9804fdbd818a09cf0f1bcde68 487 SUPERFAMILY SSF53720 9 483 1.2E-172 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_13460 41e19ca6f82fb8d0abdc57a799a484f7 349 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 337 1.1E-142 T 01-11-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DOE78_13460 41e19ca6f82fb8d0abdc57a799a484f7 349 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 337 2.5E-126 T 01-11-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DOE78_13460 41e19ca6f82fb8d0abdc57a799a484f7 349 Gene3D G3DSA:3.40.50.10470 150 349 3.0E-71 T 01-11-2018 DOE78_13460 41e19ca6f82fb8d0abdc57a799a484f7 349 SUPERFAMILY SSF100950 5 343 6.14E-126 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_13460 41e19ca6f82fb8d0abdc57a799a484f7 349 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 348 41.131 T 01-11-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DOE78_13460 41e19ca6f82fb8d0abdc57a799a484f7 349 Gene3D G3DSA:1.20.120.420 2 149 6.2E-51 T 01-11-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 DOE78_13460 41e19ca6f82fb8d0abdc57a799a484f7 349 Pfam PF01008 Initiation factor 2 subunit family 48 337 2.5E-90 T 01-11-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 Pfam PF01479 S4 domain 6 48 2.5E-8 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 Gene3D G3DSA:3.10.290.10 1 64 2.2E-23 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 SUPERFAMILY SSF55174 5 71 7.51E-11 T 01-11-2018 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 Pfam PF01728 FtsJ-like methyltransferase 62 245 1.5E-18 T 01-11-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 1.3E-96 T 01-11-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 PIRSF PIRSF005578 1 268 4.7E-106 T 01-11-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 Gene3D G3DSA:3.40.50.150 65 280 2.6E-84 T 01-11-2018 DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 SUPERFAMILY SSF53335 55 244 9.14E-20 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_16835 31f232c8d765836dedc3ad53ee688b4b 280 SMART SM00363 6 71 8.8E-8 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_19880 8f1d2ddbff2e500cd2ca138f58884dff 122 SUPERFAMILY SSF52833 15 116 7.47E-22 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_19880 8f1d2ddbff2e500cd2ca138f58884dff 122 Pfam PF08534 Redoxin 16 114 4.3E-10 T 01-11-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DOE78_19880 8f1d2ddbff2e500cd2ca138f58884dff 122 Gene3D G3DSA:3.40.30.10 9 121 1.8E-26 T 01-11-2018 DOE78_19880 8f1d2ddbff2e500cd2ca138f58884dff 122 ProSitePatterns PS01265 Tpx family signature. 39 50 - T 01-11-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 DOE78_12925 7a2c3b3d59ccb13e548921302c4e9622 447 Gene3D G3DSA:1.20.1250.20 2 197 9.7E-40 T 01-11-2018 DOE78_12925 7a2c3b3d59ccb13e548921302c4e9622 447 Gene3D G3DSA:1.20.1250.20 244 443 1.3E-21 T 01-11-2018 DOE78_12925 7a2c3b3d59ccb13e548921302c4e9622 447 Pfam PF07690 Major Facilitator Superfamily 12 295 2.4E-43 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_12925 7a2c3b3d59ccb13e548921302c4e9622 447 SUPERFAMILY SSF103473 8 440 1.96E-69 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_12925 7a2c3b3d59ccb13e548921302c4e9622 447 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 76 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_18555 a20eda0c83788f699ad07659e5728b0a 692 Pfam PF00912 Transglycosylase 67 241 1.7E-63 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_18555 a20eda0c83788f699ad07659e5728b0a 692 SUPERFAMILY SSF56601 222 624 7.65E-108 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_18555 a20eda0c83788f699ad07659e5728b0a 692 Gene3D G3DSA:3.40.710.10 268 620 2.2E-127 T 01-11-2018 DOE78_18555 a20eda0c83788f699ad07659e5728b0a 692 Gene3D G3DSA:1.10.3810.10 59 256 5.3E-78 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_18555 a20eda0c83788f699ad07659e5728b0a 692 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 79 617 2.1E-189 T 01-11-2018 DOE78_18555 a20eda0c83788f699ad07659e5728b0a 692 Pfam PF00905 Penicillin binding protein transpeptidase domain 338 614 6.3E-36 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_18555 a20eda0c83788f699ad07659e5728b0a 692 SUPERFAMILY SSF53955 56 261 8.44E-74 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_08815 ac4e8d27d692dea7c64eb6cf7852d4ac 76 Pfam PF00480 ROK family 18 60 1.6E-6 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_08815 ac4e8d27d692dea7c64eb6cf7852d4ac 76 Gene3D G3DSA:3.30.420.40 18 66 1.1E-10 T 01-11-2018 DOE78_09755 c9cb8b9f6fbf1244974e68e82446b39b 336 Pfam PF11553 Protein of unknown function (DUF3231) 170 332 2.6E-46 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_09755 c9cb8b9f6fbf1244974e68e82446b39b 336 Pfam PF11553 Protein of unknown function (DUF3231) 6 160 7.1E-50 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_09755 c9cb8b9f6fbf1244974e68e82446b39b 336 Gene3D G3DSA:1.20.1260.10 1 148 3.1E-12 T 01-11-2018 IPR012347 Ferritin-like DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 SUPERFAMILY SSF52374 2 324 7.16E-101 T 01-11-2018 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 Pfam PF00579 tRNA synthetases class I (W and Y) 3 280 6.9E-85 T 01-11-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 01-11-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 Gene3D G3DSA:3.40.50.620 4 323 1.1E-142 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 8.5E-30 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 8.5E-30 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 8.5E-30 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 8.5E-30 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 Gene3D G3DSA:1.10.240.10 183 293 1.1E-142 T 01-11-2018 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 324 1.6E-124 T 01-11-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DOE78_06590 168317508bba1a68fd88259d3c82dfae 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 325 42.606 T 01-11-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DOE78_18265 9c225cdca32dcae03414ebb84167a1ca 567 SUPERFAMILY SSF56801 24 554 1.24E-163 T 01-11-2018 DOE78_18265 9c225cdca32dcae03414ebb84167a1ca 567 Pfam PF00501 AMP-binding enzyme 32 460 5.8E-117 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_18265 9c225cdca32dcae03414ebb84167a1ca 567 Gene3D G3DSA:3.30.300.310 457 560 2.0E-34 T 01-11-2018 DOE78_18265 9c225cdca32dcae03414ebb84167a1ca 567 Gene3D G3DSA:3.40.50.12780 13 452 4.8E-133 T 01-11-2018 DOE78_18265 9c225cdca32dcae03414ebb84167a1ca 567 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_18265 9c225cdca32dcae03414ebb84167a1ca 567 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 4.8E-21 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_09585 842d795048aa1cacfeb62b1cd3821797 322 SUPERFAMILY SSF51735 3 321 1.06E-80 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_09585 842d795048aa1cacfeb62b1cd3821797 322 Gene3D G3DSA:3.40.50.720 6 322 1.5E-97 T 01-11-2018 DOE78_09585 842d795048aa1cacfeb62b1cd3821797 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 245 9.7E-55 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_09585 842d795048aa1cacfeb62b1cd3821797 322 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 5.8E-5 T 01-11-2018 DOE78_09585 842d795048aa1cacfeb62b1cd3821797 322 PRINTS PR01713 Nucleotide sugar epimerase signature 284 301 5.8E-5 T 01-11-2018 DOE78_09585 842d795048aa1cacfeb62b1cd3821797 322 PRINTS PR01713 Nucleotide sugar epimerase signature 239 254 5.8E-5 T 01-11-2018 DOE78_05175 f492729eb3cfcc78faf59d681f37569d 176 SUPERFAMILY SSF159234 5 171 9.94E-31 T 01-11-2018 IPR035930 FomD-like superfamily DOE78_05175 f492729eb3cfcc78faf59d681f37569d 176 Gene3D G3DSA:2.40.380.10 2 170 3.4E-10 T 01-11-2018 IPR035930 FomD-like superfamily DOE78_05175 f492729eb3cfcc78faf59d681f37569d 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 1.4E-16 T 01-11-2018 IPR007295 Domain of unknown function DUF402 DOE78_05175 f492729eb3cfcc78faf59d681f37569d 176 PIRSF PIRSF028345 1 176 1.8E-79 T 01-11-2018 IPR016882 Uncharacterised protein family UPF0374 DOE78_05175 f492729eb3cfcc78faf59d681f37569d 176 Hamap MF_01568 UPF0374 protein . 1 175 51.617 T 01-11-2018 IPR016882 Uncharacterised protein family UPF0374 DOE78_07990 1d91442b73f2821718a12f5429367106 298 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 288 1.6E-145 T 01-11-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DOE78_07990 1d91442b73f2821718a12f5429367106 298 Pfam PF03313 Serine dehydratase alpha chain 15 274 2.8E-76 T 01-11-2018 IPR005130 Serine dehydratase-like, alpha subunit DOE78_13795 a7977b111aeadfb19b5dd6246d33a357 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 171 6.6E-27 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_13795 a7977b111aeadfb19b5dd6246d33a357 182 Gene3D G3DSA:1.10.1740.10 3 113 2.1E-21 T 01-11-2018 DOE78_13795 a7977b111aeadfb19b5dd6246d33a357 182 Pfam PF04542 Sigma-70 region 2 20 83 1.7E-13 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_13795 a7977b111aeadfb19b5dd6246d33a357 182 SUPERFAMILY SSF88659 113 172 2.83E-15 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_13795 a7977b111aeadfb19b5dd6246d33a357 182 Pfam PF08281 Sigma-70, region 4 119 168 3.8E-15 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_13795 a7977b111aeadfb19b5dd6246d33a357 182 Gene3D G3DSA:1.10.10.10 114 173 1.6E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13795 a7977b111aeadfb19b5dd6246d33a357 182 SUPERFAMILY SSF88946 10 90 5.89E-20 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_02135 e8ca91b4506a60892d821fe266a4365b 247 Gene3D G3DSA:1.10.3720.10 5 230 1.7E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02135 e8ca91b4506a60892d821fe266a4365b 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 227 4.8E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_02135 e8ca91b4506a60892d821fe266a4365b 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 122 1.5E-19 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DOE78_02135 e8ca91b4506a60892d821fe266a4365b 247 SUPERFAMILY SSF161098 14 216 2.62E-44 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_05455 5ac8ca8415f4e06b5cad73b79e790a20 269 Pfam PF02602 Uroporphyrinogen-III synthase HemD 18 259 1.5E-38 T 01-11-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_05455 5ac8ca8415f4e06b5cad73b79e790a20 269 Gene3D G3DSA:3.40.50.10090 37 175 1.1E-70 T 01-11-2018 DOE78_05455 5ac8ca8415f4e06b5cad73b79e790a20 269 SUPERFAMILY SSF69618 7 268 6.54E-51 T 01-11-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_05455 5ac8ca8415f4e06b5cad73b79e790a20 269 Gene3D G3DSA:3.40.50.10090 13 259 1.1E-70 T 01-11-2018 DOE78_16935 a35be07be86f46480468ae9d181edf0e 68 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 62 1.2E-17 T 01-11-2018 IPR025664 Stage III sporulation protein AC/AD family DOE78_16935 a35be07be86f46480468ae9d181edf0e 68 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 4.0E-31 T 01-11-2018 IPR009570 Stage III sporulation protein AC DOE78_04705 4038b675f794ab7a340d62760bfa4e01 297 SUPERFAMILY SSF47240 1 294 5.35E-94 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_04705 4038b675f794ab7a340d62760bfa4e01 297 Gene3D G3DSA:1.20.1260.130 2 297 7.3E-109 T 01-11-2018 DOE78_04705 4038b675f794ab7a340d62760bfa4e01 297 Pfam PF05067 Manganese containing catalase 1 296 1.7E-91 T 01-11-2018 IPR007760 Manganese catalase DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 7.1E-34 T 01-11-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 SUPERFAMILY SSF56059 102 319 1.34E-62 T 01-11-2018 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 417 2.4E-163 T 01-11-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 43.01 T 01-11-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 415 9.6E-26 T 01-11-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Gene3D G3DSA:3.40.50.20 2 93 1.8E-35 T 01-11-2018 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Gene3D G3DSA:3.90.600.10 325 424 2.4E-30 T 01-11-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 SUPERFAMILY SSF51246 324 417 7.85E-28 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 SMART SM01210 325 417 3.5E-42 T 01-11-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 SMART SM01209 101 293 2.1E-129 T 01-11-2018 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 01-11-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Gene3D G3DSA:3.30.470.20 189 324 2.4E-57 T 01-11-2018 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 SUPERFAMILY SSF52440 1 101 1.73E-33 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.1E-81 T 01-11-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DOE78_01880 221a18ae3dfde28a3ff9a147bd34f904 425 Gene3D G3DSA:3.30.1490.20 119 188 3.4E-27 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_17545 5c979744b861aa7e5e551f7e6dbb4dcd 165 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 5 147 1.4E-66 T 01-11-2018 IPR013404 Competence operon E, ComEB DOE78_17545 5c979744b861aa7e5e551f7e6dbb4dcd 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 107 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DOE78_17545 5c979744b861aa7e5e551f7e6dbb4dcd 165 Gene3D G3DSA:3.40.140.10 4 150 5.6E-47 T 01-11-2018 DOE78_17545 5c979744b861aa7e5e551f7e6dbb4dcd 165 SUPERFAMILY SSF53927 9 144 1.43E-38 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 DOE78_17545 5c979744b861aa7e5e551f7e6dbb4dcd 165 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 118 3.0E-27 T 01-11-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE78_17545 5c979744b861aa7e5e551f7e6dbb4dcd 165 PIRSF PIRSF006019 1 153 8.8E-53 T 01-11-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DOE78_10360 4fc0795b63f850953405b75860a1c87d 429 Pfam PF00860 Permease family 17 388 5.3E-55 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DOE78_10360 4fc0795b63f850953405b75860a1c87d 429 PIRSF PIRSF005353 1 428 9.9E-165 T 01-11-2018 IPR026033 Purine permease PbuG-like DOE78_08455 47fc450da193df7c0c828271baab2912 406 Pfam PF13840 ACT domain 335 398 9.1E-22 T 01-11-2018 IPR027795 CASTOR, ACT domain DOE78_08455 47fc450da193df7c0c828271baab2912 406 SUPERFAMILY SSF53633 3 246 3.4E-68 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_08455 47fc450da193df7c0c828271baab2912 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 2.9E-140 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_08455 47fc450da193df7c0c828271baab2912 406 Pfam PF00696 Amino acid kinase family 3 235 2.2E-44 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DOE78_08455 47fc450da193df7c0c828271baab2912 406 Gene3D G3DSA:3.30.2130.10 256 406 4.0E-35 T 01-11-2018 DOE78_08455 47fc450da193df7c0c828271baab2912 406 SUPERFAMILY SSF55021 334 403 8.1E-17 T 01-11-2018 DOE78_08455 47fc450da193df7c0c828271baab2912 406 Gene3D G3DSA:3.40.1160.10 1 255 4.8E-82 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_08455 47fc450da193df7c0c828271baab2912 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 401 6.4E-94 T 01-11-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_08455 47fc450da193df7c0c828271baab2912 406 SUPERFAMILY SSF55021 260 346 1.07E-14 T 01-11-2018 DOE78_08455 47fc450da193df7c0c828271baab2912 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 01-11-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_08455 47fc450da193df7c0c828271baab2912 406 PIRSF PIRSF000726 60 406 1.7E-92 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_08455 47fc450da193df7c0c828271baab2912 406 PIRSF PIRSF000726 1 65 1.0E-9 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_08020 1200113e24b605667aba628a24022e28 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 77 1.7E-34 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DOE78_08020 1200113e24b605667aba628a24022e28 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.958 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DOE78_08020 1200113e24b605667aba628a24022e28 77 SUPERFAMILY SSF47336 2 76 1.96E-22 T 01-11-2018 IPR036736 ACP-like superfamily DOE78_08020 1200113e24b605667aba628a24022e28 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.5E-15 T 01-11-2018 IPR009081 Phosphopantetheine binding ACP domain DOE78_08020 1200113e24b605667aba628a24022e28 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 55 75 0.003 T 01-11-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DOE78_08020 1200113e24b605667aba628a24022e28 77 Gene3D G3DSA:1.10.1200.10 1 76 5.2E-29 T 01-11-2018 IPR036736 ACP-like superfamily DOE78_08020 1200113e24b605667aba628a24022e28 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 01-11-2018 IPR006162 Phosphopantetheine attachment site DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.9E-31 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 SMART SM00357 3 66 4.9E-32 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 SUPERFAMILY SSF50249 1 64 3.62E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 01-11-2018 IPR019844 Cold-shock conserved site DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 PIRSF PIRSF002599 1 66 3.3E-25 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 PRINTS PR00050 Cold shock protein signature 24 33 9.4E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 PRINTS PR00050 Cold shock protein signature 4 19 9.4E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 PRINTS PR00050 Cold shock protein signature 39 57 9.4E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_13200 be337dd68bbc2faacf9eee792203395f 66 Gene3D G3DSA:2.40.50.140 1 66 7.9E-31 T 01-11-2018 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 Gene3D G3DSA:3.50.50.60 7 309 1.2E-84 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09925 ced08682bf914102baf915551e3f3bef 349 SUPERFAMILY SSF51905 4 319 7.38E-36 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 7.1E-26 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 7.1E-26 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 7.1E-26 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 7.1E-26 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 7.1E-26 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 202 218 7.1E-26 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 Gene3D G3DSA:3.50.50.60 127 248 1.2E-84 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 2.6E-18 T 01-11-2018 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 2.6E-18 T 01-11-2018 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 2.6E-18 T 01-11-2018 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.6E-18 T 01-11-2018 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-18 T 01-11-2018 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 307 1.8E-28 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_09925 ced08682bf914102baf915551e3f3bef 349 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 37.269 T 01-11-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 DOE78_09485 d456fd31eb95fdc822fdd0e9520c7d35 166 Gene3D G3DSA:3.40.630.30 1 166 5.0E-42 T 01-11-2018 DOE78_09485 d456fd31eb95fdc822fdd0e9520c7d35 166 SUPERFAMILY SSF55729 1 155 2.19E-28 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09485 d456fd31eb95fdc822fdd0e9520c7d35 166 Pfam PF00583 Acetyltransferase (GNAT) family 35 139 2.9E-17 T 01-11-2018 IPR000182 GNAT domain DOE78_11450 60f17e19a4c159c39b80819cdcf3e3cc 332 Gene3D G3DSA:3.40.1350.10 19 130 3.8E-7 T 01-11-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DOE78_13920 452e7a00fd8db4f241e68057c191709a 158 Gene3D G3DSA:1.10.10.2520 9 100 5.6E-10 T 01-11-2018 DOE78_13920 452e7a00fd8db4f241e68057c191709a 158 Pfam PF07486 Cell Wall Hydrolase 25 146 7.7E-12 T 01-11-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DOE78_04745 0671557de70f71d3c872128d0a5dbedc 246 Pfam PF00005 ABC transporter 25 173 2.0E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04745 0671557de70f71d3c872128d0a5dbedc 246 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_04745 0671557de70f71d3c872128d0a5dbedc 246 SMART SM00382 34 228 1.3E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04745 0671557de70f71d3c872128d0a5dbedc 246 Gene3D G3DSA:3.40.50.300 3 246 6.0E-73 T 01-11-2018 DOE78_04745 0671557de70f71d3c872128d0a5dbedc 246 SUPERFAMILY SSF52540 5 227 1.18E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24295 7dc5634e91d5811ebb303b29709e6643 156 Gene3D G3DSA:3.40.140.10 2 156 2.6E-62 T 01-11-2018 DOE78_24295 7dc5634e91d5811ebb303b29709e6643 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 101 2.4E-23 T 01-11-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE78_24295 7dc5634e91d5811ebb303b29709e6643 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DOE78_24295 7dc5634e91d5811ebb303b29709e6643 156 SUPERFAMILY SSF53927 5 134 7.7E-43 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 Pfam PF07730 Histidine kinase 169 230 5.3E-10 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 SUPERFAMILY SSF55874 231 357 1.57E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 Gene3D G3DSA:3.30.565.10 227 357 9.7E-30 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 SMART SM00387 267 357 5.6E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 Pfam PF08447 PAS fold 57 141 7.0E-15 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 SUPERFAMILY SSF55785 43 142 2.09E-28 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 SMART SM00086 106 148 2.0E-9 T 01-11-2018 IPR001610 PAC motif DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 155 2.6E-16 T 01-11-2018 IPR000014 PAS domain DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 268 357 1.0E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_14670 ed3d842a9e0273a6c589f7f4703d1a84 357 Gene3D G3DSA:3.30.450.20 31 185 2.3E-34 T 01-11-2018 DOE78_14150 c697ad86ee413a6d1860459071a9d0f0 698 Gene3D G3DSA:3.60.15.10 290 514 3.2E-22 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_14150 c697ad86ee413a6d1860459071a9d0f0 698 SMART SM00849 310 489 1.5E-10 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_14150 c697ad86ee413a6d1860459071a9d0f0 698 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 203 271 2.4E-14 T 01-11-2018 DOE78_14150 c697ad86ee413a6d1860459071a9d0f0 698 Pfam PF00395 S-layer homology domain 72 114 6.1E-10 T 01-11-2018 IPR001119 S-layer homology domain DOE78_14150 c697ad86ee413a6d1860459071a9d0f0 698 Pfam PF00395 S-layer homology domain 131 173 1.8E-9 T 01-11-2018 IPR001119 S-layer homology domain DOE78_14150 c697ad86ee413a6d1860459071a9d0f0 698 Pfam PF12733 Cadherin-like beta sandwich domain 611 697 4.7E-11 T 01-11-2018 IPR025883 Cadherin-like beta sandwich domain DOE78_14150 c697ad86ee413a6d1860459071a9d0f0 698 SUPERFAMILY SSF56281 311 509 1.49E-18 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_10275 287e6fae066c5cca6ccaba10ff13406f 274 Gene3D G3DSA:1.10.3720.10 73 263 7.4E-28 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_10275 287e6fae066c5cca6ccaba10ff13406f 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 269 2.4E-27 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_10275 287e6fae066c5cca6ccaba10ff13406f 274 SUPERFAMILY SSF161098 72 259 2.62E-36 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.8E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.8E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.8E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.8E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.8E-51 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 1.1E-108 T 01-11-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 SUPERFAMILY SSF51735 5 247 2.17E-97 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.9E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.9E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.9E-15 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 1.6E-6 T 01-11-2018 DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 1.1E-75 T 01-11-2018 DOE78_08015 17d7f79cd10444520e00896f9426a5a9 247 Gene3D G3DSA:3.40.50.720 4 247 3.4E-94 T 01-11-2018 DOE78_18250 c722206085c758c037b0dafb2ed95f11 257 SUPERFAMILY SSF52402 1 244 2.41E-77 T 01-11-2018 DOE78_18250 c722206085c758c037b0dafb2ed95f11 257 PIRSF PIRSF000090 1 257 2.1E-77 T 01-11-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DOE78_18250 c722206085c758c037b0dafb2ed95f11 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 01-11-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DOE78_18250 c722206085c758c037b0dafb2ed95f11 257 Pfam PF01012 Electron transfer flavoprotein domain 23 206 1.7E-49 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_18250 c722206085c758c037b0dafb2ed95f11 257 Gene3D G3DSA:3.40.50.620 1 256 1.3E-83 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_18250 c722206085c758c037b0dafb2ed95f11 257 SMART SM00893 21 211 3.3E-61 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_17935 9a5e36e6f5699a33371547f33cc23d90 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 5.1E-41 T 01-11-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17935 9a5e36e6f5699a33371547f33cc23d90 102 SUPERFAMILY SSF141091 1 101 2.09E-39 T 01-11-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17935 9a5e36e6f5699a33371547f33cc23d90 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-40 T 01-11-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17935 9a5e36e6f5699a33371547f33cc23d90 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 27.686 T 01-11-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17935 9a5e36e6f5699a33371547f33cc23d90 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 01-11-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 Pfam PF00171 Aldehyde dehydrogenase family 9 285 9.2E-15 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 9 420 40.465 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 Gene3D G3DSA:3.40.309.10 230 378 2.9E-160 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 SUPERFAMILY SSF53720 9 420 2.36E-109 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 17 410 9.3E-154 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 PIRSF PIRSF000151 2 420 4.2E-171 T 01-11-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 Gene3D G3DSA:3.40.605.10 22 415 2.9E-160 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_24440 c7c814067043a4432e6a4b621d94b118 420 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 348 - T 01-11-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_13300 9b6898a3058553bb1a2298192f1f103c 209 Gene3D G3DSA:3.40.50.720 4 130 1.5E-35 T 01-11-2018 DOE78_13300 9b6898a3058553bb1a2298192f1f103c 209 SUPERFAMILY SSF75615 110 206 9.94E-20 T 01-11-2018 DOE78_13300 9b6898a3058553bb1a2298192f1f103c 209 Gene3D G3DSA:1.10.8.610 131 203 9.2E-16 T 01-11-2018 DOE78_13300 9b6898a3058553bb1a2298192f1f103c 209 SUPERFAMILY SSF51735 4 108 9.0E-17 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13300 9b6898a3058553bb1a2298192f1f103c 209 Pfam PF13241 Putative NAD(P)-binding 7 115 1.1E-22 T 01-11-2018 DOE78_13300 9b6898a3058553bb1a2298192f1f103c 209 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 190 6.1E-38 T 01-11-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_13300 9b6898a3058553bb1a2298192f1f103c 209 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.7E-8 T 01-11-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_06015 80648fe7040a657ec503c38192856a96 216 Gene3D G3DSA:3.40.50.12740 2 208 6.6E-71 T 01-11-2018 DOE78_06015 80648fe7040a657ec503c38192856a96 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_06015 80648fe7040a657ec503c38192856a96 216 SUPERFAMILY SSF46894 137 208 2.01E-22 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_06015 80648fe7040a657ec503c38192856a96 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 2.3E-18 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_06015 80648fe7040a657ec503c38192856a96 216 SMART SM00421 145 202 9.6E-25 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_06015 80648fe7040a657ec503c38192856a96 216 SMART SM00448 2 115 7.8E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_06015 80648fe7040a657ec503c38192856a96 216 Pfam PF00072 Response regulator receiver domain 5 116 9.8E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_06015 80648fe7040a657ec503c38192856a96 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 7.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_06015 80648fe7040a657ec503c38192856a96 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 7.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_06015 80648fe7040a657ec503c38192856a96 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 7.7E-14 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_06015 80648fe7040a657ec503c38192856a96 216 SUPERFAMILY SSF52172 1 134 2.28E-31 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_05060 e401d6dee7c4ee91ae509e149f25996f 337 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 226 7.3E-94 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DOE78_05060 e401d6dee7c4ee91ae509e149f25996f 337 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 2.1E-102 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DOE78_05060 e401d6dee7c4ee91ae509e149f25996f 337 PIRSF PIRSF000267 1 336 2.8E-114 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DOE78_10080 58e4a562652c6c29cf237f7f60961cc3 269 SUPERFAMILY SSF141571 51 244 1.2E-16 T 01-11-2018 DOE78_10080 58e4a562652c6c29cf237f7f60961cc3 269 Pfam PF00805 Pentapeptide repeats (8 copies) 205 240 8.3E-11 T 01-11-2018 IPR001646 Pentapeptide repeat DOE78_10080 58e4a562652c6c29cf237f7f60961cc3 269 Gene3D G3DSA:2.160.20.100 163 260 7.7E-17 T 01-11-2018 DOE78_17995 acc034e531854c0bf77d58032a085cf6 187 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 183 6.9E-62 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 DOE78_17995 acc034e531854c0bf77d58032a085cf6 187 Gene3D G3DSA:3.90.950.10 1 187 7.1E-73 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DOE78_17995 acc034e531854c0bf77d58032a085cf6 187 Pfam PF02545 Maf-like protein 4 183 4.5E-60 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 DOE78_17995 acc034e531854c0bf77d58032a085cf6 187 PIRSF PIRSF006305 1 186 1.2E-61 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 DOE78_17995 acc034e531854c0bf77d58032a085cf6 187 SUPERFAMILY SSF52972 2 183 5.89E-61 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DOE78_17995 acc034e531854c0bf77d58032a085cf6 187 Hamap MF_00528 Septum formation protein Maf [maf]. 3 187 29.182 T 01-11-2018 IPR003697 Maf-like protein GO:0047429 DOE78_11100 fd7e3615e7a6958ebdfd1c9fae98168f 271 Hamap MF_02077 Lipid II flippase Amj [amj]. 5 268 26.59 T 01-11-2018 IPR021260 Lipid II flippase Amj DOE78_11100 fd7e3615e7a6958ebdfd1c9fae98168f 271 Pfam PF10997 Alternate to MurJ 14 267 9.4E-97 T 01-11-2018 IPR021260 Lipid II flippase Amj DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 4.1E-42 T 01-11-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 SUPERFAMILY SSF55973 125 246 5.1E-54 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 Gene3D G3DSA:3.30.300.10 7 247 2.3E-180 T 01-11-2018 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 2.0E-70 T 01-11-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 SUPERFAMILY SSF55973 5 111 2.08E-45 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 PIRSF PIRSF000497 1 398 1.1E-178 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 SUPERFAMILY SSF55973 247 395 6.67E-71 T 01-11-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 9.8E-187 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 Gene3D G3DSA:3.30.300.10 13 284 2.3E-180 T 01-11-2018 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 01-11-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 Gene3D G3DSA:3.30.300.10 104 389 2.3E-180 T 01-11-2018 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 59.845 T 01-11-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_19470 a1e22643e06867e9a24a36afe6ff4289 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 1.6E-50 T 01-11-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 SUPERFAMILY SSF48008 86 222 5.75E-18 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 Pfam PF07729 FCD domain 90 215 4.6E-15 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 SMART SM00345 23 81 2.2E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 Gene3D G3DSA:1.20.120.530 84 220 4.5E-16 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 SMART SM00895 90 219 2.7E-5 T 01-11-2018 IPR011711 GntR, C-terminal DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 Gene3D G3DSA:1.10.10.10 16 81 7.9E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 80 7.1E-16 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 4.2E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 4.2E-6 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_03845 30cc7cd6f6473b506129e115c6960378 243 SUPERFAMILY SSF46785 14 84 5.01E-13 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 PIRSF PIRSF000292 1 307 2.2E-99 T 01-11-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 29 103 1.0E-10 T 01-11-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 SUPERFAMILY SSF81464 13 113 1.23E-23 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 Gene3D G3DSA:1.10.287.90 20 110 4.4E-28 T 01-11-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 PRINTS PR01166 Cytochrome c oxidase subunit II signature 92 112 3.3E-5 T 01-11-2018 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 PRINTS PR01166 Cytochrome c oxidase subunit II signature 185 202 3.3E-5 T 01-11-2018 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 PRINTS PR01166 Cytochrome c oxidase subunit II signature 80 92 3.3E-5 T 01-11-2018 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 14 234 2.8E-90 T 01-11-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 Gene3D G3DSA:2.60.40.420 111 284 2.6E-42 T 01-11-2018 IPR008972 Cupredoxin DOE78_14960 30b92a6f98a0f70d690702c288da6883 318 SUPERFAMILY SSF49503 120 269 2.07E-40 T 01-11-2018 IPR008972 Cupredoxin DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 SUPERFAMILY SSF47384 428 506 3.53E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 SMART SM00387 556 696 1.8E-31 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 Gene3D G3DSA:1.10.287.130 398 505 1.1E-18 T 01-11-2018 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 Pfam PF07695 7TM diverse intracellular signalling 193 396 3.0E-50 T 01-11-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 Pfam PF00512 His Kinase A (phospho-acceptor) domain 442 506 5.3E-14 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 Gene3D G3DSA:2.60.40.2380 45 188 5.8E-24 T 01-11-2018 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 Pfam PF07696 7TMR-DISM extracellular 2 49 181 3.0E-30 T 01-11-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 693 4.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 4.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 4.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 674 4.9E-14 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 SMART SM00388 442 507 3.5E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 SUPERFAMILY SSF55874 497 695 2.1E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 Gene3D G3DSA:3.30.565.10 513 698 5.4E-38 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03750 d17cf939d37ee9e3ab9c70b7bf51856a 703 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 693 4.3E-22 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_15350 2c1e6fcb2557a2d8205131dbfc4cf482 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 47.87 T 01-11-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DOE78_15350 2c1e6fcb2557a2d8205131dbfc4cf482 233 Pfam PF01048 Phosphorylase superfamily 16 217 7.3E-39 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DOE78_15350 2c1e6fcb2557a2d8205131dbfc4cf482 233 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 01-11-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_15350 2c1e6fcb2557a2d8205131dbfc4cf482 233 Gene3D G3DSA:3.40.50.1580 1 233 8.4E-71 T 01-11-2018 DOE78_15350 2c1e6fcb2557a2d8205131dbfc4cf482 233 SUPERFAMILY SSF53167 2 232 6.41E-91 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DOE78_15350 2c1e6fcb2557a2d8205131dbfc4cf482 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 8.0E-109 T 01-11-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DOE78_16115 c179a6339c331284df332409d7c20529 492 PIRSF PIRSF007466 1 492 4.0E-268 T 01-11-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 DOE78_16115 c179a6339c331284df332409d7c20529 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 1.1E-226 T 01-11-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 DOE78_16115 c179a6339c331284df332409d7c20529 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 3.2E-266 T 01-11-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 DOE78_16115 c179a6339c331284df332409d7c20529 492 SUPERFAMILY SSF52540 19 235 5.22E-15 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16115 c179a6339c331284df332409d7c20529 492 Gene3D G3DSA:3.40.50.300 12 236 6.2E-11 T 01-11-2018 DOE78_22590 fe0474288669feabfc20786862cf8296 94 Gene3D G3DSA:3.40.50.2300 3 94 2.2E-27 T 01-11-2018 DOE78_22590 fe0474288669feabfc20786862cf8296 94 SUPERFAMILY SSF52794 1 92 2.07E-17 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_22590 fe0474288669feabfc20786862cf8296 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 87 5.6E-12 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 SUPERFAMILY SSF52540 4 226 1.36E-54 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 Gene3D G3DSA:3.40.50.300 248 505 7.5E-41 T 01-11-2018 DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 Gene3D G3DSA:3.40.50.300 1 241 6.5E-55 T 01-11-2018 DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 SMART SM00382 30 220 7.4E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 SMART SM00382 289 485 5.7E-5 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 Pfam PF00005 ABC transporter 280 436 1.9E-17 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 Pfam PF00005 ABC transporter 21 172 1.1E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04165 b1b4c3ff10fbc4d9c1bd883fc9dc87c0 506 SUPERFAMILY SSF52540 258 495 5.63E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23530 482eb643f3c80c1b8c36ff631f3b486b 275 Pfam PF00460 Flagella basal body rod protein 7 35 2.0E-10 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DOE78_23530 482eb643f3c80c1b8c36ff631f3b486b 275 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 146 1.3E-23 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE78_23530 482eb643f3c80c1b8c36ff631f3b486b 275 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 01-11-2018 IPR019776 Flagellar basal body rod protein, conserved site DOE78_23530 482eb643f3c80c1b8c36ff631f3b486b 275 SUPERFAMILY SSF117143 113 236 1.96E-9 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE78_23530 482eb643f3c80c1b8c36ff631f3b486b 275 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 195 272 1.1E-16 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE78_14170 47a8d3e1eb4da53f0648519d48330ff5 283 Gene3D G3DSA:3.20.20.150 1 273 1.7E-44 T 01-11-2018 DOE78_14170 47a8d3e1eb4da53f0648519d48330ff5 283 Pfam PF01261 Xylose isomerase-like TIM barrel 22 220 5.9E-12 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_14170 47a8d3e1eb4da53f0648519d48330ff5 283 SUPERFAMILY SSF51658 1 267 4.84E-54 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_06770 277d0da7cce08199ce538c3758d56613 170 Pfam PF13563 2'-5' RNA ligase superfamily 14 152 6.4E-25 T 01-11-2018 DOE78_06770 277d0da7cce08199ce538c3758d56613 170 Hamap MF_01444 Putative phosphoesterase . 1 168 39.05 T 01-11-2018 IPR022932 Putative phosphoesterase YjcG DOE78_06770 277d0da7cce08199ce538c3758d56613 170 Gene3D G3DSA:3.90.1140.10 1 170 2.9E-42 T 01-11-2018 DOE78_06770 277d0da7cce08199ce538c3758d56613 170 SUPERFAMILY SSF55144 1 168 6.8E-33 T 01-11-2018 IPR009097 Cyclic phosphodiesterase DOE78_23000 0cffef0758b815c1d221d42ca85877f2 369 SUPERFAMILY SSF53756 22 368 1.08E-50 T 01-11-2018 DOE78_23000 0cffef0758b815c1d221d42ca85877f2 369 Gene3D G3DSA:3.40.50.2000 1 191 2.0E-10 T 01-11-2018 DOE78_23000 0cffef0758b815c1d221d42ca85877f2 369 Gene3D G3DSA:3.40.50.2000 192 359 1.7E-29 T 01-11-2018 DOE78_23000 0cffef0758b815c1d221d42ca85877f2 369 Pfam PF00534 Glycosyl transferases group 1 182 347 1.5E-19 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23000 0cffef0758b815c1d221d42ca85877f2 369 Pfam PF13439 Glycosyltransferase Family 4 22 170 5.6E-11 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_04545 ac8ac54dd83776d972d374fd3200ac7b 550 Pfam PF12793 Sugar transport-related sRNA regulator N-term 8 93 2.4E-10 T 01-11-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DOE78_04545 ac8ac54dd83776d972d374fd3200ac7b 550 Gene3D G3DSA:3.40.190.10 125 347 6.1E-24 T 01-11-2018 DOE78_04545 ac8ac54dd83776d972d374fd3200ac7b 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 163 301 1.7E-15 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_04545 ac8ac54dd83776d972d374fd3200ac7b 550 SUPERFAMILY SSF53850 120 546 1.63E-43 T 01-11-2018 DOE78_21100 c4a8da288ac5f5dc85105fbc900cabfd 365 TIGRFAM TIGR00277 HDIG: HDIG domain 133 226 1.3E-8 T 01-11-2018 IPR006675 HDIG domain DOE78_21100 c4a8da288ac5f5dc85105fbc900cabfd 365 SUPERFAMILY SSF109604 122 295 1.26E-38 T 01-11-2018 DOE78_21100 c4a8da288ac5f5dc85105fbc900cabfd 365 Gene3D G3DSA:1.10.3210.10 5 298 4.8E-78 T 01-11-2018 DOE78_21100 c4a8da288ac5f5dc85105fbc900cabfd 365 SMART SM00471 131 267 1.7E-10 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_21100 c4a8da288ac5f5dc85105fbc900cabfd 365 Pfam PF13487 HD domain 186 249 5.6E-19 T 01-11-2018 DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 SUPERFAMILY SSF47090 541 610 1.46E-18 T 01-11-2018 IPR036365 PGBD-like superfamily DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 SUPERFAMILY SSF47090 630 696 3.92E-17 T 01-11-2018 IPR036365 PGBD-like superfamily DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Gene3D G3DSA:3.20.20.80 115 405 8.6E-103 T 01-11-2018 DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Gene3D G3DSA:3.10.350.10 438 490 1.9E-18 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 SUPERFAMILY SSF54106 440 484 8.89E-12 T 01-11-2018 DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 SUPERFAMILY SSF51445 98 407 3.51E-47 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 SMART SM00636 98 400 2.9E-25 T 01-11-2018 IPR011583 Chitinase II GO:0008061 DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 SMART SM00257 442 485 1.5E-16 T 01-11-2018 IPR018392 LysM domain DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Gene3D G3DSA:1.10.101.10 538 613 3.5E-20 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Gene3D G3DSA:1.10.101.10 624 700 7.8E-19 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Pfam PF01471 Putative peptidoglycan binding domain 640 695 4.0E-14 T 01-11-2018 IPR002477 Peptidoglycan binding-like DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Pfam PF01471 Putative peptidoglycan binding domain 552 608 1.2E-14 T 01-11-2018 IPR002477 Peptidoglycan binding-like DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Pfam PF00704 Glycosyl hydrolases family 18 98 399 2.0E-34 T 01-11-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Pfam PF01476 LysM domain 443 484 6.3E-13 T 01-11-2018 IPR018392 LysM domain DOE78_13055 f1dbd107be3acea07d6dd8848bf915fc 700 Gene3D G3DSA:3.10.50.10 302 371 8.6E-103 T 01-11-2018 IPR029070 Chitinase insertion domain superfamily DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 Gene3D G3DSA:3.40.50.300 107 308 1.0E-116 T 01-11-2018 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 SUPERFAMILY SSF47364 18 95 2.36E-21 T 01-11-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 Pfam PF02881 SRP54-type protein, helical bundle domain 33 99 2.2E-14 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 293 306 - T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 46 320 65.44 T 01-11-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 SMART SM00382 118 296 2.1E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 Gene3D G3DSA:1.20.120.140 20 317 1.0E-116 T 01-11-2018 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 Pfam PF00448 SRP54-type protein, GTPase domain 120 319 1.7E-83 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 SUPERFAMILY SSF52540 120 318 5.4E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 SMART SM00963 22 103 1.2E-25 T 01-11-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 SMART SM00962 119 320 6.5E-125 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08035 74b29e175b83ccc0cab8125f82ac312e 327 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 319 3.4E-118 T 01-11-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DOE78_23870 21a40727bbebadce76a5107254179680 283 Gene3D G3DSA:3.40.50.720 1 188 1.7E-73 T 01-11-2018 DOE78_23870 21a40727bbebadce76a5107254179680 283 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 01-11-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DOE78_23870 21a40727bbebadce76a5107254179680 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 1.6E-36 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DOE78_23870 21a40727bbebadce76a5107254179680 283 SUPERFAMILY SSF51735 1 185 2.55E-63 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_23870 21a40727bbebadce76a5107254179680 283 SUPERFAMILY SSF48179 185 283 2.13E-34 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_23870 21a40727bbebadce76a5107254179680 283 Gene3D G3DSA:1.10.1040.10 193 278 1.1E-36 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_23870 21a40727bbebadce76a5107254179680 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 1.7E-68 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DOE78_23870 21a40727bbebadce76a5107254179680 283 PIRSF PIRSF000105 1 283 1.7E-94 T 01-11-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 DOE78_06775 44305e65a8fc65687908b07666a3b475 240 SUPERFAMILY SSF53474 3 237 1.76E-33 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06775 44305e65a8fc65687908b07666a3b475 240 Pfam PF00756 Putative esterase 13 234 5.5E-44 T 01-11-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DOE78_06775 44305e65a8fc65687908b07666a3b475 240 Gene3D G3DSA:3.40.50.1820 1 239 4.7E-43 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_15275 6b4896814c0b55ddccdf212d1b28681e 438 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 27 409 1.6E-115 T 01-11-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DOE78_15275 6b4896814c0b55ddccdf212d1b28681e 438 Pfam PF02386 Cation transport protein 16 424 2.7E-57 T 01-11-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 Gene3D G3DSA:1.20.140.10 238 381 6.5E-47 T 01-11-2018 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 SUPERFAMILY SSF56645 5 245 1.06E-81 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 01-11-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 Gene3D G3DSA:1.10.540.10 1 121 3.7E-33 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 1.4E-46 T 01-11-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 SUPERFAMILY SSF47203 230 380 4.35E-48 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 219 4.0E-27 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 7.4E-31 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DOE78_09870 aa549ab052036702830d2c6951e2073d 382 Gene3D G3DSA:2.40.110.10 122 237 7.8E-46 T 01-11-2018 DOE78_22970 672b0a739d285c46bebe85fde2023ce7 380 Pfam PF07730 Histidine kinase 180 248 4.3E-15 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_22970 672b0a739d285c46bebe85fde2023ce7 380 Pfam PF05384 Sensor protein DegS 12 170 2.6E-60 T 01-11-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 DOE78_22970 672b0a739d285c46bebe85fde2023ce7 380 Gene3D G3DSA:3.30.565.10 246 380 8.2E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_22970 672b0a739d285c46bebe85fde2023ce7 380 SUPERFAMILY SSF55874 256 378 9.69E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_22970 672b0a739d285c46bebe85fde2023ce7 380 SMART SM00387 287 380 1.5E-10 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_22970 672b0a739d285c46bebe85fde2023ce7 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 379 7.4E-12 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_22970 672b0a739d285c46bebe85fde2023ce7 380 PIRSF PIRSF003169 1 380 2.4E-158 T 01-11-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 Gene3D G3DSA:1.10.3730.40 181 336 9.0E-70 T 01-11-2018 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 176 9.2E-75 T 01-11-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 Gene3D G3DSA:3.40.50.720 1 180 1.2E-76 T 01-11-2018 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 327 43.719 T 01-11-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 182 324 1.4E-66 T 01-11-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 PIRSF PIRSF000116 201 332 3.8E-14 T 01-11-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 PIRSF PIRSF000116 1 205 2.4E-40 T 01-11-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 SUPERFAMILY SSF51735 3 181 9.51E-70 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 325 4.7E-140 T 01-11-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DOE78_18120 806b5037ecf252f3a266c6132d45f39c 340 SUPERFAMILY SSF48179 182 331 4.76E-72 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 Gene3D G3DSA:3.40.50.1000 4 279 4.0E-84 T 01-11-2018 IPR023214 HAD superfamily DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 282 3.7E-59 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 282 1.9E-61 T 01-11-2018 DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 Gene3D G3DSA:3.30.1240.10 84 211 4.0E-84 T 01-11-2018 DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 01-11-2018 DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 255 1.8E-27 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 ProSitePatterns PS01229 Hypothetical cof family signature 2. 236 258 - T 01-11-2018 DOE78_06160 b35b007aa3a78798b9c6ad2f5062fea6 288 SUPERFAMILY SSF56784 1 286 3.61E-63 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_23525 4a9c290e19318ba83f805a4d7349928d 94 ProDom PD053619 EPUA PRECURSOR SIGNAL PEPTIDE YFDG EXTRACELLULAR OB2955 BH3736 GBS0884 SMU.1524C 57 88 3.0E-6 T 01-11-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA DOE78_23525 4a9c290e19318ba83f805a4d7349928d 94 Pfam PF11772 DNA-directed RNA polymerase subunit beta 47 90 5.6E-19 T 01-11-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA DOE78_00730 205c3edcfabcdfade1c79b23ecfad6db 207 Gene3D G3DSA:3.40.1370.10 3 207 4.0E-83 T 01-11-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00730 205c3edcfabcdfade1c79b23ecfad6db 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 1.5E-73 T 01-11-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DOE78_00730 205c3edcfabcdfade1c79b23ecfad6db 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.3E-82 T 01-11-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00730 205c3edcfabcdfade1c79b23ecfad6db 207 SUPERFAMILY SSF52166 1 206 9.94E-86 T 01-11-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DOE78_00730 205c3edcfabcdfade1c79b23ecfad6db 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 37.775 T 01-11-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_15450 70936c9f60011821e7e02e6d653e5ecc 324 Gene3D G3DSA:3.40.50.10740 1 158 7.9E-61 T 01-11-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DOE78_15450 70936c9f60011821e7e02e6d653e5ecc 324 SUPERFAMILY SSF52317 1 166 1.56E-47 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_15450 70936c9f60011821e7e02e6d653e5ecc 324 SUPERFAMILY SSF141986 165 316 2.35E-34 T 01-11-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DOE78_15450 70936c9f60011821e7e02e6d653e5ecc 324 Gene3D G3DSA:3.50.30.60 159 321 5.2E-53 T 01-11-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DOE78_15450 70936c9f60011821e7e02e6d653e5ecc 324 Pfam PF02016 LD-carboxypeptidase 12 311 6.6E-75 T 01-11-2018 IPR003507 Peptidase family S66 DOE78_15450 70936c9f60011821e7e02e6d653e5ecc 324 PIRSF PIRSF028757 1 324 3.7E-84 T 01-11-2018 IPR003507 Peptidase family S66 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 SUPERFAMILY SSF56235 22 439 5.89E-154 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Pfam PF04898 Glutamate synthase central domain 461 736 3.9E-117 T 01-11-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Pfam PF01645 Conserved region in glutamate synthase 795 1162 7.2E-158 T 01-11-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Gene3D G3DSA:3.20.20.70 487 1178 0.0 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Pfam PF01493 GXGXG motif 1240 1428 8.0E-81 T 01-11-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 SUPERFAMILY SSF51395 455 1199 2.56E-262 T 01-11-2018 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Gene3D G3DSA:3.60.20.10 22 549 0.0 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Gene3D G3DSA:2.160.20.60 1211 1484 8.0E-109 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 SUPERFAMILY SSF69336 1209 1475 1.31E-92 T 01-11-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Gene3D G3DSA:3.20.20.70 441 793 0.0 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12255 48589c03d95da6e5b3645efdccd6a577 1513 Pfam PF00310 Glutamine amidotransferases class-II 22 436 8.9E-187 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain DOE78_03610 ae712f06c371d28dfb8592edabdd326a 582 SUPERFAMILY SSF55874 438 569 5.27E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03610 ae712f06c371d28dfb8592edabdd326a 582 Gene3D G3DSA:3.30.565.10 436 578 3.8E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03610 ae712f06c371d28dfb8592edabdd326a 582 Pfam PF06580 Histidine kinase 382 460 7.4E-24 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_03610 ae712f06c371d28dfb8592edabdd326a 582 Pfam PF02743 Cache domain 61 280 7.9E-13 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_03610 ae712f06c371d28dfb8592edabdd326a 582 Gene3D G3DSA:3.30.450.20 185 296 4.3E-8 T 01-11-2018 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 212 289 7.2E-33 T 01-11-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 46 194 3.6E-28 T 01-11-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 34 293 2.7E-68 T 01-11-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 SUPERFAMILY SSF56770 35 290 8.9E-76 T 01-11-2018 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 PIRSF PIRSF000310 10 300 1.1E-94 T 01-11-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 Gene3D G3DSA:4.10.480.10 212 293 1.8E-31 T 01-11-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 217 235 1.0E-27 T 01-11-2018 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 145 169 1.0E-27 T 01-11-2018 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 174 197 1.0E-27 T 01-11-2018 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 199 216 1.0E-27 T 01-11-2018 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 54 78 1.0E-27 T 01-11-2018 DOE78_16615 82c43da953761543dbaa9aaab0efcc6b 301 Gene3D G3DSA:3.40.50.700 32 211 5.4E-53 T 01-11-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 SUPERFAMILY SSF51735 2 164 4.67E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 285 1.5E-18 T 01-11-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 SUPERFAMILY SSF48179 169 287 1.81E-26 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 Gene3D G3DSA:1.10.1040.10 163 289 3.1E-33 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 1.5E-39 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 PIRSF PIRSF000103 1 289 7.9E-80 T 01-11-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 Gene3D G3DSA:3.40.50.720 1 162 3.3E-48 T 01-11-2018 DOE78_10475 eee47695c34bc6d27b427f0d0f0bafc2 289 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 01-11-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DOE78_03745 e8245fb702628e4334784a1e344d3d7f 309 SUPERFAMILY SSF53807 40 302 2.88E-50 T 01-11-2018 DOE78_03745 e8245fb702628e4334784a1e344d3d7f 309 Pfam PF01497 Periplasmic binding protein 71 283 5.2E-30 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain DOE78_03745 e8245fb702628e4334784a1e344d3d7f 309 Gene3D G3DSA:3.40.50.1980 141 308 3.9E-57 T 01-11-2018 DOE78_03745 e8245fb702628e4334784a1e344d3d7f 309 Gene3D G3DSA:3.40.50.1980 52 140 2.9E-24 T 01-11-2018 DOE78_14335 26f828aa82fa7629f9a1fd12de241e9a 239 Gene3D G3DSA:3.40.30.10 1 209 4.6E-77 T 01-11-2018 DOE78_14335 26f828aa82fa7629f9a1fd12de241e9a 239 SUPERFAMILY SSF52833 1 211 6.28E-48 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_14335 26f828aa82fa7629f9a1fd12de241e9a 239 Pfam PF01323 DSBA-like thioredoxin domain 2 205 1.7E-47 T 01-11-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DOE78_14535 58f77c3e1299ab3e75daea373fb5928e 363 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 3 228 3.1E-45 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DOE78_14535 58f77c3e1299ab3e75daea373fb5928e 363 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 34 45 7.4E-9 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_14535 58f77c3e1299ab3e75daea373fb5928e 363 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 82 99 7.4E-9 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_14535 58f77c3e1299ab3e75daea373fb5928e 363 SUPERFAMILY SSF56601 10 249 2.38E-54 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_14535 58f77c3e1299ab3e75daea373fb5928e 363 Gene3D G3DSA:3.40.710.10 1 272 2.9E-77 T 01-11-2018 DOE78_12430 65b4ba81af918a70bd46eab30a494b05 343 SUPERFAMILY SSF51395 1 333 2.28E-106 T 01-11-2018 DOE78_12430 65b4ba81af918a70bd46eab30a494b05 343 Gene3D G3DSA:3.20.20.70 1 339 4.8E-116 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12430 65b4ba81af918a70bd46eab30a494b05 343 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 323 1.3E-72 T 01-11-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DOE78_03140 2a7d7d034d74f523fba7646406307cff 242 Pfam PF06738 Putative threonine/serine exporter 3 241 3.0E-79 T 01-11-2018 IPR010619 Putative threonine/serine exporter DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 SUPERFAMILY SSF52317 290 531 1.46E-84 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 Pfam PF00117 Glutamine amidotransferase class-I 302 527 1.6E-58 T 01-11-2018 IPR017926 Glutamine amidotransferase DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 TIGRFAM TIGR00337 PyrG: CTP synthase 1 527 2.7E-266 T 01-11-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 Gene3D G3DSA:3.40.50.300 1 286 4.1E-135 T 01-11-2018 DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 Pfam PF06418 CTP synthase N-terminus 3 267 8.3E-131 T 01-11-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 SUPERFAMILY SSF52540 1 271 2.13E-127 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 Hamap MF_01227 CTP synthase [pyrG]. 2 532 52.911 T 01-11-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DOE78_23840 4fbb70efe52077f7b9f57fa1bb61419c 533 Gene3D G3DSA:3.40.50.880 288 533 1.5E-104 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_06035 c609353531b45f6def3fbb3e5fb6d89f 469 SUPERFAMILY SSF51905 6 465 1.11E-53 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_06035 c609353531b45f6def3fbb3e5fb6d89f 469 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 5 468 8.3E-141 T 01-11-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DOE78_06035 c609353531b45f6def3fbb3e5fb6d89f 469 Gene3D G3DSA:1.10.3110.10 110 203 3.6E-152 T 01-11-2018 DOE78_06035 c609353531b45f6def3fbb3e5fb6d89f 469 SUPERFAMILY SSF54373 308 415 3.19E-34 T 01-11-2018 DOE78_06035 c609353531b45f6def3fbb3e5fb6d89f 469 Gene3D G3DSA:3.50.50.60 9 456 3.6E-152 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_06035 c609353531b45f6def3fbb3e5fb6d89f 469 Gene3D G3DSA:3.90.660.20 44 414 3.6E-152 T 01-11-2018 DOE78_06035 c609353531b45f6def3fbb3e5fb6d89f 469 Pfam PF01593 Flavin containing amine oxidoreductase 15 464 2.3E-66 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 Pfam PF13424 Tetratricopeptide repeat 770 822 1.8E-7 T 01-11-2018 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SMART SM00028 558 591 13.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SMART SM00028 602 635 16.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SMART SM00028 517 550 150.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SMART SM00028 795 828 0.004 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SMART SM00028 702 739 150.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SMART SM00028 843 876 1.3 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SUPERFAMILY SSF48452 477 593 1.75E-9 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 Gene3D G3DSA:1.25.40.10 772 901 2.7E-16 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SUPERFAMILY SSF52540 19 335 6.8E-6 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 Gene3D G3DSA:1.25.40.10 668 771 2.6E-6 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 Gene3D G3DSA:1.25.40.10 492 667 1.7E-17 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SUPERFAMILY SSF48452 590 783 3.45E-11 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 Pfam PF13181 Tetratricopeptide repeat 563 584 0.12 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_11320 ef936f9aa494b1adbebc8ee3d8caf86e 901 SUPERFAMILY SSF48452 719 851 1.84E-14 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_10325 1f06e13eda8cd87da2b18c1508a00fd9 322 SUPERFAMILY SSF53613 1 319 2.03E-82 T 01-11-2018 IPR029056 Ribokinase-like DOE78_10325 1f06e13eda8cd87da2b18c1508a00fd9 322 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_10325 1f06e13eda8cd87da2b18c1508a00fd9 322 Pfam PF00294 pfkB family carbohydrate kinase 1 312 7.9E-74 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_10325 1f06e13eda8cd87da2b18c1508a00fd9 322 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 34 58 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_10325 1f06e13eda8cd87da2b18c1508a00fd9 322 Gene3D G3DSA:3.40.1190.20 2 322 5.5E-100 T 01-11-2018 IPR029056 Ribokinase-like DOE78_04350 be0b2780b48b573ec0725bbb46a2d950 231 SUPERFAMILY SSF53639 1 222 9.42E-74 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_04350 be0b2780b48b573ec0725bbb46a2d950 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 230 8.2E-124 T 01-11-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 DOE78_04350 be0b2780b48b573ec0725bbb46a2d950 231 Gene3D G3DSA:3.40.225.10 1 230 2.6E-64 T 01-11-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DOE78_04350 be0b2780b48b573ec0725bbb46a2d950 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 197 2.3E-49 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_04350 be0b2780b48b573ec0725bbb46a2d950 231 SMART SM01007 7 197 8.0E-71 T 01-11-2018 IPR001303 Class II aldolase/adducin N-terminal DOE78_01485 9064e6be82cb34eb952ea2f6b89e13aa 235 Gene3D G3DSA:3.30.420.40 3 217 2.7E-52 T 01-11-2018 DOE78_01485 9064e6be82cb34eb952ea2f6b89e13aa 235 Gene3D G3DSA:3.30.420.40 95 190 2.7E-52 T 01-11-2018 DOE78_01485 9064e6be82cb34eb952ea2f6b89e13aa 235 SUPERFAMILY SSF53067 1 102 4.27E-28 T 01-11-2018 DOE78_01485 9064e6be82cb34eb952ea2f6b89e13aa 235 Pfam PF00814 Glycoprotease family 32 172 5.5E-34 T 01-11-2018 IPR000905 Gcp-like domain DOE78_01485 9064e6be82cb34eb952ea2f6b89e13aa 235 SUPERFAMILY SSF53067 109 215 1.62E-17 T 01-11-2018 DOE78_01485 9064e6be82cb34eb952ea2f6b89e13aa 235 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 217 1.8E-54 T 01-11-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DOE78_08535 b3d9ba395bc9363d7b7928d1414bcc0a 262 PIRSF PIRSF021288 1 262 3.6E-147 T 01-11-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain DOE78_08535 b3d9ba395bc9363d7b7928d1414bcc0a 262 SUPERFAMILY SSF55021 5 75 5.0E-9 T 01-11-2018 DOE78_08535 b3d9ba395bc9363d7b7928d1414bcc0a 262 Pfam PF11868 Protein of unknown function (DUF3388) 72 260 1.8E-107 T 01-11-2018 IPR024514 Domain of unknown function DUF3388 DOE78_14000 6f495beb6139d4eb2e7f9faaebc8c303 151 Gene3D G3DSA:1.10.10.10 1 145 9.0E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14000 6f495beb6139d4eb2e7f9faaebc8c303 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.1E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14000 6f495beb6139d4eb2e7f9faaebc8c303 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.1E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14000 6f495beb6139d4eb2e7f9faaebc8c303 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.1E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14000 6f495beb6139d4eb2e7f9faaebc8c303 151 Pfam PF01047 MarR family 35 91 3.1E-15 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14000 6f495beb6139d4eb2e7f9faaebc8c303 151 SMART SM00347 28 128 8.8E-21 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_14000 6f495beb6139d4eb2e7f9faaebc8c303 151 SUPERFAMILY SSF46785 14 145 4.56E-31 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_16990 0faf0a1e84e0b2459d7331e873105181 583 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 1 510 1.9E-134 T 01-11-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DOE78_16990 0faf0a1e84e0b2459d7331e873105181 583 Pfam PF02867 Ribonucleotide reductase, barrel domain 1 500 2.1E-98 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_16990 0faf0a1e84e0b2459d7331e873105181 583 SUPERFAMILY SSF51998 1 512 6.41E-107 T 01-11-2018 DOE78_16990 0faf0a1e84e0b2459d7331e873105181 583 PRINTS PR01183 Ribonucleotide reductase large chain signature 241 264 1.4E-30 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_16990 0faf0a1e84e0b2459d7331e873105181 583 PRINTS PR01183 Ribonucleotide reductase large chain signature 307 330 1.4E-30 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_16990 0faf0a1e84e0b2459d7331e873105181 583 PRINTS PR01183 Ribonucleotide reductase large chain signature 372 399 1.4E-30 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_16990 0faf0a1e84e0b2459d7331e873105181 583 PRINTS PR01183 Ribonucleotide reductase large chain signature 279 301 1.4E-30 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_13750 8b505be06b0bc94f5fcfa380eacf41d9 96 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 46 89 6.6E-6 T 01-11-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DOE78_13750 8b505be06b0bc94f5fcfa380eacf41d9 96 SUPERFAMILY SSF47789 42 95 7.32E-11 T 01-11-2018 DOE78_13750 8b505be06b0bc94f5fcfa380eacf41d9 96 Gene3D G3DSA:1.10.150.20 39 96 1.1E-12 T 01-11-2018 DOE78_09550 05a3bbb02a4b4306125d2eef7755f260 335 SUPERFAMILY SSF81345 5 334 4.32E-77 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_09550 05a3bbb02a4b4306125d2eef7755f260 335 Pfam PF01032 FecCD transport family 21 334 2.4E-86 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_09550 05a3bbb02a4b4306125d2eef7755f260 335 Gene3D G3DSA:1.10.3470.10 7 335 3.3E-90 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_06780 1ad36c359c6491cacc729efdcd0f6df2 333 Gene3D G3DSA:3.40.190.10 49 329 6.0E-99 T 01-11-2018 DOE78_06780 1ad36c359c6491cacc729efdcd0f6df2 333 Pfam PF16868 NMT1-like family 49 329 2.4E-88 T 01-11-2018 IPR011852 TRAP transporter solute receptor, TAXI family DOE78_06780 1ad36c359c6491cacc729efdcd0f6df2 333 Gene3D G3DSA:3.40.190.10 132 268 6.0E-99 T 01-11-2018 DOE78_06780 1ad36c359c6491cacc729efdcd0f6df2 333 SUPERFAMILY SSF53850 43 330 4.3E-77 T 01-11-2018 DOE78_06780 1ad36c359c6491cacc729efdcd0f6df2 333 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 329 1.1E-108 T 01-11-2018 IPR011852 TRAP transporter solute receptor, TAXI family DOE78_17640 b660aa555e4d0a42f7c60eaf78726c8e 219 Pfam PF07423 Protein of unknown function (DUF1510) 8 215 6.3E-67 T 01-11-2018 IPR009988 Protein of unknown function DUF1510 DOE78_17640 b660aa555e4d0a42f7c60eaf78726c8e 219 Pfam PF12685 SpoIIIAH-like protein 28 113 2.6E-7 T 01-11-2018 IPR024232 Stage III sporulation protein AH-like DOE78_03770 d473b72ff203294a2c6d40d92ed854b4 317 Gene3D G3DSA:3.40.50.720 4 297 1.6E-93 T 01-11-2018 DOE78_03770 d473b72ff203294a2c6d40d92ed854b4 317 SUPERFAMILY SSF51735 1 314 1.02E-86 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_03770 d473b72ff203294a2c6d40d92ed854b4 317 Gene3D G3DSA:3.90.25.10 178 306 1.6E-93 T 01-11-2018 DOE78_03770 d473b72ff203294a2c6d40d92ed854b4 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 243 3.3E-54 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 SUPERFAMILY SSF52540 271 485 3.74E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 SUPERFAMILY SSF52540 5 225 1.22E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 Pfam PF00005 ABC transporter 273 426 7.3E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 Gene3D G3DSA:3.40.50.300 251 495 2.1E-44 T 01-11-2018 DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 Gene3D G3DSA:3.40.50.300 1 241 5.3E-61 T 01-11-2018 DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 Pfam PF00005 ABC transporter 22 173 2.7E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 SMART SM00382 31 220 2.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_22770 3d9f2de3dc19d7cd7d3463a665bad99f 498 SMART SM00382 281 475 1.5E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18225 4805541101d33439f623a6023fe71fa5 169 SUPERFAMILY SSF111126 36 147 1.2E-24 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily DOE78_18225 4805541101d33439f623a6023fe71fa5 169 Pfam PF10702 Protein of unknown function (DUF2507) 39 160 4.4E-49 T 01-11-2018 IPR019642 Protein of unknown function DUF2507 DOE78_18225 4805541101d33439f623a6023fe71fa5 169 Gene3D G3DSA:3.30.1380.20 16 168 5.8E-58 T 01-11-2018 DOE78_10495 1def1bbdb66853c91ae45dd5f7f5a452 202 Pfam PF01810 LysE type translocator 15 198 2.9E-22 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_13170 1d6a6cbb7af8229b64ff4abfebb0fd1c 64 SMART SM00914 24 60 3.1E-7 T 01-11-2018 IPR014957 IDEAL domain DOE78_13170 1d6a6cbb7af8229b64ff4abfebb0fd1c 64 Gene3D G3DSA:4.10.810.10 11 64 1.1E-15 T 01-11-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 DOE78_13170 1d6a6cbb7af8229b64ff4abfebb0fd1c 64 Pfam PF08858 IDEAL domain 24 60 3.0E-12 T 01-11-2018 IPR014957 IDEAL domain DOE78_21540 55a21fd1b98972946bed94a45d2c48aa 251 Gene3D G3DSA:3.40.50.10490 77 247 2.4E-30 T 01-11-2018 DOE78_21540 55a21fd1b98972946bed94a45d2c48aa 251 SUPERFAMILY SSF53697 83 230 1.83E-31 T 01-11-2018 DOE78_21540 55a21fd1b98972946bed94a45d2c48aa 251 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 67 1.9E-14 T 01-11-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DOE78_21540 55a21fd1b98972946bed94a45d2c48aa 251 Pfam PF01380 SIS domain 108 225 2.8E-14 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_21540 55a21fd1b98972946bed94a45d2c48aa 251 Gene3D G3DSA:1.10.10.10 3 73 3.6E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_21540 55a21fd1b98972946bed94a45d2c48aa 251 SUPERFAMILY SSF46689 5 72 6.45E-19 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SMART SM00322 553 618 4.3E-14 T 01-11-2018 IPR004087 K Homology domain GO:0003676 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Gene3D G3DSA:3.30.230.70 235 550 1.4E-119 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Gene3D G3DSA:3.30.1370.10 551 622 6.7E-21 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SUPERFAMILY SSF50249 621 703 6.65E-20 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SUPERFAMILY SSF55666 451 547 4.58E-28 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Pfam PF00013 KH domain 557 615 7.2E-10 T 01-11-2018 IPR004088 K Homology domain, type 1 GO:0003723 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Gene3D G3DSA:3.30.230.70 1 230 2.9E-87 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Pfam PF00575 S1 RNA binding domain 620 691 2.6E-18 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 9.2E-17 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Pfam PF03725 3' exoribonuclease family, domain 2 460 530 2.0E-7 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 321 5.3E-16 T 01-11-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SUPERFAMILY SSF55666 145 235 4.58E-31 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SUPERFAMILY SSF54211 8 144 1.42E-49 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 PIRSF PIRSF005499 2 706 1.2E-304 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Gene3D G3DSA:2.40.50.140 623 694 1.0E-25 T 01-11-2018 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SUPERFAMILY SSF54791 556 641 2.88E-24 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 31.175 T 01-11-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SUPERFAMILY SSF54211 292 489 2.18E-48 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Pfam PF01138 3' exoribonuclease family, domain 1 324 457 8.0E-17 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 5.1E-21 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_08420 8473adecd5a140c35d954f67f3e80072 706 SMART SM00316 621 691 2.8E-24 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 SMART SM00865 207 324 6.5E-55 T 01-11-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 Pfam PF12327 FtsZ family, C-terminal domain 222 315 7.6E-33 T 01-11-2018 IPR024757 Cell division protein FtsZ, C-terminal DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 Gene3D G3DSA:3.30.1330.20 221 327 3.9E-42 T 01-11-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 01-11-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 7.4E-45 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 SUPERFAMILY SSF55307 204 318 3.89E-44 T 01-11-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 SUPERFAMILY SSF52490 12 208 6.02E-73 T 01-11-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 322 3.1E-141 T 01-11-2018 IPR000158 Cell division protein FtsZ GO:0005525 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 01-11-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 PRINTS PR00423 Cell division protein FtsZ signature 126 147 8.5E-53 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 PRINTS PR00423 Cell division protein FtsZ signature 189 211 8.5E-53 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 PRINTS PR00423 Cell division protein FtsZ signature 98 118 8.5E-53 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 PRINTS PR00423 Cell division protein FtsZ signature 212 233 8.5E-53 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 Gene3D G3DSA:3.40.50.1440 5 220 1.7E-84 T 01-11-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 SMART SM00864 13 205 1.6E-117 T 01-11-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DOE78_07755 bfe5f2086c814112395d10749bd0a9f5 381 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 364 39.64 T 01-11-2018 IPR000158 Cell division protein FtsZ GO:0005525 DOE78_03230 24e58a03afe149ba8df2871dbf1b7270 345 SMART SM00387 246 339 5.1E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03230 24e58a03afe149ba8df2871dbf1b7270 345 Pfam PF07730 Histidine kinase 142 209 1.7E-16 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_03230 24e58a03afe149ba8df2871dbf1b7270 345 PIRSF PIRSF037431 2 345 7.1E-128 T 01-11-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 DOE78_03230 24e58a03afe149ba8df2871dbf1b7270 345 Gene3D G3DSA:3.30.565.10 209 341 7.4E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03230 24e58a03afe149ba8df2871dbf1b7270 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 337 5.9E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03230 24e58a03afe149ba8df2871dbf1b7270 345 SUPERFAMILY SSF55874 217 337 2.49E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_22625 80b24374dcda9da5566dfddb0d1892e0 254 PIRSF PIRSF017388 6 248 1.7E-62 T 01-11-2018 IPR012354 Esterase/lipase GO:0052689 DOE78_22625 80b24374dcda9da5566dfddb0d1892e0 254 Gene3D G3DSA:3.40.50.1820 1 245 9.5E-53 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_22625 80b24374dcda9da5566dfddb0d1892e0 254 Pfam PF12146 Serine aminopeptidase, S33 23 225 1.8E-21 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 DOE78_22625 80b24374dcda9da5566dfddb0d1892e0 254 SUPERFAMILY SSF53474 22 246 2.55E-32 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_16880 f1d4ee6d6ac592f387a6a675bdda0008 169 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 3 167 5.8E-51 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DOE78_16880 f1d4ee6d6ac592f387a6a675bdda0008 169 SUPERFAMILY SSF51230 90 166 2.75E-23 T 01-11-2018 IPR011053 Single hybrid motif DOE78_16880 f1d4ee6d6ac592f387a6a675bdda0008 169 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 128 141 9.8E-17 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DOE78_16880 f1d4ee6d6ac592f387a6a675bdda0008 169 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 127 9.8E-17 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DOE78_16880 f1d4ee6d6ac592f387a6a675bdda0008 169 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 109 9.8E-17 T 01-11-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DOE78_16880 f1d4ee6d6ac592f387a6a675bdda0008 169 Pfam PF00364 Biotin-requiring enzyme 93 164 4.8E-23 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_16880 f1d4ee6d6ac592f387a6a675bdda0008 169 Gene3D G3DSA:2.40.50.100 89 166 4.7E-29 T 01-11-2018 DOE78_21235 33ca9c8eab2f446c9065133c62a125d5 273 Pfam PF00005 ABC transporter 21 168 2.2E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_21235 33ca9c8eab2f446c9065133c62a125d5 273 Gene3D G3DSA:3.40.50.300 1 249 3.5E-67 T 01-11-2018 DOE78_21235 33ca9c8eab2f446c9065133c62a125d5 273 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_21235 33ca9c8eab2f446c9065133c62a125d5 273 SMART SM00382 29 226 3.4E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_21235 33ca9c8eab2f446c9065133c62a125d5 273 SUPERFAMILY SSF52540 4 231 1.7E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17470 6b2d789ca36f57dd34b61edc954ca257 248 SUPERFAMILY SSF75217 71 246 3.78E-56 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases DOE78_17470 6b2d789ca36f57dd34b61edc954ca257 248 PIRSF PIRSF015601 1 247 1.3E-66 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DOE78_17470 6b2d789ca36f57dd34b61edc954ca257 248 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 10 246 3.5E-66 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DOE78_17470 6b2d789ca36f57dd34b61edc954ca257 248 SUPERFAMILY SSF88697 2 66 1.99E-12 T 01-11-2018 IPR015947 PUA-like superfamily DOE78_17470 6b2d789ca36f57dd34b61edc954ca257 248 Gene3D G3DSA:3.40.1280.10 1 248 2.5E-89 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE78_17470 6b2d789ca36f57dd34b61edc954ca257 248 Pfam PF04452 RNA methyltransferase 15 242 8.7E-76 T 01-11-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DOE78_01395 c18ea20b9041f09ff61a955c22a037f1 153 SMART SM00731 4 151 5.1E-53 T 01-11-2018 IPR006640 SprT-like DOE78_01395 c18ea20b9041f09ff61a955c22a037f1 153 Pfam PF17283 SprT-like zinc ribbon domain 118 149 2.7E-7 T 01-11-2018 IPR035240 SprT-like, zinc ribbon domain DOE78_01395 c18ea20b9041f09ff61a955c22a037f1 153 Hamap MF_00745 Protein SprT-like. 4 151 39.636 T 01-11-2018 IPR023524 Uncharacterised protein family SprT-like DOE78_01395 c18ea20b9041f09ff61a955c22a037f1 153 Pfam PF10263 SprT-like family 7 97 9.1E-14 T 01-11-2018 IPR006640 SprT-like DOE78_11260 8ec71138548f3cdd6fe0fff36a7a0e82 192 PIRSF PIRSF016661 1 181 1.3E-48 T 01-11-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DOE78_11260 8ec71138548f3cdd6fe0fff36a7a0e82 192 Pfam PF02632 BioY family 33 171 9.1E-39 T 01-11-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DOE78_11260 8ec71138548f3cdd6fe0fff36a7a0e82 192 Gene3D G3DSA:1.10.1760.20 1 179 5.0E-52 T 01-11-2018 DOE78_05230 7173ae26aba3448481066486a1028eda 263 Pfam PF06182 ABC-2 family transporter protein 31 260 2.0E-16 T 01-11-2018 IPR010390 Protein of unknown function DUF990 DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 Gene3D G3DSA:1.10.8.60 507 579 3.8E-19 T 01-11-2018 DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 Gene3D G3DSA:3.30.450.20 201 308 1.1E-7 T 01-11-2018 DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 Gene3D G3DSA:3.40.50.300 321 506 3.5E-67 T 01-11-2018 DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 SUPERFAMILY SSF55785 204 270 7.23E-6 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 SMART SM00382 355 503 2.2E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 422 437 - T 01-11-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 SUPERFAMILY SSF52540 334 573 5.44E-67 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 359 372 - T 01-11-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 SMART SM00091 213 279 6.5E-5 T 01-11-2018 IPR000014 PAS domain DOE78_24510 89dec5593c38a5aa89dbd9cf55a99acc 676 Pfam PF00158 Sigma-54 interaction domain 335 501 1.2E-66 T 01-11-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 Pfam PF01938 TRAM domain 374 432 9.7E-9 T 01-11-2018 IPR002792 TRAM domain DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 421 4.9E-142 T 01-11-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 01-11-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 Pfam PF04055 Radical SAM superfamily 149 319 5.3E-27 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 3.9E-26 T 01-11-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 SMART SM00729 143 361 1.9E-57 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 Gene3D G3DSA:3.80.30.20 140 375 1.5E-84 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 429 1.2E-148 T 01-11-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 SUPERFAMILY SSF102114 125 363 3.92E-56 T 01-11-2018 DOE78_17465 ef7b5dd0da3845e8e54f5336a0693edc 449 Gene3D G3DSA:3.40.50.12160 3 134 5.7E-25 T 01-11-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOE78_10265 2b052d8adf0070401b26d16ce4f11071 340 SMART SM00062 42 261 0.0031 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_10265 2b052d8adf0070401b26d16ce4f11071 340 Pfam PF09084 NMT1/THI5 like 59 264 2.7E-23 T 01-11-2018 IPR015168 SsuA/THI5-like DOE78_10265 2b052d8adf0070401b26d16ce4f11071 340 Gene3D G3DSA:3.40.190.10 147 323 8.3E-26 T 01-11-2018 DOE78_10265 2b052d8adf0070401b26d16ce4f11071 340 Gene3D G3DSA:3.40.190.10 28 128 5.5E-6 T 01-11-2018 DOE78_10265 2b052d8adf0070401b26d16ce4f11071 340 SUPERFAMILY SSF53850 44 267 3.2E-29 T 01-11-2018 DOE78_24360 c1ce976ebfd364693f824e7a6819ed1b 260 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 217 230 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_24360 c1ce976ebfd364693f824e7a6819ed1b 260 Pfam PF00294 pfkB family carbohydrate kinase 13 259 3.3E-34 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_24360 c1ce976ebfd364693f824e7a6819ed1b 260 SUPERFAMILY SSF53613 1 260 2.65E-52 T 01-11-2018 IPR029056 Ribokinase-like DOE78_24360 c1ce976ebfd364693f824e7a6819ed1b 260 Gene3D G3DSA:3.40.1190.20 1 260 9.4E-46 T 01-11-2018 IPR029056 Ribokinase-like DOE78_07390 76093f1422be752acdada40876b56b61 206 Hamap MF_01851 UPF0637 protein . 5 205 38.771 T 01-11-2018 IPR009403 Protein of unknown function UPF0637 DOE78_07390 76093f1422be752acdada40876b56b61 206 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 8.4E-87 T 01-11-2018 IPR009403 Protein of unknown function UPF0637 DOE78_07390 76093f1422be752acdada40876b56b61 206 Gene3D G3DSA:3.30.930.20 2 206 1.6E-89 T 01-11-2018 DOE78_07390 76093f1422be752acdada40876b56b61 206 PIRSF PIRSF021332 1 206 1.5E-87 T 01-11-2018 IPR009403 Protein of unknown function UPF0637 DOE78_07390 76093f1422be752acdada40876b56b61 206 SUPERFAMILY SSF142913 3 206 2.2E-83 T 01-11-2018 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 Gene3D G3DSA:3.90.1150.10 27 387 1.4E-140 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 SUPERFAMILY SSF53383 5 392 6.37E-116 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 Gene3D G3DSA:3.40.640.10 64 286 1.4E-140 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 Pfam PF00155 Aminotransferase class I and II 33 386 3.2E-76 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 4.7E-17 T 01-11-2018 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 94 114 4.7E-17 T 01-11-2018 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 4.7E-17 T 01-11-2018 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 4.7E-17 T 01-11-2018 DOE78_15915 ef31750c24142ba6757256c368a7ffda 396 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 4.7E-17 T 01-11-2018 DOE78_08980 3b2970fe64a21cb6b4a4ea0af30ccd1f 485 Gene3D G3DSA:3.40.605.10 13 255 2.6E-154 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_08980 3b2970fe64a21cb6b4a4ea0af30ccd1f 485 Pfam PF00171 Aldehyde dehydrogenase family 16 474 7.5E-156 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_08980 3b2970fe64a21cb6b4a4ea0af30ccd1f 485 Gene3D G3DSA:3.40.309.10 256 436 2.6E-154 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_08980 3b2970fe64a21cb6b4a4ea0af30ccd1f 485 SUPERFAMILY SSF53720 5 480 3.27E-145 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_08980 3b2970fe64a21cb6b4a4ea0af30ccd1f 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_01775 dd199e7f5b27862cec4f84e86b89b0ff 734 Gene3D G3DSA:3.10.620.30 385 575 3.5E-21 T 01-11-2018 DOE78_01775 dd199e7f5b27862cec4f84e86b89b0ff 734 Pfam PF13559 Domain of unknown function (DUF4129) 660 726 1.9E-6 T 01-11-2018 IPR025403 Domain of unknown function DUF4129 DOE78_01775 dd199e7f5b27862cec4f84e86b89b0ff 734 SUPERFAMILY SSF54001 408 556 4.07E-38 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily DOE78_01775 dd199e7f5b27862cec4f84e86b89b0ff 734 Pfam PF01841 Transglutaminase-like superfamily 427 549 1.4E-23 T 01-11-2018 IPR002931 Transglutaminase-like DOE78_01775 dd199e7f5b27862cec4f84e86b89b0ff 734 SMART SM00460 476 551 1.1E-20 T 01-11-2018 IPR002931 Transglutaminase-like DOE78_07700 4558e9601f25828c3e817d061890e137 489 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 104 128 - T 01-11-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DOE78_07700 4558e9601f25828c3e817d061890e137 489 Gene3D G3DSA:3.40.1190.10 97 336 1.8E-91 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_07700 4558e9601f25828c3e817d061890e137 489 SUPERFAMILY SSF53244 332 485 4.19E-47 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_07700 4558e9601f25828c3e817d061890e137 489 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 483 4.1E-169 T 01-11-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DOE78_07700 4558e9601f25828c3e817d061890e137 489 SUPERFAMILY SSF63418 2 97 6.41E-25 T 01-11-2018 IPR035911 MurE/MurF, N-terminal DOE78_07700 4558e9601f25828c3e817d061890e137 489 Gene3D G3DSA:3.40.1390.10 2 96 4.4E-27 T 01-11-2018 DOE78_07700 4558e9601f25828c3e817d061890e137 489 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 483 36.498 T 01-11-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DOE78_07700 4558e9601f25828c3e817d061890e137 489 Pfam PF01225 Mur ligase family, catalytic domain 25 94 1.1E-12 T 01-11-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DOE78_07700 4558e9601f25828c3e817d061890e137 489 Gene3D G3DSA:3.90.190.20 337 489 2.3E-59 T 01-11-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DOE78_07700 4558e9601f25828c3e817d061890e137 489 Pfam PF08245 Mur ligase middle domain 106 312 7.0E-57 T 01-11-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DOE78_07700 4558e9601f25828c3e817d061890e137 489 SUPERFAMILY SSF53623 97 330 7.06E-77 T 01-11-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DOE78_07700 4558e9601f25828c3e817d061890e137 489 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 414 2.1E-23 T 01-11-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 Gene3D G3DSA:3.40.309.10 289 479 6.6E-187 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 Pfam PF00171 Aldehyde dehydrogenase family 48 509 6.1E-156 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 Gene3D G3DSA:3.40.605.10 9 508 6.6E-187 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 SUPERFAMILY SSF53720 3 510 9.16E-155 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 514 66.843 T 01-11-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 284 291 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 4 514 8.4E-253 T 01-11-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 DOE78_10435 e66e7d0bf7123fc86c804599684364f0 514 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 312 323 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DOE78_09420 cbeca7392e2868211458388b3f110eb7 302 SUPERFAMILY SSF56529 77 301 4.97E-72 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_09420 cbeca7392e2868211458388b3f110eb7 302 Gene3D G3DSA:3.90.850.10 10 297 4.1E-88 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_09420 cbeca7392e2868211458388b3f110eb7 302 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 301 4.3E-65 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DOE78_09135 e2143c911cfcf83f73a21832df9200e5 142 SUPERFAMILY SSF46785 2 136 1.5E-36 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09135 e2143c911cfcf83f73a21832df9200e5 142 Gene3D G3DSA:1.10.10.10 1 141 1.4E-39 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09135 e2143c911cfcf83f73a21832df9200e5 142 Pfam PF02082 Transcriptional regulator 1 82 4.5E-25 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_09135 e2143c911cfcf83f73a21832df9200e5 142 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 5.2E-37 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_00445 df6350f5f51c6a9ee46c8e6185c5214d 257 Gene3D G3DSA:3.20.20.20 1 254 1.7E-109 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_00445 df6350f5f51c6a9ee46c8e6185c5214d 257 Pfam PF00809 Pterin binding enzyme 1 234 2.6E-86 T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_00445 df6350f5f51c6a9ee46c8e6185c5214d 257 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 01-11-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_00445 df6350f5f51c6a9ee46c8e6185c5214d 257 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 249 1.8E-99 T 01-11-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DOE78_00445 df6350f5f51c6a9ee46c8e6185c5214d 257 SUPERFAMILY SSF51717 1 251 2.09E-99 T 01-11-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DOE78_24370 e29ad636cbe454a4a705487f443cf41a 449 Pfam PF13520 Amino acid permease 10 407 4.6E-59 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_24370 e29ad636cbe454a4a705487f443cf41a 449 PIRSF PIRSF006060 1 448 9.7E-85 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_24370 e29ad636cbe454a4a705487f443cf41a 449 Gene3D G3DSA:1.20.1740.10 5 449 9.0E-91 T 01-11-2018 DOE78_23085 6fc5dbd9fc40d4b5fdb6ec58cc1bb843 377 Gene3D G3DSA:3.40.50.2000 187 374 2.1E-37 T 01-11-2018 DOE78_23085 6fc5dbd9fc40d4b5fdb6ec58cc1bb843 377 Pfam PF00534 Glycosyl transferases group 1 195 349 8.0E-31 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23085 6fc5dbd9fc40d4b5fdb6ec58cc1bb843 377 Gene3D G3DSA:3.40.50.2000 2 186 1.9E-20 T 01-11-2018 DOE78_23085 6fc5dbd9fc40d4b5fdb6ec58cc1bb843 377 SUPERFAMILY SSF53756 10 372 2.09E-68 T 01-11-2018 DOE78_23085 6fc5dbd9fc40d4b5fdb6ec58cc1bb843 377 Pfam PF13439 Glycosyltransferase Family 4 15 180 1.3E-18 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_09200 abe3fc4734aa0c68c5122e661b6b1924 434 PIRSF PIRSF006066 5 434 5.3E-92 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DOE78_09200 abe3fc4734aa0c68c5122e661b6b1924 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 430 1.1E-98 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DOE78_09200 abe3fc4734aa0c68c5122e661b6b1924 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 425 6.8E-91 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 PRINTS PR00050 Cold shock protein signature 39 57 6.3E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 PRINTS PR00050 Cold shock protein signature 24 33 6.3E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 PRINTS PR00050 Cold shock protein signature 4 19 6.3E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 8.6E-31 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 SMART SM00357 3 66 2.2E-31 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 01-11-2018 IPR019844 Cold-shock conserved site DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 Gene3D G3DSA:2.40.50.140 1 66 3.6E-30 T 01-11-2018 DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 SUPERFAMILY SSF50249 1 64 4.17E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_15170 0b9c5209cdf33e36f9ab9fc4dce1c024 66 PIRSF PIRSF002599 1 66 9.1E-25 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 DOE78_22700 a287026a0a8f637b146bcd71f39ceb88 328 SUPERFAMILY SSF161098 85 312 8.9E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_22700 a287026a0a8f637b146bcd71f39ceb88 328 Gene3D G3DSA:1.10.3720.10 79 328 2.9E-62 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_22700 a287026a0a8f637b146bcd71f39ceb88 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 314 1.1E-13 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_02755 c582d0a437951ba0c064e9fc32fcdd13 548 Gene3D G3DSA:3.40.190.10 42 181 5.8E-26 T 01-11-2018 DOE78_02755 c582d0a437951ba0c064e9fc32fcdd13 548 SUPERFAMILY SSF53850 20 548 3.93E-74 T 01-11-2018 DOE78_02755 c582d0a437951ba0c064e9fc32fcdd13 548 Gene3D G3DSA:3.40.190.10 182 406 2.3E-48 T 01-11-2018 DOE78_02755 c582d0a437951ba0c064e9fc32fcdd13 548 Pfam PF01547 Bacterial extracellular solute-binding protein 65 373 1.0E-17 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.0E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.0E-6 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 SUPERFAMILY SSF47413 3 59 2.11E-19 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 Gene3D G3DSA:1.10.260.40 1 60 8.0E-24 T 01-11-2018 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 Gene3D G3DSA:3.40.50.2300 61 154 3.6E-19 T 01-11-2018 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 Pfam PF13377 Periplasmic binding protein-like domain 174 334 1.1E-41 T 01-11-2018 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 SMART SM00354 2 72 2.2E-29 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 Gene3D G3DSA:3.40.50.2300 159 337 6.1E-60 T 01-11-2018 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.9E-20 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 SUPERFAMILY SSF53822 61 335 6.73E-80 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_21745 38a89a3c16d8d9b6167fc2edc0d6064f 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 01-11-2018 DOE78_18405 1de88695b94f478d640251db9fb0c9ed 212 Pfam PF02659 Putative manganese efflux pump 123 209 6.3E-11 T 01-11-2018 IPR003810 Putative manganese efflux pump DOE78_18405 1de88695b94f478d640251db9fb0c9ed 212 Pfam PF02659 Putative manganese efflux pump 6 83 2.8E-13 T 01-11-2018 IPR003810 Putative manganese efflux pump DOE78_18405 1de88695b94f478d640251db9fb0c9ed 212 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 7 212 2.0E-72 T 01-11-2018 IPR014205 Sporulation protein YtaF DOE78_24070 66762d7a1fe8299bcd50dce02f6cdba6 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_24070 66762d7a1fe8299bcd50dce02f6cdba6 241 Pfam PF00005 ABC transporter 22 163 8.4E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_24070 66762d7a1fe8299bcd50dce02f6cdba6 241 SUPERFAMILY SSF52540 5 226 5.1E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24070 66762d7a1fe8299bcd50dce02f6cdba6 241 Gene3D G3DSA:3.40.50.300 2 237 5.0E-67 T 01-11-2018 DOE78_24070 66762d7a1fe8299bcd50dce02f6cdba6 241 SMART SM00382 31 210 3.0E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.7E-45 T 01-11-2018 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 360 4.7E-12 T 01-11-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 SMART SM00382 37 179 3.2E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 Gene3D G3DSA:1.10.8.60 8 237 5.0E-107 T 01-11-2018 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 SUPERFAMILY SSF52540 31 222 3.13E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 4.5E-146 T 01-11-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 5.0E-5 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 5.0E-5 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 Gene3D G3DSA:3.40.50.300 13 177 5.0E-107 T 01-11-2018 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 SUPERFAMILY SSF48019 244 359 2.89E-25 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DOE78_00135 6f3dcfba46fd1217f299b1d8d8ddac7f 570 Gene3D G3DSA:1.20.272.10 242 362 7.5E-7 T 01-11-2018 DOE78_01985 0efa038f48607373685ba1146bd141b4 494 Pfam PF00474 Sodium:solute symporter family 35 434 1.4E-109 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_01985 0efa038f48607373685ba1146bd141b4 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 8 486 1.4E-217 T 01-11-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 DOE78_01985 0efa038f48607373685ba1146bd141b4 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site DOE78_01985 0efa038f48607373685ba1146bd141b4 494 Gene3D G3DSA:1.20.1730.10 22 493 5.4E-98 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily DOE78_01985 0efa038f48607373685ba1146bd141b4 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 01-11-2018 IPR018212 Sodium/solute symporter, conserved site DOE78_01985 0efa038f48607373685ba1146bd141b4 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 434 2.1E-99 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 9.8E-218 T 01-11-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 Pfam PF13481 AAA domain 78 223 1.8E-17 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 367 431 3.0E-9 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 45.283 T 01-11-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 SMART SM00382 91 245 1.8E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00570 f95bc40624793b233640f5e34daebb00 458 Gene3D G3DSA:3.40.50.300 67 290 3.2E-42 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 Gene3D G3DSA:3.30.230.10 298 458 3.5E-21 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_00570 f95bc40624793b233640f5e34daebb00 458 SUPERFAMILY SSF54211 256 457 1.14E-43 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_00570 f95bc40624793b233640f5e34daebb00 458 SUPERFAMILY SSF52540 72 292 1.26E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00570 f95bc40624793b233640f5e34daebb00 458 PRINTS PR01874 DNA repair protein radA signature 323 346 1.2E-94 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 PRINTS PR01874 DNA repair protein radA signature 125 142 1.2E-94 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 PRINTS PR01874 DNA repair protein radA signature 83 111 1.2E-94 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 PRINTS PR01874 DNA repair protein radA signature 175 199 1.2E-94 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 PRINTS PR01874 DNA repair protein radA signature 10 34 1.2E-94 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 PRINTS PR01874 DNA repair protein radA signature 214 242 1.2E-94 T 01-11-2018 DOE78_00570 f95bc40624793b233640f5e34daebb00 458 PRINTS PR01874 DNA repair protein radA signature 249 275 1.2E-94 T 01-11-2018 DOE78_23955 dababcd8f98817b7db8905834e1cc68b 74 Pfam PF07293 Protein of unknown function (DUF1450) 8 73 2.0E-8 T 01-11-2018 IPR009910 Protein of unknown function DUF1450 DOE78_23955 dababcd8f98817b7db8905834e1cc68b 74 Hamap MF_01863 UPF0741 protein . 1 74 30.969 T 01-11-2018 IPR020880 Protein of unknown function UPF0741 DOE78_10865 cfbcd021fbc18772d0833a0b9399b660 173 SUPERFAMILY SSF46565 122 170 1.05E-9 T 01-11-2018 IPR036869 Chaperone J-domain superfamily DOE78_10865 cfbcd021fbc18772d0833a0b9399b660 173 Gene3D G3DSA:1.10.287.110 119 173 1.2E-8 T 01-11-2018 IPR036869 Chaperone J-domain superfamily DOE78_09285 e66de0ed09e782bed7ca145ef4ccdf99 337 Gene3D G3DSA:3.40.50.10490 166 325 1.9E-50 T 01-11-2018 DOE78_09285 e66de0ed09e782bed7ca145ef4ccdf99 337 SUPERFAMILY SSF53697 21 337 1.48E-53 T 01-11-2018 DOE78_09285 e66de0ed09e782bed7ca145ef4ccdf99 337 Pfam PF01380 SIS domain 37 145 3.6E-11 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_09285 e66de0ed09e782bed7ca145ef4ccdf99 337 PIRSF PIRSF009290 1 337 3.1E-118 T 01-11-2018 IPR024713 Fructosamine deglycase FrlB DOE78_09285 e66de0ed09e782bed7ca145ef4ccdf99 337 Gene3D G3DSA:3.40.50.10490 3 165 1.6E-35 T 01-11-2018 DOE78_04700 58768b5fb8e3e92cd28585391cd58440 223 Gene3D G3DSA:3.20.20.70 1 218 3.3E-72 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_04700 58768b5fb8e3e92cd28585391cd58440 223 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 208 1.3E-57 T 01-11-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DOE78_04700 58768b5fb8e3e92cd28585391cd58440 223 SUPERFAMILY SSF51569 2 209 2.56E-63 T 01-11-2018 DOE78_04700 58768b5fb8e3e92cd28585391cd58440 223 Pfam PF01081 KDPG and KHG aldolase 8 199 3.1E-46 T 01-11-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DOE78_01695 11941d100192338d338b73e4da900909 375 SUPERFAMILY SSF52540 128 371 4.24E-29 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01695 11941d100192338d338b73e4da900909 375 Gene3D G3DSA:3.40.50.300 126 369 5.1E-40 T 01-11-2018 DOE78_01695 11941d100192338d338b73e4da900909 375 Pfam PF13614 AAA domain 129 299 8.3E-13 T 01-11-2018 IPR025669 AAA domain DOE78_14205 5f2c6129d023620a36f0db69d505814f 348 PIRSF PIRSF006470 12 345 4.6E-112 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DOE78_14205 5f2c6129d023620a36f0db69d505814f 348 Gene3D G3DSA:3.40.190.170 39 348 1.3E-117 T 01-11-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DOE78_14205 5f2c6129d023620a36f0db69d505814f 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 327 3.6E-100 T 01-11-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DOE78_14205 5f2c6129d023620a36f0db69d505814f 348 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 48 299 2.6E-85 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DOE78_20930 e250bf084aad5d2273575bdf8468a5d3 197 SUPERFAMILY SSF56524 10 197 2.49E-60 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DOE78_20930 e250bf084aad5d2273575bdf8468a5d3 197 Gene3D G3DSA:3.90.420.10 8 195 6.3E-44 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DOE78_20930 e250bf084aad5d2273575bdf8468a5d3 197 Pfam PF00174 Oxidoreductase molybdopterin binding domain 29 177 1.2E-35 T 01-11-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DOE78_11295 0e01400e3238752e0df6c635401a5398 1266 Gene3D G3DSA:3.20.20.80 55 391 1.2E-86 T 01-11-2018 DOE78_11295 0e01400e3238752e0df6c635401a5398 1266 Gene3D G3DSA:2.60.120.560 549 786 3.1E-50 T 01-11-2018 DOE78_11295 0e01400e3238752e0df6c635401a5398 1266 Pfam PF02057 Glycosyl hydrolase family 59 55 283 6.5E-21 T 01-11-2018 IPR001286 Glycoside hydrolase, family 59 GO:0004336|GO:0006683 KEGG: 00600+3.2.1.46|Reactome: R-HSA-1660662 DOE78_11295 0e01400e3238752e0df6c635401a5398 1266 Gene3D G3DSA:2.60.40.1180 54 528 1.2E-86 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_11295 0e01400e3238752e0df6c635401a5398 1266 Gene3D G3DSA:2.60.120.260 858 976 2.7E-11 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_11295 0e01400e3238752e0df6c635401a5398 1266 SUPERFAMILY SSF51445 55 302 1.37E-13 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_11295 0e01400e3238752e0df6c635401a5398 1266 Gene3D G3DSA:1.20.1270.70 1191 1257 1.6E-6 T 01-11-2018 DOE78_22900 692b4679b403057c65077bfce09f1e22 72 SUPERFAMILY SSF117130 1 55 1.57E-19 T 01-11-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DOE78_22900 692b4679b403057c65077bfce09f1e22 72 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 67 9.0E-27 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DOE78_22900 692b4679b403057c65077bfce09f1e22 72 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 17.777 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DOE78_22900 692b4679b403057c65077bfce09f1e22 72 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 47 5.0E-11 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DOE78_22900 692b4679b403057c65077bfce09f1e22 72 Gene3D G3DSA:3.30.70.1680 1 63 8.6E-27 T 01-11-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DOE78_22900 692b4679b403057c65077bfce09f1e22 72 Pfam PF02599 Global regulator protein family 1 52 1.0E-25 T 01-11-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 SUPERFAMILY SSF56601 338 665 5.46E-75 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 Pfam PF03717 Penicillin-binding Protein dimerisation domain 155 319 4.8E-35 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 Gene3D G3DSA:3.40.710.10 337 667 3.7E-84 T 01-11-2018 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 25 148 9.9E-24 T 01-11-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 Gene3D G3DSA:3.30.1390.30 176 249 2.6E-50 T 01-11-2018 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 SUPERFAMILY SSF56519 152 337 4.32E-38 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 Gene3D G3DSA:3.10.450.100 23 143 1.2E-20 T 01-11-2018 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 Pfam PF00905 Penicillin binding protein transpeptidase domain 356 663 1.8E-65 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 Gene3D G3DSA:3.90.1310.10 155 333 2.6E-50 T 01-11-2018 DOE78_23335 3228fb589ec545875d766f0fd2d95a80 667 SUPERFAMILY SSF54427 26 146 9.64E-28 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_17880 11f8e08f6e2a6bbe8be7250c0cf77bf3 367 Gene3D G3DSA:3.40.50.10800 29 347 4.1E-81 T 01-11-2018 DOE78_17880 11f8e08f6e2a6bbe8be7250c0cf77bf3 367 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 20 365 4.9E-114 T 01-11-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DOE78_17880 11f8e08f6e2a6bbe8be7250c0cf77bf3 367 Pfam PF02445 Quinolinate synthetase A protein 28 365 4.8E-105 T 01-11-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DOE78_17880 11f8e08f6e2a6bbe8be7250c0cf77bf3 367 Gene3D G3DSA:3.40.50.10800 229 316 4.1E-81 T 01-11-2018 DOE78_17880 11f8e08f6e2a6bbe8be7250c0cf77bf3 367 Gene3D G3DSA:3.40.50.10800 111 365 4.1E-81 T 01-11-2018 DOE78_17880 11f8e08f6e2a6bbe8be7250c0cf77bf3 367 SUPERFAMILY SSF142754 31 365 7.85E-96 T 01-11-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DOE78_17880 11f8e08f6e2a6bbe8be7250c0cf77bf3 367 Hamap MF_00569 Quinolinate synthase A [nadA]. 21 366 55.736 T 01-11-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DOE78_22140 823371f1dc9b0ebb3286dcc84b831911 297 Pfam PF03668 P-loop ATPase protein family 10 292 2.9E-129 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 DOE78_22140 823371f1dc9b0ebb3286dcc84b831911 297 Gene3D G3DSA:3.40.50.300 5 177 5.2E-5 T 01-11-2018 DOE78_22140 823371f1dc9b0ebb3286dcc84b831911 297 SUPERFAMILY SSF52540 11 166 6.64E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22140 823371f1dc9b0ebb3286dcc84b831911 297 PIRSF PIRSF005052 9 294 3.0E-108 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 DOE78_22140 823371f1dc9b0ebb3286dcc84b831911 297 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 291 41.945 T 01-11-2018 IPR005337 RapZ-like family GO:0005524 DOE78_01900 fe57e1e2863cdaa47926aaec9b11c43c 104 Gene3D G3DSA:1.10.1270.10 2 104 2.5E-40 T 01-11-2018 IPR038116 TrpR-like superfamily DOE78_01900 fe57e1e2863cdaa47926aaec9b11c43c 104 PIRSF PIRSF012508 1 100 3.5E-49 T 01-11-2018 IPR013368 TrpR homologue YerC/YecD DOE78_01900 fe57e1e2863cdaa47926aaec9b11c43c 104 SUPERFAMILY SSF48295 3 95 1.31E-33 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DOE78_01900 fe57e1e2863cdaa47926aaec9b11c43c 104 Pfam PF01371 Trp repressor protein 10 94 5.8E-35 T 01-11-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 DOE78_01900 fe57e1e2863cdaa47926aaec9b11c43c 104 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 6.4E-50 T 01-11-2018 IPR013368 TrpR homologue YerC/YecD DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 Gene3D G3DSA:3.50.50.60 6 409 1.9E-122 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 Gene3D G3DSA:1.10.8.260 279 343 1.9E-122 T 01-11-2018 IPR023166 HI0933-like insert domain superfamily DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 SUPERFAMILY SSF51905 1 414 6.85E-62 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 Gene3D G3DSA:2.40.30.10 192 360 1.9E-122 T 01-11-2018 DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 1.8E-6 T 01-11-2018 DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-6 T 01-11-2018 DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.8E-6 T 01-11-2018 DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 412 6.4E-143 T 01-11-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 3.5E-8 T 01-11-2018 DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.5E-8 T 01-11-2018 DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 SUPERFAMILY SSF160996 193 361 1.57E-47 T 01-11-2018 DOE78_19380 c9a0318392b642660dfbdc17a7142ce9 423 Pfam PF03486 HI0933-like protein 3 413 1.1E-151 T 01-11-2018 DOE78_15540 ec06bf5bcf072f61c1075eadad810bbc 243 SMART SM00563 73 187 1.5E-33 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DOE78_15540 ec06bf5bcf072f61c1075eadad810bbc 243 SUPERFAMILY SSF69593 55 237 6.02E-44 T 01-11-2018 DOE78_15540 ec06bf5bcf072f61c1075eadad810bbc 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 57 184 2.7E-36 T 01-11-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 DOE78_15540 ec06bf5bcf072f61c1075eadad810bbc 243 Pfam PF01553 Acyltransferase 59 185 4.8E-28 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DOE78_00820 fa4b43400d0bb52d41f126b59a4c9d84 146 Gene3D G3DSA:3.100.10.10 66 146 8.2E-27 T 01-11-2018 DOE78_00820 fa4b43400d0bb52d41f126b59a4c9d84 146 SUPERFAMILY SSF52080 4 143 5.49E-50 T 01-11-2018 IPR036227 Ribosomal L18e/L15P superfamily DOE78_00820 fa4b43400d0bb52d41f126b59a4c9d84 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 144 2.4E-38 T 01-11-2018 IPR021131 Ribosomal protein L18e/L15P DOE78_00820 fa4b43400d0bb52d41f126b59a4c9d84 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 01-11-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00820 fa4b43400d0bb52d41f126b59a4c9d84 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.866 T 01-11-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DOE78_00820 fa4b43400d0bb52d41f126b59a4c9d84 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.2E-56 T 01-11-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24635 832df94dc46f035a05970bd1c551bb5f 95 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 01-11-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 DOE78_24635 832df94dc46f035a05970bd1c551bb5f 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 2.1E-31 T 01-11-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24635 832df94dc46f035a05970bd1c551bb5f 95 SUPERFAMILY SSF54995 1 94 5.89E-33 T 01-11-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24635 832df94dc46f035a05970bd1c551bb5f 95 Gene3D G3DSA:3.30.70.60 1 95 4.2E-34 T 01-11-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DOE78_24635 832df94dc46f035a05970bd1c551bb5f 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 22.848 T 01-11-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DOE78_24635 832df94dc46f035a05970bd1c551bb5f 95 Pfam PF01250 Ribosomal protein S6 4 92 4.3E-29 T 01-11-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24700 d94da70f1f1b4d0a990d68b4261a6220 238 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 217 6.0E-52 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DOE78_24700 d94da70f1f1b4d0a990d68b4261a6220 238 SUPERFAMILY SSF53335 1 237 2.24E-50 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_24700 d94da70f1f1b4d0a990d68b4261a6220 238 Pfam PF02527 rRNA small subunit methyltransferase G 21 202 1.6E-58 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DOE78_24700 d94da70f1f1b4d0a990d68b4261a6220 238 PIRSF PIRSF003078 2 220 4.5E-59 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DOE78_24700 d94da70f1f1b4d0a990d68b4261a6220 238 Gene3D G3DSA:3.40.50.150 1 238 1.7E-87 T 01-11-2018 DOE78_24700 d94da70f1f1b4d0a990d68b4261a6220 238 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.526 T 01-11-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 SUPERFAMILY SSF47413 3 51 1.59E-12 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 Pfam PF13377 Periplasmic binding protein-like domain 162 328 8.0E-34 T 01-11-2018 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.3E-7 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.3E-7 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 Gene3D G3DSA:3.40.50.2300 72 317 1.5E-48 T 01-11-2018 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 Gene3D G3DSA:1.10.260.40 1 47 4.7E-18 T 01-11-2018 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 SUPERFAMILY SSF53822 72 322 1.63E-47 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 SMART SM00354 1 68 7.1E-12 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.1E-17 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_03980 100dde099ee6b05457ccf0508f7c2f30 329 Gene3D G3DSA:3.40.50.2300 155 289 1.5E-48 T 01-11-2018 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Pfam PF17137 Domain of unknown function (DUF5110) 724 793 1.0E-13 T 01-11-2018 IPR033403 Domain of unknown function DUF5110 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 SUPERFAMILY SSF74650 44 267 1.41E-44 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 ProSitePatterns PS00129 Glycosyl hydrolases family 31 active site. 427 434 - T 01-11-2018 IPR030458 Glycosyl hydrolases family 31, active site DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Gene3D G3DSA:3.20.20.80 267 624 1.4E-129 T 01-11-2018 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Pfam PF16338 Domain of unknown function (DUF4968) 59 150 1.2E-12 T 01-11-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Pfam PF13802 Galactose mutarotase-like 174 239 6.8E-19 T 01-11-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 SUPERFAMILY SSF51011 623 703 6.47E-25 T 01-11-2018 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Gene3D G3DSA:2.60.40.1180 706 847 2.2E-27 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Gene3D G3DSA:2.60.40.1760 47 265 7.6E-48 T 01-11-2018 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Gene3D G3DSA:2.60.40.1180 628 704 3.8E-29 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 Pfam PF01055 Glycosyl hydrolases family 31 261 708 2.8E-151 T 01-11-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DOE78_13610 5c35ff5aae17ad4b34f43027aa73d0b3 847 SUPERFAMILY SSF51445 270 621 2.48E-79 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_12500 83113532581c367e4de9f5193c6d6552 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.2E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_12500 83113532581c367e4de9f5193c6d6552 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.2E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_12500 83113532581c367e4de9f5193c6d6552 182 Gene3D G3DSA:1.10.357.10 5 182 1.3E-44 T 01-11-2018 DOE78_12500 83113532581c367e4de9f5193c6d6552 182 SUPERFAMILY SSF46689 6 70 4.16E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_12500 83113532581c367e4de9f5193c6d6552 182 SUPERFAMILY SSF48498 108 179 2.22E-6 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_12500 83113532581c367e4de9f5193c6d6552 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.6E-12 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_18255 89763da8b1917b3bdea29e8c4b7d76bb 257 SUPERFAMILY SSF52096 3 256 1.9E-80 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_18255 89763da8b1917b3bdea29e8c4b7d76bb 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DOE78_18255 89763da8b1917b3bdea29e8c4b7d76bb 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 3.4E-62 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DOE78_18255 89763da8b1917b3bdea29e8c4b7d76bb 257 Gene3D G3DSA:3.90.226.10 2 257 1.2E-88 T 01-11-2018 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 Gene3D G3DSA:3.30.559.10 173 421 1.4E-97 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 Pfam PF00364 Biotin-requiring enzyme 4 77 2.5E-23 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 191 413 2.5E-81 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 Gene3D G3DSA:4.10.320.10 108 152 2.6E-14 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 SUPERFAMILY SSF52777 192 412 1.16E-82 T 01-11-2018 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 Gene3D G3DSA:2.40.50.100 2 101 1.9E-26 T 01-11-2018 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 SUPERFAMILY SSF47005 107 151 1.02E-10 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 SUPERFAMILY SSF51230 3 95 3.53E-27 T 01-11-2018 IPR011053 Single hybrid motif DOE78_16750 7154ac6d8c0d6525995669a032228abb 421 Pfam PF02817 e3 binding domain 113 147 2.0E-11 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DOE78_21735 c6ce3348e522d444cf45baccdfff291b 421 Pfam PF13416 Bacterial extracellular solute-binding protein 65 360 3.7E-39 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_21735 c6ce3348e522d444cf45baccdfff291b 421 Gene3D G3DSA:3.40.190.10 34 418 1.7E-85 T 01-11-2018 DOE78_21735 c6ce3348e522d444cf45baccdfff291b 421 SUPERFAMILY SSF53850 48 415 7.09E-84 T 01-11-2018 DOE78_12950 dab7b1bffd15af1f8c78f45917067fe4 217 Gene3D G3DSA:3.90.1470.20 15 132 2.9E-42 T 01-11-2018 DOE78_12950 dab7b1bffd15af1f8c78f45917067fe4 217 Gene3D G3DSA:3.40.50.1000 7 206 2.9E-42 T 01-11-2018 IPR023214 HAD superfamily DOE78_12950 dab7b1bffd15af1f8c78f45917067fe4 217 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 183 6.6E-40 T 01-11-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 DOE78_12950 dab7b1bffd15af1f8c78f45917067fe4 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 169 1.2E-9 T 01-11-2018 DOE78_12950 dab7b1bffd15af1f8c78f45917067fe4 217 SUPERFAMILY SSF56784 1 209 1.4E-34 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_12950 dab7b1bffd15af1f8c78f45917067fe4 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 170 5.0E-25 T 01-11-2018 DOE78_04930 f1965710c43aed1c7f06a06b3cf3f733 269 SUPERFAMILY SSF158430 130 262 1.23E-41 T 01-11-2018 DOE78_04930 f1965710c43aed1c7f06a06b3cf3f733 269 SUPERFAMILY SSF158430 8 128 3.14E-28 T 01-11-2018 DOE78_04930 f1965710c43aed1c7f06a06b3cf3f733 269 Gene3D G3DSA:1.20.1260.120 1 269 1.5E-90 T 01-11-2018 DOE78_04930 f1965710c43aed1c7f06a06b3cf3f733 269 Pfam PF11155 Domain of unknown function (DUF2935) 8 113 1.8E-19 T 01-11-2018 IPR021328 Protein of unknown function DUF2935 DOE78_04930 f1965710c43aed1c7f06a06b3cf3f733 269 Pfam PF11155 Domain of unknown function (DUF2935) 131 249 8.7E-28 T 01-11-2018 IPR021328 Protein of unknown function DUF2935 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 Gene3D G3DSA:1.10.8.60 269 357 1.0E-28 T 01-11-2018 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 131 262 1.3E-13 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 Gene3D G3DSA:3.40.50.300 77 268 2.5E-66 T 01-11-2018 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 Pfam PF07724 AAA domain (Cdc48 subfamily) 452 617 1.1E-51 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 SMART SM00382 126 270 3.4E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 SMART SM00382 453 625 4.0E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 SUPERFAMILY SSF52540 402 699 1.05E-78 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 221 233 - T 01-11-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 487 505 - T 01-11-2018 IPR028299 ClpA/B, conserved site 2 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 623 693 1.9E-21 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 SUPERFAMILY SSF52540 88 339 6.29E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 Gene3D G3DSA:1.10.8.60 623 712 1.9E-23 T 01-11-2018 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 SMART SM01086 623 710 7.7E-28 T 01-11-2018 IPR019489 Clp ATPase, C-terminal DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 Gene3D G3DSA:3.40.50.300 384 621 7.7E-90 T 01-11-2018 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 502 520 1.3E-37 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 1.3E-37 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 457 475 1.3E-37 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_07120 370fac28bc0732a2b641d71f1c026c39 713 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 578 1.3E-37 T 01-11-2018 IPR001270 ClpA/B family GO:0005524 DOE78_00785 59411b545969fdea64c19944f8b05980 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 8.1E-42 T 01-11-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00785 59411b545969fdea64c19944f8b05980 179 Pfam PF00281 Ribosomal protein L5 25 80 2.2E-29 T 01-11-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00785 59411b545969fdea64c19944f8b05980 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.817 T 01-11-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00785 59411b545969fdea64c19944f8b05980 179 SUPERFAMILY SSF55282 3 178 1.48E-79 T 01-11-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00785 59411b545969fdea64c19944f8b05980 179 PIRSF PIRSF002161 1 179 1.9E-69 T 01-11-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00785 59411b545969fdea64c19944f8b05980 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 01-11-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00785 59411b545969fdea64c19944f8b05980 179 Gene3D G3DSA:3.30.1440.10 1 179 7.2E-85 T 01-11-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_06560 9be839aab9266bd9d0bbb389e337c823 336 Pfam PF00005 ABC transporter 47 197 4.8E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06560 9be839aab9266bd9d0bbb389e337c823 336 SMART SM00382 55 247 8.8E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_06560 9be839aab9266bd9d0bbb389e337c823 336 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_06560 9be839aab9266bd9d0bbb389e337c823 336 Gene3D G3DSA:3.40.50.300 17 336 1.3E-102 T 01-11-2018 DOE78_06560 9be839aab9266bd9d0bbb389e337c823 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 334 2.4E-29 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_06560 9be839aab9266bd9d0bbb389e337c823 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 314 6.3E-19 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_06560 9be839aab9266bd9d0bbb389e337c823 336 SUPERFAMILY SSF52540 19 269 1.57E-73 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Gene3D G3DSA:3.30.65.10 559 618 3.6E-14 T 01-11-2018 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 2.2E-267 T 01-11-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 SMART SM00493 3 103 4.0E-34 T 01-11-2018 IPR006171 TOPRIM domain DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 SUPERFAMILY SSF57783 574 612 8.33E-14 T 01-11-2018 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 56.749 T 01-11-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 SMART SM00436 104 192 1.0E-52 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 SMART SM00437 242 510 1.5E-129 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Gene3D G3DSA:2.70.20.10 184 457 4.4E-170 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Gene3D G3DSA:1.10.460.10 135 550 4.4E-170 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Pfam PF01751 Toprim domain 5 113 9.5E-30 T 01-11-2018 IPR006171 TOPRIM domain DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Gene3D G3DSA:1.10.290.10 250 385 4.4E-170 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 576 612 1.6E-16 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 688 0.039 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 4.3E-12 T 01-11-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 SUPERFAMILY SSF56712 4 589 7.19E-203 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Pfam PF01131 DNA topoisomerase 128 547 1.2E-138 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 Gene3D G3DSA:3.40.50.140 1 134 2.2E-54 T 01-11-2018 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 3.1E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 3.1E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 3.1E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 3.1E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_08120 42dc09cda2e94fe4829a45ef611c9a5d 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 3.1E-36 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_11285 261b8f583c993193d827072ad74605b7 105 Pfam PF11553 Protein of unknown function (DUF3231) 32 100 5.0E-9 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_11285 261b8f583c993193d827072ad74605b7 105 Gene3D G3DSA:1.20.1260.10 5 91 4.5E-17 T 01-11-2018 IPR012347 Ferritin-like DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 22 463 1.9E-188 T 01-11-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 SUPERFAMILY SSF49899 337 489 1.74E-37 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 SMART SM00640 37 453 2.7E-156 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 SUPERFAMILY SSF75005 27 338 3.77E-112 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 337 5.3E-105 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 Gene3D G3DSA:2.60.120.560 347 480 1.3E-140 T 01-11-2018 DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 37 50 - T 01-11-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 340 481 2.2E-31 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_10320 4b21a2adbf99ee9fa3aeb64ba6869a8b 492 Gene3D G3DSA:2.115.10.20 32 346 1.3E-140 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 Pfam PF00912 Transglycosylase 97 280 4.6E-54 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 SUPERFAMILY SSF56601 264 743 8.97E-102 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 Gene3D G3DSA:1.10.20.80 316 600 2.9E-133 T 01-11-2018 DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 Gene3D G3DSA:3.40.710.10 374 705 2.9E-133 T 01-11-2018 DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 Gene3D G3DSA:1.10.3810.10 104 311 5.0E-67 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 Gene3D G3DSA:2.60.40.10 833 915 4.4E-6 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 Pfam PF00905 Penicillin binding protein transpeptidase domain 417 662 3.7E-27 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_19165 0e1c0938277e9c2875943118a20b6679 971 SUPERFAMILY SSF53955 80 305 5.34E-63 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 Pfam PF01584 CheW-like domain 18 150 9.2E-35 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 SMART SM00260 13 149 1.6E-32 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 Pfam PF00072 Response regulator receiver domain 177 296 7.8E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 Gene3D G3DSA:3.40.50.2300 168 301 5.3E-27 T 01-11-2018 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 Gene3D G3DSA:2.40.50.180 34 149 3.7E-36 T 01-11-2018 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 SUPERFAMILY SSF50341 7 151 4.45E-36 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 SMART SM00448 174 296 3.1E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 SUPERFAMILY SSF52172 174 300 1.99E-24 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 Gene3D G3DSA:2.30.30.40 19 143 3.7E-36 T 01-11-2018 DOE78_07200 aa59a3a0ec8531c670acbdb5c9e60a83 301 PIRSF PIRSF002867 1 301 8.5E-106 T 01-11-2018 IPR024181 Chemotaxis response regulator CheV DOE78_22620 f32964e7a48018b2685186bf5bdaeb19 354 SUPERFAMILY SSF109604 124 282 6.28E-29 T 01-11-2018 DOE78_22620 f32964e7a48018b2685186bf5bdaeb19 354 TIGRFAM TIGR00277 HDIG: HDIG domain 135 213 2.4E-7 T 01-11-2018 IPR006675 HDIG domain DOE78_22620 f32964e7a48018b2685186bf5bdaeb19 354 SMART SM00471 131 267 3.6E-10 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_22620 f32964e7a48018b2685186bf5bdaeb19 354 Gene3D G3DSA:1.10.3210.10 8 299 4.8E-63 T 01-11-2018 DOE78_22620 f32964e7a48018b2685186bf5bdaeb19 354 Pfam PF13487 HD domain 186 249 4.4E-15 T 01-11-2018 DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 Gene3D G3DSA:1.20.1560.10 1 323 3.1E-102 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 Pfam PF00005 ABC transporter 352 501 1.0E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 Pfam PF00664 ABC transporter transmembrane region 22 290 5.1E-57 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 Gene3D G3DSA:3.40.50.300 327 576 1.6E-89 T 01-11-2018 DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 SUPERFAMILY SSF90123 7 321 1.03E-82 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 SMART SM00382 361 533 6.7E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 SUPERFAMILY SSF52540 329 571 1.11E-89 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24125 4e01baaad3af659942a9ca9c754d5611 577 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 Gene3D G3DSA:3.30.420.150 109 299 3.1E-58 T 01-11-2018 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 Pfam PF02541 Ppx/GppA phosphatase family 30 300 4.8E-54 T 01-11-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 SUPERFAMILY SSF53067 3 124 1.16E-28 T 01-11-2018 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 SUPERFAMILY SSF109604 312 501 1.44E-22 T 01-11-2018 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 Gene3D G3DSA:3.30.420.40 1 108 3.0E-26 T 01-11-2018 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 SUPERFAMILY SSF53067 128 300 6.83E-44 T 01-11-2018 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 Gene3D G3DSA:1.10.3210.10 311 502 6.0E-34 T 01-11-2018 DOE78_07210 8720fb6d375cb714ea054c9af3e19f1b 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 4 300 2.9E-92 T 01-11-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 DOE78_08470 e80162b25f9011783360ae46af294481 223 Gene3D G3DSA:3.90.226.10 15 199 9.6E-33 T 01-11-2018 DOE78_08470 e80162b25f9011783360ae46af294481 223 Pfam PF00574 Clp protease 22 198 1.7E-34 T 01-11-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DOE78_08470 e80162b25f9011783360ae46af294481 223 SUPERFAMILY SSF52096 10 206 7.55E-40 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 SUPERFAMILY SSF53927 4 140 8.39E-42 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 356 2.9E-118 T 01-11-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 SUPERFAMILY SSF53597 146 359 1.49E-57 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 357 5.4E-67 T 01-11-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 01-11-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 PIRSF PIRSF006769 1 361 3.0E-126 T 01-11-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 Gene3D G3DSA:3.40.140.10 1 136 8.8E-41 T 01-11-2018 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 Pfam PF01872 RibD C-terminal domain 148 355 2.2E-54 T 01-11-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 2.8E-19 T 01-11-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DOE78_14120 d8959c82d9679aad241b056b6ac04f6b 363 Gene3D G3DSA:3.40.430.10 137 362 7.5E-72 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DOE78_19595 2f39b520986468ed90a8bde26a6fe331 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 56.658 T 01-11-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DOE78_19595 2f39b520986468ed90a8bde26a6fe331 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 6.0E-133 T 01-11-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DOE78_19595 2f39b520986468ed90a8bde26a6fe331 272 Gene3D G3DSA:1.10.12.10 210 260 6.0E-29 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DOE78_19595 2f39b520986468ed90a8bde26a6fe331 272 Gene3D G3DSA:3.90.226.10 1 209 2.2E-78 T 01-11-2018 DOE78_19595 2f39b520986468ed90a8bde26a6fe331 272 SUPERFAMILY SSF52096 5 267 3.98E-80 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_19595 2f39b520986468ed90a8bde26a6fe331 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 9.3E-93 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 SUPERFAMILY SSF55874 425 566 4.58E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 Gene3D G3DSA:3.30.565.10 424 569 1.2E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 Pfam PF06580 Histidine kinase 370 448 9.9E-22 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 SUPERFAMILY SSF158472 306 357 7.85E-9 T 01-11-2018 DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 567 1.5E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 SMART SM00304 306 358 6.8E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 Pfam PF00672 HAMP domain 306 355 7.7E-7 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 Gene3D G3DSA:1.20.1480.50 272 363 4.0E-12 T 01-11-2018 DOE78_12200 168804d5509cb561d1eb31ac3fad6827 569 SMART SM00387 464 569 8.0E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_23065 f28d808a580e7f7b6be667b6cba8bd55 622 SUPERFAMILY SSF51735 147 278 1.85E-14 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_23065 f28d808a580e7f7b6be667b6cba8bd55 622 Gene3D G3DSA:3.40.50.720 145 271 4.1E-34 T 01-11-2018 DOE78_23065 f28d808a580e7f7b6be667b6cba8bd55 622 Pfam PF13727 CoA-binding domain 63 245 1.9E-13 T 01-11-2018 DOE78_23065 f28d808a580e7f7b6be667b6cba8bd55 622 Gene3D G3DSA:3.40.50.720 285 620 1.3E-119 T 01-11-2018 DOE78_23065 f28d808a580e7f7b6be667b6cba8bd55 622 Pfam PF02719 Polysaccharide biosynthesis protein 290 572 1.2E-123 T 01-11-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DOE78_23065 f28d808a580e7f7b6be667b6cba8bd55 622 SUPERFAMILY SSF51735 287 552 1.73E-59 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 Pfam PF00005 ABC transporter 350 499 1.0E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 SUPERFAMILY SSF52540 330 569 4.66E-88 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 Pfam PF00664 ABC transporter transmembrane region 18 289 5.6E-49 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 SUPERFAMILY SSF90123 5 313 4.97E-78 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 SMART SM00382 359 545 2.5E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 Gene3D G3DSA:1.20.1560.10 1 319 1.9E-85 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08905 a9cc5411128bd13f4937dc319cffd765 583 Gene3D G3DSA:3.40.50.300 325 574 2.6E-87 T 01-11-2018 DOE78_15255 ffa579e87431579a93e21e0098d2f844 375 SUPERFAMILY SSF51338 3 373 1.07E-23 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_15255 ffa579e87431579a93e21e0098d2f844 375 Gene3D G3DSA:3.20.20.140 57 334 2.2E-103 T 01-11-2018 DOE78_15255 ffa579e87431579a93e21e0098d2f844 375 SUPERFAMILY SSF51556 56 338 4.89E-43 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_15255 ffa579e87431579a93e21e0098d2f844 375 Pfam PF01979 Amidohydrolase family 53 371 4.3E-20 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_15255 ffa579e87431579a93e21e0098d2f844 375 Gene3D G3DSA:2.30.40.10 6 368 2.2E-103 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_01315 240a56684ba40617a08d62b7736f0818 240 Pfam PF01694 Rhomboid family 55 192 2.2E-36 T 01-11-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DOE78_01315 240a56684ba40617a08d62b7736f0818 240 Gene3D G3DSA:1.20.1540.10 9 199 1.7E-38 T 01-11-2018 IPR035952 Rhomboid-like superfamily DOE78_01315 240a56684ba40617a08d62b7736f0818 240 SUPERFAMILY SSF144091 12 190 4.97E-39 T 01-11-2018 DOE78_19885 36589d3f53c3d98449c3722c8914ef12 259 SUPERFAMILY SSF53335 34 253 6.63E-40 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_19885 36589d3f53c3d98449c3722c8914ef12 259 Pfam PF08241 Methyltransferase domain 48 142 3.0E-22 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 DOE78_19885 36589d3f53c3d98449c3722c8914ef12 259 Gene3D G3DSA:3.40.50.150 24 258 1.4E-56 T 01-11-2018 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 470 3.0E-34 T 01-11-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 SUPERFAMILY SSF50800 71 167 7.33E-25 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 Gene3D G3DSA:2.40.33.10 71 167 4.2E-150 T 01-11-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 SUPERFAMILY SSF52935 323 473 3.14E-43 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.3E-190 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 Gene3D G3DSA:3.50.30.10 474 585 1.3E-33 T 01-11-2018 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 01-11-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 SUPERFAMILY SSF52009 465 582 1.7E-29 T 01-11-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.0E-81 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.0E-81 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.0E-81 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.0E-81 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.0E-81 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.0E-81 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.0E-81 T 01-11-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 SUPERFAMILY SSF51621 1 343 7.33E-105 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 Gene3D G3DSA:3.20.20.60 4 332 4.2E-150 T 01-11-2018 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 Gene3D G3DSA:3.40.1380.20 340 473 6.9E-45 T 01-11-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 Pfam PF00224 Pyruvate kinase, barrel domain 1 344 5.1E-157 T 01-11-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DOE78_18475 0264631b57cd2d77c3789969ac8313be 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 504 575 6.7E-21 T 01-11-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DOE78_17280 20bdb41f5d9c528837009f2327e38f40 138 Gene3D G3DSA:1.10.10.10 1 83 2.6E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17280 20bdb41f5d9c528837009f2327e38f40 138 SUPERFAMILY SSF46785 5 134 9.07E-35 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_17280 20bdb41f5d9c528837009f2327e38f40 138 Gene3D G3DSA:3.30.1490.190 87 138 9.3E-15 T 01-11-2018 DOE78_17280 20bdb41f5d9c528837009f2327e38f40 138 Pfam PF01475 Ferric uptake regulator family 13 129 4.3E-29 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DOE78_15395 4b0b72c2429eb58bac87953bb881f8f7 110 Pfam PF04397 LytTr DNA-binding domain 1 92 1.2E-19 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_15395 4b0b72c2429eb58bac87953bb881f8f7 110 Gene3D G3DSA:2.40.50.1020 1 90 3.4E-16 T 01-11-2018 DOE78_15395 4b0b72c2429eb58bac87953bb881f8f7 110 SMART SM00850 1 95 1.7E-16 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_18985 1bbf2ef78bf2aabc22cd53a9a9ff0e70 247 Pfam PF14014 Protein of unknown function (DUF4230) 109 231 1.7E-10 T 01-11-2018 IPR025324 Protein of unknown function DUF4230 DOE78_02980 a76705e03e2927302a655bc574c2ae91 690 Gene3D G3DSA:3.40.710.10 316 668 1.2E-220 T 01-11-2018 DOE78_02980 a76705e03e2927302a655bc574c2ae91 690 SUPERFAMILY SSF56519 55 316 5.62E-31 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_02980 a76705e03e2927302a655bc574c2ae91 690 Gene3D G3DSA:1.10.10.1230 86 191 1.2E-220 T 01-11-2018 DOE78_02980 a76705e03e2927302a655bc574c2ae91 690 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 302 2.0E-33 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_02980 a76705e03e2927302a655bc574c2ae91 690 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 672 5.6E-61 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_02980 a76705e03e2927302a655bc574c2ae91 690 Gene3D G3DSA:3.90.1310.30 61 573 1.2E-220 T 01-11-2018 DOE78_02980 a76705e03e2927302a655bc574c2ae91 690 SUPERFAMILY SSF56601 268 688 3.62E-64 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_21880 44d1c4e48048f6d710722f9b92d075d2 132 Gene3D G3DSA:3.30.720.100 6 71 4.4E-31 T 01-11-2018 DOE78_21880 44d1c4e48048f6d710722f9b92d075d2 132 PIRSF PIRSF021700 1 132 9.3E-42 T 01-11-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase DOE78_21880 44d1c4e48048f6d710722f9b92d075d2 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 128 1.6E-39 T 01-11-2018 IPR028973 PhnB-like DOE78_21880 44d1c4e48048f6d710722f9b92d075d2 132 Gene3D G3DSA:3.30.720.110 72 132 1.4E-30 T 01-11-2018 DOE78_21880 44d1c4e48048f6d710722f9b92d075d2 132 SUPERFAMILY SSF54593 1 131 7.6E-38 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_04100 fdcafa8ebb12c48b9156c1a3792e04c0 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.6E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_04100 fdcafa8ebb12c48b9156c1a3792e04c0 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.6E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_04100 fdcafa8ebb12c48b9156c1a3792e04c0 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.6E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_04100 fdcafa8ebb12c48b9156c1a3792e04c0 149 SMART SM00347 31 129 3.5E-24 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_04100 fdcafa8ebb12c48b9156c1a3792e04c0 149 Gene3D G3DSA:1.10.10.10 2 145 3.8E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04100 fdcafa8ebb12c48b9156c1a3792e04c0 149 SUPERFAMILY SSF46785 9 141 2.6E-35 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04100 fdcafa8ebb12c48b9156c1a3792e04c0 149 Pfam PF01047 MarR family 38 96 1.8E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 Gene3D G3DSA:1.20.1050.90 119 311 4.9E-109 T 01-11-2018 DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 01-11-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 Gene3D G3DSA:3.40.50.300 6 345 4.9E-109 T 01-11-2018 DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 372 103.043 T 01-11-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 346 2.6E-17 T 01-11-2018 IPR003395 RecF/RecN/SMC, N-terminal DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 SUPERFAMILY SSF52540 1 351 1.37E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 368 7.6E-132 T 01-11-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DOE78_00020 cf1bb50f6a662b6abf8fe49b2e574f14 372 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 01-11-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DOE78_23155 9436a147b79ce1609b213b8e4efcb45d 232 Pfam PF08241 Methyltransferase domain 41 143 4.5E-15 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 DOE78_23155 9436a147b79ce1609b213b8e4efcb45d 232 SUPERFAMILY SSF53335 33 215 3.75E-28 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_23155 9436a147b79ce1609b213b8e4efcb45d 232 Gene3D G3DSA:3.40.50.150 12 191 1.8E-27 T 01-11-2018 DOE78_15260 c11f858e86dcb8dac2b59b631eda38e5 192 Gene3D G3DSA:3.40.630.30 1 181 3.0E-22 T 01-11-2018 DOE78_15260 c11f858e86dcb8dac2b59b631eda38e5 192 SUPERFAMILY SSF55729 4 158 7.97E-22 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_15260 c11f858e86dcb8dac2b59b631eda38e5 192 Pfam PF13302 Acetyltransferase (GNAT) domain 6 132 5.1E-15 T 01-11-2018 IPR000182 GNAT domain DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 32.608 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 SUPERFAMILY SSF50104 2 113 1.0E-47 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 2.6E-51 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 Pfam PF01245 Ribosomal protein L19 4 112 4.1E-53 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 Gene3D G3DSA:2.30.30.790 2 114 2.4E-14 T 01-11-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 PIRSF PIRSF002191 1 114 5.6E-51 T 01-11-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_08075 2db4b94a505e9c41cfca100774ce2444 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 01-11-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17460 4a31c06a05d0b95da5e76964b980f5ec 223 SMART SM01133 4 216 1.8E-105 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DOE78_17460 4a31c06a05d0b95da5e76964b980f5ec 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 214 2.9E-93 T 01-11-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DOE78_17460 4a31c06a05d0b95da5e76964b980f5ec 223 SUPERFAMILY SSF51569 2 217 3.77E-86 T 01-11-2018 DOE78_17460 4a31c06a05d0b95da5e76964b980f5ec 223 PIRSF PIRSF001357 1 221 3.4E-80 T 01-11-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DOE78_17460 4a31c06a05d0b95da5e76964b980f5ec 223 Pfam PF01791 DeoC/LacD family aldolase 7 213 5.6E-19 T 01-11-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DOE78_17460 4a31c06a05d0b95da5e76964b980f5ec 223 Gene3D G3DSA:3.20.20.70 1 220 1.2E-100 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_17460 4a31c06a05d0b95da5e76964b980f5ec 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 218 38.039 T 01-11-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 SUPERFAMILY SSF46785 2 72 2.99E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 270 1.3E-125 T 01-11-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 Pfam PF09182 Bacterial purine repressor, N-terminal 4 72 1.2E-31 T 01-11-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 Gene3D G3DSA:1.10.10.10 1 72 6.9E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 Gene3D G3DSA:3.40.50.2020 74 274 5.1E-61 T 01-11-2018 DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 Pfam PF00156 Phosphoribosyl transferase domain 108 263 6.3E-25 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 9 74 1.0E-22 T 01-11-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 DOE78_00290 aa29da1b5a0ae1b82fb152863920a42c 278 SUPERFAMILY SSF53271 91 257 3.55E-40 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_04095 3f48d6ec78cc421340afe0983aeb89d7 141 Pfam PF02566 OsmC-like protein 44 138 4.2E-18 T 01-11-2018 IPR003718 OsmC/Ohr family DOE78_04095 3f48d6ec78cc421340afe0983aeb89d7 141 Gene3D G3DSA:2.20.25.10 3 41 1.9E-12 T 01-11-2018 DOE78_04095 3f48d6ec78cc421340afe0983aeb89d7 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 138 3.1E-48 T 01-11-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DOE78_04095 3f48d6ec78cc421340afe0983aeb89d7 141 SUPERFAMILY SSF82784 5 139 1.7E-34 T 01-11-2018 IPR036102 OsmC/Ohr superfamily DOE78_04095 3f48d6ec78cc421340afe0983aeb89d7 141 Gene3D G3DSA:3.30.300.20 47 140 1.2E-33 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_08005 a2d5cb511716f8511a7f21eefa6dd671 333 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 330 2.3E-132 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DOE78_08005 a2d5cb511716f8511a7f21eefa6dd671 333 PIRSF PIRSF002465 1 332 8.0E-129 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DOE78_08005 a2d5cb511716f8511a7f21eefa6dd671 333 Gene3D G3DSA:3.40.718.10 1 333 1.0E-139 T 01-11-2018 DOE78_08005 a2d5cb511716f8511a7f21eefa6dd671 333 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 152.332 T 01-11-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DOE78_08005 a2d5cb511716f8511a7f21eefa6dd671 333 SUPERFAMILY SSF53659 1 328 8.22E-104 T 01-11-2018 DOE78_08005 a2d5cb511716f8511a7f21eefa6dd671 333 Pfam PF02504 Fatty acid synthesis protein 1 317 2.1E-123 T 01-11-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DOE78_05940 42a619504551a2471ec4ff7519f9f230 38 Pfam PF13215 Protein of unknown function (DUF4023) 1 37 8.6E-14 T 01-11-2018 IPR025097 Protein of unknown function DUF4023 DOE78_24665 f2a21124673d0038f100616ce6eae310 297 Gene3D G3DSA:2.30.30.60 135 183 2.4E-24 T 01-11-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE78_24665 f2a21124673d0038f100616ce6eae310 297 SUPERFAMILY SSF82861 35 118 4.05E-15 T 01-11-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DOE78_24665 f2a21124673d0038f100616ce6eae310 297 SUPERFAMILY SSF50182 120 182 1.37E-16 T 01-11-2018 IPR010920 LSM domain superfamily DOE78_24665 f2a21124673d0038f100616ce6eae310 297 Pfam PF00924 Mechanosensitive ion channel 76 274 6.7E-50 T 01-11-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DOE78_24665 f2a21124673d0038f100616ce6eae310 297 SUPERFAMILY SSF82689 186 285 1.44E-17 T 01-11-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DOE78_24665 f2a21124673d0038f100616ce6eae310 297 Gene3D G3DSA:3.30.70.100 185 272 3.0E-25 T 01-11-2018 DOE78_05980 b2b2b59405ddc752c713fb1a133420df 108 PIRSF PIRSF000699 1 105 6.3E-40 T 01-11-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DOE78_05980 b2b2b59405ddc752c713fb1a133420df 108 SUPERFAMILY SSF46973 2 99 5.89E-38 T 01-11-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DOE78_05980 b2b2b59405ddc752c713fb1a133420df 108 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 1.8E-38 T 01-11-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DOE78_05980 b2b2b59405ddc752c713fb1a133420df 108 Gene3D G3DSA:1.20.58.280 1 104 2.5E-41 T 01-11-2018 DOE78_10645 d988c1d00ec891f6d56a2bbb46a63cbc 480 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 32 6.1E-6 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE78_10645 d988c1d00ec891f6d56a2bbb46a63cbc 480 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 3.5E-5 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE78_10645 d988c1d00ec891f6d56a2bbb46a63cbc 480 SUPERFAMILY SSF75011 182 449 2.48E-9 T 01-11-2018 DOE78_10645 d988c1d00ec891f6d56a2bbb46a63cbc 480 Pfam PF05787 Bacterial protein of unknown function (DUF839) 54 144 7.4E-12 T 01-11-2018 IPR008557 Protein of unknown function DUF839 DOE78_10645 d988c1d00ec891f6d56a2bbb46a63cbc 480 Pfam PF05787 Bacterial protein of unknown function (DUF839) 150 419 5.5E-54 T 01-11-2018 IPR008557 Protein of unknown function DUF839 DOE78_01115 1c4dd7174de6535e0545254225095d40 364 Pfam PF03845 Spore germination protein 3 313 3.4E-39 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_01115 1c4dd7174de6535e0545254225095d40 364 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 3 348 2.8E-44 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_09500 d841091528eb584eee01d49e23794e19 540 SUPERFAMILY SSF51905 315 532 1.1E-24 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09500 d841091528eb584eee01d49e23794e19 540 Gene3D G3DSA:3.50.50.60 2 275 1.3E-67 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09500 d841091528eb584eee01d49e23794e19 540 Pfam PF00743 Flavin-binding monooxygenase-like 10 208 1.6E-19 T 01-11-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 DOE78_09500 d841091528eb584eee01d49e23794e19 540 SUPERFAMILY SSF51905 4 394 1.19E-53 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09500 d841091528eb584eee01d49e23794e19 540 Gene3D G3DSA:3.50.50.60 329 539 6.5E-62 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 Pfam PF02743 Cache domain 49 300 1.6E-17 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 Gene3D G3DSA:3.30.450.20 190 315 4.5E-10 T 01-11-2018 DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 Gene3D G3DSA:3.30.565.10 457 619 4.3E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 SUPERFAMILY SSF55874 458 609 1.1E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 501 610 1.7E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 SMART SM00304 339 391 0.005 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 Pfam PF06580 Histidine kinase 404 482 6.2E-23 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 SUPERFAMILY SSF158472 341 389 2.35E-6 T 01-11-2018 DOE78_08805 cebfa20fc447ba45d4b2d3ce80b9f900 621 Gene3D G3DSA:1.10.8.500 338 389 1.0E-5 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 SUPERFAMILY SSF82866 137 411 4.58E-38 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Gene3D G3DSA:1.20.1640.10 426 474 1.4E-14 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Gene3D G3DSA:3.30.70.1320 237 246 1.4E-14 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Pfam PF07549 SecD/SecF GG Motif 472 496 2.5E-6 T 01-11-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 477 721 1.8E-71 T 01-11-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 SUPERFAMILY SSF82866 544 731 2.88E-35 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Gene3D G3DSA:1.20.1640.10 250 425 1.4E-14 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Pfam PF02355 Protein export membrane protein 243 407 1.3E-10 T 01-11-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Pfam PF02355 Protein export membrane protein 552 730 6.0E-64 T 01-11-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Gene3D G3DSA:3.30.70.3400 34 122 2.7E-23 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 PRINTS PR01755 Bacterial translocase SecF protein signature 585 599 1.8E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 PRINTS PR01755 Bacterial translocase SecF protein signature 633 651 1.8E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 PRINTS PR01755 Bacterial translocase SecF protein signature 669 684 1.8E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 PRINTS PR01755 Bacterial translocase SecF protein signature 475 490 1.8E-26 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Gene3D G3DSA:1.20.1640.10 551 751 8.1E-7 T 01-11-2018 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 420 33.673 T 01-11-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 448 732 25.338 T 01-11-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 556 718 7.3E-50 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 193 399 1.1E-52 T 01-11-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DOE78_17805 b28d25031aa380230f9b340dde61e4c8 754 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 406 8.1E-104 T 01-11-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DOE78_22595 131ca5801e278838f01830b98dd330ba 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 150 4.5E-39 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_22595 131ca5801e278838f01830b98dd330ba 154 SUPERFAMILY SSF55804 6 150 4.97E-40 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_22595 131ca5801e278838f01830b98dd330ba 154 Gene3D G3DSA:3.40.930.10 1 154 1.0E-48 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 Gene3D G3DSA:3.40.50.300 12 180 1.7E-47 T 01-11-2018 DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 SUPERFAMILY SSF52540 9 257 2.05E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 170 185 1.9E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 124 144 1.9E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 PIRSF PIRSF006230 1 284 3.8E-104 T 01-11-2018 IPR016478 GTPase, MTG1 DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 Pfam PF01926 50S ribosome-binding GTPase 124 214 5.7E-18 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 279 1.4E-115 T 01-11-2018 IPR019991 GTP-binding protein, ribosome biogenesis DOE78_08085 a3a1557567a3115c7a11d1ed71873824 291 Gene3D G3DSA:1.10.1580.10 181 271 3.8E-31 T 01-11-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 SUPERFAMILY SSF51261 27 161 1.1E-45 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 SMART SM00257 221 264 1.5E-13 T 01-11-2018 IPR018392 LysM domain DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 SMART SM00257 270 313 1.7E-8 T 01-11-2018 IPR018392 LysM domain DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 SUPERFAMILY SSF54106 270 312 6.8E-9 T 01-11-2018 DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 Gene3D G3DSA:3.10.350.10 210 269 8.0E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 Gene3D G3DSA:2.70.70.10 24 163 8.1E-40 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 SUPERFAMILY SSF54106 220 263 2.88E-10 T 01-11-2018 DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 Pfam PF01551 Peptidase family M23 59 152 1.3E-30 T 01-11-2018 IPR016047 Peptidase M23 DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 Gene3D G3DSA:3.10.350.10 270 313 2.0E-11 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 Pfam PF01476 LysM domain 222 263 2.9E-14 T 01-11-2018 IPR018392 LysM domain DOE78_16295 b3b5d6463b368a7e5833d39b07a988e0 313 Pfam PF01476 LysM domain 271 311 3.7E-9 T 01-11-2018 IPR018392 LysM domain DOE78_13755 1c00b07615e456cbad489b83a45ebd4f 158 SUPERFAMILY SSF109854 3 136 3.66E-29 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_13755 1c00b07615e456cbad489b83a45ebd4f 158 Pfam PF05163 DinB family 3 147 3.9E-27 T 01-11-2018 IPR007837 DNA damage-inducible protein DinB DOE78_13755 1c00b07615e456cbad489b83a45ebd4f 158 Gene3D G3DSA:1.20.120.450 1 158 3.3E-45 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 Pfam PF01842 ACT domain 4 68 3.6E-14 T 01-11-2018 IPR002912 ACT domain DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 SUPERFAMILY SSF55021 2 77 6.57E-21 T 01-11-2018 DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 4.4E-64 T 01-11-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 Pfam PF10369 Small subunit of acetolactate synthase 85 158 4.3E-28 T 01-11-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 Gene3D G3DSA:3.30.70.1150 84 166 1.0E-28 T 01-11-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 Gene3D G3DSA:3.30.70.260 1 80 5.3E-31 T 01-11-2018 DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 4.0E-26 T 01-11-2018 DOE78_18125 060b565720a8780d18188a3eed45d7f7 172 SUPERFAMILY SSF55021 80 160 2.44E-26 T 01-11-2018 DOE78_07680 3587862e2414b07706b0906369b6977a 310 Gene3D G3DSA:3.40.50.150 4 308 2.6E-106 T 01-11-2018 DOE78_07680 3587862e2414b07706b0906369b6977a 310 Pfam PF01795 MraW methylase family 2 309 2.3E-135 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DOE78_07680 3587862e2414b07706b0906369b6977a 310 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 1.4E-129 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DOE78_07680 3587862e2414b07706b0906369b6977a 310 Gene3D G3DSA:1.10.150.170 111 215 2.6E-106 T 01-11-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DOE78_07680 3587862e2414b07706b0906369b6977a 310 SUPERFAMILY SSF81799 113 214 2.62E-36 T 01-11-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DOE78_07680 3587862e2414b07706b0906369b6977a 310 PIRSF PIRSF004486 1 310 2.2E-110 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DOE78_07680 3587862e2414b07706b0906369b6977a 310 SUPERFAMILY SSF53335 4 310 1.17E-46 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_07680 3587862e2414b07706b0906369b6977a 310 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.559 T 01-11-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DOE78_02365 ecacb4cc150e2fd713a01ce6851d2571 419 Pfam PF07690 Major Facilitator Superfamily 17 367 3.7E-43 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_02365 ecacb4cc150e2fd713a01ce6851d2571 419 Gene3D G3DSA:1.20.1250.20 211 418 1.7E-27 T 01-11-2018 DOE78_02365 ecacb4cc150e2fd713a01ce6851d2571 419 Gene3D G3DSA:1.20.1250.20 1 203 9.6E-35 T 01-11-2018 DOE78_02365 ecacb4cc150e2fd713a01ce6851d2571 419 SUPERFAMILY SSF103473 6 414 2.22E-67 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_09120 c196467e9db9c8e81a20d64e1f553f55 445 Pfam PF05525 Branched-chain amino acid transport protein 11 442 1.6E-153 T 01-11-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DOE78_09120 c196467e9db9c8e81a20d64e1f553f55 445 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 429 5.5E-138 T 01-11-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DOE78_13190 791c6005403ff10b42f00e279e71260b 83 Pfam PF16079 Phage holin family Hol44, in holin superfamily V 14 79 3.6E-13 T 01-11-2018 IPR032111 Clostridium phage holin DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 PIRSF PIRSF000521 106 141 4.1E-4 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 PIRSF PIRSF000521 8 113 2.2E-6 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 PIRSF PIRSF000521 154 380 8.3E-38 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 204 241 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 Gene3D G3DSA:3.40.640.10 47 286 6.1E-136 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 380 65.88 T 01-11-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 Pfam PF00202 Aminotransferase class-III 14 377 4.3E-118 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 377 1.5E-141 T 01-11-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 Gene3D G3DSA:3.90.1150.10 14 370 6.1E-136 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_06480 3b8a7439c373d751abd1eace670e90b7 384 SUPERFAMILY SSF53383 5 378 5.11E-122 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_12195 badd3f270078f96d516cc69ae2110509 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 128 2.3E-18 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_12195 badd3f270078f96d516cc69ae2110509 354 Gene3D G3DSA:3.40.50.720 4 137 1.8E-30 T 01-11-2018 DOE78_12195 badd3f270078f96d516cc69ae2110509 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 140 211 9.8E-9 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_12195 badd3f270078f96d516cc69ae2110509 354 Gene3D G3DSA:3.30.360.10 138 353 6.8E-56 T 01-11-2018 DOE78_12195 badd3f270078f96d516cc69ae2110509 354 SUPERFAMILY SSF55347 134 303 1.23E-38 T 01-11-2018 DOE78_12195 badd3f270078f96d516cc69ae2110509 354 SUPERFAMILY SSF51735 4 160 4.14E-41 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13080 f32c6d3d2976bc436d4987d7ba00273a 177 SUPERFAMILY SSF46785 7 115 7.66E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_13080 f32c6d3d2976bc436d4987d7ba00273a 177 Gene3D G3DSA:1.20.1270.400 85 174 1.9E-28 T 01-11-2018 DOE78_13080 f32c6d3d2976bc436d4987d7ba00273a 177 Pfam PF12840 Helix-turn-helix domain 6 61 3.8E-11 T 01-11-2018 DOE78_13080 f32c6d3d2976bc436d4987d7ba00273a 177 Gene3D G3DSA:1.10.10.10 1 78 2.6E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 493 509 8.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 478 493 8.6E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 SMART SM00342 426 509 1.2E-28 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 SUPERFAMILY SSF46689 410 460 1.7E-10 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 SUPERFAMILY SSF52172 1 136 7.97E-31 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 463 505 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 Gene3D G3DSA:1.10.10.60 408 463 5.3E-20 T 01-11-2018 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 Pfam PF12833 Helix-turn-helix domain 433 510 2.5E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 Pfam PF00072 Response regulator receiver domain 4 116 5.5E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 SUPERFAMILY SSF46689 462 513 5.82E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 Gene3D G3DSA:1.10.10.2730 464 510 2.6E-18 T 01-11-2018 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 Gene3D G3DSA:3.40.50.2300 2 151 5.8E-32 T 01-11-2018 DOE78_13620 e5c62990ed7ae5a3cd6ffa1f41d8a3a9 518 SMART SM00448 2 117 5.9E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 Pfam PF08544 GHMP kinases C terminal 204 280 1.1E-11 T 01-11-2018 IPR013750 GHMP kinase, C-terminal domain DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 TIGRFAM TIGR00191 thrB: homoserine kinase 9 299 6.6E-79 T 01-11-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 Gene3D G3DSA:3.30.70.890 164 288 6.6E-34 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 SUPERFAMILY SSF55060 164 283 5.94E-33 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 89 100 - T 01-11-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 SUPERFAMILY SSF54211 7 153 3.49E-30 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 Hamap MF_00384 Homoserine kinase [thrB]. 9 298 28.639 T 01-11-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 PRINTS PR00958 Homoserine kinase signature 14 29 1.2E-34 T 01-11-2018 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 PRINTS PR00958 Homoserine kinase signature 248 263 1.2E-34 T 01-11-2018 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 PRINTS PR00958 Homoserine kinase signature 96 111 1.2E-34 T 01-11-2018 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 PRINTS PR00958 Homoserine kinase signature 130 143 1.2E-34 T 01-11-2018 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 PRINTS PR00958 Homoserine kinase signature 168 185 1.2E-34 T 01-11-2018 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 Pfam PF00288 GHMP kinases N terminal domain 83 143 1.8E-11 T 01-11-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 PIRSF PIRSF000676 5 300 7.4E-87 T 01-11-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DOE78_21015 7a543bdc66eeef8dd87ed222a50c6728 306 Gene3D G3DSA:3.30.230.10 7 163 1.5E-45 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 501 1.6E-143 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 Gene3D G3DSA:1.20.210.10 30 560 5.1E-197 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 1.9E-97 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 SUPERFAMILY SSF81442 44 553 4.45E-178 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14965 3f9868b4f20753476e92eceaaaf808d9 658 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 644 0.0 T 01-11-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 DOE78_15330 cf5da86d34db56dddf49413f05b4f552 304 SMART SM00833 218 303 6.3E-11 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE78_15330 cf5da86d34db56dddf49413f05b4f552 304 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 219 301 3.1E-12 T 01-11-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DOE78_15330 cf5da86d34db56dddf49413f05b4f552 304 Gene3D G3DSA:3.40.50.300 1 198 3.1E-50 T 01-11-2018 DOE78_15330 cf5da86d34db56dddf49413f05b4f552 304 SUPERFAMILY SSF52540 3 169 3.23E-26 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15330 cf5da86d34db56dddf49413f05b4f552 304 SUPERFAMILY SSF90002 219 300 2.48E-9 T 01-11-2018 DOE78_15330 cf5da86d34db56dddf49413f05b4f552 304 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 184 4.0E-43 T 01-11-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DOE78_15330 cf5da86d34db56dddf49413f05b4f552 304 Gene3D G3DSA:3.30.1220.10 199 304 7.7E-6 T 01-11-2018 IPR036627 CobW-like, C-terminal domain superfamily DOE78_13375 2af5c8a3a84bbc214cfa573befc7a5b7 172 SUPERFAMILY SSF81330 13 129 1.09E-25 T 01-11-2018 IPR036019 Gated mechanosensitive channel DOE78_13375 2af5c8a3a84bbc214cfa573befc7a5b7 172 Gene3D G3DSA:1.10.1200.120 3 130 1.4E-28 T 01-11-2018 IPR036019 Gated mechanosensitive channel DOE78_13375 2af5c8a3a84bbc214cfa573befc7a5b7 172 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 109 1.5E-29 T 01-11-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DOE78_13375 2af5c8a3a84bbc214cfa573befc7a5b7 172 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 138 19.033 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DOE78_13375 2af5c8a3a84bbc214cfa573befc7a5b7 172 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 110 1.4E-27 T 01-11-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DOE78_01950 1a484b4f77427fc102cb332256e1e1e4 427 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 6 246 4.0E-108 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DOE78_01950 1a484b4f77427fc102cb332256e1e1e4 427 Pfam PF00463 Isocitrate lyase family 248 423 6.5E-49 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DOE78_01950 1a484b4f77427fc102cb332256e1e1e4 427 Pfam PF00463 Isocitrate lyase family 7 247 3.0E-58 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DOE78_01950 1a484b4f77427fc102cb332256e1e1e4 427 SUPERFAMILY SSF51621 4 423 5.38E-159 T 01-11-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DOE78_01950 1a484b4f77427fc102cb332256e1e1e4 427 PIRSF PIRSF001362 1 426 1.1E-243 T 01-11-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DOE78_01950 1a484b4f77427fc102cb332256e1e1e4 427 Gene3D G3DSA:3.20.20.60 5 406 9.3E-174 T 01-11-2018 DOE78_01950 1a484b4f77427fc102cb332256e1e1e4 427 ProSitePatterns PS00161 Isocitrate lyase signature. 184 189 - T 01-11-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 DOE78_21665 3d226d4ef40e40c65ad3bfad18635506 168 SMART SM00014 52 159 3.7E-14 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE78_21665 3d226d4ef40e40c65ad3bfad18635506 168 SUPERFAMILY SSF48317 3 160 2.88E-30 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE78_21665 3d226d4ef40e40c65ad3bfad18635506 168 Gene3D G3DSA:1.20.144.10 83 168 1.8E-12 T 01-11-2018 DOE78_21665 3d226d4ef40e40c65ad3bfad18635506 168 Pfam PF01569 PAP2 superfamily 55 158 2.7E-17 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE78_18520 cf7c91dd4c7c49cbc8e4611a52b72230 310 Pfam PF02272 DHHA1 domain 177 308 2.5E-14 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DOE78_18520 cf7c91dd4c7c49cbc8e4611a52b72230 310 Gene3D G3DSA:3.10.310.30 199 310 1.6E-35 T 01-11-2018 DOE78_18520 cf7c91dd4c7c49cbc8e4611a52b72230 310 SUPERFAMILY SSF64182 12 303 2.35E-74 T 01-11-2018 IPR038763 DHH phosphoesterase superfamily DOE78_18520 cf7c91dd4c7c49cbc8e4611a52b72230 310 Pfam PF01368 DHH family 15 153 2.5E-12 T 01-11-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_18520 cf7c91dd4c7c49cbc8e4611a52b72230 310 Gene3D G3DSA:3.90.1640.10 1 194 6.6E-60 T 01-11-2018 DOE78_18030 37e32074f62e21dbaf052cd34bc11dc3 385 SMART SM00257 335 379 1.8E-8 T 01-11-2018 IPR018392 LysM domain DOE78_18030 37e32074f62e21dbaf052cd34bc11dc3 385 Pfam PF01476 LysM domain 337 379 4.0E-9 T 01-11-2018 IPR018392 LysM domain DOE78_18030 37e32074f62e21dbaf052cd34bc11dc3 385 Gene3D G3DSA:3.10.350.10 325 384 1.2E-12 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_18030 37e32074f62e21dbaf052cd34bc11dc3 385 SUPERFAMILY SSF54106 335 380 2.09E-8 T 01-11-2018 DOE78_18030 37e32074f62e21dbaf052cd34bc11dc3 385 TIGRFAM TIGR02907 spore_VI_D: stage VI sporulation protein D 9 379 2.4E-75 T 01-11-2018 IPR014256 Sporulation stage VI, protein D DOE78_23900 871be18423bc814c768c6d9f35ea1f89 356 Pfam PF00581 Rhodanese-like domain 11 128 9.8E-11 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_23900 871be18423bc814c768c6d9f35ea1f89 356 SUPERFAMILY SSF52540 142 257 2.41E-8 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23900 871be18423bc814c768c6d9f35ea1f89 356 Gene3D G3DSA:3.40.50.300 141 355 1.6E-7 T 01-11-2018 DOE78_23900 871be18423bc814c768c6d9f35ea1f89 356 SMART SM00450 3 132 2.6E-16 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_23900 871be18423bc814c768c6d9f35ea1f89 356 SUPERFAMILY SSF52821 10 134 3.8E-24 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_23900 871be18423bc814c768c6d9f35ea1f89 356 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 322 1.5E-95 T 01-11-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 DOE78_23900 871be18423bc814c768c6d9f35ea1f89 356 Gene3D G3DSA:3.40.250.10 3 133 2.3E-43 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_22205 519d76c772e459d53b48335debb63cf0 217 Gene3D G3DSA:3.40.50.1000 8 187 2.0E-51 T 01-11-2018 IPR023214 HAD superfamily DOE78_22205 519d76c772e459d53b48335debb63cf0 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 3.9E-54 T 01-11-2018 DOE78_22205 519d76c772e459d53b48335debb63cf0 217 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 3 216 44.113 T 01-11-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_22205 519d76c772e459d53b48335debb63cf0 217 Gene3D G3DSA:1.10.150.240 20 82 2.0E-51 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE78_22205 519d76c772e459d53b48335debb63cf0 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 177 8.4E-11 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_22205 519d76c772e459d53b48335debb63cf0 217 SUPERFAMILY SSF56784 4 213 2.0E-59 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_22205 519d76c772e459d53b48335debb63cf0 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 4.1E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_22205 519d76c772e459d53b48335debb63cf0 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 4.1E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_22205 519d76c772e459d53b48335debb63cf0 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 4.1E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_22205 519d76c772e459d53b48335debb63cf0 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 4.1E-10 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_22345 000d0df4fa1935e2ea662fabbe30469f 181 Pfam PF00857 Isochorismatase family 5 176 3.4E-36 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 DOE78_22345 000d0df4fa1935e2ea662fabbe30469f 181 Gene3D G3DSA:3.40.50.850 3 181 6.8E-49 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DOE78_22345 000d0df4fa1935e2ea662fabbe30469f 181 SUPERFAMILY SSF52499 2 175 1.27E-47 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DOE78_21375 b8100a7135a48e1c7926f542be28ecf2 320 Pfam PF03060 Nitronate monooxygenase 74 313 5.5E-49 T 01-11-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DOE78_21375 b8100a7135a48e1c7926f542be28ecf2 320 SUPERFAMILY SSF51412 13 316 3.05E-65 T 01-11-2018 DOE78_21375 b8100a7135a48e1c7926f542be28ecf2 320 Gene3D G3DSA:3.20.20.70 13 320 9.7E-91 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_03705 8f4ddec7280bb6d5ec7b2a97dc6339ce 382 SUPERFAMILY SSF110738 1 374 2.09E-145 T 01-11-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 DOE78_03705 8f4ddec7280bb6d5ec7b2a97dc6339ce 382 Gene3D G3DSA:3.90.1510.10 42 276 1.7E-144 T 01-11-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 DOE78_03705 8f4ddec7280bb6d5ec7b2a97dc6339ce 382 PIRSF PIRSF006078 1 377 3.1E-147 T 01-11-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DOE78_03705 8f4ddec7280bb6d5ec7b2a97dc6339ce 382 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.4E-166 T 01-11-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DOE78_03705 8f4ddec7280bb6d5ec7b2a97dc6339ce 382 Pfam PF02595 Glycerate kinase family 3 372 9.9E-153 T 01-11-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DOE78_03705 8f4ddec7280bb6d5ec7b2a97dc6339ce 382 Gene3D G3DSA:3.40.50.10350 2 358 1.7E-144 T 01-11-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold DOE78_00575 3590cd13bc539a1e3ca89e1215d9e07b 363 Pfam PF01938 TRAM domain 294 347 3.9E-5 T 01-11-2018 IPR002792 TRAM domain DOE78_00575 3590cd13bc539a1e3ca89e1215d9e07b 363 SMART SM00670 163 270 1.2E-14 T 01-11-2018 IPR002716 PIN domain DOE78_00575 3590cd13bc539a1e3ca89e1215d9e07b 363 Gene3D G3DSA:3.40.50.1010 158 294 9.5E-53 T 01-11-2018 DOE78_00575 3590cd13bc539a1e3ca89e1215d9e07b 363 SUPERFAMILY SSF88723 165 291 1.22E-23 T 01-11-2018 IPR029060 PIN-like domain superfamily DOE78_10270 749191b6a58c4bf2b0016e88211d7907 258 SMART SM00382 41 223 2.9E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_10270 749191b6a58c4bf2b0016e88211d7907 258 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_10270 749191b6a58c4bf2b0016e88211d7907 258 Gene3D G3DSA:3.40.50.300 13 233 1.3E-59 T 01-11-2018 DOE78_10270 749191b6a58c4bf2b0016e88211d7907 258 Pfam PF00005 ABC transporter 32 173 2.3E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_10270 749191b6a58c4bf2b0016e88211d7907 258 SUPERFAMILY SSF52540 15 234 2.79E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24025 2c29947714143d5dbfd361bc5df1a39a 154 Pfam PF02391 MoaE protein 5 116 2.9E-37 T 01-11-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DOE78_24025 2c29947714143d5dbfd361bc5df1a39a 154 Gene3D G3DSA:3.90.1170.40 1 145 8.2E-54 T 01-11-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DOE78_24025 2c29947714143d5dbfd361bc5df1a39a 154 SUPERFAMILY SSF54690 3 136 6.93E-46 T 01-11-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DOE78_16665 09d474560324234e64d89b494f6c8640 308 SUPERFAMILY SSF56281 1 304 4.33E-85 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_16665 09d474560324234e64d89b494f6c8640 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 304 8.6E-115 T 01-11-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DOE78_16665 09d474560324234e64d89b494f6c8640 308 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 41.136 T 01-11-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DOE78_16665 09d474560324234e64d89b494f6c8640 308 Pfam PF12706 Beta-lactamase superfamily domain 36 150 1.2E-9 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_16665 09d474560324234e64d89b494f6c8640 308 Gene3D G3DSA:3.60.15.10 1 304 1.8E-102 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_04075 e7b1ffd3e139ffa8e496c54b37f4d81f 101 Gene3D G3DSA:1.10.10.10 1 99 6.1E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04075 e7b1ffd3e139ffa8e496c54b37f4d81f 101 SUPERFAMILY SSF46785 4 93 2.98E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04075 e7b1ffd3e139ffa8e496c54b37f4d81f 101 Pfam PF12840 Helix-turn-helix domain 6 78 4.9E-9 T 01-11-2018 DOE78_04075 e7b1ffd3e139ffa8e496c54b37f4d81f 101 SMART SM00418 6 99 1.4E-11 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_08275 b029644aedd671686501e3cc64189d02 287 Gene3D G3DSA:3.40.50.300 20 261 3.0E-55 T 01-11-2018 DOE78_08275 b029644aedd671686501e3cc64189d02 287 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 24 240 4.4E-17 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOE78_08275 b029644aedd671686501e3cc64189d02 287 PIRSF PIRSF003092 1 287 8.9E-80 T 01-11-2018 IPR025501 ATP binding protein MinD DOE78_08275 b029644aedd671686501e3cc64189d02 287 SUPERFAMILY SSF52540 21 265 6.39E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16895 a4475e8759072f60345948f08d06278a 60 SUPERFAMILY SSF54593 2 49 3.89E-9 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_16895 a4475e8759072f60345948f08d06278a 60 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 38 4.2E-7 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_16895 a4475e8759072f60345948f08d06278a 60 Gene3D G3DSA:3.10.180.10 1 58 1.9E-10 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_06920 27f8c0983fe8c46aacb72e2c59114799 97 SUPERFAMILY SSF89957 2 96 6.93E-26 T 01-11-2018 IPR029756 MTH1187/YkoF-like DOE78_06920 27f8c0983fe8c46aacb72e2c59114799 97 Pfam PF01910 Thiamine-binding protein 6 95 1.9E-25 T 01-11-2018 IPR002767 Thiamine-binding protein DOE78_06920 27f8c0983fe8c46aacb72e2c59114799 97 Gene3D G3DSA:3.30.70.930 1 97 1.1E-31 T 01-11-2018 IPR029756 MTH1187/YkoF-like DOE78_07515 db938ad8a261c7167ec43fcf2c29723c 359 Pfam PF01594 AI-2E family transporter 18 350 3.4E-60 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like DOE78_07515 db938ad8a261c7167ec43fcf2c29723c 359 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 17 353 6.0E-99 T 01-11-2018 IPR014227 Putative transport protein YtvI-like DOE78_18095 832b3ef94338888397112ce4e23d19e9 346 Gene3D G3DSA:1.25.40.10 16 126 2.1E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_18095 832b3ef94338888397112ce4e23d19e9 346 SUPERFAMILY SSF48452 16 110 6.01E-13 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_18095 832b3ef94338888397112ce4e23d19e9 346 SUPERFAMILY SSF116965 87 312 5.1E-7 T 01-11-2018 DOE78_18095 832b3ef94338888397112ce4e23d19e9 346 Pfam PF14559 Tetratricopeptide repeat 31 75 3.4E-8 T 01-11-2018 DOE78_03865 5203d1a82f505310a3546537b15aee86 368 Pfam PF14398 YheC/D like ATP-grasp 110 359 1.2E-58 T 01-11-2018 IPR026838 Endospore coat-associated protein YheC/D DOE78_03865 5203d1a82f505310a3546537b15aee86 368 Gene3D G3DSA:3.30.470.20 222 341 6.4E-6 T 01-11-2018 DOE78_03865 5203d1a82f505310a3546537b15aee86 368 SUPERFAMILY SSF56059 131 328 9.09E-11 T 01-11-2018 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 SUPERFAMILY SSF53223 9 161 2.3E-54 T 01-11-2018 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 Pfam PF03949 Malic enzyme, NAD binding domain 165 382 6.8E-24 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 Gene3D G3DSA:3.40.50.720 161 392 2.1E-78 T 01-11-2018 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 01-11-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 Gene3D G3DSA:3.40.50.10380 1 160 6.6E-73 T 01-11-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 PIRSF PIRSF000106 2 396 4.0E-79 T 01-11-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 SMART SM01274 18 151 2.9E-77 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 SUPERFAMILY SSF51735 163 392 1.25E-73 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 SMART SM00919 163 386 7.8E-116 T 01-11-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DOE78_22530 ffa4c28473a5595f0fbc12a47db1a80e 398 Pfam PF00390 Malic enzyme, N-terminal domain 21 151 1.2E-29 T 01-11-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DOE78_00580 b4322bb23cd054576367a780053c45fe 232 SUPERFAMILY SSF53448 3 223 5.18E-61 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_00580 b4322bb23cd054576367a780053c45fe 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 01-11-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DOE78_00580 b4322bb23cd054576367a780053c45fe 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 222 43.709 T 01-11-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DOE78_00580 b4322bb23cd054576367a780053c45fe 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 223 1.4E-76 T 01-11-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DOE78_00580 b4322bb23cd054576367a780053c45fe 232 Gene3D G3DSA:3.90.550.10 1 230 1.1E-81 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_00580 b4322bb23cd054576367a780053c45fe 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 221 2.1E-75 T 01-11-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DOE78_14125 1e2782d85499928997fabf4e8516355c 251 SUPERFAMILY SSF142695 78 221 3.14E-46 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_14125 1e2782d85499928997fabf4e8516355c 251 Gene3D G3DSA:3.40.50.10990 65 221 2.5E-52 T 01-11-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_14125 1e2782d85499928997fabf4e8516355c 251 Pfam PF00925 GTP cyclohydrolase II 79 218 9.3E-47 T 01-11-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DOE78_15630 1e9a26cab09b93862f1c592eab585b94 417 PIRSF PIRSF000524 6 412 8.3E-131 T 01-11-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 DOE78_15630 1e9a26cab09b93862f1c592eab585b94 417 Gene3D G3DSA:3.40.640.10 23 285 8.9E-143 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_15630 1e9a26cab09b93862f1c592eab585b94 417 Gene3D G3DSA:3.90.1150.10 10 387 8.9E-143 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_15630 1e9a26cab09b93862f1c592eab585b94 417 Pfam PF00266 Aminotransferase class-V 37 359 1.8E-29 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_15630 1e9a26cab09b93862f1c592eab585b94 417 SUPERFAMILY SSF53383 10 391 1.17E-95 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_16755 df132a11ab65cf02c3261276825a4b69 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 1.1E-41 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_16755 df132a11ab65cf02c3261276825a4b69 327 Gene3D G3DSA:3.40.50.970 1 192 7.5E-92 T 01-11-2018 DOE78_16755 df132a11ab65cf02c3261276825a4b69 327 Gene3D G3DSA:3.40.50.920 193 327 8.1E-43 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_16755 df132a11ab65cf02c3261276825a4b69 327 SUPERFAMILY SSF52518 2 204 4.12E-73 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_16755 df132a11ab65cf02c3261276825a4b69 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 2.1E-52 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_16755 df132a11ab65cf02c3261276825a4b69 327 SUPERFAMILY SSF52922 188 325 3.14E-40 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_16755 df132a11ab65cf02c3261276825a4b69 327 SMART SM00861 4 179 1.8E-70 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 01-11-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 SUPERFAMILY SSF54768 8 76 1.01E-25 T 01-11-2018 DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 2.8E-31 T 01-11-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 Gene3D G3DSA:3.30.160.20 1 73 1.6E-36 T 01-11-2018 DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 Gene3D G3DSA:3.30.230.10 74 166 2.2E-37 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 SUPERFAMILY SSF54211 80 159 4.05E-26 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 37.535 T 01-11-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 8.4E-34 T 01-11-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DOE78_00810 631c7ce2855905ee53feb1f7454bd09d 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 6.9E-74 T 01-11-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DOE78_14330 4327569652383330fd40b9f230e12143 174 Pfam PF01965 DJ-1/PfpI family 6 169 1.7E-44 T 01-11-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DOE78_14330 4327569652383330fd40b9f230e12143 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 7 171 9.6E-53 T 01-11-2018 IPR006286 Deglycase PfpI DOE78_14330 4327569652383330fd40b9f230e12143 174 Gene3D G3DSA:3.40.50.880 3 174 7.7E-48 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_14330 4327569652383330fd40b9f230e12143 174 SUPERFAMILY SSF52317 5 172 9.17E-47 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 Gene3D G3DSA:3.10.50.10 468 527 6.2E-74 T 01-11-2018 IPR029070 Chitinase insertion domain superfamily DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 Pfam PF07833 Copper amine oxidase N-terminal domain 70 142 1.8E-6 T 01-11-2018 IPR012854 Copper amine oxidase-like, N-terminal DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 Gene3D G3DSA:2.30.30.40 169 238 4.1E-6 T 01-11-2018 DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 SMART SM00636 221 555 1.2E-5 T 01-11-2018 IPR011583 Chitinase II GO:0008061 DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 Pfam PF00704 Glycosyl hydrolases family 18 332 552 1.9E-20 T 01-11-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 Gene3D G3DSA:3.20.20.80 281 551 6.2E-74 T 01-11-2018 DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 SUPERFAMILY SSF51445 279 563 5.02E-38 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_13535 e06f1ae849058fadebcacd7bfc3293a6 573 SUPERFAMILY SSF55383 72 149 2.68E-8 T 01-11-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily DOE78_17615 815cf42431a0bafaff2976a68ab75b0b 597 Gene3D G3DSA:1.10.1370.20 229 597 4.3E-118 T 01-11-2018 DOE78_17615 815cf42431a0bafaff2976a68ab75b0b 597 Pfam PF01432 Peptidase family M3 207 583 5.0E-23 T 01-11-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DOE78_17615 815cf42431a0bafaff2976a68ab75b0b 597 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 11 596 9.5E-205 T 01-11-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 DOE78_17615 815cf42431a0bafaff2976a68ab75b0b 597 SUPERFAMILY SSF55486 50 579 2.2E-98 T 01-11-2018 DOE78_17615 815cf42431a0bafaff2976a68ab75b0b 597 Gene3D G3DSA:1.20.140.70 25 167 4.1E-8 T 01-11-2018 DOE78_17615 815cf42431a0bafaff2976a68ab75b0b 597 Pfam PF08439 Oligopeptidase F 119 184 9.3E-11 T 01-11-2018 IPR013647 Oligopeptidase F, N-terminal domain DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 Pfam PF01632 Ribosomal protein L35 2 62 9.7E-27 T 01-11-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 01-11-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 1.1E-26 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.4E-22 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.4E-22 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.4E-22 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 Gene3D G3DSA:2.40.50.530 1 63 3.0E-22 T 01-11-2018 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.542 T 01-11-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DOE78_18350 af309df8a90b82c4a07dc4504cd4e041 66 SUPERFAMILY SSF143034 2 62 1.19E-22 T 01-11-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_15990 53ce8da4c0b3d90b8e2281094a52130a 290 Gene3D G3DSA:3.30.70.120 194 269 7.6E-28 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_15990 53ce8da4c0b3d90b8e2281094a52130a 290 PIRSF PIRSF006483 2 284 2.1E-96 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_15990 53ce8da4c0b3d90b8e2281094a52130a 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 217 1.4E-66 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_15990 53ce8da4c0b3d90b8e2281094a52130a 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 2.5E-22 T 01-11-2018 IPR019264 Domain of unknown function DUF2179 DOE78_24720 998dc9738282bf107da7574da45ef06f 258 Pfam PF02096 60Kd inner membrane protein 59 240 1.1E-62 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DOE78_24720 998dc9738282bf107da7574da45ef06f 258 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 240 2.2E-68 T 01-11-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_24720 998dc9738282bf107da7574da45ef06f 258 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 245 32.888 T 01-11-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 DOE78_24720 998dc9738282bf107da7574da45ef06f 258 PRINTS PR01900 YidC translocation/secretion protein signature 175 190 1.3E-6 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DOE78_24720 998dc9738282bf107da7574da45ef06f 258 PRINTS PR01900 YidC translocation/secretion protein signature 196 220 1.3E-6 T 01-11-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DOE78_14485 d427df1e27cb78a10cecfd4f4306ebfa 35 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 8 31 7.5E-13 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_14485 d427df1e27cb78a10cecfd4f4306ebfa 35 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 6 31 1.6E-14 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_19035 1eff01ed0469cd683b2c6539eddd037d 160 SUPERFAMILY SSF54060 27 91 1.18E-13 T 01-11-2018 DOE78_19035 1eff01ed0469cd683b2c6539eddd037d 160 Gene3D G3DSA:3.90.75.20 7 96 8.7E-8 T 01-11-2018 DOE78_19035 1eff01ed0469cd683b2c6539eddd037d 160 Gene3D G3DSA:3.30.730.10 97 155 2.9E-7 T 01-11-2018 IPR036955 AP2/ERF domain superfamily GO:0003700|GO:0006355 DOE78_19035 1eff01ed0469cd683b2c6539eddd037d 160 SMART SM00380 98 160 0.0074 T 01-11-2018 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 DOE78_19035 1eff01ed0469cd683b2c6539eddd037d 160 SUPERFAMILY SSF54171 97 153 8.5E-12 T 01-11-2018 IPR016177 DNA-binding domain superfamily GO:0003677 DOE78_19035 1eff01ed0469cd683b2c6539eddd037d 160 Pfam PF13392 HNH endonuclease 56 85 2.6E-9 T 01-11-2018 IPR003615 HNH nuclease DOE78_12775 6fcf44cbcb9363916edcf949ad07661f 410 Pfam PF07690 Major Facilitator Superfamily 19 355 5.4E-43 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_12775 6fcf44cbcb9363916edcf949ad07661f 410 SUPERFAMILY SSF103473 6 394 2.09E-64 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_12775 6fcf44cbcb9363916edcf949ad07661f 410 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 390 5.5E-111 T 01-11-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DOE78_12775 6fcf44cbcb9363916edcf949ad07661f 410 Gene3D G3DSA:1.20.1720.10 12 390 1.2E-98 T 01-11-2018 DOE78_21495 72d6fb92f169da81f26914c92e046115 250 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 2 249 3.7E-95 T 01-11-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DOE78_21495 72d6fb92f169da81f26914c92e046115 250 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 228 8.7E-20 T 01-11-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DOE78_21495 72d6fb92f169da81f26914c92e046115 250 SUPERFAMILY SSF100950 2 248 5.76E-94 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_21495 72d6fb92f169da81f26914c92e046115 250 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 121 139 - T 01-11-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DOE78_21495 72d6fb92f169da81f26914c92e046115 250 Gene3D G3DSA:3.40.50.1360 1 250 2.5E-99 T 01-11-2018 DOE78_21495 72d6fb92f169da81f26914c92e046115 250 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 2 242 42.885 T 01-11-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DOE78_22195 3579ee2996e716ee4e1c95e07dd73ae9 392 Gene3D G3DSA:3.40.50.12590 326 392 1.4E-24 T 01-11-2018 DOE78_22195 3579ee2996e716ee4e1c95e07dd73ae9 392 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 374 32.292 T 01-11-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DOE78_22195 3579ee2996e716ee4e1c95e07dd73ae9 392 SUPERFAMILY SSF55681 9 326 1.51E-64 T 01-11-2018 DOE78_22195 3579ee2996e716ee4e1c95e07dd73ae9 392 PIRSF PIRSF001549 3 390 2.6E-86 T 01-11-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DOE78_22195 3579ee2996e716ee4e1c95e07dd73ae9 392 Pfam PF13393 Histidyl-tRNA synthetase 12 320 1.1E-78 T 01-11-2018 DOE78_22195 3579ee2996e716ee4e1c95e07dd73ae9 392 Gene3D G3DSA:3.30.930.10 2 325 4.0E-103 T 01-11-2018 DOE78_22195 3579ee2996e716ee4e1c95e07dd73ae9 392 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 324 1.4E-98 T 01-11-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DOE78_15130 30f1bb97f44bb925a704544d4f6fe090 66 Pfam PF14169 Cold-inducible protein YdjO 1 58 1.9E-26 T 01-11-2018 IPR025916 Cold-inducible protein YdjO DOE78_04690 30fd4a2db7023757af089d9f266e54f1 317 Pfam PF00294 pfkB family carbohydrate kinase 1 301 4.1E-55 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_04690 30fd4a2db7023757af089d9f266e54f1 317 Gene3D G3DSA:3.40.1190.20 1 313 1.0E-86 T 01-11-2018 IPR029056 Ribokinase-like DOE78_04690 30fd4a2db7023757af089d9f266e54f1 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_04690 30fd4a2db7023757af089d9f266e54f1 317 SUPERFAMILY SSF53613 1 309 6.7E-80 T 01-11-2018 IPR029056 Ribokinase-like DOE78_19095 c38f7a092acda3d2215d1cd6900c23bf 449 Gene3D G3DSA:3.40.50.300 137 439 2.0E-30 T 01-11-2018 DOE78_19095 c38f7a092acda3d2215d1cd6900c23bf 449 SUPERFAMILY SSF52540 163 366 5.91E-11 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19095 c38f7a092acda3d2215d1cd6900c23bf 449 Pfam PF03796 DnaB-like helicase C terminal domain 164 402 2.7E-7 T 01-11-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DOE78_17660 29e2ba7db5e4f1ca2135c02b8a0fe8a9 423 ProSitePatterns PS01276 Peptidase family U32 signature. 180 198 - T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DOE78_17660 29e2ba7db5e4f1ca2135c02b8a0fe8a9 423 Gene3D G3DSA:2.40.30.10 335 423 1.2E-38 T 01-11-2018 DOE78_17660 29e2ba7db5e4f1ca2135c02b8a0fe8a9 423 Pfam PF01136 Peptidase family U32 95 324 2.3E-86 T 01-11-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DOE78_17660 29e2ba7db5e4f1ca2135c02b8a0fe8a9 423 Pfam PF16325 Peptidase family U32 C-terminal domain 340 420 5.3E-27 T 01-11-2018 IPR032525 Peptidase family U32, C-terminal DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 365 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 144 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 425 446 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 312 333 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 242 263 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 180 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 63 86 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 90 114 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 191 210 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 303 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 375 394 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 PRINTS PR01165 Cytochrome c oxidase subunit I signature 16 41 1.9E-102 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 Gene3D G3DSA:1.20.210.10 2 529 2.3E-202 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 SUPERFAMILY SSF81442 14 522 4.71E-176 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 17 520 1.1E-206 T 01-11-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 25 468 3.3E-146 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07485 d8de4aa139a0bd8ad99fa529475c98c8 622 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 244 298 - T 01-11-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 SUPERFAMILY SSF56645 8 229 4.32E-46 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 Gene3D G3DSA:1.10.540.10 7 121 6.4E-25 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 PIRSF PIRSF016578 4 387 5.0E-41 T 01-11-2018 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 Gene3D G3DSA:2.40.110.10 136 232 2.3E-24 T 01-11-2018 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 249 366 3.0E-18 T 01-11-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 Gene3D G3DSA:1.20.140.10 241 384 2.4E-33 T 01-11-2018 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 SUPERFAMILY SSF47203 244 385 1.93E-28 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 100 2.7E-12 T 01-11-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DOE78_24160 10d47b6147c30d95a8fb22147ae004ac 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 221 5.2E-14 T 01-11-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DOE78_13350 a6f2e9dedded7fc2abbf6bec9fd16f91 413 Gene3D G3DSA:1.20.1250.20 16 204 3.5E-12 T 01-11-2018 DOE78_13350 a6f2e9dedded7fc2abbf6bec9fd16f91 413 Pfam PF07690 Major Facilitator Superfamily 20 270 3.1E-11 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_13350 a6f2e9dedded7fc2abbf6bec9fd16f91 413 Gene3D G3DSA:1.20.1250.20 215 409 6.7E-16 T 01-11-2018 DOE78_13350 a6f2e9dedded7fc2abbf6bec9fd16f91 413 SUPERFAMILY SSF103473 20 403 5.49E-38 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 SUPERFAMILY SSF55666 151 247 3.01E-24 T 01-11-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 Pfam PF03725 3' exoribonuclease family, domain 2 159 225 3.3E-11 T 01-11-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 4.7E-23 T 01-11-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 SUPERFAMILY SSF54211 1 182 3.8E-45 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 Gene3D G3DSA:3.30.230.70 1 246 3.1E-61 T 01-11-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 01-11-2018 IPR018336 Ribonuclease PH, conserved site DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 237 2.5E-118 T 01-11-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DOE78_18180 d8186ca9db57791ff23877a41db1ba38 256 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 44.006 T 01-11-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DOE78_23145 7994aeb08c6ec4e05f5996314393468f 333 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 96 328 4.7E-44 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23145 7994aeb08c6ec4e05f5996314393468f 333 Pfam PF04122 Putative cell wall binding repeat 2 2 77 2.6E-12 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23145 7994aeb08c6ec4e05f5996314393468f 333 SMART SM00646 156 328 4.1E-16 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23145 7994aeb08c6ec4e05f5996314393468f 333 Gene3D G3DSA:3.40.630.40 87 333 3.5E-52 T 01-11-2018 DOE78_23145 7994aeb08c6ec4e05f5996314393468f 333 SUPERFAMILY SSF53187 93 331 2.05E-42 T 01-11-2018 DOE78_03700 a92b00bb3ec6bd311bfd9edb9682be5a 422 Pfam PF02447 GntP family permease 12 245 1.4E-20 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DOE78_19085 a0c144a42b3fc051495c97d111af78a8 327 SUPERFAMILY SSF56731 130 297 2.62E-16 T 01-11-2018 DOE78_19085 a0c144a42b3fc051495c97d111af78a8 327 Pfam PF13155 Toprim-like 210 295 1.0E-11 T 01-11-2018 DOE78_19085 a0c144a42b3fc051495c97d111af78a8 327 Gene3D G3DSA:3.40.1360.10 196 312 1.0E-17 T 01-11-2018 DOE78_19085 a0c144a42b3fc051495c97d111af78a8 327 SMART SM00493 207 278 0.0092 T 01-11-2018 IPR006171 TOPRIM domain DOE78_19085 a0c144a42b3fc051495c97d111af78a8 327 SUPERFAMILY SSF57783 13 101 8.16E-7 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 8.5E-36 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 8.5E-36 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 8.5E-36 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.5E-36 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 8.5E-36 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 SUPERFAMILY SSF55424 350 472 8.08E-41 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 5.8E-61 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 Gene3D G3DSA:3.30.390.30 353 472 3.7E-46 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 6.8E-69 T 01-11-2018 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 1.0E-37 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 Gene3D G3DSA:3.50.50.60 156 278 1.2E-110 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 SUPERFAMILY SSF51905 3 375 3.29E-56 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 PIRSF PIRSF000350 1 470 5.0E-82 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 2.2E-177 T 01-11-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DOE78_16765 1c47959de2f71c68015713eb39b448e6 473 Gene3D G3DSA:3.50.50.60 5 339 1.2E-110 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_00555 287a2af4913e946443d831711733bfb0 184 SUPERFAMILY SSF46600 139 177 2.62E-7 T 01-11-2018 IPR036876 UVR domain superfamily DOE78_00555 287a2af4913e946443d831711733bfb0 184 PIRSF PIRSF015034 1 183 1.4E-66 T 01-11-2018 IPR025542 YacH protein DOE78_00555 287a2af4913e946443d831711733bfb0 184 Pfam PF02151 UvrB/uvrC motif 140 174 5.5E-7 T 01-11-2018 IPR001943 UVR domain GO:0005515 DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 Gene3D G3DSA:2.60.120.560 340 497 6.7E-46 T 01-11-2018 DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 SUPERFAMILY SSF49899 336 496 1.19E-36 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 SUPERFAMILY SSF75005 10 337 2.61E-105 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 SMART SM00640 20 456 6.7E-162 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 Gene3D G3DSA:2.115.10.20 9 339 4.1E-125 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 20 336 2.9E-99 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 20 33 - T 01-11-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_09110 0dc7c3e8b1b5c69b8b9b482759a611f6 497 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 339 490 1.9E-35 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_03175 ff2370710a04f1009f4a2ddea31d9174 380 Gene3D G3DSA:3.40.50.300 2 210 2.4E-59 T 01-11-2018 DOE78_03175 ff2370710a04f1009f4a2ddea31d9174 380 Pfam PF00270 DEAD/DEAH box helicase 26 188 3.0E-41 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_03175 ff2370710a04f1009f4a2ddea31d9174 380 SUPERFAMILY SSF52540 71 355 4.17E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03175 ff2370710a04f1009f4a2ddea31d9174 380 Pfam PF00271 Helicase conserved C-terminal domain 229 335 8.5E-28 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_03175 ff2370710a04f1009f4a2ddea31d9174 380 SMART SM00487 21 219 5.8E-48 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_03175 ff2370710a04f1009f4a2ddea31d9174 380 SMART SM00490 254 335 1.0E-30 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_03175 ff2370710a04f1009f4a2ddea31d9174 380 Gene3D G3DSA:3.40.50.300 214 378 1.4E-43 T 01-11-2018 DOE78_05530 af3a5e3de57a9256013c6a77ff47df82 143 PIRSF PIRSF036659 1 143 1.4E-55 T 01-11-2018 IPR012187 Disulphide bond formation protein BdbC DOE78_05530 af3a5e3de57a9256013c6a77ff47df82 143 Pfam PF02600 Disulfide bond formation protein DsbB 9 134 7.4E-15 T 01-11-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DOE78_05530 af3a5e3de57a9256013c6a77ff47df82 143 Gene3D G3DSA:1.20.1550.10 1 114 1.4E-14 T 01-11-2018 IPR023380 DsbB-like superfamily DOE78_05530 af3a5e3de57a9256013c6a77ff47df82 143 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 4 139 22.856 T 01-11-2018 IPR012187 Disulphide bond formation protein BdbC DOE78_05530 af3a5e3de57a9256013c6a77ff47df82 143 SUPERFAMILY SSF158442 11 136 1.31E-29 T 01-11-2018 IPR023380 DsbB-like superfamily DOE78_02190 eef768482135de845f632f362de7752e 171 Pfam PF13787 Protein of unknown function with HXXEE motif 18 129 2.0E-19 T 01-11-2018 IPR025671 Protein of unknown function with HXXEE motif DOE78_10480 fe26d5ba1f8197e286e56050128ed3f5 198 Gene3D G3DSA:2.40.10.420 165 198 5.6E-14 T 01-11-2018 DOE78_10480 fe26d5ba1f8197e286e56050128ed3f5 198 Gene3D G3DSA:1.10.10.2520 81 162 1.7E-28 T 01-11-2018 DOE78_10480 fe26d5ba1f8197e286e56050128ed3f5 198 Gene3D G3DSA:3.10.350.10 22 80 1.2E-15 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_10480 fe26d5ba1f8197e286e56050128ed3f5 198 Pfam PF01476 LysM domain 31 73 8.5E-12 T 01-11-2018 IPR018392 LysM domain DOE78_10480 fe26d5ba1f8197e286e56050128ed3f5 198 SUPERFAMILY SSF54106 29 73 8.11E-12 T 01-11-2018 DOE78_10480 fe26d5ba1f8197e286e56050128ed3f5 198 SMART SM00257 30 73 4.2E-14 T 01-11-2018 IPR018392 LysM domain DOE78_10480 fe26d5ba1f8197e286e56050128ed3f5 198 Pfam PF07486 Cell Wall Hydrolase 95 196 1.3E-24 T 01-11-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DOE78_05900 05b95a31faaac494041b1cf07df2ac9e 190 Pfam PF01047 MarR family 42 99 2.1E-13 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_05900 05b95a31faaac494041b1cf07df2ac9e 190 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 1 183 47.926 T 01-11-2018 IPR023488 HTH-type transcriptional regulator Hpr DOE78_05900 05b95a31faaac494041b1cf07df2ac9e 190 SUPERFAMILY SSF46785 6 138 3.15E-22 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_05900 05b95a31faaac494041b1cf07df2ac9e 190 SMART SM00347 35 135 2.1E-17 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_05900 05b95a31faaac494041b1cf07df2ac9e 190 Gene3D G3DSA:1.10.10.10 2 165 2.4E-45 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05900 05b95a31faaac494041b1cf07df2ac9e 190 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 244 3.2E-42 T 01-11-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 Gene3D G3DSA:3.30.420.40 238 473 3.1E-95 T 01-11-2018 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 Gene3D G3DSA:3.30.420.40 1 237 1.3E-88 T 01-11-2018 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 SUPERFAMILY SSF53067 250 467 1.3E-31 T 01-11-2018 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 6 461 2.7E-199 T 01-11-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 Hamap MF_01535 Rhamnulokinase [rhaB]. 5 472 51.512 T 01-11-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 PIRSF PIRSF000538 358 471 4.1E-9 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 PIRSF PIRSF000538 2 269 1.6E-32 T 01-11-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 SUPERFAMILY SSF53067 3 245 5.89E-52 T 01-11-2018 DOE78_02640 f6ef4cee7169667343dabf89259c050d 473 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 441 3.6E-17 T 01-11-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DOE78_10755 cc35cca4fe3d957fb7ab599dc87545a5 104 SUPERFAMILY SSF100985 5 48 3.66E-7 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_10755 cc35cca4fe3d957fb7ab599dc87545a5 104 Pfam PF08970 Sporulation inhibitor A 6 41 5.1E-5 T 01-11-2018 IPR015064 Sporulation inhibitor A DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 Gene3D G3DSA:3.40.50.720 152 288 6.7E-102 T 01-11-2018 DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 Gene3D G3DSA:3.90.180.10 19 331 6.7E-102 T 01-11-2018 DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 SUPERFAMILY SSF50129 2 174 6.54E-49 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 SUPERFAMILY SSF51735 137 308 2.17E-35 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 SMART SM00829 10 340 5.0E-9 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 6.2E-33 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_14095 c242e8f13436ec24a6881f5993e4a08a 343 Pfam PF00107 Zinc-binding dehydrogenase 175 303 9.6E-25 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Gene3D G3DSA:3.50.50.60 4 342 1.7E-187 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 2.0E-22 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.0E-22 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.0E-22 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.0E-22 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 2.0E-22 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 309 5.0E-61 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 SUPERFAMILY SSF52821 437 545 1.19E-25 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 434 4.9E-16 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 SUPERFAMILY SSF64307 569 647 9.29E-21 T 01-11-2018 IPR036868 TusA-like domain superfamily DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Gene3D G3DSA:3.50.50.60 116 442 1.7E-187 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Pfam PF01206 Sulfurtransferase TusA 580 647 7.4E-20 T 01-11-2018 IPR001455 TusA-like domain DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 SUPERFAMILY SSF55424 325 448 7.73E-35 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 SMART SM00450 456 549 1.2E-20 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Gene3D G3DSA:3.40.250.10 453 550 2.3E-25 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 SUPERFAMILY SSF51905 1 321 1.13E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Gene3D G3DSA:3.30.110.40 572 648 2.0E-25 T 01-11-2018 IPR036868 TusA-like domain superfamily DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 7.7E-15 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 7.7E-15 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.7E-15 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 7.7E-15 T 01-11-2018 DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 Pfam PF00581 Rhodanese-like domain 460 544 4.3E-10 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01040 52e223312ec2b4d47c780f03a5e33db6 648 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 580 604 - T 01-11-2018 IPR001455 TusA-like domain DOE78_13540 dc80ce58f3a1da88257cbbe80a5c0129 137 SMART SM00881 15 107 8.0E-15 T 01-11-2018 IPR003781 CoA-binding GO:0048037 DOE78_13540 dc80ce58f3a1da88257cbbe80a5c0129 137 Pfam PF13380 CoA binding domain 19 133 3.4E-37 T 01-11-2018 IPR003781 CoA-binding GO:0048037 DOE78_13540 dc80ce58f3a1da88257cbbe80a5c0129 137 Gene3D G3DSA:3.40.50.720 1 137 5.9E-39 T 01-11-2018 DOE78_13540 dc80ce58f3a1da88257cbbe80a5c0129 137 SUPERFAMILY SSF51735 10 135 4.38E-40 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_20525 1a18c8eb86f1d0cfb0407d1a7665740e 293 Gene3D G3DSA:3.90.550.10 1 289 1.3E-94 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20525 1a18c8eb86f1d0cfb0407d1a7665740e 293 SUPERFAMILY SSF53448 1 268 2.07E-71 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20525 1a18c8eb86f1d0cfb0407d1a7665740e 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 1.9E-123 T 01-11-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DOE78_20525 1a18c8eb86f1d0cfb0407d1a7665740e 293 Pfam PF00483 Nucleotidyl transferase 6 263 1.0E-32 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_03295 c8983bfc3d65766750d81e9d6e4565d7 60 Pfam PF13070 Protein of unknown function (DUF3934) 4 41 2.0E-16 T 01-11-2018 IPR025175 Protein of unknown function DUF3934 DOE78_10715 d62b965ce6543c951d61a852f0e5b502 279 Gene3D G3DSA:3.40.1190.20 1 271 2.7E-41 T 01-11-2018 IPR029056 Ribokinase-like DOE78_10715 d62b965ce6543c951d61a852f0e5b502 279 Pfam PF00294 pfkB family carbohydrate kinase 13 270 4.3E-31 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_10715 d62b965ce6543c951d61a852f0e5b502 279 SUPERFAMILY SSF53613 1 272 1.06E-45 T 01-11-2018 IPR029056 Ribokinase-like DOE78_02695 f3bae1ceecc0808102ddac7a0b818a8f 390 Gene3D G3DSA:1.20.1090.10 187 383 2.3E-74 T 01-11-2018 DOE78_02695 f3bae1ceecc0808102ddac7a0b818a8f 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 261 281 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_02695 f3bae1ceecc0808102ddac7a0b818a8f 390 SUPERFAMILY SSF56796 4 382 3.4E-131 T 01-11-2018 DOE78_02695 f3bae1ceecc0808102ddac7a0b818a8f 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_02695 f3bae1ceecc0808102ddac7a0b818a8f 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 376 1.4E-126 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DOE78_02695 f3bae1ceecc0808102ddac7a0b818a8f 390 Gene3D G3DSA:3.40.50.1970 1 185 4.3E-57 T 01-11-2018 DOE78_06320 83331c4e07f1ff1499d5bbc9c67f43d3 207 PIRSF PIRSF006324 1 206 9.6E-59 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_06320 83331c4e07f1ff1499d5bbc9c67f43d3 207 Pfam PF01810 LysE type translocator 12 204 2.7E-40 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_24515 c51ccab1e5311646ae28e41af9785006 218 SMART SM00855 18 175 3.6E-17 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_24515 c51ccab1e5311646ae28e41af9785006 218 Gene3D G3DSA:3.40.50.1240 17 217 1.5E-57 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_24515 c51ccab1e5311646ae28e41af9785006 218 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 19 211 1.3E-49 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_24515 c51ccab1e5311646ae28e41af9785006 218 PIRSF PIRSF000709 13 192 3.5E-16 T 01-11-2018 DOE78_24515 c51ccab1e5311646ae28e41af9785006 218 SUPERFAMILY SSF53254 18 215 4.84E-54 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_07925 2f835880592072f37003e865e8da6608 316 Pfam PF00551 Formyl transferase 3 180 7.8E-42 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_07925 2f835880592072f37003e865e8da6608 316 Gene3D G3DSA:3.40.50.170 1 206 2.3E-86 T 01-11-2018 DOE78_07925 2f835880592072f37003e865e8da6608 316 Gene3D G3DSA:3.10.25.10 207 315 3.3E-37 T 01-11-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_07925 2f835880592072f37003e865e8da6608 316 SUPERFAMILY SSF53328 3 206 6.28E-66 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_07925 2f835880592072f37003e865e8da6608 316 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 01-11-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_07925 2f835880592072f37003e865e8da6608 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 303 2.9E-113 T 01-11-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DOE78_07925 2f835880592072f37003e865e8da6608 316 SUPERFAMILY SSF50486 205 306 7.53E-30 T 01-11-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DOE78_07925 2f835880592072f37003e865e8da6608 316 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 2.0E-29 T 01-11-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_07925 2f835880592072f37003e865e8da6608 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 35.911 T 01-11-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DOE78_01605 f6a50c0b0575dc16ca4798b39cef7cae 396 Gene3D G3DSA:3.90.1150.10 17 387 7.7E-126 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_01605 f6a50c0b0575dc16ca4798b39cef7cae 396 Pfam PF00155 Aminotransferase class I and II 43 385 3.1E-40 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_01605 f6a50c0b0575dc16ca4798b39cef7cae 396 SUPERFAMILY SSF53383 2 389 1.2E-97 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_01605 f6a50c0b0575dc16ca4798b39cef7cae 396 Gene3D G3DSA:3.40.640.10 63 284 7.7E-126 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_21010 45326a8c9c0b6e20b390feeae7a07235 78 SUPERFAMILY SSF117916 3 77 5.89E-27 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily DOE78_21010 45326a8c9c0b6e20b390feeae7a07235 78 Pfam PF01106 NifU-like domain 10 75 9.4E-28 T 01-11-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DOE78_21010 45326a8c9c0b6e20b390feeae7a07235 78 Gene3D G3DSA:3.30.300.130 1 78 2.3E-33 T 01-11-2018 IPR034904 Fe-S cluster assembly domain superfamily DOE78_21010 45326a8c9c0b6e20b390feeae7a07235 78 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 65 2.0E-22 T 01-11-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DOE78_23035 f20f1c0f0bf282b01ff5a91747881fc0 575 Pfam PF02585 GlcNAc-PI de-N-acetylase 327 484 1.3E-10 T 01-11-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 DOE78_23035 f20f1c0f0bf282b01ff5a91747881fc0 575 Gene3D G3DSA:3.40.50.12090 55 150 1.2E-8 T 01-11-2018 DOE78_23035 f20f1c0f0bf282b01ff5a91747881fc0 575 Pfam PF04122 Putative cell wall binding repeat 2 34 119 2.9E-20 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23035 f20f1c0f0bf282b01ff5a91747881fc0 575 Pfam PF04122 Putative cell wall binding repeat 2 132 217 2.1E-15 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23035 f20f1c0f0bf282b01ff5a91747881fc0 575 Pfam PF04122 Putative cell wall binding repeat 2 226 311 2.4E-19 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23035 f20f1c0f0bf282b01ff5a91747881fc0 575 SUPERFAMILY SSF102588 324 502 4.32E-14 T 01-11-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 Pfam PF00491 Arginase family 3 293 6.3E-82 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 Gene3D G3DSA:3.40.800.10 1 298 1.9E-117 T 01-11-2018 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 PIRSF PIRSF036979 1 294 1.4E-35 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 SUPERFAMILY SSF52768 3 295 2.16E-95 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 TIGRFAM TIGR01229 rocF_arginase: arginase 5 298 2.6E-107 T 01-11-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 ProSitePatterns PS01053 Arginase family signature. 223 244 - T 01-11-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 PRINTS PR00116 Arginase signature 255 269 1.8E-42 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 PRINTS PR00116 Arginase signature 94 109 1.8E-42 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 PRINTS PR00116 Arginase signature 220 249 1.8E-42 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 PRINTS PR00116 Arginase signature 117 144 1.8E-42 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_00995 7c50773f2917b40db1963b8ac14134d1 298 PRINTS PR00116 Arginase signature 171 189 1.8E-42 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_23655 e80e17bf0dabc72701b67c854fc2d3d8 366 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 292 365 1.5E-26 T 01-11-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23655 e80e17bf0dabc72701b67c854fc2d3d8 366 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 291 4.5E-67 T 01-11-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23655 e80e17bf0dabc72701b67c854fc2d3d8 366 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 3 366 46.977 T 01-11-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23655 e80e17bf0dabc72701b67c854fc2d3d8 366 Gene3D G3DSA:1.10.645.20 4 366 1.0E-152 T 01-11-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23655 e80e17bf0dabc72701b67c854fc2d3d8 366 SUPERFAMILY SSF56762 16 365 1.44E-119 T 01-11-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 SUPERFAMILY SSF51445 2 469 9.56E-160 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 3.9E-18 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 303 317 3.9E-18 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 3.9E-18 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 3.9E-18 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 3.9E-18 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 Pfam PF00232 Glycosyl hydrolase family 1 2 473 1.1E-126 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_09450 78f00948061ff2171d2a74509c152ec1 476 Gene3D G3DSA:3.20.20.80 1 476 3.5E-158 T 01-11-2018 DOE78_14255 b0d5a097bf16088a9241ee7191767c75 210 Gene3D G3DSA:3.30.240.20 76 150 2.8E-22 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_14255 b0d5a097bf16088a9241ee7191767c75 210 Pfam PF04239 Protein of unknown function (DUF421) 84 201 4.0E-27 T 01-11-2018 IPR007353 Protein of unknown function DUF421 DOE78_06315 39511e8022de69727ce3ea84716803eb 266 PIRSF PIRSF015626 1 265 2.6E-80 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DOE78_06315 39511e8022de69727ce3ea84716803eb 266 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 26 263 8.0E-77 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DOE78_06315 39511e8022de69727ce3ea84716803eb 266 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 6 264 32.045 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DOE78_06315 39511e8022de69727ce3ea84716803eb 266 Pfam PF02634 FdhD/NarQ family 30 263 5.9E-78 T 01-11-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DOE78_06315 39511e8022de69727ce3ea84716803eb 266 SUPERFAMILY SSF53927 8 263 5.41E-78 T 01-11-2018 IPR016193 Cytidine deaminase-like GO:0003824 DOE78_06315 39511e8022de69727ce3ea84716803eb 266 Gene3D G3DSA:3.10.20.10 32 114 4.7E-14 T 01-11-2018 DOE78_06315 39511e8022de69727ce3ea84716803eb 266 Gene3D G3DSA:3.40.140.10 119 265 4.5E-48 T 01-11-2018 DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 TIGRFAM TIGR01753 flav_short: flavodoxin 4 138 4.2E-38 T 01-11-2018 IPR010087 Flavodoxin, short chain GO:0010181 DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 01-11-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 PRINTS PR00369 Flavodoxin signature 4 17 9.7E-5 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 PRINTS PR00369 Flavodoxin signature 52 63 9.7E-5 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 PRINTS PR00369 Flavodoxin signature 81 91 9.7E-5 T 01-11-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 SUPERFAMILY SSF52218 1 138 1.02E-37 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 Gene3D G3DSA:3.40.50.360 1 143 4.0E-35 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_04155 14aaebdbd7c462a05c5024da60f65301 149 Pfam PF00258 Flavodoxin 5 134 4.1E-25 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DOE78_12970 726ae44675c3d1bc420665aae1205594 351 SUPERFAMILY SSF53822 45 337 1.38E-64 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_12970 726ae44675c3d1bc420665aae1205594 351 Gene3D G3DSA:3.40.50.2300 48 324 2.1E-106 T 01-11-2018 DOE78_12970 726ae44675c3d1bc420665aae1205594 351 Pfam PF13407 Periplasmic binding protein domain 47 305 2.9E-55 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_12970 726ae44675c3d1bc420665aae1205594 351 Gene3D G3DSA:3.40.50.2300 148 338 2.1E-106 T 01-11-2018 DOE78_14970 a4498291f34a756c0dcc277dc2429464 201 Gene3D G3DSA:1.20.120.80 15 200 3.1E-52 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14970 a4498291f34a756c0dcc277dc2429464 201 SUPERFAMILY SSF81452 14 198 4.84E-51 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14970 a4498291f34a756c0dcc277dc2429464 201 Pfam PF00510 Cytochrome c oxidase subunit III 23 198 3.7E-11 T 01-11-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14970 a4498291f34a756c0dcc277dc2429464 201 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 12 200 7.3E-85 T 01-11-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 DOE78_07510 3c05bfa9945c0ab84a7603e140cc41c7 391 Pfam PF13527 Acetyltransferase (GNAT) domain 7 127 3.3E-36 T 01-11-2018 DOE78_07510 3c05bfa9945c0ab84a7603e140cc41c7 391 Gene3D G3DSA:3.40.630.30 12 280 1.1E-132 T 01-11-2018 DOE78_07510 3c05bfa9945c0ab84a7603e140cc41c7 391 Pfam PF13530 Sterol carrier protein domain 175 387 2.4E-52 T 01-11-2018 IPR025559 Enhanced intracellular survival protein domain DOE78_07510 3c05bfa9945c0ab84a7603e140cc41c7 391 Gene3D G3DSA:3.40.630.30 128 391 1.1E-132 T 01-11-2018 DOE78_07510 3c05bfa9945c0ab84a7603e140cc41c7 391 Gene3D G3DSA:3.30.1050.10 281 381 1.1E-132 T 01-11-2018 IPR036527 SCP2 sterol-binding domain superfamily DOE78_07510 3c05bfa9945c0ab84a7603e140cc41c7 391 SUPERFAMILY SSF55718 281 391 4.71E-22 T 01-11-2018 IPR036527 SCP2 sterol-binding domain superfamily DOE78_07510 3c05bfa9945c0ab84a7603e140cc41c7 391 SUPERFAMILY SSF55729 2 280 4.22E-69 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 SMART SM00342 170 253 2.3E-31 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 Gene3D G3DSA:1.10.10.60 203 258 2.4E-20 T 01-11-2018 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 SUPERFAMILY SSF46689 156 204 3.58E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 Gene3D G3DSA:1.10.10.60 155 202 1.1E-17 T 01-11-2018 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 SMART SM00448 4 118 1.2E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 249 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 Pfam PF00072 Response regulator receiver domain 6 119 1.9E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 SUPERFAMILY SSF52172 3 130 1.71E-34 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 Gene3D G3DSA:3.40.50.2300 2 150 1.4E-34 T 01-11-2018 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 SUPERFAMILY SSF46689 206 256 1.3E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 Pfam PF12833 Helix-turn-helix domain 176 254 2.6E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 2.4E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_20095 c4bd487c222ffb0bbd5a26b5faba2cd8 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 2.4E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_12330 44768be947d4765326893580106da6f5 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 116 2.9E-5 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_12330 44768be947d4765326893580106da6f5 123 Gene3D G3DSA:3.10.180.10 6 123 2.4E-14 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_12330 44768be947d4765326893580106da6f5 123 SUPERFAMILY SSF54593 7 122 2.2E-19 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_22470 89f925653f54b80cc7438b1250a59283 266 SUPERFAMILY SSF53448 3 212 1.21E-35 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_22470 89f925653f54b80cc7438b1250a59283 266 Gene3D G3DSA:3.90.550.10 1 256 5.1E-45 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_22470 89f925653f54b80cc7438b1250a59283 266 Pfam PF00535 Glycosyl transferase family 2 8 169 1.2E-21 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_18640 b8b37a15a15e880c70ae48ea95974047 308 SUPERFAMILY SSF103481 47 150 1.23E-12 T 01-11-2018 DOE78_18640 b8b37a15a15e880c70ae48ea95974047 308 SUPERFAMILY SSF103481 213 291 4.84E-8 T 01-11-2018 DOE78_18640 b8b37a15a15e880c70ae48ea95974047 308 TIGRFAM TIGR00688 rarD: protein RarD 9 265 6.6E-79 T 01-11-2018 IPR004626 RarD protein GO:0005887 DOE78_18640 b8b37a15a15e880c70ae48ea95974047 308 Pfam PF00892 EamA-like transporter family 159 285 2.2E-7 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_18640 b8b37a15a15e880c70ae48ea95974047 308 Pfam PF00892 EamA-like transporter family 10 147 9.8E-13 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 Pfam PF03129 Anticodon binding domain 347 418 8.4E-11 T 01-11-2018 IPR004154 Anticodon-binding DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 Gene3D G3DSA:3.40.50.800 339 422 5.8E-21 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 425 23.4 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 Pfam PF13393 Histidyl-tRNA synthetase 11 327 1.7E-34 T 01-11-2018 DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 SUPERFAMILY SSF55681 6 332 3.64E-68 T 01-11-2018 DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 Gene3D G3DSA:3.30.930.10 1 338 4.5E-96 T 01-11-2018 DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 SUPERFAMILY SSF52954 343 420 8.31E-16 T 01-11-2018 DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 PIRSF PIRSF001549 2 422 9.1E-114 T 01-11-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DOE78_10060 e54b766306c5177e17c2bcddfe8fb56b 425 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 419 1.7E-109 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.402 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 Pfam PF00574 Clp protease 13 192 3.0E-87 T 01-11-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 6.5E-54 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 6.5E-54 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 6.5E-54 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 6.5E-54 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 6.5E-54 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 Gene3D G3DSA:3.90.226.10 1 198 1.5E-83 T 01-11-2018 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 2.6E-107 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 01-11-2018 IPR018215 ClpP, Ser active site DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 SUPERFAMILY SSF52096 10 193 9.03E-74 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_22120 1b97ffcd2fa1bc6846a6082066e866d9 202 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 01-11-2018 IPR033135 ClpP, histidine active site DOE78_22315 085979538c7e888655cbdefa3ee7c83f 271 Pfam PF02673 Bacitracin resistance protein BacA 11 261 5.8E-77 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DOE78_22315 085979538c7e888655cbdefa3ee7c83f 271 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 268 16.742 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DOE78_04050 a518bdf2ecad2f2738d194e96767d2a5 266 Hamap MF_00548 Zinc transporter ZupT [zupT]. 5 266 35.793 T 01-11-2018 IPR023498 Zinc transporter ZupT DOE78_04050 a518bdf2ecad2f2738d194e96767d2a5 266 Pfam PF02535 ZIP Zinc transporter 102 260 1.2E-25 T 01-11-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 DOE78_08435 e3338f7c2afca494c407776456cf9fec 79 Pfam PF05239 PRC-barrel domain 2 78 6.9E-14 T 01-11-2018 IPR027275 PRC-barrel domain DOE78_08435 e3338f7c2afca494c407776456cf9fec 79 Gene3D G3DSA:2.30.30.240 2 79 3.7E-8 T 01-11-2018 DOE78_08435 e3338f7c2afca494c407776456cf9fec 79 SUPERFAMILY SSF50346 2 75 1.02E-11 T 01-11-2018 IPR011033 PRC-barrel-like superfamily DOE78_08435 e3338f7c2afca494c407776456cf9fec 79 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 1.1E-27 T 01-11-2018 IPR014238 Sporulation protein YlmC/YmxH DOE78_22835 eb7ce436533f52a964d2f62d23d81cca 599 Pfam PF13205 Bacterial Ig-like domain 118 241 2.2E-12 T 01-11-2018 IPR032812 SbsA, Ig-like domain DOE78_22835 eb7ce436533f52a964d2f62d23d81cca 599 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 563 596 3.3E-4 T 01-11-2018 DOE78_22835 eb7ce436533f52a964d2f62d23d81cca 599 Gene3D G3DSA:2.60.40.1120 27 116 5.8E-7 T 01-11-2018 DOE78_22835 eb7ce436533f52a964d2f62d23d81cca 599 Pfam PF00746 LPXTG cell wall anchor motif 557 596 4.7E-4 T 01-11-2018 IPR019948 Gram-positive LPXTG cell wall anchor DOE78_00145 ec440061501383633cf083b565d4c11a 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 112.207 T 01-11-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DOE78_00145 ec440061501383633cf083b565d4c11a 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 01-11-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 DOE78_00145 ec440061501383633cf083b565d4c11a 198 Gene3D G3DSA:1.10.8.420 1 53 4.1E-20 T 01-11-2018 DOE78_00145 ec440061501383633cf083b565d4c11a 198 Gene3D G3DSA:3.40.1360.10 77 198 1.6E-50 T 01-11-2018 DOE78_00145 ec440061501383633cf083b565d4c11a 198 Pfam PF13662 Toprim domain 81 171 1.1E-26 T 01-11-2018 IPR006171 TOPRIM domain DOE78_00145 ec440061501383633cf083b565d4c11a 198 SMART SM00493 80 165 2.4E-17 T 01-11-2018 IPR006171 TOPRIM domain DOE78_00145 ec440061501383633cf083b565d4c11a 198 SUPERFAMILY SSF111304 2 198 6.54E-80 T 01-11-2018 IPR023627 Recombination protein RecR DOE78_00145 ec440061501383633cf083b565d4c11a 198 Pfam PF02132 RecR protein 40 78 1.9E-17 T 01-11-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DOE78_00145 ec440061501383633cf083b565d4c11a 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 4.4E-91 T 01-11-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DOE78_06045 046f1d35839201ef34373a12e8163e48 718 Pfam PF12698 ABC-2 family transporter protein 23 153 9.8E-14 T 01-11-2018 DOE78_06045 046f1d35839201ef34373a12e8163e48 718 Pfam PF12698 ABC-2 family transporter protein 506 702 2.5E-14 T 01-11-2018 DOE78_06045 046f1d35839201ef34373a12e8163e48 718 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 9 171 5.7E-62 T 01-11-2018 IPR017500 Phage infection protein, YhgE, N-terminal DOE78_06045 046f1d35839201ef34373a12e8163e48 718 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 384 410 1.3E-4 T 01-11-2018 IPR023908 xxxLxxG heptad repeat DOE78_06045 046f1d35839201ef34373a12e8163e48 718 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 506 709 9.4E-69 T 01-11-2018 IPR017501 Phage infection protein, YhgE, C-terminal DOE78_04540 6e1c3f25b87998419d2396b70d981d7b 418 Gene3D G3DSA:1.20.1250.20 215 416 6.1E-10 T 01-11-2018 DOE78_04540 6e1c3f25b87998419d2396b70d981d7b 418 SUPERFAMILY SSF103473 10 408 2.62E-38 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_04540 6e1c3f25b87998419d2396b70d981d7b 418 Gene3D G3DSA:1.20.1250.20 9 195 1.6E-22 T 01-11-2018 DOE78_04540 6e1c3f25b87998419d2396b70d981d7b 418 Pfam PF07690 Major Facilitator Superfamily 270 411 1.1E-10 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_04540 6e1c3f25b87998419d2396b70d981d7b 418 Pfam PF07690 Major Facilitator Superfamily 15 246 1.3E-18 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_03385 db5ac0e53b4f7269652f11d5cd1364a0 111 Pfam PF00578 AhpC/TSA family 2 69 2.5E-12 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_03385 db5ac0e53b4f7269652f11d5cd1364a0 111 SUPERFAMILY SSF52833 2 111 9.61E-26 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_03385 db5ac0e53b4f7269652f11d5cd1364a0 111 Gene3D G3DSA:3.40.30.10 1 111 4.6E-31 T 01-11-2018 DOE78_13415 e3f0f1070789300b9a282582b37790ff 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 230 5.5E-22 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_13415 e3f0f1070789300b9a282582b37790ff 315 SUPERFAMILY SSF51735 1 313 1.97E-53 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13415 e3f0f1070789300b9a282582b37790ff 315 Gene3D G3DSA:3.40.50.720 1 314 5.7E-101 T 01-11-2018 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 Pfam PF00800 Prephenate dehydratase 3 184 3.3E-55 T 01-11-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 227 234 - T 01-11-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 Gene3D G3DSA:3.40.190.10 5 181 3.3E-51 T 01-11-2018 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 PIRSF PIRSF001500 1 281 3.2E-68 T 01-11-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 Gene3D G3DSA:3.30.70.260 192 281 2.1E-26 T 01-11-2018 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 SUPERFAMILY SSF55021 195 279 7.75E-24 T 01-11-2018 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 SUPERFAMILY SSF53850 2 188 1.83E-51 T 01-11-2018 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 Gene3D G3DSA:3.40.190.10 83 172 3.3E-51 T 01-11-2018 DOE78_17905 8e10fac67d5cff8115476fc7fc05c757 284 Pfam PF01842 ACT domain 200 254 3.5E-7 T 01-11-2018 IPR002912 ACT domain DOE78_12675 69891e524b3bb81a4511fe171e1e5742 108 Gene3D G3DSA:3.40.30.10 1 105 1.6E-12 T 01-11-2018 DOE78_12675 69891e524b3bb81a4511fe171e1e5742 108 SUPERFAMILY SSF52833 3 100 1.66E-12 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_12675 69891e524b3bb81a4511fe171e1e5742 108 Pfam PF00578 AhpC/TSA family 3 80 2.7E-5 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_12710 cee08afe1090f59fd9e17c2d8e89be2f 149 Gene3D G3DSA:3.30.530.20 5 148 4.3E-6 T 01-11-2018 IPR023393 START-like domain superfamily DOE78_12710 cee08afe1090f59fd9e17c2d8e89be2f 149 SUPERFAMILY SSF55961 6 141 3.3E-9 T 01-11-2018 DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 SMART SM00924 33 136 2.7E-28 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 SMART SM00116 143 196 0.041 T 01-11-2018 IPR000644 CBS domain DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 SMART SM00116 207 255 1.7E-4 T 01-11-2018 IPR000644 CBS domain DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 Gene3D G3DSA:3.10.580.10 133 259 3.2E-40 T 01-11-2018 DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 Pfam PF03448 MgtE intracellular N domain 33 134 5.4E-21 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 Pfam PF00571 CBS domain 200 253 1.4E-4 T 01-11-2018 IPR000644 CBS domain DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 Pfam PF00571 CBS domain 137 194 7.0E-7 T 01-11-2018 IPR000644 CBS domain DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 8 450 1.1E-160 T 01-11-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 Gene3D G3DSA:1.25.60.10 4 131 4.8E-21 T 01-11-2018 IPR038076 MgtE, N-terminal domain superfamily DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 SUPERFAMILY SSF158791 10 133 1.44E-25 T 01-11-2018 DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 Gene3D G3DSA:1.10.357.20 273 449 6.2E-58 T 01-11-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 Pfam PF01769 Divalent cation transporter 320 441 1.0E-29 T 01-11-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 SUPERFAMILY SSF161093 279 448 1.01E-50 T 01-11-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DOE78_01215 8a5041365d4a877c277e82abe7d2bd08 452 SUPERFAMILY SSF54631 135 265 7.96E-30 T 01-11-2018 DOE78_13950 3cc614d350df8fc954f043b0d8de1cdb 295 SUPERFAMILY SSF161098 55 285 7.85E-66 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13950 3cc614d350df8fc954f043b0d8de1cdb 295 Gene3D G3DSA:1.10.3720.10 51 293 3.3E-73 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13950 3cc614d350df8fc954f043b0d8de1cdb 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 285 4.6E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_14395 b9d5edf2ab60e351a039b79bd89df072 176 Pfam PF13411 MerR HTH family regulatory protein 1 54 3.5E-9 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_14395 b9d5edf2ab60e351a039b79bd89df072 176 Gene3D G3DSA:1.10.1660.10 1 63 2.2E-18 T 01-11-2018 DOE78_13425 993b2d1cfc68464d9a6e62dd8e2b3083 52 Pfam PF10262 Rdx family 1 48 1.5E-9 T 01-11-2018 IPR011893 Selenoprotein, Rdx-type DOE78_13425 993b2d1cfc68464d9a6e62dd8e2b3083 52 Gene3D G3DSA:3.40.30.10 1 52 9.4E-11 T 01-11-2018 DOE78_13425 993b2d1cfc68464d9a6e62dd8e2b3083 52 SUPERFAMILY SSF52833 2 47 1.03E-7 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_12050 bcbf30f50c12a0f71699555853aca6b5 428 Pfam PF01547 Bacterial extracellular solute-binding protein 51 344 9.9E-36 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_12050 bcbf30f50c12a0f71699555853aca6b5 428 SUPERFAMILY SSF53850 22 426 3.26E-81 T 01-11-2018 DOE78_12050 bcbf30f50c12a0f71699555853aca6b5 428 Gene3D G3DSA:3.40.190.10 57 381 6.5E-96 T 01-11-2018 DOE78_12050 bcbf30f50c12a0f71699555853aca6b5 428 Gene3D G3DSA:3.40.190.10 153 420 6.5E-96 T 01-11-2018 DOE78_16850 6b5716e5c5bfe5d9896869dce03a9cd9 77 Pfam PF02609 Exonuclease VII small subunit 9 59 1.6E-21 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DOE78_16850 6b5716e5c5bfe5d9896869dce03a9cd9 77 SUPERFAMILY SSF116842 3 71 1.12E-21 T 01-11-2018 DOE78_16850 6b5716e5c5bfe5d9896869dce03a9cd9 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 8 47 5.0E-12 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DOE78_16850 6b5716e5c5bfe5d9896869dce03a9cd9 77 PIRSF PIRSF006488 1 77 4.5E-20 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DOE78_16850 6b5716e5c5bfe5d9896869dce03a9cd9 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 15.757 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DOE78_16850 6b5716e5c5bfe5d9896869dce03a9cd9 77 Gene3D G3DSA:1.10.287.1040 2 77 8.0E-22 T 01-11-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DOE78_16850 6b5716e5c5bfe5d9896869dce03a9cd9 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 64 5.3E-23 T 01-11-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 SUPERFAMILY SSF53790 2 256 1.96E-76 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 SUPERFAMILY SSF69618 254 485 1.19E-18 T 01-11-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 Gene3D G3DSA:3.40.50.10090 265 344 3.7E-5 T 01-11-2018 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 241 2.6E-89 T 01-11-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 Gene3D G3DSA:3.40.1010.10 2 119 3.1E-39 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 Gene3D G3DSA:3.30.950.10 120 264 3.5E-47 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 217 5.7E-41 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 PIRSF PIRSF036426 1 256 3.3E-93 T 01-11-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_13295 a3962c1300ba208c3faf6ec59633e1aa 489 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 01-11-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 167.694 T 01-11-2018 IPR008135 Competence-induced protein CinA DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 166 2.2E-30 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 266 407 5.3E-46 T 01-11-2018 IPR008136 CinA, C-terminal DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 SUPERFAMILY SSF142433 250 410 8.76E-51 T 01-11-2018 IPR036653 CinA-like, C-terminal DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 PIRSF PIRSF006728 1 412 2.1E-163 T 01-11-2018 IPR008135 Competence-induced protein CinA DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 Gene3D G3DSA:3.40.980.10 1 170 5.2E-50 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.5E-34 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 411 7.8E-155 T 01-11-2018 IPR008135 Competence-induced protein CinA DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 SMART SM00852 4 170 2.4E-41 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 Pfam PF02464 Competence-damaged protein 257 406 3.7E-53 T 01-11-2018 IPR008136 CinA, C-terminal DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 SUPERFAMILY SSF53218 1 206 4.45E-39 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily DOE78_08550 cd50b1191f1bf3ee35d8ed6c4978e859 412 Gene3D G3DSA:3.90.950.20 243 410 9.2E-54 T 01-11-2018 IPR036653 CinA-like, C-terminal DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 SUPERFAMILY SSF56003 133 749 1.44E-156 T 01-11-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 Gene3D G3DSA:3.90.1170.50 38 129 5.4E-114 T 01-11-2018 DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 Gene3D G3DSA:3.30.365.10 444 604 2.5E-82 T 01-11-2018 DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 Gene3D G3DSA:3.30.365.10 21 277 5.4E-114 T 01-11-2018 DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 SUPERFAMILY SSF54665 12 148 1.44E-40 T 01-11-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 TIGRFAM TIGR03196 pucD: xanthine dehydrogenase D subunit 12 744 1.3E-294 T 01-11-2018 IPR017609 Xanthine dehydrogenase D subunit KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 Gene3D G3DSA:3.30.365.10 364 742 2.5E-82 T 01-11-2018 DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 150 688 7.7E-136 T 01-11-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 SMART SM01008 23 129 3.5E-48 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 129 2.3E-31 T 01-11-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DOE78_20280 7ba5c6ec6cb099a1823daec5ba597e2f 757 Gene3D G3DSA:3.30.365.10 130 353 5.4E-114 T 01-11-2018 DOE78_06695 df288acda2977a80c1b08ff2c8a882b7 295 Gene3D G3DSA:3.30.2350.10 83 295 1.9E-64 T 01-11-2018 DOE78_06695 df288acda2977a80c1b08ff2c8a882b7 295 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_06695 df288acda2977a80c1b08ff2c8a882b7 295 SUPERFAMILY SSF55120 76 294 3.84E-68 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_06695 df288acda2977a80c1b08ff2c8a882b7 295 Pfam PF00849 RNA pseudouridylate synthase 91 241 2.1E-26 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_06695 df288acda2977a80c1b08ff2c8a882b7 295 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 27 294 3.4E-69 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_10600 e0b6f28ace1bcfcc3ee7abe3311e4f5b 215 Pfam PF13599 Pentapeptide repeats (9 copies) 49 114 2.0E-12 T 01-11-2018 IPR001646 Pentapeptide repeat DOE78_10600 e0b6f28ace1bcfcc3ee7abe3311e4f5b 215 Pfam PF13599 Pentapeptide repeats (9 copies) 120 196 3.0E-11 T 01-11-2018 IPR001646 Pentapeptide repeat DOE78_10600 e0b6f28ace1bcfcc3ee7abe3311e4f5b 215 SUPERFAMILY SSF141571 38 213 3.63E-41 T 01-11-2018 DOE78_10600 e0b6f28ace1bcfcc3ee7abe3311e4f5b 215 Gene3D G3DSA:2.160.20.100 2 214 1.3E-50 T 01-11-2018 DOE78_09245 8a15cd7ba36792c302b5d794efcfabc4 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 243 2.7E-32 T 01-11-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DOE78_09245 8a15cd7ba36792c302b5d794efcfabc4 283 Gene3D G3DSA:3.40.830.10 3 282 6.5E-77 T 01-11-2018 DOE78_09245 8a15cd7ba36792c302b5d794efcfabc4 283 SUPERFAMILY SSF53213 8 259 2.35E-46 T 01-11-2018 DOE78_11545 4112822e86dd792b7410926466e18f30 200 Pfam PF00565 Staphylococcal nuclease homologue 78 185 3.7E-25 T 01-11-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DOE78_11545 4112822e86dd792b7410926466e18f30 200 SUPERFAMILY SSF50199 51 189 1.18E-33 T 01-11-2018 DOE78_11545 4112822e86dd792b7410926466e18f30 200 SMART SM00318 53 186 8.0E-34 T 01-11-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DOE78_11545 4112822e86dd792b7410926466e18f30 200 Gene3D G3DSA:2.40.50.90 49 190 4.7E-45 T 01-11-2018 IPR035437 SNase-like, OB-fold superfamily DOE78_10455 364ffff7e44921ff5cca0cb12f656d05 286 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 225 279 2.3E-18 T 01-11-2018 IPR019264 Domain of unknown function DUF2179 DOE78_10455 364ffff7e44921ff5cca0cb12f656d05 286 Gene3D G3DSA:3.30.70.120 198 272 8.9E-19 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_10455 364ffff7e44921ff5cca0cb12f656d05 286 PIRSF PIRSF006483 1 285 3.4E-72 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_10455 364ffff7e44921ff5cca0cb12f656d05 286 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 15 219 6.3E-55 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_00585 b6098c3c060cccbf508070802c8288ea 160 Gene3D G3DSA:3.30.1330.50 1 160 1.2E-70 T 01-11-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DOE78_00585 b6098c3c060cccbf508070802c8288ea 160 Pfam PF02542 YgbB family 2 155 8.0E-67 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DOE78_00585 b6098c3c060cccbf508070802c8288ea 160 SUPERFAMILY SSF69765 1 157 2.62E-67 T 01-11-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DOE78_00585 b6098c3c060cccbf508070802c8288ea 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.9E-72 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DOE78_00585 b6098c3c060cccbf508070802c8288ea 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 01-11-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DOE78_00585 b6098c3c060cccbf508070802c8288ea 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 37.407 T 01-11-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DOE78_13945 d907df4ed487454029f7c35c99fed67d 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 269 1.8E-14 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_13945 d907df4ed487454029f7c35c99fed67d 274 Gene3D G3DSA:1.10.3720.10 2 263 2.6E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13945 d907df4ed487454029f7c35c99fed67d 274 SUPERFAMILY SSF161098 4 270 2.9E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09205 23815cecd59da5beb41571a154c47793 449 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 1.3E-47 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 1.3E-47 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 1.3E-47 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 146 172 1.3E-47 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 1.3E-47 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 186 208 1.3E-47 T 01-11-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 166 439 7.7E-23 T 01-11-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 SUPERFAMILY SSF50022 17 160 2.36E-48 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 88 111 - T 01-11-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 Gene3D G3DSA:3.90.380.10 27 437 1.4E-153 T 01-11-2018 DOE78_09205 23815cecd59da5beb41571a154c47793 449 SUPERFAMILY SSF55961 163 440 2.67E-53 T 01-11-2018 DOE78_09205 23815cecd59da5beb41571a154c47793 449 Gene3D G3DSA:2.102.10.10 45 170 1.4E-153 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_09205 23815cecd59da5beb41571a154c47793 449 Pfam PF00355 Rieske [2Fe-2S] domain 45 124 3.5E-20 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DOE78_18915 7ed8b9b0eee4a2f87d7a773dc1430d54 394 SUPERFAMILY SSF52402 42 250 3.67E-40 T 01-11-2018 DOE78_18915 7ed8b9b0eee4a2f87d7a773dc1430d54 394 Gene3D G3DSA:3.40.50.620 34 261 8.8E-49 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_18915 7ed8b9b0eee4a2f87d7a773dc1430d54 394 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 66 310 3.8E-29 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 442 450 - T 01-11-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 344 534 1.7E-34 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 5 533 3.0E-277 T 01-11-2018 IPR014251 Sporulation protease LonB DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 2.1E-32 T 01-11-2018 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 2.1E-32 T 01-11-2018 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 2.1E-32 T 01-11-2018 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 2.1E-32 T 01-11-2018 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 2.1E-32 T 01-11-2018 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 SUPERFAMILY SSF52540 55 328 7.84E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 Gene3D G3DSA:3.30.230.10 344 553 1.5E-51 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 SMART SM00382 89 267 3.6E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 266 4.7E-19 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_18080 eda6bf4f157fd1c33cebc6cc01a1a644 555 SUPERFAMILY SSF54211 351 533 1.71E-42 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_09215 be663f6c1d027d9c48088ec192bc0f4e 487 Pfam PF00171 Aldehyde dehydrogenase family 20 482 1.4E-170 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_09215 be663f6c1d027d9c48088ec192bc0f4e 487 Gene3D G3DSA:3.40.605.10 16 479 1.7E-178 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_09215 be663f6c1d027d9c48088ec192bc0f4e 487 SUPERFAMILY SSF53720 11 486 3.4E-163 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_09215 be663f6c1d027d9c48088ec192bc0f4e 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DOE78_09215 be663f6c1d027d9c48088ec192bc0f4e 487 Gene3D G3DSA:3.40.309.10 262 453 1.7E-178 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_08515 b630e25087e1f7bce9ed60832c6c88ee 425 SUPERFAMILY SSF63411 247 412 1.2E-33 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DOE78_08515 b630e25087e1f7bce9ed60832c6c88ee 425 Gene3D G3DSA:3.30.830.10 238 423 3.4E-46 T 01-11-2018 DOE78_08515 b630e25087e1f7bce9ed60832c6c88ee 425 Gene3D G3DSA:3.30.830.10 5 236 2.9E-66 T 01-11-2018 DOE78_08515 b630e25087e1f7bce9ed60832c6c88ee 425 Pfam PF05193 Peptidase M16 inactive domain 185 355 7.1E-25 T 01-11-2018 IPR007863 Peptidase M16, C-terminal DOE78_08515 b630e25087e1f7bce9ed60832c6c88ee 425 SUPERFAMILY SSF63411 12 224 1.05E-22 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DOE78_17960 62ec741a60c149a7845550c385189f99 226 SUPERFAMILY SSF63848 105 205 1.83E-28 T 01-11-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 DOE78_17960 62ec741a60c149a7845550c385189f99 226 Gene3D G3DSA:3.30.160.540 5 85 5.9E-28 T 01-11-2018 DOE78_17960 62ec741a60c149a7845550c385189f99 226 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 8 209 5.9E-35 T 01-11-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DOE78_17960 62ec741a60c149a7845550c385189f99 226 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 6 210 20.849 T 01-11-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DOE78_17960 62ec741a60c149a7845550c385189f99 226 Gene3D G3DSA:2.160.20.70 99 224 9.8E-36 T 01-11-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 DOE78_17960 62ec741a60c149a7845550c385189f99 226 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 107 206 4.5E-30 T 01-11-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 DOE78_14620 9dafe2b9b66cae838c5b82a8ef0dbf48 621 Gene3D G3DSA:3.20.20.220 313 602 3.0E-51 T 01-11-2018 DOE78_14620 9dafe2b9b66cae838c5b82a8ef0dbf48 621 SUPERFAMILY SSF82282 2 361 2.49E-99 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DOE78_14620 9dafe2b9b66cae838c5b82a8ef0dbf48 621 Pfam PF02219 Methylenetetrahydrofolate reductase 318 576 1.7E-28 T 01-11-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DOE78_14620 9dafe2b9b66cae838c5b82a8ef0dbf48 621 Gene3D G3DSA:3.20.20.330 1 294 7.2E-86 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DOE78_14620 9dafe2b9b66cae838c5b82a8ef0dbf48 621 Pfam PF02574 Homocysteine S-methyltransferase 12 280 1.5E-55 T 01-11-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DOE78_14620 9dafe2b9b66cae838c5b82a8ef0dbf48 621 SUPERFAMILY SSF51730 318 603 2.55E-68 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 15 296 7.2E-71 T 01-11-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 ProSitePatterns PS01074 Terpene synthases signature. 480 494 - T 01-11-2018 IPR002365 Terpene synthase, conserved site GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 SUPERFAMILY SSF48239 301 625 6.75E-84 T 01-11-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 Gene3D G3DSA:1.50.10.20 15 621 1.2E-199 T 01-11-2018 DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 14 623 6.8E-138 T 01-11-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 16 623 4.9E-120 T 01-11-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 306 623 8.0E-92 T 01-11-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 SUPERFAMILY SSF48239 34 300 1.1E-42 T 01-11-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DOE78_14295 bedb37b053c6efadf3192ce25d7ba98e 626 Gene3D G3DSA:1.50.10.20 31 304 1.2E-199 T 01-11-2018 DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 Gene3D G3DSA:3.30.565.10 449 600 3.7E-16 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 Pfam PF06580 Histidine kinase 390 467 1.6E-23 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 599 2.6E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 Pfam PF02743 Cache domain 44 288 1.4E-18 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 SMART SM00304 326 378 3.6E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 Gene3D G3DSA:1.10.8.500 326 378 2.7E-9 T 01-11-2018 DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 SUPERFAMILY SSF158472 326 377 7.59E-11 T 01-11-2018 DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 Pfam PF00672 HAMP domain 326 374 3.1E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 SUPERFAMILY SSF55874 448 597 3.14E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_11080 adae39a2403c87ab455fbc27a5d8dbdc 611 Gene3D G3DSA:3.30.450.20 184 303 1.2E-8 T 01-11-2018 DOE78_21325 c0ebe84ee8b92a8f5612d95feb25a7ae 163 Pfam PF12822 ECF transporter, substrate-specific component 5 147 5.9E-11 T 01-11-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 DOE78_21325 c0ebe84ee8b92a8f5612d95feb25a7ae 163 Gene3D G3DSA:1.10.1760.20 1 156 1.3E-16 T 01-11-2018 DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 60 178 3.9E-11 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 Gene3D G3DSA:3.40.50.150 205 403 2.0E-69 T 01-11-2018 DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 7 197 4.9E-53 T 01-11-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 227 347 5.6E-35 T 01-11-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 SUPERFAMILY SSF53335 178 363 1.91E-24 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 Gene3D G3DSA:3.40.1010.10 2 99 9.1E-12 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 PIRSF PIRSF036428 1 399 1.3E-117 T 01-11-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 DOE78_12815 54bdca554c92dbc7e69c01b885a3c31c 404 SUPERFAMILY SSF53790 4 200 2.76E-30 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_01825 57db012a38c9bffb41618ab2ecd7312d 162 SMART SM01001 3 154 1.9E-107 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DOE78_01825 57db012a38c9bffb41618ab2ecd7312d 162 PIRSF PIRSF001338 1 162 1.8E-71 T 01-11-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DOE78_01825 57db012a38c9bffb41618ab2ecd7312d 162 Gene3D G3DSA:3.40.50.7700 1 162 4.0E-75 T 01-11-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DOE78_01825 57db012a38c9bffb41618ab2ecd7312d 162 SUPERFAMILY SSF52255 4 160 3.14E-69 T 01-11-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DOE78_01825 57db012a38c9bffb41618ab2ecd7312d 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 161 8.4E-70 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DOE78_01825 57db012a38c9bffb41618ab2ecd7312d 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 34.087 T 01-11-2018 IPR033747 Class I PurE DOE78_01825 57db012a38c9bffb41618ab2ecd7312d 162 Pfam PF00731 AIR carboxylase 4 152 1.9E-67 T 01-11-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DOE78_07655 75dd40dcd96dffe102ee56ea27a30549 300 Gene3D G3DSA:3.40.50.720 1 168 1.7E-33 T 01-11-2018 DOE78_07655 75dd40dcd96dffe102ee56ea27a30549 300 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 179 294 7.2E-28 T 01-11-2018 IPR013752 Ketopantoate reductase, C-terminal domain DOE78_07655 75dd40dcd96dffe102ee56ea27a30549 300 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 294 1.5E-63 T 01-11-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 DOE78_07655 75dd40dcd96dffe102ee56ea27a30549 300 Gene3D G3DSA:1.10.1040.10 175 299 3.0E-39 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_07655 75dd40dcd96dffe102ee56ea27a30549 300 SUPERFAMILY SSF51735 1 167 3.03E-22 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_07655 75dd40dcd96dffe102ee56ea27a30549 300 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 145 1.9E-25 T 01-11-2018 IPR013332 Ketopantoate reductase, N-terminal domain DOE78_07655 75dd40dcd96dffe102ee56ea27a30549 300 SUPERFAMILY SSF48179 177 294 6.46E-24 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_04835 0f186ba45ee1bba79d169b1add642771 336 Gene3D G3DSA:3.40.190.10 131 336 1.2E-37 T 01-11-2018 DOE78_04835 0f186ba45ee1bba79d169b1add642771 336 Gene3D G3DSA:3.40.190.10 32 130 3.1E-11 T 01-11-2018 DOE78_04835 0f186ba45ee1bba79d169b1add642771 336 SUPERFAMILY SSF53850 37 257 1.65E-48 T 01-11-2018 DOE78_04835 0f186ba45ee1bba79d169b1add642771 336 SMART SM00062 38 267 6.1E-4 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_04835 0f186ba45ee1bba79d169b1add642771 336 Pfam PF09084 NMT1/THI5 like 57 256 1.0E-23 T 01-11-2018 IPR015168 SsuA/THI5-like DOE78_04835 0f186ba45ee1bba79d169b1add642771 336 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 39 331 6.6E-64 T 01-11-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 203 1.2E-31 T 01-11-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 1 208 37.754 T 01-11-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 Gene3D G3DSA:3.10.20.400 1 89 1.5E-38 T 01-11-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 Gene3D G3DSA:1.10.287.1080 116 210 1.6E-32 T 01-11-2018 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 117 203 21.089 T 01-11-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 SUPERFAMILY SSF101386 119 207 2.06E-26 T 01-11-2018 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 207 6.1E-20 T 01-11-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 SUPERFAMILY SSF141734 3 104 8.89E-46 T 01-11-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 48 97 3.0E-20 T 01-11-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DOE78_22160 5d17eeef1bd7bbf1fa992e1b3771c7b9 213 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 26 98 1.7E-33 T 01-11-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 Gene3D G3DSA:3.20.20.300 40 349 2.0E-103 T 01-11-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 SUPERFAMILY SSF51445 37 370 7.9E-79 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 3.9E-30 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 93 109 3.9E-30 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 272 290 3.9E-30 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 172 188 3.9E-30 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 PRINTS PR00133 Glycosyl hydrolase family 3 signature 126 145 3.9E-30 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 Gene3D G3DSA:2.60.40.10 635 758 7.5E-36 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 Gene3D G3DSA:3.40.50.1700 357 634 4.7E-85 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 632 1.6E-43 T 01-11-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 SMART SM01217 668 739 6.1E-27 T 01-11-2018 IPR026891 Fibronectin type III-like domain DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 SUPERFAMILY SSF52279 373 635 2.09E-44 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 Pfam PF14310 Fibronectin type III-like domain 668 739 2.4E-23 T 01-11-2018 IPR026891 Fibronectin type III-like domain DOE78_12305 15f46af97dfd88d1a448e48338e3da92 775 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 85 339 1.8E-50 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_07875 4230e71cceb946b97d660c7afe2306cf 211 Gene3D G3DSA:3.40.50.2020 1 210 6.0E-65 T 01-11-2018 DOE78_07875 4230e71cceb946b97d660c7afe2306cf 211 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 9 176 6.0E-48 T 01-11-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07875 4230e71cceb946b97d660c7afe2306cf 211 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 211 29.826 T 01-11-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07875 4230e71cceb946b97d660c7afe2306cf 211 Pfam PF00156 Phosphoribosyl transferase domain 45 165 3.0E-19 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_07875 4230e71cceb946b97d660c7afe2306cf 211 SUPERFAMILY SSF53271 8 206 7.74E-54 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_17320 990688d927104ef86bf5fb5e067ff262 371 SUPERFAMILY SSF102705 5 370 9.03E-130 T 01-11-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DOE78_17320 990688d927104ef86bf5fb5e067ff262 371 Gene3D G3DSA:3.40.1390.30 3 126 1.6E-38 T 01-11-2018 DOE78_17320 990688d927104ef86bf5fb5e067ff262 371 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 350 8.0E-79 T 01-11-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DOE78_17320 990688d927104ef86bf5fb5e067ff262 371 Gene3D G3DSA:3.30.70.120 132 241 8.7E-43 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_17320 990688d927104ef86bf5fb5e067ff262 371 PIRSF PIRSF037489 2 371 1.6E-152 T 01-11-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria DOE78_17320 990688d927104ef86bf5fb5e067ff262 371 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 367 4.6E-92 T 01-11-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DOE78_19965 f199af71a2bbdcc2c4f7cedd0b49a0ee 92 Gene3D G3DSA:3.40.50.2300 2 92 9.1E-28 T 01-11-2018 DOE78_19965 f199af71a2bbdcc2c4f7cedd0b49a0ee 92 SUPERFAMILY SSF52794 3 89 8.89E-19 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_19965 f199af71a2bbdcc2c4f7cedd0b49a0ee 92 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 74 3.5E-13 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_05725 6b9572c095824fa09ff2bfdf4d2730b1 74 SUPERFAMILY SSF50037 5 73 5.49E-17 T 01-11-2018 IPR008988 Transcriptional repressor, C-terminal DOE78_05725 6b9572c095824fa09ff2bfdf4d2730b1 74 Pfam PF04023 FeoA domain 2 72 4.3E-14 T 01-11-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DOE78_05725 6b9572c095824fa09ff2bfdf4d2730b1 74 SMART SM00899 1 73 9.0E-16 T 01-11-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DOE78_05725 6b9572c095824fa09ff2bfdf4d2730b1 74 Gene3D G3DSA:2.30.30.90 1 73 2.1E-18 T 01-11-2018 IPR038157 Ferrous iron transporter, core domain DOE78_22695 ffae85e97e8bf59e9f8fedfcc9bb0252 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 291 1.5E-14 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_22695 ffae85e97e8bf59e9f8fedfcc9bb0252 298 Gene3D G3DSA:1.10.3720.10 6 289 1.9E-73 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_22695 ffae85e97e8bf59e9f8fedfcc9bb0252 298 SUPERFAMILY SSF161098 19 298 8.76E-59 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12845 fdf78e91d24b7d1814e04937771a1346 143 SMART SM00347 29 129 4.3E-9 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12845 fdf78e91d24b7d1814e04937771a1346 143 Gene3D G3DSA:1.10.10.10 9 139 5.1E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12845 fdf78e91d24b7d1814e04937771a1346 143 Pfam PF12802 MarR family 35 92 1.0E-7 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12845 fdf78e91d24b7d1814e04937771a1346 143 SUPERFAMILY SSF46785 33 138 2.61E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12525 6c132ac25e6628bf7ac369e52a595521 399 SUPERFAMILY SSF109604 191 349 3.11E-11 T 01-11-2018 DOE78_12525 6c132ac25e6628bf7ac369e52a595521 399 Gene3D G3DSA:1.10.3210.10 23 352 2.5E-34 T 01-11-2018 DOE78_12525 6c132ac25e6628bf7ac369e52a595521 399 Pfam PF13487 HD domain 248 304 3.1E-13 T 01-11-2018 DOE78_22930 3058d23a85595cbf8c59f26e146c624b 87 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 85 2.2E-14 T 01-11-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DOE78_22930 3058d23a85595cbf8c59f26e146c624b 87 Pfam PF04316 Anti-sigma-28 factor, FlgM 33 83 1.6E-14 T 01-11-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DOE78_22930 3058d23a85595cbf8c59f26e146c624b 87 SUPERFAMILY SSF101498 1 85 3.01E-19 T 01-11-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily DOE78_17530 de5cb181048d6081032b1a8ed4a2f640 340 SUPERFAMILY SSF48019 217 336 8.33E-26 T 01-11-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DOE78_17530 de5cb181048d6081032b1a8ed4a2f640 340 Pfam PF06144 DNA polymerase III, delta subunit 18 194 1.4E-48 T 01-11-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DOE78_17530 de5cb181048d6081032b1a8ed4a2f640 340 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 336 1.4E-90 T 01-11-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DOE78_17530 de5cb181048d6081032b1a8ed4a2f640 340 Gene3D G3DSA:1.20.272.10 216 339 1.6E-38 T 01-11-2018 DOE78_17530 de5cb181048d6081032b1a8ed4a2f640 340 Gene3D G3DSA:3.40.50.300 1 143 1.1E-40 T 01-11-2018 DOE78_17530 de5cb181048d6081032b1a8ed4a2f640 340 SUPERFAMILY SSF52540 3 214 2.22E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17530 de5cb181048d6081032b1a8ed4a2f640 340 Gene3D G3DSA:1.10.8.60 148 215 5.5E-14 T 01-11-2018 DOE78_09830 a1b8409cb9b3ca4a4680989ca26b6e76 136 Gene3D G3DSA:3.10.180.10 1 136 4.0E-40 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_09830 a1b8409cb9b3ca4a4680989ca26b6e76 136 SUPERFAMILY SSF54593 5 129 8.39E-20 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 Pfam PF00365 Phosphofructokinase 3 282 2.6E-67 T 01-11-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 Gene3D G3DSA:3.40.50.460 139 259 1.2E-69 T 01-11-2018 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 SUPERFAMILY SSF53784 1 321 9.03E-81 T 01-11-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 Gene3D G3DSA:3.40.50.450 3 294 1.2E-69 T 01-11-2018 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 117 134 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 156 172 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 209 221 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 174 191 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 135 153 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 247 269 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 90 106 7.7E-41 T 01-11-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DOE78_12745 24fba8c4070f75c4d9200780a83f592f 331 PIRSF PIRSF000532 1 331 3.6E-74 T 01-11-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DOE78_19080 ca2b533e71aee28bd23e21b700788a75 60 Pfam PF01381 Helix-turn-helix 1 46 1.4E-5 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_19080 ca2b533e71aee28bd23e21b700788a75 60 SUPERFAMILY SSF47413 1 49 1.77E-8 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_19080 ca2b533e71aee28bd23e21b700788a75 60 Gene3D G3DSA:1.10.260.40 1 60 2.6E-7 T 01-11-2018 DOE78_19000 dbe458263242d042b6faef5daae11058 779 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 31 666 2.3E-148 T 01-11-2018 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 DOE78_19000 dbe458263242d042b6faef5daae11058 779 Pfam PF02867 Ribonucleotide reductase, barrel domain 363 491 3.0E-10 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_19000 dbe458263242d042b6faef5daae11058 779 SUPERFAMILY SSF51998 26 750 3.43E-143 T 01-11-2018 DOE78_04985 3221b99759df7ef3314893052dce747e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 4.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_04985 3221b99759df7ef3314893052dce747e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 4.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_04985 3221b99759df7ef3314893052dce747e 242 SUPERFAMILY SSF64288 62 240 9.58E-40 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_04985 3221b99759df7ef3314893052dce747e 242 Gene3D G3DSA:1.10.10.10 1 75 1.0E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04985 3221b99759df7ef3314893052dce747e 242 SUPERFAMILY SSF46785 4 83 3.27E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04985 3221b99759df7ef3314893052dce747e 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.2E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_04985 3221b99759df7ef3314893052dce747e 242 SMART SM00345 15 74 2.9E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_04985 3221b99759df7ef3314893052dce747e 242 Gene3D G3DSA:3.40.1410.10 76 241 1.2E-31 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_04985 3221b99759df7ef3314893052dce747e 242 Pfam PF07702 UTRA domain 96 227 2.1E-28 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_04985 3221b99759df7ef3314893052dce747e 242 SMART SM00866 95 237 1.4E-23 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 SUPERFAMILY SSF56327 146 313 1.87E-58 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 315 1.7E-41 T 01-11-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 Gene3D G3DSA:3.40.50.720 1 147 6.7E-59 T 01-11-2018 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 6.6E-136 T 01-11-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 PIRSF PIRSF000102 2 318 7.6E-115 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 3.3E-50 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 3.3E-50 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 3.3E-50 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 3.3E-50 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 3.3E-50 T 01-11-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 SUPERFAMILY SSF51735 4 145 3.86E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_17150 df73944ce94f69c27b30128b381cded3 318 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 01-11-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 Gene3D G3DSA:3.90.110.10 148 318 5.8E-64 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 48.28 T 01-11-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DOE78_17150 df73944ce94f69c27b30128b381cded3 318 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 3.0E-49 T 01-11-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 Gene3D G3DSA:1.10.1740.10 5 108 2.2E-31 T 01-11-2018 DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 SUPERFAMILY SSF88946 8 97 5.18E-29 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 2.5E-36 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 Gene3D G3DSA:1.10.10.10 109 186 8.5E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 1.3E-102 T 01-11-2018 IPR014294 RNA polymerase sigma-W, bacillaceae DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 SUPERFAMILY SSF88659 117 185 2.06E-18 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 Pfam PF04542 Sigma-70 region 2 24 89 5.0E-21 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_01005 1d9f14c8a03cc8ed602c22d7a6f806fa 187 Pfam PF08281 Sigma-70, region 4 129 180 2.0E-16 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_07610 89d173386d19d32ee06cfc84870268f7 408 Gene3D G3DSA:3.40.50.620 1 146 3.0E-39 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_07610 89d173386d19d32ee06cfc84870268f7 408 SUPERFAMILY SSF52374 1 238 3.44E-19 T 01-11-2018 DOE78_07610 89d173386d19d32ee06cfc84870268f7 408 Hamap MF_01539 UPF0348 protein . 2 402 40.704 T 01-11-2018 IPR008513 Uncharacterised protein family UPF0348 DOE78_07610 89d173386d19d32ee06cfc84870268f7 408 Pfam PF05636 HIGH Nucleotidyl Transferase 1 387 5.9E-144 T 01-11-2018 IPR008513 Uncharacterised protein family UPF0348 DOE78_17825 2a1ba9775731fc4fa62937e28eaf3da8 131 Pfam PF12670 Protein of unknown function (DUF3792) 10 119 5.4E-24 T 01-11-2018 IPR023804 Protein of unknown function DUF3792, transmembrane DOE78_17825 2a1ba9775731fc4fa62937e28eaf3da8 131 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 10 122 1.7E-29 T 01-11-2018 IPR023804 Protein of unknown function DUF3792, transmembrane DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.8E-19 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 1.8E-19 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 45 1.8E-19 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.8E-19 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 SUPERFAMILY SSF46785 8 86 4.4E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 Pfam PF01022 Bacterial regulatory protein, arsR family 19 66 1.1E-16 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 Gene3D G3DSA:1.10.10.10 2 89 1.7E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22400 bbba9b153898b0892fc871aa696f05fd 99 SMART SM00418 12 91 7.1E-26 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_04550 68567aea7bf3e1e0752531449865db5e 252 Gene3D G3DSA:3.40.50.300 78 240 1.2E-12 T 01-11-2018 DOE78_04550 68567aea7bf3e1e0752531449865db5e 252 Gene3D G3DSA:3.40.50.300 29 73 1.2E-8 T 01-11-2018 DOE78_04550 68567aea7bf3e1e0752531449865db5e 252 SUPERFAMILY SSF52540 29 219 4.22E-27 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_04550 68567aea7bf3e1e0752531449865db5e 252 Pfam PF13476 AAA domain 34 97 6.4E-10 T 01-11-2018 IPR038729 Rad50/SbcC-type AAA domain DOE78_04550 68567aea7bf3e1e0752531449865db5e 252 SMART SM00382 42 220 2.5E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04550 68567aea7bf3e1e0752531449865db5e 252 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 159 207 2.8E-8 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_19355 916f2beeabb6cda1aeaac59f498fbe5d 236 Gene3D G3DSA:3.40.50.300 2 223 2.4E-51 T 01-11-2018 DOE78_19355 916f2beeabb6cda1aeaac59f498fbe5d 236 SMART SM00382 29 203 8.8E-8 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_19355 916f2beeabb6cda1aeaac59f498fbe5d 236 SUPERFAMILY SSF52540 17 214 6.84E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19355 916f2beeabb6cda1aeaac59f498fbe5d 236 Pfam PF00005 ABC transporter 21 153 1.3E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_19355 916f2beeabb6cda1aeaac59f498fbe5d 236 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_10845 7f9e0c69e1b7a239c988f64f9ccc7f7d 567 Gene3D G3DSA:1.20.1480.50 168 264 1.2E-8 T 01-11-2018 DOE78_10845 7f9e0c69e1b7a239c988f64f9ccc7f7d 567 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 177 6.8E-12 T 01-11-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DOE78_10845 7f9e0c69e1b7a239c988f64f9ccc7f7d 567 SUPERFAMILY SSF58104 234 565 1.57E-74 T 01-11-2018 DOE78_10845 7f9e0c69e1b7a239c988f64f9ccc7f7d 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 518 1.1E-52 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10845 7f9e0c69e1b7a239c988f64f9ccc7f7d 567 SMART SM00283 291 566 4.0E-85 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10845 7f9e0c69e1b7a239c988f64f9ccc7f7d 567 Gene3D G3DSA:1.10.287.950 265 566 2.8E-74 T 01-11-2018 DOE78_20145 9481547f21456c8d3ba4b1850342f791 145 Pfam PF02082 Transcriptional regulator 1 81 8.2E-22 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_20145 9481547f21456c8d3ba4b1850342f791 145 SUPERFAMILY SSF46785 3 137 4.43E-31 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20145 9481547f21456c8d3ba4b1850342f791 145 Gene3D G3DSA:1.10.10.10 1 143 1.5E-53 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17770 39b350c41fea9cb926971aed20b73365 426 Gene3D G3DSA:3.40.50.800 329 422 2.9E-26 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily DOE78_17770 39b350c41fea9cb926971aed20b73365 426 Gene3D G3DSA:3.30.930.10 2 324 1.8E-115 T 01-11-2018 DOE78_17770 39b350c41fea9cb926971aed20b73365 426 SUPERFAMILY SSF52954 328 418 3.62E-24 T 01-11-2018 DOE78_17770 39b350c41fea9cb926971aed20b73365 426 SUPERFAMILY SSF55681 4 318 1.91E-96 T 01-11-2018 DOE78_17770 39b350c41fea9cb926971aed20b73365 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 33.944 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DOE78_17770 39b350c41fea9cb926971aed20b73365 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 410 2.1E-155 T 01-11-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DOE78_17770 39b350c41fea9cb926971aed20b73365 426 Pfam PF03129 Anticodon binding domain 332 420 1.6E-15 T 01-11-2018 IPR004154 Anticodon-binding DOE78_17770 39b350c41fea9cb926971aed20b73365 426 PIRSF PIRSF001549 1 422 8.6E-117 T 01-11-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DOE78_17770 39b350c41fea9cb926971aed20b73365 426 Pfam PF13393 Histidyl-tRNA synthetase 8 312 1.2E-46 T 01-11-2018 DOE78_11485 d98c801584a193e779b4c8abf603499b 368 Pfam PF14072 DNA-sulfur modification-associated 9 346 1.0E-105 T 01-11-2018 IPR017642 DNA sulphur modification protein DndB DOE78_11485 d98c801584a193e779b4c8abf603499b 368 TIGRFAM TIGR03187 DGQHR: DGQHR domain 11 287 9.0E-74 T 01-11-2018 IPR017601 DGQHR-containing domain DOE78_11485 d98c801584a193e779b4c8abf603499b 368 TIGRFAM TIGR03233 DNA_S_dndB: DNA sulfur modification protein DndB 5 359 1.2E-156 T 01-11-2018 IPR017642 DNA sulphur modification protein DndB DOE78_09860 18a3ea7817ed7275228d32fd6e16289d 325 Pfam PF13276 HTH-like domain 77 127 2.4E-19 T 01-11-2018 IPR025948 HTH-like domain DOE78_09860 18a3ea7817ed7275228d32fd6e16289d 325 Pfam PF13333 Integrase core domain 266 320 1.4E-19 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 DOE78_09860 18a3ea7817ed7275228d32fd6e16289d 325 SUPERFAMILY SSF53098 153 315 8.35E-26 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_08255 0f930a79af68aedf9ee2bcb60ae736f6 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 252 1.3E-69 T 01-11-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 DOE78_08255 0f930a79af68aedf9ee2bcb60ae736f6 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 1.8E-28 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DOE78_08255 0f930a79af68aedf9ee2bcb60ae736f6 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 74 93 1.8E-28 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DOE78_08255 0f930a79af68aedf9ee2bcb60ae736f6 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 1.8E-28 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DOE78_08255 0f930a79af68aedf9ee2bcb60ae736f6 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 1.8E-28 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DOE78_08255 0f930a79af68aedf9ee2bcb60ae736f6 258 Pfam PF01311 Bacterial export proteins, family 1 9 244 5.4E-71 T 01-11-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DOE78_16975 70ba0e2e2aa4cb8ab049c87ddec5f23e 124 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 124 2.0E-10 T 01-11-2018 DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 5.3E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 5.3E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 5.3E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 1.3E-58 T 01-11-2018 DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 SUPERFAMILY SSF51735 7 257 9.72E-78 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.1E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.1E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.1E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.1E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.1E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_13035 f5be5b36616d7bfe2cde5b6544093717 258 Gene3D G3DSA:3.40.50.720 2 258 4.9E-72 T 01-11-2018 DOE78_06860 08ad5cdc3f9a56fe70c8f9f83f490394 424 Gene3D G3DSA:3.30.360.10 135 340 1.4E-105 T 01-11-2018 DOE78_06860 08ad5cdc3f9a56fe70c8f9f83f490394 424 Pfam PF00742 Homoserine dehydrogenase 136 314 2.3E-53 T 01-11-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DOE78_06860 08ad5cdc3f9a56fe70c8f9f83f490394 424 Gene3D G3DSA:3.40.50.720 4 337 1.4E-105 T 01-11-2018 DOE78_06860 08ad5cdc3f9a56fe70c8f9f83f490394 424 SUPERFAMILY SSF55347 136 301 3.66E-44 T 01-11-2018 DOE78_06860 08ad5cdc3f9a56fe70c8f9f83f490394 424 SUPERFAMILY SSF51735 1 157 1.15E-24 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_06860 08ad5cdc3f9a56fe70c8f9f83f490394 424 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 182 204 - T 01-11-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DOE78_06860 08ad5cdc3f9a56fe70c8f9f83f490394 424 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 123 2.0E-10 T 01-11-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DOE78_12820 e9c3e9553c448c656d6b2530f15ee5ce 233 SUPERFAMILY SSF53790 1 232 1.96E-46 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_12820 e9c3e9553c448c656d6b2530f15ee5ce 233 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 214 3.5E-49 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_12820 e9c3e9553c448c656d6b2530f15ee5ce 233 Gene3D G3DSA:3.40.1010.10 1 132 1.0E-37 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_12820 e9c3e9553c448c656d6b2530f15ee5ce 233 PIRSF PIRSF036427 1 233 3.1E-77 T 01-11-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 DOE78_12820 e9c3e9553c448c656d6b2530f15ee5ce 233 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 233 1.1E-84 T 01-11-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 DOE78_12820 e9c3e9553c448c656d6b2530f15ee5ce 233 Gene3D G3DSA:3.30.950.10 133 233 7.5E-13 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 SUPERFAMILY SSF55785 246 351 8.17E-7 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 SMART SM00267 343 516 2.2E-61 T 01-11-2018 IPR000160 GGDEF domain DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 Gene3D G3DSA:3.30.450.20 237 344 6.0E-10 T 01-11-2018 DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 SUPERFAMILY SSF55073 359 516 1.02E-45 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 Gene3D G3DSA:3.30.70.270 345 518 2.0E-54 T 01-11-2018 DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 512 3.6E-44 T 01-11-2018 IPR000160 GGDEF domain DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 515 4.5E-47 T 01-11-2018 IPR000160 GGDEF domain DOE78_11310 e2f482552a4ebb37d8555dbd5f6886cc 524 Pfam PF16927 N-terminal 7TM region of histidine kinase 13 234 6.1E-45 T 01-11-2018 IPR031621 Histidine kinase, N-terminal 7TM region DOE78_04385 8994eb5540295bea5bbc60b876d27b09 407 Gene3D G3DSA:3.40.50.1970 17 180 9.1E-33 T 01-11-2018 DOE78_04385 8994eb5540295bea5bbc60b876d27b09 407 SUPERFAMILY SSF56796 27 398 2.88E-53 T 01-11-2018 DOE78_04385 8994eb5540295bea5bbc60b876d27b09 407 Pfam PF13685 Iron-containing alcohol dehydrogenase 30 296 7.4E-76 T 01-11-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 DOE78_10965 353a18e2df089655e1976755718c3e54 569 Gene3D G3DSA:3.40.50.1820 35 539 5.4E-113 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10965 353a18e2df089655e1976755718c3e54 569 Pfam PF00135 Carboxylesterase family 38 523 9.1E-90 T 01-11-2018 IPR002018 Carboxylesterase, type B DOE78_10965 353a18e2df089655e1976755718c3e54 569 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 225 240 - T 01-11-2018 IPR019826 Carboxylesterase type B, active site DOE78_10965 353a18e2df089655e1976755718c3e54 569 SUPERFAMILY SSF53474 38 525 1.52E-93 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_07940 6a379db8ff6e3d199372effbdf17710b 253 Pfam PF13672 Protein phosphatase 2C 13 210 1.1E-21 T 01-11-2018 DOE78_07940 6a379db8ff6e3d199372effbdf17710b 253 Gene3D G3DSA:3.60.40.10 1 244 1.1E-73 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_07940 6a379db8ff6e3d199372effbdf17710b 253 SMART SM00331 7 242 9.0E-51 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_07940 6a379db8ff6e3d199372effbdf17710b 253 SMART SM00332 1 240 1.0E-24 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_07940 6a379db8ff6e3d199372effbdf17710b 253 SUPERFAMILY SSF81606 3 242 3.92E-67 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_01955 bab74fe211868db50df50c35c07f5b1e 141 PIRSF PIRSF034303 1 134 3.8E-43 T 01-11-2018 IPR012543 Protein of unknown function DUF1694 DOE78_01955 bab74fe211868db50df50c35c07f5b1e 141 Gene3D G3DSA:3.30.1330.30 2 129 1.2E-44 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_01955 bab74fe211868db50df50c35c07f5b1e 141 SUPERFAMILY SSF160515 4 122 2.62E-41 T 01-11-2018 DOE78_01955 bab74fe211868db50df50c35c07f5b1e 141 Pfam PF07997 Protein of unknown function (DUF1694) 4 117 1.9E-39 T 01-11-2018 IPR012543 Protein of unknown function DUF1694 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 Gene3D G3DSA:3.20.70.20 65 755 3.5E-198 T 01-11-2018 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 215 744 2.8E-135 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 617 639 - T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 449 460 5.2E-38 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 501 524 5.2E-38 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 290 309 5.2E-38 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 628 655 5.2E-38 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 561 5.2E-38 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 567 590 5.2E-38 T 01-11-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 SUPERFAMILY SSF51998 214 759 2.14E-155 T 01-11-2018 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 134 210 1.3E-18 T 01-11-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 SUPERFAMILY SSF48168 40 213 4.71E-55 T 01-11-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_02870 685ff0ab2ded54927981822276674ce9 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 138 747 3.7E-163 T 01-11-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DOE78_23100 3793faabcf9a09d93fdb8d2b27313ff9 465 Pfam PF01050 Mannose-6-phosphate isomerase 298 442 1.1E-16 T 01-11-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 DOE78_23100 3793faabcf9a09d93fdb8d2b27313ff9 465 SUPERFAMILY SSF51182 190 431 4.32E-32 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_23100 3793faabcf9a09d93fdb8d2b27313ff9 465 Gene3D G3DSA:2.60.120.10 330 440 1.2E-15 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_23100 3793faabcf9a09d93fdb8d2b27313ff9 465 SUPERFAMILY SSF53448 1 265 6.56E-49 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_23100 3793faabcf9a09d93fdb8d2b27313ff9 465 Pfam PF00483 Nucleotidyl transferase 4 267 1.5E-33 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_23100 3793faabcf9a09d93fdb8d2b27313ff9 465 Gene3D G3DSA:3.90.550.10 1 329 1.1E-86 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09685 0ea8349df6f5da8e0987d14bad2f5170 262 Pfam PF00535 Glycosyl transferase family 2 7 141 6.0E-33 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09685 0ea8349df6f5da8e0987d14bad2f5170 262 SUPERFAMILY SSF53448 7 229 2.2E-52 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09685 0ea8349df6f5da8e0987d14bad2f5170 262 Gene3D G3DSA:3.90.550.10 3 251 1.6E-53 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 1.4E-29 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 SUPERFAMILY SSF51735 138 288 8.54E-27 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 SMART SM00829 7 324 3.6E-4 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 SUPERFAMILY SSF50129 2 170 1.34E-43 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 Gene3D G3DSA:3.90.180.10 9 311 4.6E-81 T 01-11-2018 DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 Gene3D G3DSA:3.40.50.720 148 272 4.6E-81 T 01-11-2018 DOE78_14165 627cb29af85968d98b07d9a555a1bc92 331 Pfam PF00107 Zinc-binding dehydrogenase 173 287 1.6E-16 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_24225 8ded344f7827ae2a4a975ee26f6ba3d0 241 Gene3D G3DSA:2.40.50.40 134 202 3.3E-12 T 01-11-2018 DOE78_24225 8ded344f7827ae2a4a975ee26f6ba3d0 241 SMART SM00448 5 116 5.1E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_24225 8ded344f7827ae2a4a975ee26f6ba3d0 241 Pfam PF00072 Response regulator receiver domain 7 116 1.9E-26 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_24225 8ded344f7827ae2a4a975ee26f6ba3d0 241 SMART SM00850 142 240 2.3E-35 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_24225 8ded344f7827ae2a4a975ee26f6ba3d0 241 Gene3D G3DSA:3.40.50.2300 4 133 4.6E-37 T 01-11-2018 DOE78_24225 8ded344f7827ae2a4a975ee26f6ba3d0 241 Pfam PF04397 LytTr DNA-binding domain 143 239 5.1E-27 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_24225 8ded344f7827ae2a4a975ee26f6ba3d0 241 SUPERFAMILY SSF52172 5 164 4.98E-37 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_08530 403346d4cd77da32fcf3ccc420b092a7 85 Pfam PF11588 Protein of unknown function (DUF3243) 3 80 1.0E-34 T 01-11-2018 IPR021637 Protein of unknown function DUF3243 DOE78_08530 403346d4cd77da32fcf3ccc420b092a7 85 Gene3D G3DSA:1.10.760.20 1 82 5.7E-31 T 01-11-2018 IPR038292 YmfJ/YflH superfamily DOE78_08530 403346d4cd77da32fcf3ccc420b092a7 85 PIRSF PIRSF004764 1 85 1.8E-29 T 01-11-2018 IPR024702 Uncharacterised conserved protein YmfJ DOE78_05120 b087581a6b63d5c4d2e4467bb1dcb2ee 265 Gene3D G3DSA:1.10.10.10 158 216 1.7E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05120 b087581a6b63d5c4d2e4467bb1dcb2ee 265 Gene3D G3DSA:1.10.10.10 217 265 1.8E-13 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05120 b087581a6b63d5c4d2e4467bb1dcb2ee 265 Pfam PF02631 RecX family 207 263 7.8E-5 T 01-11-2018 IPR003783 Regulatory protein RecX GO:0006282 DOE78_05120 b087581a6b63d5c4d2e4467bb1dcb2ee 265 Pfam PF02631 RecX family 88 210 3.4E-27 T 01-11-2018 IPR003783 Regulatory protein RecX GO:0006282 DOE78_05120 b087581a6b63d5c4d2e4467bb1dcb2ee 265 Hamap MF_01114 Regulatory protein RecX [recX]. 46 213 16.541 T 01-11-2018 IPR003783 Regulatory protein RecX GO:0006282 DOE78_05120 b087581a6b63d5c4d2e4467bb1dcb2ee 265 Gene3D G3DSA:1.10.10.2800 1 111 3.6E-35 T 01-11-2018 DOE78_05120 b087581a6b63d5c4d2e4467bb1dcb2ee 265 Gene3D G3DSA:1.10.10.10 112 156 2.3E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09495 5cd74a17f2e1f00518f3aa6355ca5d00 292 Pfam PF07859 alpha/beta hydrolase fold 55 261 5.6E-75 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DOE78_09495 5cd74a17f2e1f00518f3aa6355ca5d00 292 SUPERFAMILY SSF53474 6 283 6.51E-74 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_09495 5cd74a17f2e1f00518f3aa6355ca5d00 292 Gene3D G3DSA:3.40.50.1820 2 291 1.2E-90 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06615 f5d05610dba3d6d1805c75d7dd0490d3 346 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 297 2.3E-14 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_06615 f5d05610dba3d6d1805c75d7dd0490d3 346 SUPERFAMILY SSF52540 32 315 1.45E-76 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06615 f5d05610dba3d6d1805c75d7dd0490d3 346 Pfam PF00005 ABC transporter 26 183 8.5E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06615 f5d05610dba3d6d1805c75d7dd0490d3 346 Gene3D G3DSA:3.40.50.300 1 327 2.4E-102 T 01-11-2018 DOE78_06615 f5d05610dba3d6d1805c75d7dd0490d3 346 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_06615 f5d05610dba3d6d1805c75d7dd0490d3 346 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 318 4.4E-20 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_06615 f5d05610dba3d6d1805c75d7dd0490d3 346 SMART SM00382 33 241 6.5E-19 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04980 09f4df61a6107ec33bad1f1e7215fc04 273 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 222 235 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_04980 09f4df61a6107ec33bad1f1e7215fc04 273 Gene3D G3DSA:3.40.1190.20 1 267 1.4E-48 T 01-11-2018 IPR029056 Ribokinase-like DOE78_04980 09f4df61a6107ec33bad1f1e7215fc04 273 SUPERFAMILY SSF53613 1 265 1.36E-50 T 01-11-2018 IPR029056 Ribokinase-like DOE78_04980 09f4df61a6107ec33bad1f1e7215fc04 273 Pfam PF00294 pfkB family carbohydrate kinase 13 264 1.6E-38 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_14780 49a1c174d25c94ed38573235ccaebacb 372 Gene3D G3DSA:3.90.340.10 14 362 1.6E-151 T 01-11-2018 DOE78_14780 49a1c174d25c94ed38573235ccaebacb 372 PIRSF PIRSF037219 9 372 4.3E-179 T 01-11-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 DOE78_14780 49a1c174d25c94ed38573235ccaebacb 372 Gene3D G3DSA:3.90.440.10 91 200 1.6E-151 T 01-11-2018 DOE78_14780 49a1c174d25c94ed38573235ccaebacb 372 Pfam PF02898 Nitric oxide synthase, oxygenase domain 13 369 1.4E-167 T 01-11-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 DOE78_14780 49a1c174d25c94ed38573235ccaebacb 372 SUPERFAMILY SSF56512 10 370 2.09E-164 T 01-11-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 DOE78_14780 49a1c174d25c94ed38573235ccaebacb 372 Gene3D G3DSA:3.90.1230.10 201 307 1.6E-151 T 01-11-2018 DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 SUPERFAMILY SSF109604 155 341 4.08E-37 T 01-11-2018 DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 Gene3D G3DSA:1.10.3210.10 150 353 8.0E-69 T 01-11-2018 DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 SMART SM00471 172 310 0.0027 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 Gene3D G3DSA:3.40.50.2300 1 142 1.7E-30 T 01-11-2018 DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 Pfam PF00072 Response regulator receiver domain 11 123 1.8E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 SMART SM00448 9 123 8.8E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 Pfam PF01966 HD domain 179 300 7.1E-15 T 01-11-2018 IPR006674 HD domain DOE78_21515 dc38c8ddfd9c8e3d58b24754186fc641 361 SUPERFAMILY SSF52172 10 161 8.68E-33 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 Hamap MF_00163 Peptide deformylase [def]. 2 158 27.673 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 PRINTS PR01576 Peptide deformylase signature 100 118 7.5E-33 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 PRINTS PR01576 Peptide deformylase signature 88 99 7.5E-33 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 PRINTS PR01576 Peptide deformylase signature 33 62 7.5E-33 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 PRINTS PR01576 Peptide deformylase signature 119 148 7.5E-33 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 PIRSF PIRSF004749 1 160 7.6E-46 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 155 3.6E-51 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 Pfam PF01327 Polypeptide deformylase 3 147 4.6E-46 T 01-11-2018 IPR023635 Peptide deformylase DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 Gene3D G3DSA:3.90.45.10 1 156 4.2E-57 T 01-11-2018 IPR036821 Peptide deformylase superfamily DOE78_07920 b740461be6a2d9d60d54748ddac37b75 161 SUPERFAMILY SSF56420 3 151 1.83E-51 T 01-11-2018 IPR036821 Peptide deformylase superfamily DOE78_24350 77b7e70d97e0fd1e4a2183ab18fb9e7e 97 Gene3D G3DSA:3.30.70.100 1 97 1.5E-19 T 01-11-2018 DOE78_24350 77b7e70d97e0fd1e4a2183ab18fb9e7e 97 Pfam PF07876 Stress responsive A/B Barrel Domain 2 86 1.5E-16 T 01-11-2018 IPR013097 Stress responsive alpha-beta barrel DOE78_24350 77b7e70d97e0fd1e4a2183ab18fb9e7e 97 SUPERFAMILY SSF54909 1 84 1.8E-15 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_24350 77b7e70d97e0fd1e4a2183ab18fb9e7e 97 SMART SM00886 2 97 3.5E-15 T 01-11-2018 IPR013097 Stress responsive alpha-beta barrel DOE78_24660 52b067813863478c4d76f521c54e2ed0 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 59 6.5E-30 T 01-11-2018 IPR009296 Protein of unknown function DUF951 DOE78_24660 52b067813863478c4d76f521c54e2ed0 65 PIRSF PIRSF037263 1 65 1.2E-34 T 01-11-2018 IPR009296 Protein of unknown function DUF951 DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 Gene3D G3DSA:3.90.1150.10 314 405 1.4E-6 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 403 459 1.2E-10 T 01-11-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 SUPERFAMILY SSF53383 6 383 9.82E-97 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 Gene3D G3DSA:3.90.105.10 419 474 2.3E-18 T 01-11-2018 DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 221 235 - T 01-11-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 SUPERFAMILY SSF55904 341 486 6.67E-40 T 01-11-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 Gene3D G3DSA:3.40.640.10 6 283 1.4E-94 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_07380 ce9975dc30ada81124a194b7a48b39d0 489 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 370 2.2E-114 T 01-11-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DOE78_02850 fde2b68bca94b10571ffd8fe3613b90e 225 SMART SM00448 1 113 1.6E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02850 fde2b68bca94b10571ffd8fe3613b90e 225 Gene3D G3DSA:1.10.10.10 124 225 4.8E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02850 fde2b68bca94b10571ffd8fe3613b90e 225 SUPERFAMILY SSF52172 2 178 2.26E-37 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_02850 fde2b68bca94b10571ffd8fe3613b90e 225 Gene3D G3DSA:3.40.50.2300 1 123 4.4E-33 T 01-11-2018 DOE78_02850 fde2b68bca94b10571ffd8fe3613b90e 225 SMART SM00862 146 223 3.6E-26 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_02850 fde2b68bca94b10571ffd8fe3613b90e 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 2.0E-24 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_02850 fde2b68bca94b10571ffd8fe3613b90e 225 Pfam PF00072 Response regulator receiver domain 3 114 2.0E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 497 1.2E-230 T 01-11-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 SUPERFAMILY SSF110921 395 499 1.83E-20 T 01-11-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 SUPERFAMILY SSF51569 2 290 2.38E-93 T 01-11-2018 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 Gene3D G3DSA:3.30.160.270 392 500 1.0E-12 T 01-11-2018 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 SMART SM00917 368 500 1.1E-35 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 Pfam PF00682 HMGL-like 3 272 1.2E-93 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 507 42.586 T 01-11-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 01-11-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 Gene3D G3DSA:1.10.238.260 279 391 7.5E-39 T 01-11-2018 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 Pfam PF08502 LeuA allosteric (dimerisation) domain 368 499 2.7E-36 T 01-11-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DOE78_18115 73fff34278c930fce668f2fb8ab24ab0 507 Gene3D G3DSA:3.20.20.70 1 275 1.1E-111 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12895 821302bb9b6678c797a2c93fea703441 104 SUPERFAMILY SSF103481 6 102 4.32E-18 T 01-11-2018 DOE78_12895 821302bb9b6678c797a2c93fea703441 104 Gene3D G3DSA:1.10.3730.20 1 104 1.5E-26 T 01-11-2018 DOE78_12895 821302bb9b6678c797a2c93fea703441 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.3E-26 T 01-11-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DOE78_23780 1abba5e6791279749d7dde9cb039bc98 223 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 4 169 1.4E-62 T 01-11-2018 IPR014202 Sporulation stage II, protein R DOE78_23780 1abba5e6791279749d7dde9cb039bc98 223 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 39 164 3.4E-47 T 01-11-2018 IPR014202 Sporulation stage II, protein R DOE78_13770 08e8adb942c0c1206e84d2b93ef1a185 337 Gene3D G3DSA:3.50.30.60 160 335 1.2E-35 T 01-11-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DOE78_13770 08e8adb942c0c1206e84d2b93ef1a185 337 SUPERFAMILY SSF141986 173 328 2.35E-30 T 01-11-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DOE78_13770 08e8adb942c0c1206e84d2b93ef1a185 337 Gene3D G3DSA:3.40.50.10740 4 159 6.3E-35 T 01-11-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DOE78_13770 08e8adb942c0c1206e84d2b93ef1a185 337 SUPERFAMILY SSF52317 1 162 1.33E-37 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_13770 08e8adb942c0c1206e84d2b93ef1a185 337 PIRSF PIRSF028757 1 336 6.5E-64 T 01-11-2018 IPR003507 Peptidase family S66 DOE78_13770 08e8adb942c0c1206e84d2b93ef1a185 337 Pfam PF02016 LD-carboxypeptidase 13 322 7.2E-69 T 01-11-2018 IPR003507 Peptidase family S66 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 Pfam PF00072 Response regulator receiver domain 4 113 3.2E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 SMART SM00421 135 192 3.8E-22 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 SUPERFAMILY SSF46894 122 198 1.09E-20 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 SUPERFAMILY SSF52172 1 129 1.71E-28 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 SMART SM00448 2 113 2.9E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 Gene3D G3DSA:3.40.50.12740 2 196 1.4E-60 T 01-11-2018 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.8E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.8E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.8E-13 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14315 592cf3e68bcab48af4005e0fa6dabc94 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 189 5.8E-20 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 Pfam PF00155 Aminotransferase class I and II 118 469 7.2E-38 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.2E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 SUPERFAMILY SSF46785 10 78 4.09E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 Gene3D G3DSA:1.10.10.10 4 77 5.9E-22 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 SUPERFAMILY SSF53383 107 473 5.3E-89 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.5E-5 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.5E-5 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 SMART SM00345 17 76 3.6E-13 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 Gene3D G3DSA:3.90.1150.10 115 472 8.8E-103 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_14035 24f38e8ed8280d5b86d5351afd814343 479 Gene3D G3DSA:3.40.640.10 151 372 8.8E-103 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_15885 161be5fd9f555cd26fe22d938a369548 202 Pfam PF03838 Recombination protein U 32 197 3.6E-67 T 01-11-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DOE78_15885 161be5fd9f555cd26fe22d938a369548 202 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 202 96.528 T 01-11-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DOE78_15885 161be5fd9f555cd26fe22d938a369548 202 PIRSF PIRSF037785 24 202 1.1E-77 T 01-11-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DOE78_15885 161be5fd9f555cd26fe22d938a369548 202 Gene3D G3DSA:3.40.1350.10 35 202 5.3E-67 T 01-11-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DOE78_15885 161be5fd9f555cd26fe22d938a369548 202 TIGRFAM TIGR00648 recU: recombination protein U 31 198 3.7E-79 T 01-11-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DOE78_15885 161be5fd9f555cd26fe22d938a369548 202 SUPERFAMILY SSF52980 34 200 4.56E-68 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DOE78_17185 9933da6045f1a733446476cbb8b06cf7 162 Pfam PF16258 Domain of unknown function (DUF4912) 23 121 2.4E-11 T 01-11-2018 IPR032585 Protein of unknown function DUF4912 DOE78_05360 6848dbd0c24f356cfd8fe4395349edcd 132 SUPERFAMILY SSF54427 10 121 1.32E-15 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_05360 6848dbd0c24f356cfd8fe4395349edcd 132 Gene3D G3DSA:3.10.450.50 10 132 1.4E-25 T 01-11-2018 DOE78_05360 6848dbd0c24f356cfd8fe4395349edcd 132 Pfam PF12680 SnoaL-like domain 20 114 4.8E-7 T 01-11-2018 IPR037401 SnoaL-like domain DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 01-11-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 Gene3D G3DSA:3.40.50.1260 169 383 1.0E-166 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PIRSF PIRSF000724 1 394 2.7E-162 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 43.269 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 Pfam PF00162 Phosphoglycerate kinase 6 383 1.4E-167 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.0E-99 T 01-11-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 SUPERFAMILY SSF53748 1 393 2.12E-164 T 01-11-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_22085 fed4d32953d5d4102db2b195122799cf 394 Gene3D G3DSA:3.40.50.1260 7 391 1.0E-166 T 01-11-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 2.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.0E-33 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 SUPERFAMILY SSF51735 4 236 8.72E-77 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 236 4.8E-67 T 01-11-2018 DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 Gene3D G3DSA:3.40.50.720 2 243 5.7E-76 T 01-11-2018 DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 5.3E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.3E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07155 0304f167b5da56b097f0ef49f801cfd3 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 5.3E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_18925 cb7a69b9f940a55fb2b7106f6adc28c6 302 SUPERFAMILY SSF52402 1 213 3.53E-5 T 01-11-2018 DOE78_18925 cb7a69b9f940a55fb2b7106f6adc28c6 302 Gene3D G3DSA:3.40.50.620 1 224 4.6E-7 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_23020 62bf83f6acd97b96624b9900369c98eb 347 Gene3D G3DSA:3.40.50.2000 109 216 8.0E-32 T 01-11-2018 DOE78_23020 62bf83f6acd97b96624b9900369c98eb 347 Pfam PF00534 Glycosyl transferases group 1 229 346 4.3E-18 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23020 62bf83f6acd97b96624b9900369c98eb 347 Gene3D G3DSA:3.40.50.2000 217 346 8.0E-32 T 01-11-2018 DOE78_23020 62bf83f6acd97b96624b9900369c98eb 347 SUPERFAMILY SSF53756 86 345 3.87E-32 T 01-11-2018 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 Gene3D G3DSA:1.20.1270.20 1 143 5.6E-41 T 01-11-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 SUPERFAMILY SSF56821 1 545 4.84E-204 T 01-11-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 Hamap MF_00069 Hydroxylamine reductase [hcp]. 3 548 23.131 T 01-11-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 Pfam PF03063 Prismane/CO dehydrogenase family 3 543 1.4E-179 T 01-11-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 PIRSF PIRSF000076 3 549 8.3E-265 T 01-11-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 Gene3D G3DSA:3.40.50.2030 378 547 7.2E-65 T 01-11-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 3 546 6.7E-229 T 01-11-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 Gene3D G3DSA:1.20.1270.20 144 227 1.4E-31 T 01-11-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_11725 aba72aa38dc53650c0faf31b5e16d77e 552 Gene3D G3DSA:3.40.50.2030 229 377 1.7E-67 T 01-11-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DOE78_15480 75bfe0d54b720caaaeb42573939d616d 316 Pfam PF03193 RsgA GTPase 52 227 8.4E-49 T 01-11-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DOE78_15480 75bfe0d54b720caaaeb42573939d616d 316 Gene3D G3DSA:3.40.50.300 55 226 1.7E-47 T 01-11-2018 DOE78_15480 75bfe0d54b720caaaeb42573939d616d 316 SUPERFAMILY SSF50249 1 56 5.05E-6 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_15480 75bfe0d54b720caaaeb42573939d616d 316 Gene3D G3DSA:1.10.40.50 230 301 1.3E-19 T 01-11-2018 DOE78_15480 75bfe0d54b720caaaeb42573939d616d 316 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 7 290 31.712 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DOE78_15480 75bfe0d54b720caaaeb42573939d616d 316 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 32 282 1.2E-49 T 01-11-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DOE78_15480 75bfe0d54b720caaaeb42573939d616d 316 SUPERFAMILY SSF52540 69 289 1.01E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05520 e38e3e9c32fe7f21e04ed1aa5f9203fc 130 ProDom PD081567 YHCU 1 107 1.0E-13 T 01-11-2018 IPR020355 Uncharacterised protein family YhcU DOE78_05520 e38e3e9c32fe7f21e04ed1aa5f9203fc 130 Pfam PF17326 Family of unknown function (DUF5365) 1 111 2.0E-39 T 01-11-2018 IPR020355 Uncharacterised protein family YhcU DOE78_16435 52ae5506c981cf2055610811d9316bea 434 SMART SM00941 345 418 7.3E-29 T 01-11-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 1.4E-179 T 01-11-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 SUPERFAMILY SSF47648 1 69 3.53E-23 T 01-11-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 PIRSF PIRSF000478 1 433 4.8E-167 T 01-11-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 6.0E-23 T 01-11-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 SUPERFAMILY SSF54680 331 433 4.32E-27 T 01-11-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 SUPERFAMILY SSF52418 69 329 4.06E-92 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 Gene3D G3DSA:3.40.1030.10 77 330 4.6E-152 T 01-11-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 Gene3D G3DSA:3.90.1170.30 331 420 4.6E-152 T 01-11-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 01-11-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 2.7E-47 T 01-11-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 Gene3D G3DSA:1.20.970.10 1 67 1.5E-30 T 01-11-2018 DOE78_16435 52ae5506c981cf2055610811d9316bea 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 417 3.0E-24 T 01-11-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 Gene3D G3DSA:3.40.50.300 1 279 1.4E-72 T 01-11-2018 DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 Pfam PF16326 ABC transporter C-terminal domain 553 619 5.8E-13 T 01-11-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 SMART SM00382 342 512 2.0E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 SMART SM00382 26 229 5.5E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 SUPERFAMILY SSF52540 2 239 2.57E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 Pfam PF12848 ABC transporter 224 293 8.7E-16 T 01-11-2018 IPR032781 ABC-transporter extension domain DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 Gene3D G3DSA:3.40.50.300 280 555 7.4E-59 T 01-11-2018 DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 Pfam PF00005 ABC transporter 333 468 1.0E-20 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 Pfam PF00005 ABC transporter 18 185 2.6E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_15580 a17a3e4a52e59ea515b10f58199bdbf5 624 SUPERFAMILY SSF52540 313 517 3.84E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05795 592fc34eacc017123f0be9058e6de9e9 456 Gene3D G3DSA:3.30.470.20 313 434 1.1E-6 T 01-11-2018 DOE78_05795 592fc34eacc017123f0be9058e6de9e9 456 SUPERFAMILY SSF56059 212 417 3.81E-11 T 01-11-2018 DOE78_05795 592fc34eacc017123f0be9058e6de9e9 456 Pfam PF14398 YheC/D like ATP-grasp 188 443 1.9E-78 T 01-11-2018 IPR026838 Endospore coat-associated protein YheC/D DOE78_16420 8860513e76047564622886e177372384 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 36.947 T 01-11-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DOE78_16420 8860513e76047564622886e177372384 146 SUPERFAMILY SSF55874 28 135 1.44E-23 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_16420 8860513e76047564622886e177372384 146 Pfam PF13581 Histidine kinase-like ATPase domain 11 136 8.1E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_16420 8860513e76047564622886e177372384 146 SMART SM00387 35 140 1.7E-10 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_16420 8860513e76047564622886e177372384 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 1.6E-69 T 01-11-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DOE78_16420 8860513e76047564622886e177372384 146 Gene3D G3DSA:3.30.565.10 1 143 5.1E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 Pfam PF03990 Domain of unknown function (DUF348) 104 137 2.8E-9 T 01-11-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 Pfam PF03990 Domain of unknown function (DUF348) 157 195 8.1E-9 T 01-11-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 Pfam PF03990 Domain of unknown function (DUF348) 40 78 1.6E-8 T 01-11-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 SMART SM01208 208 286 3.0E-25 T 01-11-2018 IPR011098 G5 domain DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 Pfam PF07501 G5 domain 213 285 1.6E-21 T 01-11-2018 IPR011098 G5 domain DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 Gene3D G3DSA:2.40.40.10 278 387 3.4E-5 T 01-11-2018 IPR036908 RlpA-like domain superfamily DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 Pfam PF06725 3D domain 333 394 5.4E-23 T 01-11-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 SUPERFAMILY SSF50685 335 383 5.93E-9 T 01-11-2018 IPR036908 RlpA-like domain superfamily DOE78_00250 81cf61fe1e236b37aafa316719a571e3 394 Gene3D G3DSA:2.20.230.10 207 277 1.9E-13 T 01-11-2018 DOE78_19340 4ac3729604b54eda69ba83f9abd18f2a 284 Pfam PF01063 Amino-transferase class IV 30 251 9.4E-49 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DOE78_19340 4ac3729604b54eda69ba83f9abd18f2a 284 SUPERFAMILY SSF56752 3 274 6.02E-81 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DOE78_19340 4ac3729604b54eda69ba83f9abd18f2a 284 Gene3D G3DSA:3.20.10.10 121 282 6.2E-57 T 01-11-2018 DOE78_19340 4ac3729604b54eda69ba83f9abd18f2a 284 Gene3D G3DSA:3.30.470.10 1 117 1.5E-34 T 01-11-2018 DOE78_19340 4ac3729604b54eda69ba83f9abd18f2a 284 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 3 276 2.9E-123 T 01-11-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 DOE78_18800 60f540a1588dbeb878dffb9b92668d95 658 Pfam PF06605 Prophage endopeptidase tail 28 328 9.3E-62 T 01-11-2018 IPR010572 Prophage tail endopeptidase DOE78_18800 60f540a1588dbeb878dffb9b92668d95 658 Gene3D G3DSA:2.40.10.280 2 83 1.3E-11 T 01-11-2018 DOE78_18800 60f540a1588dbeb878dffb9b92668d95 658 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 61 306 2.6E-16 T 01-11-2018 IPR007119 Phage minor structural protein, N-terminal domain DOE78_18800 60f540a1588dbeb878dffb9b92668d95 658 Gene3D G3DSA:3.55.50.40 84 168 1.6E-15 T 01-11-2018 DOE78_07605 e6b4787bd87788b2e8719d3899cabd10 342 Gene3D G3DSA:2.30.42.10 124 220 5.6E-29 T 01-11-2018 DOE78_07605 e6b4787bd87788b2e8719d3899cabd10 342 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 232 331 3.8E-7 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DOE78_07605 e6b4787bd87788b2e8719d3899cabd10 342 Pfam PF13180 PDZ domain 128 196 6.7E-14 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_07605 e6b4787bd87788b2e8719d3899cabd10 342 Gene3D G3DSA:3.30.230.10 221 342 8.7E-12 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_07605 e6b4787bd87788b2e8719d3899cabd10 342 SUPERFAMILY SSF54211 229 334 2.58E-17 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_07605 e6b4787bd87788b2e8719d3899cabd10 342 SUPERFAMILY SSF50156 129 208 5.52E-16 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 Gene3D G3DSA:3.90.170.10 265 429 2.2E-69 T 01-11-2018 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 2.3E-183 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 01-11-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 SUPERFAMILY SSF52540 1 427 7.22E-173 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 Gene3D G3DSA:1.10.300.10 100 199 1.1E-104 T 01-11-2018 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 210.702 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 SMART SM00788 3 422 2.4E-289 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 424 3.4E-196 T 01-11-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 01-11-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DOE78_24600 8a1882557a6ad81e372263f1ce1114ca 430 Gene3D G3DSA:3.40.440.10 5 252 1.1E-104 T 01-11-2018 DOE78_20265 f58ab4ea46d2b843959d32512cbdf6d5 566 SMART SM00460 469 529 7.8E-14 T 01-11-2018 IPR002931 Transglutaminase-like DOE78_20265 f58ab4ea46d2b843959d32512cbdf6d5 566 Gene3D G3DSA:3.10.620.30 387 555 4.1E-38 T 01-11-2018 DOE78_20265 f58ab4ea46d2b843959d32512cbdf6d5 566 Pfam PF01841 Transglutaminase-like superfamily 421 527 6.7E-22 T 01-11-2018 IPR002931 Transglutaminase-like DOE78_20265 f58ab4ea46d2b843959d32512cbdf6d5 566 SUPERFAMILY SSF54001 404 537 9.95E-29 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily DOE78_24475 f73498a62bbef943f83abf27aeaeb126 391 Pfam PF06406 StbA protein 177 342 7.0E-8 T 01-11-2018 IPR009440 Plasmid segregation protein ParM/StbA DOE78_24475 f73498a62bbef943f83abf27aeaeb126 391 SUPERFAMILY SSF53067 208 355 2.05E-16 T 01-11-2018 DOE78_24475 f73498a62bbef943f83abf27aeaeb126 391 Gene3D G3DSA:3.30.420.40 206 342 1.0E-28 T 01-11-2018 DOE78_24475 f73498a62bbef943f83abf27aeaeb126 391 SUPERFAMILY SSF53067 6 198 1.36E-8 T 01-11-2018 DOE78_24475 f73498a62bbef943f83abf27aeaeb126 391 Gene3D G3DSA:3.30.420.40 8 205 1.0E-28 T 01-11-2018 DOE78_14730 6ced19884f35a8340b3be70303357d01 172 TIGRFAM TIGR00277 HDIG: HDIG domain 22 90 1.2E-7 T 01-11-2018 IPR006675 HDIG domain DOE78_14730 6ced19884f35a8340b3be70303357d01 172 Pfam PF01966 HD domain 24 137 8.0E-14 T 01-11-2018 IPR006674 HD domain DOE78_14730 6ced19884f35a8340b3be70303357d01 172 SUPERFAMILY SSF109604 16 137 5.56E-21 T 01-11-2018 DOE78_14730 6ced19884f35a8340b3be70303357d01 172 SMART SM00471 19 148 4.6E-8 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_14730 6ced19884f35a8340b3be70303357d01 172 Gene3D G3DSA:1.10.3210.10 4 169 6.7E-17 T 01-11-2018 DOE78_10685 cae877194bcb5027089abfa2d2c4df5c 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 2.1E-23 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_10685 cae877194bcb5027089abfa2d2c4df5c 219 SUPERFAMILY SSF161098 13 217 1.57E-44 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_10685 cae877194bcb5027089abfa2d2c4df5c 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 4.4E-30 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DOE78_10685 cae877194bcb5027089abfa2d2c4df5c 219 Gene3D G3DSA:1.10.3720.10 1 219 4.2E-58 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_01205 444eba1e5e30d8972dd0e7a298775a45 404 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 387 1.2E-92 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_01205 444eba1e5e30d8972dd0e7a298775a45 404 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 223 386 1.7E-37 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_01205 444eba1e5e30d8972dd0e7a298775a45 404 Gene3D G3DSA:3.30.300.210 238 390 7.0E-36 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_06605 90a31f24c89f6f2025240274d0a1f9ec 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 5.2E-38 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_06605 90a31f24c89f6f2025240274d0a1f9ec 309 Gene3D G3DSA:1.10.3720.10 84 298 7.3E-20 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06605 90a31f24c89f6f2025240274d0a1f9ec 309 SUPERFAMILY SSF161098 90 286 5.89E-17 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_22215 1c7421f174a4cfc4b95e9ac7eda27480 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 256 9.2E-79 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DOE78_22215 1c7421f174a4cfc4b95e9ac7eda27480 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DOE78_22215 1c7421f174a4cfc4b95e9ac7eda27480 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 263 1.0E-89 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DOE78_22215 1c7421f174a4cfc4b95e9ac7eda27480 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 18.21 T 01-11-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DOE78_11005 16df34116713e096741574b0374663c3 164 Gene3D G3DSA:1.10.10.10 85 159 4.4E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_11005 16df34116713e096741574b0374663c3 164 Pfam PF04542 Sigma-70 region 2 13 75 2.1E-15 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_11005 16df34116713e096741574b0374663c3 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 156 2.7E-25 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_11005 16df34116713e096741574b0374663c3 164 SUPERFAMILY SSF88946 7 85 2.16E-20 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_11005 16df34116713e096741574b0374663c3 164 Pfam PF08281 Sigma-70, region 4 102 153 3.0E-12 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_11005 16df34116713e096741574b0374663c3 164 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 01-11-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_11005 16df34116713e096741574b0374663c3 164 SUPERFAMILY SSF88659 92 156 3.36E-12 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_11005 16df34116713e096741574b0374663c3 164 Gene3D G3DSA:1.10.1740.10 3 71 1.2E-20 T 01-11-2018 DOE78_06255 b0f6bbffacc267a16c03207a5c072a89 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 417 5.3E-58 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_06255 b0f6bbffacc267a16c03207a5c072a89 451 Pfam PF01554 MatE 18 177 3.2E-32 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_06255 b0f6bbffacc267a16c03207a5c072a89 451 Pfam PF01554 MatE 243 404 7.2E-33 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_06255 b0f6bbffacc267a16c03207a5c072a89 451 PIRSF PIRSF006603 2 451 1.3E-84 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_10665 9169347956140561b40faa5bf88d425e 230 Gene3D G3DSA:3.40.50.300 6 197 2.9E-43 T 01-11-2018 DOE78_10665 9169347956140561b40faa5bf88d425e 230 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 160 1.1E-11 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_10665 9169347956140561b40faa5bf88d425e 230 SUPERFAMILY SSF52540 5 178 2.32E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_10665 9169347956140561b40faa5bf88d425e 230 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 5.6E-6 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_10665 9169347956140561b40faa5bf88d425e 230 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 55 70 5.6E-6 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_10665 9169347956140561b40faa5bf88d425e 230 Pfam PF02421 Ferrous iron transport protein B 6 160 3.6E-58 T 01-11-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 SUPERFAMILY SSF50129 2 93 3.06E-34 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 01-11-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 SMART SM00883 1 93 1.0E-54 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 26.696 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 Gene3D G3DSA:2.30.33.40 1 93 3.7E-38 T 01-11-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 PRINTS PR00297 10kDa chaperonin signature 2 17 9.9E-32 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 PRINTS PR00297 10kDa chaperonin signature 24 45 9.9E-32 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 PRINTS PR00297 10kDa chaperonin signature 80 93 9.9E-32 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 PRINTS PR00297 10kDa chaperonin signature 59 71 9.9E-32 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DOE78_01525 24a22e4f8058fdebedec9fe106501502 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 92 2.7E-36 T 01-11-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DOE78_04840 aa1c61e0f53093aa70db5e8683305ac5 271 SUPERFAMILY SSF161098 71 255 1.57E-33 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04840 aa1c61e0f53093aa70db5e8683305ac5 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 263 7.5E-26 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_04840 aa1c61e0f53093aa70db5e8683305ac5 271 Gene3D G3DSA:1.10.3720.10 69 262 2.0E-26 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 SUPERFAMILY SSF52172 109 242 3.56E-30 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 SUPERFAMILY SSF55073 242 396 1.1E-45 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 Pfam PF00072 Response regulator receiver domain 412 530 8.2E-18 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 Pfam PF00072 Response regulator receiver domain 112 223 8.1E-21 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 SMART SM00448 410 530 2.3E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 SMART SM00448 110 223 2.7E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 SMART SM00267 225 398 1.1E-51 T 01-11-2018 IPR000160 GGDEF domain DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 SUPERFAMILY SSF47226 16 86 6.48E-6 T 01-11-2018 IPR036641 HPT domain superfamily GO:0000160 DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 393 3.0E-44 T 01-11-2018 IPR000160 GGDEF domain DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 397 3.0E-45 T 01-11-2018 IPR000160 GGDEF domain DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 Gene3D G3DSA:3.40.50.2300 108 240 1.5E-26 T 01-11-2018 DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 SUPERFAMILY SSF52172 408 537 7.4E-26 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 Gene3D G3DSA:3.30.70.270 241 406 1.0E-49 T 01-11-2018 DOE78_05485 2b9ec6e86401ed0884c0a0952f779ca0 539 Gene3D G3DSA:3.40.50.2300 407 539 9.9E-25 T 01-11-2018 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 SUPERFAMILY SSF54719 94 204 9.04E-46 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 166 173 - T 01-11-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 1.8E-30 T 01-11-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 Gene3D G3DSA:2.40.500.20 94 205 2.8E-49 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 Gene3D G3DSA:1.10.287.990 21 91 2.0E-31 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 SUPERFAMILY SSF46609 3 92 1.11E-36 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 PIRSF PIRSF000349 1 205 8.9E-85 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 198 5.8E-42 T 01-11-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 PRINTS PR01703 Manganese superoxide dismutase signature 164 176 9.7E-26 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 PRINTS PR01703 Manganese superoxide dismutase signature 127 135 9.7E-26 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 9.7E-26 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 9.7E-26 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_10725 9deb09c79fa786e6855a6c4434f5c263 205 PRINTS PR01703 Manganese superoxide dismutase signature 74 87 9.7E-26 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16465 6f9f5b9ca8c282e6ba92bfd0fc9bfc9b 214 PIRSF PIRSF038973 1 213 1.5E-76 T 01-11-2018 IPR014196 Stage II sporulation protein M DOE78_16465 6f9f5b9ca8c282e6ba92bfd0fc9bfc9b 214 Pfam PF01944 Stage II sporulation protein M 25 202 4.4E-27 T 01-11-2018 IPR002798 Stage II sporulation protein M-like DOE78_16465 6f9f5b9ca8c282e6ba92bfd0fc9bfc9b 214 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 9 206 2.2E-75 T 01-11-2018 IPR014196 Stage II sporulation protein M DOE78_23805 786b3a629531387e805e39459c524410 69 SUPERFAMILY SSF143800 1 65 5.49E-26 T 01-11-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_23805 786b3a629531387e805e39459c524410 69 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.9E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_23805 786b3a629531387e805e39459c524410 69 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.9E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_23805 786b3a629531387e805e39459c524410 69 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.9E-22 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_23805 786b3a629531387e805e39459c524410 69 Gene3D G3DSA:2.30.170.50 1 69 4.4E-32 T 01-11-2018 DOE78_23805 786b3a629531387e805e39459c524410 69 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 5.8E-31 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_23805 786b3a629531387e805e39459c524410 69 Pfam PF01197 Ribosomal protein L31 1 64 1.5E-31 T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_23805 786b3a629531387e805e39459c524410 69 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 01-11-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_23805 786b3a629531387e805e39459c524410 69 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 28.597 T 01-11-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_03110 16050534e3c0926b5385468f98e3f528 404 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 393 2.5E-130 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_03110 16050534e3c0926b5385468f98e3f528 404 Gene3D G3DSA:3.90.1150.10 262 402 2.6E-46 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_03110 16050534e3c0926b5385468f98e3f528 404 SUPERFAMILY SSF53383 24 394 2.02E-108 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_03110 16050534e3c0926b5385468f98e3f528 404 PIRSF PIRSF001434 2 397 6.4E-139 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_03110 16050534e3c0926b5385468f98e3f528 404 Gene3D G3DSA:3.40.640.10 10 261 1.0E-80 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 Gene3D G3DSA:3.40.1830.10 1 178 4.8E-70 T 01-11-2018 IPR035097 Peptidase M29, N-terminal DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 323 344 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 79 98 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 300 320 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 244 263 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 388 407 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 362 384 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 155 177 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 6.3E-77 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 Pfam PF02073 Thermophilic metalloprotease (M29) 4 407 1.2E-181 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_03365 2ef3f42b68af16d0a947998706bfd562 409 SUPERFAMILY SSF144052 3 408 3.53E-154 T 01-11-2018 DOE78_19765 6fcad953f5f18f0031982396e3371cd1 305 Pfam PF00892 EamA-like transporter family 9 139 6.6E-16 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_19765 6fcad953f5f18f0031982396e3371cd1 305 Pfam PF00892 EamA-like transporter family 151 285 1.2E-19 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_19765 6fcad953f5f18f0031982396e3371cd1 305 SUPERFAMILY SSF103481 189 289 4.84E-13 T 01-11-2018 DOE78_19765 6fcad953f5f18f0031982396e3371cd1 305 SUPERFAMILY SSF103481 39 142 1.24E-14 T 01-11-2018 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 210 3.4E-84 T 01-11-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 SUPERFAMILY SSF52141 5 219 1.61E-90 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 SMART SM00987 48 207 4.3E-39 T 01-11-2018 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 56 65 - T 01-11-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 Pfam PF03167 Uracil DNA glycosylase superfamily 52 207 1.2E-27 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 SMART SM00986 48 207 4.3E-39 T 01-11-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 Gene3D G3DSA:3.40.470.10 2 220 5.0E-98 T 01-11-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_24005 2dc4b82a530cb309779fb5326aa146e6 220 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 218 40.869 T 01-11-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DOE78_14690 c3eb3ca621adc338785040f247257f50 434 TIGRFAM TIGR00886 2A0108: nitrite transporter 27 380 2.3E-97 T 01-11-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 DOE78_14690 c3eb3ca621adc338785040f247257f50 434 SUPERFAMILY SSF103473 6 421 7.19E-48 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_14690 c3eb3ca621adc338785040f247257f50 434 Gene3D G3DSA:1.20.1250.20 1 227 3.1E-79 T 01-11-2018 DOE78_14690 c3eb3ca621adc338785040f247257f50 434 Pfam PF07690 Major Facilitator Superfamily 54 356 1.9E-14 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_14690 c3eb3ca621adc338785040f247257f50 434 Gene3D G3DSA:1.20.1250.20 228 433 2.4E-62 T 01-11-2018 DOE78_07625 d876c7a0d7473d8887a6d17fd00b5c43 252 SUPERFAMILY SSF52096 5 252 2.2E-48 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_07625 d876c7a0d7473d8887a6d17fd00b5c43 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 252 1.4E-30 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DOE78_07625 d876c7a0d7473d8887a6d17fd00b5c43 252 Gene3D G3DSA:3.90.226.10 1 252 2.4E-50 T 01-11-2018 DOE78_02075 3bbe36b51a89f30e4e109cb1f3e32b34 50 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 28 46 1.3E-8 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_02075 3bbe36b51a89f30e4e109cb1f3e32b34 50 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 28 46 5.4E-11 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_16045 744a697a9368ded713b008ac498f442c 428 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 01-11-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DOE78_16045 744a697a9368ded713b008ac498f442c 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 423 4.9E-124 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DOE78_16045 744a697a9368ded713b008ac498f442c 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 427 8.0E-131 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DOE78_16045 744a697a9368ded713b008ac498f442c 428 Gene3D G3DSA:3.65.10.10 22 230 5.6E-152 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DOE78_16045 744a697a9368ded713b008ac498f442c 428 Gene3D G3DSA:3.65.10.10 14 423 5.6E-152 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DOE78_16045 744a697a9368ded713b008ac498f442c 428 PIRSF PIRSF000505 1 428 4.3E-119 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DOE78_16045 744a697a9368ded713b008ac498f442c 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 428 33.974 T 01-11-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DOE78_16045 744a697a9368ded713b008ac498f442c 428 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 01-11-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DOE78_16045 744a697a9368ded713b008ac498f442c 428 SUPERFAMILY SSF55205 8 426 2.88E-134 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DOE78_03975 64c47aab8bc3899bb8735d9fdb2abc68 815 Gene3D G3DSA:2.60.120.260 28 186 4.7E-21 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_03975 64c47aab8bc3899bb8735d9fdb2abc68 815 Gene3D G3DSA:2.60.120.260 661 811 1.7E-32 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_03975 64c47aab8bc3899bb8735d9fdb2abc68 815 Gene3D G3DSA:3.20.20.80 193 586 8.0E-168 T 01-11-2018 DOE78_03975 64c47aab8bc3899bb8735d9fdb2abc68 815 SUPERFAMILY SSF51445 210 580 4.23E-109 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_03975 64c47aab8bc3899bb8735d9fdb2abc68 815 Pfam PF07532 Bacterial Ig-like domain (group 4) 593 652 3.5E-11 T 01-11-2018 IPR011081 Bacterial Ig-related DOE78_03975 64c47aab8bc3899bb8735d9fdb2abc68 815 Pfam PF07745 Glycosyl hydrolase family 53 213 577 1.5E-137 T 01-11-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 Gene3D G3DSA:1.20.1480.50 177 268 2.6E-15 T 01-11-2018 DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 Pfam PF00672 HAMP domain 215 262 1.2E-10 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 SUPERFAMILY SSF58104 234 570 1.7E-72 T 01-11-2018 DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 Gene3D G3DSA:1.10.287.950 269 570 1.1E-66 T 01-11-2018 DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 SUPERFAMILY SSF103190 75 179 2.94E-5 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 SMART SM00283 295 570 1.5E-71 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 SMART SM00304 214 266 5.7E-12 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_22545 7b74b8ab36e3715faff0c34c0d6815c7 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 523 7.9E-47 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_22775 468843a788c8fc394a5b40543ca5d87d 131 Pfam PF05025 RbsD / FucU transport protein family 1 130 7.3E-50 T 01-11-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DOE78_22775 468843a788c8fc394a5b40543ca5d87d 131 Gene3D G3DSA:3.40.1650.10 8 127 7.3E-40 T 01-11-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DOE78_22775 468843a788c8fc394a5b40543ca5d87d 131 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 131 32.581 T 01-11-2018 IPR023064 D-ribose pyranase GO:0016872 DOE78_22775 468843a788c8fc394a5b40543ca5d87d 131 SUPERFAMILY SSF102546 1 131 2.62E-45 T 01-11-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 360 43.357 T 01-11-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 SUPERFAMILY SSF56059 107 305 9.55E-66 T 01-11-2018 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 SUPERFAMILY SSF51246 309 373 9.42E-16 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 SUPERFAMILY SSF52440 7 98 5.04E-27 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 363 5.5E-131 T 01-11-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 Gene3D G3DSA:3.40.50.20 2 116 1.6E-47 T 01-11-2018 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 Gene3D G3DSA:3.30.470.20 186 375 1.4E-81 T 01-11-2018 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 Gene3D G3DSA:3.30.1490.20 117 185 3.5E-25 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_01830 0b3c8205a28c3aa538fdc8c17726ce05 382 Pfam PF02222 ATP-grasp domain 116 285 1.2E-58 T 01-11-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DOE78_06935 2cb5505e0dae066c1c4b19c88688c133 327 SMART SM00052 80 321 5.1E-35 T 01-11-2018 IPR001633 EAL domain DOE78_06935 2cb5505e0dae066c1c4b19c88688c133 327 Pfam PF00563 EAL domain 86 316 7.0E-55 T 01-11-2018 IPR001633 EAL domain DOE78_06935 2cb5505e0dae066c1c4b19c88688c133 327 SUPERFAMILY SSF141868 85 324 1.96E-63 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_06935 2cb5505e0dae066c1c4b19c88688c133 327 Gene3D G3DSA:3.20.20.450 83 326 1.6E-62 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_18390 bd6830f0aedf17a0b1261839e635e580 126 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 7.8E-41 T 01-11-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DOE78_18390 bd6830f0aedf17a0b1261839e635e580 126 SUPERFAMILY SSF56276 2 113 5.89E-40 T 01-11-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 DOE78_18390 bd6830f0aedf17a0b1261839e635e580 126 Gene3D G3DSA:3.30.360.110 1 62 4.1E-26 T 01-11-2018 DOE78_18390 bd6830f0aedf17a0b1261839e635e580 126 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 1.0E-36 T 01-11-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DOE78_18390 bd6830f0aedf17a0b1261839e635e580 126 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 31.719 T 01-11-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DOE78_18390 bd6830f0aedf17a0b1261839e635e580 126 Gene3D G3DSA:3.30.160.750 63 125 1.6E-18 T 01-11-2018 DOE78_09370 6c87ab80433bcf432929e659a12ebf70 564 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 29 482 1.8E-75 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09370 6c87ab80433bcf432929e659a12ebf70 564 Gene3D G3DSA:1.20.210.10 17 564 3.0E-112 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09370 6c87ab80433bcf432929e659a12ebf70 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 434 455 9.4E-11 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09370 6c87ab80433bcf432929e659a12ebf70 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 66 89 9.4E-11 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09370 6c87ab80433bcf432929e659a12ebf70 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 146 9.4E-11 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09370 6c87ab80433bcf432929e659a12ebf70 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 9.4E-11 T 01-11-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09370 6c87ab80433bcf432929e659a12ebf70 564 SUPERFAMILY SSF81442 27 558 1.83E-93 T 01-11-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_04130 dc7534a294d9787c02f04b9db8cb73fc 301 Gene3D G3DSA:1.10.340.30 124 247 1.4E-40 T 01-11-2018 DOE78_04130 dc7534a294d9787c02f04b9db8cb73fc 301 Gene3D G3DSA:1.10.1670.40 104 298 1.4E-40 T 01-11-2018 DOE78_04130 dc7534a294d9787c02f04b9db8cb73fc 301 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 72 131 1.1E-7 T 01-11-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 DOE78_04130 dc7534a294d9787c02f04b9db8cb73fc 301 SMART SM00478 136 300 2.0E-25 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_04130 dc7534a294d9787c02f04b9db8cb73fc 301 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 133 281 8.3E-15 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_04130 dc7534a294d9787c02f04b9db8cb73fc 301 SUPERFAMILY SSF48150 114 299 1.38E-41 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DOE78_05135 c78e645848c81f0b173e1eeda2276e17 50 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 16 46 2.4E-20 T 01-11-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 DOE78_05135 c78e645848c81f0b173e1eeda2276e17 50 Pfam PF08176 Small acid-soluble spore protein K family 1 47 1.1E-25 T 01-11-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 DOE78_05135 c78e645848c81f0b173e1eeda2276e17 50 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 1 49 17.475 T 01-11-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 DOE78_11170 22d9a9e05fc36f00249cea7d88db0f72 136 Gene3D G3DSA:1.10.10.10 28 136 1.7E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_11170 22d9a9e05fc36f00249cea7d88db0f72 136 Pfam PF03551 Transcriptional regulator PadR-like family 52 116 9.8E-9 T 01-11-2018 IPR005149 Transcription regulator PadR, N-terminal DOE78_11170 22d9a9e05fc36f00249cea7d88db0f72 136 SUPERFAMILY SSF46785 46 134 3.55E-11 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 01-11-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 287 4.2E-73 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 6.0E-27 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 6.0E-27 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 6.0E-27 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 6.0E-27 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 SMART SM01130 2 291 2.5E-110 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 Gene3D G3DSA:3.20.20.70 1 295 1.3E-99 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 SUPERFAMILY SSF51569 3 287 2.2E-92 T 01-11-2018 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 Pfam PF00701 Dihydrodipicolinate synthetase family 3 287 1.5E-86 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 289 41.576 T 01-11-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_02090 5e7a0621d11f9ce7e357a1ad106a3a00 299 PIRSF PIRSF001365 1 298 1.1E-87 T 01-11-2018 IPR002220 DapA-like GO:0016829 DOE78_19590 326be6316b015638c67a1b80db4fe98b 581 Pfam PF01740 STAS domain 437 538 1.3E-12 T 01-11-2018 IPR002645 STAS domain DOE78_19590 326be6316b015638c67a1b80db4fe98b 581 Pfam PF00916 Sulfate permease family 17 379 1.0E-88 T 01-11-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DOE78_19590 326be6316b015638c67a1b80db4fe98b 581 SUPERFAMILY SSF52091 434 542 1.61E-15 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_19590 326be6316b015638c67a1b80db4fe98b 581 Gene3D G3DSA:3.30.750.24 424 550 1.0E-22 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_12165 a205c82542ba611ac06d32495beec2ac 337 Pfam PF01661 Macro domain 19 132 1.0E-38 T 01-11-2018 IPR002589 Macro domain DOE78_12165 a205c82542ba611ac06d32495beec2ac 337 Gene3D G3DSA:3.40.220.10 2 170 5.4E-62 T 01-11-2018 DOE78_12165 a205c82542ba611ac06d32495beec2ac 337 SUPERFAMILY SSF52949 3 170 4.54E-57 T 01-11-2018 DOE78_12165 a205c82542ba611ac06d32495beec2ac 337 SMART SM00506 2 132 8.8E-48 T 01-11-2018 IPR002589 Macro domain DOE78_10355 3c8a25163620e9b1fd7dccc924276587 221 Pfam PF00069 Protein kinase domain 34 156 1.4E-6 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DOE78_10355 3c8a25163620e9b1fd7dccc924276587 221 SUPERFAMILY SSF56112 34 167 1.09E-15 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_10355 3c8a25163620e9b1fd7dccc924276587 221 Gene3D G3DSA:1.10.510.10 12 159 1.9E-9 T 01-11-2018 DOE78_13255 79972180f56c1d3e56087e3bd296f869 549 Gene3D G3DSA:1.10.10.2840 397 526 5.2E-13 T 01-11-2018 DOE78_13255 79972180f56c1d3e56087e3bd296f869 549 Pfam PF07905 Purine catabolism regulatory protein-like family 9 127 4.5E-34 T 01-11-2018 IPR012914 Purine catabolism PurC-like domain DOE78_13255 79972180f56c1d3e56087e3bd296f869 549 Pfam PF13556 PucR C-terminal helix-turn-helix domain 466 521 2.4E-17 T 01-11-2018 IPR025736 PucR C-terminal helix-turn-helix domain DOE78_00440 196bd451d01edafc5236bd1656ef7a89 286 ProSitePatterns PS00770 Aminotransferases class-IV signature. 178 207 - T 01-11-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DOE78_00440 196bd451d01edafc5236bd1656ef7a89 286 Pfam PF01063 Amino-transferase class IV 29 252 9.2E-52 T 01-11-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DOE78_00440 196bd451d01edafc5236bd1656ef7a89 286 Gene3D G3DSA:3.30.470.10 1 123 1.7E-37 T 01-11-2018 DOE78_00440 196bd451d01edafc5236bd1656ef7a89 286 Gene3D G3DSA:3.20.10.10 124 274 3.6E-41 T 01-11-2018 DOE78_00440 196bd451d01edafc5236bd1656ef7a89 286 SUPERFAMILY SSF56752 1 272 1.06E-69 T 01-11-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DOE78_20775 71c29d125cce937a60d2cea8abbf9ebb 69 SMART SM00530 7 62 9.2E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_20775 71c29d125cce937a60d2cea8abbf9ebb 69 SUPERFAMILY SSF47413 1 65 2.63E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_20775 71c29d125cce937a60d2cea8abbf9ebb 69 Pfam PF01381 Helix-turn-helix 8 62 6.5E-13 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_20775 71c29d125cce937a60d2cea8abbf9ebb 69 Gene3D G3DSA:1.10.260.40 1 65 9.8E-19 T 01-11-2018 DOE78_05780 be3af474f80f8d7a8a0fc755dba58eb2 300 SUPERFAMILY SSF46689 225 271 3.29E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_05780 be3af474f80f8d7a8a0fc755dba58eb2 300 Pfam PF13556 PucR C-terminal helix-turn-helix domain 237 293 1.1E-18 T 01-11-2018 IPR025736 PucR C-terminal helix-turn-helix domain DOE78_05780 be3af474f80f8d7a8a0fc755dba58eb2 300 Gene3D G3DSA:1.10.10.2840 173 300 2.3E-17 T 01-11-2018 DOE78_23290 0d45b1f0fe088ed8c802ed266bbb9643 297 Gene3D G3DSA:3.90.550.10 1 291 1.6E-95 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_23290 0d45b1f0fe088ed8c802ed266bbb9643 297 SUPERFAMILY SSF53448 4 276 1.3E-69 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_23290 0d45b1f0fe088ed8c802ed266bbb9643 297 Pfam PF00483 Nucleotidyl transferase 6 258 1.7E-34 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_23290 0d45b1f0fe088ed8c802ed266bbb9643 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 1.6E-120 T 01-11-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DOE78_17575 6f8191776368060a6719a6cd165bb481 195 SUPERFAMILY SSF52374 1 187 2.35E-56 T 01-11-2018 DOE78_17575 6f8191776368060a6719a6cd165bb481 195 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 187 31.509 T 01-11-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DOE78_17575 6f8191776368060a6719a6cd165bb481 195 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 8.8E-11 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_17575 6f8191776368060a6719a6cd165bb481 195 Gene3D G3DSA:3.40.50.620 1 187 3.1E-66 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_17575 6f8191776368060a6719a6cd165bb481 195 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 186 7.9E-57 T 01-11-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DOE78_17575 6f8191776368060a6719a6cd165bb481 195 Pfam PF01467 Cytidylyltransferase-like 6 161 8.7E-31 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_11805 1abf477f45aeb5867e742a927441273c 159 SUPERFAMILY SSF47741 87 156 1.57E-30 T 01-11-2018 IPR036884 [2Fe-2S]-binding domain superfamily DOE78_11805 1abf477f45aeb5867e742a927441273c 159 Gene3D G3DSA:3.10.20.30 1 78 1.2E-29 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_11805 1abf477f45aeb5867e742a927441273c 159 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DOE78_11805 1abf477f45aeb5867e742a927441273c 159 Gene3D G3DSA:1.10.150.120 79 159 1.3E-31 T 01-11-2018 DOE78_11805 1abf477f45aeb5867e742a927441273c 159 Pfam PF01799 [2Fe-2S] binding domain 76 148 1.4E-28 T 01-11-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DOE78_11805 1abf477f45aeb5867e742a927441273c 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 66 1.1E-8 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DOE78_11805 1abf477f45aeb5867e742a927441273c 159 SUPERFAMILY SSF54292 4 81 1.28E-25 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.8E-24 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.8E-24 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.8E-24 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 01-11-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.2E-30 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 01-11-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 Gene3D G3DSA:3.30.1340.10 1 88 2.5E-35 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.8E-32 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_05990 89e5039b85aee25c3ccd5a42ed24ca14 88 SUPERFAMILY SSF55594 1 83 1.03E-27 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_13740 c9669c4ddf411093883b97b152c1c588 156 Gene3D G3DSA:1.20.120.450 2 145 2.7E-43 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_13740 c9669c4ddf411093883b97b152c1c588 156 Pfam PF12867 DinB superfamily 15 138 1.0E-11 T 01-11-2018 IPR024775 DinB-like domain DOE78_13740 c9669c4ddf411093883b97b152c1c588 156 SUPERFAMILY SSF109854 4 142 1.53E-30 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_21125 411ea5254dbd9a42d20506d5ad9dbf4a 144 Pfam PF01592 NifU-like N terminal domain 10 128 2.4E-37 T 01-11-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DOE78_21125 411ea5254dbd9a42d20506d5ad9dbf4a 144 Gene3D G3DSA:3.90.1010.10 2 144 3.6E-62 T 01-11-2018 DOE78_21125 411ea5254dbd9a42d20506d5ad9dbf4a 144 SUPERFAMILY SSF82649 3 142 4.19E-53 T 01-11-2018 DOE78_21125 411ea5254dbd9a42d20506d5ad9dbf4a 144 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 140 1.9E-59 T 01-11-2018 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 99 117 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 157 170 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 240 252 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 118 134 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 195 212 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 141 156 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 175 192 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 PRINTS PR00737 Glycosyl hydrolase family 16 signature 215 237 1.0E-71 T 01-11-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 Gene3D G3DSA:2.60.120.200 121 276 2.1E-50 T 01-11-2018 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 Gene3D G3DSA:2.60.120.200 26 120 1.1E-16 T 01-11-2018 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 144 154 - T 01-11-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 SUPERFAMILY SSF49899 39 253 2.9E-60 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_11415 06409503dbf3ba38c9f9169d24d30250 276 Pfam PF00722 Glycosyl hydrolases family 16 62 235 5.9E-45 T 01-11-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 DOE78_18040 71a2e723773014784865b75f5c38c453 325 Gene3D G3DSA:3.20.20.70 1 323 2.8E-151 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_18040 71a2e723773014784865b75f5c38c453 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 321 2.1E-152 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 PIRSF PIRSF001415 1 325 5.5E-157 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 1.3E-59 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 1.3E-59 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 1.3E-59 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 1.3E-59 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 1.3E-59 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 1.3E-59 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 SMART SM01004 3 322 6.3E-242 T 01-11-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_18040 71a2e723773014784865b75f5c38c453 325 SUPERFAMILY SSF51569 4 324 4.83E-144 T 01-11-2018 DOE78_18040 71a2e723773014784865b75f5c38c453 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 01-11-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 1.1E-17 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 102 197 6.0E-8 T 01-11-2018 IPR039538 BetI-type transcriptional repressor, C-terminal DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 SUPERFAMILY SSF46689 5 82 3.54E-20 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 Gene3D G3DSA:1.10.10.60 1 53 1.2E-23 T 01-11-2018 DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 8.2E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 8.2E-10 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 SUPERFAMILY SSF48498 88 197 4.97E-15 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_13140 9e29e0a24b207758b4d2ea4a6efd35ea 202 Gene3D G3DSA:1.10.357.10 54 202 4.4E-30 T 01-11-2018 DOE78_03305 c8209a4e5c430aebdb901148a62fd4d6 228 SMART SM00382 32 222 2.4E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03305 c8209a4e5c430aebdb901148a62fd4d6 228 Gene3D G3DSA:3.40.50.300 2 228 6.9E-71 T 01-11-2018 DOE78_03305 c8209a4e5c430aebdb901148a62fd4d6 228 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03305 c8209a4e5c430aebdb901148a62fd4d6 228 Pfam PF00005 ABC transporter 23 174 1.5E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03305 c8209a4e5c430aebdb901148a62fd4d6 228 SUPERFAMILY SSF52540 4 226 3.77E-65 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 SUPERFAMILY SSF51735 2 155 3.22E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 Gene3D G3DSA:3.40.50.720 7 315 8.7E-101 T 01-11-2018 DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 308 324 7.3E-5 T 01-11-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 113 127 7.3E-5 T 01-11-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 2 15 7.3E-5 T 01-11-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 SUPERFAMILY SSF55347 131 285 5.23E-33 T 01-11-2018 DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 Gene3D G3DSA:3.30.360.10 128 336 8.7E-101 T 01-11-2018 DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 236 3.2E-5 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_23440 7204c10313d7489fe48ec5be97e75e2d 343 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 7.1E-33 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_16175 fa0170996e3eaeef68e45cc50762d80e 225 Hamap MF_00238 Cytidylate kinase [cmk]. 4 222 34.433 T 01-11-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DOE78_16175 fa0170996e3eaeef68e45cc50762d80e 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 216 1.7E-87 T 01-11-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DOE78_16175 fa0170996e3eaeef68e45cc50762d80e 225 SUPERFAMILY SSF52540 1 219 3.19E-49 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_16175 fa0170996e3eaeef68e45cc50762d80e 225 Pfam PF02224 Cytidylate kinase 6 219 4.3E-82 T 01-11-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DOE78_16175 fa0170996e3eaeef68e45cc50762d80e 225 Gene3D G3DSA:3.40.50.300 1 224 2.0E-88 T 01-11-2018 DOE78_10400 7729735c5a0bd78fa836926a4951cd4c 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 114 2.3E-10 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_10400 7729735c5a0bd78fa836926a4951cd4c 117 SUPERFAMILY SSF54593 8 115 2.42E-19 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10400 7729735c5a0bd78fa836926a4951cd4c 117 Gene3D G3DSA:3.10.180.10 7 116 4.6E-19 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_03480 b54fd24ba88ef592f326d5fd142a321f 137 SUPERFAMILY SSF50475 4 129 8.79E-23 T 01-11-2018 DOE78_03480 b54fd24ba88ef592f326d5fd142a321f 137 Gene3D G3DSA:2.30.110.10 1 135 1.5E-30 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 DOE78_03480 b54fd24ba88ef592f326d5fd142a321f 137 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 5 129 7.8E-11 T 01-11-2018 IPR038725 General stress protein, FMN-binding split barrel domain DOE78_10100 23144d243ec953b00a505a02973e9632 176 Pfam PF01872 RibD C-terminal domain 3 165 3.1E-23 T 01-11-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DOE78_10100 23144d243ec953b00a505a02973e9632 176 Gene3D G3DSA:3.40.430.10 1 175 3.1E-51 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DOE78_10100 23144d243ec953b00a505a02973e9632 176 SUPERFAMILY SSF53597 3 174 1.44E-37 T 01-11-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DOE78_23515 b2408198d901d3e64f92d50e43189986 232 Pfam PF01522 Polysaccharide deacetylase 38 142 2.5E-30 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DOE78_23515 b2408198d901d3e64f92d50e43189986 232 Gene3D G3DSA:3.20.20.370 21 231 5.4E-53 T 01-11-2018 DOE78_23515 b2408198d901d3e64f92d50e43189986 232 SUPERFAMILY SSF88713 31 229 1.14E-47 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_16030 b59d267abd24f04849406ffd343e6996 182 Gene3D G3DSA:1.20.1440.290 1 123 2.4E-56 T 01-11-2018 IPR038091 UPF0302, N-terminal domain superfamily DOE78_16030 b59d267abd24f04849406ffd343e6996 182 Hamap MF_00760 UPF0302 protein . 2 178 32.461 T 01-11-2018 IPR011188 Uncharacterised protein family UPF0302 DOE78_16030 b59d267abd24f04849406ffd343e6996 182 Gene3D G3DSA:4.10.810.10 124 181 8.0E-19 T 01-11-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 DOE78_16030 b59d267abd24f04849406ffd343e6996 182 SMART SM00914 139 175 8.4E-10 T 01-11-2018 IPR014957 IDEAL domain DOE78_16030 b59d267abd24f04849406ffd343e6996 182 Pfam PF08858 IDEAL domain 139 175 8.3E-12 T 01-11-2018 IPR014957 IDEAL domain DOE78_16030 b59d267abd24f04849406ffd343e6996 182 PIRSF PIRSF007165 1 182 3.1E-80 T 01-11-2018 IPR011188 Uncharacterised protein family UPF0302 DOE78_16030 b59d267abd24f04849406ffd343e6996 182 Pfam PF08864 UPF0302 domain 9 113 3.9E-49 T 01-11-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal DOE78_04720 55e798e8ab4210ba3a65999c6642ece9 312 Pfam PF02574 Homocysteine S-methyltransferase 17 308 1.9E-81 T 01-11-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DOE78_04720 55e798e8ab4210ba3a65999c6642ece9 312 PIRSF PIRSF037505 269 311 0.03 T 01-11-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DOE78_04720 55e798e8ab4210ba3a65999c6642ece9 312 PIRSF PIRSF037505 2 239 3.8E-4 T 01-11-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DOE78_04720 55e798e8ab4210ba3a65999c6642ece9 312 Gene3D G3DSA:3.20.20.330 1 310 4.5E-114 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DOE78_04720 55e798e8ab4210ba3a65999c6642ece9 312 SUPERFAMILY SSF82282 11 311 1.03E-86 T 01-11-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 SUPERFAMILY SSF51905 7 339 9.15E-67 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 329 1.3E-74 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 SUPERFAMILY SSF55424 345 467 8.25E-42 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 Gene3D G3DSA:3.50.50.60 13 334 7.1E-126 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.2E-41 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 1.2E-41 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.2E-41 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 1.2E-41 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.2E-41 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 Gene3D G3DSA:3.50.50.60 152 272 7.1E-126 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 467 2.2E-176 T 01-11-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PIRSF PIRSF000350 3 458 3.9E-102 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.8E-76 T 01-11-2018 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 3.4E-37 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DOE78_07350 b1730d7fa3022dc700c1f9d336bdfd98 469 Gene3D G3DSA:3.30.390.30 347 467 1.1E-44 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_04845 9f9ffac5575b48721bd24cf1c6a2ce59 264 Pfam PF00005 ABC transporter 37 176 1.2E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04845 9f9ffac5575b48721bd24cf1c6a2ce59 264 SMART SM00382 46 226 4.0E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_04845 9f9ffac5575b48721bd24cf1c6a2ce59 264 Gene3D G3DSA:3.40.50.300 16 257 1.7E-68 T 01-11-2018 DOE78_04845 9f9ffac5575b48721bd24cf1c6a2ce59 264 SUPERFAMILY SSF52540 18 230 4.48E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_04845 9f9ffac5575b48721bd24cf1c6a2ce59 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_23075 b7b19245c007c0fd4e51fcda0b09084c 312 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 88 231 3.8E-51 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_23075 b7b19245c007c0fd4e51fcda0b09084c 312 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 13 312 49.603 T 01-11-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU DOE78_23075 b7b19245c007c0fd4e51fcda0b09084c 312 Gene3D G3DSA:1.10.260.150 53 312 1.3E-93 T 01-11-2018 DOE78_23075 b7b19245c007c0fd4e51fcda0b09084c 312 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 89 230 1.8E-50 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_16240 15dda32c873b012d9cd640721084b6c8 210 SUPERFAMILY SSF54631 1 125 1.71E-21 T 01-11-2018 DOE78_16240 15dda32c873b012d9cd640721084b6c8 210 Pfam PF00571 CBS domain 3 54 1.6E-4 T 01-11-2018 IPR000644 CBS domain DOE78_16240 15dda32c873b012d9cd640721084b6c8 210 Gene3D G3DSA:3.10.580.10 1 139 8.3E-24 T 01-11-2018 DOE78_08695 cdc99fe915c0f4eaee0bf55351196ff6 145 Pfam PF10747 Sporulation inhibitor of replication protein SirA 2 140 1.5E-41 T 01-11-2018 IPR019683 Sporulation inhibitor of replication protein SirA DOE78_08695 cdc99fe915c0f4eaee0bf55351196ff6 145 Gene3D G3DSA:3.30.310.250 1 145 4.4E-49 T 01-11-2018 IPR038449 SirA superfamily DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 31 58 1.8E-11 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 89 1.8E-11 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 10 97 6.8E-22 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 Gene3D G3DSA:1.10.287.950 1 151 3.0E-25 T 01-11-2018 DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 SUPERFAMILY SSF58104 9 157 9.16E-26 T 01-11-2018 DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 SUPERFAMILY SSF103190 144 248 3.77E-12 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 Gene3D G3DSA:3.30.450.20 210 330 3.2E-11 T 01-11-2018 DOE78_19525 a9739185d9fd15f52e74eeb19877210b 331 Pfam PF02743 Cache domain 121 327 2.9E-23 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_09170 8b3d8e64cd68852ecacf634092de71dc 148 Gene3D G3DSA:2.30.110.10 2 148 2.2E-45 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 DOE78_09170 8b3d8e64cd68852ecacf634092de71dc 148 SUPERFAMILY SSF50475 19 111 1.05E-6 T 01-11-2018 DOE78_01145 0a13d3ca0633e374369aaaa5de1fd0c4 470 Gene3D G3DSA:3.40.50.2300 370 470 7.9E-40 T 01-11-2018 DOE78_01145 0a13d3ca0633e374369aaaa5de1fd0c4 470 Pfam PF02378 Phosphotransferase system, EIIC 24 282 6.8E-22 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_01145 0a13d3ca0633e374369aaaa5de1fd0c4 470 SUPERFAMILY SSF52794 380 469 5.06E-27 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_01145 0a13d3ca0633e374369aaaa5de1fd0c4 470 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 383 467 6.3E-13 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_01145 0a13d3ca0633e374369aaaa5de1fd0c4 470 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 14 353 5.1E-180 T 01-11-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 DOE78_13525 c26a932384679e3b941e27552764225f 228 Gene3D G3DSA:1.10.287.130 12 65 3.9E-8 T 01-11-2018 DOE78_13525 c26a932384679e3b941e27552764225f 228 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 118 223 2.6E-23 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13525 c26a932384679e3b941e27552764225f 228 Pfam PF00512 His Kinase A (phospho-acceptor) domain 12 60 6.5E-8 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13525 c26a932384679e3b941e27552764225f 228 SUPERFAMILY SSF47384 9 60 6.28E-6 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_13525 c26a932384679e3b941e27552764225f 228 Gene3D G3DSA:3.30.565.10 71 226 3.3E-42 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13525 c26a932384679e3b941e27552764225f 228 SMART SM00387 114 225 2.2E-26 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_13525 c26a932384679e3b941e27552764225f 228 SUPERFAMILY SSF55874 60 222 1.76E-37 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13525 c26a932384679e3b941e27552764225f 228 PRINTS PR00344 Bacterial sensor protein C-terminal signature 185 203 4.0E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13525 c26a932384679e3b941e27552764225f 228 PRINTS PR00344 Bacterial sensor protein C-terminal signature 209 222 4.0E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13525 c26a932384679e3b941e27552764225f 228 PRINTS PR00344 Bacterial sensor protein C-terminal signature 174 184 4.0E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_13525 c26a932384679e3b941e27552764225f 228 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 170 4.0E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 SUPERFAMILY SSF103039 47 232 3.79E-32 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 Gene3D G3DSA:3.40.1550.10 48 235 1.4E-61 T 01-11-2018 IPR028976 CheC-like superfamily DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 SUPERFAMILY SSF101801 252 328 3.53E-17 T 01-11-2018 IPR036429 SpoA-like superfamily DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 323 6.7E-20 T 01-11-2018 IPR001543 Surface presentation of antigen (SpoA) DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 8.1E-30 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 8.1E-30 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 8.1E-30 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 8.1E-30 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 4.8E-75 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 Gene3D G3DSA:2.30.330.10 238 328 7.1E-7 T 01-11-2018 IPR036429 SpoA-like superfamily DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 PIRSF PIRSF002888 2 332 2.3E-118 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DOE78_08225 1cf9fae1106afe7cb720bed54679583e 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 324 4.8E-119 T 01-11-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DOE78_10460 69908ad8f62706a9b4d4c0cab4a7767d 192 Pfam PF07486 Cell Wall Hydrolase 89 190 5.0E-24 T 01-11-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DOE78_10460 69908ad8f62706a9b4d4c0cab4a7767d 192 Gene3D G3DSA:2.40.10.420 159 191 1.4E-13 T 01-11-2018 DOE78_10460 69908ad8f62706a9b4d4c0cab4a7767d 192 Gene3D G3DSA:1.10.10.2520 73 155 3.8E-27 T 01-11-2018 DOE78_13735 88d1a65f3553044e5570c6ee4b593b98 156 Gene3D G3DSA:1.20.120.450 9 156 6.7E-24 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_13735 88d1a65f3553044e5570c6ee4b593b98 156 SUPERFAMILY SSF109854 8 156 6.23E-31 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_13735 88d1a65f3553044e5570c6ee4b593b98 156 Pfam PF12867 DinB superfamily 11 140 1.1E-13 T 01-11-2018 IPR024775 DinB-like domain DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 382 396 6.7E-26 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 449 462 6.7E-26 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 310 332 6.7E-26 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 79 98 6.7E-26 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 367 381 6.7E-26 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 Gene3D G3DSA:3.40.710.10 290 492 2.5E-52 T 01-11-2018 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 66 472 9.4E-113 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 Gene3D G3DSA:3.50.80.20 103 206 1.1E-23 T 01-11-2018 DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 SUPERFAMILY SSF56601 48 491 1.13E-90 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_14370 5c013ddcaf05e0f8b2ff425d0e54a690 492 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 38 491 1.7E-126 T 01-11-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 235 14.718 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.9E-33 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 1.9E-33 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 1.9E-33 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 1.9E-33 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 6.1E-52 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 ProSitePatterns PS01218 TatC family signature. 147 166 - T 01-11-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DOE78_12730 17dac0c2f2c915d9ab09f117c7d659f4 242 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 219 2.2E-53 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 SUPERFAMILY SSF56712 2 569 3.01E-174 T 01-11-2018 IPR023405 DNA topoisomerase, type IA, core domain DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 Gene3D G3DSA:3.40.50.140 2 153 1.4E-52 T 01-11-2018 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 Pfam PF01131 DNA topoisomerase 151 555 1.0E-130 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 Gene3D G3DSA:1.10.290.10 268 398 2.2E-134 T 01-11-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 483 497 1.9E-29 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 185 203 1.9E-29 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 384 400 1.9E-29 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.9E-29 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 302 311 1.9E-29 T 01-11-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 Gene3D G3DSA:1.10.460.10 159 564 2.2E-134 T 01-11-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 SMART SM00493 2 125 2.3E-17 T 01-11-2018 IPR006171 TOPRIM domain DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 SMART SM00436 125 215 4.0E-38 T 01-11-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 296 311 - T 01-11-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 Pfam PF01751 Toprim domain 4 132 1.1E-14 T 01-11-2018 IPR006171 TOPRIM domain DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 679 1.7E-203 T 01-11-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 SMART SM00437 259 520 8.8E-76 T 01-11-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DOE78_03375 912939b8ad704784f6a26d2f6d9dbb68 696 Gene3D G3DSA:2.70.20.10 209 467 2.2E-134 T 01-11-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DOE78_04200 a945601575521e90945542a25a2edc28 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 399 9.4E-7 T 01-11-2018 DOE78_04200 a945601575521e90945542a25a2edc28 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.4E-7 T 01-11-2018 DOE78_04200 a945601575521e90945542a25a2edc28 426 Gene3D G3DSA:3.90.660.50 84 370 6.8E-36 T 01-11-2018 DOE78_04200 a945601575521e90945542a25a2edc28 426 SUPERFAMILY SSF51905 4 422 1.94E-41 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_04200 a945601575521e90945542a25a2edc28 426 Pfam PF01593 Flavin containing amine oxidoreductase 14 253 4.7E-15 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DOE78_04200 a945601575521e90945542a25a2edc28 426 Gene3D G3DSA:3.50.50.60 8 401 6.8E-36 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_20295 4fc611810751da96e0cb6559049d523a 357 Pfam PF02625 XdhC and CoxI family 16 76 2.3E-11 T 01-11-2018 IPR003777 XdhC- CoxI DOE78_20295 4fc611810751da96e0cb6559049d523a 357 Pfam PF13478 XdhC Rossmann domain 197 332 5.4E-28 T 01-11-2018 IPR027051 XdhC Rossmann domain DOE78_20295 4fc611810751da96e0cb6559049d523a 357 Gene3D G3DSA:3.40.50.720 196 354 2.9E-50 T 01-11-2018 DOE78_16670 104c9a959d36da16a9ddef523e353c0c 266 Pfam PF12679 ABC-2 family transporter protein 2 264 6.7E-22 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 Pfam PF02817 e3 binding domain 127 162 2.3E-14 T 01-11-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 Pfam PF00364 Biotin-requiring enzyme 4 75 1.6E-25 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 Gene3D G3DSA:4.10.320.10 115 169 5.1E-22 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 206 434 9.5E-88 T 01-11-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 Gene3D G3DSA:2.40.50.100 2 81 1.4E-28 T 01-11-2018 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 SUPERFAMILY SSF47005 120 167 3.92E-13 T 01-11-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 SUPERFAMILY SSF51230 1 88 1.03E-27 T 01-11-2018 IPR011053 Single hybrid motif DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 Gene3D G3DSA:3.30.559.10 189 432 8.6E-90 T 01-11-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DOE78_07345 4571ce2a72aea0ba91dc8ae4aa758e52 436 SUPERFAMILY SSF52777 196 434 2.0E-88 T 01-11-2018 DOE78_10650 8b020fdec98b565765df25a34bf3007c 59 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.0E-5 T 01-11-2018 DOE78_10650 8b020fdec98b565765df25a34bf3007c 59 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.0E-5 T 01-11-2018 DOE78_10650 8b020fdec98b565765df25a34bf3007c 59 Pfam PF02416 mttA/Hcf106 family 5 52 2.8E-20 T 01-11-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DOE78_10650 8b020fdec98b565765df25a34bf3007c 59 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 58 17.246 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DOE78_10650 8b020fdec98b565765df25a34bf3007c 59 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 48 3.6E-19 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DOE78_01625 01a4f4a367114a2392fdbcf4f1828daa 276 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 52 6.1E-6 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE78_01625 01a4f4a367114a2392fdbcf4f1828daa 276 SUPERFAMILY SSF161098 70 261 6.28E-27 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_01625 01a4f4a367114a2392fdbcf4f1828daa 276 Gene3D G3DSA:1.10.3720.10 66 271 5.4E-25 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_01625 01a4f4a367114a2392fdbcf4f1828daa 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 269 2.2E-28 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_01625 01a4f4a367114a2392fdbcf4f1828daa 276 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 17 270 1.9E-110 T 01-11-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 DOE78_05185 a8d4c42d02aaa7dad4691271336473d3 329 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05185 a8d4c42d02aaa7dad4691271336473d3 329 Gene3D G3DSA:3.40.50.300 4 328 1.2E-101 T 01-11-2018 DOE78_05185 a8d4c42d02aaa7dad4691271336473d3 329 SMART SM00382 35 243 9.4E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05185 a8d4c42d02aaa7dad4691271336473d3 329 SUPERFAMILY SSF52540 6 256 7.01E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05185 a8d4c42d02aaa7dad4691271336473d3 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 9.8E-30 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_05185 a8d4c42d02aaa7dad4691271336473d3 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 1.2E-20 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_05185 a8d4c42d02aaa7dad4691271336473d3 329 Pfam PF00005 ABC transporter 27 185 1.2E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 Pfam PF03448 MgtE intracellular N domain 36 138 3.0E-23 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 SUPERFAMILY SSF54631 140 277 6.32E-35 T 01-11-2018 DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 Gene3D G3DSA:1.10.357.20 278 453 6.1E-60 T 01-11-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 454 1.8E-132 T 01-11-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 Pfam PF01769 Divalent cation transporter 325 446 2.5E-31 T 01-11-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 Gene3D G3DSA:3.10.580.10 137 265 3.7E-49 T 01-11-2018 DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 Pfam PF00571 CBS domain 141 197 2.3E-10 T 01-11-2018 IPR000644 CBS domain DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 Pfam PF00571 CBS domain 205 259 3.4E-9 T 01-11-2018 IPR000644 CBS domain DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 SUPERFAMILY SSF158791 14 138 3.66E-31 T 01-11-2018 DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 SMART SM00116 212 260 2.4E-5 T 01-11-2018 IPR000644 CBS domain DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 SMART SM00116 148 201 2.2E-4 T 01-11-2018 IPR000644 CBS domain DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 SUPERFAMILY SSF161093 284 453 4.32E-52 T 01-11-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 SMART SM00924 36 141 2.1E-26 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DOE78_06705 761fdd06dd0624442d0d4742940bcb8d 458 Gene3D G3DSA:1.25.60.10 4 136 4.8E-44 T 01-11-2018 IPR038076 MgtE, N-terminal domain superfamily DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 Gene3D G3DSA:1.10.1670.10 19 222 8.5E-91 T 01-11-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 Pfam PF14815 NUDIX domain 244 358 1.4E-18 T 01-11-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 SMART SM00478 48 199 1.0E-52 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 SMART SM00525 200 220 9.1E-4 T 01-11-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 175 3.1E-18 T 01-11-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 Pfam PF00633 Helix-hairpin-helix motif 109 137 4.0E-9 T 01-11-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 Gene3D G3DSA:1.10.340.30 30 141 8.5E-91 T 01-11-2018 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 SUPERFAMILY SSF48150 14 231 1.05E-75 T 01-11-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 SUPERFAMILY SSF55811 229 361 1.15E-22 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 Gene3D G3DSA:3.90.79.10 238 363 3.7E-28 T 01-11-2018 DOE78_05150 04f39d2270631a71f9af99cd80bf20f3 364 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 16 277 7.6E-110 T 01-11-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DOE78_00430 14486874d33f95e93c34d4a41687464f 466 Pfam PF00425 chorismate binding enzyme 196 449 1.1E-99 T 01-11-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DOE78_00430 14486874d33f95e93c34d4a41687464f 466 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 150 4.6E-30 T 01-11-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_00430 14486874d33f95e93c34d4a41687464f 466 PRINTS PR00095 Anthranilate synthase component I signature 297 310 1.4E-18 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_00430 14486874d33f95e93c34d4a41687464f 466 PRINTS PR00095 Anthranilate synthase component I signature 406 420 1.4E-18 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_00430 14486874d33f95e93c34d4a41687464f 466 PRINTS PR00095 Anthranilate synthase component I signature 311 324 1.4E-18 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_00430 14486874d33f95e93c34d4a41687464f 466 PRINTS PR00095 Anthranilate synthase component I signature 391 405 1.4E-18 T 01-11-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DOE78_00430 14486874d33f95e93c34d4a41687464f 466 Gene3D G3DSA:3.60.120.10 3 464 1.1E-162 T 01-11-2018 IPR005801 ADC synthase GO:0009058 DOE78_00430 14486874d33f95e93c34d4a41687464f 466 SUPERFAMILY SSF56322 9 456 4.71E-144 T 01-11-2018 IPR005801 ADC synthase GO:0009058 DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 SUPERFAMILY SSF46785 3 84 1.79E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 SUPERFAMILY SSF64288 61 240 1.05E-45 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 SMART SM00345 14 73 1.9E-23 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 6.3E-22 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 Pfam PF07702 UTRA domain 95 233 2.5E-37 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.0E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.0E-10 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 Gene3D G3DSA:1.10.10.10 2 73 6.9E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 Gene3D G3DSA:3.40.1410.10 74 241 2.0E-47 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_09255 bce2fe291ed01a50aeb71d8c85aeee60 242 SMART SM00866 94 234 2.4E-31 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 SUPERFAMILY SSF101215 2 84 1.37E-25 T 01-11-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 10 83 2.5E-28 T 01-11-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 1.0E-25 T 01-11-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 148 334 2.2E-50 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 SUPERFAMILY SSF81606 123 333 1.23E-9 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 SMART SM00331 119 334 6.9E-65 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 Gene3D G3DSA:1.10.1240.30 1 84 7.6E-30 T 01-11-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 DOE78_01360 a0442a9a2965226567f47718fa1bd955 336 Gene3D G3DSA:3.60.40.10 86 336 1.3E-54 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 01-11-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.5E-30 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 01-11-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 Gene3D G3DSA:3.30.1340.10 1 87 2.0E-35 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 SUPERFAMILY SSF55594 1 83 4.84E-28 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-25 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-25 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-25 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_07165 e2f9ebf4bb7a095a3374b8c01d942b4e 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.8E-32 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_01995 88a9c9df3311a17cee45da9fd331b44e 312 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 127 8.2E-39 T 01-11-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DOE78_01995 88a9c9df3311a17cee45da9fd331b44e 312 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 5.0E-113 T 01-11-2018 IPR005218 Diacylglycerol/lipid kinase DOE78_01995 88a9c9df3311a17cee45da9fd331b44e 312 SUPERFAMILY SSF111331 1 294 2.22E-89 T 01-11-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE78_01995 88a9c9df3311a17cee45da9fd331b44e 312 SMART SM00046 3 131 7.5E-12 T 01-11-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DOE78_01995 88a9c9df3311a17cee45da9fd331b44e 312 Gene3D G3DSA:3.40.50.10330 1 129 1.3E-50 T 01-11-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DOE78_01995 88a9c9df3311a17cee45da9fd331b44e 312 Gene3D G3DSA:2.60.200.40 130 284 4.4E-43 T 01-11-2018 DOE78_03645 9ed9a234b1a5d46020529d55446dafbf 74 SUPERFAMILY SSF75445 1 64 6.8E-9 T 01-11-2018 DOE78_03645 9ed9a234b1a5d46020529d55446dafbf 74 Gene3D G3DSA:3.30.70.260 1 60 1.5E-6 T 01-11-2018 DOE78_03645 9ed9a234b1a5d46020529d55446dafbf 74 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 1 71 3.6E-8 T 01-11-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DOE78_03810 549892b3d5662d4c00246a38f5de74ee 235 Gene3D G3DSA:3.30.2010.10 136 227 7.1E-18 T 01-11-2018 DOE78_03810 549892b3d5662d4c00246a38f5de74ee 235 Pfam PF01863 Protein of unknown function DUF45 20 226 3.0E-60 T 01-11-2018 IPR002725 Protein of unknown function DUF45 DOE78_03810 549892b3d5662d4c00246a38f5de74ee 235 SUPERFAMILY SSF55486 118 210 7.06E-5 T 01-11-2018 DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 SUPERFAMILY SSF52540 326 567 3.59E-82 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 Pfam PF00005 ABC transporter 349 498 9.3E-37 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 Gene3D G3DSA:1.20.1560.10 1 314 5.2E-85 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 SMART SM00382 358 542 2.0E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 SUPERFAMILY SSF90123 2 315 4.97E-73 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 Gene3D G3DSA:3.40.50.300 324 574 7.3E-85 T 01-11-2018 DOE78_24130 2fd2cb0e57e1c7304afc3dd928a140a4 575 Pfam PF00664 ABC transporter transmembrane region 17 280 3.9E-43 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_21130 376da3c0caa1330ceaea51c2d8c98e77 409 Gene3D G3DSA:3.40.640.10 34 294 4.8E-187 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_21130 376da3c0caa1330ceaea51c2d8c98e77 409 Gene3D G3DSA:3.90.1150.10 6 398 4.8E-187 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_21130 376da3c0caa1330ceaea51c2d8c98e77 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 406 1.8E-194 T 01-11-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DOE78_21130 376da3c0caa1330ceaea51c2d8c98e77 409 SUPERFAMILY SSF53383 2 401 7.45E-133 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_21130 376da3c0caa1330ceaea51c2d8c98e77 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE78_21130 376da3c0caa1330ceaea51c2d8c98e77 409 Pfam PF00266 Aminotransferase class-V 23 394 1.4E-164 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_21130 376da3c0caa1330ceaea51c2d8c98e77 409 PIRSF PIRSF005572 20 407 5.0E-57 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Gene3D G3DSA:2.30.30.40 97 164 5.6E-19 T 01-11-2018 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Gene3D G3DSA:2.30.30.40 322 391 2.3E-14 T 01-11-2018 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Gene3D G3DSA:2.30.30.40 245 317 5.8E-19 T 01-11-2018 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Gene3D G3DSA:2.30.30.40 25 96 1.7E-16 T 01-11-2018 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 PIRSF PIRSF037846 163 312 8.5E-29 T 01-11-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 PIRSF PIRSF037846 313 582 3.3E-95 T 01-11-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 PIRSF PIRSF037846 255 330 1.2E-16 T 01-11-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 PIRSF PIRSF037846 2 180 5.1E-43 T 01-11-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 SMART SM00287 102 163 2.3E-13 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 SMART SM00287 31 94 1.1E-13 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 SMART SM00287 174 235 3.0E-16 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 SMART SM00287 254 316 2.3E-13 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 SMART SM00287 327 391 2.3E-12 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Gene3D G3DSA:2.30.30.40 174 232 7.9E-19 T 01-11-2018 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 SUPERFAMILY SSF53187 408 581 9.73E-53 T 01-11-2018 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Gene3D G3DSA:3.40.630.40 408 582 4.7E-57 T 01-11-2018 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 SMART SM00646 470 578 4.4E-31 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 411 578 7.8E-48 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Pfam PF08239 Bacterial SH3 domain 112 160 1.5E-12 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Pfam PF08239 Bacterial SH3 domain 40 91 4.0E-11 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Pfam PF08239 Bacterial SH3 domain 183 233 1.2E-13 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Pfam PF08239 Bacterial SH3 domain 263 314 3.7E-15 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17775 02c0799974053f07d66b42a9db64b38f 582 Pfam PF08239 Bacterial SH3 domain 338 388 3.9E-10 T 01-11-2018 IPR003646 SH3-like domain, bacterial-type DOE78_17860 d2d37195e366468397b8385b9fb557a6 173 Gene3D G3DSA:3.30.70.1740 91 167 8.2E-33 T 01-11-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily DOE78_17860 d2d37195e366468397b8385b9fb557a6 173 Gene3D G3DSA:3.10.20.420 36 90 1.1E-24 T 01-11-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily DOE78_17860 d2d37195e366468397b8385b9fb557a6 173 Pfam PF08955 BofC C-terminal domain 91 163 6.5E-31 T 01-11-2018 IPR015050 Bypass of forespore C, C-terminal DOE78_17860 d2d37195e366468397b8385b9fb557a6 173 Pfam PF08977 Bypass of Forespore C, N terminal 39 88 4.2E-24 T 01-11-2018 IPR015071 Bypass-of-forespore C, N-terminal DOE78_20230 687cca00899d4b0613359a8365959874 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_20230 687cca00899d4b0613359a8365959874 318 Pfam PF00294 pfkB family carbohydrate kinase 25 316 1.8E-49 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_20230 687cca00899d4b0613359a8365959874 318 Gene3D G3DSA:3.40.1190.20 24 318 4.1E-67 T 01-11-2018 IPR029056 Ribokinase-like DOE78_20230 687cca00899d4b0613359a8365959874 318 SUPERFAMILY SSF53613 23 317 3.43E-63 T 01-11-2018 IPR029056 Ribokinase-like DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 SUPERFAMILY SSF52540 508 760 1.95E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 SMART SM00382 278 420 2.9E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 SMART SM00382 551 689 1.7E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 Gene3D G3DSA:1.10.8.60 687 768 1.5E-10 T 01-11-2018 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 282 412 5.4E-17 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 556 685 4.5E-15 T 01-11-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 SUPERFAMILY SSF52540 240 476 6.7E-33 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 Gene3D G3DSA:3.40.50.300 218 416 6.7E-53 T 01-11-2018 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 Gene3D G3DSA:3.40.50.300 493 686 3.5E-55 T 01-11-2018 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 636 648 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 674 693 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 554 569 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 606 625 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 592 606 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 728 740 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 657 674 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_13490 25c164bddb165c18eb43a03eef0a4e69 775 PRINTS PR00819 CbxX/CfqX superfamily signature 514 528 7.2E-49 T 01-11-2018 IPR000641 CbxX/CfqX GO:0005524 DOE78_08885 0f56964f60d7908c7ee872abb28ae6b3 666 Gene3D G3DSA:3.30.379.10 25 109 1.4E-10 T 01-11-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DOE78_08885 0f56964f60d7908c7ee872abb28ae6b3 666 Gene3D G3DSA:3.20.20.520 112 402 4.0E-67 T 01-11-2018 DOE78_08885 0f56964f60d7908c7ee872abb28ae6b3 666 Pfam PF15979 Glycosyl hydrolase family 115 109 433 1.9E-67 T 01-11-2018 IPR031924 Glycosyl hydrolase family 115 DOE78_08335 b588d2c85f8892e10884b507cffd6251 185 SUPERFAMILY SSF55194 4 184 1.83E-74 T 01-11-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DOE78_08335 b588d2c85f8892e10884b507cffd6251 185 Gene3D G3DSA:1.10.132.20 12 182 3.4E-71 T 01-11-2018 DOE78_08335 b588d2c85f8892e10884b507cffd6251 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.721 T 01-11-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DOE78_08335 b588d2c85f8892e10884b507cffd6251 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.2E-77 T 01-11-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DOE78_08335 b588d2c85f8892e10884b507cffd6251 185 Gene3D G3DSA:3.30.1360.40 31 105 3.4E-71 T 01-11-2018 DOE78_08335 b588d2c85f8892e10884b507cffd6251 185 Pfam PF01765 Ribosome recycling factor 22 183 1.1E-67 T 01-11-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DOE78_09010 83f081e593dc809645cb3ca619ba43fa 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 2.1E-11 T 01-11-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DOE78_09010 83f081e593dc809645cb3ca619ba43fa 255 SUPERFAMILY SSF52540 4 251 4.89E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09010 83f081e593dc809645cb3ca619ba43fa 255 Pfam PF00005 ABC transporter 21 181 4.8E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_09010 83f081e593dc809645cb3ca619ba43fa 255 Gene3D G3DSA:3.40.50.300 1 252 1.4E-60 T 01-11-2018 DOE78_09010 83f081e593dc809645cb3ca619ba43fa 255 SMART SM00382 29 228 1.7E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 SUPERFAMILY SSF52540 8 232 8.74E-55 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 SUPERFAMILY SSF52540 248 490 1.16E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 SMART SM00382 33 229 0.0021 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 SMART SM00382 283 477 0.61 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 Gene3D G3DSA:3.40.50.300 251 504 2.8E-39 T 01-11-2018 DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 Gene3D G3DSA:3.40.50.300 1 250 2.2E-55 T 01-11-2018 DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 Pfam PF00005 ABC transporter 24 173 3.8E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_20050 e8154bc1cd936db037f07842d9cc0749 505 Pfam PF00005 ABC transporter 275 428 2.7E-17 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 Pfam PF13416 Bacterial extracellular solute-binding protein 65 367 2.2E-52 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 Gene3D G3DSA:3.40.190.10 157 413 4.2E-112 T 01-11-2018 DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 SUPERFAMILY SSF53850 50 417 9.83E-92 T 01-11-2018 DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 PRINTS PR00181 Maltose binding protein signature 148 167 2.9E-5 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 PRINTS PR00181 Maltose binding protein signature 169 188 2.9E-5 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 PRINTS PR00181 Maltose binding protein signature 255 274 2.9E-5 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 PRINTS PR00181 Maltose binding protein signature 380 399 2.9E-5 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DOE78_06265 2824d55512db086e296312c6dcf9f17d 427 Gene3D G3DSA:3.40.190.10 61 380 4.2E-112 T 01-11-2018 DOE78_15295 28cb2ad9f746d0302facb76e032c527c 149 Pfam PF13115 YtkA-like 31 109 3.2E-15 T 01-11-2018 IPR032693 YtkA-like domain DOE78_02100 f641a25895effbcab7b1fb2c4396aada 444 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 249 414 5.0E-29 T 01-11-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain DOE78_02100 f641a25895effbcab7b1fb2c4396aada 444 Gene3D G3DSA:3.40.50.10840 3 232 1.8E-69 T 01-11-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DOE78_02100 f641a25895effbcab7b1fb2c4396aada 444 Gene3D G3DSA:3.40.980.20 236 425 1.1E-29 T 01-11-2018 DOE78_02100 f641a25895effbcab7b1fb2c4396aada 444 Pfam PF07005 Putative sugar-binding N-terminal domain 3 225 1.6E-59 T 01-11-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DOE78_02100 f641a25895effbcab7b1fb2c4396aada 444 SUPERFAMILY SSF142764 4 421 4.84E-98 T 01-11-2018 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 SUPERFAMILY SSF118215 8 400 5.1E-118 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 1.4E-31 T 01-11-2018 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 PRINTS PR00173 Glutamate-aspartate symporter signature 143 165 1.4E-31 T 01-11-2018 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.4E-31 T 01-11-2018 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 1.4E-31 T 01-11-2018 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.4E-31 T 01-11-2018 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 PRINTS PR00173 Glutamate-aspartate symporter signature 43 63 1.4E-31 T 01-11-2018 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 Pfam PF00375 Sodium:dicarboxylate symporter family 8 398 1.4E-109 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 Gene3D G3DSA:1.10.3860.10 2 417 3.5E-124 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DOE78_22515 e2f6be729cb4dba9fcd1dd3d830b37fc 420 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 293 316 - T 01-11-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 SUPERFAMILY SSF56601 247 674 3.82E-102 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 Pfam PF00912 Transglycosylase 83 262 3.5E-63 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 SUPERFAMILY SSF53955 73 291 1.29E-71 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 Gene3D G3DSA:3.90.1310.20 79 540 3.0E-204 T 01-11-2018 DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 Gene3D G3DSA:1.10.3810.10 93 290 3.0E-204 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 93 644 1.9E-174 T 01-11-2018 DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 Gene3D G3DSA:3.40.710.10 328 653 3.0E-204 T 01-11-2018 DOE78_11185 fd2437638738b31ff78a8b07f870128d 717 Pfam PF00905 Penicillin binding protein transpeptidase domain 354 640 1.1E-45 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_15640 58011dee7dd429a9c0769605fa7591ec 533 Pfam PF07905 Purine catabolism regulatory protein-like family 5 124 1.6E-32 T 01-11-2018 IPR012914 Purine catabolism PurC-like domain DOE78_15640 58011dee7dd429a9c0769605fa7591ec 533 Pfam PF13556 PucR C-terminal helix-turn-helix domain 469 527 1.4E-22 T 01-11-2018 IPR025736 PucR C-terminal helix-turn-helix domain DOE78_15640 58011dee7dd429a9c0769605fa7591ec 533 Gene3D G3DSA:1.10.10.2840 402 532 6.2E-18 T 01-11-2018 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 88 2.0E-20 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 134 153 2.0E-20 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 2.0E-20 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 SUPERFAMILY SSF51306 27 179 1.99E-51 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily DOE78_04830 455f26abbc866a9f226b0933df40645d 181 ProSitePatterns PS00761 Signal peptidases I signature 3. 139 152 - T 01-11-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 Gene3D G3DSA:2.10.109.10 55 179 3.6E-42 T 01-11-2018 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 Pfam PF00717 Peptidase S24-like 36 100 5.0E-21 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DOE78_04830 455f26abbc866a9f226b0933df40645d 181 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 174 1.2E-49 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 01-11-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DOE78_04830 455f26abbc866a9f226b0933df40645d 181 ProSitePatterns PS00760 Signal peptidases I lysine active site. 78 90 - T 01-11-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DOE78_12275 43e2bc55e05bf6f88fc38d8ff9826505 335 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 236 3.0E-9 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_12275 43e2bc55e05bf6f88fc38d8ff9826505 335 Gene3D G3DSA:3.40.50.720 6 318 1.2E-78 T 01-11-2018 DOE78_12275 43e2bc55e05bf6f88fc38d8ff9826505 335 SUPERFAMILY SSF55347 129 296 3.6E-28 T 01-11-2018 DOE78_12275 43e2bc55e05bf6f88fc38d8ff9826505 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 122 1.0E-25 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_12275 43e2bc55e05bf6f88fc38d8ff9826505 335 SUPERFAMILY SSF51735 3 154 1.04E-45 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_12275 43e2bc55e05bf6f88fc38d8ff9826505 335 Gene3D G3DSA:3.30.360.10 127 335 1.2E-78 T 01-11-2018 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 Gene3D G3DSA:3.80.30.20 214 447 2.1E-91 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 70 507 73.919 T 01-11-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 Pfam PF04055 Radical SAM superfamily 219 390 3.3E-34 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 Pfam PF01938 TRAM domain 444 506 7.6E-16 T 01-11-2018 IPR002792 TRAM domain DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 Gene3D G3DSA:3.40.50.12160 70 205 7.6E-35 T 01-11-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 Pfam PF00919 Uncharacterized protein family UPF0004 71 172 5.1E-29 T 01-11-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 71 506 4.9E-209 T 01-11-2018 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 SUPERFAMILY SSF102114 202 437 5.62E-65 T 01-11-2018 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 219 239 - T 01-11-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 SMART SM00729 215 433 5.8E-68 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_08590 3377acce56d6124ffb0c856cd958c47b 515 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 71 503 1.4E-164 T 01-11-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DOE78_02000 0aba4260e2b3705b8217835388566bea 461 Pfam PF01938 TRAM domain 8 62 1.5E-12 T 01-11-2018 IPR002792 TRAM domain DOE78_02000 0aba4260e2b3705b8217835388566bea 461 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 386 417 - T 01-11-2018 IPR030390 RNA methyltransferase TrmA, active site DOE78_02000 0aba4260e2b3705b8217835388566bea 461 SUPERFAMILY SSF53335 72 453 1.42E-91 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_02000 0aba4260e2b3705b8217835388566bea 461 SUPERFAMILY SSF50249 3 63 8.0E-17 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_02000 0aba4260e2b3705b8217835388566bea 461 Gene3D G3DSA:3.40.1350.30 132 287 1.8E-127 T 01-11-2018 DOE78_02000 0aba4260e2b3705b8217835388566bea 461 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 277 449 3.8E-18 T 01-11-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DOE78_02000 0aba4260e2b3705b8217835388566bea 461 Gene3D G3DSA:3.40.50.150 85 450 1.8E-127 T 01-11-2018 DOE78_02000 0aba4260e2b3705b8217835388566bea 461 Gene3D G3DSA:2.40.50.140 2 83 8.0E-23 T 01-11-2018 DOE78_02000 0aba4260e2b3705b8217835388566bea 461 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 448 1.4E-187 T 01-11-2018 DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 105 182 1.5E-12 T 01-11-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 Gene3D G3DSA:3.20.20.80 203 623 2.2E-173 T 01-11-2018 DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 SMART SM00642 248 614 2.2E-7 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 Gene3D G3DSA:2.60.40.2320 1 97 9.7E-33 T 01-11-2018 DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 Gene3D G3DSA:2.60.40.1180 624 712 7.8E-17 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 Gene3D G3DSA:2.60.40.10 98 202 5.1E-26 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 96 685 7.7E-248 T 01-11-2018 IPR011840 Pullulanase, type I DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 SUPERFAMILY SSF51445 213 621 2.4E-122 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 SUPERFAMILY SSF81296 98 201 3.0E-21 T 01-11-2018 IPR014756 Immunoglobulin E-set DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 Pfam PF00128 Alpha amylase, catalytic domain 377 575 1.5E-8 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_19315 6f34eb077e97d6978aaf1d34a8a129e8 712 Pfam PF00128 Alpha amylase, catalytic domain 259 343 1.5E-6 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_07530 ca1749584f1d51dce0459d0a3e84a492 143 Pfam PF00571 CBS domain 6 54 9.7E-11 T 01-11-2018 IPR000644 CBS domain DOE78_07530 ca1749584f1d51dce0459d0a3e84a492 143 Pfam PF00571 CBS domain 68 118 4.8E-15 T 01-11-2018 IPR000644 CBS domain DOE78_07530 ca1749584f1d51dce0459d0a3e84a492 143 Gene3D G3DSA:3.10.580.10 1 142 1.0E-37 T 01-11-2018 DOE78_07530 ca1749584f1d51dce0459d0a3e84a492 143 SMART SM00116 11 58 3.5E-8 T 01-11-2018 IPR000644 CBS domain DOE78_07530 ca1749584f1d51dce0459d0a3e84a492 143 SMART SM00116 75 122 6.9E-11 T 01-11-2018 IPR000644 CBS domain DOE78_07530 ca1749584f1d51dce0459d0a3e84a492 143 SUPERFAMILY SSF54631 2 117 1.39E-33 T 01-11-2018 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 Pfam PF04545 Sigma-70, region 4 173 223 4.6E-16 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 Pfam PF04542 Sigma-70 region 2 54 123 1.2E-16 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 PIRSF PIRSF000770 3 241 1.1E-90 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 Gene3D G3DSA:1.10.10.10 166 235 3.1E-14 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 Gene3D G3DSA:1.20.120.1810 20 123 1.1E-23 T 01-11-2018 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 5.2E-31 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 PRINTS PR00046 Major sigma-70 factor signature 78 91 2.0E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 PRINTS PR00046 Major sigma-70 factor signature 197 212 2.0E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 PRINTS PR00046 Major sigma-70 factor signature 176 188 2.0E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 PRINTS PR00046 Major sigma-70 factor signature 212 223 2.0E-13 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 5 228 2.0E-113 T 01-11-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 SUPERFAMILY SSF88659 139 225 1.49E-18 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_17620 8b9c441028d549f18f26bb30b311aad0 241 SUPERFAMILY SSF88946 8 120 1.44E-33 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_22125 552cb035919881982a833c0f8d680705 85 Gene3D G3DSA:3.30.1340.10 1 85 7.9E-35 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_22125 552cb035919881982a833c0f8d680705 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 01-11-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DOE78_22125 552cb035919881982a833c0f8d680705 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.1E-30 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_22125 552cb035919881982a833c0f8d680705 85 SUPERFAMILY SSF55594 3 83 1.44E-27 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_22125 552cb035919881982a833c0f8d680705 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.1E-19 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_22125 552cb035919881982a833c0f8d680705 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.1E-19 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_22125 552cb035919881982a833c0f8d680705 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.1E-19 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_22125 552cb035919881982a833c0f8d680705 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 6.7E-30 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_20885 41180378f84790c8f8fb0922c11614bb 126 Pfam PF03061 Thioesterase superfamily 36 113 4.4E-16 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DOE78_20885 41180378f84790c8f8fb0922c11614bb 126 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 6 121 1.1E-36 T 01-11-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DOE78_20885 41180378f84790c8f8fb0922c11614bb 126 Gene3D G3DSA:3.10.129.10 1 126 7.0E-53 T 01-11-2018 DOE78_20885 41180378f84790c8f8fb0922c11614bb 126 SUPERFAMILY SSF54637 5 125 2.83E-31 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 Pfam PF13646 HEAT repeats 266 342 5.3E-12 T 01-11-2018 DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 SMART SM00932 4 90 4.2E-25 T 01-11-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 Gene3D G3DSA:1.25.10.10 189 373 1.5E-26 T 01-11-2018 IPR011989 Armadillo-like helical DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 SMART SM00567 E-Z type HEAT repeats 247 276 0.17 T 01-11-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 SMART SM00567 E-Z type HEAT repeats 217 245 920.0 T 01-11-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 SMART SM00567 E-Z type HEAT repeats 309 338 1.2E-5 T 01-11-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 SMART SM00567 E-Z type HEAT repeats 278 307 8.3 T 01-11-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 SUPERFAMILY SSF48371 212 370 6.14E-33 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 Gene3D G3DSA:3.30.1370.70 1 91 2.2E-27 T 01-11-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 Pfam PF13769 Virulence factor 108 188 4.0E-30 T 01-11-2018 IPR025989 Virulence factor domain DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 SUPERFAMILY SSF110836 2 85 5.75E-22 T 01-11-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DOE78_15575 38169f1ec25bdb95ca19501f7eb18380 374 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 84 6.2E-19 T 01-11-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DOE78_21755 471205dd2bda00b5625746d72769702d 331 PRINTS PR00990 Ribokinase signature 32 51 8.9E-6 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_21755 471205dd2bda00b5625746d72769702d 331 PRINTS PR00990 Ribokinase signature 226 237 8.9E-6 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_21755 471205dd2bda00b5625746d72769702d 331 PRINTS PR00990 Ribokinase signature 187 202 8.9E-6 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_21755 471205dd2bda00b5625746d72769702d 331 Pfam PF00294 pfkB family carbohydrate kinase 6 313 1.4E-73 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_21755 471205dd2bda00b5625746d72769702d 331 SUPERFAMILY SSF53613 4 319 3.43E-79 T 01-11-2018 IPR029056 Ribokinase-like DOE78_21755 471205dd2bda00b5625746d72769702d 331 Gene3D G3DSA:3.40.1190.20 2 329 1.0E-86 T 01-11-2018 IPR029056 Ribokinase-like DOE78_23775 4baae205ef7d04ba8586d76fc8b02715 148 Gene3D G3DSA:3.40.630.30 4 136 1.2E-8 T 01-11-2018 DOE78_23775 4baae205ef7d04ba8586d76fc8b02715 148 SUPERFAMILY SSF55729 3 123 1.36E-6 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_23320 090c149795f9d9f956b702e86885e94c 305 Gene3D G3DSA:1.10.3210.10 113 305 8.9E-66 T 01-11-2018 DOE78_23320 090c149795f9d9f956b702e86885e94c 305 SMART SM00471 129 266 9.7E-8 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_23320 090c149795f9d9f956b702e86885e94c 305 SUPERFAMILY SSF109604 122 295 4.08E-36 T 01-11-2018 DOE78_23320 090c149795f9d9f956b702e86885e94c 305 Pfam PF13487 HD domain 184 247 1.3E-17 T 01-11-2018 DOE78_11200 11e6ede100dc40b7cb85a3365c4e0fb6 190 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 99 3.2E-5 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DOE78_11200 11e6ede100dc40b7cb85a3365c4e0fb6 190 SUPERFAMILY SSF50475 8 112 2.26E-8 T 01-11-2018 DOE78_11200 11e6ede100dc40b7cb85a3365c4e0fb6 190 Gene3D G3DSA:2.30.110.10 4 129 8.4E-15 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 DOE78_02800 896d92f0a0ea51366a407e885e88c6ab 400 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 379 1.9E-41 T 01-11-2018 IPR000160 GGDEF domain DOE78_02800 896d92f0a0ea51366a407e885e88c6ab 400 SMART SM00267 213 384 8.3E-49 T 01-11-2018 IPR000160 GGDEF domain DOE78_02800 896d92f0a0ea51366a407e885e88c6ab 400 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 381 1.1E-43 T 01-11-2018 IPR000160 GGDEF domain DOE78_02800 896d92f0a0ea51366a407e885e88c6ab 400 SUPERFAMILY SSF55073 229 381 3.06E-42 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_02800 896d92f0a0ea51366a407e885e88c6ab 400 Gene3D G3DSA:3.30.70.270 212 382 2.3E-49 T 01-11-2018 DOE78_18270 21f1551d214ed485a5b93da4a5706df7 135 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 5.9E-14 T 01-11-2018 IPR007140 Protein of unknown function DUF350 DOE78_18270 21f1551d214ed485a5b93da4a5706df7 135 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 1.4E-15 T 01-11-2018 IPR007140 Protein of unknown function DUF350 DOE78_07785 05d3793a2c396de20f63614c9e8643cc 224 Pfam PF01168 Alanine racemase, N-terminal domain 10 223 9.7E-18 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_07785 05d3793a2c396de20f63614c9e8643cc 224 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 224 1.5E-52 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DOE78_07785 05d3793a2c396de20f63614c9e8643cc 224 Gene3D G3DSA:3.20.20.10 1 224 1.5E-76 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_07785 05d3793a2c396de20f63614c9e8643cc 224 PIRSF PIRSF004848 1 224 1.1E-65 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DOE78_07785 05d3793a2c396de20f63614c9e8643cc 224 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DOE78_07785 05d3793a2c396de20f63614c9e8643cc 224 SUPERFAMILY SSF51419 1 223 4.65E-71 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_07785 05d3793a2c396de20f63614c9e8643cc 224 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 224 27.711 T 01-11-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 SUPERFAMILY SSF46785 5 78 1.96E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 5.9E-28 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 5.9E-28 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 5.9E-28 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 5.9E-28 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 4.0E-21 T 01-11-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 145 6.6E-27 T 01-11-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 SUPERFAMILY SSF55252 80 149 3.14E-21 T 01-11-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 Gene3D G3DSA:3.30.1360.40 68 149 9.6E-32 T 01-11-2018 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 1.0E-29 T 01-11-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 Gene3D G3DSA:1.10.10.10 4 67 2.7E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 2.0E-54 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DOE78_16830 e67592fd0cf08caf716ca731a84ae5df 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 69.877 T 01-11-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 SUPERFAMILY SSF46785 3 82 3.23E-12 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 Gene3D G3DSA:1.10.10.10 3 84 2.4E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 188 5.0E-58 T 01-11-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 169 3.5E-56 T 01-11-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 Gene3D G3DSA:1.10.10.10 85 181 1.4E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 Hamap MF_01804 Segregation and condensation protein B [scpB]. 4 185 35.797 T 01-11-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 SUPERFAMILY SSF46785 87 160 2.94E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_16370 aa79517b140d5e9d627e61f9e67407fd 195 PIRSF PIRSF019345 2 194 6.4E-54 T 01-11-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 SUPERFAMILY SSF51215 56 211 6.15E-14 T 01-11-2018 IPR037923 Transcription regulator HTH-like DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 SUPERFAMILY SSF46689 280 329 1.75E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 Gene3D G3DSA:1.10.10.60 276 329 3.8E-16 T 01-11-2018 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 Gene3D G3DSA:1.10.10.60 228 275 3.9E-11 T 01-11-2018 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 4.6E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 4.6E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 Gene3D G3DSA:2.60.120.10 49 133 1.5E-11 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 SMART SM00342 243 326 2.2E-29 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 Pfam PF07883 Cupin domain 64 117 7.9E-9 T 01-11-2018 IPR013096 Cupin 2, conserved barrel DOE78_11890 934d114a0491d3cd89c19698fdd63c5f 330 Pfam PF12833 Helix-turn-helix domain 249 327 6.7E-20 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 607 5.4E-46 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 Gene3D G3DSA:1.10.287.950 356 655 3.5E-72 T 01-11-2018 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 SUPERFAMILY SSF103190 84 186 5.1E-10 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 Gene3D G3DSA:3.30.450.20 67 264 1.0E-34 T 01-11-2018 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 Pfam PF02743 Cache domain 38 260 2.3E-25 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 SMART SM00304 299 351 1.2E-15 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 SUPERFAMILY SSF58104 319 655 2.62E-76 T 01-11-2018 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 Gene3D G3DSA:1.10.8.500 299 350 6.7E-11 T 01-11-2018 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 Gene3D G3DSA:3.30.450.20 73 179 1.0E-34 T 01-11-2018 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 SMART SM00283 380 655 3.7E-75 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_10545 ad6b7370dc1d0a28c5bda9bb61a69de6 656 Pfam PF00672 HAMP domain 299 347 2.7E-13 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_23230 30ecd79fdacb82558a398855376a148a 370 SUPERFAMILY SSF53756 27 368 1.92E-56 T 01-11-2018 DOE78_23230 30ecd79fdacb82558a398855376a148a 370 Pfam PF00534 Glycosyl transferases group 1 199 352 4.2E-32 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23230 30ecd79fdacb82558a398855376a148a 370 Gene3D G3DSA:3.40.50.2000 173 358 3.3E-50 T 01-11-2018 DOE78_23230 30ecd79fdacb82558a398855376a148a 370 Pfam PF13439 Glycosyltransferase Family 4 27 177 2.4E-7 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_23230 30ecd79fdacb82558a398855376a148a 370 Gene3D G3DSA:3.40.50.2000 27 367 3.3E-50 T 01-11-2018 DOE78_15055 8e09b94dcc7673d9671bf6d7ec34da45 262 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 25 250 29.537 T 01-11-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DOE78_15055 8e09b94dcc7673d9671bf6d7ec34da45 262 SUPERFAMILY SSF51366 1 252 1.04E-75 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_15055 8e09b94dcc7673d9671bf6d7ec34da45 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 1.8E-86 T 01-11-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DOE78_15055 8e09b94dcc7673d9671bf6d7ec34da45 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 47 63 - T 01-11-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DOE78_15055 8e09b94dcc7673d9671bf6d7ec34da45 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 32.713 T 01-11-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DOE78_15055 8e09b94dcc7673d9671bf6d7ec34da45 262 Gene3D G3DSA:3.20.20.70 1 256 3.2E-93 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 SUPERFAMILY SSF46689 219 267 2.55E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 Pfam PF12833 Helix-turn-helix domain 189 267 3.3E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 Gene3D G3DSA:1.10.10.60 217 269 5.9E-17 T 01-11-2018 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 Gene3D G3DSA:1.10.10.60 166 216 2.8E-14 T 01-11-2018 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 SUPERFAMILY SSF51215 19 152 2.35E-7 T 01-11-2018 IPR037923 Transcription regulator HTH-like DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 SMART SM00342 183 266 6.2E-31 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 262 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 3.8E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 3.8E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_19810 036aba0f0dc7980830c1771553127ce0 270 SUPERFAMILY SSF46689 170 217 5.73E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 SUPERFAMILY SSF46785 37 165 1.13E-27 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 93 127 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 144 164 9.2E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 94 9.2E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 110 9.2E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 130 9.2E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 Pfam PF01047 MarR family 61 118 1.8E-14 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 Gene3D G3DSA:1.10.10.10 16 169 9.1E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10025 cab0ee39ad8c61d61a82b187ffca21ef 170 SMART SM00347 54 154 1.3E-27 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_24670 33d0526a9cc5ed564d9b516db7b89a9f 212 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 44 183 2.3E-67 T 01-11-2018 IPR009665 Protein of unknown function DUF1256 DOE78_24670 33d0526a9cc5ed564d9b516db7b89a9f 212 Pfam PF06866 Protein of unknown function (DUF1256) 18 182 3.5E-67 T 01-11-2018 IPR009665 Protein of unknown function DUF1256 DOE78_24670 33d0526a9cc5ed564d9b516db7b89a9f 212 SUPERFAMILY SSF53163 16 201 5.75E-56 T 01-11-2018 IPR023430 Peptidase HybD-like domain superfamily DOE78_03955 5a6a2c54cb980b5528ce48e54f91f283 427 Gene3D G3DSA:3.40.190.10 57 379 5.8E-105 T 01-11-2018 DOE78_03955 5a6a2c54cb980b5528ce48e54f91f283 427 Gene3D G3DSA:3.40.190.10 153 412 5.8E-105 T 01-11-2018 DOE78_03955 5a6a2c54cb980b5528ce48e54f91f283 427 PRINTS PR00181 Maltose binding protein signature 379 398 3.4E-6 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DOE78_03955 5a6a2c54cb980b5528ce48e54f91f283 427 PRINTS PR00181 Maltose binding protein signature 144 163 3.4E-6 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DOE78_03955 5a6a2c54cb980b5528ce48e54f91f283 427 PRINTS PR00181 Maltose binding protein signature 254 273 3.4E-6 T 01-11-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DOE78_03955 5a6a2c54cb980b5528ce48e54f91f283 427 Pfam PF13416 Bacterial extracellular solute-binding protein 61 366 5.5E-50 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_03955 5a6a2c54cb980b5528ce48e54f91f283 427 SUPERFAMILY SSF53850 55 416 4.78E-83 T 01-11-2018 DOE78_02105 1123b28611369a867a164622aa7ff5f4 334 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 324 4.1E-103 T 01-11-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DOE78_02105 1123b28611369a867a164622aa7ff5f4 334 Gene3D G3DSA:3.40.718.10 1 330 1.0E-135 T 01-11-2018 DOE78_02105 1123b28611369a867a164622aa7ff5f4 334 SUPERFAMILY SSF53659 2 329 6.91E-105 T 01-11-2018 DOE78_02105 1123b28611369a867a164622aa7ff5f4 334 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 327 1.1E-105 T 01-11-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DOE78_10405 129f3acabc20620984cd59462379e29c 293 SUPERFAMILY SSF81301 1 137 6.21E-41 T 01-11-2018 DOE78_10405 129f3acabc20620984cd59462379e29c 293 Gene3D G3DSA:1.20.120.330 152 291 6.1E-41 T 01-11-2018 DOE78_10405 129f3acabc20620984cd59462379e29c 293 Gene3D G3DSA:3.30.460.10 9 151 1.1E-47 T 01-11-2018 DOE78_10405 129f3acabc20620984cd59462379e29c 293 Pfam PF04439 Streptomycin adenylyltransferase 1 282 1.7E-112 T 01-11-2018 IPR007530 Aminoglycoside 6-adenylyltransferase DOE78_10405 129f3acabc20620984cd59462379e29c 293 SUPERFAMILY SSF81631 140 284 6.67E-50 T 01-11-2018 DOE78_10405 129f3acabc20620984cd59462379e29c 293 PIRSF PIRSF000812 1 288 2.4E-97 T 01-11-2018 IPR007530 Aminoglycoside 6-adenylyltransferase DOE78_18495 b6192c84cdf71e5d93d9d72fb9ed46e9 204 SUPERFAMILY SSF46785 4 74 5.91E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_18495 b6192c84cdf71e5d93d9d72fb9ed46e9 204 Gene3D G3DSA:1.10.10.10 6 137 3.4E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_18495 b6192c84cdf71e5d93d9d72fb9ed46e9 204 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 6.1E-21 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_18495 b6192c84cdf71e5d93d9d72fb9ed46e9 204 SMART SM00345 11 70 3.7E-23 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_18495 b6192c84cdf71e5d93d9d72fb9ed46e9 204 SUPERFAMILY SSF48008 94 195 5.23E-6 T 01-11-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DOE78_18495 b6192c84cdf71e5d93d9d72fb9ed46e9 204 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_18495 b6192c84cdf71e5d93d9d72fb9ed46e9 204 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.5E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_21140 95a30e3311e8bc2a118ca3a9dcc25bc8 261 Pfam PF00005 ABC transporter 21 173 2.1E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_21140 95a30e3311e8bc2a118ca3a9dcc25bc8 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_21140 95a30e3311e8bc2a118ca3a9dcc25bc8 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 8.1E-114 T 01-11-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 DOE78_21140 95a30e3311e8bc2a118ca3a9dcc25bc8 261 Gene3D G3DSA:3.40.50.300 5 250 1.6E-56 T 01-11-2018 DOE78_21140 95a30e3311e8bc2a118ca3a9dcc25bc8 261 SUPERFAMILY SSF52540 6 233 1.49E-43 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21140 95a30e3311e8bc2a118ca3a9dcc25bc8 261 SMART SM00382 30 225 5.2E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_23605 31f3f4f684a6e965a305c3249a8882ec 435 Gene3D G3DSA:3.65.10.10 6 416 3.0E-172 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DOE78_23605 31f3f4f684a6e965a305c3249a8882ec 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 4.2E-112 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DOE78_23605 31f3f4f684a6e965a305c3249a8882ec 435 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 45.048 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_23605 31f3f4f684a6e965a305c3249a8882ec 435 Gene3D G3DSA:3.65.10.10 20 232 3.0E-172 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DOE78_23605 31f3f4f684a6e965a305c3249a8882ec 435 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 417 4.7E-174 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_23605 31f3f4f684a6e965a305c3249a8882ec 435 SUPERFAMILY SSF55205 2 418 1.85E-139 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DOE78_00390 47ad018708407d8d2e9ee050c84c6df1 339 SMART SM00220 27 262 6.1E-6 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DOE78_00390 47ad018708407d8d2e9ee050c84c6df1 339 Gene3D G3DSA:1.10.510.10 108 261 1.1E-22 T 01-11-2018 DOE78_00390 47ad018708407d8d2e9ee050c84c6df1 339 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 33 54 - T 01-11-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 DOE78_00390 47ad018708407d8d2e9ee050c84c6df1 339 SUPERFAMILY SSF56112 12 232 2.73E-23 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_00390 47ad018708407d8d2e9ee050c84c6df1 339 Pfam PF00069 Protein kinase domain 27 244 5.5E-13 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DOE78_00390 47ad018708407d8d2e9ee050c84c6df1 339 Gene3D G3DSA:3.30.200.20 17 107 1.1E-22 T 01-11-2018 DOE78_05470 d03c02d2a96509db356826619f6c5e0e 109 SUPERFAMILY SSF52091 6 107 2.75E-20 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_05470 d03c02d2a96509db356826619f6c5e0e 109 Gene3D G3DSA:3.30.750.24 4 109 4.5E-23 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_05470 d03c02d2a96509db356826619f6c5e0e 109 Pfam PF01740 STAS domain 5 103 5.2E-15 T 01-11-2018 IPR002645 STAS domain DOE78_05470 d03c02d2a96509db356826619f6c5e0e 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 12 102 1.5E-15 T 01-11-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 DOE78_07115 e5c6178cf2d57fef9b197022811d0349 564 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 14 560 5.8E-228 T 01-11-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related DOE78_07115 e5c6178cf2d57fef9b197022811d0349 564 Gene3D G3DSA:1.10.1370.30 1 564 5.7E-217 T 01-11-2018 DOE78_07115 e5c6178cf2d57fef9b197022811d0349 564 SUPERFAMILY SSF55486 33 558 5.86E-127 T 01-11-2018 DOE78_16965 4e4956de441127e01a6be7624a31fef8 174 Pfam PF11085 Conserved membrane protein YqhR 3 165 1.4E-68 T 01-11-2018 IPR024563 Uncharacterised protein family YqhR DOE78_16965 4e4956de441127e01a6be7624a31fef8 174 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 7 161 2.0E-28 T 01-11-2018 IPR024563 Uncharacterised protein family YqhR DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 SUPERFAMILY SSF56327 168 433 9.35E-73 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 Gene3D G3DSA:3.90.1820.20 1 429 4.2E-142 T 01-11-2018 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 3.0E-67 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 1.1E-36 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.1E-36 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 1.1E-36 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 1.1E-36 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 1.1E-36 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 1.1E-36 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 1.1E-36 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 169 - T 01-11-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 SUPERFAMILY SSF51735 2 167 1.74E-54 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11885 76fb4ad710e89bac2823dce722f2809e 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 405 9.4E-63 T 01-11-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 SUPERFAMILY SSF51445 1 315 3.05E-88 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 317 586 9.3E-48 T 01-11-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 SMART SM01217 622 693 3.6E-27 T 01-11-2018 IPR026891 Fibronectin type III-like domain DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 36 283 5.0E-53 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 Gene3D G3DSA:2.60.40.10 589 711 1.1E-33 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 Gene3D G3DSA:3.40.50.1700 301 588 1.0E-104 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 SUPERFAMILY SSF52279 317 589 4.58E-46 T 01-11-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 Pfam PF14310 Fibronectin type III-like domain 622 693 4.7E-23 T 01-11-2018 IPR026891 Fibronectin type III-like domain DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 Gene3D G3DSA:3.20.20.300 1 293 1.5E-113 T 01-11-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 147 163 1.6E-34 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 37 53 1.6E-34 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 70 89 1.6E-34 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 116 132 1.6E-34 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_20225 9e59fe2cefb50ba849c190104bec5d94 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 217 235 1.6E-34 T 01-11-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DOE78_18425 783a31301756ef7b1f63e8d7cbe015dd 321 Pfam PF01145 SPFH domain / Band 7 family 30 217 1.5E-26 T 01-11-2018 IPR001107 Band 7 domain DOE78_18425 783a31301756ef7b1f63e8d7cbe015dd 321 SUPERFAMILY SSF117892 60 195 3.14E-22 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily DOE78_18425 783a31301756ef7b1f63e8d7cbe015dd 321 Gene3D G3DSA:3.30.479.30 85 192 3.3E-21 T 01-11-2018 DOE78_18425 783a31301756ef7b1f63e8d7cbe015dd 321 SMART SM00244 26 202 3.8E-26 T 01-11-2018 IPR001107 Band 7 domain DOE78_18425 783a31301756ef7b1f63e8d7cbe015dd 321 TIGRFAM TIGR01933 hflK: HflK protein 29 302 2.4E-72 T 01-11-2018 IPR010201 HflK GO:0016021 DOE78_00840 e2ca702fd5a38a79e8d55fb73b87f9de 72 SUPERFAMILY SSF50249 1 71 1.03E-28 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_00840 e2ca702fd5a38a79e8d55fb73b87f9de 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.0E-28 T 01-11-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DOE78_00840 e2ca702fd5a38a79e8d55fb73b87f9de 72 Gene3D G3DSA:2.40.50.140 1 72 3.7E-38 T 01-11-2018 DOE78_00840 e2ca702fd5a38a79e8d55fb73b87f9de 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.1E-39 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DOE78_00840 e2ca702fd5a38a79e8d55fb73b87f9de 72 SMART SM00316 4 72 6.2E-6 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_00840 e2ca702fd5a38a79e8d55fb73b87f9de 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.357 T 01-11-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DOE78_04510 5e2b6a3036e49e758469f6bd10b27b2d 336 Pfam PF00535 Glycosyl transferase family 2 3 124 2.4E-14 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_04510 5e2b6a3036e49e758469f6bd10b27b2d 336 Pfam PF04138 GtrA-like protein 222 336 1.5E-12 T 01-11-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DOE78_04510 5e2b6a3036e49e758469f6bd10b27b2d 336 SUPERFAMILY SSF53448 3 221 1.27E-18 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_04510 5e2b6a3036e49e758469f6bd10b27b2d 336 Gene3D G3DSA:3.90.550.10 1 219 1.1E-21 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_01670 8331ddcb0f0131a31762b935d65e3195 571 SMART SM00283 295 570 7.3E-71 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_01670 8331ddcb0f0131a31762b935d65e3195 571 SMART SM00304 213 266 0.0026 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_01670 8331ddcb0f0131a31762b935d65e3195 571 SUPERFAMILY SSF58104 238 569 7.19E-69 T 01-11-2018 DOE78_01670 8331ddcb0f0131a31762b935d65e3195 571 Gene3D G3DSA:1.10.287.950 245 570 3.1E-69 T 01-11-2018 DOE78_01670 8331ddcb0f0131a31762b935d65e3195 571 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 524 8.9E-43 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 Gene3D G3DSA:2.60.120.1460 19 228 2.3E-55 T 01-11-2018 DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 3.9E-6 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 3.9E-6 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 SMART SM00419 170 222 4.2E-8 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 SUPERFAMILY SSF51206 9 144 4.45E-35 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 Pfam PF13545 Crp-like helix-turn-helix domain 155 213 4.3E-14 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 SUPERFAMILY SSF46785 151 224 2.31E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 Pfam PF00027 Cyclic nucleotide-binding domain 34 118 4.2E-17 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_15850 bec03562d597662248cf3ff1db84ec8c 229 SMART SM00100 15 136 2.2E-18 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_19320 0a4cd959adbeca16600d1262ad44ab08 322 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 305 3.9E-54 T 01-11-2018 IPR005218 Diacylglycerol/lipid kinase DOE78_19320 0a4cd959adbeca16600d1262ad44ab08 322 Gene3D G3DSA:2.60.200.40 128 300 1.2E-40 T 01-11-2018 DOE78_19320 0a4cd959adbeca16600d1262ad44ab08 322 SMART SM00046 3 130 1.1E-7 T 01-11-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DOE78_19320 0a4cd959adbeca16600d1262ad44ab08 322 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 121 8.7E-27 T 01-11-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DOE78_19320 0a4cd959adbeca16600d1262ad44ab08 322 Gene3D G3DSA:3.40.50.10330 1 127 9.6E-33 T 01-11-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DOE78_19320 0a4cd959adbeca16600d1262ad44ab08 322 SUPERFAMILY SSF111331 1 307 2.05E-68 T 01-11-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 PIRSF PIRSF000349 1 202 6.3E-87 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 9.9E-34 T 01-11-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 4.2E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 4.2E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 4.2E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.2E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.2E-27 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 2.3E-42 T 01-11-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 SUPERFAMILY SSF54719 89 200 2.62E-48 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 Gene3D G3DSA:2.40.500.20 91 202 5.2E-51 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 Gene3D G3DSA:1.10.287.990 20 90 4.7E-31 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 01-11-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_17235 c5b68d5a4e8c6741cdac3d86221dea22 202 SUPERFAMILY SSF46609 1 91 1.57E-38 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_21370 88aea947461a6b76a01ec58f227aa321 361 SUPERFAMILY SSF56796 10 353 1.15E-60 T 01-11-2018 DOE78_21370 88aea947461a6b76a01ec58f227aa321 361 Gene3D G3DSA:3.40.50.1970 7 158 1.3E-28 T 01-11-2018 DOE78_21370 88aea947461a6b76a01ec58f227aa321 361 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 346 4.5E-49 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DOE78_21370 88aea947461a6b76a01ec58f227aa321 361 PIRSF PIRSF000112 1 358 1.7E-115 T 01-11-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 DOE78_21370 88aea947461a6b76a01ec58f227aa321 361 Gene3D G3DSA:1.20.1090.10 160 359 1.6E-60 T 01-11-2018 DOE78_17225 43cfd2596db43ef61826e1c1981ed7ee 694 SUPERFAMILY SSF56601 318 691 1.32E-63 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_17225 43cfd2596db43ef61826e1c1981ed7ee 694 Gene3D G3DSA:3.90.1310.30 64 574 4.1E-219 T 01-11-2018 DOE78_17225 43cfd2596db43ef61826e1c1981ed7ee 694 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 303 3.4E-32 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_17225 43cfd2596db43ef61826e1c1981ed7ee 694 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 682 1.3E-62 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_17225 43cfd2596db43ef61826e1c1981ed7ee 694 Gene3D G3DSA:3.40.710.10 318 671 4.1E-219 T 01-11-2018 DOE78_17225 43cfd2596db43ef61826e1c1981ed7ee 694 SUPERFAMILY SSF56519 59 318 8.5E-30 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_17225 43cfd2596db43ef61826e1c1981ed7ee 694 Gene3D G3DSA:1.10.10.1230 89 193 4.1E-219 T 01-11-2018 DOE78_10290 259664db47fcf08f919304725d186a40 201 Pfam PF01810 LysE type translocator 9 198 1.8E-44 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_10290 259664db47fcf08f919304725d186a40 201 PIRSF PIRSF006324 1 201 1.2E-53 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 176 7.0E-38 T 01-11-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 Pfam PF03454 MoeA C-terminal region (domain IV) 340 411 1.1E-14 T 01-11-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 SUPERFAMILY SSF53218 187 331 9.42E-39 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 Gene3D G3DSA:2.40.340.10 338 404 9.4E-112 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 SUPERFAMILY SSF63882 8 185 3.66E-50 T 01-11-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 Gene3D G3DSA:3.90.105.10 26 183 9.4E-112 T 01-11-2018 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 Gene3D G3DSA:3.40.980.10 184 337 9.4E-112 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 Gene3D G3DSA:2.170.190.11 50 150 9.4E-112 T 01-11-2018 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 SUPERFAMILY SSF63867 338 413 1.3E-15 T 01-11-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 Pfam PF00994 Probable molybdopterin binding domain 193 326 8.3E-26 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 188 323 4.4E-31 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_06445 865af6656ec08c3aecc707d8738b97a2 421 SMART SM00852 189 327 1.3E-37 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_20025 72fa243ddc9a3b50d5af9f3756467b98 141 Pfam PF06923 Glucitol operon activator protein (GutM) 3 101 2.2E-26 T 01-11-2018 IPR009693 Glucitol operon activator DOE78_23595 ba5c712ef793af11cb9181d0afdc546a 124 Pfam PF04892 VanZ like family 10 116 4.3E-11 T 01-11-2018 IPR006976 VanZ-like DOE78_23985 f71f2cd6f8a77700a2ffe0c78c7f9b45 125 Pfam PF09671 Spore coat protein (Spore_GerQ) 36 110 1.0E-33 T 01-11-2018 IPR014099 Spore coat protein GerQ DOE78_23985 f71f2cd6f8a77700a2ffe0c78c7f9b45 125 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 33 113 1.1E-34 T 01-11-2018 IPR014099 Spore coat protein GerQ DOE78_23985 f71f2cd6f8a77700a2ffe0c78c7f9b45 125 PIRSF PIRSF038931 6 125 4.7E-41 T 01-11-2018 IPR014099 Spore coat protein GerQ DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 SUPERFAMILY SSF55608 119 221 5.67E-20 T 01-11-2018 IPR027434 Homing endonuclease DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 Gene3D G3DSA:1.10.10.10 215 309 1.2E-36 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 18 102 1.2E-35 T 01-11-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 7.1E-37 T 01-11-2018 IPR039518 WhiA, LAGLIDADG-like domain DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.573 T 01-11-2018 IPR003802 Sporulation regulator WhiA GO:0043937 DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 2.6E-129 T 01-11-2018 IPR033981 Sporulation regulator WhiA-like DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 Gene3D G3DSA:3.10.28.10 1 214 1.8E-67 T 01-11-2018 IPR027434 Homing endonuclease DOE78_22130 e791f912a2fe5cac4ee6694e95b79b5b 317 Pfam PF02650 WhiA C-terminal HTH domain 220 304 1.1E-34 T 01-11-2018 IPR023054 Sporulation regulator WhiA, C-terminal DOE78_14475 fa23ebfc732a8bc4c3aecff2af65938b 62 Pfam PF14169 Cold-inducible protein YdjO 1 61 9.1E-18 T 01-11-2018 IPR025916 Cold-inducible protein YdjO DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 2.2E-20 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 SUPERFAMILY SSF47823 5 99 5.69E-17 T 01-11-2018 DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 Gene3D G3DSA:1.10.443.10 110 290 2.8E-70 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 296 62.695 T 01-11-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 57.939 T 01-11-2018 IPR023009 Tyrosine recombinase XerC/XerD DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 Pfam PF00589 Phage integrase family 110 282 5.7E-55 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 SUPERFAMILY SSF56349 106 294 5.3E-61 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 296 4.5E-101 T 01-11-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 Gene3D G3DSA:1.10.150.130 1 107 1.0E-19 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal DOE78_16450 6dc453a51a74a3a7ef887e8e11ab8143 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 296 4.9E-123 T 01-11-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DOE78_00140 fc793a34a3dcf76d68c7a4c351a3c602 106 Pfam PF02575 YbaB/EbfC DNA-binding family 11 101 4.8E-35 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DOE78_00140 fc793a34a3dcf76d68c7a4c351a3c602 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 105 7.6E-34 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DOE78_00140 fc793a34a3dcf76d68c7a4c351a3c602 106 Gene3D G3DSA:3.30.1310.10 1 106 8.4E-40 T 01-11-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DOE78_00140 fc793a34a3dcf76d68c7a4c351a3c602 106 SUPERFAMILY SSF82607 11 105 8.89E-35 T 01-11-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DOE78_00140 fc793a34a3dcf76d68c7a4c351a3c602 106 PIRSF PIRSF004555 3 106 2.2E-40 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DOE78_00140 fc793a34a3dcf76d68c7a4c351a3c602 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 23.118 T 01-11-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DOE78_04865 7a6a4dfd314eee7dc6ea72369b0acf41 364 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 40 102 1.0E-21 T 01-11-2018 DOE78_04865 7a6a4dfd314eee7dc6ea72369b0acf41 364 SUPERFAMILY SSF53474 129 360 1.41E-31 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_04865 7a6a4dfd314eee7dc6ea72369b0acf41 364 Gene3D G3DSA:3.40.50.1820 130 363 2.6E-68 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_04865 7a6a4dfd314eee7dc6ea72369b0acf41 364 Pfam PF00756 Putative esterase 137 289 4.1E-7 T 01-11-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DOE78_06200 4b199c5d3fe5c62f625c0b800d987be1 87 Pfam PF10803 Spore germination GerPB 1 51 5.6E-31 T 01-11-2018 IPR024255 Spore germination GerPB DOE78_06200 4b199c5d3fe5c62f625c0b800d987be1 87 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 51 3.0E-13 T 01-11-2018 IPR024255 Spore germination GerPB DOE78_12100 52db19918c681f43c895d195e956d66f 219 Gene3D G3DSA:1.10.3720.10 5 218 1.6E-46 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12100 52db19918c681f43c895d195e956d66f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 202 1.3E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12100 52db19918c681f43c895d195e956d66f 219 SUPERFAMILY SSF161098 10 203 4.58E-44 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_10125 c4b30c21f6131c595f9f27c175dae6cf 406 Pfam PF07690 Major Facilitator Superfamily 10 352 1.6E-31 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_10125 c4b30c21f6131c595f9f27c175dae6cf 406 Gene3D G3DSA:1.20.1250.20 2 186 9.9E-25 T 01-11-2018 DOE78_10125 c4b30c21f6131c595f9f27c175dae6cf 406 SUPERFAMILY SSF103473 4 386 1.83E-48 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_10125 c4b30c21f6131c595f9f27c175dae6cf 406 Gene3D G3DSA:1.20.1250.20 201 385 6.9E-33 T 01-11-2018 DOE78_13395 63b84236f698ee7db29b72d9a6ee73a4 539 SUPERFAMILY SSF161098 335 530 1.57E-23 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13395 63b84236f698ee7db29b72d9a6ee73a4 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 385 533 5.4E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_13395 63b84236f698ee7db29b72d9a6ee73a4 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 251 9.1E-12 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_13395 63b84236f698ee7db29b72d9a6ee73a4 539 Gene3D G3DSA:1.10.3720.10 327 537 4.5E-22 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13395 63b84236f698ee7db29b72d9a6ee73a4 539 Gene3D G3DSA:1.10.3720.10 57 265 4.9E-29 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13395 63b84236f698ee7db29b72d9a6ee73a4 539 SUPERFAMILY SSF161098 64 252 5.89E-29 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 Gene3D G3DSA:1.10.10.60 1 53 2.9E-20 T 01-11-2018 DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.9E-15 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 SUPERFAMILY SSF48498 86 184 4.85E-10 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 Gene3D G3DSA:1.10.357.10 54 201 2.8E-18 T 01-11-2018 DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 SUPERFAMILY SSF46689 4 77 2.51E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.9E-9 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_13145 fdf7ca9de47a53d4e2ad7fd4745355a2 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.9E-9 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_07205 466e2511b7dc8dec885dd446485843e4 154 Pfam PF14177 YkyB-like protein 14 150 4.0E-64 T 01-11-2018 IPR025552 YkyB-like protein DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 Gene3D G3DSA:3.30.390.30 340 463 1.4E-39 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 Gene3D G3DSA:3.50.50.60 154 276 1.2E-110 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 SUPERFAMILY SSF55424 338 458 3.26E-37 T 01-11-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 SUPERFAMILY SSF51905 3 333 1.02E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 01-11-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 323 2.1E-70 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PIRSF PIRSF000350 1 459 2.9E-87 T 01-11-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 Gene3D G3DSA:3.50.50.60 5 329 1.2E-110 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 2.0E-66 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 457 9.2E-164 T 01-11-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 6.7E-37 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.7E-37 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 6.7E-37 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 6.7E-37 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 6.7E-37 T 01-11-2018 DOE78_19980 7b428c2470f276dbfdc7e16097d57938 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 450 9.5E-33 T 01-11-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 Gene3D G3DSA:3.40.630.10 171 497 1.9E-127 T 01-11-2018 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 185 490 9.0E-118 T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 2.1E-52 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 2.1E-52 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 PRINTS PR00481 Cytosol aminopeptidase signature 320 341 2.1E-52 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 PRINTS PR00481 Cytosol aminopeptidase signature 342 362 2.1E-52 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 PRINTS PR00481 Cytosol aminopeptidase signature 261 278 2.1E-52 T 01-11-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 SUPERFAMILY SSF52949 3 182 3.41E-35 T 01-11-2018 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 499 35.202 T 01-11-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 346 353 - T 01-11-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 SUPERFAMILY SSF53187 181 495 1.32E-112 T 01-11-2018 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 146 1.5E-27 T 01-11-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DOE78_20940 67c3fe47f81f7fca97c521082aaad691 501 Gene3D G3DSA:3.40.220.10 6 158 1.2E-37 T 01-11-2018 DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 Pfam PF00176 SNF2 family N-terminal domain 79 318 2.5E-34 T 01-11-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 Gene3D G3DSA:3.40.50.10810 57 299 3.1E-58 T 01-11-2018 IPR038718 SNF2-like, N-terminal domain superfamily DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 SMART SM00490 386 466 2.1E-19 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 SMART SM00487 56 234 4.2E-29 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 Pfam PF00271 Helicase conserved C-terminal domain 364 466 3.5E-21 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 SUPERFAMILY SSF52540 16 258 3.33E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 SUPERFAMILY SSF52540 168 519 5.15E-56 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17025 3ff23cd04eca19c96ceec3fda7098e89 562 Gene3D G3DSA:3.40.50.300 305 498 1.8E-46 T 01-11-2018 DOE78_15080 33e19c1894c03d811db616a29c85b1bf 213 Gene3D G3DSA:2.40.33.20 1 213 2.5E-62 T 01-11-2018 DOE78_15080 33e19c1894c03d811db616a29c85b1bf 213 SUPERFAMILY SSF50800 1 211 2.25E-58 T 01-11-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DOE78_15080 33e19c1894c03d811db616a29c85b1bf 213 Pfam PF03475 3-alpha domain 169 211 5.3E-10 T 01-11-2018 IPR005163 3-alpha domain DOE78_15080 33e19c1894c03d811db616a29c85b1bf 213 Pfam PF03473 MOSC domain 50 154 2.6E-17 T 01-11-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DOE78_15270 10f3390da190417f7d152724c4350003 502 SUPERFAMILY SSF109604 312 491 5.69E-42 T 01-11-2018 DOE78_15270 10f3390da190417f7d152724c4350003 502 SMART SM00471 323 461 1.8E-14 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_15270 10f3390da190417f7d152724c4350003 502 Pfam PF01966 HD domain 329 452 6.5E-21 T 01-11-2018 IPR006674 HD domain DOE78_15270 10f3390da190417f7d152724c4350003 502 Gene3D G3DSA:1.10.3210.10 301 499 4.1E-72 T 01-11-2018 DOE78_01350 5128ba335a35a48ec8f63989b444d5a6 118 Pfam PF01740 STAS domain 10 94 2.5E-12 T 01-11-2018 IPR002645 STAS domain DOE78_01350 5128ba335a35a48ec8f63989b444d5a6 118 Gene3D G3DSA:3.30.750.24 1 116 4.4E-32 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_01350 5128ba335a35a48ec8f63989b444d5a6 118 SUPERFAMILY SSF52091 2 112 5.1E-19 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_16160 e024694f3e7e66de33c18d4f5867bfc5 349 Gene3D G3DSA:3.20.20.70 2 349 2.3E-122 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_16160 e024694f3e7e66de33c18d4f5867bfc5 349 SUPERFAMILY SSF51395 23 348 7.85E-82 T 01-11-2018 DOE78_16160 e024694f3e7e66de33c18d4f5867bfc5 349 Pfam PF01070 FMN-dependent dehydrogenase 169 324 3.8E-15 T 01-11-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 DOE78_16160 e024694f3e7e66de33c18d4f5867bfc5 349 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 37.217 T 01-11-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DOE78_16160 e024694f3e7e66de33c18d4f5867bfc5 349 SMART SM01240 21 333 7.1E-4 T 01-11-2018 DOE78_16160 e024694f3e7e66de33c18d4f5867bfc5 349 PIRSF PIRSF003314 1 340 4.2E-119 T 01-11-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DOE78_16160 e024694f3e7e66de33c18d4f5867bfc5 349 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 8.4E-117 T 01-11-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 Pfam PF00482 Type II secretion system (T2SS), protein F 274 395 1.3E-26 T 01-11-2018 IPR018076 Type II secretion system F domain DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 3.1E-33 T 01-11-2018 IPR018076 Type II secretion system F domain DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 01-11-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 Gene3D G3DSA:1.20.81.30 58 172 9.1E-33 T 01-11-2018 DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 2.9E-19 T 01-11-2018 IPR003004 GspF/PilC family DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 2.9E-19 T 01-11-2018 IPR003004 GspF/PilC family DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 2.9E-19 T 01-11-2018 IPR003004 GspF/PilC family DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 2.9E-19 T 01-11-2018 IPR003004 GspF/PilC family DOE78_24235 3cc0ab3cae579e251496f42d70c74031 404 Gene3D G3DSA:1.20.81.30 256 368 3.4E-27 T 01-11-2018 DOE78_04860 21d92c9bf5fdf6f3a53900434c993f0f 244 SUPERFAMILY SSF88713 5 237 1.41E-78 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_04860 21d92c9bf5fdf6f3a53900434c993f0f 244 Gene3D G3DSA:3.20.20.370 4 243 4.3E-86 T 01-11-2018 DOE78_04860 21d92c9bf5fdf6f3a53900434c993f0f 244 Pfam PF03746 LamB/YcsF family 5 229 3.1E-81 T 01-11-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DOE78_13025 1fed0c2a0005ddebb4b39ba061820a17 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 246 9.3E-27 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_13025 1fed0c2a0005ddebb4b39ba061820a17 255 SUPERFAMILY SSF161098 50 231 3.79E-29 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13025 1fed0c2a0005ddebb4b39ba061820a17 255 Gene3D G3DSA:1.10.3720.10 46 241 6.4E-21 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 01-11-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 Gene3D G3DSA:1.10.10.10 7 141 1.2E-30 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 SMART SM00347 25 125 3.8E-23 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 Pfam PF01047 MarR family 32 89 1.1E-14 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 8.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 8.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 8.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 8.3E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_11755 d2d3b97bb43a64421f81539fa21c7067 163 SUPERFAMILY SSF46785 26 143 2.8E-29 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 6.6E-58 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 2.8E-37 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 2.8E-37 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 2.8E-37 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 2.8E-37 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 ProSitePatterns PS01218 TatC family signature. 147 166 - T 01-11-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 232 14.811 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_10655 2f6abc319f75a964e7a349b63f728b5c 244 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 6.9E-55 T 01-11-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DOE78_15510 251ac0893c038458615ad264be5d7413 280 Gene3D G3DSA:3.30.1180.10 153 278 2.8E-36 T 01-11-2018 DOE78_15510 251ac0893c038458615ad264be5d7413 280 Gene3D G3DSA:3.40.50.10170 1 152 4.2E-54 T 01-11-2018 DOE78_15510 251ac0893c038458615ad264be5d7413 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 279 3.5E-93 T 01-11-2018 IPR003797 DegV DOE78_15510 251ac0893c038458615ad264be5d7413 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 7.2E-100 T 01-11-2018 IPR003797 DegV DOE78_15510 251ac0893c038458615ad264be5d7413 280 SUPERFAMILY SSF82549 2 279 2.88E-90 T 01-11-2018 DOE78_01320 e57ce052a665aae72ffd14ba1b556964 118 Gene3D G3DSA:3.90.470.20 1 118 2.3E-37 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DOE78_01320 e57ce052a665aae72ffd14ba1b556964 118 SUPERFAMILY SSF56214 2 115 9.94E-32 T 01-11-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DOE78_01320 e57ce052a665aae72ffd14ba1b556964 118 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 116 1.2E-37 T 01-11-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DOE78_01320 e57ce052a665aae72ffd14ba1b556964 118 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 111 1.3E-22 T 01-11-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DOE78_01320 e57ce052a665aae72ffd14ba1b556964 118 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 116 2.3E-31 T 01-11-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DOE78_01320 e57ce052a665aae72ffd14ba1b556964 118 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 24.792 T 01-11-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DOE78_01320 e57ce052a665aae72ffd14ba1b556964 118 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 116 4.0E-31 T 01-11-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 257 3.3E-59 T 01-11-2018 DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 Gene3D G3DSA:3.40.50.720 2 260 1.6E-77 T 01-11-2018 DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.8E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.8E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.8E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.8E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 2.8E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.8E-40 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 SUPERFAMILY SSF51735 16 257 8.35E-76 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.8E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.8E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_11655 acb36f00c3ca95e0a4e8630916fa7776 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.8E-12 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_20690 0a2f5d5638e454aa6539f5fb6f0f5ddf 283 Gene3D G3DSA:1.10.357.10 1 193 4.2E-30 T 01-11-2018 DOE78_20690 0a2f5d5638e454aa6539f5fb6f0f5ddf 283 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.9E-17 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_20690 0a2f5d5638e454aa6539f5fb6f0f5ddf 283 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE78_20690 0a2f5d5638e454aa6539f5fb6f0f5ddf 283 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 7.0E-11 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_20690 0a2f5d5638e454aa6539f5fb6f0f5ddf 283 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 7.0E-11 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_20690 0a2f5d5638e454aa6539f5fb6f0f5ddf 283 SUPERFAMILY SSF46689 3 80 8.74E-19 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04275 a525bcae3cace471b76590ed357be5dd 392 Gene3D G3DSA:1.20.1250.20 1 184 8.8E-25 T 01-11-2018 DOE78_04275 a525bcae3cace471b76590ed357be5dd 392 SUPERFAMILY SSF103473 4 386 1.44E-56 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_04275 a525bcae3cace471b76590ed357be5dd 392 Gene3D G3DSA:1.20.1250.20 204 387 1.2E-22 T 01-11-2018 DOE78_04275 a525bcae3cace471b76590ed357be5dd 392 Pfam PF07690 Major Facilitator Superfamily 8 253 3.3E-26 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 36.331 T 01-11-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 PIRSF PIRSF015592 1 202 5.7E-70 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 Pfam PF01470 Pyroglutamyl peptidase 2 199 6.6E-62 T 01-11-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 SUPERFAMILY SSF53182 1 200 1.57E-60 T 01-11-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 Gene3D G3DSA:3.40.630.20 1 202 2.1E-67 T 01-11-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 01-11-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.6E-26 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 131 147 2.6E-26 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 2.6E-26 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.6E-26 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DOE78_23580 cfaa1a4bb1d205f866e3cf37fd4937c4 202 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.6E-26 T 01-11-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 Gene3D G3DSA:3.30.450.40 56 178 2.7E-45 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 SMART SM00966 8 52 1.1E-10 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 5.9E-45 T 01-11-2018 IPR039472 Sporulation stage V protein T, GAF domain DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 PIRSF PIRSF026579 1 178 2.1E-94 T 01-11-2018 IPR014213 Sporulation stage V, protein T DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 01-11-2018 DOE78_00335 4d0fe63e8fd86ce182c8e38082678b54 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 2.5E-89 T 01-11-2018 IPR014213 Sporulation stage V, protein T DOE78_00350 730b078a039a040d9db769595973ae6c 89 SUPERFAMILY SSF55174 1 76 1.19E-20 T 01-11-2018 DOE78_00350 730b078a039a040d9db769595973ae6c 89 SMART SM00363 1 64 3.1E-9 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00350 730b078a039a040d9db769595973ae6c 89 PIRSF PIRSF038881 1 89 1.1E-33 T 01-11-2018 IPR025490 RNA-binding protein, HP1423 type DOE78_00350 730b078a039a040d9db769595973ae6c 89 Pfam PF01479 S4 domain 1 47 6.3E-10 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00350 730b078a039a040d9db769595973ae6c 89 Gene3D G3DSA:3.10.290.10 1 89 7.1E-25 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 Gene3D G3DSA:3.10.310.10 125 277 2.3E-70 T 01-11-2018 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 280 1.6E-59 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 SUPERFAMILY SSF54506 154 285 9.42E-27 T 01-11-2018 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 01-11-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 287 30.267 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 Pfam PF01678 Diaminopimelate epimerase 6 109 2.3E-25 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 Pfam PF01678 Diaminopimelate epimerase 158 270 1.1E-12 T 01-11-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 SUPERFAMILY SSF54506 4 136 5.69E-30 T 01-11-2018 DOE78_15210 cb8ca06e6436d072e00aba983fb09697 324 Gene3D G3DSA:3.10.310.10 6 279 2.3E-70 T 01-11-2018 DOE78_22805 44a76418eaf6c5a907322a77d52c5773 189 Pfam PF02417 Chromate transporter 5 169 6.9E-38 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DOE78_12480 d6320aef6026875dba088f92ab78fd80 303 Pfam PF13614 AAA domain 1 205 5.2E-45 T 01-11-2018 IPR025669 AAA domain DOE78_12480 d6320aef6026875dba088f92ab78fd80 303 SUPERFAMILY SSF52540 2 297 6.21E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12480 d6320aef6026875dba088f92ab78fd80 303 Gene3D G3DSA:3.40.50.300 1 302 1.3E-66 T 01-11-2018 DOE78_15870 55e64a735b4dcbfd027d8e745bf0ba71 118 SUPERFAMILY SSF140415 4 115 1.07E-38 T 01-11-2018 IPR023351 YppE-like superfamily DOE78_15870 55e64a735b4dcbfd027d8e745bf0ba71 118 Gene3D G3DSA:1.20.120.440 1 118 7.6E-42 T 01-11-2018 IPR023351 YppE-like superfamily DOE78_15870 55e64a735b4dcbfd027d8e745bf0ba71 118 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 7 112 1.7E-36 T 01-11-2018 IPR014913 Protein of unknown function DUF1798 DOE78_12335 b9e3f09d1497d2aa7d3f14dc445a1d87 146 Gene3D G3DSA:3.30.530.20 2 146 2.6E-12 T 01-11-2018 IPR023393 START-like domain superfamily DOE78_12335 b9e3f09d1497d2aa7d3f14dc445a1d87 146 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 3 143 1.9E-7 T 01-11-2018 IPR019587 Polyketide cyclase/dehydrase DOE78_12335 b9e3f09d1497d2aa7d3f14dc445a1d87 146 SUPERFAMILY SSF55961 4 146 1.19E-16 T 01-11-2018 DOE78_08780 f1007c358aebcac84fb42ba1125aeaf1 155 PRINTS PR00502 NUDIX hydrolase family signature 41 55 1.8E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_08780 f1007c358aebcac84fb42ba1125aeaf1 155 PRINTS PR00502 NUDIX hydrolase family signature 55 70 1.8E-8 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_08780 f1007c358aebcac84fb42ba1125aeaf1 155 Pfam PF00293 NUDIX domain 20 133 4.7E-18 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_08780 f1007c358aebcac84fb42ba1125aeaf1 155 SUPERFAMILY SSF55811 14 133 1.62E-26 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_08780 f1007c358aebcac84fb42ba1125aeaf1 155 Gene3D G3DSA:3.90.79.10 1 141 3.3E-32 T 01-11-2018 DOE78_08780 f1007c358aebcac84fb42ba1125aeaf1 155 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_02915 499429ad5328803acd42fc1256bb7adc 106 Pfam PF00699 Urease beta subunit 3 99 1.8E-44 T 01-11-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02915 499429ad5328803acd42fc1256bb7adc 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.658 T 01-11-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02915 499429ad5328803acd42fc1256bb7adc 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 6.0E-45 T 01-11-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02915 499429ad5328803acd42fc1256bb7adc 106 Gene3D G3DSA:2.10.150.10 1 106 1.2E-48 T 01-11-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02915 499429ad5328803acd42fc1256bb7adc 106 SUPERFAMILY SSF51278 1 103 1.02E-46 T 01-11-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_17510 f7fa21f3ec2ee211203f8c3cead86f7d 109 ProDom PD072942 YQXA ORF79 7 108 3.0E-21 T 01-11-2018 IPR020534 Uncharacterised protein family YqxA DOE78_17510 f7fa21f3ec2ee211203f8c3cead86f7d 109 Pfam PF12438 Protein of unknown function (DUF3679) 7 61 1.5E-20 T 01-11-2018 IPR020534 Uncharacterised protein family YqxA DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 Pfam PF07650 KH domain 211 289 1.1E-23 T 01-11-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 283 5.6E-110 T 01-11-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 Gene3D G3DSA:3.40.50.300 6 188 4.3E-49 T 01-11-2018 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 172 1.1E-28 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 Hamap MF_00367 GTPase Era [era]. 9 300 39.524 T 01-11-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 SUPERFAMILY SSF52540 14 209 8.82E-50 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 SUPERFAMILY SSF54814 185 301 3.07E-44 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 90 105 2.0E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 14 34 2.0E-5 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 Gene3D G3DSA:3.30.300.20 189 302 3.2E-45 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_17390 6545b2b1d1e9967bfe27453d7f9621a5 305 Pfam PF01926 50S ribosome-binding GTPase 14 128 8.0E-24 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_05265 9adf767727f41ec6eb1a5782c86aece1 291 Gene3D G3DSA:1.20.120.330 116 232 3.7E-48 T 01-11-2018 DOE78_05265 9adf767727f41ec6eb1a5782c86aece1 291 Gene3D G3DSA:1.10.10.10 233 286 2.5E-5 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_05265 9adf767727f41ec6eb1a5782c86aece1 291 Gene3D G3DSA:3.30.460.10 1 114 5.8E-44 T 01-11-2018 DOE78_05265 9adf767727f41ec6eb1a5782c86aece1 291 ProDom PD128250 YGXA BH0953 1 279 1.0E-99 T 01-11-2018 DOE78_05265 9adf767727f41ec6eb1a5782c86aece1 291 Pfam PF14540 Nucleotidyltransferase-like 1 118 5.2E-48 T 01-11-2018 IPR029348 Nucleotidyltransferase-like domain DOE78_07385 79eb1aef60fb60316744162f3ac6f945 89 SUPERFAMILY SSF158504 4 87 3.66E-34 T 01-11-2018 IPR023324 BH2638-like superfamily DOE78_07385 79eb1aef60fb60316744162f3ac6f945 89 Hamap MF_01041 UPF0223 protein . 1 88 25.293 T 01-11-2018 IPR007920 Protein of unknown function UPF0223 DOE78_07385 79eb1aef60fb60316744162f3ac6f945 89 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 88 9.0E-27 T 01-11-2018 IPR007920 Protein of unknown function UPF0223 DOE78_07385 79eb1aef60fb60316744162f3ac6f945 89 PIRSF PIRSF037260 1 89 3.1E-38 T 01-11-2018 IPR007920 Protein of unknown function UPF0223 DOE78_07385 79eb1aef60fb60316744162f3ac6f945 89 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 86 1.7E-38 T 01-11-2018 IPR007920 Protein of unknown function UPF0223 DOE78_07385 79eb1aef60fb60316744162f3ac6f945 89 Gene3D G3DSA:1.10.220.80 12 89 8.1E-31 T 01-11-2018 IPR023324 BH2638-like superfamily DOE78_10115 68021b3d3df9da1eed2356e056292ab8 25 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 2 23 1.3E-13 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_10115 68021b3d3df9da1eed2356e056292ab8 25 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 2 23 2.4E-14 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_12445 1789f60fe74216cc4a12c322943c10b2 145 Pfam PF00583 Acetyltransferase (GNAT) family 35 134 1.7E-15 T 01-11-2018 IPR000182 GNAT domain DOE78_12445 1789f60fe74216cc4a12c322943c10b2 145 SUPERFAMILY SSF55729 1 142 8.75E-23 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_12445 1789f60fe74216cc4a12c322943c10b2 145 Gene3D G3DSA:3.40.630.30 3 145 7.5E-22 T 01-11-2018 DOE78_15765 013ba821d5443db41786b1fdcf97630b 187 Gene3D G3DSA:1.20.120.1630 1 181 1.6E-19 T 01-11-2018 DOE78_15765 013ba821d5443db41786b1fdcf97630b 187 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 73 162 6.4E-26 T 01-11-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 DOE78_06225 716045ae486dddfbcca15be25aa07305 122 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 5 122 3.0E-20 T 01-11-2018 IPR010899 Protein of unknown function UPF0344 DOE78_06225 716045ae486dddfbcca15be25aa07305 122 Pfam PF07457 Protein of unknown function (DUF1516) 5 112 3.0E-36 T 01-11-2018 IPR010899 Protein of unknown function UPF0344 DOE78_06225 716045ae486dddfbcca15be25aa07305 122 Hamap MF_01536 UPF0344 protein . 4 122 15.973 T 01-11-2018 IPR010899 Protein of unknown function UPF0344 DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 Gene3D G3DSA:3.90.1640.10 322 540 4.9E-54 T 01-11-2018 DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 Pfam PF01368 DHH family 339 496 3.0E-22 T 01-11-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 Gene3D G3DSA:3.30.450.20 52 161 8.1E-36 T 01-11-2018 DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 SMART SM00267 140 299 3.3E-5 T 01-11-2018 IPR000160 GGDEF domain DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 Gene3D G3DSA:3.10.310.30 563 656 5.0E-10 T 01-11-2018 DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 SUPERFAMILY SSF64182 338 641 4.06E-70 T 01-11-2018 IPR038763 DHH phosphoesterase superfamily DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 PIRSF PIRSF026583 1 657 1.3E-272 T 01-11-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA DOE78_24615 04fb35600c029bb3bcc29ee2e553eeb7 657 Pfam PF02272 DHHA1 domain 520 647 1.1E-12 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DOE78_07585 79f48ea7f1440d8459c8e10a6862ebb8 187 PIRSF PIRSF004553 1 184 2.2E-51 T 01-11-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DOE78_07585 79f48ea7f1440d8459c8e10a6862ebb8 187 SUPERFAMILY SSF53335 1 180 2.31E-51 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_07585 79f48ea7f1440d8459c8e10a6862ebb8 187 Pfam PF03602 Conserved hypothetical protein 95 1 180 7.0E-60 T 01-11-2018 DOE78_07585 79f48ea7f1440d8459c8e10a6862ebb8 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 180 4.7E-57 T 01-11-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DOE78_07585 79f48ea7f1440d8459c8e10a6862ebb8 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 01-11-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DOE78_07585 79f48ea7f1440d8459c8e10a6862ebb8 187 Gene3D G3DSA:3.40.50.150 1 182 2.1E-58 T 01-11-2018 DOE78_23910 02d353bdea858239fafd5a82ff268278 147 Gene3D G3DSA:2.40.128.20 1 147 4.7E-46 T 01-11-2018 IPR012674 Calycin DOE78_23910 02d353bdea858239fafd5a82ff268278 147 Pfam PF09148 Domain of unknown function (DUF1934) 13 140 5.7E-34 T 01-11-2018 IPR015231 Protein of unknown function DUF1934 DOE78_23910 02d353bdea858239fafd5a82ff268278 147 SUPERFAMILY SSF50814 7 144 5.5E-33 T 01-11-2018 IPR012674 Calycin DOE78_11820 a596f327de2644f3249a9d0dbe6a04e0 417 Pfam PF03594 Benzoate membrane transport protein 17 392 1.9E-83 T 01-11-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 DOE78_11820 a596f327de2644f3249a9d0dbe6a04e0 417 TIGRFAM TIGR00843 benE: benzoate transporter 20 393 7.7E-69 T 01-11-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 DOE78_01365 ff3b667d87b28d3de0d5937e4a457b10 109 Pfam PF01740 STAS domain 5 101 2.6E-17 T 01-11-2018 IPR002645 STAS domain DOE78_01365 ff3b667d87b28d3de0d5937e4a457b10 109 Gene3D G3DSA:3.30.750.24 2 107 6.2E-27 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_01365 ff3b667d87b28d3de0d5937e4a457b10 109 SUPERFAMILY SSF52091 4 101 2.16E-25 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_01365 ff3b667d87b28d3de0d5937e4a457b10 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 103 2.8E-33 T 01-11-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 DOE78_20275 72f17e1ca2002eb0f3cb3dd8f1e158e8 167 SUPERFAMILY SSF54292 13 90 4.98E-22 T 01-11-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DOE78_20275 72f17e1ca2002eb0f3cb3dd8f1e158e8 167 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 18 66 3.8E-7 T 01-11-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DOE78_20275 72f17e1ca2002eb0f3cb3dd8f1e158e8 167 SUPERFAMILY SSF47741 85 161 4.45E-32 T 01-11-2018 IPR036884 [2Fe-2S]-binding domain superfamily DOE78_20275 72f17e1ca2002eb0f3cb3dd8f1e158e8 167 Gene3D G3DSA:1.10.150.120 91 167 8.5E-32 T 01-11-2018 DOE78_20275 72f17e1ca2002eb0f3cb3dd8f1e158e8 167 Gene3D G3DSA:3.10.20.30 5 90 1.9E-27 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_20275 72f17e1ca2002eb0f3cb3dd8f1e158e8 167 Pfam PF01799 [2Fe-2S] binding domain 85 156 3.1E-31 T 01-11-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DOE78_20275 72f17e1ca2002eb0f3cb3dd8f1e158e8 167 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 01-11-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 SMART SM00984 310 412 2.2E-42 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 3.7E-64 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 Gene3D G3DSA:1.20.5.100 194 224 7.0E-18 T 01-11-2018 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 SUPERFAMILY SSF51735 1 184 4.88E-50 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 Gene3D G3DSA:3.40.50.720 226 436 2.3E-71 T 01-11-2018 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 Gene3D G3DSA:3.40.50.720 1 193 4.5E-72 T 01-11-2018 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 310 411 8.9E-29 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 PIRSF PIRSF000124 1 427 2.7E-146 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 PIRSF PIRSF500134 1 430 1.0E-174 T 01-11-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 195 287 6.5E-37 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 SUPERFAMILY SSF52413 297 422 2.22E-34 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 408 1.9E-139 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_24110 ffce48c6b5ae2d9e12a342f6103275fa 439 SUPERFAMILY SSF48179 194 292 1.7E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_00630 2b60da15d5747490f839fce5663861f2 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 58 6.6E-23 T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00630 2b60da15d5747490f839fce5663861f2 59 Gene3D G3DSA:1.20.5.1030 1 58 8.9E-21 T 01-11-2018 IPR038379 SecE superfamily DOE78_00630 2b60da15d5747490f839fce5663861f2 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00630 2b60da15d5747490f839fce5663861f2 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 13.826 T 01-11-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DOE78_00630 2b60da15d5747490f839fce5663861f2 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 58 4.1E-24 T 01-11-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DOE78_20625 edb8f636ea2dd529a39a4c9003e4131d 317 Pfam PF01545 Cation efflux family 36 229 1.6E-51 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_20625 edb8f636ea2dd529a39a4c9003e4131d 317 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 308 2.1E-91 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_20625 edb8f636ea2dd529a39a4c9003e4131d 317 SUPERFAMILY SSF161111 31 230 5.1E-60 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_20625 edb8f636ea2dd529a39a4c9003e4131d 317 Gene3D G3DSA:1.20.1510.10 33 229 1.9E-46 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_20625 edb8f636ea2dd529a39a4c9003e4131d 317 SUPERFAMILY SSF160240 233 306 3.53E-8 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DOE78_22060 64fa348b3882e6ee19526d6b30651c71 327 Pfam PF08378 Nuclease-related domain 41 154 2.6E-19 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_23120 8d2e4e419de736e1af8ab1cd00f217c4 208 Pfam PF02397 Bacterial sugar transferase 8 186 8.6E-61 T 01-11-2018 IPR003362 Bacterial sugar transferase DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 Gene3D G3DSA:3.90.180.10 18 326 2.2E-101 T 01-11-2018 DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 SUPERFAMILY SSF51735 135 305 4.29E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 Pfam PF00107 Zinc-binding dehydrogenase 173 300 2.0E-27 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 125 8.8E-30 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 SMART SM00829 10 339 1.8E-6 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 Gene3D G3DSA:3.40.50.720 157 284 2.2E-101 T 01-11-2018 DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 56 70 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_19955 128db3d2608c617b5517528c65ae63a1 341 SUPERFAMILY SSF50129 1 171 3.2E-47 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_20880 12f56c885e6988431897e825e4cb07bf 118 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 107 8.4E-32 T 01-11-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DOE78_20880 12f56c885e6988431897e825e4cb07bf 118 Pfam PF03334 Na+/H+ antiporter subunit 12 93 1.8E-27 T 01-11-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 512 1.2E-41 T 01-11-2018 IPR000160 GGDEF domain DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 Gene3D G3DSA:3.30.450.20 81 177 1.1E-13 T 01-11-2018 DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 Pfam PF02743 Cache domain 47 266 1.7E-23 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 SUPERFAMILY SSF55073 368 513 2.59E-42 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 Gene3D G3DSA:3.30.70.270 358 516 4.8E-46 T 01-11-2018 DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 SMART SM00267 352 513 3.1E-51 T 01-11-2018 IPR000160 GGDEF domain DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 SUPERFAMILY SSF103190 199 265 5.1E-8 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 509 2.1E-36 T 01-11-2018 IPR000160 GGDEF domain DOE78_09900 56ecfe46ca8b98adc59e42dd686da4f5 517 SUPERFAMILY SSF103190 79 180 3.92E-5 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_14210 50db4620a4a76e954be573101e21bab8 447 Gene3D G3DSA:3.30.450.20 154 283 3.8E-31 T 01-11-2018 DOE78_14210 50db4620a4a76e954be573101e21bab8 447 Gene3D G3DSA:3.30.70.270 284 446 5.1E-49 T 01-11-2018 DOE78_14210 50db4620a4a76e954be573101e21bab8 447 SMART SM00091 154 220 1.3E-13 T 01-11-2018 IPR000014 PAS domain DOE78_14210 50db4620a4a76e954be573101e21bab8 447 SMART SM00091 28 92 19.0 T 01-11-2018 IPR000014 PAS domain DOE78_14210 50db4620a4a76e954be573101e21bab8 447 Gene3D G3DSA:3.30.450.20 17 153 2.6E-13 T 01-11-2018 DOE78_14210 50db4620a4a76e954be573101e21bab8 447 Pfam PF08448 PAS fold 37 143 9.8E-7 T 01-11-2018 IPR013656 PAS fold-4 DOE78_14210 50db4620a4a76e954be573101e21bab8 447 SUPERFAMILY SSF55073 285 443 7.85E-43 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_14210 50db4620a4a76e954be573101e21bab8 447 Pfam PF00990 Diguanylate cyclase, GGDEF domain 280 436 3.9E-41 T 01-11-2018 IPR000160 GGDEF domain DOE78_14210 50db4620a4a76e954be573101e21bab8 447 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 273 3.3E-28 T 01-11-2018 IPR000014 PAS domain DOE78_14210 50db4620a4a76e954be573101e21bab8 447 Pfam PF08447 PAS fold 177 260 1.0E-16 T 01-11-2018 IPR013655 PAS fold-3 GO:0005515 DOE78_14210 50db4620a4a76e954be573101e21bab8 447 SUPERFAMILY SSF55785 139 267 1.57E-31 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_14210 50db4620a4a76e954be573101e21bab8 447 SMART SM00086 227 269 3.3E-4 T 01-11-2018 IPR001610 PAC motif DOE78_14210 50db4620a4a76e954be573101e21bab8 447 SMART SM00267 269 441 8.8E-46 T 01-11-2018 IPR000160 GGDEF domain DOE78_14210 50db4620a4a76e954be573101e21bab8 447 SUPERFAMILY SSF55785 39 151 2.44E-6 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_14210 50db4620a4a76e954be573101e21bab8 447 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 440 7.4E-42 T 01-11-2018 IPR000160 GGDEF domain DOE78_04105 aff831a71da73d0b4a783f15101fdcfe 162 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 52 153 1.7E-16 T 01-11-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DOE78_08825 7559aa949c31aebff407fca0bf33cbf4 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 280 3.2E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_08825 7559aa949c31aebff407fca0bf33cbf4 291 Gene3D G3DSA:1.10.3720.10 49 290 6.1E-66 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08825 7559aa949c31aebff407fca0bf33cbf4 291 SUPERFAMILY SSF161098 53 279 2.49E-59 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09375 12edcc5c19b3697fd7fab377ae2bbaea 211 Gene3D G3DSA:3.40.30.10 43 207 1.0E-37 T 01-11-2018 DOE78_09375 12edcc5c19b3697fd7fab377ae2bbaea 211 SUPERFAMILY SSF52833 48 202 1.45E-32 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_09375 12edcc5c19b3697fd7fab377ae2bbaea 211 Pfam PF02630 SCO1/SenC 33 185 1.2E-16 T 01-11-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 11 176 5.0E-57 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 Pfam PF00717 Peptidase S24-like 35 102 1.4E-22 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 SUPERFAMILY SSF51306 26 181 3.66E-54 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 ProSitePatterns PS00760 Signal peptidases I lysine active site. 80 92 - T 01-11-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 ProSitePatterns PS00761 Signal peptidases I signature 3. 141 154 - T 01-11-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 01-11-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 Gene3D G3DSA:2.10.109.10 58 183 1.3E-45 T 01-11-2018 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 2.2E-21 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 2.2E-21 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_08080 bb82d6b73419a1f892956c9e26030066 183 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 78 90 2.2E-21 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_03910 55e54ae30f341c9b45d3a0c09f13fbe6 234 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 57 206 6.6E-9 T 01-11-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DOE78_03910 55e54ae30f341c9b45d3a0c09f13fbe6 234 SUPERFAMILY SSF55846 48 215 6.54E-27 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DOE78_03910 55e54ae30f341c9b45d3a0c09f13fbe6 234 Gene3D G3DSA:3.40.80.10 36 218 3.8E-19 T 01-11-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DOE78_10370 72645bce4345f91828d091e10f88076a 312 Gene3D G3DSA:3.10.180.10 7 302 3.8E-122 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10370 72645bce4345f91828d091e10f88076a 312 Gene3D G3DSA:3.10.180.10 67 210 3.8E-122 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10370 72645bce4345f91828d091e10f88076a 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 266 3.5E-34 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_10370 72645bce4345f91828d091e10f88076a 312 SUPERFAMILY SSF54593 6 283 2.17E-47 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_04400 238a48705d11276d7f703eb48fc4a359 457 Pfam PF01554 MatE 246 407 1.1E-27 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_04400 238a48705d11276d7f703eb48fc4a359 457 Pfam PF01554 MatE 21 180 1.7E-33 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_04400 238a48705d11276d7f703eb48fc4a359 457 PIRSF PIRSF006603 3 455 1.1E-90 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_04400 238a48705d11276d7f703eb48fc4a359 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 420 1.2E-69 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_03380 60edf83fed15f64181e5927ddd0822e5 56 Pfam PF00578 AhpC/TSA family 16 56 4.1E-9 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_03380 60edf83fed15f64181e5927ddd0822e5 56 SUPERFAMILY SSF52833 15 56 9.3E-12 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_03380 60edf83fed15f64181e5927ddd0822e5 56 Gene3D G3DSA:3.40.30.10 7 56 7.5E-14 T 01-11-2018 DOE78_06620 7981bd0d871516211060f24aa8b51ead 309 SMART SM00382 37 231 4.9E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_06620 7981bd0d871516211060f24aa8b51ead 309 Gene3D G3DSA:3.40.50.300 5 308 1.3E-90 T 01-11-2018 DOE78_06620 7981bd0d871516211060f24aa8b51ead 309 SUPERFAMILY SSF52540 7 253 1.65E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06620 7981bd0d871516211060f24aa8b51ead 309 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 279 1.4E-7 T 01-11-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DOE78_06620 7981bd0d871516211060f24aa8b51ead 309 Pfam PF00005 ABC transporter 29 181 3.5E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06620 7981bd0d871516211060f24aa8b51ead 309 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_24630 e3a85cc662e946e34de92c2621c4f6d0 173 SUPERFAMILY SSF50249 1 173 3.14E-59 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_24630 e3a85cc662e946e34de92c2621c4f6d0 173 Pfam PF00436 Single-strand binding protein family 2 103 9.3E-37 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DOE78_24630 e3a85cc662e946e34de92c2621c4f6d0 173 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 173 2.1E-48 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DOE78_24630 e3a85cc662e946e34de92c2621c4f6d0 173 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.518 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DOE78_24630 e3a85cc662e946e34de92c2621c4f6d0 173 PIRSF PIRSF002070 1 160 4.0E-40 T 01-11-2018 DOE78_24630 e3a85cc662e946e34de92c2621c4f6d0 173 Gene3D G3DSA:2.40.50.140 1 110 3.3E-45 T 01-11-2018 DOE78_22360 6567358ec64acdb3484bdf7d0fdfb786 102 SUPERFAMILY SSF46785 4 101 1.17E-29 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_22360 6567358ec64acdb3484bdf7d0fdfb786 102 Gene3D G3DSA:1.10.10.10 1 102 4.4E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22360 6567358ec64acdb3484bdf7d0fdfb786 102 Pfam PF01638 HxlR-like helix-turn-helix 15 101 3.3E-28 T 01-11-2018 IPR002577 Helix-turn-helix, HxlR type DOE78_17065 7a4b504ea1e66a9f297c1a530fc215d1 343 Gene3D G3DSA:1.20.81.30 3 110 8.3E-7 T 01-11-2018 DOE78_17065 7a4b504ea1e66a9f297c1a530fc215d1 343 Gene3D G3DSA:1.20.81.30 196 307 2.4E-9 T 01-11-2018 DOE78_17065 7a4b504ea1e66a9f297c1a530fc215d1 343 Pfam PF00482 Type II secretion system (T2SS), protein F 15 128 3.1E-10 T 01-11-2018 IPR018076 Type II secretion system F domain DOE78_17065 7a4b504ea1e66a9f297c1a530fc215d1 343 Pfam PF00482 Type II secretion system (T2SS), protein F 214 335 3.2E-13 T 01-11-2018 IPR018076 Type II secretion system F domain DOE78_08810 50df72d85d500415dfc0e8524e61d327 432 Gene3D G3DSA:3.40.190.10 148 409 1.8E-81 T 01-11-2018 DOE78_08810 50df72d85d500415dfc0e8524e61d327 432 SUPERFAMILY SSF53850 19 427 4.53E-66 T 01-11-2018 DOE78_08810 50df72d85d500415dfc0e8524e61d327 432 Pfam PF13416 Bacterial extracellular solute-binding protein 57 359 1.6E-40 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_08810 50df72d85d500415dfc0e8524e61d327 432 Gene3D G3DSA:3.40.190.10 53 367 1.8E-81 T 01-11-2018 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 SUPERFAMILY SSF51445 7 476 3.53E-174 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 Gene3D G3DSA:3.20.20.80 2 478 3.4E-186 T 01-11-2018 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 1.4E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 1.4E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 1.4E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 1.4E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.4E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 Pfam PF00232 Glycosyl hydrolase family 1 7 476 6.5E-181 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_21465 fb12f358e59ccfd117bc77da155c85f6 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 375 383 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_13020 123f02c4d7a8dbd52e3e49957bc454a5 263 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_13020 123f02c4d7a8dbd52e3e49957bc454a5 263 SMART SM00382 45 224 7.2E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_13020 123f02c4d7a8dbd52e3e49957bc454a5 263 Gene3D G3DSA:3.40.50.300 6 239 5.0E-58 T 01-11-2018 DOE78_13020 123f02c4d7a8dbd52e3e49957bc454a5 263 SUPERFAMILY SSF52540 19 243 6.15E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13020 123f02c4d7a8dbd52e3e49957bc454a5 263 Pfam PF00005 ABC transporter 37 175 2.7E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_19225 7c03aeb6206cbb4c9cb6030d4a0ea08a 156 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 95 8.7E-27 T 01-11-2018 IPR009293 Uncharacterised protein family UPF0478 DOE78_18645 08f07bd899dffedfc9c260ae716a7b8f 528 SUPERFAMILY SSF56801 24 524 4.84E-137 T 01-11-2018 DOE78_18645 08f07bd899dffedfc9c260ae716a7b8f 528 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 511 1.0E-23 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_18645 08f07bd899dffedfc9c260ae716a7b8f 528 Gene3D G3DSA:3.30.300.310 419 527 3.5E-28 T 01-11-2018 DOE78_18645 08f07bd899dffedfc9c260ae716a7b8f 528 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_18645 08f07bd899dffedfc9c260ae716a7b8f 528 Pfam PF00501 AMP-binding enzyme 25 423 4.7E-79 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_18645 08f07bd899dffedfc9c260ae716a7b8f 528 Gene3D G3DSA:3.40.50.12780 2 416 5.8E-107 T 01-11-2018 DOE78_22670 4e695e0ababa33ee0d9295e113d3ee5c 1062 SUPERFAMILY SSF48208 327 1021 1.63E-11 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 Gene3D G3DSA:3.40.50.720 1 257 5.9E-57 T 01-11-2018 DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 PIRSF PIRSF000094 2 258 6.1E-105 T 01-11-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 4.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.7E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 4.4E-86 T 01-11-2018 DOE78_06715 69e05c80b0da477020c632fc05dcf8ca 258 SUPERFAMILY SSF51735 6 255 1.75E-65 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_17675 4d41b66cfd7226ec975e7503d1fe4eac 359 Pfam PF02618 YceG-like family 54 355 1.2E-80 T 01-11-2018 IPR003770 Endolytic murein transglycosylase DOE78_17675 4d41b66cfd7226ec975e7503d1fe4eac 359 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 20 359 33.365 T 01-11-2018 IPR003770 Endolytic murein transglycosylase DOE78_17675 4d41b66cfd7226ec975e7503d1fe4eac 359 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 15 358 5.7E-109 T 01-11-2018 IPR003770 Endolytic murein transglycosylase DOE78_17675 4d41b66cfd7226ec975e7503d1fe4eac 359 Gene3D G3DSA:1.10.8.1150 48 123 1.4E-27 T 01-11-2018 DOE78_02040 0477ce5bfaf421528f2499ca7ddefa9c 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 126 2.1E-11 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DOE78_02040 0477ce5bfaf421528f2499ca7ddefa9c 292 SUPERFAMILY SSF51735 1 163 7.4E-27 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_02040 0477ce5bfaf421528f2499ca7ddefa9c 292 Pfam PF09130 Domain of unknown function (DUF1932) 193 263 3.2E-10 T 01-11-2018 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal DOE78_02040 0477ce5bfaf421528f2499ca7ddefa9c 292 Gene3D G3DSA:3.40.50.720 2 172 5.0E-36 T 01-11-2018 DOE78_02040 0477ce5bfaf421528f2499ca7ddefa9c 292 SUPERFAMILY SSF48179 166 274 1.87E-21 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_02040 0477ce5bfaf421528f2499ca7ddefa9c 292 Gene3D G3DSA:1.10.1040.10 174 288 3.5E-26 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_16265 a6688fab2d41c1053638b7ee9062854b 349 Pfam PF14493 Helix-turn-helix domain 256 342 2.6E-18 T 01-11-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DOE78_16265 a6688fab2d41c1053638b7ee9062854b 349 PIRSF PIRSF021350 3 347 4.7E-87 T 01-11-2018 IPR008308 Uncharacterised conserved protein UCP021350 DOE78_07365 96ab379d6614553bbb7b232d3a9bf4f0 145 Pfam PF08968 Domain of unknown function (DUF1885) 5 143 6.5E-61 T 01-11-2018 IPR015062 Protein of unknown function DUF1885 DOE78_07365 96ab379d6614553bbb7b232d3a9bf4f0 145 Gene3D G3DSA:1.20.5.850 3 51 6.3E-14 T 01-11-2018 DOE78_07365 96ab379d6614553bbb7b232d3a9bf4f0 145 Gene3D G3DSA:3.30.310.120 52 142 4.6E-29 T 01-11-2018 DOE78_07365 96ab379d6614553bbb7b232d3a9bf4f0 145 SUPERFAMILY SSF111171 6 142 1.12E-41 T 01-11-2018 IPR036294 Rbstp2229-like superfamily DOE78_09385 b2fc1e19dfd1a69a15655c023ab268d9 112 Pfam PF13028 Protein of unknown function (DUF3889) 27 109 3.9E-32 T 01-11-2018 IPR024987 Protein of unknown function DUF3889 DOE78_09385 b2fc1e19dfd1a69a15655c023ab268d9 112 Gene3D G3DSA:3.10.450.390 28 111 1.1E-32 T 01-11-2018 DOE78_22135 8ad64d7b87402b135d2be886cc59305c 327 SUPERFAMILY SSF142338 6 314 1.26E-109 T 01-11-2018 DOE78_22135 8ad64d7b87402b135d2be886cc59305c 327 Hamap MF_00973 Gluconeogenesis factor. 5 319 36.314 T 01-11-2018 IPR010119 Gluconeogenesis factor DOE78_22135 8ad64d7b87402b135d2be886cc59305c 327 Gene3D G3DSA:3.40.50.12300 3 323 1.4E-130 T 01-11-2018 IPR038136 Gluconeogenesis factor superfamily DOE78_22135 8ad64d7b87402b135d2be886cc59305c 327 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 316 7.2E-127 T 01-11-2018 IPR010119 Gluconeogenesis factor DOE78_22135 8ad64d7b87402b135d2be886cc59305c 327 Pfam PF01933 Uncharacterised protein family UPF0052 9 294 1.1E-108 T 01-11-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DOE78_22405 d40c8eae21e3513b4b9e120c41ac6853 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.9E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_22405 d40c8eae21e3513b4b9e120c41ac6853 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.9E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_22405 d40c8eae21e3513b4b9e120c41ac6853 193 SUPERFAMILY SSF48498 80 188 1.06E-18 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_22405 d40c8eae21e3513b4b9e120c41ac6853 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 59 5.4E-16 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_22405 d40c8eae21e3513b4b9e120c41ac6853 193 Gene3D G3DSA:1.10.357.10 2 192 1.5E-53 T 01-11-2018 DOE78_22405 d40c8eae21e3513b4b9e120c41ac6853 193 SUPERFAMILY SSF46689 6 73 1.44E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_18070 11a22953802e2d059d3276aba8c597d8 193 SUPERFAMILY SSF52540 2 192 1.76E-38 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_18070 11a22953802e2d059d3276aba8c597d8 193 Gene3D G3DSA:3.40.50.300 1 193 8.5E-54 T 01-11-2018 DOE78_18070 11a22953802e2d059d3276aba8c597d8 193 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 27.96 T 01-11-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DOE78_18070 11a22953802e2d059d3276aba8c597d8 193 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 1.7E-69 T 01-11-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DOE78_18070 11a22953802e2d059d3276aba8c597d8 193 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 190 3.2E-12 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_18070 11a22953802e2d059d3276aba8c597d8 193 Pfam PF01926 50S ribosome-binding GTPase 26 143 7.9E-21 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_01370 e586a30fa0bc847dbe6f2704fa6a1368 157 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 157 38.877 T 01-11-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DOE78_01370 e586a30fa0bc847dbe6f2704fa6a1368 157 Pfam PF13581 Histidine kinase-like ATPase domain 12 141 1.9E-27 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_01370 e586a30fa0bc847dbe6f2704fa6a1368 157 Gene3D G3DSA:3.30.565.10 6 151 9.5E-26 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_01370 e586a30fa0bc847dbe6f2704fa6a1368 157 SUPERFAMILY SSF55874 34 138 1.58E-12 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_01370 e586a30fa0bc847dbe6f2704fa6a1368 157 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 2 153 7.5E-70 T 01-11-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DOE78_06295 04dfe224308ab22d39ece1a9be500337 319 Gene3D G3DSA:3.20.20.70 4 302 4.3E-79 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_06295 04dfe224308ab22d39ece1a9be500337 319 Pfam PF00682 HMGL-like 121 244 1.4E-23 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DOE78_06295 04dfe224308ab22d39ece1a9be500337 319 SUPERFAMILY SSF51569 2 254 2.38E-42 T 01-11-2018 DOE78_12875 65678a312a7cfb5730779df5c635fa3b 250 SMART SM00382 31 205 3.3E-19 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_12875 65678a312a7cfb5730779df5c635fa3b 250 SUPERFAMILY SSF52540 6 222 6.71E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12875 65678a312a7cfb5730779df5c635fa3b 250 Pfam PF00005 ABC transporter 22 155 1.2E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_12875 65678a312a7cfb5730779df5c635fa3b 250 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_12875 65678a312a7cfb5730779df5c635fa3b 250 Gene3D G3DSA:3.40.50.300 2 218 2.1E-62 T 01-11-2018 DOE78_10720 39e0aa5bb0e7de3ae441f27dee9dd2f7 211 SUPERFAMILY SSF46785 6 191 1.72E-34 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10720 39e0aa5bb0e7de3ae441f27dee9dd2f7 211 Gene3D G3DSA:1.10.10.10 4 90 1.2E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10720 39e0aa5bb0e7de3ae441f27dee9dd2f7 211 SMART SM00420 11 58 0.0017 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_10720 39e0aa5bb0e7de3ae441f27dee9dd2f7 211 Pfam PF08220 DeoR-like helix-turn-helix domain 12 54 3.3E-8 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_13000 5b821d15aa4083c83ac721a13a40df01 256 Hamap MF_00443 Thiazole synthase [thiG]. 4 256 40.31 T 01-11-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DOE78_13000 5b821d15aa4083c83ac721a13a40df01 256 SUPERFAMILY SSF110399 3 238 2.09E-77 T 01-11-2018 DOE78_13000 5b821d15aa4083c83ac721a13a40df01 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 250 9.2E-106 T 01-11-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DOE78_13000 5b821d15aa4083c83ac721a13a40df01 256 Gene3D G3DSA:3.20.20.70 2 255 2.0E-105 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_23475 c874338db062be0a287f4a7265389b71 540 Pfam PF04434 SWIM zinc finger 78 98 5.3E-4 T 01-11-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 DOE78_18490 5a8e55544724cd952b321a9237298677 293 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 18 285 3.0E-125 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18490 5a8e55544724cd952b321a9237298677 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 6.7E-38 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18490 5a8e55544724cd952b321a9237298677 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 6.7E-38 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18490 5a8e55544724cd952b321a9237298677 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 6.7E-38 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18490 5a8e55544724cd952b321a9237298677 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 6.7E-38 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18490 5a8e55544724cd952b321a9237298677 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 6.7E-38 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18490 5a8e55544724cd952b321a9237298677 293 SUPERFAMILY SSF52096 31 288 4.97E-81 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_18490 5a8e55544724cd952b321a9237298677 293 Pfam PF01039 Carboxyl transferase domain 67 244 1.8E-17 T 01-11-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DOE78_18490 5a8e55544724cd952b321a9237298677 293 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 284 38.452 T 01-11-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DOE78_18490 5a8e55544724cd952b321a9237298677 293 Gene3D G3DSA:3.90.226.10 31 284 2.0E-86 T 01-11-2018 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 PIRSF PIRSF000188 1 353 6.4E-170 T 01-11-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 1.7E-22 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 1.7E-22 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 1.7E-22 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.7E-22 T 01-11-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 1.4E-6 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 347 3.3E-12 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 SUPERFAMILY SSF53223 4 143 4.48E-49 T 01-11-2018 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 SMART SM00839 144 351 1.6E-76 T 01-11-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 Gene3D G3DSA:3.40.50.720 134 336 1.2E-156 T 01-11-2018 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 131 3.0E-27 T 01-11-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 SUPERFAMILY SSF51735 141 347 2.52E-60 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 01-11-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DOE78_16775 7866ae4c44f18026fab780776960d3c9 364 Gene3D G3DSA:3.40.50.10860 10 343 1.2E-156 T 01-11-2018 DOE78_11165 da22f4b15ac441645c77e60ec24c8ba5 177 SUPERFAMILY SSF88659 114 176 1.31E-15 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_11165 da22f4b15ac441645c77e60ec24c8ba5 177 Gene3D G3DSA:1.10.10.10 118 176 4.0E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_11165 da22f4b15ac441645c77e60ec24c8ba5 177 Pfam PF04542 Sigma-70 region 2 22 85 4.2E-15 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_11165 da22f4b15ac441645c77e60ec24c8ba5 177 Gene3D G3DSA:1.10.1740.10 2 117 4.1E-24 T 01-11-2018 DOE78_11165 da22f4b15ac441645c77e60ec24c8ba5 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 175 3.1E-30 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_11165 da22f4b15ac441645c77e60ec24c8ba5 177 Pfam PF08281 Sigma-70, region 4 120 169 1.5E-12 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_11165 da22f4b15ac441645c77e60ec24c8ba5 177 SUPERFAMILY SSF88946 11 96 5.23E-21 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 SUPERFAMILY SSF51161 90 228 9.98E-49 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 4.6E-115 T 01-11-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 Gene3D G3DSA:2.160.10.10 85 236 7.6E-48 T 01-11-2018 DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 198 1.6E-7 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 01-11-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 Gene3D G3DSA:3.30.70.250 1 84 7.2E-35 T 01-11-2018 DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 45.762 T 01-11-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 8.6E-5 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 9.1E-10 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_07280 4d19b005cfe2390f3d9b94e8339d695f 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 3.4E-36 T 01-11-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 1.6E-15 T 01-11-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 1.7E-44 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 SUPERFAMILY SSF54980 402 479 3.96E-25 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Pfam PF03764 Elongation factor G, domain IV 477 595 2.4E-46 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Pfam PF14492 Elongation Factor G, domain II 402 475 5.9E-35 T 01-11-2018 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Gene3D G3DSA:3.30.70.870 404 481 9.7E-33 T 01-11-2018 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 112.89 T 01-11-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 SUPERFAMILY SSF50447 263 402 8.58E-37 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Gene3D G3DSA:3.30.70.240 602 672 5.4E-94 T 01-11-2018 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 6.3E-71 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Gene3D G3DSA:2.40.30.10 292 403 4.2E-46 T 01-11-2018 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 SUPERFAMILY SSF54980 598 688 1.06E-30 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Pfam PF00679 Elongation factor G C-terminus 598 684 4.2E-32 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Gene3D G3DSA:3.40.50.300 1 291 6.6E-114 T 01-11-2018 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 SMART SM00889 478 596 8.1E-73 T 01-11-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 SUPERFAMILY SSF52540 6 280 7.22E-109 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 01-11-2018 IPR031157 Tr-type G domain, conserved site DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 01-11-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 Gene3D G3DSA:3.30.230.10 482 685 5.4E-94 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 SMART SM00838 598 685 1.7E-56 T 01-11-2018 IPR000640 Elongation factor EFG, domain V-like DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 SUPERFAMILY SSF54211 477 597 1.24E-43 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.4E-17 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.4E-17 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.4E-17 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.4E-17 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00690 38f8b324f403383eac683f55b8e84eb7 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.4E-17 T 01-11-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DOE78_00625 303337114e26feb0dad9a9be03832f6d 47 SUPERFAMILY SSF57829 3 47 7.94E-14 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DOE78_00625 303337114e26feb0dad9a9be03832f6d 47 Pfam PF00471 Ribosomal protein L33 3 47 2.7E-17 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00625 303337114e26feb0dad9a9be03832f6d 47 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 47 14.913 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00625 303337114e26feb0dad9a9be03832f6d 47 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 47 1.2E-14 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00625 303337114e26feb0dad9a9be03832f6d 47 Gene3D G3DSA:2.20.28.120 1 47 7.4E-16 T 01-11-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_03855 daf51575a4b1d121593153ffb7bfebd4 442 Pfam PF14398 YheC/D like ATP-grasp 185 439 3.0E-56 T 01-11-2018 IPR026838 Endospore coat-associated protein YheC/D DOE78_03855 daf51575a4b1d121593153ffb7bfebd4 442 Gene3D G3DSA:3.30.470.20 304 431 5.3E-7 T 01-11-2018 DOE78_03855 daf51575a4b1d121593153ffb7bfebd4 442 SUPERFAMILY SSF56059 198 408 3.94E-15 T 01-11-2018 DOE78_10895 b3a49244cdaff13d01774ad41274a2c6 327 Gene3D G3DSA:3.90.245.10 1 316 5.6E-72 T 01-11-2018 IPR036452 Ribonucleoside hydrolase-like DOE78_10895 b3a49244cdaff13d01774ad41274a2c6 327 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 303 2.9E-60 T 01-11-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DOE78_10895 b3a49244cdaff13d01774ad41274a2c6 327 SUPERFAMILY SSF53590 1 310 4.06E-75 T 01-11-2018 IPR036452 Ribonucleoside hydrolase-like DOE78_21650 aae7015cb95e2a26ed338fbdfe496576 49 Pfam PF13165 Six-cysteine peptide SCIFF 2 45 1.1E-21 T 01-11-2018 IPR023975 Six-cysteine peptide SCIFF DOE78_21650 aae7015cb95e2a26ed338fbdfe496576 49 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 2 44 1.4E-22 T 01-11-2018 IPR023975 Six-cysteine peptide SCIFF DOE78_04850 5558886cf5f09c6cb903b2bf79f996df 237 Pfam PF09347 Domain of unknown function (DUF1989) 8 179 6.9E-49 T 01-11-2018 IPR018959 Protein of unknown function DUF1989 DOE78_04850 5558886cf5f09c6cb903b2bf79f996df 237 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 4 234 2.9E-91 T 01-11-2018 IPR017792 Urea carboxylase-associated protein 2 DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 SUPERFAMILY SSF50346 100 170 1.88E-20 T 01-11-2018 IPR011033 PRC-barrel-like superfamily DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 Pfam PF05239 PRC-barrel domain 97 171 1.8E-14 T 01-11-2018 IPR027275 PRC-barrel domain DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 SUPERFAMILY SSF50447 3 91 2.72E-19 T 01-11-2018 IPR009000 Translation protein, beta-barrel domain superfamily DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 170 23.703 T 01-11-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 Pfam PF01782 RimM N-terminal domain 7 91 2.6E-20 T 01-11-2018 IPR002676 RimM, N-terminal GO:0006364 DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 Gene3D G3DSA:2.40.30.60 5 92 4.4E-18 T 01-11-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 Gene3D G3DSA:2.30.30.240 95 172 8.4E-22 T 01-11-2018 DOE78_08065 5d414e31b95bbeec242e58e3138da1e1 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 170 1.3E-50 T 01-11-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DOE78_09740 b5b4b70ca7793e4751b5b41f70a8948e 179 SUPERFAMILY SSF55729 2 175 2.02E-45 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09740 b5b4b70ca7793e4751b5b41f70a8948e 179 Gene3D G3DSA:3.40.630.30 1 177 5.6E-48 T 01-11-2018 DOE78_09740 b5b4b70ca7793e4751b5b41f70a8948e 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 151 1.1E-23 T 01-11-2018 IPR000182 GNAT domain DOE78_06250 c464eddc109e6091b44e6c7164925f37 278 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 157 182 - T 01-11-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DOE78_06250 c464eddc109e6091b44e6c7164925f37 278 SUPERFAMILY SSF48576 7 267 2.72E-73 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_06250 c464eddc109e6091b44e6c7164925f37 278 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 126 141 - T 01-11-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DOE78_06250 c464eddc109e6091b44e6c7164925f37 278 Gene3D G3DSA:1.10.600.10 1 278 2.8E-90 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_06250 c464eddc109e6091b44e6c7164925f37 278 Pfam PF00494 Squalene/phytoene synthase 16 262 6.8E-62 T 01-11-2018 DOE78_00450 b29d2dd2f30f60c4b1bd1f442e96d6f8 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 5.9E-41 T 01-11-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DOE78_00450 b29d2dd2f30f60c4b1bd1f442e96d6f8 121 Pfam PF02152 Dihydroneopterin aldolase 4 115 1.9E-35 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DOE78_00450 b29d2dd2f30f60c4b1bd1f442e96d6f8 121 SUPERFAMILY SSF55620 2 119 1.89E-39 T 01-11-2018 DOE78_00450 b29d2dd2f30f60c4b1bd1f442e96d6f8 121 SMART SM00905 4 117 1.2E-47 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DOE78_00450 b29d2dd2f30f60c4b1bd1f442e96d6f8 121 Gene3D G3DSA:3.30.1130.10 1 120 1.5E-45 T 01-11-2018 DOE78_00450 b29d2dd2f30f60c4b1bd1f442e96d6f8 121 TIGRFAM TIGR00526 folB_dom: FolB domain 1 120 7.3E-38 T 01-11-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DOE78_00910 60544d36ec88a4b96edfa94e17736fa8 240 SUPERFAMILY SSF53187 43 231 4.39E-50 T 01-11-2018 DOE78_00910 60544d36ec88a4b96edfa94e17736fa8 240 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 42 229 6.5E-84 T 01-11-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 DOE78_00910 60544d36ec88a4b96edfa94e17736fa8 240 SMART SM00646 116 227 1.6E-32 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_00910 60544d36ec88a4b96edfa94e17736fa8 240 Gene3D G3DSA:3.40.630.40 40 235 3.2E-56 T 01-11-2018 DOE78_00910 60544d36ec88a4b96edfa94e17736fa8 240 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 44 227 4.0E-49 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23400 6b4e108c7f7bdd63ff6a0fbbbedbe12d 187 TIGRFAM TIGR01076 sortase_fam: sortase 63 185 4.2E-33 T 01-11-2018 IPR005754 Sortase family DOE78_23400 6b4e108c7f7bdd63ff6a0fbbbedbe12d 187 SUPERFAMILY SSF63817 52 185 2.09E-30 T 01-11-2018 IPR023365 Sortase domain superfamily DOE78_23400 6b4e108c7f7bdd63ff6a0fbbbedbe12d 187 Pfam PF04203 Sortase family 65 186 4.3E-25 T 01-11-2018 IPR005754 Sortase family DOE78_23400 6b4e108c7f7bdd63ff6a0fbbbedbe12d 187 Gene3D G3DSA:2.40.260.10 19 187 9.8E-36 T 01-11-2018 IPR023365 Sortase domain superfamily DOE78_04305 cc0b66c335322551501309c2ba02599d 426 SUPERFAMILY SSF51445 4 341 9.33E-68 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_04305 cc0b66c335322551501309c2ba02599d 426 Gene3D G3DSA:3.20.20.70 1 343 7.4E-149 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_04305 cc0b66c335322551501309c2ba02599d 426 Gene3D G3DSA:2.60.40.1180 344 426 1.4E-22 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_04305 cc0b66c335322551501309c2ba02599d 426 SUPERFAMILY SSF51011 347 425 6.55E-13 T 01-11-2018 DOE78_04305 cc0b66c335322551501309c2ba02599d 426 PRINTS PR00740 Glycosyl hydrolase family 27 signature 4 23 1.7E-11 T 01-11-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_04305 cc0b66c335322551501309c2ba02599d 426 PRINTS PR00740 Glycosyl hydrolase family 27 signature 98 119 1.7E-11 T 01-11-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_04305 cc0b66c335322551501309c2ba02599d 426 PRINTS PR00740 Glycosyl hydrolase family 27 signature 196 214 1.7E-11 T 01-11-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_04305 cc0b66c335322551501309c2ba02599d 426 PRINTS PR00740 Glycosyl hydrolase family 27 signature 297 318 1.7E-11 T 01-11-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_04305 cc0b66c335322551501309c2ba02599d 426 Pfam PF16499 Alpha galactosidase A 9 115 1.8E-6 T 01-11-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_04305 cc0b66c335322551501309c2ba02599d 426 Pfam PF16499 Alpha galactosidase A 158 339 1.8E-15 T 01-11-2018 IPR002241 Glycoside hydrolase, family 27 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 361 2.5E-165 T 01-11-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 PIRSF PIRSF006004 8 361 5.9E-139 T 01-11-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 Gene3D G3DSA:3.20.20.70 79 342 1.4E-100 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 SUPERFAMILY SSF102114 98 314 4.32E-14 T 01-11-2018 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 Gene3D G3DSA:1.10.150.530 1 75 1.6E-20 T 01-11-2018 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 Pfam PF13394 4Fe-4S single cluster domain 123 226 1.7E-6 T 01-11-2018 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 15 357 73.427 T 01-11-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DOE78_07935 81bc0eaa89c929486cc6aebb5519860f 361 Pfam PF04055 Radical SAM superfamily 118 290 7.5E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_08830 804e06f62a2f6cfbdcda10c51851d33b 300 SUPERFAMILY SSF161098 27 300 3.01E-63 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08830 804e06f62a2f6cfbdcda10c51851d33b 300 Gene3D G3DSA:1.10.3720.10 21 291 2.6E-55 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08830 804e06f62a2f6cfbdcda10c51851d33b 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 289 5.5E-15 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_20695 5cdff1be06e68a81941aa96afef8994c 370 Pfam PF00149 Calcineurin-like phosphoesterase 144 307 3.6E-13 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_20695 5cdff1be06e68a81941aa96afef8994c 370 SUPERFAMILY SSF56300 142 362 1.97E-31 T 01-11-2018 DOE78_20695 5cdff1be06e68a81941aa96afef8994c 370 Gene3D G3DSA:3.60.21.10 142 324 6.7E-22 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_07705 b326bf34adc3718cee91d8f921d84979 324 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 25.104 T 01-11-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07705 b326bf34adc3718cee91d8f921d84979 324 Pfam PF00953 Glycosyl transferase family 4 83 248 1.1E-40 T 01-11-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DOE78_07705 b326bf34adc3718cee91d8f921d84979 324 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 48 60 1.9E-4 T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07705 b326bf34adc3718cee91d8f921d84979 324 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 01-11-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07705 b326bf34adc3718cee91d8f921d84979 324 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 323 4.8E-124 T 01-11-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_08955 f169ed29d00f536d32dd6838aba3b93e 453 Pfam PF05167 Uncharacterised ACR (DUF711) 14 417 3.2E-175 T 01-11-2018 IPR007841 Uncharacterised protein family UPF0210 DOE78_08955 f169ed29d00f536d32dd6838aba3b93e 453 SUPERFAMILY SSF51998 5 448 7.42E-173 T 01-11-2018 DOE78_08955 f169ed29d00f536d32dd6838aba3b93e 453 Gene3D G3DSA:3.20.70.20 3 453 6.3E-172 T 01-11-2018 DOE78_08955 f169ed29d00f536d32dd6838aba3b93e 453 Hamap MF_01221 UPF0210 protein . 3 453 50.187 T 01-11-2018 IPR007841 Uncharacterised protein family UPF0210 DOE78_12105 e6dd3fd334f7c421e6abed6deedeeaf8 338 SUPERFAMILY SSF51726 4 330 2.22E-30 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_12105 e6dd3fd334f7c421e6abed6deedeeaf8 338 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 27 331 1.1E-23 T 01-11-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DOE78_12105 e6dd3fd334f7c421e6abed6deedeeaf8 338 Gene3D G3DSA:3.20.20.210 1 337 6.8E-43 T 01-11-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DOE78_22975 c29a20048d5cbbb1ea0df3edf3aad0d6 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 1.3E-76 T 01-11-2018 IPR015796 Impact family, bacterial/archaeal DOE78_22975 c29a20048d5cbbb1ea0df3edf3aad0d6 211 SUPERFAMILY SSF54980 134 199 2.37E-10 T 01-11-2018 IPR035647 EF-G domain III/V-like DOE78_22975 c29a20048d5cbbb1ea0df3edf3aad0d6 211 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 2.0E-17 T 01-11-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DOE78_22975 c29a20048d5cbbb1ea0df3edf3aad0d6 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 01-11-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DOE78_22975 c29a20048d5cbbb1ea0df3edf3aad0d6 211 Pfam PF01205 Uncharacterized protein family UPF0029 20 123 1.1E-31 T 01-11-2018 IPR001498 Impact, N-terminal DOE78_22975 c29a20048d5cbbb1ea0df3edf3aad0d6 211 Gene3D G3DSA:3.30.230.30 1 132 4.6E-49 T 01-11-2018 IPR036956 Impact, N-terminal domain superfamily DOE78_22975 c29a20048d5cbbb1ea0df3edf3aad0d6 211 SUPERFAMILY SSF54211 2 131 4.17E-43 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_05820 3554ccde7e302a843adfc03143a11020 288 Gene3D G3DSA:3.30.1240.10 83 196 2.3E-73 T 01-11-2018 DOE78_05820 3554ccde7e302a843adfc03143a11020 288 Gene3D G3DSA:3.40.50.1000 5 264 2.3E-73 T 01-11-2018 IPR023214 HAD superfamily DOE78_05820 3554ccde7e302a843adfc03143a11020 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 241 1.2E-16 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_05820 3554ccde7e302a843adfc03143a11020 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 267 8.4E-44 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_05820 3554ccde7e302a843adfc03143a11020 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 4.1E-52 T 01-11-2018 DOE78_05820 3554ccde7e302a843adfc03143a11020 288 SUPERFAMILY SSF56784 2 273 1.46E-55 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_24065 bc0ec4492d53b0500ddde964863ef198 149 SUPERFAMILY SSF55961 1 144 4.17E-18 T 01-11-2018 DOE78_24065 bc0ec4492d53b0500ddde964863ef198 149 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 143 1.2E-11 T 01-11-2018 IPR019587 Polyketide cyclase/dehydrase DOE78_24065 bc0ec4492d53b0500ddde964863ef198 149 Gene3D G3DSA:3.30.530.20 3 149 2.4E-17 T 01-11-2018 IPR023393 START-like domain superfamily DOE78_21190 4200485e14e2c366f6d0dcdc0b620cda 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 41.391 T 01-11-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DOE78_21190 4200485e14e2c366f6d0dcdc0b620cda 127 SUPERFAMILY SSF51230 3 126 1.14E-48 T 01-11-2018 IPR011053 Single hybrid motif DOE78_21190 4200485e14e2c366f6d0dcdc0b620cda 127 Gene3D G3DSA:2.40.50.100 1 125 1.7E-54 T 01-11-2018 DOE78_21190 4200485e14e2c366f6d0dcdc0b620cda 127 Pfam PF01597 Glycine cleavage H-protein 7 126 1.6E-51 T 01-11-2018 IPR033753 Glycine cleavage system H-protein/Simiate DOE78_21190 4200485e14e2c366f6d0dcdc0b620cda 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 2.9E-59 T 01-11-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DOE78_21190 4200485e14e2c366f6d0dcdc0b620cda 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 01-11-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 Gene3D G3DSA:3.20.20.70 93 357 9.1E-102 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 SMART SM00830 10 89 8.8E-23 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 101 4.4E-42 T 01-11-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 Pfam PF00793 DAHP synthetase I family 112 350 1.6E-82 T 01-11-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 SUPERFAMILY SSF51569 31 352 3.66E-102 T 01-11-2018 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 Gene3D G3DSA:1.20.59.10 8 92 1.8E-27 T 01-11-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 Pfam PF01817 Chorismate mutase type II 10 87 5.6E-18 T 01-11-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_19205 56c7d2599a870e24b1f9c48db14e3c60 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 9.4E-122 T 01-11-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 SMART SM00382 276 472 22.0 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 SMART SM00382 27 224 1.5E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 SUPERFAMILY SSF52540 263 480 2.51E-41 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 Pfam PF00005 ABC transporter 18 167 5.7E-26 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 Gene3D G3DSA:3.40.50.300 256 490 2.4E-39 T 01-11-2018 DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 Gene3D G3DSA:3.40.50.300 1 233 5.7E-55 T 01-11-2018 DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 Pfam PF00005 ABC transporter 268 422 9.3E-20 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_12295 69716a0ab137dfed024076b02ed58bed 495 SUPERFAMILY SSF52540 2 226 1.49E-52 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14220 fce6039bbae582deef9a8907e30dba53 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 78 2.4E-29 T 01-11-2018 IPR005370 Uncharacterised protein family UPF0180 DOE78_14220 fce6039bbae582deef9a8907e30dba53 81 Hamap MF_00506 UPF0180 protein . 1 79 27.243 T 01-11-2018 IPR005370 Uncharacterised protein family UPF0180 DOE78_14220 fce6039bbae582deef9a8907e30dba53 81 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 1 47 2.0E-12 T 01-11-2018 IPR005370 Uncharacterised protein family UPF0180 DOE78_06030 35cf06f26142417c5d2a27e661745fe5 311 Gene3D G3DSA:3.40.50.1400 8 304 1.9E-109 T 01-11-2018 DOE78_06030 35cf06f26142417c5d2a27e661745fe5 311 Gene3D G3DSA:3.40.50.1400 148 289 1.9E-109 T 01-11-2018 DOE78_06030 35cf06f26142417c5d2a27e661745fe5 311 TIGRFAM TIGR00109 hemH: ferrochelatase 3 308 1.1E-101 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DOE78_06030 35cf06f26142417c5d2a27e661745fe5 311 ProSitePatterns PS00534 Ferrochelatase signature. 178 196 - T 01-11-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DOE78_06030 35cf06f26142417c5d2a27e661745fe5 311 SUPERFAMILY SSF53800 4 308 4.74E-92 T 01-11-2018 DOE78_06030 35cf06f26142417c5d2a27e661745fe5 311 Hamap MF_00323 Ferrochelatase [hemH]. 4 308 32.616 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DOE78_06030 35cf06f26142417c5d2a27e661745fe5 311 Pfam PF00762 Ferrochelatase 7 307 2.3E-85 T 01-11-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DOE78_18365 69768b820f6c4d8d8909cae6d9ef5d84 287 Pfam PF08812 YtxC-like family 53 264 1.8E-47 T 01-11-2018 IPR014199 Sporulation protein YtxC DOE78_10750 681fc43907179844cf4e7aab4fdea3bc 394 Pfam PF00155 Aminotransferase class I and II 32 382 3.3E-56 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_10750 681fc43907179844cf4e7aab4fdea3bc 394 SUPERFAMILY SSF53383 6 388 3.85E-103 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_10750 681fc43907179844cf4e7aab4fdea3bc 394 Gene3D G3DSA:3.40.640.10 44 284 2.7E-116 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_10750 681fc43907179844cf4e7aab4fdea3bc 394 Gene3D G3DSA:3.90.1150.10 22 382 2.7E-116 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_10750 681fc43907179844cf4e7aab4fdea3bc 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DOE78_18585 50f49985b5fc5dbcf1105892ede5e8bc 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 01-11-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DOE78_18585 50f49985b5fc5dbcf1105892ede5e8bc 170 PIRSF PIRSF006443 1 170 4.3E-65 T 01-11-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 DOE78_18585 50f49985b5fc5dbcf1105892ede5e8bc 170 SMART SM00852 17 162 5.4E-25 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_18585 50f49985b5fc5dbcf1105892ede5e8bc 170 Pfam PF00994 Probable molybdopterin binding domain 18 161 5.4E-32 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_18585 50f49985b5fc5dbcf1105892ede5e8bc 170 SUPERFAMILY SSF53218 8 166 4.32E-40 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily DOE78_18585 50f49985b5fc5dbcf1105892ede5e8bc 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 157 3.4E-34 T 01-11-2018 IPR001453 MoaB/Mog domain DOE78_18585 50f49985b5fc5dbcf1105892ede5e8bc 170 Gene3D G3DSA:3.40.980.10 1 169 8.8E-49 T 01-11-2018 IPR036425 MoaB/Mog-like domain superfamily DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 5.0E-42 T 01-11-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 Pfam PF02785 Biotin carboxylase C-terminal domain 335 439 5.6E-31 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 SMART SM00878 335 439 5.2E-41 T 01-11-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 Gene3D G3DSA:3.30.470.20 86 438 3.2E-150 T 01-11-2018 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 SUPERFAMILY SSF56059 82 345 4.88E-67 T 01-11-2018 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 1.4E-73 T 01-11-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 Gene3D G3DSA:3.40.50.20 1 84 3.5E-32 T 01-11-2018 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 SUPERFAMILY SSF52440 2 112 1.08E-42 T 01-11-2018 IPR016185 Pre-ATP-grasp domain superfamily DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 Gene3D G3DSA:3.30.1490.20 130 201 3.2E-150 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_07640 b8e9366d0d330ff46321d6860ae23a27 444 SUPERFAMILY SSF51246 330 439 1.46E-33 T 01-11-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 292 5.3E-107 T 01-11-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 PRINTS PR00990 Ribokinase signature 105 118 3.0E-34 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 PRINTS PR00990 Ribokinase signature 173 188 3.0E-34 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 PRINTS PR00990 Ribokinase signature 7 28 3.0E-34 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 PRINTS PR00990 Ribokinase signature 209 220 3.0E-34 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 PRINTS PR00990 Ribokinase signature 34 53 3.0E-34 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 Pfam PF00294 pfkB family carbohydrate kinase 3 286 2.7E-73 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 Hamap MF_01987 Ribokinase [rbsK]. 3 293 26.829 T 01-11-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 Gene3D G3DSA:3.40.1190.20 1 293 3.7E-102 T 01-11-2018 IPR029056 Ribokinase-like DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 238 251 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_22780 1bdfab98b0a4623a10a0357f1d905f1a 302 SUPERFAMILY SSF53613 5 295 6.7E-85 T 01-11-2018 IPR029056 Ribokinase-like DOE78_08290 97542fb7d3590ee65808333a20a90126 156 SUPERFAMILY SSF50341 4 146 1.1E-39 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DOE78_08290 97542fb7d3590ee65808333a20a90126 156 SMART SM00260 6 143 2.0E-36 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_08290 97542fb7d3590ee65808333a20a90126 156 Pfam PF01584 CheW-like domain 11 144 1.3E-37 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_08290 97542fb7d3590ee65808333a20a90126 156 Gene3D G3DSA:2.30.30.40 12 137 1.5E-43 T 01-11-2018 DOE78_08290 97542fb7d3590ee65808333a20a90126 156 Gene3D G3DSA:2.40.50.180 29 138 1.5E-43 T 01-11-2018 DOE78_15345 3795515cb0b63e44dc64c5024a172c6f 287 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 135 263 1.8E-46 T 01-11-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 DOE78_15345 3795515cb0b63e44dc64c5024a172c6f 287 SUPERFAMILY SSF55166 125 272 7.59E-40 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DOE78_15345 3795515cb0b63e44dc64c5024a172c6f 287 Gene3D G3DSA:3.30.1380.10 74 287 1.0E-84 T 01-11-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 Pfam PF03466 LysR substrate binding domain 89 294 1.7E-20 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 Gene3D G3DSA:1.10.10.10 1 91 2.5E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 Gene3D G3DSA:3.40.190.10 162 268 2.8E-25 T 01-11-2018 DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.3E-22 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 SUPERFAMILY SSF46785 1 86 1.03E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 SUPERFAMILY SSF53850 89 297 9.64E-24 T 01-11-2018 DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 Gene3D G3DSA:3.40.190.10 92 288 2.8E-25 T 01-11-2018 DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_06335 8460ba3b4ff76ac28beda72b285a7a86 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-10 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_01630 9ed443967b24f85120b208a2a5655cf5 276 Pfam PF00005 ABC transporter 29 186 1.2E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_01630 9ed443967b24f85120b208a2a5655cf5 276 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_01630 9ed443967b24f85120b208a2a5655cf5 276 Gene3D G3DSA:3.40.50.300 6 274 2.6E-75 T 01-11-2018 DOE78_01630 9ed443967b24f85120b208a2a5655cf5 276 SUPERFAMILY SSF52540 8 258 8.87E-58 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01630 9ed443967b24f85120b208a2a5655cf5 276 SMART SM00382 37 236 2.7E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01630 9ed443967b24f85120b208a2a5655cf5 276 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 27 261 3.9E-96 T 01-11-2018 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 DOE78_04365 e40c4990e9a8c4019d8fd5f729d47cab 495 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 296 488 2.3E-43 T 01-11-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DOE78_04365 e40c4990e9a8c4019d8fd5f729d47cab 495 SUPERFAMILY SSF51011 359 493 3.96E-30 T 01-11-2018 DOE78_04365 e40c4990e9a8c4019d8fd5f729d47cab 495 Gene3D G3DSA:3.20.20.80 17 378 5.1E-203 T 01-11-2018 DOE78_04365 e40c4990e9a8c4019d8fd5f729d47cab 495 SMART SM00813 296 488 3.3E-86 T 01-11-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DOE78_04365 e40c4990e9a8c4019d8fd5f729d47cab 495 SUPERFAMILY SSF51445 16 378 4.03E-103 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_04365 e40c4990e9a8c4019d8fd5f729d47cab 495 Gene3D G3DSA:2.60.40.1180 13 492 5.1E-203 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_03550 8d8c001d1212771f02b7272fb67408d5 280 Gene3D G3DSA:1.10.150.130 3 95 2.9E-17 T 01-11-2018 IPR010998 Integrase/recombinase, N-terminal DOE78_03550 8d8c001d1212771f02b7272fb67408d5 280 SUPERFAMILY SSF56349 6 262 5.3E-50 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DOE78_03550 8d8c001d1212771f02b7272fb67408d5 280 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 85 3.0E-12 T 01-11-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DOE78_03550 8d8c001d1212771f02b7272fb67408d5 280 Pfam PF00589 Phage integrase family 106 260 1.7E-32 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DOE78_03550 8d8c001d1212771f02b7272fb67408d5 280 Gene3D G3DSA:1.10.443.10 99 277 5.3E-43 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DOE78_00410 28f20bf5e3fe5427e390b52ec2e94ce7 258 Gene3D G3DSA:3.30.420.40 1 88 7.3E-35 T 01-11-2018 DOE78_00410 28f20bf5e3fe5427e390b52ec2e94ce7 258 Gene3D G3DSA:3.30.420.40 89 258 9.1E-63 T 01-11-2018 DOE78_00410 28f20bf5e3fe5427e390b52ec2e94ce7 258 Pfam PF03309 Type III pantothenate kinase 3 206 8.6E-76 T 01-11-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DOE78_00410 28f20bf5e3fe5427e390b52ec2e94ce7 258 SUPERFAMILY SSF53067 2 122 1.84E-39 T 01-11-2018 DOE78_00410 28f20bf5e3fe5427e390b52ec2e94ce7 258 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 250 4.4E-89 T 01-11-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DOE78_00410 28f20bf5e3fe5427e390b52ec2e94ce7 258 SUPERFAMILY SSF53067 124 253 4.21E-40 T 01-11-2018 DOE78_00410 28f20bf5e3fe5427e390b52ec2e94ce7 258 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 37.546 T 01-11-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DOE78_23700 be5b14d8b944d020f85c26bcd89692f4 173 SUPERFAMILY SSF81573 76 134 4.71E-10 T 01-11-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DOE78_23700 be5b14d8b944d020f85c26bcd89692f4 173 Hamap MF_01398 ATP synthase subunit b [atpF]. 14 151 14.086 T 01-11-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DOE78_23700 be5b14d8b944d020f85c26bcd89692f4 173 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 23 168 3.9E-46 T 01-11-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DOE78_23700 be5b14d8b944d020f85c26bcd89692f4 173 Pfam PF00430 ATP synthase B/B' CF(0) 20 150 1.3E-39 T 01-11-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DOE78_22885 0ded78b9dbded880cee1372e273a5127 121 Gene3D G3DSA:3.30.160.170 22 117 5.7E-31 T 01-11-2018 IPR035924 FlaG-like superfamily DOE78_22885 0ded78b9dbded880cee1372e273a5127 121 Pfam PF03646 FlaG protein 29 119 6.7E-24 T 01-11-2018 IPR005186 FlaG protein DOE78_22885 0ded78b9dbded880cee1372e273a5127 121 SUPERFAMILY SSF160214 35 121 1.7E-25 T 01-11-2018 IPR035924 FlaG-like superfamily DOE78_10870 1a1d45cf9f7814b349dcbca844374981 339 SUPERFAMILY SSF111126 41 168 5.23E-6 T 01-11-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily DOE78_10870 1a1d45cf9f7814b349dcbca844374981 339 Gene3D G3DSA:3.30.750.24 216 335 2.5E-27 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_10870 1a1d45cf9f7814b349dcbca844374981 339 SUPERFAMILY SSF52091 219 330 1.08E-6 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_10970 88992904bbfd5dc5b75d228a1578e1b2 422 SUPERFAMILY SSF53474 201 416 8.83E-30 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10970 88992904bbfd5dc5b75d228a1578e1b2 422 Gene3D G3DSA:3.40.50.1820 166 421 1.0E-49 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10970 88992904bbfd5dc5b75d228a1578e1b2 422 Pfam PF00756 Putative esterase 207 414 1.7E-14 T 01-11-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DOE78_10970 88992904bbfd5dc5b75d228a1578e1b2 422 SUPERFAMILY SSF81296 113 160 1.06E-6 T 01-11-2018 IPR014756 Immunoglobulin E-set DOE78_09855 b29324661c47d75af14f8bf25b11f76e 210 Pfam PF01527 Transposase 24 74 6.1E-6 T 01-11-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DOE78_09855 b29324661c47d75af14f8bf25b11f76e 210 SUPERFAMILY SSF48295 24 80 2.98E-12 T 01-11-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DOE78_09855 b29324661c47d75af14f8bf25b11f76e 210 SUPERFAMILY SSF46689 83 187 4.12E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_09855 b29324661c47d75af14f8bf25b11f76e 210 Pfam PF13518 Helix-turn-helix domain 88 140 5.4E-6 T 01-11-2018 DOE78_24040 7a7143b49e177dbf919cc0c93da587fc 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 31.407 T 01-11-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24040 7a7143b49e177dbf919cc0c93da587fc 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.9E-60 T 01-11-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24040 7a7143b49e177dbf919cc0c93da587fc 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.2E-61 T 01-11-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24040 7a7143b49e177dbf919cc0c93da587fc 155 Gene3D G3DSA:3.40.50.960 3 155 1.6E-66 T 01-11-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_24040 7a7143b49e177dbf919cc0c93da587fc 155 SUPERFAMILY SSF52121 5 153 9.68E-64 T 01-11-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DOE78_02575 554b7d20a546d3a40769c27c09205676 437 Gene3D G3DSA:3.40.190.10 153 388 8.0E-65 T 01-11-2018 DOE78_02575 554b7d20a546d3a40769c27c09205676 437 SUPERFAMILY SSF53850 22 434 1.58E-60 T 01-11-2018 DOE78_02575 554b7d20a546d3a40769c27c09205676 437 Gene3D G3DSA:3.40.190.10 68 373 8.0E-65 T 01-11-2018 DOE78_02575 554b7d20a546d3a40769c27c09205676 437 Pfam PF13416 Bacterial extracellular solute-binding protein 59 369 1.1E-24 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 Gene3D G3DSA:1.10.10.10 124 236 1.7E-36 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 SMART SM00862 156 232 4.2E-30 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 2.4E-30 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 SUPERFAMILY SSF52172 2 132 1.37E-43 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 SMART SM00448 3 114 1.0E-46 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-39 T 01-11-2018 DOE78_18435 cf87241a08b4cb25af6d78d959c086ec 238 SUPERFAMILY SSF46894 133 233 2.76E-32 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 Gene3D G3DSA:3.40.50.720 1 239 4.5E-67 T 01-11-2018 DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.1E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.1E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.1E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.1E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-35 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.3E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.3E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.3E-5 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 238 1.6E-47 T 01-11-2018 DOE78_08525 2f033edba244d77bffa55dfaa58c660c 240 SUPERFAMILY SSF51735 2 239 1.3E-68 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_01060 cc20a2d6e3291bed5191ab8f09636b1a 159 SUPERFAMILY SSF75169 5 157 8.01E-24 T 01-11-2018 IPR027396 DsrEFH-like DOE78_01060 cc20a2d6e3291bed5191ab8f09636b1a 159 Gene3D G3DSA:3.40.1260.10 1 159 1.5E-67 T 01-11-2018 IPR027396 DsrEFH-like DOE78_01060 cc20a2d6e3291bed5191ab8f09636b1a 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 158 2.5E-68 T 01-11-2018 IPR032836 DsrE2-like family DOE78_09645 78667613b5360d7f6a349057797a0612 167 Gene3D G3DSA:3.40.50.300 2 167 2.2E-14 T 01-11-2018 DOE78_09645 78667613b5360d7f6a349057797a0612 167 SUPERFAMILY SSF52540 11 146 7.27E-14 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21120 5547776dbcbe9f984ccb1170c440c9a1 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 2.6E-75 T 01-11-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DOE78_21120 5547776dbcbe9f984ccb1170c440c9a1 465 SUPERFAMILY SSF101960 32 462 5.75E-140 T 01-11-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOE78_21120 5547776dbcbe9f984ccb1170c440c9a1 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 4.9E-232 T 01-11-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 DOE78_08680 44ab9cb7032b8bbf31626726cae01f58 226 SMART SM00857 3 149 3.3E-35 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DOE78_08680 44ab9cb7032b8bbf31626726cae01f58 226 Pfam PF00239 Resolvase, N terminal domain 3 147 3.9E-26 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DOE78_08680 44ab9cb7032b8bbf31626726cae01f58 226 Gene3D G3DSA:3.40.50.1390 1 157 1.0E-28 T 01-11-2018 DOE78_08680 44ab9cb7032b8bbf31626726cae01f58 226 SUPERFAMILY SSF53041 1 148 2.35E-26 T 01-11-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DOE78_20585 8ee11678d8be3d14f72cbf013bdf459a 335 PIRSF PIRSF001555 7 335 1.2E-156 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DOE78_20585 8ee11678d8be3d14f72cbf013bdf459a 335 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 17 327 1.8E-113 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DOE78_20585 8ee11678d8be3d14f72cbf013bdf459a 335 SUPERFAMILY SSF55681 15 328 3.98E-90 T 01-11-2018 DOE78_20585 8ee11678d8be3d14f72cbf013bdf459a 335 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 11 331 49.178 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DOE78_20585 8ee11678d8be3d14f72cbf013bdf459a 335 Gene3D G3DSA:3.30.930.10 11 331 1.0E-142 T 01-11-2018 DOE78_20585 8ee11678d8be3d14f72cbf013bdf459a 335 Pfam PF03590 Aspartate-ammonia ligase 19 245 7.9E-105 T 01-11-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DOE78_05130 350d3ae8ffdfedd7dbc663e5aa4f45ec 114 SUPERFAMILY SSF101697 3 106 2.35E-47 T 01-11-2018 IPR036289 Hypothetical protein YfhH DOE78_05130 350d3ae8ffdfedd7dbc663e5aa4f45ec 114 Pfam PF08838 Protein of unknown function (DUF1811) 5 103 6.2E-46 T 01-11-2018 IPR014938 Protein of unknown function DUF1811 DOE78_05130 350d3ae8ffdfedd7dbc663e5aa4f45ec 114 Gene3D G3DSA:1.10.287.880 1 52 1.9E-25 T 01-11-2018 DOE78_05130 350d3ae8ffdfedd7dbc663e5aa4f45ec 114 Gene3D G3DSA:2.30.30.340 53 111 1.4E-28 T 01-11-2018 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 SUPERFAMILY SSF56300 4 317 5.28E-84 T 01-11-2018 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 Pfam PF02872 5'-nucleotidase, C-terminal domain 319 489 2.4E-31 T 01-11-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 Gene3D G3DSA:3.60.21.10 7 317 1.6E-90 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 ProSitePatterns PS00786 5'-nucleotidase signature 2. 91 102 - T 01-11-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 Pfam PF00149 Calcineurin-like phosphoesterase 10 243 2.0E-12 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 PRINTS PR01607 Apyrase family signature 226 249 1.1E-27 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 PRINTS PR01607 Apyrase family signature 463 482 1.1E-27 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 PRINTS PR01607 Apyrase family signature 7 25 1.1E-27 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 PRINTS PR01607 Apyrase family signature 191 208 1.1E-27 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 PRINTS PR01607 Apyrase family signature 252 272 1.1E-27 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 PRINTS PR01607 Apyrase family signature 373 396 1.1E-27 T 01-11-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 SUPERFAMILY SSF55816 315 526 1.7E-52 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_03825 7132da435fa51c4e46e9da5f40e4e371 528 Gene3D G3DSA:3.90.780.10 319 527 3.7E-70 T 01-11-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DOE78_02505 e2894702e7a1bb9d6dec7c6438d87eb5 108 Pfam PF05336 L-rhamnose mutarotase 6 107 4.2E-22 T 01-11-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 DOE78_02505 e2894702e7a1bb9d6dec7c6438d87eb5 108 Gene3D G3DSA:3.30.70.100 5 98 1.4E-17 T 01-11-2018 DOE78_02505 e2894702e7a1bb9d6dec7c6438d87eb5 108 SUPERFAMILY SSF54909 6 107 1.47E-24 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_24455 ab7a916b9016c2607015a3db1fc091d1 232 SUPERFAMILY SSF52172 1 121 6.12E-25 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_24455 ab7a916b9016c2607015a3db1fc091d1 232 Pfam PF04397 LytTr DNA-binding domain 135 230 2.1E-20 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_24455 ab7a916b9016c2607015a3db1fc091d1 232 SMART SM00850 134 232 9.2E-22 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_24455 ab7a916b9016c2607015a3db1fc091d1 232 Pfam PF00072 Response regulator receiver domain 5 112 3.1E-20 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_24455 ab7a916b9016c2607015a3db1fc091d1 232 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-25 T 01-11-2018 DOE78_24455 ab7a916b9016c2607015a3db1fc091d1 232 SMART SM00448 1 112 1.2E-18 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_24455 ab7a916b9016c2607015a3db1fc091d1 232 Gene3D G3DSA:2.40.50.40 126 194 4.0E-16 T 01-11-2018 DOE78_14975 0206c9ca7be92d7ec8f7f169e953ba02 100 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 14 86 4.0E-13 T 01-11-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DOE78_14975 0206c9ca7be92d7ec8f7f169e953ba02 100 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 6 97 4.0E-33 T 01-11-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 DOE78_19550 9c370f9c9dabcb1bfc62852e24bf627d 77 Pfam PF01809 Haemolytic domain 3 69 9.1E-31 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor DOE78_19550 9c370f9c9dabcb1bfc62852e24bf627d 77 SMART SM01234 2 69 9.7E-47 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor DOE78_19550 9c370f9c9dabcb1bfc62852e24bf627d 77 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 76 1.4E-33 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor DOE78_19550 9c370f9c9dabcb1bfc62852e24bf627d 77 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 24.936 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor DOE78_19550 9c370f9c9dabcb1bfc62852e24bf627d 77 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 69 2.0E-20 T 01-11-2018 IPR002696 Putative membrane protein insertion efficiency factor DOE78_15335 ea6b37857ebfc77a2ca8d7b238340f3f 310 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 75 216 5.6E-41 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_15335 ea6b37857ebfc77a2ca8d7b238340f3f 310 Gene3D G3DSA:1.10.260.150 53 310 4.4E-72 T 01-11-2018 DOE78_15335 ea6b37857ebfc77a2ca8d7b238340f3f 310 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 75 217 3.4E-30 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_17800 ccd3edee1a86076702c8d73e6eac36f1 304 Gene3D G3DSA:1.20.1510.10 11 213 2.1E-60 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_17800 ccd3edee1a86076702c8d73e6eac36f1 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 295 1.6E-74 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_17800 ccd3edee1a86076702c8d73e6eac36f1 304 SUPERFAMILY SSF160240 218 295 5.49E-18 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DOE78_17800 ccd3edee1a86076702c8d73e6eac36f1 304 SUPERFAMILY SSF161111 7 214 7.98E-53 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_17800 ccd3edee1a86076702c8d73e6eac36f1 304 Pfam PF01545 Cation efflux family 15 210 7.9E-46 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_17800 ccd3edee1a86076702c8d73e6eac36f1 304 Gene3D G3DSA:3.30.70.1350 219 293 3.0E-15 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DOE78_17800 ccd3edee1a86076702c8d73e6eac36f1 304 Pfam PF16916 Dimerisation domain of Zinc Transporter 218 294 2.5E-18 T 01-11-2018 IPR027470 Cation efflux protein, cytoplasmic domain DOE78_11480 cc3bff6b59e9b78cdff97ac9b7076c06 522 SUPERFAMILY SSF52402 16 221 8.82E-25 T 01-11-2018 DOE78_11480 cc3bff6b59e9b78cdff97ac9b7076c06 522 Gene3D G3DSA:3.40.50.620 12 276 1.7E-43 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_11480 cc3bff6b59e9b78cdff97ac9b7076c06 522 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 266 7.1E-13 T 01-11-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DOE78_11480 cc3bff6b59e9b78cdff97ac9b7076c06 522 TIGRFAM TIGR03183 DNA_S_dndC: putative sulfurtransferase DndC 21 518 2.0E-188 T 01-11-2018 IPR017598 Sulphur transferase DndC, putative DOE78_14630 829a10a867f38203e66226f271829e63 245 SUPERFAMILY SSF160467 13 108 1.57E-13 T 01-11-2018 DOE78_14630 829a10a867f38203e66226f271829e63 245 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 16 225 2.8E-55 T 01-11-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DOE78_14630 829a10a867f38203e66226f271829e63 245 Gene3D G3DSA:2.40.100.10 103 242 3.1E-53 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_14630 829a10a867f38203e66226f271829e63 245 SMART SM00796 11 217 1.7E-77 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DOE78_14630 829a10a867f38203e66226f271829e63 245 SUPERFAMILY SSF50891 105 233 5.69E-43 T 01-11-2018 IPR029000 Cyclophilin-like domain superfamily DOE78_14630 829a10a867f38203e66226f271829e63 245 Gene3D G3DSA:3.30.1360.40 7 97 1.1E-18 T 01-11-2018 DOE78_14630 829a10a867f38203e66226f271829e63 245 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 12 216 9.0E-67 T 01-11-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DOE78_05825 51082eb511f66736ab4614d95768ecba 503 Gene3D G3DSA:3.80.30.20 126 489 6.2E-66 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe DOE78_05825 51082eb511f66736ab4614d95768ecba 503 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 90 489 4.9E-148 T 01-11-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ DOE78_05825 51082eb511f66736ab4614d95768ecba 503 SMART SM00729 171 395 1.5E-44 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_05825 51082eb511f66736ab4614d95768ecba 503 Pfam PF04055 Radical SAM superfamily 179 351 9.3E-18 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_05825 51082eb511f66736ab4614d95768ecba 503 SUPERFAMILY SSF102114 162 483 1.57E-67 T 01-11-2018 DOE78_15265 841acf86f299c065c7d083ccc55b4dbf 454 Pfam PF01554 MatE 20 180 5.8E-35 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_15265 841acf86f299c065c7d083ccc55b4dbf 454 Pfam PF01554 MatE 247 407 4.0E-32 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_15265 841acf86f299c065c7d083ccc55b4dbf 454 PIRSF PIRSF006603 1 454 4.3E-72 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_15265 841acf86f299c065c7d083ccc55b4dbf 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 1.2E-104 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_06685 0f62b47208d6b1503d2fb0d8c0c954d2 212 Gene3D G3DSA:3.30.460.10 1 146 3.2E-53 T 01-11-2018 DOE78_06685 0f62b47208d6b1503d2fb0d8c0c954d2 212 SMART SM00954 43 164 2.0E-42 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 DOE78_06685 0f62b47208d6b1503d2fb0d8c0c954d2 212 Gene3D G3DSA:1.10.287.860 147 210 8.4E-28 T 01-11-2018 DOE78_06685 0f62b47208d6b1503d2fb0d8c0c954d2 212 SUPERFAMILY SSF81301 4 199 9.16E-60 T 01-11-2018 DOE78_06685 0f62b47208d6b1503d2fb0d8c0c954d2 212 Pfam PF04607 Region found in RelA / SpoT proteins 43 162 8.6E-38 T 01-11-2018 IPR007685 RelA/SpoT GO:0015969 DOE78_23350 268ee0e737a453830b972c957d8b291a 402 Gene3D G3DSA:2.40.30.170 50 298 4.2E-28 T 01-11-2018 DOE78_23350 268ee0e737a453830b972c957d8b291a 402 Pfam PF13437 HlyD family secretion protein 189 282 5.2E-9 T 01-11-2018 DOE78_23350 268ee0e737a453830b972c957d8b291a 402 Gene3D G3DSA:1.10.287.470 96 189 4.2E-28 T 01-11-2018 DOE78_23350 268ee0e737a453830b972c957d8b291a 402 Gene3D G3DSA:2.40.50.100 61 217 4.2E-28 T 01-11-2018 DOE78_23350 268ee0e737a453830b972c957d8b291a 402 Gene3D G3DSA:2.40.420.20 48 357 4.2E-28 T 01-11-2018 DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 2.9E-19 T 01-11-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 Pfam PF13646 HEAT repeats 300 367 4.0E-11 T 01-11-2018 DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 SMART SM00567 E-Z type HEAT repeats 330 359 3.2E-5 T 01-11-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 SMART SM00567 E-Z type HEAT repeats 298 327 53.0 T 01-11-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 342 2.1E-129 T 01-11-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 SUPERFAMILY SSF48371 264 372 1.1E-11 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 Pfam PF13484 4Fe-4S double cluster binding domain 188 250 8.2E-16 T 01-11-2018 DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 Gene3D G3DSA:1.25.10.10 293 376 1.3E-12 T 01-11-2018 IPR011989 Armadillo-like helical DOE78_05395 fcdcbd6388b35fb3c86ecd7fd08ea12c 376 SUPERFAMILY SSF54862 164 250 1.8E-14 T 01-11-2018 DOE78_09885 771dc043dcf0e3d102c66168b252cfee 132 Gene3D G3DSA:3.40.630.30 3 128 1.8E-25 T 01-11-2018 DOE78_09885 771dc043dcf0e3d102c66168b252cfee 132 SUPERFAMILY SSF55729 14 125 4.15E-19 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09885 771dc043dcf0e3d102c66168b252cfee 132 Pfam PF13673 Acetyltransferase (GNAT) domain 23 124 5.0E-15 T 01-11-2018 IPR000182 GNAT domain DOE78_20700 d0464f7ff53315263349baa4adf41999 177 Pfam PF04264 YceI-like domain 6 173 7.7E-48 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOE78_20700 d0464f7ff53315263349baa4adf41999 177 SMART SM00867 5 174 5.3E-78 T 01-11-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DOE78_20700 d0464f7ff53315263349baa4adf41999 177 Gene3D G3DSA:2.40.128.110 4 177 4.7E-60 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOE78_20700 d0464f7ff53315263349baa4adf41999 177 SUPERFAMILY SSF101874 4 176 6.41E-61 T 01-11-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DOE78_03335 7c1736b512138b2e92f0059c80160150 253 SMART SM00382 26 213 3.1E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03335 7c1736b512138b2e92f0059c80160150 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03335 7c1736b512138b2e92f0059c80160150 253 SUPERFAMILY SSF52540 2 227 9.78E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03335 7c1736b512138b2e92f0059c80160150 253 Gene3D G3DSA:3.40.50.300 1 252 1.2E-67 T 01-11-2018 DOE78_03335 7c1736b512138b2e92f0059c80160150 253 Pfam PF00005 ABC transporter 18 164 4.4E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04325 c19c62805fd1f5dd87478ec0195b5e01 280 SUPERFAMILY SSF161098 5 280 7.19E-71 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04325 c19c62805fd1f5dd87478ec0195b5e01 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 267 1.0E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_04325 c19c62805fd1f5dd87478ec0195b5e01 280 Gene3D G3DSA:1.10.3720.10 1 271 2.7E-68 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 Gene3D G3DSA:3.40.50.2300 159 288 2.9E-87 T 01-11-2018 DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 Gene3D G3DSA:3.40.50.2300 64 307 2.9E-87 T 01-11-2018 DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 Gene3D G3DSA:1.10.260.40 1 58 4.0E-22 T 01-11-2018 DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 Pfam PF13377 Periplasmic binding protein-like domain 167 328 1.5E-39 T 01-11-2018 DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 SUPERFAMILY SSF47413 1 58 2.41E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 SMART SM00354 1 71 4.7E-30 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 SUPERFAMILY SSF53822 60 329 2.55E-91 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 7.5E-18 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_19850 0ce3ba3aa1c3bd9804d113889c0b7f05 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 DOE78_20335 90a3e7c196a9fd9bcf803212f8fed75c 353 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 194 350 2.7E-22 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_20335 90a3e7c196a9fd9bcf803212f8fed75c 353 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 352 1.3E-76 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_20335 90a3e7c196a9fd9bcf803212f8fed75c 353 Gene3D G3DSA:3.30.300.210 211 353 2.4E-11 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_20315 7dcad60053658b3de7623c60f1703f3b 304 SMART SM00382 29 283 9.7E-10 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_20315 7dcad60053658b3de7623c60f1703f3b 304 Pfam PF00005 ABC transporter 20 161 4.7E-29 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_20315 7dcad60053658b3de7623c60f1703f3b 304 SUPERFAMILY SSF52540 3 223 1.28E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20315 7dcad60053658b3de7623c60f1703f3b 304 Gene3D G3DSA:3.40.50.300 2 239 9.3E-63 T 01-11-2018 DOE78_18175 46f7016ec885b0dfceaad03e7da4d979 200 Pfam PF01725 Ham1 family 4 191 8.0E-57 T 01-11-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DOE78_18175 46f7016ec885b0dfceaad03e7da4d979 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 5.9E-63 T 01-11-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DOE78_18175 46f7016ec885b0dfceaad03e7da4d979 200 SUPERFAMILY SSF52972 1 194 3.4E-67 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DOE78_18175 46f7016ec885b0dfceaad03e7da4d979 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 46.691 T 01-11-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DOE78_18175 46f7016ec885b0dfceaad03e7da4d979 200 Gene3D G3DSA:3.90.950.10 1 198 2.3E-74 T 01-11-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DOE78_14380 12801d4c50321a47c4a479cbe197e799 160 Pfam PF04308 Ribonuclease H-like 6 160 5.0E-51 T 01-11-2018 IPR007405 Bacteriophage KVP40, Orf299 DOE78_08195 7d91d54f6831b01a4508945adb12a1a6 402 Gene3D G3DSA:3.30.750.140 254 385 2.0E-12 T 01-11-2018 IPR038610 FliK-like, C-terminal domain superfamily DOE78_08195 7d91d54f6831b01a4508945adb12a1a6 402 Pfam PF02120 Flagellar hook-length control protein FliK 282 359 3.8E-17 T 01-11-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.4E-16 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 Gene3D G3DSA:1.10.10.10 1 58 1.3E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 SUPERFAMILY SSF100950 77 233 3.43E-27 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 SUPERFAMILY SSF46785 4 60 9.22E-15 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-6 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-6 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 SMART SM00420 6 58 6.6E-13 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 SMART SM01134 73 232 4.2E-66 T 01-11-2018 DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 Pfam PF00455 DeoR C terminal sensor domain 77 231 1.0E-50 T 01-11-2018 IPR014036 DeoR C-terminal sensor domain DOE78_06155 ae320d1da0d576f583e29c91c287956a 260 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 01-11-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 Gene3D G3DSA:2.30.30.30 119 177 4.5E-26 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 4.1E-21 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 4.1E-21 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 4.1E-21 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 Gene3D G3DSA:3.30.70.940 1 118 4.4E-46 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 SMART SM00738 2 113 4.3E-53 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 Pfam PF00467 KOW motif 127 158 5.0E-7 T 01-11-2018 IPR005824 KOW DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 Pfam PF02357 Transcription termination factor nusG 3 109 8.8E-29 T 01-11-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 2.5E-68 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 SUPERFAMILY SSF82679 2 114 1.24E-41 T 01-11-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 01-11-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 SUPERFAMILY SSF50104 121 177 6.52E-20 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 30.042 T 01-11-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DOE78_00635 6d9953440a491b51052afd6df96d67cf 177 SMART SM00739 123 150 5.6E-6 T 01-11-2018 IPR005824 KOW DOE78_09570 8b589106724ec4e29025ac797a7e7b84 170 SUPERFAMILY SSF55729 3 166 5.67E-33 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09570 8b589106724ec4e29025ac797a7e7b84 170 Gene3D G3DSA:3.40.630.30 1 166 2.7E-43 T 01-11-2018 DOE78_09570 8b589106724ec4e29025ac797a7e7b84 170 Pfam PF13523 Acetyltransferase (GNAT) domain 15 147 4.9E-27 T 01-11-2018 DOE78_05715 9940f4dd08568c862df7fe7c09c599b0 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 5.4E-6 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_05715 9940f4dd08568c862df7fe7c09c599b0 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 5.4E-6 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_05715 9940f4dd08568c862df7fe7c09c599b0 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 5.4E-6 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_05715 9940f4dd08568c862df7fe7c09c599b0 152 SUPERFAMILY SSF46955 12 120 1.58E-22 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_05715 9940f4dd08568c862df7fe7c09c599b0 152 SMART SM00422 12 80 4.8E-23 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_05715 9940f4dd08568c862df7fe7c09c599b0 152 Gene3D G3DSA:1.10.1660.10 3 123 6.5E-25 T 01-11-2018 DOE78_05715 9940f4dd08568c862df7fe7c09c599b0 152 Pfam PF13411 MerR HTH family regulatory protein 12 78 5.3E-17 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_19495 a640f0b17c4dd25a40f1a380c84887ff 255 SUPERFAMILY SSF52540 4 219 1.3E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19495 a640f0b17c4dd25a40f1a380c84887ff 255 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_19495 a640f0b17c4dd25a40f1a380c84887ff 255 SMART SM00382 32 211 9.0E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_19495 a640f0b17c4dd25a40f1a380c84887ff 255 Pfam PF00005 ABC transporter 23 162 1.3E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_19495 a640f0b17c4dd25a40f1a380c84887ff 255 Gene3D G3DSA:3.40.50.300 1 254 2.4E-63 T 01-11-2018 DOE78_16555 29aaf371ffcadf717b5fde04273319b8 112 SUPERFAMILY SSF89360 1 106 2.88E-27 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DOE78_16555 29aaf371ffcadf717b5fde04273319b8 112 Gene3D G3DSA:2.60.300.12 1 102 1.7E-7 T 01-11-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DOE78_16555 29aaf371ffcadf717b5fde04273319b8 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 105 4.5E-26 T 01-11-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DOE78_01330 c108ed085443b3474278542626e11204 386 Gene3D G3DSA:2.40.37.10 9 367 2.3E-129 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DOE78_01330 c108ed085443b3474278542626e11204 386 TIGRFAM TIGR00492 alr: alanine racemase 6 368 3.2E-124 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 01-11-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 SMART SM01005 244 369 1.7E-63 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 SUPERFAMILY SSF50621 239 378 6.28E-49 T 01-11-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 260 275 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 277 292 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 67 85 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 162 173 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 351 364 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 127 139 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 297 314 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 31 47 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 PRINTS PR00992 Alanine racemase signature 202 229 9.1E-71 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 Pfam PF00842 Alanine racemase, C-terminal domain 245 368 4.4E-44 T 01-11-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 Pfam PF01168 Alanine racemase, N-terminal domain 12 229 2.0E-64 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 Hamap MF_01201 Alanine racemase. 5 369 34.783 T 01-11-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_01330 c108ed085443b3474278542626e11204 386 Gene3D G3DSA:3.20.20.10 14 224 2.3E-129 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_01330 c108ed085443b3474278542626e11204 386 SUPERFAMILY SSF51419 12 238 1.13E-63 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 Gene3D G3DSA:3.30.420.40 8 321 2.2E-123 T 01-11-2018 DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 Gene3D G3DSA:3.30.420.40 133 299 2.2E-123 T 01-11-2018 DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 6 337 63.408 T 01-11-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 81 101 6.6E-50 T 01-11-2018 IPR017861 Kae1/TsaD family DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 102 121 6.6E-50 T 01-11-2018 IPR017861 Kae1/TsaD family DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 6.6E-50 T 01-11-2018 IPR017861 Kae1/TsaD family DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 9 22 6.6E-50 T 01-11-2018 IPR017861 Kae1/TsaD family DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 6.6E-50 T 01-11-2018 IPR017861 Kae1/TsaD family DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 6.6E-50 T 01-11-2018 IPR017861 Kae1/TsaD family DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 Pfam PF00814 Glycoprotease family 28 312 2.2E-104 T 01-11-2018 IPR000905 Gcp-like domain DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 SUPERFAMILY SSF53067 106 314 2.09E-43 T 01-11-2018 DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 8 319 4.6E-133 T 01-11-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 ProSitePatterns PS01016 Glycoprotease family signature. 101 121 - T 01-11-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 9 312 3.8E-108 T 01-11-2018 IPR017861 Kae1/TsaD family DOE78_01495 87af95af72cd78395ae89218ea6b2fda 342 SUPERFAMILY SSF53067 7 127 3.5E-32 T 01-11-2018 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 272 1.6E-61 T 01-11-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 274 2.0E-99 T 01-11-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 SUPERFAMILY SSF54675 3 108 3.22E-25 T 01-11-2018 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 Gene3D G3DSA:3.20.20.70 123 265 1.1E-101 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 PIRSF PIRSF006250 1 278 5.5E-96 T 01-11-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 107 9.2E-23 T 01-11-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 Gene3D G3DSA:3.90.1170.20 11 272 1.1E-101 T 01-11-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 DOE78_17885 eb6c803fb3723857ba0f37df0e0dc2a8 278 SUPERFAMILY SSF51690 109 274 5.89E-59 T 01-11-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DOE78_18685 f5a8b1ae7719fe717c2f3c57be1c69bd 397 Gene3D G3DSA:3.90.1150.10 262 397 1.3E-51 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_18685 f5a8b1ae7719fe717c2f3c57be1c69bd 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 392 4.0E-144 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_18685 f5a8b1ae7719fe717c2f3c57be1c69bd 397 PIRSF PIRSF001434 1 396 1.4E-146 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_18685 f5a8b1ae7719fe717c2f3c57be1c69bd 397 Gene3D G3DSA:3.40.640.10 5 258 2.9E-93 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_18685 f5a8b1ae7719fe717c2f3c57be1c69bd 397 SUPERFAMILY SSF53383 29 394 1.36E-120 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_18685 f5a8b1ae7719fe717c2f3c57be1c69bd 397 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 9 395 4.1E-183 T 01-11-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 DOE78_18685 f5a8b1ae7719fe717c2f3c57be1c69bd 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_12835 8307589d237e7a8b5fce57781358153b 459 SUPERFAMILY SSF52317 244 455 2.81E-33 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_12835 8307589d237e7a8b5fce57781358153b 459 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 3 439 46.379 T 01-11-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 DOE78_12835 8307589d237e7a8b5fce57781358153b 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 5 445 1.3E-147 T 01-11-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 DOE78_12835 8307589d237e7a8b5fce57781358153b 459 Gene3D G3DSA:3.40.50.300 4 190 6.7E-23 T 01-11-2018 DOE78_12835 8307589d237e7a8b5fce57781358153b 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 249 437 1.1E-39 T 01-11-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DOE78_12835 8307589d237e7a8b5fce57781358153b 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 192 6.7E-21 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOE78_12835 8307589d237e7a8b5fce57781358153b 459 SUPERFAMILY SSF52540 1 196 1.37E-44 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12835 8307589d237e7a8b5fce57781358153b 459 Gene3D G3DSA:3.40.50.880 250 410 3.8E-11 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 SMART SM00363 2 59 3.3E-16 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 Gene3D G3DSA:3.30.70.1560 128 215 3.8E-30 T 01-11-2018 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 Gene3D G3DSA:3.30.70.580 59 127 3.6E-28 T 01-11-2018 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 Pfam PF00849 RNA pseudouridylate synthase 62 196 3.2E-24 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 4.7E-55 T 01-11-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 01-11-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 Gene3D G3DSA:3.10.290.10 1 58 9.4E-23 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 SUPERFAMILY SSF55120 46 235 1.13E-46 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 SUPERFAMILY SSF55174 2 67 1.16E-17 T 01-11-2018 DOE78_16335 c8e281c681fb34497851abb008dbf59f 240 Pfam PF01479 S4 domain 2 48 6.7E-17 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 SMART SM01350 177 467 2.7E-194 T 01-11-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 01-11-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 Gene3D G3DSA:3.40.50.720 1 178 1.5E-55 T 01-11-2018 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 3.2E-221 T 01-11-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 166 194 2.0E-79 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 65 94 2.0E-79 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 2.0E-79 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 118 143 2.0E-79 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 2.0E-79 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 2.0E-79 T 01-11-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 177 466 9.8E-124 T 01-11-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 SUPERFAMILY SSF51735 4 175 2.72E-52 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 170 2.4E-50 T 01-11-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 SUPERFAMILY SSF48179 175 466 5.44E-121 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 Gene3D G3DSA:1.10.1040.10 179 434 3.1E-101 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 PIRSF PIRSF000109 1 467 1.1E-223 T 01-11-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DOE78_03830 776904660fbeed8ceeb4e4a046222be1 467 Gene3D G3DSA:1.20.5.320 436 467 1.2E-17 T 01-11-2018 DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 4 81 3.0E-16 T 01-11-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 82 23.854 T 01-11-2018 IPR023460 Ribosomal protein L7Ae, putative DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 SUPERFAMILY SSF55315 4 81 1.12E-21 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 PRINTS PR00884 Ribosomal protein HS6 signature 70 82 1.7E-6 T 01-11-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 PRINTS PR00884 Ribosomal protein HS6 signature 30 41 1.7E-6 T 01-11-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 PRINTS PR00884 Ribosomal protein HS6 signature 20 30 1.7E-6 T 01-11-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 PRINTS PR00884 Ribosomal protein HS6 signature 56 66 1.7E-6 T 01-11-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00675 c0db883121d7d0b58d98eb715c10134a 82 Gene3D G3DSA:3.30.1330.30 1 81 7.6E-25 T 01-11-2018 IPR029064 50S ribosomal protein L30e-like DOE78_22645 4ab538e0b0aa12c3cc0327b6b819697b 299 SUPERFAMILY SSF161098 64 290 1.18E-55 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_22645 4ab538e0b0aa12c3cc0327b6b819697b 299 SUPERFAMILY SSF160964 23 52 1.83E-6 T 01-11-2018 DOE78_22645 4ab538e0b0aa12c3cc0327b6b819697b 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 293 8.0E-16 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_22645 4ab538e0b0aa12c3cc0327b6b819697b 299 Gene3D G3DSA:1.10.3720.10 60 299 5.8E-66 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_07740 e91f0bf315f6a68359df850d34e203ee 242 Pfam PF05949 Bacterial protein of unknown function (DUF881) 85 232 1.2E-26 T 01-11-2018 IPR010273 Protein of unknown function DUF881 DOE78_07740 e91f0bf315f6a68359df850d34e203ee 242 Gene3D G3DSA:3.30.70.1880 83 241 1.1E-12 T 01-11-2018 DOE78_12960 4d0e1086c70f0e4436aebe0f76bf4103 310 SUPERFAMILY SSF51735 98 275 1.42E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_12960 4d0e1086c70f0e4436aebe0f76bf4103 310 Gene3D G3DSA:3.40.50.720 40 302 3.1E-75 T 01-11-2018 DOE78_12960 4d0e1086c70f0e4436aebe0f76bf4103 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 275 2.4E-44 T 01-11-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DOE78_12960 4d0e1086c70f0e4436aebe0f76bf4103 310 Gene3D G3DSA:3.40.50.720 96 279 3.1E-75 T 01-11-2018 DOE78_12960 4d0e1086c70f0e4436aebe0f76bf4103 310 SUPERFAMILY SSF52283 31 111 2.93E-5 T 01-11-2018 DOE78_15855 fa077ca27bb8b25fe2ee0416b7b80113 156 Gene3D G3DSA:2.60.40.790 11 154 1.4E-27 T 01-11-2018 IPR008978 HSP20-like chaperone DOE78_15855 fa077ca27bb8b25fe2ee0416b7b80113 156 Pfam PF00011 Hsp20/alpha crystallin family 57 150 1.9E-16 T 01-11-2018 IPR002068 Alpha crystallin/Hsp20 domain DOE78_15855 fa077ca27bb8b25fe2ee0416b7b80113 156 SUPERFAMILY SSF49764 27 153 1.9E-25 T 01-11-2018 IPR008978 HSP20-like chaperone DOE78_01000 b4041e80880421d37d6ef8f9b1332a88 56 Pfam PF09388 Spo0E like sporulation regulatory protein 6 46 2.8E-11 T 01-11-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DOE78_01000 b4041e80880421d37d6ef8f9b1332a88 56 Gene3D G3DSA:1.20.58.990 1 56 1.9E-8 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_01000 b4041e80880421d37d6ef8f9b1332a88 56 SUPERFAMILY SSF140500 1 53 8.5E-13 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_22190 972d74202cf9bc1d7b4c3e80accd8fbe 212 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 208 55.937 T 01-11-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DOE78_22190 972d74202cf9bc1d7b4c3e80accd8fbe 212 Gene3D G3DSA:3.40.190.10 6 199 7.1E-79 T 01-11-2018 DOE78_22190 972d74202cf9bc1d7b4c3e80accd8fbe 212 Pfam PF01634 ATP phosphoribosyltransferase 54 203 2.2E-48 T 01-11-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DOE78_22190 972d74202cf9bc1d7b4c3e80accd8fbe 212 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 184 2.1E-60 T 01-11-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DOE78_22190 972d74202cf9bc1d7b4c3e80accd8fbe 212 SUPERFAMILY SSF53850 2 207 2.39E-65 T 01-11-2018 DOE78_22190 972d74202cf9bc1d7b4c3e80accd8fbe 212 Gene3D G3DSA:3.40.190.10 95 176 7.1E-79 T 01-11-2018 DOE78_22190 972d74202cf9bc1d7b4c3e80accd8fbe 212 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 01-11-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 Pfam PF09383 NIL domain 265 330 5.5E-16 T 01-11-2018 IPR018449 NIL domain DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 SMART SM00382 30 224 4.8E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 Pfam PF00005 ABC transporter 21 169 3.8E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 Gene3D G3DSA:3.30.70.260 233 338 1.3E-22 T 01-11-2018 DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 SUPERFAMILY SSF52540 1 240 2.37E-83 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 Gene3D G3DSA:3.40.50.300 1 232 4.6E-73 T 01-11-2018 DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 SMART SM00930 262 337 1.1E-18 T 01-11-2018 IPR018449 NIL domain DOE78_12095 65ee10e125dbf021ae776d4df6b46cb0 340 SUPERFAMILY SSF55021 256 337 8.39E-17 T 01-11-2018 DOE78_08090 dee984501e7475cef4a6bf0a2491e2ec 257 Gene3D G3DSA:3.30.420.10 50 257 3.0E-81 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_08090 dee984501e7475cef4a6bf0a2491e2ec 257 Pfam PF01351 Ribonuclease HII 75 250 1.4E-40 T 01-11-2018 IPR024567 Ribonuclease HII/HIII domain DOE78_08090 dee984501e7475cef4a6bf0a2491e2ec 257 Hamap MF_00052_B Ribonuclease HII [rnhB]. 73 251 37.526 T 01-11-2018 IPR022898 Ribonuclease HII GO:0004523 DOE78_08090 dee984501e7475cef4a6bf0a2491e2ec 257 SUPERFAMILY SSF53098 62 254 2.88E-70 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_00875 4558c0a68e2ec33cfa09ff84b68f3756 288 Gene3D G3DSA:3.40.50.300 1 286 8.2E-75 T 01-11-2018 DOE78_00875 4558c0a68e2ec33cfa09ff84b68f3756 288 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_00875 4558c0a68e2ec33cfa09ff84b68f3756 288 Pfam PF00005 ABC transporter 25 174 7.8E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_00875 4558c0a68e2ec33cfa09ff84b68f3756 288 SUPERFAMILY SSF52540 4 240 4.35E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00875 4558c0a68e2ec33cfa09ff84b68f3756 288 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 280 9.7E-121 T 01-11-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 DOE78_00875 4558c0a68e2ec33cfa09ff84b68f3756 288 SMART SM00382 32 223 4.0E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_06740 cb8d2923437c016fbe474133a031fbd5 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 5 113 3.0E-40 T 01-11-2018 IPR005562 SpoVA DOE78_06740 cb8d2923437c016fbe474133a031fbd5 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 5 118 3.1E-50 T 01-11-2018 IPR014204 Sporulation stage V, protein AE DOE78_04885 c592023f2cc802a0be95eb0d4bedfe83 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 110 3.1E-52 T 01-11-2018 IPR004624 PhnA protein DOE78_04885 c592023f2cc802a0be95eb0d4bedfe83 111 Gene3D G3DSA:2.20.25.10 1 41 7.8E-20 T 01-11-2018 DOE78_04885 c592023f2cc802a0be95eb0d4bedfe83 111 Gene3D G3DSA:2.30.30.40 42 111 1.3E-36 T 01-11-2018 DOE78_04885 c592023f2cc802a0be95eb0d4bedfe83 111 SUPERFAMILY SSF57783 3 35 5.61E-15 T 01-11-2018 DOE78_04885 c592023f2cc802a0be95eb0d4bedfe83 111 Pfam PF08274 PhnA Zinc-Ribbon 4 32 8.5E-17 T 01-11-2018 IPR013987 PhnA protein, N-terminal DOE78_04885 c592023f2cc802a0be95eb0d4bedfe83 111 SUPERFAMILY SSF82057 39 111 6.41E-30 T 01-11-2018 DOE78_04885 c592023f2cc802a0be95eb0d4bedfe83 111 Pfam PF03831 PhnA domain 44 111 4.2E-35 T 01-11-2018 IPR013988 PhnA protein, C-terminal DOE78_09910 750bfdaa58c31b705380528e6b10edc9 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 36 129 2.6E-17 T 01-11-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DOE78_09910 750bfdaa58c31b705380528e6b10edc9 211 Gene3D G3DSA:2.30.110.10 26 154 4.5E-27 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 DOE78_09910 750bfdaa58c31b705380528e6b10edc9 211 SUPERFAMILY SSF50475 36 148 7.46E-19 T 01-11-2018 DOE78_09910 750bfdaa58c31b705380528e6b10edc9 211 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 14 211 1.4E-79 T 01-11-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent DOE78_24310 f57c89ad767a87e07138d084dc064f34 227 Gene3D G3DSA:1.10.10.10 121 222 3.7E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_24310 f57c89ad767a87e07138d084dc064f34 227 Pfam PF00072 Response regulator receiver domain 4 111 2.8E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_24310 f57c89ad767a87e07138d084dc064f34 227 SUPERFAMILY SSF52172 2 174 1.51E-37 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_24310 f57c89ad767a87e07138d084dc064f34 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.5E-21 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_24310 f57c89ad767a87e07138d084dc064f34 227 Gene3D G3DSA:3.40.50.2300 1 120 9.3E-35 T 01-11-2018 DOE78_24310 f57c89ad767a87e07138d084dc064f34 227 SMART SM00862 145 220 4.1E-19 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_24310 f57c89ad767a87e07138d084dc064f34 227 SMART SM00448 1 111 7.9E-41 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 PRINTS PR01703 Manganese superoxide dismutase signature 160 173 5.9E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 PRINTS PR01703 Manganese superoxide dismutase signature 251 263 5.9E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 PRINTS PR01703 Manganese superoxide dismutase signature 213 221 5.9E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 PRINTS PR01703 Manganese superoxide dismutase signature 121 134 5.9E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 PRINTS PR01703 Manganese superoxide dismutase signature 100 111 5.9E-22 T 01-11-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 SUPERFAMILY SSF46609 96 182 3.4E-33 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 SUPERFAMILY SSF54719 176 290 3.4E-43 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 Gene3D G3DSA:1.10.287.990 114 176 5.7E-26 T 01-11-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 97 177 2.9E-29 T 01-11-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 253 260 - T 01-11-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 Gene3D G3DSA:2.40.500.20 177 296 1.4E-45 T 01-11-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_16355 c88d1bf55aac249123a7b15e42c65135 298 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 184 286 2.5E-37 T 01-11-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 Pfam PF01386 Ribosomal L25p family 5 91 1.8E-20 T 01-11-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 Gene3D G3DSA:2.40.240.10 3 94 2.0E-24 T 01-11-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 182 1.0E-24 T 01-11-2018 IPR020057 Ribosomal protein L25, beta domain DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 182 25.068 T 01-11-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 Gene3D G3DSA:2.170.120.20 97 189 1.4E-26 T 01-11-2018 IPR037121 Ribosomal protein L25, C-terminal DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 SUPERFAMILY SSF50715 3 186 1.92E-51 T 01-11-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 91 3.0E-19 T 01-11-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DOE78_00315 bf1ab6797d11821b8bd500ba60cae47c 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 5 179 6.5E-51 T 01-11-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DOE78_18285 8f34662ee04ee117fed13c3946341e13 175 Pfam PF02674 Colicin V production protein 3 163 1.0E-34 T 01-11-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DOE78_12935 9a89531abbb3313cc9aa0ac744057881 244 Gene3D G3DSA:3.40.50.1110 18 244 6.6E-28 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_12935 9a89531abbb3313cc9aa0ac744057881 244 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 36 232 3.1E-23 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain DOE78_12935 9a89531abbb3313cc9aa0ac744057881 244 SUPERFAMILY SSF52266 31 242 1.04E-28 T 01-11-2018 DOE78_19170 1cd3eebb45a8750f6b630b28c0336cb6 572 Gene3D G3DSA:3.40.50.12780 17 455 3.1E-121 T 01-11-2018 DOE78_19170 1cd3eebb45a8750f6b630b28c0336cb6 572 SUPERFAMILY SSF56801 19 562 2.49E-161 T 01-11-2018 DOE78_19170 1cd3eebb45a8750f6b630b28c0336cb6 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 3.5E-26 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_19170 1cd3eebb45a8750f6b630b28c0336cb6 572 Pfam PF00501 AMP-binding enzyme 51 462 2.0E-91 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_19170 1cd3eebb45a8750f6b630b28c0336cb6 572 Gene3D G3DSA:3.30.300.310 458 561 2.0E-28 T 01-11-2018 DOE78_19170 1cd3eebb45a8750f6b630b28c0336cb6 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_09875 4c85b17c9488b2e0fc972959c2445011 206 Pfam PF00293 NUDIX domain 38 151 1.6E-6 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_09875 4c85b17c9488b2e0fc972959c2445011 206 SUPERFAMILY SSF55811 4 159 1.35E-23 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_09875 4c85b17c9488b2e0fc972959c2445011 206 Gene3D G3DSA:3.90.79.10 1 205 5.0E-37 T 01-11-2018 DOE78_13515 ea55e53310e05edd5d35537d75e68e57 378 SMART SM00854 55 300 2.2E-88 T 01-11-2018 IPR019079 Capsule synthesis protein, CapA DOE78_13515 ea55e53310e05edd5d35537d75e68e57 378 Gene3D G3DSA:3.60.21.10 127 298 4.4E-7 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_13515 ea55e53310e05edd5d35537d75e68e57 378 SUPERFAMILY SSF56300 54 300 7.17E-40 T 01-11-2018 DOE78_13515 ea55e53310e05edd5d35537d75e68e57 378 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 55 300 1.3E-73 T 01-11-2018 IPR019079 Capsule synthesis protein, CapA DOE78_19990 33fc670e96ca37d1620efd4cf54c06bc 329 SMART SM00861 6 181 1.9E-67 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_19990 33fc670e96ca37d1620efd4cf54c06bc 329 Pfam PF02780 Transketolase, C-terminal domain 195 318 9.1E-45 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_19990 33fc670e96ca37d1620efd4cf54c06bc 329 SUPERFAMILY SSF52922 192 326 2.36E-45 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_19990 33fc670e96ca37d1620efd4cf54c06bc 329 Gene3D G3DSA:3.40.50.970 3 195 1.9E-88 T 01-11-2018 DOE78_19990 33fc670e96ca37d1620efd4cf54c06bc 329 Gene3D G3DSA:3.40.50.920 196 327 2.6E-50 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_19990 33fc670e96ca37d1620efd4cf54c06bc 329 SUPERFAMILY SSF52518 4 205 3.93E-71 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_19990 33fc670e96ca37d1620efd4cf54c06bc 329 Pfam PF02779 Transketolase, pyrimidine binding domain 5 180 6.4E-52 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_16410 541317339df51e67c7ab3c9732879d7b 206 Gene3D G3DSA:2.60.480.10 1 93 3.1E-10 T 01-11-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily DOE78_16410 541317339df51e67c7ab3c9732879d7b 206 Pfam PF12164 Stage V sporulation protein AA 3 88 7.9E-19 T 01-11-2018 IPR021997 Stage V sporulation protein AA DOE78_19335 52e668f6be3a4a7037ed5d905c63e65c 308 Gene3D G3DSA:3.40.50.1100 45 144 1.9E-118 T 01-11-2018 DOE78_19335 52e668f6be3a4a7037ed5d905c63e65c 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 307 2.9E-126 T 01-11-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DOE78_19335 52e668f6be3a4a7037ed5d905c63e65c 308 Gene3D G3DSA:3.40.50.1100 6 303 1.9E-118 T 01-11-2018 DOE78_19335 52e668f6be3a4a7037ed5d905c63e65c 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 307 2.7E-134 T 01-11-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DOE78_19335 52e668f6be3a4a7037ed5d905c63e65c 308 SUPERFAMILY SSF53686 1 306 7.99E-99 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE78_19335 52e668f6be3a4a7037ed5d905c63e65c 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 296 5.8E-69 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DOE78_19335 52e668f6be3a4a7037ed5d905c63e65c 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 01-11-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DOE78_03340 63030897a35f1189d846c2360803d2b4 319 Pfam PF01497 Periplasmic binding protein 62 294 8.3E-31 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain DOE78_03340 63030897a35f1189d846c2360803d2b4 319 Gene3D G3DSA:3.40.50.1980 53 310 1.4E-94 T 01-11-2018 DOE78_03340 63030897a35f1189d846c2360803d2b4 319 Gene3D G3DSA:3.40.50.12260 190 294 1.4E-94 T 01-11-2018 DOE78_03340 63030897a35f1189d846c2360803d2b4 319 SUPERFAMILY SSF53807 43 304 3.38E-65 T 01-11-2018 DOE78_23960 40fda0248777fba3446b816dd9637843 251 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 2 77 1.1E-43 T 01-11-2018 IPR014243 Transcription factor, RsfA DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 Pfam PF00288 GHMP kinases N terminal domain 86 144 9.5E-14 T 01-11-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 35.917 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 285 1.9E-108 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 SUPERFAMILY SSF55060 162 281 2.34E-31 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 PIRSF PIRSF010376 2 288 5.1E-97 T 01-11-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 Gene3D G3DSA:3.30.70.890 161 284 1.3E-28 T 01-11-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 Gene3D G3DSA:3.30.230.10 1 159 7.4E-61 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 Pfam PF08544 GHMP kinases C terminal 197 265 1.6E-9 T 01-11-2018 IPR013750 GHMP kinase, C-terminal domain DOE78_00285 e8cee727751409eaea7ddd382a3a10eb 289 SUPERFAMILY SSF54211 3 157 4.02E-48 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_02720 1ef731abb811246712aae5461d9413d1 326 Gene3D G3DSA:3.20.20.100 1 323 3.5E-123 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_02720 1ef731abb811246712aae5461d9413d1 326 SUPERFAMILY SSF51430 1 323 3.01E-107 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_02720 1ef731abb811246712aae5461d9413d1 326 Pfam PF00248 Aldo/keto reductase family 15 315 8.5E-80 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain DOE78_02720 1ef731abb811246712aae5461d9413d1 326 PRINTS PR00069 Aldo-keto reductase signature 250 274 2.2E-8 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_02720 1ef731abb811246712aae5461d9413d1 326 PRINTS PR00069 Aldo-keto reductase signature 113 131 2.2E-8 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_02720 1ef731abb811246712aae5461d9413d1 326 PRINTS PR00069 Aldo-keto reductase signature 170 187 2.2E-8 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_02720 1ef731abb811246712aae5461d9413d1 326 PRINTS PR00069 Aldo-keto reductase signature 47 71 2.2E-8 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_05020 90d5f7b65486e33c27302054026e4c67 462 Pfam PF07670 Nucleoside recognition 149 245 2.4E-7 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 SUPERFAMILY SSF55920 3 247 2.75E-66 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 Pfam PF00557 Metallopeptidase family M24 12 239 1.2E-43 T 01-11-2018 IPR000994 Peptidase M24 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.7E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.7E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 1.7E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.7E-18 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 Gene3D G3DSA:3.90.230.10 1 247 1.5E-80 T 01-11-2018 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 246 2.5E-81 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_10330 2f2a60093ac25d432a4828d235b9cf82 247 Hamap MF_01974 Methionine aminopeptidase [map]. 1 247 32.503 T 01-11-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_03905 40e1d455afb2eb9c9e43224db947d014 421 Pfam PF04346 Ethanolamine utilisation protein, EutH 5 385 1.5E-127 T 01-11-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 DOE78_03905 40e1d455afb2eb9c9e43224db947d014 421 PIRSF PIRSF019466 2 407 2.2E-130 T 01-11-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 DOE78_23830 9a05fdc778c8af45040bae1701617afd 123 SUPERFAMILY SSF52172 4 119 2.85E-38 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_23830 9a05fdc778c8af45040bae1701617afd 123 Gene3D G3DSA:3.40.50.2300 1 123 6.6E-44 T 01-11-2018 DOE78_23830 9a05fdc778c8af45040bae1701617afd 123 SMART SM00448 3 114 3.4E-34 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_23830 9a05fdc778c8af45040bae1701617afd 123 Pfam PF00072 Response regulator receiver domain 5 115 1.5E-30 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 SMART SM01134 73 233 2.1E-70 T 01-11-2018 DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 Pfam PF00455 DeoR C terminal sensor domain 75 232 7.4E-54 T 01-11-2018 IPR014036 DeoR C-terminal sensor domain DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 Gene3D G3DSA:1.10.10.10 2 56 4.9E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 SUPERFAMILY SSF46785 5 70 1.0E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.1E-17 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 SMART SM00420 6 58 5.6E-23 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.8E-10 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.8E-10 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 SUPERFAMILY SSF100950 76 233 6.07E-34 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_02650 f76538a2e811c673e1a991d711c1f775 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 01-11-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DOE78_02880 96d8e29f7c3b545899235986c6ec6e1c 156 Pfam PF00258 Flavodoxin 12 115 1.1E-18 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DOE78_02880 96d8e29f7c3b545899235986c6ec6e1c 156 SUPERFAMILY SSF52218 6 116 5.43E-28 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_02880 96d8e29f7c3b545899235986c6ec6e1c 156 Gene3D G3DSA:3.40.50.360 8 150 1.8E-26 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_12865 7528c9407e94ce0134ea885d51cb11d7 298 Pfam PF07859 alpha/beta hydrolase fold 63 277 1.1E-18 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DOE78_12865 7528c9407e94ce0134ea885d51cb11d7 298 Gene3D G3DSA:3.40.50.1820 25 297 2.6E-61 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_12865 7528c9407e94ce0134ea885d51cb11d7 298 SUPERFAMILY SSF53474 45 297 5.45E-48 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 Gene3D G3DSA:3.40.50.300 256 490 1.5E-42 T 01-11-2018 DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 SMART SM00382 276 471 2.5E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 SMART SM00382 23 216 8.4E-7 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 Pfam PF00005 ABC transporter 268 423 2.2E-19 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 SUPERFAMILY SSF52540 2 226 2.5E-53 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 SUPERFAMILY SSF52540 247 477 1.4E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 Gene3D G3DSA:3.40.50.300 1 255 2.3E-54 T 01-11-2018 DOE78_21850 f4c6ba323514ddfe253098242c5c8f70 495 Pfam PF00005 ABC transporter 14 168 7.5E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_17195 331d088eecf1b0c922ef83db8d9d6ed2 171 Gene3D G3DSA:1.10.8.1150 103 171 2.0E-9 T 01-11-2018 DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PIRSF PIRSF000126 4 264 1.1E-53 T 01-11-2018 DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 Pfam PF00106 short chain dehydrogenase 11 198 5.6E-62 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.2E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.2E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.2E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.2E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.2E-30 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 Gene3D G3DSA:3.40.50.720 3 263 1.9E-74 T 01-11-2018 DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 SUPERFAMILY SSF51735 5 257 4.97E-73 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.0E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.0E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_16580 5eb79f6cc780ff8a44d2e52f173a8d43 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.0E-13 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_02585 b210747ea0efbbbeb77d1e64973f1cd2 295 Gene3D G3DSA:1.10.3720.10 17 283 3.1E-52 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02585 b210747ea0efbbbeb77d1e64973f1cd2 295 SUPERFAMILY SSF161098 25 295 2.62E-56 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02585 b210747ea0efbbbeb77d1e64973f1cd2 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 287 1.5E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12400 baa454918113fadf4ec0f4fbca06b3cc 118 Gene3D G3DSA:3.10.450.50 10 118 2.1E-31 T 01-11-2018 DOE78_12400 baa454918113fadf4ec0f4fbca06b3cc 118 SUPERFAMILY SSF54427 10 116 1.15E-21 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_12400 baa454918113fadf4ec0f4fbca06b3cc 118 Pfam PF12680 SnoaL-like domain 15 111 5.7E-10 T 01-11-2018 IPR037401 SnoaL-like domain DOE78_12400 baa454918113fadf4ec0f4fbca06b3cc 118 PIRSF PIRSF030561 9 117 1.2E-30 T 01-11-2018 IPR008317 Uncharacterised conserved protein UCP030561 DOE78_01785 00b7db61485dfc2507cf93624105b0b7 443 Pfam PF00860 Permease family 17 403 1.2E-45 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DOE78_01785 00b7db61485dfc2507cf93624105b0b7 443 PIRSF PIRSF005353 1 443 4.3E-168 T 01-11-2018 IPR026033 Purine permease PbuG-like DOE78_09775 38bf45a42f51322e40b26e99b97dccfc 352 Pfam PF00296 Luciferase-like monooxygenase 2 303 3.3E-48 T 01-11-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DOE78_09775 38bf45a42f51322e40b26e99b97dccfc 352 Gene3D G3DSA:3.20.20.30 1 349 9.1E-88 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_09775 38bf45a42f51322e40b26e99b97dccfc 352 SUPERFAMILY SSF51679 2 339 4.32E-79 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_09775 38bf45a42f51322e40b26e99b97dccfc 352 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 8.7E-161 T 01-11-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative DOE78_12340 a734963d358722232d258c146c18b91b 131 SUPERFAMILY SSF54593 3 126 8.99E-21 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_12340 a734963d358722232d258c146c18b91b 131 Gene3D G3DSA:3.10.180.10 3 128 4.9E-27 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_12340 a734963d358722232d258c146c18b91b 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 120 1.8E-4 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_14075 9a9ee493cfd123403786618900abcf97 424 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 4.8E-119 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOE78_14075 9a9ee493cfd123403786618900abcf97 424 PIRSF PIRSF006066 1 424 2.3E-159 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DOE78_14075 9a9ee493cfd123403786618900abcf97 424 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 420 2.0E-136 T 01-11-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DOE78_17295 4352df27f11f85f150a08ee95e866418 84 ProDom PD060869 YQFT IG BH1387 3 68 7.0E-12 T 01-11-2018 IPR020277 Protein of unknown function DUF2624 DOE78_17295 4352df27f11f85f150a08ee95e866418 84 Pfam PF11116 Protein of unknown function (DUF2624) 3 83 8.3E-30 T 01-11-2018 IPR020277 Protein of unknown function DUF2624 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 Gene3D G3DSA:2.70.98.60 1 311 1.1E-127 T 01-11-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 Pfam PF02065 Melibiase 292 637 4.5E-167 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 ProSitePatterns PS00512 Alpha-galactosidase signature. 361 376 - T 01-11-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 650 728 3.1E-21 T 01-11-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 29 287 1.1E-101 T 01-11-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 Gene3D G3DSA:2.60.40.1180 635 731 4.1E-31 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PIRSF PIRSF005536 1 731 0.0 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 Gene3D G3DSA:3.20.20.70 312 634 1.6E-133 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 SUPERFAMILY SSF51445 327 668 3.83E-109 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 332 346 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 294 314 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 468 483 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 410 432 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 522 538 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 243 258 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 360 375 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_22495 8d3289ea654306eb0216774ccd561a1b 731 PRINTS PR00743 Glycosyl hydrolase family 36 signature 547 563 2.6E-61 T 01-11-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DOE78_13280 b1aa8592ec9c2c93032168ddad5ecff2 902 SUPERFAMILY SSF48452 33 167 1.14E-7 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_13280 b1aa8592ec9c2c93032168ddad5ecff2 902 Gene3D G3DSA:1.25.40.10 6 170 3.3E-8 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_17840 31f0204acd2cacf089339e33b4fb984c 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 1.5E-142 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DOE78_17840 31f0204acd2cacf089339e33b4fb984c 342 SUPERFAMILY SSF111337 1 341 3.27E-140 T 01-11-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DOE78_17840 31f0204acd2cacf089339e33b4fb984c 342 Gene3D G3DSA:3.40.1780.10 14 341 8.8E-136 T 01-11-2018 DOE78_17840 31f0204acd2cacf089339e33b4fb984c 342 Gene3D G3DSA:2.40.10.240 64 162 8.8E-136 T 01-11-2018 DOE78_17840 31f0204acd2cacf089339e33b4fb984c 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.874 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DOE78_17840 31f0204acd2cacf089339e33b4fb984c 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 342 2.6E-150 T 01-11-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DOE78_22925 e713ef91b8d6a5623044eaa865b6075c 162 Pfam PF05130 FlgN protein 1 148 3.2E-27 T 01-11-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 DOE78_22925 e713ef91b8d6a5623044eaa865b6075c 162 Gene3D G3DSA:1.20.58.300 2 134 2.7E-6 T 01-11-2018 DOE78_22925 e713ef91b8d6a5623044eaa865b6075c 162 SUPERFAMILY SSF140566 2 134 3.79E-17 T 01-11-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 DOE78_03005 e0b5bea50fe7a67ed8607be418e27d47 298 Pfam PF00005 ABC transporter 19 156 9.7E-19 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03005 e0b5bea50fe7a67ed8607be418e27d47 298 Gene3D G3DSA:3.40.50.300 1 224 3.0E-38 T 01-11-2018 DOE78_03005 e0b5bea50fe7a67ed8607be418e27d47 298 SUPERFAMILY SSF52540 4 218 7.31E-37 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03005 e0b5bea50fe7a67ed8607be418e27d47 298 SMART SM00382 28 206 0.0046 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03100 9133cab0dd79992c4ac41af88f082603 263 Gene3D G3DSA:3.40.190.10 124 221 4.3E-68 T 01-11-2018 DOE78_03100 9133cab0dd79992c4ac41af88f082603 263 SMART SM00062 41 260 2.2E-62 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_03100 9133cab0dd79992c4ac41af88f082603 263 SMART SM00079 41 259 0.001 T 01-11-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DOE78_03100 9133cab0dd79992c4ac41af88f082603 263 SUPERFAMILY SSF53850 1 260 7.95E-68 T 01-11-2018 DOE78_03100 9133cab0dd79992c4ac41af88f082603 263 Gene3D G3DSA:3.40.190.10 40 251 4.3E-68 T 01-11-2018 DOE78_03100 9133cab0dd79992c4ac41af88f082603 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 259 8.0E-61 T 01-11-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DOE78_14050 a7a4aa89624842df866cf623719e3349 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 8.4E-19 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 8.4E-19 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 8.4E-19 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 8.4E-19 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 8.4E-19 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_14050 a7a4aa89624842df866cf623719e3349 469 Gene3D G3DSA:3.20.20.80 1 469 4.7E-176 T 01-11-2018 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 TIGRFAM TIGR03356 BGL: beta-galactosidase 3 458 2.8E-145 T 01-11-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_14050 a7a4aa89624842df866cf623719e3349 469 Pfam PF00232 Glycosyl hydrolase family 1 2 466 4.3E-171 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_14050 a7a4aa89624842df866cf623719e3349 469 SUPERFAMILY SSF51445 1 467 1.06E-170 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_10000 4ac8a92f77e1402dcba1ac5c844c2a6a 63 ProDom PD053503 YBXH ORF3 1 58 9.0E-15 T 01-11-2018 IPR035314 Protein of unknown function DUF5370 DOE78_10000 4ac8a92f77e1402dcba1ac5c844c2a6a 63 Pfam PF17340 Family of unknown function (DUF5370) 1 63 2.8E-28 T 01-11-2018 IPR035314 Protein of unknown function DUF5370 DOE78_24205 024a6ad2a396883cbb84803e606a8d27 278 SUPERFAMILY SSF161098 86 269 4.06E-42 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_24205 024a6ad2a396883cbb84803e606a8d27 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 270 1.6E-29 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_24205 024a6ad2a396883cbb84803e606a8d27 278 Gene3D G3DSA:1.10.3720.10 83 274 1.5E-35 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_16745 2470fcfcd7d8e60ad087447933dc6508 612 Pfam PF01642 Methylmalonyl-CoA mutase 39 115 2.9E-10 T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16745 2470fcfcd7d8e60ad087447933dc6508 612 Pfam PF01642 Methylmalonyl-CoA mutase 152 479 1.5E-101 T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16745 2470fcfcd7d8e60ad087447933dc6508 612 SUPERFAMILY SSF51703 8 509 5.23E-108 T 01-11-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16745 2470fcfcd7d8e60ad087447933dc6508 612 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 344 369 - T 01-11-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DOE78_16745 2470fcfcd7d8e60ad087447933dc6508 612 SUPERFAMILY SSF52242 453 607 1.18E-23 T 01-11-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DOE78_16745 2470fcfcd7d8e60ad087447933dc6508 612 Gene3D G3DSA:3.40.50.280 473 607 7.2E-15 T 01-11-2018 DOE78_16745 2470fcfcd7d8e60ad087447933dc6508 612 Gene3D G3DSA:3.20.20.240 36 472 3.6E-134 T 01-11-2018 DOE78_19310 d959f11271b2269d16b02e996fd4e300 261 Gene3D G3DSA:3.90.1200.10 75 257 2.3E-22 T 01-11-2018 DOE78_19310 d959f11271b2269d16b02e996fd4e300 261 Pfam PF01636 Phosphotransferase enzyme family 14 225 4.8E-24 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_19310 d959f11271b2269d16b02e996fd4e300 261 SUPERFAMILY SSF56112 2 225 4.02E-30 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 Pfam PF00850 Histone deacetylase domain 22 316 4.3E-76 T 01-11-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01270 Histone deacetylase superfamily signature 130 153 1.3E-17 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01270 Histone deacetylase superfamily signature 249 259 1.3E-17 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01270 Histone deacetylase superfamily signature 163 178 1.3E-17 T 01-11-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 SUPERFAMILY SSF52768 6 375 1.82E-106 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01272 Acetoin utilisation ACUC protein signature 335 351 4.1E-43 T 01-11-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01272 Acetoin utilisation ACUC protein signature 107 120 4.1E-43 T 01-11-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01272 Acetoin utilisation ACUC protein signature 86 100 4.1E-43 T 01-11-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01272 Acetoin utilisation ACUC protein signature 274 290 4.1E-43 T 01-11-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01272 Acetoin utilisation ACUC protein signature 16 36 4.1E-43 T 01-11-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 PRINTS PR01272 Acetoin utilisation ACUC protein signature 352 371 4.1E-43 T 01-11-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DOE78_19185 03379d7d122eab445af7ad388e260b4a 392 Gene3D G3DSA:3.40.800.20 4 374 7.4E-100 T 01-11-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 Pfam PF00694 Aconitase C-terminal domain 701 828 1.0E-44 T 01-11-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 Gene3D G3DSA:3.30.499.20 6 374 5.1E-155 T 01-11-2018 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 ProSitePatterns PS00450 Aconitase family signature 1. 436 452 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 Gene3D G3DSA:3.20.19.10 663 901 1.5E-102 T 01-11-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 440 451 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 171 179 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 295 308 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 281 294 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 374 388 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 502 515 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 205 218 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 147 160 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 PRINTS PR00415 Aconitase family signature 219 234 1.4E-39 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 SUPERFAMILY SSF52016 640 899 1.08E-86 T 01-11-2018 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 SUPERFAMILY SSF53732 5 636 5.49E-221 T 01-11-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 ProSitePatterns PS01244 Aconitase family signature 2. 502 515 - T 01-11-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 Gene3D G3DSA:3.30.499.10 375 599 2.4E-102 T 01-11-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 900 0.0 T 01-11-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 Pfam PF00330 Aconitase family (aconitate hydratase) 75 571 1.2E-171 T 01-11-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DOE78_13455 abbaccf86228dce17c349702a6fa03b1 902 Gene3D G3DSA:1.10.1440.20 600 660 1.8E-21 T 01-11-2018 DOE78_19935 f4058027c14cfdf1199b93c6171daf28 111 SUPERFAMILY SSF48695 10 48 5.48E-6 T 01-11-2018 IPR036280 Multiheme cytochrome superfamily DOE78_15965 98efe507271f375570400a7ce47f88fb 386 Gene3D G3DSA:3.40.50.2000 177 358 7.3E-117 T 01-11-2018 DOE78_15965 98efe507271f375570400a7ce47f88fb 386 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 5 375 8.8E-179 T 01-11-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 DOE78_15965 98efe507271f375570400a7ce47f88fb 386 SUPERFAMILY SSF53756 9 377 5.89E-84 T 01-11-2018 DOE78_15965 98efe507271f375570400a7ce47f88fb 386 Pfam PF00534 Glycosyl transferases group 1 193 349 8.2E-39 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_15965 98efe507271f375570400a7ce47f88fb 386 Gene3D G3DSA:3.40.50.2000 15 368 7.3E-117 T 01-11-2018 DOE78_15965 98efe507271f375570400a7ce47f88fb 386 Pfam PF13439 Glycosyltransferase Family 4 15 179 4.8E-22 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_05845 d89e0a29099796b583dcbe6161c8fb37 417 Pfam PF12698 ABC-2 family transporter protein 19 387 1.1E-58 T 01-11-2018 DOE78_04380 5d73a23da99a62cba70bf3b1d823efd0 347 Gene3D G3DSA:2.70.98.10 8 346 1.5E-115 T 01-11-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DOE78_04380 5d73a23da99a62cba70bf3b1d823efd0 347 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 01-11-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DOE78_04380 5d73a23da99a62cba70bf3b1d823efd0 347 SUPERFAMILY SSF74650 3 344 5.71E-107 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_04380 5d73a23da99a62cba70bf3b1d823efd0 347 Pfam PF01263 Aldose 1-epimerase 17 343 1.2E-84 T 01-11-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DOE78_04380 5d73a23da99a62cba70bf3b1d823efd0 347 PIRSF PIRSF005096 1 347 3.7E-129 T 01-11-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DOE78_10980 4b0e4905bde354064a7a7ef0838541a0 147 Pfam PF01047 MarR family 34 92 7.3E-10 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_10980 4b0e4905bde354064a7a7ef0838541a0 147 Gene3D G3DSA:1.10.10.10 5 142 1.8E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10980 4b0e4905bde354064a7a7ef0838541a0 147 SUPERFAMILY SSF46785 21 140 2.35E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10980 4b0e4905bde354064a7a7ef0838541a0 147 SMART SM00347 27 127 3.7E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_00040 2c82e2c24a76d59855c956fc945633da 365 Gene3D G3DSA:1.10.3210.10 1 309 6.8E-62 T 01-11-2018 DOE78_00040 2c82e2c24a76d59855c956fc945633da 365 Pfam PF13487 HD domain 199 259 1.2E-13 T 01-11-2018 DOE78_00040 2c82e2c24a76d59855c956fc945633da 365 SUPERFAMILY SSF109604 139 301 1.32E-23 T 01-11-2018 DOE78_08750 db8a66c39f07f58ea4a03918b1030c63 196 SUPERFAMILY SSF56112 27 151 1.61E-11 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_08750 db8a66c39f07f58ea4a03918b1030c63 196 Gene3D G3DSA:1.10.510.10 9 119 2.0E-5 T 01-11-2018 DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 SUPERFAMILY SSF53187 5 370 2.71E-60 T 01-11-2018 DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 Gene3D G3DSA:3.30.70.360 171 282 1.6E-80 T 01-11-2018 DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 Pfam PF01546 Peptidase family M20/M25/M40 72 369 1.3E-26 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 Pfam PF07687 Peptidase dimerisation domain 179 265 3.0E-13 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 Gene3D G3DSA:3.40.630.10 17 356 1.6E-80 T 01-11-2018 DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 PIRSF PIRSF005962 2 374 1.7E-94 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 SUPERFAMILY SSF55031 177 277 4.34E-19 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_05025 cece5a2419e26c6519261c4e48bd82b9 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 358 4.3E-79 T 01-11-2018 IPR017439 Amidohydrolase GO:0016787 DOE78_09030 6d6458e3141b35bbbf04ca690edd0b7f 284 SUPERFAMILY SSF51735 2 183 1.82E-59 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_09030 6d6458e3141b35bbbf04ca690edd0b7f 284 PIRSF PIRSF000105 1 284 2.0E-96 T 01-11-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 DOE78_09030 6d6458e3141b35bbbf04ca690edd0b7f 284 Gene3D G3DSA:3.40.50.720 1 189 1.5E-71 T 01-11-2018 DOE78_09030 6d6458e3141b35bbbf04ca690edd0b7f 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 1.5E-34 T 01-11-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DOE78_09030 6d6458e3141b35bbbf04ca690edd0b7f 284 SUPERFAMILY SSF48179 186 284 2.04E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_09030 6d6458e3141b35bbbf04ca690edd0b7f 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 184 7.9E-67 T 01-11-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DOE78_09030 6d6458e3141b35bbbf04ca690edd0b7f 284 Gene3D G3DSA:1.10.1040.10 190 284 2.9E-33 T 01-11-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DOE78_20785 cc627089b70d5f671e3040917e687be0 387 SUPERFAMILY SSF53383 7 386 7.58E-118 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_20785 cc627089b70d5f671e3040917e687be0 387 Gene3D G3DSA:3.90.1150.10 32 380 2.3E-129 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_20785 cc627089b70d5f671e3040917e687be0 387 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DOE78_20785 cc627089b70d5f671e3040917e687be0 387 Gene3D G3DSA:3.40.640.10 63 284 2.3E-129 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_20785 cc627089b70d5f671e3040917e687be0 387 Pfam PF00155 Aminotransferase class I and II 32 381 1.5E-72 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_19390 f4255fc5db0194b3c45bb9d0fc1f79ba 99 SMART SM00450 6 99 5.2E-15 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_19390 f4255fc5db0194b3c45bb9d0fc1f79ba 99 Pfam PF00581 Rhodanese-like domain 7 95 1.1E-15 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_19390 f4255fc5db0194b3c45bb9d0fc1f79ba 99 SUPERFAMILY SSF52821 2 95 1.83E-30 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_19390 f4255fc5db0194b3c45bb9d0fc1f79ba 99 Gene3D G3DSA:3.40.250.10 2 99 6.8E-30 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_07545 b646ad80834fa3108fd2399079542f98 161 Pfam PF03061 Thioesterase superfamily 73 147 1.3E-15 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DOE78_07545 b646ad80834fa3108fd2399079542f98 161 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 50 154 1.2E-16 T 01-11-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DOE78_07545 b646ad80834fa3108fd2399079542f98 161 SUPERFAMILY SSF54637 51 160 1.63E-26 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_07545 b646ad80834fa3108fd2399079542f98 161 Gene3D G3DSA:3.10.129.10 1 161 5.1E-46 T 01-11-2018 DOE78_24480 442f52a03bf7ec4e5abdf62c0359dfc0 175 Pfam PF11553 Protein of unknown function (DUF3231) 16 173 6.1E-19 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_24480 442f52a03bf7ec4e5abdf62c0359dfc0 175 Gene3D G3DSA:1.20.1260.10 14 166 2.3E-39 T 01-11-2018 IPR012347 Ferritin-like DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 PRINTS PR00449 Transforming protein P21 ras signature 328 341 1.1E-5 T 01-11-2018 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 PRINTS PR00449 Transforming protein P21 ras signature 264 286 1.1E-5 T 01-11-2018 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 PRINTS PR00449 Transforming protein P21 ras signature 224 245 1.1E-5 T 01-11-2018 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 SUPERFAMILY SSF52540 78 377 1.54E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 2.5E-132 T 01-11-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 374 2.9E-28 T 01-11-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 Gene3D G3DSA:1.20.120.430 127 461 5.6E-107 T 01-11-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 Pfam PF12631 MnmE helical domain 129 458 9.2E-58 T 01-11-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 Gene3D G3DSA:3.30.1360.120 1 126 6.6E-49 T 01-11-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 Gene3D G3DSA:3.40.50.300 224 389 5.6E-107 T 01-11-2018 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 461 34.541 T 01-11-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 Pfam PF01926 50S ribosome-binding GTPase 227 338 4.5E-25 T 01-11-2018 IPR006073 GTP binding domain GO:0005525 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 SUPERFAMILY SSF116878 127 461 1.22E-49 T 01-11-2018 DOE78_24710 268664c01a38a659a94b02c92de5abe0 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 126 7.1E-41 T 01-11-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DOE78_02990 20b87e9f6578761a8573be2a302f9fcd 72 Pfam PF11148 Protein of unknown function (DUF2922) 3 68 1.2E-22 T 01-11-2018 IPR021321 Protein of unknown function DUF2922 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 Gene3D G3DSA:3.60.70.12 6 196 3.4E-70 T 01-11-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 37 410 6.0E-146 T 01-11-2018 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 Gene3D G3DSA:3.10.20.340 282 410 4.1E-49 T 01-11-2018 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 Pfam PF01960 ArgJ family 26 410 1.9E-148 T 01-11-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 17 410 3.0E-161 T 01-11-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 410 144.267 T 01-11-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 SUPERFAMILY SSF56266 21 406 2.75E-138 T 01-11-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DOE78_06470 5e260d3607e2f86e2ed40ec640b2afa4 410 Gene3D G3DSA:3.30.2330.10 197 281 7.2E-33 T 01-11-2018 DOE78_10035 888bbe69bca834a6eaf64575b6b1c335 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 1 265 3.5E-61 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_10035 888bbe69bca834a6eaf64575b6b1c335 272 Gene3D G3DSA:3.40.50.1000 1 264 2.8E-61 T 01-11-2018 IPR023214 HAD superfamily DOE78_10035 888bbe69bca834a6eaf64575b6b1c335 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 1 264 1.5E-57 T 01-11-2018 DOE78_10035 888bbe69bca834a6eaf64575b6b1c335 272 Gene3D G3DSA:3.30.1240.10 74 195 2.8E-61 T 01-11-2018 DOE78_10035 888bbe69bca834a6eaf64575b6b1c335 272 SUPERFAMILY SSF56784 2 271 4.61E-57 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_10035 888bbe69bca834a6eaf64575b6b1c335 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 2 239 7.2E-21 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_15485 8d2393770caf3141dd588750a4714db8 256 Pfam PF14344 Domain of unknown function (DUF4397) 164 252 2.7E-10 T 01-11-2018 IPR025510 Domain of unknown function DUF4397 DOE78_15485 8d2393770caf3141dd588750a4714db8 256 Pfam PF14344 Domain of unknown function (DUF4397) 65 178 3.2E-35 T 01-11-2018 IPR025510 Domain of unknown function DUF4397 DOE78_13655 8c43c18d35324cf3762a3914d45b6f15 113 Gene3D G3DSA:3.40.630.30 1 113 4.5E-30 T 01-11-2018 DOE78_13655 8c43c18d35324cf3762a3914d45b6f15 113 SUPERFAMILY SSF55729 2 105 6.08E-19 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_13655 8c43c18d35324cf3762a3914d45b6f15 113 Pfam PF00583 Acetyltransferase (GNAT) family 14 101 5.1E-13 T 01-11-2018 IPR000182 GNAT domain DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 SMART SM00100 8 125 8.1E-11 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 Gene3D G3DSA:1.10.10.10 142 230 8.4E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 Pfam PF13545 Crp-like helix-turn-helix domain 147 218 4.5E-17 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 SUPERFAMILY SSF46785 144 228 4.71E-24 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 Pfam PF00027 Cyclic nucleotide-binding domain 26 112 9.0E-15 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 SMART SM00419 164 212 6.2E-14 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 201 4.3E-7 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 170 186 4.3E-7 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 SUPERFAMILY SSF51206 13 141 2.23E-27 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 ProSitePatterns PS00042 Crp-type HTH domain signature. 172 195 - T 01-11-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DOE78_14495 c1a4d0845bd0bc8abee8df03a0084339 233 Gene3D G3DSA:2.60.120.10 8 141 1.1E-26 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_10840 0f37201053211c74f05a2ed9e0f3e1e5 231 SUPERFAMILY SSF53335 9 227 6.43E-27 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_10840 0f37201053211c74f05a2ed9e0f3e1e5 231 Gene3D G3DSA:3.40.50.150 7 230 8.2E-31 T 01-11-2018 DOE78_10840 0f37201053211c74f05a2ed9e0f3e1e5 231 Pfam PF08242 Methyltransferase domain 49 147 4.1E-13 T 01-11-2018 IPR013217 Methyltransferase type 12 DOE78_22325 69f553be2c16db4ed29aa8a45b7896b4 163 SMART SM00422 39 107 1.8E-22 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_22325 69f553be2c16db4ed29aa8a45b7896b4 163 Pfam PF13411 MerR HTH family regulatory protein 40 103 1.0E-19 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_22325 69f553be2c16db4ed29aa8a45b7896b4 163 SUPERFAMILY SSF46955 39 136 1.9E-21 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_22325 69f553be2c16db4ed29aa8a45b7896b4 163 Gene3D G3DSA:1.10.1660.10 29 150 4.8E-25 T 01-11-2018 DOE78_22325 69f553be2c16db4ed29aa8a45b7896b4 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 51 1.5E-7 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_22325 69f553be2c16db4ed29aa8a45b7896b4 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 51 64 1.5E-7 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_22325 69f553be2c16db4ed29aa8a45b7896b4 163 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 74 94 1.5E-7 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_24365 2747fd31482ca73793814c0275c29f0d 337 PIRSF PIRSF009290 1 337 1.4E-117 T 01-11-2018 IPR024713 Fructosamine deglycase FrlB DOE78_24365 2747fd31482ca73793814c0275c29f0d 337 Gene3D G3DSA:3.40.50.10490 2 165 7.6E-39 T 01-11-2018 DOE78_24365 2747fd31482ca73793814c0275c29f0d 337 SUPERFAMILY SSF53697 20 337 4.34E-57 T 01-11-2018 DOE78_24365 2747fd31482ca73793814c0275c29f0d 337 Pfam PF01380 SIS domain 37 141 5.1E-13 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_24365 2747fd31482ca73793814c0275c29f0d 337 Gene3D G3DSA:3.40.50.10490 166 325 9.0E-53 T 01-11-2018 DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 SUPERFAMILY SSF52540 326 568 1.33E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 SMART SM00382 358 544 4.9E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 SUPERFAMILY SSF90123 8 313 9.94E-47 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 Pfam PF00664 ABC transporter transmembrane region 16 277 1.6E-29 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 Gene3D G3DSA:1.20.1560.10 5 315 3.5E-37 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 Pfam PF00005 ABC transporter 349 498 6.3E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 Gene3D G3DSA:3.40.50.300 316 571 9.8E-75 T 01-11-2018 DOE78_05065 ff7df7cf697804b8974d66e2e5a06598 573 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 12 538 8.5E-169 T 01-11-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 DOE78_03655 57f2e524a1a29d6433d8ce2d957ae8b5 121 SUPERFAMILY SSF46785 7 107 1.39E-34 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_03655 57f2e524a1a29d6433d8ce2d957ae8b5 121 Pfam PF01638 HxlR-like helix-turn-helix 19 108 1.4E-39 T 01-11-2018 IPR002577 Helix-turn-helix, HxlR type DOE78_03655 57f2e524a1a29d6433d8ce2d957ae8b5 121 Gene3D G3DSA:1.10.10.10 2 119 9.3E-39 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_19995 1777767e1720cbf6ef22b8b9695c5ff8 327 SUPERFAMILY SSF52518 8 327 3.32E-106 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_19995 1777767e1720cbf6ef22b8b9695c5ff8 327 Gene3D G3DSA:3.40.50.970 2 327 2.1E-132 T 01-11-2018 DOE78_19995 1777767e1720cbf6ef22b8b9695c5ff8 327 Pfam PF00676 Dehydrogenase E1 component 23 317 5.1E-91 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DOE78_23765 f6c2ed3d9d828ee7f760de4174e2751a 184 Pfam PF02659 Putative manganese efflux pump 35 181 2.0E-38 T 01-11-2018 IPR003810 Putative manganese efflux pump DOE78_23765 f6c2ed3d9d828ee7f760de4174e2751a 184 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 6 184 20.617 T 01-11-2018 IPR022929 Putative manganese efflux pump MntP DOE78_03165 fe17aeebdad68e65738ab92c5b2da8f0 529 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 45 503 6.9E-181 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_03165 fe17aeebdad68e65738ab92c5b2da8f0 529 PIRSF PIRSF005690 29 517 7.0E-173 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_07880 936ebd618b33a60261b2b240a4d306d8 569 Pfam PF05670 Domain of unknown function (DUF814) 454 538 8.0E-29 T 01-11-2018 IPR008532 Domain of unknown function DUF814 DOE78_07880 936ebd618b33a60261b2b240a4d306d8 569 Gene3D G3DSA:2.30.310.10 1 167 8.8E-67 T 01-11-2018 DOE78_07880 936ebd618b33a60261b2b240a4d306d8 569 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 443 1.3E-159 T 01-11-2018 DOE78_07880 936ebd618b33a60261b2b240a4d306d8 569 Gene3D G3DSA:1.10.8.50 168 237 1.4E-25 T 01-11-2018 DOE78_07880 936ebd618b33a60261b2b240a4d306d8 569 Gene3D G3DSA:3.40.970.40 240 289 2.9E-13 T 01-11-2018 DOE78_07335 a64dd22806625275ba3133495cd7d4bd 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 25 363 1.3E-146 T 01-11-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DOE78_07335 a64dd22806625275ba3133495cd7d4bd 371 Gene3D G3DSA:3.40.50.970 5 371 1.7E-125 T 01-11-2018 DOE78_07335 a64dd22806625275ba3133495cd7d4bd 371 SUPERFAMILY SSF52518 20 366 2.4E-103 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_07335 a64dd22806625275ba3133495cd7d4bd 371 Pfam PF00676 Dehydrogenase E1 component 54 343 1.9E-105 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 388 398 - T 01-11-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 PRINTS PR00723 Subtilisin serine protease family (S8) signature 194 213 2.7E-21 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 PRINTS PR00723 Subtilisin serine protease family (S8) signature 232 245 2.7E-21 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 PRINTS PR00723 Subtilisin serine protease family (S8) signature 387 403 2.7E-21 T 01-11-2018 IPR015500 Peptidase S8, subtilisin-related DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 Pfam PF00082 Subtilase family 195 438 9.3E-47 T 01-11-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 236 246 - T 01-11-2018 IPR022398 Peptidase S8, subtilisin, His-active site DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 Gene3D G3DSA:3.40.50.200 148 450 3.5E-96 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 199 210 - T 01-11-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DOE78_20730 2b2bcc08f3c94e86a720e48f73be13d7 452 SUPERFAMILY SSF52743 173 449 1.83E-93 T 01-11-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 SUPERFAMILY SSF54966 1 115 7.85E-28 T 01-11-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 402 2.2E-198 T 01-11-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 Gene3D G3DSA:3.30.70.150 1 115 2.9E-30 T 01-11-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 163 171 - T 01-11-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 SUPERFAMILY SSF51649 115 403 4.06E-86 T 01-11-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 402 57.427 T 01-11-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 Gene3D G3DSA:3.20.20.110 116 407 2.4E-96 T 01-11-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 2 95 3.9E-8 T 01-11-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DOE78_07025 562ba020e5a203aa576db2efe172682c 410 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 121 401 3.5E-42 T 01-11-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DOE78_10130 e272e840f177160622d2f5a6bad042f6 126 SUPERFAMILY SSF54593 2 125 9.4E-24 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10130 e272e840f177160622d2f5a6bad042f6 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 3.0E-13 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_10130 e272e840f177160622d2f5a6bad042f6 126 Gene3D G3DSA:3.10.180.10 1 126 6.9E-35 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_17810 088f31d536a1906b3d073f4c1a9cdcf3 98 Pfam PF13797 Post-transcriptional regulator 8 86 2.8E-29 T 01-11-2018 IPR025716 Post-transcriptional regulator DOE78_04590 e5f0ef9d36a28890d18b2982e43ce965 120 PIRSF PIRSF002030 1 120 1.5E-43 T 01-11-2018 IPR016339 Truncated hemoglobin, group 1 DOE78_04590 e5f0ef9d36a28890d18b2982e43ce965 120 Pfam PF01152 Bacterial-like globin 4 117 5.8E-27 T 01-11-2018 IPR001486 Truncated hemoglobin GO:0019825 DOE78_04590 e5f0ef9d36a28890d18b2982e43ce965 120 Gene3D G3DSA:1.10.490.10 1 120 7.2E-42 T 01-11-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DOE78_04590 e5f0ef9d36a28890d18b2982e43ce965 120 SUPERFAMILY SSF46458 3 118 1.19E-34 T 01-11-2018 IPR009050 Globin-like superfamily DOE78_06585 34bcb16cda83ca3cfdccc3d252ebe06f 248 Hamap MF_01860 UPF0736 protein . 1 248 49.459 T 01-11-2018 IPR020909 UPF0736 DOE78_06585 34bcb16cda83ca3cfdccc3d252ebe06f 248 Pfam PF12227 Protein of unknown function (DUF3603) 35 248 5.5E-114 T 01-11-2018 IPR020909 UPF0736 DOE78_13975 8ace13f5589e0e716a99ef217c7ddca6 208 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 3 206 7.3E-21 T 01-11-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DOE78_18045 8ca945be06aa2b63b8c575ae549b6e1f 261 SUPERFAMILY SSF69618 9 256 2.22E-62 T 01-11-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18045 8ca945be06aa2b63b8c575ae549b6e1f 261 Pfam PF02602 Uroporphyrinogen-III synthase HemD 24 249 1.4E-58 T 01-11-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DOE78_18045 8ca945be06aa2b63b8c575ae549b6e1f 261 Gene3D G3DSA:3.40.50.10090 5 131 1.7E-22 T 01-11-2018 DOE78_18045 8ca945be06aa2b63b8c575ae549b6e1f 261 Gene3D G3DSA:3.40.50.10090 132 257 3.5E-22 T 01-11-2018 DOE78_04190 208b5378113df7059b9b47366f9018ae 363 Pfam PF13407 Periplasmic binding protein domain 56 313 2.3E-62 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_04190 208b5378113df7059b9b47366f9018ae 363 SUPERFAMILY SSF53822 52 347 2.2E-74 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_04190 208b5378113df7059b9b47366f9018ae 363 Gene3D G3DSA:3.40.50.2300 157 345 4.3E-113 T 01-11-2018 DOE78_04190 208b5378113df7059b9b47366f9018ae 363 Gene3D G3DSA:3.40.50.2300 57 333 4.3E-113 T 01-11-2018 DOE78_04190 208b5378113df7059b9b47366f9018ae 363 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 56 357 9.2E-124 T 01-11-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 01-11-2018 IPR020610 Thiolase, active site GO:0016747 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.9E-49 T 01-11-2018 IPR020617 Thiolase, C-terminal GO:0016747 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 Gene3D G3DSA:3.40.47.10 128 387 1.3E-150 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 01-11-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 01-11-2018 IPR020613 Thiolase, conserved site GO:0016747 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 Gene3D G3DSA:3.40.47.10 6 274 1.3E-150 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 4.2E-79 T 01-11-2018 IPR020616 Thiolase, N-terminal GO:0016747 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 SUPERFAMILY SSF53901 269 390 3.33E-44 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 9.6E-143 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 SUPERFAMILY SSF53901 1 264 1.38E-76 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_21205 4e24d88a34a8bf7d8bf49549343bdf93 391 PIRSF PIRSF000429 1 391 2.8E-133 T 01-11-2018 IPR002155 Thiolase GO:0016747 DOE78_09655 1a24b5daa87cdc281fdff9421a9eaeed 307 SUPERFAMILY SSF51735 1 304 5.88E-87 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_09655 1a24b5daa87cdc281fdff9421a9eaeed 307 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 233 7.0E-62 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_09655 1a24b5daa87cdc281fdff9421a9eaeed 307 Gene3D G3DSA:3.90.25.10 172 297 1.9E-99 T 01-11-2018 DOE78_09655 1a24b5daa87cdc281fdff9421a9eaeed 307 Gene3D G3DSA:3.40.50.720 3 234 1.9E-99 T 01-11-2018 DOE78_02630 a8aef3418b35abad1cf5ff3eee7a0a81 195 Gene3D G3DSA:1.10.1760.20 2 195 7.4E-63 T 01-11-2018 DOE78_02630 a8aef3418b35abad1cf5ff3eee7a0a81 195 Pfam PF12822 ECF transporter, substrate-specific component 9 185 1.5E-25 T 01-11-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 DOE78_12155 3eded4cfa9b4110270909f2c721d813a 151 SUPERFAMILY SSF109854 3 149 3.05E-30 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_12155 3eded4cfa9b4110270909f2c721d813a 151 Pfam PF12867 DinB superfamily 10 144 9.5E-15 T 01-11-2018 IPR024775 DinB-like domain DOE78_12155 3eded4cfa9b4110270909f2c721d813a 151 Gene3D G3DSA:1.20.120.450 1 150 3.7E-34 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_11630 3bdd8a033ea485d858d82610988636a8 556 SMART SM00382 180 355 0.0072 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_11630 3bdd8a033ea485d858d82610988636a8 556 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 183 525 2.3E-104 T 01-11-2018 IPR018647 Domain of unknown function DUF2075 DOE78_11630 3bdd8a033ea485d858d82610988636a8 556 SUPERFAMILY SSF52540 97 311 8.44E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11630 3bdd8a033ea485d858d82610988636a8 556 SUPERFAMILY SSF82771 27 92 7.72E-5 T 01-11-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DOE78_11630 3bdd8a033ea485d858d82610988636a8 556 Gene3D G3DSA:3.40.50.300 156 341 2.1E-10 T 01-11-2018 DOE78_04950 af2323e78ead9a11f1fb01e82f2030fd 1020 SUPERFAMILY SSF55729 7 146 3.09E-22 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_04950 af2323e78ead9a11f1fb01e82f2030fd 1020 Gene3D G3DSA:3.40.630.30 27 147 4.4E-21 T 01-11-2018 DOE78_04950 af2323e78ead9a11f1fb01e82f2030fd 1020 Pfam PF00583 Acetyltransferase (GNAT) family 50 137 1.1E-13 T 01-11-2018 IPR000182 GNAT domain DOE78_17980 c711da5830c5fa3c1aca4e85e31bd8da 38 Pfam PF04002 RadC-like JAB domain 1 36 1.3E-10 T 01-11-2018 IPR025657 RadC-like JAB domain DOE78_17980 c711da5830c5fa3c1aca4e85e31bd8da 38 Gene3D G3DSA:3.40.140.10 1 38 6.3E-11 T 01-11-2018 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 Gene3D G3DSA:3.50.50.60 7 306 1.5E-115 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 295 5.6E-30 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 3.6E-23 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 3.6E-23 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.6E-23 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 3.6E-23 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 3.6E-23 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 Hamap MF_01685 Ferredoxin--NADP reductase. 7 330 43.966 T 01-11-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 SUPERFAMILY SSF51905 8 312 7.78E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.5E-18 T 01-11-2018 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.5E-18 T 01-11-2018 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 1.5E-18 T 01-11-2018 DOE78_20975 86e8d8e6984d3bba6999302772af9a7c 332 Gene3D G3DSA:3.50.50.60 128 248 1.5E-115 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_10935 a17ed8cb012c7611fdfdd08e537bfa55 437 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 435 1.4E-187 T 01-11-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DOE78_10935 a17ed8cb012c7611fdfdd08e537bfa55 437 Pfam PF02378 Phosphotransferase system, EIIC 29 360 2.0E-76 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_10935 a17ed8cb012c7611fdfdd08e537bfa55 437 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 435 1.4E-187 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_10935 a17ed8cb012c7611fdfdd08e537bfa55 437 PIRSF PIRSF006351 1 437 6.0E-153 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_16330 92495b3c4e1907415d54601ba43054f2 175 Pfam PF00578 AhpC/TSA family 38 154 1.8E-35 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_16330 92495b3c4e1907415d54601ba43054f2 175 SUPERFAMILY SSF52833 35 174 9.87E-44 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_16330 92495b3c4e1907415d54601ba43054f2 175 Gene3D G3DSA:3.40.30.10 24 175 3.5E-47 T 01-11-2018 DOE78_00325 4d5634b84ca9a6f9bcba243082308797 76 ProDom PD057826 YABK 4 75 1.0E-20 T 01-11-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 DOE78_00325 4d5634b84ca9a6f9bcba243082308797 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 7.5E-33 T 01-11-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.9E-17 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 Pfam PF13377 Periplasmic binding protein-like domain 167 327 3.1E-35 T 01-11-2018 DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 Gene3D G3DSA:3.40.50.2300 159 289 1.3E-78 T 01-11-2018 DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 Gene3D G3DSA:3.40.50.2300 65 307 1.3E-78 T 01-11-2018 DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 SUPERFAMILY SSF53822 62 328 6.48E-77 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 SMART SM00354 1 71 6.4E-29 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 Gene3D G3DSA:1.10.260.40 1 59 9.0E-21 T 01-11-2018 DOE78_12270 e8abb40774d715f4830a0e28c86e63f3 329 SUPERFAMILY SSF47413 1 59 3.71E-16 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 Gene3D G3DSA:3.40.605.10 9 509 3.0E-186 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 514 66.306 T 01-11-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 SUPERFAMILY SSF53720 3 510 1.44E-152 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 4 513 1.3E-252 T 01-11-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 284 291 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 Pfam PF00171 Aldehyde dehydrogenase family 48 509 8.4E-156 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 312 323 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DOE78_10160 5afc47d4efaf060a31d828f1597f74c3 514 Gene3D G3DSA:3.40.309.10 289 479 3.0E-186 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_21450 518c3e5feae379e2526306bac655edd2 416 SUPERFAMILY SSF103473 20 404 3.4E-42 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_21450 518c3e5feae379e2526306bac655edd2 416 Pfam PF07690 Major Facilitator Superfamily 25 365 7.3E-26 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_21450 518c3e5feae379e2526306bac655edd2 416 Gene3D G3DSA:1.20.1250.20 16 214 3.5E-18 T 01-11-2018 DOE78_21450 518c3e5feae379e2526306bac655edd2 416 Gene3D G3DSA:1.20.1250.20 216 406 4.6E-16 T 01-11-2018 DOE78_13220 66e6751cfbb4b6656f165f7065c5e76a 276 SUPERFAMILY SSF52091 167 274 7.46E-15 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_13220 66e6751cfbb4b6656f165f7065c5e76a 276 Pfam PF01740 STAS domain 173 272 6.7E-12 T 01-11-2018 IPR002645 STAS domain DOE78_13220 66e6751cfbb4b6656f165f7065c5e76a 276 Gene3D G3DSA:3.30.750.24 164 276 6.7E-33 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 1.0E-35 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 PRINTS PR00834 HtrA/DegQ protease family signature 256 273 1.0E-35 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 1.0E-35 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 1.0E-35 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 PRINTS PR00834 HtrA/DegQ protease family signature 347 359 1.0E-35 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 PRINTS PR00834 HtrA/DegQ protease family signature 190 214 1.0E-35 T 01-11-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 Gene3D G3DSA:2.40.10.10 67 179 1.4E-25 T 01-11-2018 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 Gene3D G3DSA:2.30.42.10 304 402 5.1E-24 T 01-11-2018 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 Pfam PF13180 PDZ domain 301 399 1.3E-17 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 SUPERFAMILY SSF50156 300 399 1.45E-17 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 SMART SM00228 301 390 2.1E-9 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 SUPERFAMILY SSF50494 76 310 3.24E-54 T 01-11-2018 IPR009003 Peptidase S1, PA clan DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 Gene3D G3DSA:2.40.10.10 181 303 3.3E-37 T 01-11-2018 DOE78_24555 14de4add8dcf94a4524476e5f5730f55 404 Pfam PF13365 Trypsin-like peptidase domain 116 263 7.3E-30 T 01-11-2018 DOE78_22650 3b852527e17a59cf1db86ac8ceeeded1 440 Gene3D G3DSA:3.40.190.10 37 438 1.6E-67 T 01-11-2018 DOE78_22650 3b852527e17a59cf1db86ac8ceeeded1 440 SUPERFAMILY SSF53850 18 435 1.14E-57 T 01-11-2018 DOE78_22650 3b852527e17a59cf1db86ac8ceeeded1 440 Pfam PF01547 Bacterial extracellular solute-binding protein 62 351 3.9E-27 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 SUPERFAMILY SSF50104 1 100 1.62E-38 T 01-11-2018 IPR008991 Translation protein SH3-like domain superfamily DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 9.7E-41 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 SMART SM00739 2 29 6.2E-7 T 01-11-2018 IPR005824 KOW DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 Gene3D G3DSA:2.30.30.30 1 100 9.0E-42 T 01-11-2018 IPR014722 Ribosomal protein L2, domain 2 DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 5.6E-31 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 Pfam PF00467 KOW motif 5 36 2.9E-9 T 01-11-2018 IPR005824 KOW DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 23.154 T 01-11-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00780 45268e92b41ea15c2eeb6dcd30bc3472 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 01-11-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_23175 0b69c748986364cfdba6496148cf0214 159 Pfam PF08281 Sigma-70, region 4 108 152 1.5E-7 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_23175 0b69c748986364cfdba6496148cf0214 159 Gene3D G3DSA:1.10.10.10 26 157 3.2E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_23175 0b69c748986364cfdba6496148cf0214 159 SUPERFAMILY SSF88946 3 71 1.16E-10 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_23175 0b69c748986364cfdba6496148cf0214 159 Pfam PF04542 Sigma-70 region 2 9 74 1.4E-10 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_23175 0b69c748986364cfdba6496148cf0214 159 SUPERFAMILY SSF88659 106 154 7.06E-11 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_15610 1b2ee06290dc2212a6bbb2a5b25cdbb9 302 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.1E-138 T 01-11-2018 IPR033752 MetA family DOE78_15610 1b2ee06290dc2212a6bbb2a5b25cdbb9 302 SUPERFAMILY SSF52317 17 297 1.6E-100 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_15610 1b2ee06290dc2212a6bbb2a5b25cdbb9 302 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 3.8E-134 T 01-11-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 DOE78_15610 1b2ee06290dc2212a6bbb2a5b25cdbb9 302 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 42.537 T 01-11-2018 IPR033752 MetA family DOE78_15610 1b2ee06290dc2212a6bbb2a5b25cdbb9 302 PIRSF PIRSF000450 1 302 8.7E-149 T 01-11-2018 IPR033752 MetA family DOE78_15610 1b2ee06290dc2212a6bbb2a5b25cdbb9 302 Gene3D G3DSA:3.40.50.880 1 301 3.7E-127 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_15610 1b2ee06290dc2212a6bbb2a5b25cdbb9 302 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-93 T 01-11-2018 DOE78_11405 3921b22240b1afd2bc59814d9ce65d35 317 Gene3D G3DSA:3.90.180.10 9 313 7.9E-97 T 01-11-2018 DOE78_11405 3921b22240b1afd2bc59814d9ce65d35 317 SUPERFAMILY SSF51735 118 290 1.31E-37 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11405 3921b22240b1afd2bc59814d9ce65d35 317 SMART SM00829 10 314 5.2E-24 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_11405 3921b22240b1afd2bc59814d9ce65d35 317 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 97 2.0E-8 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_11405 3921b22240b1afd2bc59814d9ce65d35 317 SUPERFAMILY SSF50129 4 151 1.83E-34 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_11405 3921b22240b1afd2bc59814d9ce65d35 317 Gene3D G3DSA:3.40.50.720 129 265 7.9E-97 T 01-11-2018 DOE78_11405 3921b22240b1afd2bc59814d9ce65d35 317 Pfam PF13602 Zinc-binding dehydrogenase 188 314 3.3E-26 T 01-11-2018 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 Pfam PF00005 ABC transporter 348 476 2.4E-25 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 SUPERFAMILY SSF52540 4 248 2.8E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 Gene3D G3DSA:1.10.287.380 561 640 6.7E-7 T 01-11-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 Gene3D G3DSA:3.40.50.300 1 289 6.7E-70 T 01-11-2018 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 Pfam PF00005 ABC transporter 19 195 9.0E-27 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 Pfam PF16326 ABC transporter C-terminal domain 572 640 5.0E-13 T 01-11-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 SMART SM00382 28 310 4.2E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 SMART SM00382 355 521 2.7E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 SUPERFAMILY SSF52540 319 534 3.19E-46 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 Gene3D G3DSA:3.40.50.300 292 557 7.3E-61 T 01-11-2018 DOE78_01500 04bbe23ec38333637a9a62b823f87cab 640 Pfam PF12848 ABC transporter 234 317 7.3E-26 T 01-11-2018 IPR032781 ABC-transporter extension domain DOE78_14265 92f8ba12e5de1ecb6613fa7f3be01a35 415 TIGRFAM TIGR01224 hutI: imidazolonepropionase 33 408 5.0E-147 T 01-11-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14265 92f8ba12e5de1ecb6613fa7f3be01a35 415 SUPERFAMILY SSF51556 72 371 1.33E-77 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_14265 92f8ba12e5de1ecb6613fa7f3be01a35 415 Gene3D G3DSA:3.20.20.140 73 370 1.3E-168 T 01-11-2018 DOE78_14265 92f8ba12e5de1ecb6613fa7f3be01a35 415 Pfam PF01979 Amidohydrolase family 69 408 4.4E-21 T 01-11-2018 IPR006680 Amidohydrolase-related GO:0016787 DOE78_14265 92f8ba12e5de1ecb6613fa7f3be01a35 415 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 410 42.518 T 01-11-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14265 92f8ba12e5de1ecb6613fa7f3be01a35 415 Gene3D G3DSA:2.30.40.10 7 408 1.3E-168 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_14265 92f8ba12e5de1ecb6613fa7f3be01a35 415 SUPERFAMILY SSF51338 27 410 9.09E-18 T 01-11-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 Gene3D G3DSA:3.40.50.300 345 595 1.2E-87 T 01-11-2018 DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 Pfam PF00005 ABC transporter 365 514 1.5E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 SUPERFAMILY SSF90123 18 330 1.2E-71 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 Pfam PF00664 ABC transporter transmembrane region 31 303 1.2E-40 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 Gene3D G3DSA:1.20.1560.10 3 334 6.6E-80 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 SUPERFAMILY SSF52540 343 584 2.98E-85 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08715 c5ed96f624b519370b8d396d24a540c9 596 SMART SM00382 374 566 5.2E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_00235 13985d0109cfe55962df7b34c6b66524 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.8E-11 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DOE78_00235 13985d0109cfe55962df7b34c6b66524 94 Gene3D G3DSA:2.10.260.10 1 51 2.3E-26 T 01-11-2018 DOE78_00235 13985d0109cfe55962df7b34c6b66524 94 SMART SM00966 8 51 6.1E-10 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DOE78_00235 13985d0109cfe55962df7b34c6b66524 94 SUPERFAMILY SSF89447 1 52 1.29E-16 T 01-11-2018 IPR037914 SpoVT-AbrB domain superfamily DOE78_00235 13985d0109cfe55962df7b34c6b66524 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 8.2E-11 T 01-11-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 214 1.0E-26 T 01-11-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 01-11-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 Gene3D G3DSA:3.40.1010.10 2 122 1.1E-45 T 01-11-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 Gene3D G3DSA:3.30.950.10 123 238 6.2E-42 T 01-11-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 SUPERFAMILY SSF53790 13 231 6.94E-80 T 01-11-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 PIRSF PIRSF005917 3 291 6.3E-104 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 36.225 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DOE78_00230 2351585390f6ab4da0072c3a7cb7af12 291 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 15 290 3.1E-83 T 01-11-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DOE78_07620 84fa56c0ec136e792ed10769cbc60bc9 57 SUPERFAMILY SSF57829 1 55 2.5E-22 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DOE78_07620 84fa56c0ec136e792ed10769cbc60bc9 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 1.6E-28 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_07620 84fa56c0ec136e792ed10769cbc60bc9 57 Pfam PF01783 Ribosomal L32p protein family 2 56 6.3E-28 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_07620 84fa56c0ec136e792ed10769cbc60bc9 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.202 T 01-11-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_21825 1f4cbd7a391f664dbfa0946831bbba0a 272 Pfam PF00494 Squalene/phytoene synthase 14 207 4.1E-23 T 01-11-2018 DOE78_21825 1f4cbd7a391f664dbfa0946831bbba0a 272 Gene3D G3DSA:1.10.600.10 3 271 8.6E-57 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_21825 1f4cbd7a391f664dbfa0946831bbba0a 272 SUPERFAMILY SSF48576 11 255 7.34E-42 T 01-11-2018 IPR008949 Isoprenoid synthase domain superfamily DOE78_19030 467dab3c2aafc40097b297cf4699159a 89 SUPERFAMILY SSF52833 4 83 2.9E-15 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_19030 467dab3c2aafc40097b297cf4699159a 89 Gene3D G3DSA:3.40.30.10 1 85 5.0E-13 T 01-11-2018 DOE78_19030 467dab3c2aafc40097b297cf4699159a 89 Pfam PF13192 Thioredoxin domain 5 82 2.9E-7 T 01-11-2018 IPR012336 Thioredoxin-like fold DOE78_17560 14bf6fc141723cc2211ad68ddba9dc7c 248 Pfam PF13649 Methyltransferase domain 41 135 6.8E-17 T 01-11-2018 DOE78_17560 14bf6fc141723cc2211ad68ddba9dc7c 248 Gene3D G3DSA:2.20.25.110 143 206 1.5E-78 T 01-11-2018 DOE78_17560 14bf6fc141723cc2211ad68ddba9dc7c 248 Gene3D G3DSA:3.40.50.150 5 244 1.5E-78 T 01-11-2018 DOE78_17560 14bf6fc141723cc2211ad68ddba9dc7c 248 SUPERFAMILY SSF53335 3 246 5.67E-47 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_20005 a5e0513f2f1cdf8341923323edd08d41 425 Pfam PF08666 SAF domain 330 395 3.3E-9 T 01-11-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DOE78_20005 a5e0513f2f1cdf8341923323edd08d41 425 Gene3D G3DSA:3.40.50.720 10 162 9.9E-18 T 01-11-2018 DOE78_20005 a5e0513f2f1cdf8341923323edd08d41 425 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 17 114 5.9E-7 T 01-11-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_20005 a5e0513f2f1cdf8341923323edd08d41 425 SMART SM00858 329 395 1.2E-7 T 01-11-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DOE78_20005 a5e0513f2f1cdf8341923323edd08d41 425 SUPERFAMILY SSF51735 16 121 5.78E-17 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_16820 872105634aa47353c84e91f777051b70 428 Gene3D G3DSA:2.30.42.10 135 213 8.6E-14 T 01-11-2018 DOE78_16820 872105634aa47353c84e91f777051b70 428 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 5 417 1.5E-174 T 01-11-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B DOE78_16820 872105634aa47353c84e91f777051b70 428 SMART SM00228 118 187 6.6E-5 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_16820 872105634aa47353c84e91f777051b70 428 Pfam PF05580 SpoIVB peptidase S55 204 412 1.1E-86 T 01-11-2018 IPR008763 Peptidase S55, SpoIVB DOE78_16820 872105634aa47353c84e91f777051b70 428 Pfam PF13180 PDZ domain 136 191 1.5E-7 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_16820 872105634aa47353c84e91f777051b70 428 SUPERFAMILY SSF50494 327 411 4.39E-6 T 01-11-2018 IPR009003 Peptidase S1, PA clan DOE78_16820 872105634aa47353c84e91f777051b70 428 SUPERFAMILY SSF50156 132 196 3.55E-11 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 TIGRFAM TIGR01696 deoB: phosphopentomutase 7 387 1.0E-207 T 01-11-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 Hamap MF_00740 Phosphopentomutase [deoB]. 5 389 56.063 T 01-11-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 Gene3D G3DSA:3.40.720.10 6 389 2.2E-175 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 SUPERFAMILY SSF53649 4 392 9.29E-77 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 SUPERFAMILY SSF143856 102 218 3.01E-51 T 01-11-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 Gene3D G3DSA:3.30.70.1250 100 218 2.2E-175 T 01-11-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 Pfam PF01676 Metalloenzyme superfamily 6 380 4.1E-44 T 01-11-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DOE78_16445 2f2a1f198d9b37b17ecc1a693062db75 393 PIRSF PIRSF001491 4 393 2.5E-168 T 01-11-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DOE78_12025 b0de506ab8bd480f730bc617a7042a24 253 Gene3D G3DSA:3.40.50.300 1 253 3.1E-76 T 01-11-2018 DOE78_12025 b0de506ab8bd480f730bc617a7042a24 253 SUPERFAMILY SSF52540 3 249 5.33E-66 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12025 b0de506ab8bd480f730bc617a7042a24 253 Pfam PF00005 ABC transporter 20 178 1.5E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_12025 b0de506ab8bd480f730bc617a7042a24 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_12025 b0de506ab8bd480f730bc617a7042a24 253 SMART SM00382 29 227 1.6E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_19195 dca7698d84c3f9698676063983dfee0a 272 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 190 207 - T 01-11-2018 IPR000540 Flagellar motor protein MotA, conserved site DOE78_19195 dca7698d84c3f9698676063983dfee0a 272 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 219 3.9E-24 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 Gene3D G3DSA:3.50.50.60 290 488 1.7E-16 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 SUPERFAMILY SSF46548 2 163 2.93E-34 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 Gene3D G3DSA:1.10.1060.10 8 151 3.1E-19 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 475 7.6E-25 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 140 2.1E-20 T 01-11-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 2.6E-26 T 01-11-2018 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 2.6E-26 T 01-11-2018 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 2.6E-26 T 01-11-2018 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 2.6E-26 T 01-11-2018 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 Gene3D G3DSA:3.50.50.60 152 285 1.6E-34 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 SUPERFAMILY SSF51971 152 421 6.83E-61 T 01-11-2018 DOE78_12260 819fd4d405e3e2a4a8dc40bd0f37bdd8 488 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 8.4E-240 T 01-11-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 SUPERFAMILY SSF143437 3 173 1.55E-49 T 01-11-2018 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 374 2.8E-126 T 01-11-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 403 155.812 T 01-11-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 SUPERFAMILY SSF52402 174 387 7.5E-51 T 01-11-2018 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 SMART SM00981 74 165 2.3E-20 T 01-11-2018 IPR004114 THUMP domain GO:0003723 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 372 5.7E-67 T 01-11-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 Gene3D G3DSA:3.40.50.620 175 402 6.1E-73 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 Gene3D G3DSA:3.30.2130.30 1 174 3.7E-55 T 01-11-2018 DOE78_18655 6d2ac96f8e051b38d759b4a6dc8421fa 403 Pfam PF02926 THUMP domain 44 164 1.7E-18 T 01-11-2018 IPR004114 THUMP domain GO:0003723 DOE78_08735 d06b4946eb382536041861dd22a01af5 155 Pfam PF07301 Protein of unknown function (DUF1453) 5 147 4.0E-58 T 01-11-2018 IPR009916 Protein of unknown function DUF1453 DOE78_08735 d06b4946eb382536041861dd22a01af5 155 PIRSF PIRSF021441 1 155 2.6E-64 T 01-11-2018 IPR031306 CcdC protein DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 Pfam PF01593 Flavin containing amine oxidoreductase 29 454 2.9E-62 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 SUPERFAMILY SSF51905 19 455 2.07E-63 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 Gene3D G3DSA:3.50.50.60 21 454 9.5E-143 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 Gene3D G3DSA:1.10.405.10 121 212 9.5E-143 T 01-11-2018 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 SUPERFAMILY SSF54373 299 405 2.68E-27 T 01-11-2018 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 Gene3D G3DSA:3.90.660.10 57 407 9.5E-143 T 01-11-2018 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 PRINTS PR00757 Flavin-containing amine oxidase signature 406 428 8.4E-29 T 01-11-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 PRINTS PR00757 Flavin-containing amine oxidase signature 302 321 8.4E-29 T 01-11-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 PRINTS PR00757 Flavin-containing amine oxidase signature 385 404 8.4E-29 T 01-11-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 PRINTS PR00757 Flavin-containing amine oxidase signature 21 40 8.4E-29 T 01-11-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 PRINTS PR00757 Flavin-containing amine oxidase signature 187 208 8.4E-29 T 01-11-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DOE78_02805 4a76af6aad1bcc623bae153207a7a62d 457 PRINTS PR00757 Flavin-containing amine oxidase signature 437 454 8.4E-29 T 01-11-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 Pfam PF13414 TPR repeat 41 81 2.0E-8 T 01-11-2018 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 SUPERFAMILY SSF48452 5 204 1.4E-39 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 SMART SM00028 102 135 13.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 SMART SM00028 136 169 0.0095 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 SMART SM00028 4 33 220.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 SMART SM00028 170 203 4.0E-7 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 SMART SM00028 68 101 0.85 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 SMART SM00028 34 67 2.9E-4 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 Gene3D G3DSA:1.25.40.10 22 216 5.1E-54 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 Pfam PF13432 Tetratricopeptide repeat 112 159 1.5E-4 T 01-11-2018 DOE78_17725 dff3cce8c309c855a6fc6db93a3643ad 216 Pfam PF00515 Tetratricopeptide repeat 170 203 6.0E-9 T 01-11-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 DOE78_03040 028c02e3e74a833d29104f7faf6ed67a 100 Gene3D G3DSA:3.30.1360.20 4 100 7.8E-29 T 01-11-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DOE78_03040 028c02e3e74a833d29104f7faf6ed67a 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 94 6.0E-22 T 01-11-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DOE78_03040 028c02e3e74a833d29104f7faf6ed67a 100 SUPERFAMILY SSF55248 3 97 4.45E-26 T 01-11-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DOE78_03670 705068505ee7ce75324323e40ffb1c41 493 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 28 479 7.2E-148 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_03670 705068505ee7ce75324323e40ffb1c41 493 PIRSF PIRSF005690 14 493 6.5E-141 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 Pfam PF02040 Arsenical pump membrane protein 6 428 5.0E-232 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 6 430 1.1E-228 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_22390 d8c4f61253b22a47e5ed2f80b286ee01 432 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 2.3E-113 T 01-11-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DOE78_07735 f248177f4c5618bb3ba35213d26d609e 212 Pfam PF05949 Bacterial protein of unknown function (DUF881) 75 208 7.0E-36 T 01-11-2018 IPR010273 Protein of unknown function DUF881 DOE78_07735 f248177f4c5618bb3ba35213d26d609e 212 Gene3D G3DSA:3.30.70.1880 74 211 2.8E-33 T 01-11-2018 DOE78_05925 06871a83bf3c229e59b49694612d2bf6 139 PRINTS PR00332 Histidine triad family signature 26 44 2.6E-17 T 01-11-2018 IPR001310 Histidine triad (HIT) protein DOE78_05925 06871a83bf3c229e59b49694612d2bf6 139 PRINTS PR00332 Histidine triad family signature 93 103 2.6E-17 T 01-11-2018 IPR001310 Histidine triad (HIT) protein DOE78_05925 06871a83bf3c229e59b49694612d2bf6 139 PRINTS PR00332 Histidine triad family signature 5 21 2.6E-17 T 01-11-2018 IPR001310 Histidine triad (HIT) protein DOE78_05925 06871a83bf3c229e59b49694612d2bf6 139 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 01-11-2018 IPR019808 Histidine triad, conserved site DOE78_05925 06871a83bf3c229e59b49694612d2bf6 139 Pfam PF01230 HIT domain 12 106 6.3E-27 T 01-11-2018 IPR001310 Histidine triad (HIT) protein DOE78_05925 06871a83bf3c229e59b49694612d2bf6 139 Gene3D G3DSA:3.30.428.10 1 139 7.7E-51 T 01-11-2018 IPR036265 HIT-like superfamily DOE78_05925 06871a83bf3c229e59b49694612d2bf6 139 SUPERFAMILY SSF54197 2 136 1.7E-46 T 01-11-2018 IPR036265 HIT-like superfamily DOE78_03580 a1f0a10fa5d24bda9d97e70c7a09c330 163 Pfam PF07308 Protein of unknown function (DUF1456) 96 163 1.1E-22 T 01-11-2018 IPR009921 Domain of unknown function DUF1456 DOE78_03580 a1f0a10fa5d24bda9d97e70c7a09c330 163 Pfam PF07308 Protein of unknown function (DUF1456) 3 75 3.4E-28 T 01-11-2018 IPR009921 Domain of unknown function DUF1456 DOE78_07230 5934432b2d62551cb559c509ff756e18 254 Gene3D G3DSA:3.40.50.720 1 253 2.2E-79 T 01-11-2018 DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.4E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.4E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 4.4E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.4E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.4E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.4E-36 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 SUPERFAMILY SSF51735 3 249 1.39E-80 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.5E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_07230 5934432b2d62551cb559c509ff756e18 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 2.4E-57 T 01-11-2018 DOE78_02545 24de61f7d7a1b3ee651c183fde5ef935 1005 SUPERFAMILY SSF48208 531 960 2.24E-39 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_02545 24de61f7d7a1b3ee651c183fde5ef935 1005 Gene3D G3DSA:2.60.40.10 32 142 3.4E-33 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_02545 24de61f7d7a1b3ee651c183fde5ef935 1005 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 529 890 5.5E-91 T 01-11-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DOE78_02545 24de61f7d7a1b3ee651c183fde5ef935 1005 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 182 349 3.0E-43 T 01-11-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal DOE78_02545 24de61f7d7a1b3ee651c183fde5ef935 1005 PIRSF PIRSF010631 5 1005 9.7E-253 T 01-11-2018 IPR016007 Alpha-L-rhamnosidase DOE78_02545 24de61f7d7a1b3ee651c183fde5ef935 1005 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 415 513 5.7E-26 T 01-11-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain DOE78_02545 24de61f7d7a1b3ee651c183fde5ef935 1005 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 892 969 1.3E-23 T 01-11-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain DOE78_20645 dedbf3a4ab7fc4e7b49f5684e92c0a32 456 Pfam PF02378 Phosphotransferase system, EIIC 26 369 7.5E-46 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_20645 dedbf3a4ab7fc4e7b49f5684e92c0a32 456 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 444 1.3E-111 T 01-11-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DOE78_20645 dedbf3a4ab7fc4e7b49f5684e92c0a32 456 PIRSF PIRSF006351 1 451 2.9E-124 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_00210 1f25d5136de554400a4fa71efeb8728a 335 Gene3D G3DSA:3.40.50.300 10 171 6.7E-52 T 01-11-2018 DOE78_00210 1f25d5136de554400a4fa71efeb8728a 335 Pfam PF13177 DNA polymerase III, delta subunit 12 171 7.8E-57 T 01-11-2018 DOE78_00210 1f25d5136de554400a4fa71efeb8728a 335 SUPERFAMILY SSF52540 11 198 2.66E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_00210 1f25d5136de554400a4fa71efeb8728a 335 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 199 1.2E-60 T 01-11-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_17425 013709406ca549e6556f1480e6832ef8 94 Pfam PF07873 YabP family 28 91 2.3E-17 T 01-11-2018 IPR022476 Sporulation protein YabP/YqfC DOE78_17425 013709406ca549e6556f1480e6832ef8 94 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 9 92 1.5E-36 T 01-11-2018 IPR022477 Sporulation protein YqfC DOE78_21390 86779941d16125dc48248e1f7bcd0cee 110 Gene3D G3DSA:1.20.58.1000 8 109 2.1E-30 T 01-11-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily DOE78_21390 86779941d16125dc48248e1f7bcd0cee 110 Pfam PF02583 Metal-sensitive transcriptional repressor 28 106 1.6E-27 T 01-11-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DOE78_14490 ee1fe6e188633c965706c067ede72e0d 282 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 162 172 - T 01-11-2018 IPR024002 Formate/nitrite transporter, conserved site DOE78_14490 ee1fe6e188633c965706c067ede72e0d 282 Pfam PF01226 Formate/nitrite transporter 21 253 7.1E-67 T 01-11-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DOE78_14490 ee1fe6e188633c965706c067ede72e0d 282 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 78 87 - T 01-11-2018 IPR024002 Formate/nitrite transporter, conserved site DOE78_14490 ee1fe6e188633c965706c067ede72e0d 282 Gene3D G3DSA:1.20.1080.10 3 266 2.0E-79 T 01-11-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DOE78_19555 d4d219e670a99de3da8f1551fcb60ed2 188 Gene3D G3DSA:3.40.1050.10 1 182 2.5E-46 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DOE78_19555 d4d219e670a99de3da8f1551fcb60ed2 188 SMART SM00947 26 182 5.4E-36 T 01-11-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DOE78_19555 d4d219e670a99de3da8f1551fcb60ed2 188 SUPERFAMILY SSF53056 3 184 1.18E-41 T 01-11-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DOE78_19555 d4d219e670a99de3da8f1551fcb60ed2 188 Pfam PF00484 Carbonic anhydrase 34 177 5.4E-18 T 01-11-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 SUPERFAMILY SSF52540 3 197 1.17E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 Gene3D G3DSA:3.40.50.300 1 211 2.4E-63 T 01-11-2018 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 191 2.2E-41 T 01-11-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 Hamap MF_00551 Uridine kinase [udk]. 2 206 41.046 T 01-11-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 TIGRFAM TIGR00235 udk: uridine kinase 3 206 1.1E-89 T 01-11-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 PRINTS PR00988 Uridine kinase signature 35 46 9.9E-35 T 01-11-2018 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 PRINTS PR00988 Uridine kinase signature 80 95 9.9E-35 T 01-11-2018 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 PRINTS PR00988 Uridine kinase signature 150 161 9.9E-35 T 01-11-2018 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 PRINTS PR00988 Uridine kinase signature 136 146 9.9E-35 T 01-11-2018 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 PRINTS PR00988 Uridine kinase signature 172 185 9.9E-35 T 01-11-2018 DOE78_17655 dca2f49791ab2b45d657f4866674fb17 211 PRINTS PR00988 Uridine kinase signature 5 22 9.9E-35 T 01-11-2018 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 SUPERFAMILY SSF53822 60 308 1.23E-58 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 Gene3D G3DSA:1.10.260.40 1 59 9.9E-23 T 01-11-2018 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.4E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.4E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 Gene3D G3DSA:3.40.50.2300 62 303 9.1E-63 T 01-11-2018 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 SMART SM00354 1 71 1.1E-27 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 Pfam PF13377 Periplasmic binding protein-like domain 163 310 1.7E-28 T 01-11-2018 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 01-11-2018 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 Gene3D G3DSA:3.40.50.2300 154 282 9.1E-63 T 01-11-2018 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 SUPERFAMILY SSF47413 1 58 2.77E-17 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_22655 a1baacb314c8f1de479d6768c7a37735 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.7E-19 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 294 306 - T 01-11-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 Gene3D G3DSA:3.90.230.10 138 365 6.5E-85 T 01-11-2018 DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 SUPERFAMILY SSF55920 137 364 1.57E-82 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 138 2.9E-24 T 01-11-2018 IPR000587 Creatinase, N-terminal GO:0016787 DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 209 2.1E-8 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 316 328 2.1E-8 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 218 234 2.1E-8 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 Pfam PF00557 Metallopeptidase family M24 146 347 2.1E-66 T 01-11-2018 IPR000994 Peptidase M24 DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 SUPERFAMILY SSF53092 3 136 1.92E-32 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE78_18545 b75a19d796e9487a4ba2269d0fcdbcef 365 Gene3D G3DSA:3.40.350.10 1 137 6.6E-36 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE78_23030 36177fb69d01511784bfd787da2bae8b 725 Gene3D G3DSA:3.40.50.12090 87 180 4.9E-5 T 01-11-2018 DOE78_23030 36177fb69d01511784bfd787da2bae8b 725 Pfam PF04122 Putative cell wall binding repeat 2 162 245 1.3E-17 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23030 36177fb69d01511784bfd787da2bae8b 725 Pfam PF04122 Putative cell wall binding repeat 2 63 150 3.4E-18 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23030 36177fb69d01511784bfd787da2bae8b 725 Pfam PF04122 Putative cell wall binding repeat 2 254 340 4.4E-18 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23030 36177fb69d01511784bfd787da2bae8b 725 Pfam PF08486 Stage II sporulation protein 422 502 3.7E-20 T 01-11-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal DOE78_23030 36177fb69d01511784bfd787da2bae8b 725 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 422 723 5.8E-64 T 01-11-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 SUPERFAMILY SSF49373 873 957 7.14E-6 T 01-11-2018 IPR008964 Invasin/intimin cell-adhesion fragments DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 SUPERFAMILY SSF49899 701 866 8.7E-35 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 1166 1235 8.5E-10 T 01-11-2018 IPR000772 Ricin B, lectin domain DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Gene3D G3DSA:2.80.10.50 1131 1254 5.4E-12 T 01-11-2018 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 SMART SM00640 388 826 8.5E-129 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 SUPERFAMILY SSF50370 1136 1253 2.87E-15 T 01-11-2018 IPR035992 Ricin B-like lectins DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 SMART SM00635 872 954 1.3E-4 T 01-11-2018 IPR003343 Bacterial Ig-like, group 2 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Gene3D G3DSA:2.60.120.560 211 371 4.5E-20 T 01-11-2018 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Gene3D G3DSA:2.60.120.560 960 1122 9.0E-38 T 01-11-2018 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Gene3D G3DSA:2.60.120.560 49 210 1.1E-29 T 01-11-2018 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 704 860 9.4E-38 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 SUPERFAMILY SSF75005 378 702 6.5E-87 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Gene3D G3DSA:2.60.120.560 705 864 9.5E-46 T 01-11-2018 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Gene3D G3DSA:2.60.40.1080 874 959 5.7E-9 T 01-11-2018 DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 388 701 1.7E-72 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Gene3D G3DSA:2.115.10.20 377 703 1.2E-101 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 SUPERFAMILY SSF49899 973 1114 2.6E-5 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_21750 16f84aa40bbcb21bd076c03b2ec00854 1260 Pfam PF06439 Domain of Unknown Function (DUF1080) 957 1122 1.1E-11 T 01-11-2018 IPR010496 Domain of unknown function DUF1080 DOE78_13855 1580e3c175cbe4cf2b453fc764f72c1e 637 TIGRFAM TIGR03693 ocin_ThiF_like: putative thiazole-containing bacteriocin maturation protein 2 634 1.5E-232 T 01-11-2018 IPR022368 Putative thiazole-containing bacteriocin maturation protein DOE78_13855 1580e3c175cbe4cf2b453fc764f72c1e 637 Gene3D G3DSA:3.40.50.720 161 331 3.4E-15 T 01-11-2018 DOE78_21765 096a2ce3b9515379840ec8c51e1e1a4f 534 SUPERFAMILY SSF53850 20 533 1.39E-89 T 01-11-2018 DOE78_21765 096a2ce3b9515379840ec8c51e1e1a4f 534 Pfam PF13416 Bacterial extracellular solute-binding protein 70 376 3.2E-11 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_21765 096a2ce3b9515379840ec8c51e1e1a4f 534 Gene3D G3DSA:3.40.190.10 70 436 5.9E-130 T 01-11-2018 DOE78_21765 096a2ce3b9515379840ec8c51e1e1a4f 534 Gene3D G3DSA:3.40.190.10 177 531 5.9E-130 T 01-11-2018 DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 Pfam PF01747 ATP-sulfurylase 163 373 1.9E-95 T 01-11-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 Gene3D G3DSA:3.10.400.10 4 154 1.3E-45 T 01-11-2018 DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 6 373 5.6E-137 T 01-11-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 SUPERFAMILY SSF88697 5 158 4.18E-45 T 01-11-2018 IPR015947 PUA-like superfamily DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 21 377 49.15 T 01-11-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 SUPERFAMILY SSF52374 163 377 1.28E-88 T 01-11-2018 DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 Pfam PF14306 PUA-like domain 5 154 5.0E-47 T 01-11-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DOE78_00710 a52cad16370bede4b61b098c4e009d17 382 Gene3D G3DSA:3.40.50.620 163 375 7.5E-98 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_16720 bd966ad7602ed3087b3bcc071a6faa33 171 Pfam PF03734 L,D-transpeptidase catalytic domain 30 152 2.0E-20 T 01-11-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DOE78_16720 bd966ad7602ed3087b3bcc071a6faa33 171 SUPERFAMILY SSF141523 27 152 1.11E-29 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like DOE78_16720 bd966ad7602ed3087b3bcc071a6faa33 171 Gene3D G3DSA:2.40.440.10 14 169 1.0E-37 T 01-11-2018 IPR038063 L,D-transpeptidase catalytic domain-like DOE78_20945 1696a098c73fe9cf80ba5c1786b0288b 127 SUPERFAMILY SSF140663 3 99 4.58E-30 T 01-11-2018 IPR023203 TTHA0068-like superfamily DOE78_20945 1696a098c73fe9cf80ba5c1786b0288b 127 Gene3D G3DSA:1.10.3450.10 6 119 2.3E-20 T 01-11-2018 DOE78_20945 1696a098c73fe9cf80ba5c1786b0288b 127 Pfam PF03745 Domain of unknown function (DUF309) 10 64 7.9E-19 T 01-11-2018 IPR005500 Protein of unknown function DUF309 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 Gene3D G3DSA:3.30.870.10 223 399 3.1E-26 T 01-11-2018 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 SUPERFAMILY SSF56024 37 232 6.91E-45 T 01-11-2018 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 Gene3D G3DSA:3.30.870.10 39 222 5.2E-43 T 01-11-2018 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 Pfam PF13091 PLD-like domain 243 366 1.0E-25 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 Pfam PF13091 PLD-like domain 60 201 5.4E-12 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 SUPERFAMILY SSF56024 193 374 4.71E-36 T 01-11-2018 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 SMART SM00155 313 340 8.5E-5 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 SMART SM00155 141 168 2.8E-4 T 01-11-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DOE78_23885 1fddd33ab2ef02e47088fbb567171704 400 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 37 397 1.9E-93 T 01-11-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DOE78_22280 91997ec0f245ac723d8bcbfe942bb6ce 139 PRINTS PR01438 Universal stress protein signature 99 111 5.3E-23 T 01-11-2018 IPR006015 Universal stress protein A DOE78_22280 91997ec0f245ac723d8bcbfe942bb6ce 139 PRINTS PR01438 Universal stress protein signature 117 139 5.3E-23 T 01-11-2018 IPR006015 Universal stress protein A DOE78_22280 91997ec0f245ac723d8bcbfe942bb6ce 139 PRINTS PR01438 Universal stress protein signature 2 20 5.3E-23 T 01-11-2018 IPR006015 Universal stress protein A DOE78_22280 91997ec0f245ac723d8bcbfe942bb6ce 139 Gene3D G3DSA:3.40.50.620 1 139 1.7E-38 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_22280 91997ec0f245ac723d8bcbfe942bb6ce 139 SUPERFAMILY SSF52402 2 139 4.27E-34 T 01-11-2018 DOE78_22280 91997ec0f245ac723d8bcbfe942bb6ce 139 Pfam PF00582 Universal stress protein family 2 139 2.6E-34 T 01-11-2018 IPR006016 UspA DOE78_13015 523332b26a51421e6ddce52d8de82cd5 477 Pfam PF05893 Acyl-CoA reductase (LuxC) 53 458 1.7E-104 T 01-11-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 DOE78_13015 523332b26a51421e6ddce52d8de82cd5 477 SUPERFAMILY SSF53720 154 324 2.55E-5 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_13015 523332b26a51421e6ddce52d8de82cd5 477 PIRSF PIRSF009414 15 474 7.4E-97 T 01-11-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 DOE78_05810 c2735dddc31f706b19fac118dd20ab27 370 Pfam PF04286 Protein of unknown function (DUF445) 3 369 2.0E-82 T 01-11-2018 IPR007383 Protein of unknown function DUF445 DOE78_05810 c2735dddc31f706b19fac118dd20ab27 370 PIRSF PIRSF032178 1 370 3.1E-123 T 01-11-2018 IPR016991 Protein of unknown function UCP032178 DOE78_10635 1e1b67b53c53b8fe07e9bb6fa7a07b12 383 Gene3D G3DSA:1.20.1250.20 6 180 1.1E-14 T 01-11-2018 DOE78_10635 1e1b67b53c53b8fe07e9bb6fa7a07b12 383 Pfam PF12832 MFS_1 like family 6 355 1.2E-44 T 01-11-2018 IPR024989 Major facilitator superfamily associated domain DOE78_10635 1e1b67b53c53b8fe07e9bb6fa7a07b12 383 SUPERFAMILY SSF103473 7 380 4.58E-36 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_10635 1e1b67b53c53b8fe07e9bb6fa7a07b12 383 Gene3D G3DSA:1.20.1250.20 194 382 5.1E-30 T 01-11-2018 DOE78_10635 1e1b67b53c53b8fe07e9bb6fa7a07b12 383 PIRSF PIRSF004925 1 382 4.0E-78 T 01-11-2018 IPR026032 Probable 3-phenylpropionic acid transporter DOE78_17895 8dfa5ec7a5ef23bdbc9c62f202010e2a 385 Pfam PF00266 Aminotransferase class-V 3 361 2.6E-68 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_17895 8dfa5ec7a5ef23bdbc9c62f202010e2a 385 SUPERFAMILY SSF53383 2 372 6.18E-89 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_17895 8dfa5ec7a5ef23bdbc9c62f202010e2a 385 PIRSF PIRSF005572 1 377 3.8E-111 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DOE78_17895 8dfa5ec7a5ef23bdbc9c62f202010e2a 385 Gene3D G3DSA:3.40.640.10 13 252 9.8E-114 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_17895 8dfa5ec7a5ef23bdbc9c62f202010e2a 385 Gene3D G3DSA:3.90.1150.10 3 368 9.8E-114 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 326 36.209 T 01-11-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 Gene3D G3DSA:3.30.930.10 69 277 2.3E-64 T 01-11-2018 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 SUPERFAMILY SSF46785 2 61 6.56E-10 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 SUPERFAMILY SSF55681 73 277 1.16E-57 T 01-11-2018 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 Gene3D G3DSA:1.10.10.10 1 65 9.1E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 Pfam PF08279 HTH domain 7 60 8.3E-15 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 214 1.2E-18 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 Gene3D G3DSA:2.30.30.100 280 325 2.7E-9 T 01-11-2018 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 86 325 4.6E-72 T 01-11-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_15955 86e20268b6ab901c2596d3e8cf1685f9 326 Pfam PF02237 Biotin protein ligase C terminal domain 280 325 9.1E-10 T 01-11-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DOE78_15860 557fb55540ebe3b76809d43d65f77901 153 Pfam PF14179 YppG-like protein 48 151 1.8E-30 T 01-11-2018 IPR025555 YppG-like protein DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 Pfam PF00361 Proton-conducting membrane transporter 129 419 9.9E-69 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 800 0.0 T 01-11-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 Pfam PF13244 Domain of unknown function (DUF4040) 637 702 5.5E-22 T 01-11-2018 IPR025383 Domain of unknown function DUF4040 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 1.7E-46 T 01-11-2018 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 1.7E-46 T 01-11-2018 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 436 455 1.7E-46 T 01-11-2018 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.7E-46 T 01-11-2018 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 1.7E-46 T 01-11-2018 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.7E-46 T 01-11-2018 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 1.7E-46 T 01-11-2018 DOE78_20850 26530cfe461e0ad12ac1faac854ae12b 801 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 116 1.8E-11 T 01-11-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_02730 3ab422364e1ce14f43ed759ae7a11892 92 PRINTS PR00107 Phosphocarrier protein signature 12 28 9.8E-9 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_02730 3ab422364e1ce14f43ed759ae7a11892 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 9.8E-9 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_02730 3ab422364e1ce14f43ed759ae7a11892 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 9.8E-9 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_02730 3ab422364e1ce14f43ed759ae7a11892 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 85 5.0E-21 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_02730 3ab422364e1ce14f43ed759ae7a11892 92 Pfam PF00381 PTS HPr component phosphorylation site 3 85 3.7E-16 T 01-11-2018 IPR000032 Phosphocarrier protein HPr-like DOE78_02730 3ab422364e1ce14f43ed759ae7a11892 92 SUPERFAMILY SSF55594 1 86 4.84E-17 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_02730 3ab422364e1ce14f43ed759ae7a11892 92 Gene3D G3DSA:3.30.1340.10 1 91 1.7E-23 T 01-11-2018 IPR035895 HPr-like superfamily DOE78_04825 124e82c71f1c341bf0a9425eaaae6b17 255 SUPERFAMILY SSF53335 9 207 1.98E-40 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_04825 124e82c71f1c341bf0a9425eaaae6b17 255 Gene3D G3DSA:3.40.50.150 22 255 2.3E-64 T 01-11-2018 DOE78_04825 124e82c71f1c341bf0a9425eaaae6b17 255 Pfam PF08241 Methyltransferase domain 43 132 5.7E-21 T 01-11-2018 IPR013216 Methyltransferase type 11 GO:0008168 DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 SMART SM00862 148 223 7.5E-16 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 SUPERFAMILY SSF46894 132 222 5.39E-23 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 5.2E-22 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 SUPERFAMILY SSF52172 1 126 2.13E-35 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 SMART SM00448 2 112 3.6E-31 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 Gene3D G3DSA:3.40.50.2300 2 128 3.5E-30 T 01-11-2018 DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 Pfam PF00072 Response regulator receiver domain 4 113 6.9E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02795 1d524a2b9cd7355d4dd1629296ca7289 230 Gene3D G3DSA:1.10.10.10 129 228 3.0E-24 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09125 563783be4f73569fdea0e5427a7a444a 355 Pfam PF03060 Nitronate monooxygenase 6 345 2.4E-100 T 01-11-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DOE78_09125 563783be4f73569fdea0e5427a7a444a 355 SUPERFAMILY SSF51412 4 346 9.62E-67 T 01-11-2018 DOE78_09125 563783be4f73569fdea0e5427a7a444a 355 Gene3D G3DSA:3.20.20.70 3 353 7.4E-119 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 Gene3D G3DSA:2.10.109.10 39 170 2.7E-34 T 01-11-2018 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 SUPERFAMILY SSF51306 28 178 3.66E-47 T 01-11-2018 IPR036286 LexA/Signal peptidase-like superfamily DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 15 172 1.0E-49 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 Pfam PF00717 Peptidase S24-like 37 100 5.0E-16 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 ProSitePatterns PS00760 Signal peptidases I lysine active site. 79 91 - T 01-11-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 ProSitePatterns PS00501 Signal peptidases I serine active site. 39 46 - T 01-11-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 ProSitePatterns PS00761 Signal peptidases I signature 3. 136 149 - T 01-11-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 2.6E-24 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 89 2.6E-24 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_03080 e035bdf7d31ff90163e6c870f646db6e 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 131 150 2.6E-24 T 01-11-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 Gene3D G3DSA:3.40.50.720 1 170 5.6E-74 T 01-11-2018 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 SUPERFAMILY SSF51735 3 168 6.57E-58 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 SUPERFAMILY SSF56327 173 437 2.31E-94 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 01-11-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 5.9E-46 T 01-11-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 5.8E-53 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 5.8E-53 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.8E-53 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 5.8E-53 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 5.8E-53 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 5.8E-53 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 5.8E-53 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 Gene3D G3DSA:3.90.110.10 171 442 2.1E-100 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_10950 bdc5c7b3969437bd8094115307f8365e 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.1E-74 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 Pfam PF00271 Helicase conserved C-terminal domain 573 657 1.8E-7 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 TIGRFAM TIGR00595 priA: primosomal protein N' 287 797 6.4E-220 T 01-11-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 SUPERFAMILY SSF52540 258 441 1.21E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 Gene3D G3DSA:1.10.8.630 1 113 2.5E-24 T 01-11-2018 DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 799 25.237 T 01-11-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 SMART SM00490 561 658 1.9E-8 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 Gene3D G3DSA:3.40.50.300 249 444 3.3E-76 T 01-11-2018 DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 SUPERFAMILY SSF52540 530 703 4.53E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 SMART SM00487 259 458 2.1E-26 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_07915 c8fe546d9866d6fe7696a254c829ba83 800 Pfam PF04851 Type III restriction enzyme, res subunit 262 426 1.5E-17 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 Pfam PF07690 Major Facilitator Superfamily 214 382 6.8E-20 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 Pfam PF07690 Major Facilitator Superfamily 16 188 1.7E-26 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 SUPERFAMILY SSF103473 12 379 1.7E-57 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 Gene3D G3DSA:1.20.1250.20 7 379 2.8E-51 T 01-11-2018 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 PRINTS PR01035 Tetracycline resistance protein signature 136 158 6.0E-15 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 PRINTS PR01035 Tetracycline resistance protein signature 272 293 6.0E-15 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 PRINTS PR01035 Tetracycline resistance protein signature 78 102 6.0E-15 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 PRINTS PR01035 Tetracycline resistance protein signature 47 66 6.0E-15 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_20190 f7292d667d5b878a2f05497cce65369f 391 PRINTS PR01035 Tetracycline resistance protein signature 333 356 6.0E-15 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_15355 af342c966ccdd303d6b13677b5a20fbc 87 Pfam PF14191 YodL-like 10 81 8.9E-9 T 01-11-2018 IPR025923 YodL-like DOE78_15355 af342c966ccdd303d6b13677b5a20fbc 87 ProDom PD030115 YODL GK1575 2 86 1.0E-25 T 01-11-2018 DOE78_22755 e52341aa8d11472eb705fa148b8e7beb 362 Pfam PF02810 SEC-C motif 7 24 5.2E-9 T 01-11-2018 IPR004027 SEC-C motif DOE78_22755 e52341aa8d11472eb705fa148b8e7beb 362 SUPERFAMILY SSF103642 5 24 4.09E-7 T 01-11-2018 DOE78_22755 e52341aa8d11472eb705fa148b8e7beb 362 Gene3D G3DSA:3.10.450.50 1 26 1.7E-6 T 01-11-2018 DOE78_06020 b9e7b981b8c21a15b4ba7ad6e4054233 171 Pfam PF03992 Antibiotic biosynthesis monooxygenase 66 140 2.9E-11 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE78_06020 b9e7b981b8c21a15b4ba7ad6e4054233 171 SUPERFAMILY SSF54909 66 167 5.81E-21 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_06020 b9e7b981b8c21a15b4ba7ad6e4054233 171 Gene3D G3DSA:3.30.70.3430 1 168 7.5E-66 T 01-11-2018 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 Pfam PF00154 recA bacterial DNA recombination protein 8 268 6.9E-146 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 SMART SM00382 57 228 6.3E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 Gene3D G3DSA:3.30.250.10 268 345 1.2E-28 T 01-11-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 Gene3D G3DSA:3.40.50.300 26 267 1.7E-80 T 01-11-2018 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.5E-174 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 ProSitePatterns PS00321 recA signature. 213 221 - T 01-11-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 PRINTS PR00142 RecA protein signature 165 194 1.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 PRINTS PR00142 RecA protein signature 93 122 1.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 PRINTS PR00142 RecA protein signature 297 314 1.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 PRINTS PR00142 RecA protein signature 210 238 1.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 PRINTS PR00142 RecA protein signature 243 272 1.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 PRINTS PR00142 RecA protein signature 127 156 1.2E-84 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 SUPERFAMILY SSF52540 3 267 2.01E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 SUPERFAMILY SSF54752 268 327 1.29E-21 T 01-11-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DOE78_08555 b22ae9d511e3d46b89ed471043e95871 349 Hamap MF_00268 Protein RecA [recA]. 5 329 52.973 T 01-11-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DOE78_21340 8730ec4620af66e64d535d1363c0e468 359 Gene3D G3DSA:3.90.1150.10 25 351 8.1E-103 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_21340 8730ec4620af66e64d535d1363c0e468 359 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 351 1.3E-91 T 01-11-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 DOE78_21340 8730ec4620af66e64d535d1363c0e468 359 Pfam PF00155 Aminotransferase class I and II 26 345 4.7E-40 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_21340 8730ec4620af66e64d535d1363c0e468 359 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 211 224 - T 01-11-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DOE78_21340 8730ec4620af66e64d535d1363c0e468 359 SUPERFAMILY SSF53383 21 353 7.66E-70 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_21340 8730ec4620af66e64d535d1363c0e468 359 Gene3D G3DSA:3.40.640.10 37 259 8.1E-103 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 SUPERFAMILY SSF51905 31 385 2.07E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 Gene3D G3DSA:3.50.50.60 34 382 6.2E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 Pfam PF01266 FAD dependent oxidoreductase 34 380 1.3E-37 T 01-11-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 SUPERFAMILY SSF50022 425 508 9.82E-24 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 Gene3D G3DSA:2.102.10.10 410 511 9.3E-25 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 Gene3D G3DSA:3.30.9.10 127 340 6.2E-42 T 01-11-2018 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 PRINTS PR00162 Rieske 2Fe-2S subunit signature 493 505 6.9E-8 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 PRINTS PR00162 Rieske 2Fe-2S subunit signature 460 471 6.9E-8 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 PRINTS PR00162 Rieske 2Fe-2S subunit signature 481 493 6.9E-8 T 01-11-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DOE78_03200 ac6dff2c6b0c997a1688ab0e12495a90 511 Pfam PF00355 Rieske [2Fe-2S] domain 432 508 1.0E-12 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DOE78_22880 910225512a8fcd1edc400040bbe32275 682 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 406 671 2.8E-52 T 01-11-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DOE78_22880 910225512a8fcd1edc400040bbe32275 682 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 1 95 8.9E-24 T 01-11-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DOE78_11500 abfece49129230192012213465a8bd3a 1737 SUPERFAMILY SSF52540 1367 1714 3.3E-27 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11500 abfece49129230192012213465a8bd3a 1737 Gene3D G3DSA:3.40.50.300 1549 1716 1.0E-17 T 01-11-2018 DOE78_11500 abfece49129230192012213465a8bd3a 1737 Gene3D G3DSA:3.40.50.300 1364 1472 9.3E-8 T 01-11-2018 DOE78_11500 abfece49129230192012213465a8bd3a 1737 Pfam PF01935 Domain of unknown function DUF87 1390 1594 3.9E-9 T 01-11-2018 IPR002789 Helicase HerA, central domain DOE78_11500 abfece49129230192012213465a8bd3a 1737 TIGRFAM TIGR03237 dnd_assoc_2: DNA phosphorothioation-dependent restriction protein DptH 2 1295 0.0 T 01-11-2018 IPR017646 DNA phosphorothioation-dependent restriction protein DptH DOE78_04285 88e35ad1f48462077843eaff5281e70b 339 SUPERFAMILY SSF50156 125 191 6.34E-10 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_04285 88e35ad1f48462077843eaff5281e70b 339 SUPERFAMILY SSF54211 167 333 4.17E-17 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_04285 88e35ad1f48462077843eaff5281e70b 339 Pfam PF13180 PDZ domain 127 193 3.2E-11 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_04285 88e35ad1f48462077843eaff5281e70b 339 Gene3D G3DSA:2.30.42.10 122 218 4.9E-24 T 01-11-2018 DOE78_04285 88e35ad1f48462077843eaff5281e70b 339 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 232 331 6.7E-7 T 01-11-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DOE78_16405 abc7adaeca976502931a8fc0d2ddcbd2 140 Pfam PF13782 Stage V sporulation protein AB 27 135 1.5E-35 T 01-11-2018 IPR020144 Stage V sporulation protein AB DOE78_16405 abc7adaeca976502931a8fc0d2ddcbd2 140 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 3 138 7.0E-35 T 01-11-2018 IPR020144 Stage V sporulation protein AB DOE78_01755 aeaf91ec8bd72e4e489a3ff84df570f1 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 189 6.3E-24 T 01-11-2018 DOE78_01755 aeaf91ec8bd72e4e489a3ff84df570f1 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 188 8.6E-18 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_01755 aeaf91ec8bd72e4e489a3ff84df570f1 226 Gene3D G3DSA:3.40.50.1000 5 203 4.5E-67 T 01-11-2018 IPR023214 HAD superfamily DOE78_01755 aeaf91ec8bd72e4e489a3ff84df570f1 226 SUPERFAMILY SSF56784 2 205 1.08E-43 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_01755 aeaf91ec8bd72e4e489a3ff84df570f1 226 Gene3D G3DSA:1.10.150.240 16 94 4.5E-67 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE78_01755 aeaf91ec8bd72e4e489a3ff84df570f1 226 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 4 191 1.0E-78 T 01-11-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 DOE78_01755 aeaf91ec8bd72e4e489a3ff84df570f1 226 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 4 190 2.2E-60 T 01-11-2018 IPR010976 Beta-phosphoglucomutase hydrolase DOE78_06700 e27439c94335ce8428c146ddc0f9e846 245 Pfam PF00149 Calcineurin-like phosphoesterase 1 196 8.2E-12 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_06700 e27439c94335ce8428c146ddc0f9e846 245 Gene3D G3DSA:3.60.21.10 1 242 9.0E-63 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_06700 e27439c94335ce8428c146ddc0f9e846 245 SUPERFAMILY SSF56300 1 224 3.65E-40 T 01-11-2018 DOE78_06700 e27439c94335ce8428c146ddc0f9e846 245 Hamap MF_01443 Bis(5'-nucleosyl)-tetraphosphatase PrpE [asymmetrical] [prpE]. 1 245 57.995 T 01-11-2018 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE GO:0004081|GO:0016151 KEGG: 00230+3.6.1.17|KEGG: 00240+3.6.1.17 DOE78_06150 70d0b3bd82df2aafce4603660e83ba4a 261 Pfam PF00561 alpha/beta hydrolase fold 27 129 2.1E-14 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_06150 70d0b3bd82df2aafce4603660e83ba4a 261 Gene3D G3DSA:3.40.50.1820 7 257 4.1E-44 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06150 70d0b3bd82df2aafce4603660e83ba4a 261 SUPERFAMILY SSF53474 4 257 5.05E-45 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06150 70d0b3bd82df2aafce4603660e83ba4a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 5.3E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_06150 70d0b3bd82df2aafce4603660e83ba4a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 5.3E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_06150 70d0b3bd82df2aafce4603660e83ba4a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 5.3E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_03900 16cfd48ed76280578c8eb7a546007d61 233 Gene3D G3DSA:1.10.30.40 1 49 1.3E-17 T 01-11-2018 DOE78_03900 16cfd48ed76280578c8eb7a546007d61 233 PIRSF PIRSF018982 1 233 1.1E-84 T 01-11-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DOE78_03900 16cfd48ed76280578c8eb7a546007d61 233 Gene3D G3DSA:3.40.50.11240 51 231 2.5E-60 T 01-11-2018 DOE78_03900 16cfd48ed76280578c8eb7a546007d61 233 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 5 231 3.2E-80 T 01-11-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 150.888 T 01-11-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 Gene3D G3DSA:3.30.450.40 1 159 3.3E-71 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 Pfam PF06018 CodY GAF-like domain 3 178 4.1E-83 T 01-11-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 PIRSF PIRSF011572 1 257 2.2E-124 T 01-11-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 Gene3D G3DSA:1.10.10.10 160 259 2.0E-46 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 Pfam PF08222 CodY helix-turn-helix domain 197 257 1.9E-37 T 01-11-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 4.9E-126 T 01-11-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 DOE78_08145 4ef30954fa428bd1c75c6670c9fe9427 259 SUPERFAMILY SSF46785 167 256 1.12E-41 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 SUPERFAMILY SSF103473 5 387 2.88E-76 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 Pfam PF07690 Major Facilitator Superfamily 11 246 1.2E-36 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 Gene3D G3DSA:1.20.1250.20 4 189 1.6E-37 T 01-11-2018 DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 PRINTS PR01035 Tetracycline resistance protein signature 280 304 4.6E-9 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 PRINTS PR01035 Tetracycline resistance protein signature 338 360 4.6E-9 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 PRINTS PR01035 Tetracycline resistance protein signature 249 268 4.6E-9 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 PRINTS PR01035 Tetracycline resistance protein signature 219 235 4.6E-9 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_12920 c605a5cf2d7509860c5bf630bf97579d 402 Gene3D G3DSA:1.20.1250.20 212 401 1.2E-30 T 01-11-2018 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 Gene3D G3DSA:3.30.420.40 146 309 1.3E-128 T 01-11-2018 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 Gene3D G3DSA:3.90.640.10 178 251 1.3E-128 T 01-11-2018 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 4.7E-59 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 4.7E-59 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 4.7E-59 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 4.7E-59 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 4.7E-59 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 SUPERFAMILY SSF53067 3 140 3.54E-39 T 01-11-2018 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 SUPERFAMILY SSF53067 145 324 6.16E-49 T 01-11-2018 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 Gene3D G3DSA:3.30.420.40 6 319 1.3E-128 T 01-11-2018 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 1.1E-138 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_23540 bf69b03f46b38427b1c24bb9d698f07d 333 Pfam PF06723 MreB/Mbl protein 4 327 1.5E-151 T 01-11-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DOE78_16795 e0ee0fd0328500ef980756672b2f0df9 246 Gene3D G3DSA:3.20.20.190 1 241 1.6E-78 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DOE78_16795 e0ee0fd0328500ef980756672b2f0df9 246 SUPERFAMILY SSF51695 2 238 1.2E-70 T 01-11-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DOE78_16795 e0ee0fd0328500ef980756672b2f0df9 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 232 4.9E-45 T 01-11-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DOE78_13845 e53ce2764c1b481b617e740958cc9e00 525 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 63 240 5.9E-46 T 01-11-2018 IPR020051 SagB-type dehydrogenase domain DOE78_13845 e53ce2764c1b481b617e740958cc9e00 525 Gene3D G3DSA:3.40.109.10 23 299 1.7E-53 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_13845 e53ce2764c1b481b617e740958cc9e00 525 Gene3D G3DSA:3.40.109.10 379 518 2.5E-23 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_13845 e53ce2764c1b481b617e740958cc9e00 525 SUPERFAMILY SSF55469 430 518 4.85E-7 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_13845 e53ce2764c1b481b617e740958cc9e00 525 Pfam PF00881 Nitroreductase family 386 511 8.3E-6 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DOE78_23855 87880da20cf28e9ad98e45d1c19a3b33 211 Gene3D G3DSA:1.10.10.60 17 59 2.7E-15 T 01-11-2018 DOE78_23855 87880da20cf28e9ad98e45d1c19a3b33 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 66 2.4E-13 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_23855 87880da20cf28e9ad98e45d1c19a3b33 211 SUPERFAMILY SSF48498 92 205 3.71E-9 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_23855 87880da20cf28e9ad98e45d1c19a3b33 211 SUPERFAMILY SSF46689 18 85 6.48E-16 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_23855 87880da20cf28e9ad98e45d1c19a3b33 211 Gene3D G3DSA:1.10.357.10 61 206 4.5E-19 T 01-11-2018 DOE78_23855 87880da20cf28e9ad98e45d1c19a3b33 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.4E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_23855 87880da20cf28e9ad98e45d1c19a3b33 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.4E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_24060 9653701d262927e0409e5fd2de539490 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 5 221 1.1E-107 T 01-11-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 DOE78_24060 9653701d262927e0409e5fd2de539490 221 Gene3D G3DSA:3.40.50.10320 1 215 2.8E-50 T 01-11-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DOE78_24060 9653701d262927e0409e5fd2de539490 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 137 4.7E-29 T 01-11-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 DOE78_24060 9653701d262927e0409e5fd2de539490 221 SUPERFAMILY SSF102588 5 190 2.35E-49 T 01-11-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 SMART SM00487 256 445 2.4E-35 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 Gene3D G3DSA:2.40.50.140 48 143 6.9E-10 T 01-11-2018 DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 Pfam PF00271 Helicase conserved C-terminal domain 458 575 3.3E-20 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 SUPERFAMILY SSF52540 379 589 5.45E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 SMART SM00490 495 576 1.7E-20 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 SMART SM00490 326 404 0.86 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 Gene3D G3DSA:3.40.50.300 198 437 3.1E-89 T 01-11-2018 DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 30 651 3.7E-249 T 01-11-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 Gene3D G3DSA:3.40.50.300 444 616 6.9E-56 T 01-11-2018 DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 Pfam PF00270 DEAD/DEAH box helicase 261 418 2.7E-19 T 01-11-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 Pfam PF17191 RecG wedge domain 14 164 2.2E-17 T 01-11-2018 IPR033454 RecG, wedge domain DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 SUPERFAMILY SSF52540 177 439 5.77E-63 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07995 64b90ea5970c48aadda24830fbbfcb98 685 SUPERFAMILY SSF50249 3 170 1.16E-27 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_12390 8d040d8f676ffd474fdc1eaca5daa31a 474 Pfam PF00324 Amino acid permease 13 429 8.2E-62 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_12390 8d040d8f676ffd474fdc1eaca5daa31a 474 PIRSF PIRSF006060 1 464 1.6E-58 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_12390 8d040d8f676ffd474fdc1eaca5daa31a 474 Gene3D G3DSA:1.20.1740.10 1 448 3.5E-60 T 01-11-2018 DOE78_18380 dc2a257a693d83d2fa1b1430408e5f70 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.5E-70 T 01-11-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DOE78_18380 dc2a257a693d83d2fa1b1430408e5f70 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 86.719 T 01-11-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DOE78_18380 dc2a257a693d83d2fa1b1430408e5f70 151 Pfam PF03477 ATP cone domain 50 136 2.6E-20 T 01-11-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DOE78_17565 9244856e6afad27aeee8b775f000f2b4 118 SUPERFAMILY SSF81301 1 114 2.78E-40 T 01-11-2018 DOE78_17565 9244856e6afad27aeee8b775f000f2b4 118 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 7.6E-27 T 01-11-2018 DOE78_17565 9244856e6afad27aeee8b775f000f2b4 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 6.3E-36 T 01-11-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DOE78_17565 9244856e6afad27aeee8b775f000f2b4 118 Gene3D G3DSA:3.30.460.10 1 108 1.1E-38 T 01-11-2018 DOE78_17565 9244856e6afad27aeee8b775f000f2b4 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.34 T 01-11-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DOE78_18785 1eb732649f00509a2df4504832d04a6c 321 SUPERFAMILY SSF47090 196 257 1.18E-7 T 01-11-2018 IPR036365 PGBD-like superfamily DOE78_18785 1eb732649f00509a2df4504832d04a6c 321 Gene3D G3DSA:3.40.630.40 1 183 4.1E-47 T 01-11-2018 DOE78_18785 1eb732649f00509a2df4504832d04a6c 321 SMART SM00646 63 176 4.9E-33 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_18785 1eb732649f00509a2df4504832d04a6c 321 Gene3D G3DSA:1.10.101.10 188 260 3.8E-7 T 01-11-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DOE78_18785 1eb732649f00509a2df4504832d04a6c 321 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 175 1.6E-42 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_18785 1eb732649f00509a2df4504832d04a6c 321 SUPERFAMILY SSF53187 1 181 2.39E-44 T 01-11-2018 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 447 3.0E-150 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 PRINTS PR00175 Sodium/alanine symporter signature 416 436 2.7E-57 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 PRINTS PR00175 Sodium/alanine symporter signature 204 223 2.7E-57 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.7E-57 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 PRINTS PR00175 Sodium/alanine symporter signature 295 313 2.7E-57 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.7E-57 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 PRINTS PR00175 Sodium/alanine symporter signature 176 194 2.7E-57 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14905 451c62aa5a4c4c3637625fe3dacd43d2 497 Pfam PF01235 Sodium:alanine symporter family 48 459 5.6E-163 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_20100 715601be79eb296f002eb467c58c9c37 580 Gene3D G3DSA:3.30.565.10 421 578 8.6E-15 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_20100 715601be79eb296f002eb467c58c9c37 580 SUPERFAMILY SSF158472 300 348 2.75E-5 T 01-11-2018 DOE78_20100 715601be79eb296f002eb467c58c9c37 580 SMART SM00387 455 575 0.0018 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_20100 715601be79eb296f002eb467c58c9c37 580 Pfam PF06580 Histidine kinase 364 444 9.2E-27 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_20100 715601be79eb296f002eb467c58c9c37 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 573 6.7E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_20100 715601be79eb296f002eb467c58c9c37 580 Gene3D G3DSA:1.20.1480.50 262 356 1.7E-8 T 01-11-2018 DOE78_20100 715601be79eb296f002eb467c58c9c37 580 SMART SM00304 299 351 2.0E-4 T 01-11-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DOE78_20100 715601be79eb296f002eb467c58c9c37 580 SUPERFAMILY SSF55874 419 572 3.39E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24055 e3aae1eff6694df971053287267584ed 115 SUPERFAMILY SSF89442 1 115 2.35E-52 T 01-11-2018 IPR036492 Hypothetical protein YojF superfamily DOE78_24055 e3aae1eff6694df971053287267584ed 115 Pfam PF08830 Protein of unknown function (DUF1806) 6 114 1.3E-53 T 01-11-2018 IPR014934 Protein of unknown function DUF1806 DOE78_24055 e3aae1eff6694df971053287267584ed 115 Gene3D G3DSA:2.70.180.10 1 115 4.5E-50 T 01-11-2018 IPR036492 Hypothetical protein YojF superfamily DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 Gene3D G3DSA:3.40.50.1000 72 180 3.2E-86 T 01-11-2018 IPR023214 HAD superfamily DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 107 3.7E-29 T 01-11-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 PIRSF PIRSF000915 1 253 9.4E-61 T 01-11-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 228 2.8E-42 T 01-11-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 SUPERFAMILY SSF56784 3 252 3.81E-72 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 1.3E-120 T 01-11-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 Gene3D G3DSA:3.40.50.1000 6 246 3.2E-86 T 01-11-2018 IPR023214 HAD superfamily DOE78_21040 482817c0e55f8bb24a2c297bc1d6fa82 254 Pfam PF13242 HAD-hyrolase-like 179 251 1.3E-21 T 01-11-2018 DOE78_24320 b3ab45644893578648303db3e4173321 108 SUPERFAMILY SSF46973 2 99 5.23E-38 T 01-11-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DOE78_24320 b3ab45644893578648303db3e4173321 108 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 2.3E-38 T 01-11-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DOE78_24320 b3ab45644893578648303db3e4173321 108 Gene3D G3DSA:1.20.58.280 1 104 1.9E-41 T 01-11-2018 DOE78_24320 b3ab45644893578648303db3e4173321 108 PIRSF PIRSF000699 1 105 3.3E-40 T 01-11-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DOE78_23520 168bf17d5bc9b68257691428782246ba 144 Pfam PF07977 FabA-like domain 11 133 4.1E-36 T 01-11-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DOE78_23520 168bf17d5bc9b68257691428782246ba 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 35.049 T 01-11-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DOE78_23520 168bf17d5bc9b68257691428782246ba 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 137 9.9E-59 T 01-11-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DOE78_23520 168bf17d5bc9b68257691428782246ba 144 Gene3D G3DSA:3.10.129.10 1 139 1.2E-60 T 01-11-2018 DOE78_23520 168bf17d5bc9b68257691428782246ba 144 SUPERFAMILY SSF54637 1 137 3.09E-49 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 SUPERFAMILY SSF55874 168 328 1.27E-33 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 260 274 1.2E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 288 1.2E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 1.2E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 1.2E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 SUPERFAMILY SSF47384 103 179 8.83E-14 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 SMART SM00388 112 178 2.1E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 SMART SM00387 223 330 1.1E-19 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 Gene3D G3DSA:3.30.565.10 182 330 3.1E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 230 328 1.7E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 Gene3D G3DSA:1.10.287.130 103 178 6.8E-15 T 01-11-2018 DOE78_02855 abceffdc3247ae75f254b0ecd95a8752 330 Pfam PF00512 His Kinase A (phospho-acceptor) domain 114 178 4.3E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_13970 287a5ab763b0dc49ef3cabd6167476cd 292 Pfam PF01263 Aldose 1-epimerase 2 257 2.3E-28 T 01-11-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DOE78_13970 287a5ab763b0dc49ef3cabd6167476cd 292 SUPERFAMILY SSF74650 1 291 1.07E-52 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_13970 287a5ab763b0dc49ef3cabd6167476cd 292 Gene3D G3DSA:2.70.98.10 1 292 1.4E-96 T 01-11-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 15 323 2.0E-99 T 01-11-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 Gene3D G3DSA:2.60.120.560 340 492 8.8E-35 T 01-11-2018 DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 SUPERFAMILY SSF75005 6 330 7.85E-108 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 Gene3D G3DSA:2.115.10.20 4 333 1.3E-126 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 335 483 8.0E-26 T 01-11-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 SUPERFAMILY SSF49899 332 491 5.38E-27 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 15 28 - T 01-11-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DOE78_21760 47630d45118da1a1d7e67a2f46f96534 493 SMART SM00640 15 451 7.1E-150 T 01-11-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DOE78_13725 5b9980e433bdf06d2bb66e0ba0479c00 271 Pfam PF10997 Alternate to MurJ 15 268 1.7E-85 T 01-11-2018 IPR021260 Lipid II flippase Amj DOE78_13725 5b9980e433bdf06d2bb66e0ba0479c00 271 Hamap MF_02077 Lipid II flippase Amj [amj]. 5 269 25.292 T 01-11-2018 IPR021260 Lipid II flippase Amj DOE78_04605 955cf0810a99943c50178fa66b284381 885 Gene3D G3DSA:3.20.20.450 633 881 8.6E-93 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_04605 955cf0810a99943c50178fa66b284381 885 SUPERFAMILY SSF141868 636 877 1.07E-85 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_04605 955cf0810a99943c50178fa66b284381 885 SUPERFAMILY SSF55073 463 622 1.18E-47 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_04605 955cf0810a99943c50178fa66b284381 885 Pfam PF00990 Diguanylate cyclase, GGDEF domain 458 616 1.9E-45 T 01-11-2018 IPR000160 GGDEF domain DOE78_04605 955cf0810a99943c50178fa66b284381 885 Gene3D G3DSA:3.30.450.20 325 445 1.6E-19 T 01-11-2018 DOE78_04605 955cf0810a99943c50178fa66b284381 885 SMART SM00052 630 872 3.3E-106 T 01-11-2018 IPR001633 EAL domain DOE78_04605 955cf0810a99943c50178fa66b284381 885 SUPERFAMILY SSF55785 341 448 3.38E-18 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_04605 955cf0810a99943c50178fa66b284381 885 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 334 448 2.5E-15 T 01-11-2018 IPR000014 PAS domain DOE78_04605 955cf0810a99943c50178fa66b284381 885 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 455 619 6.6E-40 T 01-11-2018 IPR000160 GGDEF domain DOE78_04605 955cf0810a99943c50178fa66b284381 885 Gene3D G3DSA:3.30.70.270 452 632 3.5E-58 T 01-11-2018 DOE78_04605 955cf0810a99943c50178fa66b284381 885 Pfam PF00563 EAL domain 637 867 2.5E-70 T 01-11-2018 IPR001633 EAL domain DOE78_04605 955cf0810a99943c50178fa66b284381 885 Pfam PF13426 PAS domain 346 446 3.0E-10 T 01-11-2018 IPR000014 PAS domain DOE78_04605 955cf0810a99943c50178fa66b284381 885 SMART SM00267 447 620 1.2E-57 T 01-11-2018 IPR000160 GGDEF domain DOE78_04605 955cf0810a99943c50178fa66b284381 885 SMART SM00091 336 402 5.1E-9 T 01-11-2018 IPR000014 PAS domain DOE78_08565 23d3c02299425219abd7109c4c65dcba 265 SUPERFAMILY SSF56300 1 257 1.14E-86 T 01-11-2018 DOE78_08565 23d3c02299425219abd7109c4c65dcba 265 Pfam PF13277 YmdB-like protein 4 255 3.1E-109 T 01-11-2018 IPR005235 Metallophosphoesterase, YmdB-like DOE78_08565 23d3c02299425219abd7109c4c65dcba 265 Gene3D G3DSA:3.60.21.10 1 265 1.8E-115 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_08565 23d3c02299425219abd7109c4c65dcba 265 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 264 2.2E-112 T 01-11-2018 IPR005235 Metallophosphoesterase, YmdB-like DOE78_08565 23d3c02299425219abd7109c4c65dcba 265 PIRSF PIRSF004789 1 264 9.2E-103 T 01-11-2018 IPR005235 Metallophosphoesterase, YmdB-like DOE78_20060 e310a76d14323e62cffe19401a5a82df 314 Gene3D G3DSA:3.20.20.150 2 313 3.9E-77 T 01-11-2018 DOE78_20060 e310a76d14323e62cffe19401a5a82df 314 SUPERFAMILY SSF51658 17 312 3.93E-63 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_20060 e310a76d14323e62cffe19401a5a82df 314 Pfam PF01261 Xylose isomerase-like TIM barrel 30 228 2.7E-20 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 Gene3D G3DSA:2.60.40.650 244 355 2.0E-30 T 01-11-2018 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 SUPERFAMILY SSF81296 242 354 9.1E-29 T 01-11-2018 IPR014756 Immunoglobulin E-set DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 240 343 1.2E-14 T 01-11-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 182 195 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 198 211 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 13 27 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 33 49 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 109 124 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 277 289 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 165 181 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 PRINTS PR00407 Eukaryotic molybdopterin domain signature 323 335 6.3E-24 T 01-11-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 SUPERFAMILY SSF56524 6 229 1.44E-65 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 Pfam PF00174 Oxidoreductase molybdopterin binding domain 46 217 5.2E-51 T 01-11-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DOE78_04880 6e61e3dc38c354919cc46bf322622cd2 356 Gene3D G3DSA:3.90.420.10 2 243 1.7E-72 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DOE78_22340 787f590797b1e92f47c72020e43d500f 252 SUPERFAMILY SSF55811 31 157 2.57E-23 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_22340 787f590797b1e92f47c72020e43d500f 252 SUPERFAMILY SSF46785 168 243 1.09E-6 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_22340 787f590797b1e92f47c72020e43d500f 252 Pfam PF00293 NUDIX domain 34 153 4.3E-15 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_22340 787f590797b1e92f47c72020e43d500f 252 Gene3D G3DSA:3.90.79.10 4 169 6.8E-46 T 01-11-2018 DOE78_22340 787f590797b1e92f47c72020e43d500f 252 Gene3D G3DSA:1.10.10.10 170 245 1.0E-7 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_20215 24437bb0b6e8330acc973d08637dc817 436 Gene3D G3DSA:1.20.1250.20 17 413 6.1E-37 T 01-11-2018 DOE78_20215 24437bb0b6e8330acc973d08637dc817 436 Pfam PF07690 Major Facilitator Superfamily 52 372 8.3E-30 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_20215 24437bb0b6e8330acc973d08637dc817 436 SUPERFAMILY SSF103473 7 415 3.14E-42 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_03345 8f69408b7b3ca57d3e6078c8ce9f1548 101 Gene3D G3DSA:3.30.70.100 1 101 2.0E-36 T 01-11-2018 DOE78_03345 8f69408b7b3ca57d3e6078c8ce9f1548 101 SUPERFAMILY SSF54909 1 98 2.24E-20 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_03345 8f69408b7b3ca57d3e6078c8ce9f1548 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 79 6.2E-15 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE78_08190 77c2d2997476df02897970c336b0a8a0 199 SUPERFAMILY SSF158791 93 192 1.31E-6 T 01-11-2018 DOE78_08190 77c2d2997476df02897970c336b0a8a0 199 Pfam PF03448 MgtE intracellular N domain 138 196 6.3E-6 T 01-11-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DOE78_13380 933f992cb3181ee940b54b0a51a12ce9 215 Pfam PF08924 Domain of unknown function (DUF1906) 31 130 5.9E-9 T 01-11-2018 IPR015020 Protein of unknown function DUF1906 DOE78_13380 933f992cb3181ee940b54b0a51a12ce9 215 SUPERFAMILY SSF51445 4 213 1.47E-42 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_13380 933f992cb3181ee940b54b0a51a12ce9 215 Gene3D G3DSA:3.20.20.80 4 215 2.0E-64 T 01-11-2018 DOE78_08965 c8aa9a4188090060f53a177501a8a472 320 Gene3D G3DSA:3.40.50.2300 141 313 9.0E-86 T 01-11-2018 DOE78_08965 c8aa9a4188090060f53a177501a8a472 320 Gene3D G3DSA:3.40.50.2300 48 302 9.0E-86 T 01-11-2018 DOE78_08965 c8aa9a4188090060f53a177501a8a472 320 Pfam PF13407 Periplasmic binding protein domain 44 297 7.2E-62 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_08965 c8aa9a4188090060f53a177501a8a472 320 SUPERFAMILY SSF53822 40 317 2.02E-81 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 Gene3D G3DSA:3.10.580.10 1 131 2.3E-35 T 01-11-2018 DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 SUPERFAMILY SSF55021 138 208 2.47E-9 T 01-11-2018 DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 Pfam PF01842 ACT domain 139 201 1.3E-8 T 01-11-2018 IPR002912 ACT domain DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 Gene3D G3DSA:3.30.70.260 132 206 3.4E-5 T 01-11-2018 DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 SUPERFAMILY SSF54631 1 130 8.84E-32 T 01-11-2018 DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 Pfam PF00571 CBS domain 74 127 3.7E-9 T 01-11-2018 IPR000644 CBS domain DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 Pfam PF00571 CBS domain 3 55 1.6E-13 T 01-11-2018 IPR000644 CBS domain DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 SMART SM00116 10 58 1.2E-11 T 01-11-2018 IPR000644 CBS domain DOE78_19180 943f238b9fad7c120a4f4a4bdfd9653a 215 SMART SM00116 81 128 7.3E-12 T 01-11-2018 IPR000644 CBS domain DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 PRINTS PR00421 Thioredoxin family signature 68 79 3.8E-10 T 01-11-2018 DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 PRINTS PR00421 Thioredoxin family signature 28 37 3.8E-10 T 01-11-2018 DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 PRINTS PR00421 Thioredoxin family signature 20 28 3.8E-10 T 01-11-2018 DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 1.5E-39 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 Gene3D G3DSA:3.40.30.10 1 104 2.1E-36 T 01-11-2018 DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 Pfam PF00085 Thioredoxin 3 103 1.3E-32 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 SUPERFAMILY SSF52833 2 104 4.07E-38 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_12425 a0839fd3a91fbf27b78c86c313d7ea14 104 PIRSF PIRSF000077 1 104 1.5E-42 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DOE78_18170 163c243e58e9516a0e6cb6aa6155b3a9 171 SUPERFAMILY SSF56300 1 165 1.67E-41 T 01-11-2018 DOE78_18170 163c243e58e9516a0e6cb6aa6155b3a9 171 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 3 149 1.3E-34 T 01-11-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 DOE78_18170 163c243e58e9516a0e6cb6aa6155b3a9 171 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 145 1.6E-31 T 01-11-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DOE78_18170 163c243e58e9516a0e6cb6aa6155b3a9 171 Gene3D G3DSA:3.60.21.10 1 169 6.6E-46 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_08960 a8b18fd2643768b5ef4427c465614cad 91 Gene3D G3DSA:3.30.70.260 2 91 3.0E-28 T 01-11-2018 DOE78_08960 a8b18fd2643768b5ef4427c465614cad 91 SUPERFAMILY SSF55021 5 85 1.22E-22 T 01-11-2018 DOE78_08960 a8b18fd2643768b5ef4427c465614cad 91 Pfam PF13740 ACT domain 7 79 9.3E-17 T 01-11-2018 DOE78_08960 a8b18fd2643768b5ef4427c465614cad 91 Hamap MF_01054 UPF0237 protein . 4 91 25.394 T 01-11-2018 IPR022986 Uncharacterised protein family UPF0237, ACT-type DOE78_20055 cb9e9b355be2adcf321c9475bf784724 363 Gene3D G3DSA:3.40.50.2300 171 353 1.1E-47 T 01-11-2018 DOE78_20055 cb9e9b355be2adcf321c9475bf784724 363 SUPERFAMILY SSF53822 67 348 1.0E-65 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_20055 cb9e9b355be2adcf321c9475bf784724 363 Gene3D G3DSA:3.40.50.2300 64 165 1.4E-16 T 01-11-2018 DOE78_20055 cb9e9b355be2adcf321c9475bf784724 363 Pfam PF13407 Periplasmic binding protein domain 73 329 5.1E-49 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 SMART SM00448 2 116 6.2E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 SMART SM00342 441 524 1.1E-25 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 SUPERFAMILY SSF46689 426 475 6.09E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 Gene3D G3DSA:1.10.10.60 424 473 3.5E-15 T 01-11-2018 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 Gene3D G3DSA:1.10.10.60 474 530 3.6E-17 T 01-11-2018 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 Pfam PF12833 Helix-turn-helix domain 447 525 2.3E-18 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 493 508 1.8E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 508 524 1.8E-5 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 Gene3D G3DSA:3.40.50.12740 2 181 5.1E-38 T 01-11-2018 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 Pfam PF00072 Response regulator receiver domain 4 116 4.6E-27 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 SUPERFAMILY SSF46689 477 527 4.48E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 478 520 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_21785 2166c79f4080c28ad8e06e8ca93f629e 534 SUPERFAMILY SSF52172 1 159 2.85E-37 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_23495 1bde25bdcd83d396c3307cb23502a77f 132 Pfam PF03788 LrgA family 18 109 1.1E-25 T 01-11-2018 IPR005538 LrgA/CidA family GO:0016021 DOE78_15970 f0477eba844178a27d6ad2a04d6533bc 235 SUPERFAMILY SSF102588 5 227 1.24E-57 T 01-11-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DOE78_15970 f0477eba844178a27d6ad2a04d6533bc 235 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 5 227 9.2E-98 T 01-11-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 DOE78_15970 f0477eba844178a27d6ad2a04d6533bc 235 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 125 2.1E-23 T 01-11-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 DOE78_15970 f0477eba844178a27d6ad2a04d6533bc 235 Gene3D G3DSA:3.40.50.10320 3 235 5.6E-83 T 01-11-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 Gene3D G3DSA:2.160.20.10 11 157 9.8E-8 T 01-11-2018 IPR012334 Pectin lyase fold DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SUPERFAMILY SSF51126 467 680 2.03E-7 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 305 331 5100.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 595 620 8400.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 282 304 46.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 130 155 1200.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 624 646 2400.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 93 128 7400.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 336 358 2600.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SMART SM00710 380 410 3100.0 T 01-11-2018 IPR006626 Parallel beta-helix repeat DOE78_20430 91aa0e23a6e5e72f674c8b648d54db51 682 SUPERFAMILY SSF51126 14 449 5.86E-15 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor DOE78_00845 7daf4c47f7f7eb87b15e0b26d32f1de9 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 1.0E-8 T 01-11-2018 DOE78_00845 7daf4c47f7f7eb87b15e0b26d32f1de9 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00845 7daf4c47f7f7eb87b15e0b26d32f1de9 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 9.2E-24 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00845 7daf4c47f7f7eb87b15e0b26d32f1de9 37 SUPERFAMILY SSF57840 1 37 6.41E-17 T 01-11-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00845 7daf4c47f7f7eb87b15e0b26d32f1de9 37 Pfam PF00444 Ribosomal protein L36 1 37 5.7E-19 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00845 7daf4c47f7f7eb87b15e0b26d32f1de9 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.778 T 01-11-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_04970 74fdfcce17d9ea64ad375971962d1a1d 287 Gene3D G3DSA:1.10.3720.10 41 285 8.6E-69 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04970 74fdfcce17d9ea64ad375971962d1a1d 287 SUPERFAMILY SSF161098 45 276 8.5E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04970 74fdfcce17d9ea64ad375971962d1a1d 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 277 3.0E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_05850 5d9302777b1ce7374efb80d7182e7cd9 406 Gene3D G3DSA:3.60.21.10 2 247 5.7E-58 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_05850 5d9302777b1ce7374efb80d7182e7cd9 406 PIRSF PIRSF033091 1 406 8.2E-133 T 01-11-2018 IPR014576 Predicted phosphoesterase, YhaO type DOE78_05850 5d9302777b1ce7374efb80d7182e7cd9 406 SUPERFAMILY SSF56300 5 293 6.01E-53 T 01-11-2018 DOE78_05850 5d9302777b1ce7374efb80d7182e7cd9 406 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 1.1E-14 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_10465 e3727fc69cab556cc55a3de53f72c527 275 SUPERFAMILY SSF52091 162 270 1.14E-11 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_10465 e3727fc69cab556cc55a3de53f72c527 275 Pfam PF01740 STAS domain 164 268 4.4E-5 T 01-11-2018 IPR002645 STAS domain DOE78_10465 e3727fc69cab556cc55a3de53f72c527 275 Gene3D G3DSA:3.30.750.24 157 273 4.1E-30 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_11355 b94e0c82e313809c0561d0e086666ada 111 Pfam PF13789 Domain of unknown function (DUF4181) 16 99 2.0E-15 T 01-11-2018 IPR025441 Protein of unknown function DUF4181 DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 01-11-2018 IPR019844 Cold-shock conserved site DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 SUPERFAMILY SSF50249 1 64 8.57E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 PIRSF PIRSF002599 1 66 1.2E-24 T 01-11-2018 IPR012156 Cold shock, CspA GO:0003676 DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 Gene3D G3DSA:2.40.50.140 1 66 1.6E-30 T 01-11-2018 DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 SMART SM00357 3 66 2.8E-31 T 01-11-2018 IPR011129 Cold shock domain GO:0003676 DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.7E-30 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 PRINTS PR00050 Cold shock protein signature 24 33 7.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 PRINTS PR00050 Cold shock protein signature 39 57 7.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_03255 c7d20639bd84abeb75944ae7e9f99de6 66 PRINTS PR00050 Cold shock protein signature 4 19 7.9E-19 T 01-11-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DOE78_05525 31e16533b3c89933d34703bfd6b9d41f 156 Pfam PF00085 Thioredoxin 63 152 1.3E-13 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 DOE78_05525 31e16533b3c89933d34703bfd6b9d41f 156 SUPERFAMILY SSF52833 48 152 5.98E-26 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_05525 31e16533b3c89933d34703bfd6b9d41f 156 Gene3D G3DSA:3.40.30.10 49 152 1.8E-20 T 01-11-2018 DOE78_20345 68cac9903bb8dab6ddb78bdbfed362a0 495 PIRSF PIRSF005690 2 487 5.3E-149 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_20345 68cac9903bb8dab6ddb78bdbfed362a0 495 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 24 471 1.5E-158 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_19420 ba852705cced46f626a02d014e2828ec 399 Gene3D G3DSA:1.20.1250.20 192 398 3.8E-24 T 01-11-2018 DOE78_19420 ba852705cced46f626a02d014e2828ec 399 Gene3D G3DSA:1.20.1250.20 1 191 1.2E-23 T 01-11-2018 DOE78_19420 ba852705cced46f626a02d014e2828ec 399 Pfam PF07690 Major Facilitator Superfamily 8 265 3.7E-26 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_19420 ba852705cced46f626a02d014e2828ec 399 PRINTS PR01988 Putative bacilysin exporter bacE signature 131 152 4.5E-5 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DOE78_19420 ba852705cced46f626a02d014e2828ec 399 PRINTS PR01988 Putative bacilysin exporter bacE signature 7 29 4.5E-5 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DOE78_19420 ba852705cced46f626a02d014e2828ec 399 PRINTS PR01988 Putative bacilysin exporter bacE signature 92 110 4.5E-5 T 01-11-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DOE78_19420 ba852705cced46f626a02d014e2828ec 399 SUPERFAMILY SSF103473 3 389 1.2E-53 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 Pfam PF00551 Formyl transferase 105 281 4.2E-40 T 01-11-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 Gene3D G3DSA:3.30.70.260 16 101 5.5E-25 T 01-11-2018 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 22 48 8.3E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 55 67 8.3E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 273 8.3E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 127 154 8.3E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 127 8.3E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 273 298 8.3E-54 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 Pfam PF01842 ACT domain 21 81 6.7E-11 T 01-11-2018 IPR002912 ACT domain DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 21 299 4.1E-120 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 PIRSF PIRSF036480 17 300 6.9E-110 T 01-11-2018 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 SUPERFAMILY SSF53328 105 300 2.88E-60 T 01-11-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 17 299 44.571 T 01-11-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 Gene3D G3DSA:3.40.50.170 104 300 2.7E-69 T 01-11-2018 DOE78_14915 e3a13840c2d68a69de91be75b0738cbc 300 SUPERFAMILY SSF55021 20 99 3.23E-17 T 01-11-2018 DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 34 287 6.7E-115 T 01-11-2018 IPR023705 Nucleoid occlusion protein DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 287 37.861 T 01-11-2018 IPR023705 Nucleoid occlusion protein DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 SUPERFAMILY SSF109709 120 226 4.45E-34 T 01-11-2018 DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 Pfam PF02195 ParB-like nuclease domain 37 125 1.4E-27 T 01-11-2018 IPR003115 ParB/Sulfiredoxin DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 Gene3D G3DSA:1.10.10.2830 113 227 2.0E-36 T 01-11-2018 DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 Gene3D G3DSA:3.90.1530.30 49 112 2.3E-24 T 01-11-2018 DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 212 2.0E-61 T 01-11-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 SMART SM00470 36 126 3.8E-37 T 01-11-2018 IPR003115 ParB/Sulfiredoxin DOE78_24695 674b5de962ffdb6287e9a8b59e979814 289 SUPERFAMILY SSF110849 36 128 4.45E-29 T 01-11-2018 IPR036086 ParB/Sulfiredoxin superfamily DOE78_04445 69165fb3edfa6653d07034a3791b3e29 340 Gene3D G3DSA:1.10.10.60 226 334 1.1E-23 T 01-11-2018 DOE78_04445 69165fb3edfa6653d07034a3791b3e29 340 SUPERFAMILY SSF46689 283 334 8.6E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04445 69165fb3edfa6653d07034a3791b3e29 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 204 3.4E-21 T 01-11-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DOE78_04445 69165fb3edfa6653d07034a3791b3e29 340 Pfam PF12833 Helix-turn-helix domain 254 331 3.0E-19 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04445 69165fb3edfa6653d07034a3791b3e29 340 SMART SM00342 248 330 5.9E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_06245 de825e519704da3a306fe27b47bbcf06 491 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 1.6E-5 T 01-11-2018 DOE78_06245 de825e519704da3a306fe27b47bbcf06 491 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 1.6E-5 T 01-11-2018 DOE78_06245 de825e519704da3a306fe27b47bbcf06 491 SUPERFAMILY SSF51905 1 475 1.73E-55 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_06245 de825e519704da3a306fe27b47bbcf06 491 Pfam PF01593 Flavin containing amine oxidoreductase 10 457 3.4E-19 T 01-11-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DOE78_06245 de825e519704da3a306fe27b47bbcf06 491 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 4 480 1.3E-101 T 01-11-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 DOE78_06245 de825e519704da3a306fe27b47bbcf06 491 Gene3D G3DSA:3.50.50.60 1 102 1.5E-15 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_06245 de825e519704da3a306fe27b47bbcf06 491 Gene3D G3DSA:3.50.50.60 170 318 6.3E-6 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_00615 9e76a8370d8911febc6092078f822566 169 Pfam PF05991 YacP-like NYN domain 4 166 8.2E-58 T 01-11-2018 IPR010298 Protein of unknown function DUF901 DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 Pfam PF00294 pfkB family carbohydrate kinase 5 295 1.0E-57 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 SUPERFAMILY SSF53613 6 301 4.05E-75 T 01-11-2018 IPR029056 Ribokinase-like DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 PRINTS PR00990 Ribokinase signature 174 189 3.8E-25 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 PRINTS PR00990 Ribokinase signature 8 29 3.8E-25 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 PRINTS PR00990 Ribokinase signature 218 229 3.8E-25 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 PRINTS PR00990 Ribokinase signature 35 54 3.8E-25 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 PRINTS PR00990 Ribokinase signature 106 119 3.8E-25 T 01-11-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 Gene3D G3DSA:3.40.1190.20 1 302 2.8E-91 T 01-11-2018 IPR029056 Ribokinase-like DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 40 64 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_20040 a1ab72569cbc75d3c90a631dcaff4be1 303 Hamap MF_01987 Ribokinase [rbsK]. 4 302 22.68 T 01-11-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DOE78_22945 0bd9d4de36465b4a8452e44a8f9d2f00 233 SUPERFAMILY SSF53271 75 231 5.24E-25 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_22945 0bd9d4de36465b4a8452e44a8f9d2f00 233 Pfam PF00156 Phosphoribosyl transferase domain 171 231 3.7E-11 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_22945 0bd9d4de36465b4a8452e44a8f9d2f00 233 Gene3D G3DSA:3.40.50.2020 79 233 2.0E-16 T 01-11-2018 DOE78_07320 a600ef68b0278594c68a6ec13080e6dd 70 Gene3D G3DSA:3.10.20.730 1 58 2.6E-26 T 01-11-2018 DOE78_07320 a600ef68b0278594c68a6ec13080e6dd 70 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 64 3.0E-19 T 01-11-2018 IPR009907 Protein of unknown function DUF1447 DOE78_07320 a600ef68b0278594c68a6ec13080e6dd 70 Hamap MF_01553 UPF0356 protein . 1 69 22.123 T 01-11-2018 IPR009907 Protein of unknown function DUF1447 DOE78_07320 a600ef68b0278594c68a6ec13080e6dd 70 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 1.5E-28 T 01-11-2018 IPR009907 Protein of unknown function DUF1447 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 8.6E-55 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 8.6E-55 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 8.6E-55 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 8.6E-55 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 8.6E-55 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 Pfam PF01467 Cytidylyltransferase-like 7 134 9.0E-21 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.574 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 79 3.0E-5 T 01-11-2018 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 Gene3D G3DSA:3.40.50.620 1 161 2.3E-60 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_07590 4d91960591c1d99910955bbe9412881c 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 2.0E-18 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 9.4E-64 T 01-11-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DOE78_07590 4d91960591c1d99910955bbe9412881c 161 SUPERFAMILY SSF52374 4 157 2.82E-45 T 01-11-2018 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 Gene3D G3DSA:3.40.50.1820 1 270 3.8E-68 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 Pfam PF00561 alpha/beta hydrolase fold 25 129 8.6E-24 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 PRINTS PR00412 Epoxide hydrolase signature 50 65 2.2E-8 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 PRINTS PR00412 Epoxide hydrolase signature 30 48 2.2E-8 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 PRINTS PR00412 Epoxide hydrolase signature 246 268 2.2E-8 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 PRINTS PR00412 Epoxide hydrolase signature 213 229 2.2E-8 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 3.3E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.3E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 215 229 3.3E-10 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_09810 b819d8dff8f87731a76933aaf18a95dd 270 SUPERFAMILY SSF53474 3 269 3.74E-59 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_16110 3c4033e447134e13c9c661febde97919 101 Gene3D G3DSA:4.10.520.10 12 101 1.2E-41 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DOE78_16110 3c4033e447134e13c9c661febde97919 101 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 57 76 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DOE78_16110 3c4033e447134e13c9c661febde97919 101 Pfam PF00216 Bacterial DNA-binding protein 12 101 2.0E-38 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_16110 3c4033e447134e13c9c661febde97919 101 SMART SM00411 12 101 2.6E-53 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_16110 3c4033e447134e13c9c661febde97919 101 PRINTS PR01727 Prokaryotic integration host factor signature 69 82 2.1E-22 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_16110 3c4033e447134e13c9c661febde97919 101 PRINTS PR01727 Prokaryotic integration host factor signature 51 66 2.1E-22 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_16110 3c4033e447134e13c9c661febde97919 101 PRINTS PR01727 Prokaryotic integration host factor signature 85 99 2.1E-22 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_16110 3c4033e447134e13c9c661febde97919 101 SUPERFAMILY SSF47729 12 101 2.94E-36 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 Gene3D G3DSA:3.90.226.10 63 278 4.3E-86 T 01-11-2018 DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 PRINTS PR00127 Clp protease catalytic subunit P signature 246 265 4.3E-5 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 PRINTS PR00127 Clp protease catalytic subunit P signature 140 157 4.3E-5 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 PRINTS PR00127 Clp protease catalytic subunit P signature 106 126 4.3E-5 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 61 281 3.2E-82 T 01-11-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 SUPERFAMILY SSF52096 58 270 3.43E-41 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 Pfam PF01343 Peptidase family S49 134 283 5.1E-55 T 01-11-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DOE78_18625 075da7feac52b2c0e14faedce26f82af 336 Gene3D G3DSA:3.40.1750.20 173 239 4.3E-86 T 01-11-2018 DOE78_05515 d5b9e38db1d3c34c066c1423f2713bb5 303 Pfam PF00849 RNA pseudouridylate synthase 94 246 2.2E-35 T 01-11-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_05515 d5b9e38db1d3c34c066c1423f2713bb5 303 Gene3D G3DSA:3.30.2350.10 77 292 3.5E-66 T 01-11-2018 DOE78_05515 d5b9e38db1d3c34c066c1423f2713bb5 303 SUPERFAMILY SSF55120 80 293 8.32E-65 T 01-11-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_05515 d5b9e38db1d3c34c066c1423f2713bb5 303 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 291 1.0E-73 T 01-11-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_05515 d5b9e38db1d3c34c066c1423f2713bb5 303 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 01-11-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DOE78_21065 d83a2b8ccd161582aaa657083e2990e1 99 PIRSF PIRSF012565 1 98 2.1E-47 T 01-11-2018 IPR009370 Protein of unknown function DUF1027 DOE78_21065 d83a2b8ccd161582aaa657083e2990e1 99 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 2.9E-37 T 01-11-2018 IPR009370 Protein of unknown function DUF1027 DOE78_21065 d83a2b8ccd161582aaa657083e2990e1 99 Gene3D G3DSA:3.50.4.20 1 98 8.8E-42 T 01-11-2018 IPR038141 YutD-like superfamily DOE78_05200 080aabbc920e6ce670fee456aaa94748 334 SUPERFAMILY SSF161098 90 317 1.29E-21 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_05200 080aabbc920e6ce670fee456aaa94748 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 4.4E-42 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_11815 d713cade2d5c99e74ebf78e6df32de2b 263 Gene3D G3DSA:3.90.226.10 1 203 3.5E-64 T 01-11-2018 DOE78_11815 d713cade2d5c99e74ebf78e6df32de2b 263 Gene3D G3DSA:1.10.12.10 206 263 6.3E-20 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DOE78_11815 d713cade2d5c99e74ebf78e6df32de2b 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 262 5.6E-59 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DOE78_11815 d713cade2d5c99e74ebf78e6df32de2b 263 SUPERFAMILY SSF52096 6 262 1.41E-80 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_10990 3ad2caf40ff2e40e25f4bb294d715833 241 Pfam PF02517 CAAX protease self-immunity 145 232 4.9E-15 T 01-11-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DOE78_10070 76f42114077e3bf83cf45048a2ee2b8e 97 Gene3D G3DSA:3.30.70.100 1 96 1.1E-36 T 01-11-2018 DOE78_10070 76f42114077e3bf83cf45048a2ee2b8e 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 3.6E-10 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE78_10070 76f42114077e3bf83cf45048a2ee2b8e 97 SUPERFAMILY SSF54909 1 95 3.92E-25 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_19620 4ca11ec0ed0fae80d55117248c7776cd 802 PIRSF PIRSF000460 2 802 8.2E-239 T 01-11-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DOE78_19620 4ca11ec0ed0fae80d55117248c7776cd 802 Gene3D G3DSA:3.40.50.2000 460 787 0.0 T 01-11-2018 DOE78_19620 4ca11ec0ed0fae80d55117248c7776cd 802 Gene3D G3DSA:3.40.50.2000 14 794 0.0 T 01-11-2018 DOE78_19620 4ca11ec0ed0fae80d55117248c7776cd 802 SUPERFAMILY SSF53756 4 798 2.51E-302 T 01-11-2018 DOE78_19620 4ca11ec0ed0fae80d55117248c7776cd 802 Pfam PF00343 Carbohydrate phosphorylase 93 794 0.0 T 01-11-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DOE78_19620 4ca11ec0ed0fae80d55117248c7776cd 802 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 01-11-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DOE78_19620 4ca11ec0ed0fae80d55117248c7776cd 802 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 794 0.0 T 01-11-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DOE78_06365 64082cc21b9ffb39f8f316b7bba096b5 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 62.543 T 01-11-2018 IPR022822 Lactate utilization protein A GO:0006089 DOE78_06365 64082cc21b9ffb39f8f316b7bba096b5 238 Pfam PF02754 Cysteine-rich domain 131 215 1.6E-17 T 01-11-2018 IPR004017 Cysteine-rich domain DOE78_06365 64082cc21b9ffb39f8f316b7bba096b5 238 Pfam PF02754 Cysteine-rich domain 3 83 2.3E-15 T 01-11-2018 IPR004017 Cysteine-rich domain DOE78_22050 1b9d163a847d7d17a7f44b578086fe6b 248 PIRSF PIRSF017388 1 246 9.4E-97 T 01-11-2018 IPR012354 Esterase/lipase GO:0052689 DOE78_22050 1b9d163a847d7d17a7f44b578086fe6b 248 SUPERFAMILY SSF53474 12 245 6.12E-38 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_22050 1b9d163a847d7d17a7f44b578086fe6b 248 Pfam PF12146 Serine aminopeptidase, S33 17 229 1.2E-18 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 DOE78_22050 1b9d163a847d7d17a7f44b578086fe6b 248 Gene3D G3DSA:3.40.50.1820 1 246 1.8E-63 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_03890 dca2d08d44380192420301ca7a1677bb 478 PIRSF PIRSF012293 2 478 8.5E-130 T 01-11-2018 IPR009377 Ethanolamine utilisation EutA DOE78_03890 dca2d08d44380192420301ca7a1677bb 478 SUPERFAMILY SSF53067 8 267 2.04E-7 T 01-11-2018 DOE78_03890 dca2d08d44380192420301ca7a1677bb 478 Pfam PF06277 Ethanolamine utilisation protein EutA 5 477 1.7E-143 T 01-11-2018 IPR009377 Ethanolamine utilisation EutA DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 SUPERFAMILY SSF46785 5 76 5.01E-15 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 SMART SM01134 73 230 3.0E-59 T 01-11-2018 DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 Pfam PF00455 DeoR C terminal sensor domain 75 228 6.2E-45 T 01-11-2018 IPR014036 DeoR C-terminal sensor domain DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 SMART SM00420 6 58 3.6E-18 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.8E-7 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.8E-7 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.3E-15 T 01-11-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 SUPERFAMILY SSF100950 74 229 2.2E-32 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_15100 7cec2a2ce23e3e9e7ac59a1a4b396c98 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 01-11-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DOE78_10425 9e5b38bbbb7a30c3c4d13da4b7c880eb 133 SUPERFAMILY SSF54593 6 128 4.26E-15 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10425 9e5b38bbbb7a30c3c4d13da4b7c880eb 133 Gene3D G3DSA:3.10.180.10 6 130 5.7E-13 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_01650 e22fbe458ff853564185ac958b870b5c 129 PIRSF PIRSF016789 5 126 3.3E-29 T 01-11-2018 IPR007401 Protein of unknown function DUF454 DOE78_01650 e22fbe458ff853564185ac958b870b5c 129 Pfam PF04304 Protein of unknown function (DUF454) 7 119 2.5E-31 T 01-11-2018 IPR007401 Protein of unknown function DUF454 DOE78_19795 bf8dd47d1513cc179773f4af5e95a897 395 Gene3D G3DSA:3.30.360.10 134 387 5.0E-71 T 01-11-2018 DOE78_19795 bf8dd47d1513cc179773f4af5e95a897 395 Gene3D G3DSA:3.40.50.720 1 133 2.8E-36 T 01-11-2018 DOE78_19795 bf8dd47d1513cc179773f4af5e95a897 395 SUPERFAMILY SSF55347 137 319 8.67E-41 T 01-11-2018 DOE78_19795 bf8dd47d1513cc179773f4af5e95a897 395 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 212 3.0E-11 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_19795 bf8dd47d1513cc179773f4af5e95a897 395 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 2.1E-25 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_19795 bf8dd47d1513cc179773f4af5e95a897 395 SUPERFAMILY SSF51735 2 164 4.47E-49 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11665 706fdd59a11e3d879a59dace539ec000 289 Gene3D G3DSA:3.40.50.970 2 289 1.7E-88 T 01-11-2018 DOE78_11665 706fdd59a11e3d879a59dace539ec000 289 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 34 278 3.2E-41 T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_11665 706fdd59a11e3d879a59dace539ec000 289 SUPERFAMILY SSF52518 26 282 7.12E-72 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 Pfam PF00232 Glycosyl hydrolase family 1 7 475 2.0E-179 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 374 382 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 SUPERFAMILY SSF51445 7 472 2.74E-174 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 8.8E-17 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 8.8E-17 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 8.8E-17 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 8.8E-17 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 8.8E-17 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_05985 393f6749eaa6bd49ac08c4f00792b969 478 Gene3D G3DSA:3.20.20.80 2 478 7.3E-188 T 01-11-2018 DOE78_00605 d98f727d33390a74153c35aa1171b84a 134 SUPERFAMILY SSF69065 9 130 2.27E-42 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DOE78_00605 d98f727d33390a74153c35aa1171b84a 134 PIRSF PIRSF005520 1 134 5.8E-54 T 01-11-2018 IPR008226 Mini-ribonuclease 3 family DOE78_00605 d98f727d33390a74153c35aa1171b84a 134 Pfam PF00636 Ribonuclease III domain 17 115 9.6E-18 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DOE78_00605 d98f727d33390a74153c35aa1171b84a 134 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 7 133 31.098 T 01-11-2018 IPR008226 Mini-ribonuclease 3 family DOE78_00605 d98f727d33390a74153c35aa1171b84a 134 Gene3D G3DSA:1.10.1520.10 5 134 1.5E-50 T 01-11-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DOE78_00605 d98f727d33390a74153c35aa1171b84a 134 SMART SM00535 1 132 2.7E-4 T 01-11-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DOE78_03790 b61304a91d00e902967874549df2b7e5 316 Gene3D G3DSA:3.40.50.2020 12 304 2.4E-119 T 01-11-2018 DOE78_03790 b61304a91d00e902967874549df2b7e5 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 125 1.5E-47 T 01-11-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DOE78_03790 b61304a91d00e902967874549df2b7e5 316 Gene3D G3DSA:3.40.50.2020 152 292 2.4E-119 T 01-11-2018 DOE78_03790 b61304a91d00e902967874549df2b7e5 316 SUPERFAMILY SSF53271 74 308 8.09E-59 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_03790 b61304a91d00e902967874549df2b7e5 316 SMART SM01400 9 125 1.1E-75 T 01-11-2018 DOE78_03790 b61304a91d00e902967874549df2b7e5 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 9 316 46.645 T 01-11-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DOE78_03790 b61304a91d00e902967874549df2b7e5 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 10 316 1.1E-116 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DOE78_03790 b61304a91d00e902967874549df2b7e5 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 315 4.7E-25 T 01-11-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 Pfam PF00072 Response regulator receiver domain 6 111 1.3E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 Gene3D G3DSA:3.40.50.2300 2 142 2.2E-34 T 01-11-2018 DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 SMART SM00448 4 127 1.4E-28 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 PIRSF PIRSF000876 1 359 3.9E-135 T 01-11-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 Pfam PF01339 CheB methylesterase 175 355 9.6E-57 T 01-11-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 Gene3D G3DSA:3.40.50.180 167 359 1.6E-67 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 SUPERFAMILY SSF52738 173 359 2.09E-60 T 01-11-2018 IPR035909 Methylesterase CheB, C-terminal DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 SUPERFAMILY SSF52172 1 111 8.68E-29 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_08280 46ff3fdf08801a88dd48519128d06ff6 359 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 359 38.253 T 01-11-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DOE78_13475 27f98735f7108ed5d2aa729ae68b87e0 43 Pfam PF13040 Fur-regulated basic protein B 2 38 1.4E-16 T 01-11-2018 IPR025004 Transcriptional regulatory protein SenN/SenS DOE78_13165 deeb57625af2f0218190d34b9092a455 224 Pfam PF04012 PspA/IM30 family 10 212 9.3E-33 T 01-11-2018 IPR007157 PspA/IM30 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 SUPERFAMILY SSF63520 58 170 1.83E-27 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 Gene3D G3DSA:1.20.58.1950 225 277 2.7E-24 T 01-11-2018 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 Gene3D G3DSA:2.30.24.10 2 68 7.0E-23 T 01-11-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 SUPERFAMILY SSF50151 5 56 1.22E-15 T 01-11-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 SMART SM01061 4 62 4.2E-25 T 01-11-2018 IPR004341 CAT RNA-binding domain GO:0003723 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 Gene3D G3DSA:1.20.890.100 169 223 1.1E-20 T 01-11-2018 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 Pfam PF03123 CAT RNA binding domain 5 60 2.3E-21 T 01-11-2018 IPR004341 CAT RNA-binding domain GO:0003723 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 SUPERFAMILY SSF63520 178 276 8.24E-23 T 01-11-2018 IPR036634 PRD domain superfamily GO:0006355 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 Gene3D G3DSA:1.10.1790.10 71 168 3.7E-29 T 01-11-2018 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 Pfam PF00874 PRD domain 80 166 3.9E-24 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_01790 4e42045c6efafd59732add0a6eeaf44d 280 Pfam PF00874 PRD domain 184 274 1.0E-18 T 01-11-2018 IPR011608 PRD domain GO:0006355 DOE78_22950 c1c6a3df60c2f9b30b21c0517a0965b9 452 SUPERFAMILY SSF52540 120 424 7.51E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22950 c1c6a3df60c2f9b30b21c0517a0965b9 452 SMART SM00490 331 412 3.9E-7 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_22950 c1c6a3df60c2f9b30b21c0517a0965b9 452 Gene3D G3DSA:3.40.50.300 109 265 2.2E-17 T 01-11-2018 DOE78_22950 c1c6a3df60c2f9b30b21c0517a0965b9 452 Pfam PF04851 Type III restriction enzyme, res subunit 109 256 1.4E-8 T 01-11-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DOE78_22950 c1c6a3df60c2f9b30b21c0517a0965b9 452 Pfam PF00271 Helicase conserved C-terminal domain 315 411 6.9E-8 T 01-11-2018 IPR001650 Helicase, C-terminal DOE78_22950 c1c6a3df60c2f9b30b21c0517a0965b9 452 SMART SM00487 105 287 1.1E-12 T 01-11-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DOE78_22950 c1c6a3df60c2f9b30b21c0517a0965b9 452 Gene3D G3DSA:3.40.50.300 293 428 7.8E-22 T 01-11-2018 DOE78_12910 5cda1a5f59a7fb1b5f14def621e3f9db 159 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 31 121 2.6E-30 T 01-11-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DOE78_12910 5cda1a5f59a7fb1b5f14def621e3f9db 159 Gene3D G3DSA:3.30.479.10 102 159 1.9E-9 T 01-11-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DOE78_12910 5cda1a5f59a7fb1b5f14def621e3f9db 159 Gene3D G3DSA:3.30.479.10 26 101 1.5E-23 T 01-11-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DOE78_12910 5cda1a5f59a7fb1b5f14def621e3f9db 159 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 31 155 9.4E-35 T 01-11-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DOE78_12910 5cda1a5f59a7fb1b5f14def621e3f9db 159 SUPERFAMILY SSF55620 25 155 4.73E-37 T 01-11-2018 DOE78_06670 34948c4e28fc8c960be8c5cf1690a743 205 Gene3D G3DSA:1.10.530.10 48 204 4.6E-52 T 01-11-2018 DOE78_06670 34948c4e28fc8c960be8c5cf1690a743 205 SUPERFAMILY SSF53955 82 203 1.69E-50 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_06670 34948c4e28fc8c960be8c5cf1690a743 205 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 105 133 - T 01-11-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DOE78_06670 34948c4e28fc8c960be8c5cf1690a743 205 Pfam PF01464 Transglycosylase SLT domain 87 195 9.9E-32 T 01-11-2018 IPR008258 Transglycosylase SLT domain 1 DOE78_10225 c40ef8724511bcd8aaf159d9d55107ad 392 PIRSF PIRSF004810 1 392 2.4E-129 T 01-11-2018 IPR014047 Chromate transporter, long chain DOE78_10225 c40ef8724511bcd8aaf159d9d55107ad 392 TIGRFAM TIGR00937 2A51: chromate efflux transporter 17 386 7.7E-109 T 01-11-2018 IPR014047 Chromate transporter, long chain DOE78_10225 c40ef8724511bcd8aaf159d9d55107ad 392 Pfam PF02417 Chromate transporter 224 385 2.6E-40 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DOE78_10225 c40ef8724511bcd8aaf159d9d55107ad 392 Pfam PF02417 Chromate transporter 10 173 3.0E-29 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DOE78_17645 3a704345175279cabd2330f8cd68d9a3 592 Gene3D G3DSA:3.90.1310.30 49 231 6.6E-13 T 01-11-2018 DOE78_17645 3a704345175279cabd2330f8cd68d9a3 592 SUPERFAMILY SSF56601 186 581 1.19E-55 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_17645 3a704345175279cabd2330f8cd68d9a3 592 Gene3D G3DSA:3.40.710.10 235 588 2.6E-64 T 01-11-2018 DOE78_17645 3a704345175279cabd2330f8cd68d9a3 592 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 563 4.4E-40 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_17645 3a704345175279cabd2330f8cd68d9a3 592 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 216 7.5E-7 T 01-11-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DOE78_17645 3a704345175279cabd2330f8cd68d9a3 592 SUPERFAMILY SSF56519 50 224 2.62E-21 T 01-11-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DOE78_13480 e246f3642dd05a91abaa51be295cd83f 47 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 1 47 17.524 T 01-11-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 DOE78_13480 e246f3642dd05a91abaa51be295cd83f 47 Pfam PF08177 Small acid-soluble spore protein N family 1 46 5.2E-25 T 01-11-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 DOE78_00400 ef3f2ab52ce7d4f7cea9388473410b26 183 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 174 3.4E-68 T 01-11-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 DOE78_00400 ef3f2ab52ce7d4f7cea9388473410b26 183 SUPERFAMILY SSF53271 2 179 5.24E-62 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_00400 ef3f2ab52ce7d4f7cea9388473410b26 183 Pfam PF00156 Phosphoribosyl transferase domain 12 160 1.8E-24 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_00400 ef3f2ab52ce7d4f7cea9388473410b26 183 Gene3D G3DSA:3.40.50.2020 1 183 3.1E-67 T 01-11-2018 DOE78_02930 404dd2f62fb8c5e36b4665ca2a7185b9 228 PIRSF PIRSF009467 3 228 2.0E-74 T 01-11-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DOE78_02930 404dd2f62fb8c5e36b4665ca2a7185b9 228 Gene3D G3DSA:1.10.4190.10 2 206 2.1E-66 T 01-11-2018 IPR038277 UreF domain superfamily DOE78_02930 404dd2f62fb8c5e36b4665ca2a7185b9 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 4 228 27.653 T 01-11-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DOE78_02930 404dd2f62fb8c5e36b4665ca2a7185b9 228 Pfam PF01730 UreF 36 185 2.6E-26 T 01-11-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DOE78_17030 1d266e4eadceb695acfdeb46142aab3c 264 ProDom PD123329 YQHG BH2818 1 259 3.0E-94 T 01-11-2018 IPR024562 Uncharacterised protein family YqhG DOE78_17030 1d266e4eadceb695acfdeb46142aab3c 264 Pfam PF11079 Bacterial protein YqhG of unknown function 2 259 3.8E-126 T 01-11-2018 IPR024562 Uncharacterised protein family YqhG DOE78_20245 f2e0d86a833f0d93a03dd62e7bedd377 216 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 16 214 2.5E-93 T 01-11-2018 IPR017791 Urea carboxylase-associated protein 1 DOE78_20245 f2e0d86a833f0d93a03dd62e7bedd377 216 Pfam PF09347 Domain of unknown function (DUF1989) 21 184 1.9E-58 T 01-11-2018 IPR018959 Protein of unknown function DUF1989 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 ProSitePatterns PS00123 Alkaline phosphatase active site. 80 88 - T 01-11-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 Gene3D G3DSA:3.40.720.10 38 439 1.1E-125 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 PRINTS PR00113 Alkaline phosphatase signature 34 54 2.9E-32 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 PRINTS PR00113 Alkaline phosphatase signature 132 152 2.9E-32 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 PRINTS PR00113 Alkaline phosphatase signature 247 276 2.9E-32 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 PRINTS PR00113 Alkaline phosphatase signature 176 186 2.9E-32 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 SMART SM00098 35 450 1.0E-83 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 SUPERFAMILY SSF53649 10 453 3.14E-111 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 Pfam PF00245 Alkaline phosphatase 35 447 8.9E-88 T 01-11-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DOE78_22225 418a277dfced20272ea18fd859f5ea48 534 Gene3D G3DSA:1.10.60.40 323 411 1.1E-125 T 01-11-2018 DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 Gene3D G3DSA:3.40.50.720 2 257 2.2E-63 T 01-11-2018 DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 7.1E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 7.1E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 7.1E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.1E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.1E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 7.1E-27 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 SUPERFAMILY SSF51735 5 255 1.84E-63 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 3.2E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 3.2E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 3.2E-7 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_10900 c9e0c44a1c2353862cc32ed73788c0d5 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 255 1.8E-42 T 01-11-2018 DOE78_12315 d3b6534b483652222990c0edf85a4061 237 Gene3D G3DSA:3.40.50.10420 32 204 2.3E-14 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DOE78_12315 d3b6534b483652222990c0edf85a4061 237 SUPERFAMILY SSF100950 3 214 2.65E-34 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_12315 d3b6534b483652222990c0edf85a4061 237 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 196 3.8E-28 T 01-11-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DOE78_00295 ecaf717d5c26da5a42f04055ce3f4133 124 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 01-11-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 DOE78_00295 ecaf717d5c26da5a42f04055ce3f4133 124 SUPERFAMILY SSF55298 2 123 6.75E-47 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DOE78_00295 ecaf717d5c26da5a42f04055ce3f4133 124 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 4.9E-55 T 01-11-2018 IPR006056 RidA family Reactome: R-HSA-8849175 DOE78_00295 ecaf717d5c26da5a42f04055ce3f4133 124 Pfam PF01042 Endoribonuclease L-PSP 7 122 2.1E-46 T 01-11-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DOE78_00295 ecaf717d5c26da5a42f04055ce3f4133 124 Gene3D G3DSA:3.30.1330.40 1 124 7.2E-55 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DOE78_19220 f21cf1783a36c498684605893a80fdb3 153 Pfam PF12732 YtxH-like protein 24 105 1.3E-19 T 01-11-2018 IPR024623 Uncharacterised protein family YtxH DOE78_08725 b21ea80b0ad101f983484e900598dfbd 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 10 214 2.3E-63 T 01-11-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DOE78_02885 b05f308907f4a796a02b9c76d2d752b3 407 SUPERFAMILY SSF55874 276 396 7.33E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02885 b05f308907f4a796a02b9c76d2d752b3 407 Gene3D G3DSA:3.30.565.10 275 396 1.1E-26 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02885 b05f308907f4a796a02b9c76d2d752b3 407 Pfam PF07730 Histidine kinase 203 268 3.1E-18 T 01-11-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DOE78_02885 b05f308907f4a796a02b9c76d2d752b3 407 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 396 4.5E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02885 b05f308907f4a796a02b9c76d2d752b3 407 SMART SM00387 308 398 4.4E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_07895 ab34e1b556196db36c926ce39a3812c2 87 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 7.0E-32 T 01-11-2018 IPR007169 Extracellular matrix regulatory protein A DOE78_07895 ab34e1b556196db36c926ce39a3812c2 87 Pfam PF04025 Domain of unknown function (DUF370) 5 77 4.4E-37 T 01-11-2018 IPR007169 Extracellular matrix regulatory protein A DOE78_07895 ab34e1b556196db36c926ce39a3812c2 87 Hamap MF_01503 UPF0296 protein . 3 87 29.305 T 01-11-2018 IPR007169 Extracellular matrix regulatory protein A DOE78_05445 8d59e03cc89bf26fca83e05419624cd7 361 Pfam PF00149 Calcineurin-like phosphoesterase 141 303 1.6E-12 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_05445 8d59e03cc89bf26fca83e05419624cd7 361 SUPERFAMILY SSF56300 141 357 1.01E-35 T 01-11-2018 DOE78_05445 8d59e03cc89bf26fca83e05419624cd7 361 Gene3D G3DSA:3.60.21.10 139 323 1.7E-25 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_17175 2c24cde9ee39526a3dcc5432c77de525 480 Gene3D G3DSA:2.160.10.10 244 369 2.3E-20 T 01-11-2018 DOE78_17175 2c24cde9ee39526a3dcc5432c77de525 480 Pfam PF00483 Nucleotidyl transferase 2 232 1.8E-44 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_17175 2c24cde9ee39526a3dcc5432c77de525 480 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 277 302 1.8E-5 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_17175 2c24cde9ee39526a3dcc5432c77de525 480 SUPERFAMILY SSF53448 1 299 5.63E-69 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_17175 2c24cde9ee39526a3dcc5432c77de525 480 SUPERFAMILY SSF51161 246 338 8.95E-21 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_17175 2c24cde9ee39526a3dcc5432c77de525 480 Gene3D G3DSA:3.90.550.10 1 243 1.1E-65 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_12990 0ac548459ca5ae25383b9dc5463354de 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 209 26.784 T 01-11-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12990 0ac548459ca5ae25383b9dc5463354de 211 Gene3D G3DSA:3.20.20.70 1 211 3.7E-66 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_12990 0ac548459ca5ae25383b9dc5463354de 211 SUPERFAMILY SSF51391 4 209 8.5E-63 T 01-11-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12990 0ac548459ca5ae25383b9dc5463354de 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 202 1.1E-61 T 01-11-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12990 0ac548459ca5ae25383b9dc5463354de 211 Pfam PF02581 Thiamine monophosphate synthase 6 191 8.5E-58 T 01-11-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_20175 dc4493a9431f15ad16865cfd7ea8639f 113 Gene3D G3DSA:1.10.10.10 2 112 2.1E-39 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_20175 dc4493a9431f15ad16865cfd7ea8639f 113 Pfam PF01638 HxlR-like helix-turn-helix 16 103 7.5E-37 T 01-11-2018 IPR002577 Helix-turn-helix, HxlR type DOE78_20175 dc4493a9431f15ad16865cfd7ea8639f 113 SUPERFAMILY SSF46785 3 103 1.8E-34 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_01190 18582b49e5a787f71ef9ca57685cbbee 392 Pfam PF01098 Cell cycle protein 15 382 1.2E-98 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_01190 18582b49e5a787f71ef9ca57685cbbee 392 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 382 2.8E-103 T 01-11-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_14930 d1ce6e2650c34338df6cb5d75a386c8d 232 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 70 4.6E-15 T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DOE78_14930 d1ce6e2650c34338df6cb5d75a386c8d 232 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DOE78_14930 d1ce6e2650c34338df6cb5d75a386c8d 232 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 12 169 3.3E-40 T 01-11-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 DOE78_14930 d1ce6e2650c34338df6cb5d75a386c8d 232 Gene3D G3DSA:1.20.120.1760 1 172 1.7E-14 T 01-11-2018 DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 SUPERFAMILY SSF46785 27 145 1.42E-29 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 Gene3D G3DSA:1.10.10.10 4 153 3.8E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.8E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 SMART SM00347 29 129 9.9E-26 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_21295 d0523b9e07912bfe87441f7a9ca247c9 153 Pfam PF01047 MarR family 36 94 9.2E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_21155 8abb05c68d42b891642416b7ff647042 222 Gene3D G3DSA:1.10.3720.10 10 222 2.0E-47 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21155 8abb05c68d42b891642416b7ff647042 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 222 3.5E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_21155 8abb05c68d42b891642416b7ff647042 222 SUPERFAMILY SSF161098 12 209 6.67E-45 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 23 2.0E-8 T 01-11-2018 IPR027399 Alcohol dehydrogenase GroES-associated DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 Pfam PF00107 Zinc-binding dehydrogenase 191 259 4.7E-8 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 SUPERFAMILY SSF50129 2 179 4.57E-57 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 141 4.7E-28 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 Gene3D G3DSA:3.40.50.720 171 340 3.9E-114 T 01-11-2018 DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 Gene3D G3DSA:3.90.180.10 4 367 3.9E-114 T 01-11-2018 DOE78_06870 76eb105fc78cbfafb2f984ff3e932579 380 SUPERFAMILY SSF51735 159 340 1.23E-44 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_07330 8298f3c793771138275bc06a872bbd41 223 Gene3D G3DSA:1.20.120.570 17 213 1.1E-51 T 01-11-2018 IPR036785 YkyA-like superfamily DOE78_07330 8298f3c793771138275bc06a872bbd41 223 SUPERFAMILY SSF140423 28 212 9.02E-50 T 01-11-2018 IPR036785 YkyA-like superfamily DOE78_07330 8298f3c793771138275bc06a872bbd41 223 Pfam PF10368 Putative cell-wall binding lipoprotein 15 216 4.8E-65 T 01-11-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like DOE78_14885 ce835883b09e356ce2c585840576dd8f 302 Gene3D G3DSA:3.40.50.300 1 236 3.3E-61 T 01-11-2018 DOE78_14885 ce835883b09e356ce2c585840576dd8f 302 SUPERFAMILY SSF52540 3 229 2.13E-62 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14885 ce835883b09e356ce2c585840576dd8f 302 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_14885 ce835883b09e356ce2c585840576dd8f 302 Pfam PF00005 ABC transporter 22 162 3.9E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14885 ce835883b09e356ce2c585840576dd8f 302 SMART SM00382 30 211 3.0E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 SUPERFAMILY SSF64518 1 405 1.57E-100 T 01-11-2018 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 Gene3D G3DSA:1.20.1330.10 42 354 4.1E-77 T 01-11-2018 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 Pfam PF00700 Bacterial flagellin C-terminal helical region 320 404 3.4E-27 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 Gene3D G3DSA:3.30.70.2120 177 303 4.1E-77 T 01-11-2018 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 PRINTS PR00207 Flagellin signature 109 132 4.2E-25 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 PRINTS PR00207 Flagellin signature 74 93 4.2E-25 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 PRINTS PR00207 Flagellin signature 35 52 4.2E-25 T 01-11-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 2.8E-47 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DOE78_22895 a14a0731a5450cd7204e18f8d77f6143 405 Gene3D G3DSA:1.10.8.410 355 405 3.6E-27 T 01-11-2018 DOE78_02340 a7e49dd47d01f039e065890cc2b513c1 239 Pfam PF04239 Protein of unknown function (DUF421) 89 204 1.6E-33 T 01-11-2018 IPR007353 Protein of unknown function DUF421 DOE78_02340 a7e49dd47d01f039e065890cc2b513c1 239 Gene3D G3DSA:3.30.240.20 170 229 3.2E-18 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_02340 a7e49dd47d01f039e065890cc2b513c1 239 Gene3D G3DSA:3.30.240.20 81 153 3.4E-24 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 SMART SM01230 113 361 3.3E-125 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 Pfam PF00120 Glutamine synthetase, catalytic domain 114 447 3.3E-133 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 SUPERFAMILY SSF55931 114 448 4.81E-120 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 25 107 6.0E-26 T 01-11-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 Gene3D G3DSA:3.30.590.10 116 451 1.5E-130 T 01-11-2018 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 ProSitePatterns PS00180 Glutamine synthetase signature 1. 59 77 - T 01-11-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 Gene3D G3DSA:3.10.20.70 10 115 1.6E-34 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 241 256 - T 01-11-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 15 448 6.9E-160 T 01-11-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_11065 f1f03bf9d4ede43525520a80a0004a40 451 SUPERFAMILY SSF54368 12 112 5.89E-27 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_00930 f3d21e49ec353e051b833a7ed1adce83 250 Gene3D G3DSA:3.20.20.370 48 249 2.0E-52 T 01-11-2018 DOE78_00930 f3d21e49ec353e051b833a7ed1adce83 250 Pfam PF01522 Polysaccharide deacetylase 51 172 1.6E-21 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DOE78_00930 f3d21e49ec353e051b833a7ed1adce83 250 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 52 239 1.4E-73 T 01-11-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB DOE78_00930 f3d21e49ec353e051b833a7ed1adce83 250 SUPERFAMILY SSF88713 52 239 5.19E-44 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_10410 791da6e418f28651f543ade89c4390f4 169 Pfam PF13302 Acetyltransferase (GNAT) domain 9 136 1.2E-12 T 01-11-2018 IPR000182 GNAT domain DOE78_10410 791da6e418f28651f543ade89c4390f4 169 Gene3D G3DSA:3.40.630.30 2 169 2.3E-33 T 01-11-2018 DOE78_10410 791da6e418f28651f543ade89c4390f4 169 SUPERFAMILY SSF55729 8 161 4.4E-29 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_04080 9d7c1787324531b818da303dfbac0464 375 PIRSF PIRSF000337 293 375 2.9E-20 T 01-11-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DOE78_04080 9d7c1787324531b818da303dfbac0464 375 PIRSF PIRSF000337 2 295 7.5E-80 T 01-11-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DOE78_04080 9d7c1787324531b818da303dfbac0464 375 Gene3D G3DSA:3.20.20.30 1 370 2.5E-121 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_04080 9d7c1787324531b818da303dfbac0464 375 SUPERFAMILY SSF51679 4 369 2.62E-99 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_04080 9d7c1787324531b818da303dfbac0464 375 Pfam PF00296 Luciferase-like monooxygenase 22 320 2.5E-48 T 01-11-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DOE78_04080 9d7c1787324531b818da303dfbac0464 375 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 292 2.2E-90 T 01-11-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DOE78_04645 41062e91f478de6d4cd4247b892ae923 288 Gene3D G3DSA:3.20.20.80 77 288 6.8E-62 T 01-11-2018 DOE78_04645 41062e91f478de6d4cd4247b892ae923 288 Pfam PF08924 Domain of unknown function (DUF1906) 104 204 2.6E-10 T 01-11-2018 IPR015020 Protein of unknown function DUF1906 DOE78_04645 41062e91f478de6d4cd4247b892ae923 288 SUPERFAMILY SSF51445 77 286 1.26E-35 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_09815 3fc601ce46c12aa01f6375334eeaed66 360 Gene3D G3DSA:3.30.70.270 187 359 1.2E-53 T 01-11-2018 DOE78_09815 3fc601ce46c12aa01f6375334eeaed66 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 352 1.4E-45 T 01-11-2018 IPR000160 GGDEF domain DOE78_09815 3fc601ce46c12aa01f6375334eeaed66 360 SMART SM00267 183 356 4.5E-57 T 01-11-2018 IPR000160 GGDEF domain DOE78_09815 3fc601ce46c12aa01f6375334eeaed66 360 Pfam PF07694 5TMR of 5TMR-LYT 22 177 4.7E-15 T 01-11-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DOE78_09815 3fc601ce46c12aa01f6375334eeaed66 360 SUPERFAMILY SSF55073 199 357 2.28E-45 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_09815 3fc601ce46c12aa01f6375334eeaed66 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 355 2.1E-51 T 01-11-2018 IPR000160 GGDEF domain DOE78_03885 45197943408fccc2a380ef567dab09b3 190 Pfam PF03861 ANTAR domain 134 185 7.2E-18 T 01-11-2018 IPR005561 ANTAR domain GO:0003723 DOE78_03885 45197943408fccc2a380ef567dab09b3 190 PIRSF PIRSF036382 1 190 1.3E-59 T 01-11-2018 IPR008327 Signal transduction response regulator, antiterminator DOE78_03885 45197943408fccc2a380ef567dab09b3 190 Gene3D G3DSA:1.10.10.10 133 190 8.1E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_03885 45197943408fccc2a380ef567dab09b3 190 SMART SM00448 4 115 1.2E-36 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03885 45197943408fccc2a380ef567dab09b3 190 SMART SM01012 131 186 1.3E-18 T 01-11-2018 IPR005561 ANTAR domain GO:0003723 DOE78_03885 45197943408fccc2a380ef567dab09b3 190 Pfam PF00072 Response regulator receiver domain 6 115 7.2E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03885 45197943408fccc2a380ef567dab09b3 190 Gene3D G3DSA:3.40.50.2300 2 127 2.6E-35 T 01-11-2018 DOE78_03885 45197943408fccc2a380ef567dab09b3 190 SUPERFAMILY SSF52172 3 184 1.85E-50 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_05425 630b90b30e0202078c01945a70fd256e 389 Pfam PF04285 Protein of unknown function (DUF444) 191 383 2.0E-67 T 01-11-2018 IPR006698 Uncharacterised protein family UPF0229 DOE78_05425 630b90b30e0202078c01945a70fd256e 389 Pfam PF04285 Protein of unknown function (DUF444) 12 185 6.0E-34 T 01-11-2018 IPR006698 Uncharacterised protein family UPF0229 DOE78_05425 630b90b30e0202078c01945a70fd256e 389 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 7 385 31.9 T 01-11-2018 IPR006698 Uncharacterised protein family UPF0229 DOE78_05425 630b90b30e0202078c01945a70fd256e 389 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 9 380 4.6E-182 T 01-11-2018 IPR014230 Sporulation protein YhbH DOE78_05010 07f3f441ae88533ac75a2d7fdf75f0aa 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 8 104 8.8E-28 T 01-11-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DOE78_05010 07f3f441ae88533ac75a2d7fdf75f0aa 107 SUPERFAMILY SSF50022 8 106 1.7E-30 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_05010 07f3f441ae88533ac75a2d7fdf75f0aa 107 Gene3D G3DSA:2.102.10.10 4 107 8.4E-26 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_05010 07f3f441ae88533ac75a2d7fdf75f0aa 107 Pfam PF00355 Rieske [2Fe-2S] domain 9 93 2.0E-14 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 SUPERFAMILY SSF53850 83 297 1.05E-21 T 01-11-2018 DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 SUPERFAMILY SSF46785 1 88 1.82E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 Gene3D G3DSA:1.10.10.10 1 82 3.6E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 Pfam PF03466 LysR substrate binding domain 120 296 2.3E-8 T 01-11-2018 IPR005119 LysR, substrate-binding DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 Gene3D G3DSA:3.40.190.10 169 271 2.2E-14 T 01-11-2018 DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-9 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.3E-17 T 01-11-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DOE78_22425 36cb5b8d108ff7d607b5e6d962e492cd 303 Gene3D G3DSA:3.40.190.10 118 291 2.2E-14 T 01-11-2018 DOE78_20260 6d589c14376f121ebc9581df8aba62af 330 Pfam PF07681 DoxX 203 268 6.3E-5 T 01-11-2018 IPR032808 DoxX family DOE78_22510 7c92f3e375092cd2f08e21328e6addb7 221 Gene3D G3DSA:3.40.960.10 22 140 1.2E-9 T 01-11-2018 DOE78_24010 0d440f803431a271977b12fcdd4e3731 244 Pfam PF14014 Protein of unknown function (DUF4230) 84 239 6.2E-32 T 01-11-2018 IPR025324 Protein of unknown function DUF4230 DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 SUPERFAMILY SSF52540 11 796 6.53E-79 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 Pfam PF12705 PD-(D/E)XK nuclease superfamily 927 1059 1.7E-6 T 01-11-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 Gene3D G3DSA:3.40.50.300 7 171 2.2E-23 T 01-11-2018 DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 Gene3D G3DSA:3.40.50.300 454 561 2.9E-9 T 01-11-2018 DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 Pfam PF13361 UvrD-like helicase C-terminal domain 396 793 9.4E-26 T 01-11-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 Gene3D G3DSA:3.40.50.300 286 415 1.1E-30 T 01-11-2018 DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 Gene3D G3DSA:3.90.320.10 875 1076 2.8E-7 T 01-11-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 SUPERFAMILY SSF52980 905 1064 9.65E-8 T 01-11-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DOE78_11350 5a407570d6672955f605e7e1610b2b29 1084 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 385 1.0E-36 T 01-11-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DOE78_21775 cd02032d0ed951225db3f2ff30056c28 326 SUPERFAMILY SSF161098 82 310 2.75E-46 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21775 cd02032d0ed951225db3f2ff30056c28 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 4.6E-13 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_21775 cd02032d0ed951225db3f2ff30056c28 326 Gene3D G3DSA:1.10.3720.10 78 323 1.2E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_15665 9ce4dbf0a8a607c1e5eded64f436938f 333 Gene3D G3DSA:3.40.190.10 47 330 7.9E-63 T 01-11-2018 DOE78_15665 9ce4dbf0a8a607c1e5eded64f436938f 333 Gene3D G3DSA:3.40.190.10 124 218 7.9E-63 T 01-11-2018 DOE78_15665 9ce4dbf0a8a607c1e5eded64f436938f 333 SUPERFAMILY SSF53850 47 265 5.31E-26 T 01-11-2018 DOE78_15665 9ce4dbf0a8a607c1e5eded64f436938f 333 Pfam PF09084 NMT1/THI5 like 53 250 1.3E-35 T 01-11-2018 IPR015168 SsuA/THI5-like DOE78_07050 8546b5ea8ece7237fc4b5930cb096ebc 303 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 240 294 1.1E-20 T 01-11-2018 IPR019264 Domain of unknown function DUF2179 DOE78_07050 8546b5ea8ece7237fc4b5930cb096ebc 303 Gene3D G3DSA:3.30.70.120 212 287 6.4E-25 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_07050 8546b5ea8ece7237fc4b5930cb096ebc 303 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 33 234 4.2E-68 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_07050 8546b5ea8ece7237fc4b5930cb096ebc 303 PIRSF PIRSF006483 12 302 6.6E-99 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_20510 2df58b3dd8f7887518f0f01cf2141cd6 295 Gene3D G3DSA:3.90.550.10 1 240 2.1E-30 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20510 2df58b3dd8f7887518f0f01cf2141cd6 295 SUPERFAMILY SSF53448 5 233 1.92E-33 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20510 2df58b3dd8f7887518f0f01cf2141cd6 295 Pfam PF00535 Glycosyl transferase family 2 6 120 7.9E-23 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 Pfam PF01595 Domain of unknown function DUF21 7 201 2.2E-48 T 01-11-2018 IPR002550 CNNM, transmembrane domain DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 SUPERFAMILY SSF54631 211 352 6.44E-33 T 01-11-2018 DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 Pfam PF00571 CBS domain 216 274 4.0E-9 T 01-11-2018 IPR000644 CBS domain DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 Pfam PF00571 CBS domain 290 337 0.0013 T 01-11-2018 IPR000644 CBS domain DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 Pfam PF03471 Transporter associated domain 356 434 6.3E-18 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 Gene3D G3DSA:3.30.465.10 347 436 4.4E-21 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 SMART SM01091 355 435 4.4E-20 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 Gene3D G3DSA:3.10.580.10 195 346 1.7E-54 T 01-11-2018 DOE78_14750 75516da573082e771b3ff9147de8e9f3 441 SUPERFAMILY SSF56176 354 434 3.54E-17 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_11025 aa86aec000b85212fcc27fe2040ed8ba 117 Pfam PF17428 Family of unknown function (DUF5412) 3 117 1.2E-44 T 01-11-2018 IPR035406 Protein of unknown function DUF5412 DOE78_18885 4e7d97f3652ce68ba228323f75d1fbb6 548 Gene3D G3DSA:3.30.420.240 364 534 3.6E-6 T 01-11-2018 DOE78_18885 4e7d97f3652ce68ba228323f75d1fbb6 548 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 397 532 2.4E-18 T 01-11-2018 IPR006517 Archaeophage PsiM2, terminase large subunit DOE78_11900 b6ad1726f477f53208a0e2f82b752bf6 438 SUPERFAMILY SSF103473 21 422 1.83E-42 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_11900 b6ad1726f477f53208a0e2f82b752bf6 438 Gene3D G3DSA:1.20.1250.20 227 423 7.5E-20 T 01-11-2018 DOE78_11900 b6ad1726f477f53208a0e2f82b752bf6 438 Gene3D G3DSA:1.20.1250.20 16 208 1.3E-13 T 01-11-2018 DOE78_11900 b6ad1726f477f53208a0e2f82b752bf6 438 Pfam PF07690 Major Facilitator Superfamily 40 377 9.3E-32 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_09020 d9c3be416f92c36ec060d3b4822ea9b2 743 Gene3D G3DSA:1.10.10.2840 601 732 4.0E-18 T 01-11-2018 DOE78_09020 d9c3be416f92c36ec060d3b4822ea9b2 743 Pfam PF13556 PucR C-terminal helix-turn-helix domain 670 728 1.5E-20 T 01-11-2018 IPR025736 PucR C-terminal helix-turn-helix domain DOE78_09020 d9c3be416f92c36ec060d3b4822ea9b2 743 Gene3D G3DSA:3.30.450.40 155 332 2.3E-16 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_09020 d9c3be416f92c36ec060d3b4822ea9b2 743 SUPERFAMILY SSF55781 178 330 2.16E-18 T 01-11-2018 DOE78_09020 d9c3be416f92c36ec060d3b4822ea9b2 743 Pfam PF13185 GAF domain 251 304 4.5E-8 T 01-11-2018 IPR003018 GAF domain GO:0005515 DOE78_21795 2e9628e43183fbf58bd44b7b3c23a1df 144 Pfam PF13115 YtkA-like 21 102 5.1E-8 T 01-11-2018 IPR032693 YtkA-like domain DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 01-11-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 Gene3D G3DSA:3.20.20.70 1 304 1.5E-98 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 SUPERFAMILY SSF51395 2 301 4.33E-88 T 01-11-2018 DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 41.532 T 01-11-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 Pfam PF01180 Dihydroorotate dehydrogenase 4 286 1.0E-94 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 PIRSF PIRSF000164 1 303 1.7E-85 T 01-11-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 01-11-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DOE78_07865 a838c645d691f8c3c4ad3b9711c70e82 313 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 302 2.3E-126 T 01-11-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DOE78_08845 22f7b8ee50e31304438a31f84894f7c3 357 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 195 356 1.2E-10 T 01-11-2018 IPR024534 Domain of unknown function DUF2220 DOE78_11675 b848b70d63562b85f710734e5149a53c 45 Pfam PF13790 SR1 protein 4 33 1.4E-8 T 01-11-2018 IPR025236 SR1 protein DOE78_23445 a133c70eb5befb12385f44ae9b6ef975 241 Pfam PF06283 Trehalose utilisation 3 218 1.5E-37 T 01-11-2018 IPR029010 ThuA-like domain DOE78_23445 a133c70eb5befb12385f44ae9b6ef975 241 Gene3D G3DSA:3.40.50.880 1 241 4.8E-118 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_23445 a133c70eb5befb12385f44ae9b6ef975 241 SUPERFAMILY SSF52317 3 236 6.41E-67 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_23445 a133c70eb5befb12385f44ae9b6ef975 241 PIRSF PIRSF030013 1 239 5.1E-132 T 01-11-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote DOE78_16730 54ea007d82da1b2d23c7056d8946c734 145 Pfam PF06491 Disulphide isomerase 8 142 2.6E-62 T 01-11-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DOE78_16730 54ea007d82da1b2d23c7056d8946c734 145 Gene3D G3DSA:3.40.30.10 25 142 3.4E-54 T 01-11-2018 DOE78_16730 54ea007d82da1b2d23c7056d8946c734 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 142 9.8E-63 T 01-11-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 Pfam PF00027 Cyclic nucleotide-binding domain 41 127 4.4E-21 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 SMART SM00419 179 228 2.0E-14 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 SUPERFAMILY SSF51206 16 156 1.57E-38 T 01-11-2018 IPR018490 Cyclic nucleotide-binding-like DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 SUPERFAMILY SSF46785 158 236 1.07E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 SMART SM00100 21 143 7.1E-21 T 01-11-2018 IPR000595 Cyclic nucleotide-binding domain DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 Gene3D G3DSA:2.60.120.1460 25 236 1.6E-64 T 01-11-2018 DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 201 216 1.4E-9 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 201 1.4E-9 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_04230 020be2f7df26e9b5ff31d44d448ca5f2 237 Pfam PF13545 Crp-like helix-turn-helix domain 161 235 1.5E-17 T 01-11-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DOE78_16460 e853a0a83f2c87a28671e723b2f68b12 152 SUPERFAMILY SSF46785 7 141 3.81E-39 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_16460 e853a0a83f2c87a28671e723b2f68b12 152 Gene3D G3DSA:3.30.1490.190 93 150 4.8E-16 T 01-11-2018 DOE78_16460 e853a0a83f2c87a28671e723b2f68b12 152 Gene3D G3DSA:1.10.10.10 1 88 3.6E-29 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16460 e853a0a83f2c87a28671e723b2f68b12 152 Pfam PF01475 Ferric uptake regulator family 15 136 1.8E-40 T 01-11-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DOE78_06475 5724b9aeae5f9312ac65b63865d8b8d0 268 SUPERFAMILY SSF53633 8 262 7.2E-69 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_06475 5724b9aeae5f9312ac65b63865d8b8d0 268 PIRSF PIRSF000728 2 260 1.1E-87 T 01-11-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_06475 5724b9aeae5f9312ac65b63865d8b8d0 268 TIGRFAM TIGR00761 argB: acetylglutamate kinase 14 242 2.0E-80 T 01-11-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_06475 5724b9aeae5f9312ac65b63865d8b8d0 268 Gene3D G3DSA:3.40.1160.10 3 266 1.2E-76 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_06475 5724b9aeae5f9312ac65b63865d8b8d0 268 Hamap MF_00082 Acetylglutamate kinase [argB]. 12 254 40.998 T 01-11-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DOE78_06475 5724b9aeae5f9312ac65b63865d8b8d0 268 Pfam PF00696 Amino acid kinase family 14 244 1.4E-45 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DOE78_03920 8f65153f49fbd2daac8f13e4298ea600 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 8.2E-54 T 01-11-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DOE78_03920 8f65153f49fbd2daac8f13e4298ea600 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.1E-17 T 01-11-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DOE78_23430 f4e6558bbbe94def1835adb64f5eba9e 322 SUPERFAMILY SSF51658 1 310 1.44E-49 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_23430 f4e6558bbbe94def1835adb64f5eba9e 322 Pfam PF07582 AP endonuclease family 2 C terminus 268 322 1.8E-21 T 01-11-2018 IPR011418 AP endonuclease, family 2, C-terminal DOE78_23430 f4e6558bbbe94def1835adb64f5eba9e 322 Gene3D G3DSA:3.20.20.150 1 316 6.2E-70 T 01-11-2018 DOE78_23430 f4e6558bbbe94def1835adb64f5eba9e 322 Pfam PF01261 Xylose isomerase-like TIM barrel 20 249 1.5E-29 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_08500 1354a8a355d2f91a97caf5b3c2b53853 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 329 4.5E-43 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_00895 4e9a13411b9ad461f52d5f2090d0b3b6 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.901 T 01-11-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DOE78_00895 4e9a13411b9ad461f52d5f2090d0b3b6 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 01-11-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DOE78_00895 4e9a13411b9ad461f52d5f2090d0b3b6 130 SUPERFAMILY SSF54211 5 130 2.35E-50 T 01-11-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DOE78_00895 4e9a13411b9ad461f52d5f2090d0b3b6 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.6E-48 T 01-11-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DOE78_00895 4e9a13411b9ad461f52d5f2090d0b3b6 130 Gene3D G3DSA:3.30.230.10 1 130 1.0E-53 T 01-11-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DOE78_06650 96e41b30a1386ca7c7faa500ac86b2b6 404 Pfam PF06054 Competence protein CoiA-like family 10 281 9.8E-49 T 01-11-2018 IPR010330 Competence-induced protein CoiA-like DOE78_06650 96e41b30a1386ca7c7faa500ac86b2b6 404 PIRSF PIRSF007487 9 395 2.3E-64 T 01-11-2018 IPR021176 Competence-induced protein CoiA DOE78_12595 205e00686cfe65615692dc981575d33d 184 SUPERFAMILY SSF56349 10 174 6.18E-32 T 01-11-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DOE78_12595 205e00686cfe65615692dc981575d33d 184 Gene3D G3DSA:1.10.443.10 5 182 2.1E-28 T 01-11-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DOE78_12595 205e00686cfe65615692dc981575d33d 184 Pfam PF00589 Phage integrase family 13 168 2.2E-21 T 01-11-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 Pfam PF06445 GyrI-like small molecule binding domain 130 291 6.7E-29 T 01-11-2018 IPR029442 GyrI-like small molecule binding domain DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 6.9E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 6.9E-7 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 Gene3D G3DSA:1.10.10.60 2 54 1.0E-16 T 01-11-2018 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 Pfam PF12833 Helix-turn-helix domain 27 105 2.7E-22 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 SUPERFAMILY SSF46689 57 107 1.12E-13 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 Gene3D G3DSA:1.10.10.60 55 108 7.2E-17 T 01-11-2018 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 SUPERFAMILY SSF55136 130 292 3.92E-31 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 SMART SM00342 21 104 1.8E-27 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 SUPERFAMILY SSF46689 7 55 5.64E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 Gene3D G3DSA:3.20.80.10 130 295 1.9E-44 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 SMART SM00871 130 291 1.8E-36 T 01-11-2018 IPR010499 Bacterial transcription activator, effector binding DOE78_04000 2f78ca98289f710fe7fe792c589665de 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_19465 fcade0a42bc281ec9b4af5c7df29b0f3 631 SUPERFAMILY SSF56235 1 224 2.32E-61 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_19465 fcade0a42bc281ec9b4af5c7df29b0f3 631 Pfam PF13537 Glutamine amidotransferase domain 51 168 5.3E-44 T 01-11-2018 IPR017932 Glutamine amidotransferase type 2 domain DOE78_19465 fcade0a42bc281ec9b4af5c7df29b0f3 631 SUPERFAMILY SSF52402 227 605 5.24E-89 T 01-11-2018 DOE78_19465 fcade0a42bc281ec9b4af5c7df29b0f3 631 Pfam PF00733 Asparagine synthase 240 610 3.4E-115 T 01-11-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DOE78_19465 fcade0a42bc281ec9b4af5c7df29b0f3 631 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 547 4.4E-172 T 01-11-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DOE78_19465 fcade0a42bc281ec9b4af5c7df29b0f3 631 PIRSF PIRSF001589 1 629 4.0E-198 T 01-11-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DOE78_19465 fcade0a42bc281ec9b4af5c7df29b0f3 631 Gene3D G3DSA:3.60.20.10 4 189 3.6E-62 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_21790 a86d5dc6127ae9d4f53ddf0930e8c956 592 Gene3D G3DSA:3.30.450.20 166 288 1.4E-12 T 01-11-2018 DOE78_21790 a86d5dc6127ae9d4f53ddf0930e8c956 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 584 2.8E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_21790 a86d5dc6127ae9d4f53ddf0930e8c956 592 Gene3D G3DSA:3.30.565.10 440 588 1.5E-15 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_21790 a86d5dc6127ae9d4f53ddf0930e8c956 592 SUPERFAMILY SSF55874 456 583 1.15E-14 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_21790 a86d5dc6127ae9d4f53ddf0930e8c956 592 Pfam PF06580 Histidine kinase 379 456 1.9E-19 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_21790 a86d5dc6127ae9d4f53ddf0930e8c956 592 Pfam PF02743 Cache domain 35 272 2.0E-16 T 01-11-2018 IPR033479 Double Cache domain 1 DOE78_12995 24d01ab5aee079b359812d8af05d9660 271 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 259 2.0E-111 T 01-11-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_12995 24d01ab5aee079b359812d8af05d9660 271 SUPERFAMILY SSF53613 3 261 2.03E-86 T 01-11-2018 IPR029056 Ribokinase-like DOE78_12995 24d01ab5aee079b359812d8af05d9660 271 Pfam PF08543 Phosphomethylpyrimidine kinase 12 257 2.6E-102 T 01-11-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DOE78_12995 24d01ab5aee079b359812d8af05d9660 271 Gene3D G3DSA:3.40.1190.20 1 268 2.9E-110 T 01-11-2018 IPR029056 Ribokinase-like DOE78_05140 64461d272a12ec4e6da7b71d6f09fd46 89 Pfam PF14043 WVELL protein 4 76 5.7E-37 T 01-11-2018 IPR026952 WVELL protein DOE78_08720 08aa594f5cffcd6a31869530db41d166 56 Gene3D G3DSA:1.20.58.990 3 54 1.5E-11 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_08720 08aa594f5cffcd6a31869530db41d166 56 SUPERFAMILY SSF140500 3 52 1.96E-13 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_08720 08aa594f5cffcd6a31869530db41d166 56 Pfam PF09388 Spo0E like sporulation regulatory protein 9 47 6.5E-14 T 01-11-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DOE78_08150 b5183b5eda8f17185a9a63ebb12e9940 130 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 127 4.2E-36 T 01-11-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DOE78_08150 b5183b5eda8f17185a9a63ebb12e9940 130 PIRSF PIRSF002889 2 129 2.3E-34 T 01-11-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DOE78_08150 b5183b5eda8f17185a9a63ebb12e9940 130 Pfam PF00460 Flagella basal body rod protein 8 38 2.6E-9 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DOE78_17700 32a9b00b19fcea932b441c71f3de91ff 359 Pfam PF01594 AI-2E family transporter 20 343 1.3E-76 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like DOE78_17910 7aa3faf660fa4b6694e6600692974ac1 152 PIRSF PIRSF025624 2 151 5.6E-61 T 01-11-2018 IPR008310 UPF0735 ACT domain-containing protein DOE78_17910 7aa3faf660fa4b6694e6600692974ac1 152 Hamap MF_00707 UPF0735 ACT domain-containing protein . 7 151 32.924 T 01-11-2018 IPR008310 UPF0735 ACT domain-containing protein DOE78_17910 7aa3faf660fa4b6694e6600692974ac1 152 SUPERFAMILY SSF55021 75 148 5.86E-11 T 01-11-2018 DOE78_17910 7aa3faf660fa4b6694e6600692974ac1 152 Pfam PF01842 ACT domain 75 134 1.6E-7 T 01-11-2018 IPR002912 ACT domain DOE78_17910 7aa3faf660fa4b6694e6600692974ac1 152 Gene3D G3DSA:3.30.70.260 73 150 8.1E-7 T 01-11-2018 DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 Gene3D G3DSA:3.30.450.20 97 212 5.3E-12 T 01-11-2018 DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 Pfam PF12282 Signal transduction histidine kinase 4 142 1.7E-25 T 01-11-2018 IPR022066 Signal transduction histidine kinase, N-terminal DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 352 9.2E-8 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 Gene3D G3DSA:3.30.565.10 218 357 4.0E-24 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 SMART SM00387 256 355 1.0E-9 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 SMART SM00911 161 250 0.0021 T 01-11-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 Pfam PF07568 Histidine kinase 161 234 1.9E-24 T 01-11-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain DOE78_03880 9456d89df9ebc421424bb0263312af1a 359 SUPERFAMILY SSF55874 238 353 5.76E-15 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 Pfam PF00067 Cytochrome P450 37 378 4.6E-31 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 Gene3D G3DSA:1.10.630.10 7 406 5.6E-129 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 349 358 - T 01-11-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 SUPERFAMILY SSF48264 17 405 4.71E-96 T 01-11-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00385 P450 superfamily signature 281 292 2.6E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00385 P450 superfamily signature 356 367 2.6E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00385 P450 superfamily signature 246 263 2.6E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00385 P450 superfamily signature 347 356 2.6E-5 T 01-11-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 326 341 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 200 222 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 298 325 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 281 292 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 356 367 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 347 356 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 140 156 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 157 172 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_13810 c4a091f34d38f1bd9c1fe54b5a697fcb 406 PRINTS PR00359 B-class P450 signature 94 105 1.5E-54 T 01-11-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 SMART SM00388 153 216 3.3E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 Gene3D G3DSA:3.30.565.10 217 362 1.9E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 360 9.9E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 SUPERFAMILY SSF55785 28 127 5.96E-7 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 155 213 1.0E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 Gene3D G3DSA:1.10.287.130 140 214 1.7E-15 T 01-11-2018 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 SMART SM00387 258 364 1.6E-26 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 SUPERFAMILY SSF55874 219 360 1.7E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 Gene3D G3DSA:3.30.450.20 26 130 4.8E-7 T 01-11-2018 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 8.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 324 8.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 8.7E-9 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_04760 9481425b663d4e495a8a7a2f53d1fca8 369 SUPERFAMILY SSF47384 141 216 2.16E-12 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_17780 c6757caf0d75683c88923a0834b9c54d 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 7.1E-63 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DOE78_17780 c6757caf0d75683c88923a0834b9c54d 146 Gene3D G3DSA:3.50.80.10 1 146 3.8E-60 T 01-11-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DOE78_17780 c6757caf0d75683c88923a0834b9c54d 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 3.7E-58 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DOE78_17780 c6757caf0d75683c88923a0834b9c54d 146 SUPERFAMILY SSF69500 1 144 1.23E-58 T 01-11-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DOE78_17780 c6757caf0d75683c88923a0834b9c54d 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.803 T 01-11-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DOE78_22710 3a27a1c4570f8f18107f1a4bd29e96ad 297 Pfam PF02687 FtsX-like permease family 200 290 2.6E-6 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_22710 3a27a1c4570f8f18107f1a4bd29e96ad 297 PIRSF PIRSF003097 1 297 3.0E-86 T 01-11-2018 IPR004513 Cell division protein FtsX GO:0016021 DOE78_22710 3a27a1c4570f8f18107f1a4bd29e96ad 297 Gene3D G3DSA:3.30.70.3040 48 152 1.0E-5 T 01-11-2018 DOE78_06835 c7b2d00eacf3c3126bf504f91b7f12e3 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 7 214 4.9E-60 T 01-11-2018 IPR005744 Hly-III GO:0016021|GO:0019835 DOE78_06835 c7b2d00eacf3c3126bf504f91b7f12e3 215 Pfam PF03006 Haemolysin-III related 3 207 1.3E-44 T 01-11-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 DOE78_11410 88c873e7107824820ecbe01b395e16df 112 Pfam PF08863 YolD-like protein 17 108 4.8E-24 T 01-11-2018 IPR014962 YolD-like protein DOE78_20255 a9d204f2fcae8bf8be888eb1a9e05489 455 Gene3D G3DSA:1.20.1740.10 8 452 7.5E-66 T 01-11-2018 DOE78_20255 a9d204f2fcae8bf8be888eb1a9e05489 455 PIRSF PIRSF006060 1 451 3.1E-63 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_20255 a9d204f2fcae8bf8be888eb1a9e05489 455 Pfam PF00324 Amino acid permease 17 410 2.0E-37 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 SUPERFAMILY SSF53774 2 330 5.89E-95 T 01-11-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 7.4E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 7.4E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 7.4E-15 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 Gene3D G3DSA:3.40.50.1170 1 200 1.0E-65 T 01-11-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 Pfam PF00710 Asparaginase, N-terminal 3 184 1.0E-62 T 01-11-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 SMART SM00870 3 316 9.9E-107 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 01-11-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 Gene3D G3DSA:3.40.50.40 201 334 6.5E-34 T 01-11-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 PIRSF PIRSF500176 1 325 2.9E-99 T 01-11-2018 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 PIRSF PIRSF001220 1 326 5.9E-90 T 01-11-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 327 1.1E-120 T 01-11-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 DOE78_01555 d53508b69d82b7d54b2f6462bc19d0f5 347 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 01-11-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DOE78_04225 cfa58ba528f2a9a60a89e994b52e405a 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 01-11-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 DOE78_04225 cfa58ba528f2a9a60a89e994b52e405a 54 SUPERFAMILY SSF57802 1 53 8.25E-22 T 01-11-2018 DOE78_04225 cfa58ba528f2a9a60a89e994b52e405a 54 Gene3D G3DSA:2.20.28.10 1 54 3.1E-24 T 01-11-2018 DOE78_04225 cfa58ba528f2a9a60a89e994b52e405a 54 PIRSF PIRSF000071 1 54 3.0E-25 T 01-11-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 DOE78_04225 cfa58ba528f2a9a60a89e994b52e405a 54 PRINTS PR00163 Rubredoxin signature 3 19 1.8E-11 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 DOE78_04225 cfa58ba528f2a9a60a89e994b52e405a 54 PRINTS PR00163 Rubredoxin signature 33 49 1.8E-11 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 DOE78_04225 cfa58ba528f2a9a60a89e994b52e405a 54 Pfam PF00301 Rubredoxin 3 49 1.5E-20 T 01-11-2018 IPR024935 Rubredoxin domain GO:0005506 DOE78_14420 6825bcb92e4342796c66e9f217e0f994 726 Gene3D G3DSA:3.40.50.300 406 614 4.3E-30 T 01-11-2018 DOE78_14420 6825bcb92e4342796c66e9f217e0f994 726 Gene3D G3DSA:3.40.50.300 104 382 2.0E-42 T 01-11-2018 DOE78_14420 6825bcb92e4342796c66e9f217e0f994 726 SUPERFAMILY SSF52540 154 588 7.59E-39 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_14420 6825bcb92e4342796c66e9f217e0f994 726 Pfam PF13087 AAA domain 397 580 5.2E-24 T 01-11-2018 DOE78_14420 6825bcb92e4342796c66e9f217e0f994 726 Pfam PF13086 AAA domain 155 364 6.0E-27 T 01-11-2018 DOE78_19565 42b4e22d726fb9bdf9458a891791be82 453 PIRSF PIRSF006446 1 450 6.9E-116 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DOE78_19565 42b4e22d726fb9bdf9458a891791be82 453 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 432 3.8E-125 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DOE78_03180 5bfa44e3fc9bb77d2f5b9a393baf5f22 488 Pfam PF01425 Amidase 35 425 2.5E-87 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_03180 5bfa44e3fc9bb77d2f5b9a393baf5f22 488 Pfam PF01425 Amidase 433 468 1.2E-4 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_03180 5bfa44e3fc9bb77d2f5b9a393baf5f22 488 SUPERFAMILY SSF75304 22 485 8.37E-110 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_03180 5bfa44e3fc9bb77d2f5b9a393baf5f22 488 Gene3D G3DSA:3.90.1300.10 2 486 9.9E-184 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_17255 09048f8e9a68b8f2866d2859c42f0f42 256 Pfam PF06691 Protein of unknown function (DUF1189) 4 246 4.1E-76 T 01-11-2018 IPR009574 Protein of unknown function DUF1189 DOE78_21180 f5425e87626715a8994c7ed321a9dc60 118 SMART SM00493 7 81 0.0029 T 01-11-2018 IPR006171 TOPRIM domain DOE78_21180 f5425e87626715a8994c7ed321a9dc60 118 Gene3D G3DSA:3.40.1360.20 4 118 1.5E-42 T 01-11-2018 DOE78_21180 f5425e87626715a8994c7ed321a9dc60 118 SUPERFAMILY SSF110455 5 112 4.45E-33 T 01-11-2018 DOE78_15410 3af1655bfd15399ee505641d1255b256 71 SUPERFAMILY SSF47406 28 58 1.57E-6 T 01-11-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 DOE78_15410 3af1655bfd15399ee505641d1255b256 71 Pfam PF08671 Anti-repressor SinI 28 54 4.8E-10 T 01-11-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 DOE78_07290 d9a711228727b8c6f5bc93b3c1bb64c5 180 Pfam PF00578 AhpC/TSA family 6 141 3.0E-36 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_07290 d9a711228727b8c6f5bc93b3c1bb64c5 180 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 180 1.1E-4 T 01-11-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_07290 d9a711228727b8c6f5bc93b3c1bb64c5 180 Gene3D G3DSA:3.40.30.10 1 180 7.9E-72 T 01-11-2018 DOE78_07290 d9a711228727b8c6f5bc93b3c1bb64c5 180 SUPERFAMILY SSF52833 5 179 1.34E-56 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_07290 d9a711228727b8c6f5bc93b3c1bb64c5 180 PIRSF PIRSF000239 1 180 1.3E-57 T 01-11-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_23330 2b5b8201bd10b18772f643e25e673f8a 128 Gene3D G3DSA:3.10.180.10 8 127 1.6E-31 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_23330 2b5b8201bd10b18772f643e25e673f8a 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 8.5E-19 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_23330 2b5b8201bd10b18772f643e25e673f8a 128 SUPERFAMILY SSF54593 3 127 4.83E-32 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 Gene3D G3DSA:3.30.565.10 540 691 4.3E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 SMART SM00388 471 536 1.4E-15 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 Gene3D G3DSA:1.10.287.130 412 531 1.6E-19 T 01-11-2018 DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 Pfam PF00512 His Kinase A (phospho-acceptor) domain 472 535 3.7E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 SUPERFAMILY SSF47384 459 537 8.83E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 587 674 2.7E-6 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 SMART SM00387 582 691 5.3E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_03740 8fa1a39961cec46d433a7ac2f09a9a9c 692 SUPERFAMILY SSF55874 540 674 3.59E-17 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10245 9d2ce22f76287789675fddfd43a8b0dd 307 Pfam PF01925 Sulfite exporter TauE/SafE 8 245 1.1E-38 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DOE78_12035 0b3ca01392093e944bb921950957404f 360 Gene3D G3DSA:2.130.10.10 253 360 1.6E-25 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DOE78_12035 0b3ca01392093e944bb921950957404f 360 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 151 184 1.2E-9 T 01-11-2018 IPR011964 YVTN beta-propeller repeat DOE78_12035 0b3ca01392093e944bb921950957404f 360 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 320 359 1.3E-8 T 01-11-2018 IPR011964 YVTN beta-propeller repeat DOE78_12035 0b3ca01392093e944bb921950957404f 360 Pfam PF10282 Lactonase, 7-bladed beta-propeller 133 254 7.7E-8 T 01-11-2018 IPR019405 Lactonase, 7-bladed beta propeller DOE78_12035 0b3ca01392093e944bb921950957404f 360 Gene3D G3DSA:2.130.10.10 114 239 1.2E-32 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DOE78_12035 0b3ca01392093e944bb921950957404f 360 SUPERFAMILY SSF50974 55 358 1.67E-63 T 01-11-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DOE78_02410 6ec4fac6315ee60a8d33c25e965637a3 445 Gene3D G3DSA:2.115.10.20 20 445 2.5E-145 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_02410 6ec4fac6315ee60a8d33c25e965637a3 445 SUPERFAMILY SSF75005 31 438 6.57E-59 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_02410 6ec4fac6315ee60a8d33c25e965637a3 445 Pfam PF02435 Levansucrase/Invertase 32 442 1.1E-101 T 01-11-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 DOE78_13555 d7ed8e72ab3d55458a4d34b111847679 281 Pfam PF00583 Acetyltransferase (GNAT) family 164 270 2.7E-16 T 01-11-2018 IPR000182 GNAT domain DOE78_13555 d7ed8e72ab3d55458a4d34b111847679 281 SUPERFAMILY SSF55729 52 277 4.36E-24 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_13555 d7ed8e72ab3d55458a4d34b111847679 281 Gene3D G3DSA:3.40.630.30 129 279 7.5E-22 T 01-11-2018 DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 SUPERFAMILY SSF51735 3 258 5.51E-62 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 Pfam PF00106 short chain dehydrogenase 4 191 3.6E-48 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 Gene3D G3DSA:3.40.50.720 2 264 2.4E-68 T 01-11-2018 DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.7E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.7E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.7E-11 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.7E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.7E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.7E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.7E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_14375 dbe4410dbbd9f7a7a07ad481f5c33dd1 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.7E-26 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_04715 8e48a69ba28cac317914517629b65922 466 Gene3D G3DSA:1.20.1740.10 6 462 5.6E-64 T 01-11-2018 DOE78_04715 8e48a69ba28cac317914517629b65922 466 ProSitePatterns PS00218 Amino acid permeases signature. 39 70 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DOE78_04715 8e48a69ba28cac317914517629b65922 466 PIRSF PIRSF006060 1 465 4.6E-77 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_04715 8e48a69ba28cac317914517629b65922 466 Pfam PF00324 Amino acid permease 14 449 1.6E-115 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_21725 44af8c663e2d622b7a63883a9c24fcb3 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 268 4.5E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_21725 44af8c663e2d622b7a63883a9c24fcb3 274 SUPERFAMILY SSF161098 3 273 1.7E-75 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21725 44af8c663e2d622b7a63883a9c24fcb3 274 Gene3D G3DSA:1.10.3720.10 1 266 5.1E-72 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11650 e869d472b01a87df236ccd113483b3a4 477 Gene3D G3DSA:1.20.1250.20 254 462 7.4E-10 T 01-11-2018 DOE78_11650 e869d472b01a87df236ccd113483b3a4 477 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 38 470 8.5E-115 T 01-11-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 DOE78_11650 e869d472b01a87df236ccd113483b3a4 477 Pfam PF13347 MFS/sugar transport protein 39 459 1.2E-95 T 01-11-2018 DOE78_11650 e869d472b01a87df236ccd113483b3a4 477 Gene3D G3DSA:1.20.1250.20 30 239 3.3E-17 T 01-11-2018 DOE78_11650 e869d472b01a87df236ccd113483b3a4 477 SUPERFAMILY SSF103473 33 460 1.05E-38 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_03060 27c8f8c12d56e6f9647ee1ed33709d7a 112 Gene3D G3DSA:2.60.120.10 1 102 2.9E-18 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_03060 27c8f8c12d56e6f9647ee1ed33709d7a 112 SUPERFAMILY SSF51182 3 99 2.72E-14 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_03060 27c8f8c12d56e6f9647ee1ed33709d7a 112 Pfam PF07883 Cupin domain 36 98 1.7E-7 T 01-11-2018 IPR013096 Cupin 2, conserved barrel DOE78_08185 10c43a2f9098113b07b15e87a60b08f1 147 Pfam PF02050 Flagellar FliJ protein 20 142 5.4E-21 T 01-11-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DOE78_08185 10c43a2f9098113b07b15e87a60b08f1 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 142 6.4E-25 T 01-11-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DOE78_00705 2aee384997c348426901167fafc99073 359 Pfam PF01384 Phosphate transporter family 18 310 1.2E-43 T 01-11-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DOE78_05040 aa37ecd9856d89a50e9304ad2d29b75a 143 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 133 8.9E-13 T 01-11-2018 IPR028973 PhnB-like DOE78_05040 aa37ecd9856d89a50e9304ad2d29b75a 143 SUPERFAMILY SSF54593 3 135 2.14E-34 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_05040 aa37ecd9856d89a50e9304ad2d29b75a 143 Gene3D G3DSA:3.10.180.10 7 143 2.4E-48 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_14175 12e51144464a51e35fda696e1e3530b7 320 SUPERFAMILY SSF51569 8 303 1.57E-67 T 01-11-2018 DOE78_14175 12e51144464a51e35fda696e1e3530b7 320 Pfam PF00682 HMGL-like 14 287 2.5E-49 T 01-11-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DOE78_14175 12e51144464a51e35fda696e1e3530b7 320 Gene3D G3DSA:3.20.20.70 6 305 7.0E-113 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_16180 4d810e538da99f9b3b09f8ba42c67fa1 59 Pfam PF17313 Family of unknown function (DUF5359) 1 56 2.9E-25 T 01-11-2018 IPR035281 Protein of unknown function DUF5359 DOE78_16180 4d810e538da99f9b3b09f8ba42c67fa1 59 ProDom PD052359 YPFB 1 57 7.0E-7 T 01-11-2018 IPR035281 Protein of unknown function DUF5359 DOE78_10945 566188731e87f95598ce0c408c729828 108 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 5 98 2.6E-36 T 01-11-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DOE78_10945 566188731e87f95598ce0c408c729828 108 PIRSF PIRSF000699 1 105 4.3E-38 T 01-11-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DOE78_10945 566188731e87f95598ce0c408c729828 108 Gene3D G3DSA:1.20.58.280 1 102 2.1E-39 T 01-11-2018 DOE78_10945 566188731e87f95598ce0c408c729828 108 SUPERFAMILY SSF46973 2 98 2.75E-35 T 01-11-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DOE78_08355 21a7d6331afa3954003b2be07c52c039 419 Pfam PF02163 Peptidase family M50 6 405 1.6E-79 T 01-11-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DOE78_08355 21a7d6331afa3954003b2be07c52c039 419 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 418 3.7E-116 T 01-11-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DOE78_08355 21a7d6331afa3954003b2be07c52c039 419 SMART SM00228 184 258 1.1E-5 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_08355 21a7d6331afa3954003b2be07c52c039 419 Gene3D G3DSA:2.30.42.10 200 291 2.5E-19 T 01-11-2018 DOE78_08355 21a7d6331afa3954003b2be07c52c039 419 SUPERFAMILY SSF50156 173 267 1.84E-16 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_11375 10c3ff635917537d314ae954cd81fc08 78 SUPERFAMILY SSF54593 1 73 5.72E-15 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_11375 10c3ff635917537d314ae954cd81fc08 78 Gene3D G3DSA:3.10.180.70 1 77 6.2E-26 T 01-11-2018 DOE78_11375 10c3ff635917537d314ae954cd81fc08 78 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 1 33 2.7E-11 T 01-11-2018 IPR028973 PhnB-like DOE78_22955 dfa780209ae4a37c39f7a7c0b8ac7a62 278 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 277 3.6E-101 T 01-11-2018 IPR003797 DegV DOE78_22955 dfa780209ae4a37c39f7a7c0b8ac7a62 278 SUPERFAMILY SSF82549 1 278 8.89E-99 T 01-11-2018 DOE78_22955 dfa780209ae4a37c39f7a7c0b8ac7a62 278 Gene3D G3DSA:3.30.1180.10 151 278 1.2E-45 T 01-11-2018 DOE78_22955 dfa780209ae4a37c39f7a7c0b8ac7a62 278 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 275 2.5E-108 T 01-11-2018 IPR003797 DegV DOE78_22955 dfa780209ae4a37c39f7a7c0b8ac7a62 278 Gene3D G3DSA:3.40.50.10170 1 150 2.9E-56 T 01-11-2018 DOE78_01905 d052673d733bd823638256a21c8124b3 230 Pfam PF01884 PcrB family 2 223 4.3E-81 T 01-11-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 DOE78_01905 d052673d733bd823638256a21c8124b3 230 SUPERFAMILY SSF51395 4 224 3.48E-54 T 01-11-2018 DOE78_01905 d052673d733bd823638256a21c8124b3 230 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 8 223 1.2E-75 T 01-11-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 DOE78_01905 d052673d733bd823638256a21c8124b3 230 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 28.874 T 01-11-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 DOE78_01905 d052673d733bd823638256a21c8124b3 230 Gene3D G3DSA:3.20.20.390 1 229 6.2E-96 T 01-11-2018 IPR038597 GGGP/HepGP synthase superfamily DOE78_12655 ef6e251883981d3d1e702e0119f3b1e0 273 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 11 264 6.0E-88 T 01-11-2018 DOE78_12655 ef6e251883981d3d1e702e0119f3b1e0 273 Pfam PF12787 EcsC protein family 12 261 1.2E-76 T 01-11-2018 IPR024787 EcsC protein DOE78_20285 c783e48056b7b73f11d7c863ad78080f 287 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 15 176 3.1E-26 T 01-11-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 DOE78_20285 c783e48056b7b73f11d7c863ad78080f 287 SUPERFAMILY SSF56176 14 175 2.36E-27 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_20285 c783e48056b7b73f11d7c863ad78080f 287 SMART SM01092 182 285 3.4E-8 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DOE78_20285 c783e48056b7b73f11d7c863ad78080f 287 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 184 278 1.1E-14 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DOE78_20285 c783e48056b7b73f11d7c863ad78080f 287 Gene3D G3DSA:3.30.465.10 12 177 4.6E-31 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_20285 c783e48056b7b73f11d7c863ad78080f 287 SUPERFAMILY SSF55447 181 284 1.44E-17 T 01-11-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DOE78_20285 c783e48056b7b73f11d7c863ad78080f 287 Gene3D G3DSA:3.30.390.50 184 283 6.7E-16 T 01-11-2018 DOE78_19925 6eb254fe994976e47b0495dac3ec804f 271 Pfam PF03618 Kinase/pyrophosphorylase 7 262 1.3E-95 T 01-11-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DOE78_19925 6eb254fe994976e47b0495dac3ec804f 271 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 5 267 58.259 T 01-11-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein DOE78_16200 ebbdd4ef44d4bb86c8c988cdba464c11 230 Pfam PF13367 Protease prsW family 28 200 2.0E-34 T 01-11-2018 IPR026898 Protease PrsW GO:0008233 DOE78_16200 ebbdd4ef44d4bb86c8c988cdba464c11 230 PIRSF PIRSF016933 1 220 7.5E-84 T 01-11-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 DOE78_20140 9533dfc4fe14cc55ab0d7a06c2bed37b 287 Gene3D G3DSA:3.90.25.10 139 269 3.2E-88 T 01-11-2018 DOE78_20140 9533dfc4fe14cc55ab0d7a06c2bed37b 287 Pfam PF05368 NmrA-like family 4 218 3.2E-23 T 01-11-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 DOE78_20140 9533dfc4fe14cc55ab0d7a06c2bed37b 287 Gene3D G3DSA:3.40.50.720 4 268 3.2E-88 T 01-11-2018 DOE78_20140 9533dfc4fe14cc55ab0d7a06c2bed37b 287 SUPERFAMILY SSF51735 3 245 1.21E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 810 25.12 T 01-11-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Gene3D G3DSA:1.10.268.10 370 459 8.5E-220 T 01-11-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 SUPERFAMILY SSF56719 31 488 7.46E-183 T 01-11-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Gene3D G3DSA:2.120.10.90 497 808 1.0E-126 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Gene3D G3DSA:3.30.1360.40 237 333 8.5E-220 T 01-11-2018 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 SMART SM00434 12 465 2.0E-295 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 2.5E-161 T 01-11-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 808 0.0 T 01-11-2018 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 1.1E-9 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 710 756 3.7E-15 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 761 806 6.6E-11 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 655 9.2E-7 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 705 3.9E-15 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 5.3E-13 T 01-11-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 Gene3D G3DSA:3.90.199.10 33 486 8.5E-220 T 01-11-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DOE78_00035 8761d2eb01dde391a73d52aec7909997 838 SUPERFAMILY SSF101904 500 819 1.83E-113 T 01-11-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DOE78_24285 81ffd7859f564231e3d36219b9a094c7 122 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_24285 81ffd7859f564231e3d36219b9a094c7 122 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 2.2E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_24285 81ffd7859f564231e3d36219b9a094c7 122 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 34 4.3E-9 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_24285 81ffd7859f564231e3d36219b9a094c7 122 SUPERFAMILY SSF54523 16 77 1.52E-14 T 01-11-2018 DOE78_24285 81ffd7859f564231e3d36219b9a094c7 122 Gene3D G3DSA:3.30.700.10 16 122 9.0E-16 T 01-11-2018 DOE78_04975 f3a806f72f10020ce7010457790c6224 295 SUPERFAMILY SSF161098 23 295 1.87E-70 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04975 f3a806f72f10020ce7010457790c6224 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 288 1.7E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_04975 f3a806f72f10020ce7010457790c6224 295 Gene3D G3DSA:1.10.3720.10 18 282 7.9E-61 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_23625 6a542d544cee390303581d88a5210ba8 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 8.1E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23625 6a542d544cee390303581d88a5210ba8 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 247 271 8.1E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23625 6a542d544cee390303581d88a5210ba8 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 8.1E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23625 6a542d544cee390303581d88a5210ba8 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 335 354 8.1E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23625 6a542d544cee390303581d88a5210ba8 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 387 413 8.1E-38 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23625 6a542d544cee390303581d88a5210ba8 498 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 493 7.4E-144 T 01-11-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23625 6a542d544cee390303581d88a5210ba8 498 Pfam PF00361 Proton-conducting membrane transporter 134 427 3.9E-67 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_04375 ac172a758f012aeb648ab46597c6af84 502 Gene3D G3DSA:3.20.20.80 19 382 2.1E-229 T 01-11-2018 DOE78_04375 ac172a758f012aeb648ab46597c6af84 502 SUPERFAMILY SSF51011 370 499 1.91E-44 T 01-11-2018 DOE78_04375 ac172a758f012aeb648ab46597c6af84 502 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 292 492 1.5E-39 T 01-11-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DOE78_04375 ac172a758f012aeb648ab46597c6af84 502 SMART SM00813 292 492 2.3E-87 T 01-11-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DOE78_04375 ac172a758f012aeb648ab46597c6af84 502 SUPERFAMILY SSF51445 18 382 6.21E-114 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_04375 ac172a758f012aeb648ab46597c6af84 502 Gene3D G3DSA:2.60.40.1180 9 496 2.1E-229 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_06925 c6f875d9396ffbd3bfcab105622547ae 331 Gene3D G3DSA:3.40.190.10 117 219 1.4E-107 T 01-11-2018 DOE78_06925 c6f875d9396ffbd3bfcab105622547ae 331 Pfam PF09084 NMT1/THI5 like 46 259 1.1E-75 T 01-11-2018 IPR015168 SsuA/THI5-like DOE78_06925 c6f875d9396ffbd3bfcab105622547ae 331 SUPERFAMILY SSF53850 38 320 1.2E-49 T 01-11-2018 DOE78_06925 c6f875d9396ffbd3bfcab105622547ae 331 Gene3D G3DSA:3.40.190.10 41 328 1.4E-107 T 01-11-2018 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 2.0E-50 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 1.9E-50 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 SUPERFAMILY SSF47928 1 106 2.09E-24 T 01-11-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.4E-24 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 PRINTS PR00125 ATP synthase delta subunit signature 6 25 1.4E-24 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.4E-24 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.4E-24 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.4E-24 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 20.816 T 01-11-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 Gene3D G3DSA:1.10.520.20 5 97 2.6E-12 T 01-11-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23695 cdf973039ef9af456936ea6ab6823b93 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 01-11-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 Gene3D G3DSA:1.10.287.130 318 376 2.5E-14 T 01-11-2018 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 SMART SM00387 424 531 3.1E-24 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 Gene3D G3DSA:3.30.450.40 2 186 2.5E-31 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 529 1.2E-17 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 3.7E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 3.7E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 3.7E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 3.7E-18 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 SUPERFAMILY SSF55874 373 529 3.54E-32 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 Pfam PF00512 His Kinase A (phospho-acceptor) domain 316 375 6.2E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 SUPERFAMILY SSF47384 308 376 1.37E-11 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 SUPERFAMILY SSF55785 208 307 3.49E-5 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 Gene3D G3DSA:3.30.565.10 382 533 9.2E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10050 69f8063543e75c24cec0b8759f0f5c08 533 SMART SM00388 314 379 9.2E-11 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_24645 60b8d29d3833450785bfe8ea238cead5 173 SUPERFAMILY SSF48317 7 171 6.8E-36 T 01-11-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DOE78_24645 60b8d29d3833450785bfe8ea238cead5 173 SMART SM00014 61 169 1.3E-19 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE78_24645 60b8d29d3833450785bfe8ea238cead5 173 Gene3D G3DSA:1.20.144.10 4 173 1.2E-19 T 01-11-2018 DOE78_24645 60b8d29d3833450785bfe8ea238cead5 173 Pfam PF01569 PAP2 superfamily 61 170 3.3E-20 T 01-11-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DOE78_09065 7430b3901df9bc2f3d87ba455be40bd4 342 Pfam PF02780 Transketolase, C-terminal domain 206 328 6.1E-42 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_09065 7430b3901df9bc2f3d87ba455be40bd4 342 Gene3D G3DSA:3.40.50.970 3 204 4.8E-79 T 01-11-2018 DOE78_09065 7430b3901df9bc2f3d87ba455be40bd4 342 Pfam PF02779 Transketolase, pyrimidine binding domain 4 192 1.1E-54 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_09065 7430b3901df9bc2f3d87ba455be40bd4 342 SUPERFAMILY SSF52518 2 216 1.67E-63 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_09065 7430b3901df9bc2f3d87ba455be40bd4 342 SMART SM00861 5 192 4.5E-60 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_09065 7430b3901df9bc2f3d87ba455be40bd4 342 Gene3D G3DSA:3.40.50.920 205 337 4.8E-48 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_09065 7430b3901df9bc2f3d87ba455be40bd4 342 SUPERFAMILY SSF52922 201 336 1.7E-41 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_00245 15b80328e4cea73823c94565656c4d77 255 PIRSF PIRSF005902 1 255 7.9E-91 T 01-11-2018 IPR001130 TatD family GO:0016788 DOE78_00245 15b80328e4cea73823c94565656c4d77 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DOE78_00245 15b80328e4cea73823c94565656c4d77 255 Gene3D G3DSA:3.20.20.140 1 255 1.4E-111 T 01-11-2018 DOE78_00245 15b80328e4cea73823c94565656c4d77 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.7E-102 T 01-11-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DOE78_00245 15b80328e4cea73823c94565656c4d77 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 01-11-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DOE78_00245 15b80328e4cea73823c94565656c4d77 255 Pfam PF01026 TatD related DNase 3 252 1.1E-89 T 01-11-2018 IPR001130 TatD family GO:0016788 DOE78_00245 15b80328e4cea73823c94565656c4d77 255 SUPERFAMILY SSF51556 1 254 3.87E-97 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_11150 39bb77f1cf7b6bc525ccdb3c1eeb136c 401 Gene3D G3DSA:1.10.287.470 103 180 4.8E-21 T 01-11-2018 DOE78_11150 39bb77f1cf7b6bc525ccdb3c1eeb136c 401 Gene3D G3DSA:2.40.50.100 78 225 4.8E-21 T 01-11-2018 DOE78_11150 39bb77f1cf7b6bc525ccdb3c1eeb136c 401 Gene3D G3DSA:2.40.30.170 226 275 4.8E-21 T 01-11-2018 DOE78_11150 39bb77f1cf7b6bc525ccdb3c1eeb136c 401 Gene3D G3DSA:2.40.420.20 312 383 5.0E-14 T 01-11-2018 DOE78_11150 39bb77f1cf7b6bc525ccdb3c1eeb136c 401 Pfam PF13437 HlyD family secretion protein 193 309 6.6E-6 T 01-11-2018 DOE78_19110 5173f91a6c8a171ca7f705d4e540535d 137 Pfam PF09643 YopX protein 5 136 1.8E-24 T 01-11-2018 IPR019096 YopX protein DOE78_19110 5173f91a6c8a171ca7f705d4e540535d 137 SUPERFAMILY SSF159006 2 136 1.44E-30 T 01-11-2018 DOE78_19110 5173f91a6c8a171ca7f705d4e540535d 137 Gene3D G3DSA:2.30.30.290 73 137 4.4E-18 T 01-11-2018 IPR023385 YopX-like, C-terminal DOE78_16270 1617bd9e9841abd410a362844738e948 82 SUPERFAMILY SSF54862 4 72 2.25E-13 T 01-11-2018 DOE78_16270 1617bd9e9841abd410a362844738e948 82 Gene3D G3DSA:3.30.70.20 2 82 3.7E-34 T 01-11-2018 DOE78_16270 1617bd9e9841abd410a362844738e948 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 6.1E-8 T 01-11-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 DOE78_16270 1617bd9e9841abd410a362844738e948 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 6.1E-8 T 01-11-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 DOE78_16270 1617bd9e9841abd410a362844738e948 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 6.1E-8 T 01-11-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 DOE78_16270 1617bd9e9841abd410a362844738e948 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 4.2E-21 T 01-11-2018 DOE78_14305 0ac955ffc31e2d4d2ae88dc5f8d8e2eb 161 Pfam PF07552 Spore Coat Protein X and V domain 40 96 9.7E-19 T 01-11-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 DOE78_14305 0ac955ffc31e2d4d2ae88dc5f8d8e2eb 161 Pfam PF07552 Spore Coat Protein X and V domain 105 160 8.5E-21 T 01-11-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 2.4E-88 T 01-11-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 PRINTS PR00046 Major sigma-70 factor signature 238 249 3.3E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 PRINTS PR00046 Major sigma-70 factor signature 206 218 3.3E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 PRINTS PR00046 Major sigma-70 factor signature 58 71 3.3E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 PRINTS PR00046 Major sigma-70 factor signature 223 238 3.3E-11 T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 SUPERFAMILY SSF88659 107 183 7.41E-14 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 SUPERFAMILY SSF88946 12 103 2.62E-27 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 58 71 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 Pfam PF04545 Sigma-70, region 4 202 250 1.3E-16 T 01-11-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 1 254 1.2E-127 T 01-11-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 Gene3D G3DSA:1.10.10.10 187 257 1.1E-11 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 Pfam PF04539 Sigma-70 region 3 113 182 5.4E-16 T 01-11-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 SUPERFAMILY SSF88659 175 255 1.57E-16 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 01-11-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 252 2.2E-35 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 Pfam PF04542 Sigma-70 region 2 34 103 9.0E-15 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 Gene3D G3DSA:1.10.10.10 104 157 2.2E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_01375 efb7015cfa2fd0b9b9beb1f43a67f87c 264 Gene3D G3DSA:1.20.120.1810 1 102 4.9E-18 T 01-11-2018 DOE78_04395 4c64e212c0bf84a46610a0c316ffecea 315 PIRSF PIRSF025414 1 315 9.1E-147 T 01-11-2018 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 DOE78_04395 4c64e212c0bf84a46610a0c316ffecea 315 Gene3D G3DSA:2.115.10.20 3 315 1.6E-96 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_04395 4c64e212c0bf84a46610a0c316ffecea 315 Pfam PF04616 Glycosyl hydrolases family 43 8 309 2.5E-73 T 01-11-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DOE78_04395 4c64e212c0bf84a46610a0c316ffecea 315 SUPERFAMILY SSF75005 12 314 3.59E-71 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_09265 7bef380aa49d4d23b62d7cf603638612 429 Gene3D G3DSA:3.40.190.10 52 382 3.9E-101 T 01-11-2018 DOE78_09265 7bef380aa49d4d23b62d7cf603638612 429 Pfam PF01547 Bacterial extracellular solute-binding protein 48 340 3.3E-47 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_09265 7bef380aa49d4d23b62d7cf603638612 429 SUPERFAMILY SSF53850 18 424 5.93E-90 T 01-11-2018 DOE78_09265 7bef380aa49d4d23b62d7cf603638612 429 Gene3D G3DSA:3.40.190.10 151 412 3.9E-101 T 01-11-2018 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 Pfam PF07690 Major Facilitator Superfamily 12 232 1.5E-39 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 PRINTS PR01035 Tetracycline resistance protein signature 247 267 8.9E-23 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 PRINTS PR01035 Tetracycline resistance protein signature 161 181 8.9E-23 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 PRINTS PR01035 Tetracycline resistance protein signature 133 155 8.9E-23 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 PRINTS PR01035 Tetracycline resistance protein signature 75 99 8.9E-23 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 PRINTS PR01035 Tetracycline resistance protein signature 18 34 8.9E-23 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 PRINTS PR01035 Tetracycline resistance protein signature 275 296 8.9E-23 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 PRINTS PR01035 Tetracycline resistance protein signature 335 358 8.9E-23 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 Gene3D G3DSA:1.20.1250.20 1 387 6.0E-70 T 01-11-2018 DOE78_21475 569ecd7fa352b87964c0dbf139559692 399 SUPERFAMILY SSF103473 6 390 8.5E-70 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_08820 06f03a6a249fc2be1a6fd2dac0409052 418 Gene3D G3DSA:3.40.190.10 22 415 3.8E-55 T 01-11-2018 DOE78_08820 06f03a6a249fc2be1a6fd2dac0409052 418 SUPERFAMILY SSF53850 20 417 3.73E-59 T 01-11-2018 DOE78_08820 06f03a6a249fc2be1a6fd2dac0409052 418 Pfam PF01547 Bacterial extracellular solute-binding protein 50 333 9.6E-29 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_16650 bdf05bd4c72d2195ab343f50ce5e20ca 119 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 116 17.551 T 01-11-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 DOE78_16650 bdf05bd4c72d2195ab343f50ce5e20ca 119 PIRSF PIRSF004761 1 118 3.4E-24 T 01-11-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 DOE78_16650 bdf05bd4c72d2195ab343f50ce5e20ca 119 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 114 1.5E-23 T 01-11-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 DOE78_16650 bdf05bd4c72d2195ab343f50ce5e20ca 119 Gene3D G3DSA:3.30.2320.80 1 116 6.4E-26 T 01-11-2018 DOE78_17570 8311b00869c139ac471a0818f8667dfc 188 Pfam PF01966 HD domain 18 130 2.1E-16 T 01-11-2018 IPR006674 HD domain DOE78_17570 8311b00869c139ac471a0818f8667dfc 188 SUPERFAMILY SSF109604 5 184 5.5E-36 T 01-11-2018 DOE78_17570 8311b00869c139ac471a0818f8667dfc 188 TIGRFAM TIGR00277 HDIG: HDIG domain 18 93 4.9E-8 T 01-11-2018 IPR006675 HDIG domain DOE78_17570 8311b00869c139ac471a0818f8667dfc 188 SMART SM00471 14 141 3.0E-11 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_17570 8311b00869c139ac471a0818f8667dfc 188 Gene3D G3DSA:1.10.3210.10 1 186 4.0E-60 T 01-11-2018 DOE78_17570 8311b00869c139ac471a0818f8667dfc 188 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 181 1.8E-67 T 01-11-2018 IPR005249 Conserved hypothetical protein CHP00488 DOE78_15570 c4ed7d653d3d54fe1842eb7520482b3b 144 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 9.0E-64 T 01-11-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DOE78_15570 c4ed7d653d3d54fe1842eb7520482b3b 144 Pfam PF06491 Disulphide isomerase 8 144 1.8E-60 T 01-11-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DOE78_15570 c4ed7d653d3d54fe1842eb7520482b3b 144 Gene3D G3DSA:3.40.30.10 25 144 4.9E-52 T 01-11-2018 DOE78_02185 c3d8c8df418bc1e1216597e61e920063 132 SUPERFAMILY SSF55136 31 132 6.1E-6 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_02185 c3d8c8df418bc1e1216597e61e920063 132 Gene3D G3DSA:3.20.80.10 2 132 7.3E-23 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_02185 c3d8c8df418bc1e1216597e61e920063 132 Pfam PF14526 Integron-associated effector binding protein 22 130 7.8E-10 T 01-11-2018 IPR029441 Integron-associated effector binding protein DOE78_00300 2c3e92abf42199ff9d931f178d1f6a68 96 SUPERFAMILY SSF160537 1 89 6.41E-34 T 01-11-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 DOE78_00300 2c3e92abf42199ff9d931f178d1f6a68 96 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 28.305 T 01-11-2018 IPR007170 Stage V sporulation protein G GO:0030435 DOE78_00300 2c3e92abf42199ff9d931f178d1f6a68 96 Pfam PF04026 SpoVG 1 81 2.6E-36 T 01-11-2018 IPR007170 Stage V sporulation protein G GO:0030435 DOE78_00300 2c3e92abf42199ff9d931f178d1f6a68 96 Gene3D G3DSA:3.30.1120.40 1 96 5.3E-39 T 01-11-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 DOE78_16540 c6cfea6b96d7749a47401efe82b98005 153 SUPERFAMILY SSF109854 5 143 7.02E-24 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_16540 c6cfea6b96d7749a47401efe82b98005 153 Pfam PF12867 DinB superfamily 18 143 3.3E-7 T 01-11-2018 IPR024775 DinB-like domain DOE78_16540 c6cfea6b96d7749a47401efe82b98005 153 Gene3D G3DSA:1.20.120.450 1 148 5.0E-30 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_05055 bd3a12da49c30d4be4473cdeb85fea10 465 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 442 3.3E-171 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DOE78_05055 bd3a12da49c30d4be4473cdeb85fea10 465 PIRSF PIRSF006446 1 464 6.8E-183 T 01-11-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DOE78_16925 9529ce4f4025b79679d0930ccd5e09c2 402 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 81 395 6.6E-107 T 01-11-2018 IPR014194 Sporulation stage III, protein AE DOE78_16925 9529ce4f4025b79679d0930ccd5e09c2 402 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 2 395 2.7E-144 T 01-11-2018 IPR014194 Sporulation stage III, protein AE DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 SUPERFAMILY SSF90123 7 320 2.22E-75 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 Gene3D G3DSA:1.20.1560.10 2 319 1.4E-80 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 Pfam PF00664 ABC transporter transmembrane region 19 291 4.2E-46 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 Gene3D G3DSA:3.40.50.300 327 580 4.4E-84 T 01-11-2018 DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 SUPERFAMILY SSF52540 327 572 6.44E-84 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 SMART SM00382 362 550 1.0E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 Pfam PF00005 ABC transporter 353 500 1.9E-34 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_08710 bcb04af8dbd9ba15843e3dee456ced3d 582 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_23310 269b5a913103225171ed8dc0f7ba27d6 261 SUPERFAMILY SSF52266 88 258 5.66E-14 T 01-11-2018 DOE78_23310 269b5a913103225171ed8dc0f7ba27d6 261 Gene3D G3DSA:3.40.50.1110 83 259 6.6E-13 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_20770 3bc2c58522990bef194e0b1299b64a58 448 Pfam PF00209 Sodium:neurotransmitter symporter family 150 445 2.5E-30 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_20770 3bc2c58522990bef194e0b1299b64a58 448 Pfam PF00209 Sodium:neurotransmitter symporter family 5 122 1.5E-29 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_20770 3bc2c58522990bef194e0b1299b64a58 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 5.7E-13 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_20770 3bc2c58522990bef194e0b1299b64a58 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 5.7E-13 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_20770 3bc2c58522990bef194e0b1299b64a58 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 5.7E-13 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_20770 3bc2c58522990bef194e0b1299b64a58 448 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_20770 3bc2c58522990bef194e0b1299b64a58 448 SUPERFAMILY SSF161070 5 445 6.28E-136 T 01-11-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DOE78_16440 7a988233ef17a742c5348a7e7243848e 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 75 116 - T 01-11-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 DOE78_16440 7a988233ef17a742c5348a7e7243848e 273 Pfam PF01048 Phosphorylase superfamily 22 268 3.5E-55 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DOE78_16440 7a988233ef17a742c5348a7e7243848e 273 PIRSF PIRSF000477 2 271 4.0E-118 T 01-11-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DOE78_16440 7a988233ef17a742c5348a7e7243848e 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 22 268 1.4E-111 T 01-11-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DOE78_16440 7a988233ef17a742c5348a7e7243848e 273 Gene3D G3DSA:3.40.50.1580 4 271 1.0E-116 T 01-11-2018 DOE78_16440 7a988233ef17a742c5348a7e7243848e 273 SUPERFAMILY SSF53167 6 271 1.57E-102 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DOE78_16440 7a988233ef17a742c5348a7e7243848e 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 22 268 1.7E-119 T 01-11-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DOE78_01260 03c73eb6d7b02708a3891fce00dcd65b 187 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 180 3.0E-60 T 01-11-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_01260 03c73eb6d7b02708a3891fce00dcd65b 187 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 178 4.5E-64 T 01-11-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_01260 03c73eb6d7b02708a3891fce00dcd65b 187 Gene3D G3DSA:1.20.1200.10 12 187 1.7E-64 T 01-11-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_01260 03c73eb6d7b02708a3891fce00dcd65b 187 Pfam PF01923 Cobalamin adenosyltransferase 3 167 7.3E-58 T 01-11-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_01260 03c73eb6d7b02708a3891fce00dcd65b 187 SUPERFAMILY SSF89028 1 179 2.55E-63 T 01-11-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_17005 601be261ad42e07407c778e87128502f 126 SUPERFAMILY SSF52821 9 121 2.36E-35 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_17005 601be261ad42e07407c778e87128502f 126 Pfam PF00581 Rhodanese-like domain 43 121 5.6E-21 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_17005 601be261ad42e07407c778e87128502f 126 Gene3D G3DSA:3.40.250.10 30 125 1.3E-31 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_17005 601be261ad42e07407c778e87128502f 126 SMART SM00450 30 125 4.6E-31 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_00015 65bee50f6dc0502132c07c1c6c986e14 70 Gene3D G3DSA:3.10.290.10 2 69 1.8E-23 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_00015 65bee50f6dc0502132c07c1c6c986e14 70 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 4 62 2.4E-30 T 01-11-2018 IPR014330 RNA-binding S4-related,YaaA DOE78_00015 65bee50f6dc0502132c07c1c6c986e14 70 Pfam PF13275 S4 domain 5 67 9.6E-28 T 01-11-2018 DOE78_00015 65bee50f6dc0502132c07c1c6c986e14 70 SUPERFAMILY SSF55174 3 68 1.37E-17 T 01-11-2018 DOE78_05250 e24b7145dc35934ec2c5cf1fa0d3df2c 183 Gene3D G3DSA:1.20.1200.10 13 183 5.3E-57 T 01-11-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_05250 e24b7145dc35934ec2c5cf1fa0d3df2c 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 173 4.0E-49 T 01-11-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_05250 e24b7145dc35934ec2c5cf1fa0d3df2c 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 178 5.5E-54 T 01-11-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_05250 e24b7145dc35934ec2c5cf1fa0d3df2c 183 Pfam PF01923 Cobalamin adenosyltransferase 3 168 2.4E-58 T 01-11-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_05250 e24b7145dc35934ec2c5cf1fa0d3df2c 183 SUPERFAMILY SSF89028 1 178 6.08E-58 T 01-11-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DOE78_14145 2eb396fa814263be3faaf6b479c860f7 589 Gene3D G3DSA:3.40.50.1820 326 581 1.1E-33 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_14145 2eb396fa814263be3faaf6b479c860f7 589 Pfam PF10503 Esterase PHB depolymerase 348 475 3.9E-10 T 01-11-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 DOE78_14145 2eb396fa814263be3faaf6b479c860f7 589 SUPERFAMILY SSF53474 339 561 5.97E-22 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_04150 d59c668eb65798de9eaff0ba55fecacc 295 SUPERFAMILY SSF82171 32 254 5.1E-7 T 01-11-2018 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 PRINTS PR00944 Copper ion binding protein signature 3 15 1.1E-11 T 01-11-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 PRINTS PR00944 Copper ion binding protein signature 15 28 1.1E-11 T 01-11-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 PRINTS PR00944 Copper ion binding protein signature 54 67 1.1E-11 T 01-11-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 PRINTS PR00944 Copper ion binding protein signature 28 41 1.1E-11 T 01-11-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 67 3.7E-29 T 01-11-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 SUPERFAMILY SSF55008 1 67 3.67E-22 T 01-11-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 Pfam PF00403 Heavy-metal-associated domain 5 66 4.0E-19 T 01-11-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 Gene3D G3DSA:3.30.70.100 1 68 1.7E-25 T 01-11-2018 DOE78_21385 3dc4a1d1f615616ea8b760cd086b14e4 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 01-11-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DOE78_16960 d673acde0039670a58a1ec2060e851df 353 SUPERFAMILY SSF53092 2 126 1.15E-28 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE78_16960 d673acde0039670a58a1ec2060e851df 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 185 198 2.6E-7 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_16960 d673acde0039670a58a1ec2060e851df 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 2.6E-7 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_16960 d673acde0039670a58a1ec2060e851df 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 2.6E-7 T 01-11-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DOE78_16960 d673acde0039670a58a1ec2060e851df 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 01-11-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DOE78_16960 d673acde0039670a58a1ec2060e851df 353 Pfam PF00557 Metallopeptidase family M24 136 337 2.4E-67 T 01-11-2018 IPR000994 Peptidase M24 DOE78_16960 d673acde0039670a58a1ec2060e851df 353 Gene3D G3DSA:3.40.350.10 1 125 5.5E-39 T 01-11-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DOE78_16960 d673acde0039670a58a1ec2060e851df 353 SUPERFAMILY SSF55920 84 346 4.32E-85 T 01-11-2018 IPR036005 Creatinase/aminopeptidase-like DOE78_16960 d673acde0039670a58a1ec2060e851df 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 3.2E-29 T 01-11-2018 IPR000587 Creatinase, N-terminal GO:0016787 DOE78_16960 d673acde0039670a58a1ec2060e851df 353 Gene3D G3DSA:3.90.230.10 126 353 1.6E-85 T 01-11-2018 DOE78_21430 abc3154cb5efe69e8fa75f10f7fa4fe6 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 266 3.0E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_21430 abc3154cb5efe69e8fa75f10f7fa4fe6 277 Gene3D G3DSA:1.10.3720.10 1 269 8.1E-60 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21430 abc3154cb5efe69e8fa75f10f7fa4fe6 277 SUPERFAMILY SSF161098 9 277 1.78E-66 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08775 f74260a9b7902b1b7d96b48b370876e9 364 Gene3D G3DSA:3.40.50.2000 156 340 1.8E-59 T 01-11-2018 DOE78_08775 f74260a9b7902b1b7d96b48b370876e9 364 Pfam PF00534 Glycosyl transferases group 1 168 333 5.3E-35 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_08775 f74260a9b7902b1b7d96b48b370876e9 364 SUPERFAMILY SSF53756 39 353 2.2E-61 T 01-11-2018 DOE78_08775 f74260a9b7902b1b7d96b48b370876e9 364 Gene3D G3DSA:3.40.50.2000 46 344 1.8E-59 T 01-11-2018 DOE78_08775 f74260a9b7902b1b7d96b48b370876e9 364 Pfam PF13439 Glycosyltransferase Family 4 42 159 2.4E-10 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_08785 b264d3573462c79c4dd6ba605a0a8626 198 Gene3D G3DSA:1.10.510.10 10 116 1.1E-7 T 01-11-2018 DOE78_08785 b264d3573462c79c4dd6ba605a0a8626 198 SUPERFAMILY SSF56112 28 125 2.6E-12 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_07340 abc2d6a491c2ee461d9936e1c29f9549 325 Gene3D G3DSA:3.40.50.920 193 325 1.1E-47 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_07340 abc2d6a491c2ee461d9936e1c29f9549 325 SUPERFAMILY SSF52518 2 204 1.71E-67 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_07340 abc2d6a491c2ee461d9936e1c29f9549 325 Pfam PF02780 Transketolase, C-terminal domain 194 311 1.5E-39 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_07340 abc2d6a491c2ee461d9936e1c29f9549 325 Gene3D G3DSA:3.40.50.970 1 192 7.3E-82 T 01-11-2018 DOE78_07340 abc2d6a491c2ee461d9936e1c29f9549 325 SUPERFAMILY SSF52922 188 324 2.88E-41 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_07340 abc2d6a491c2ee461d9936e1c29f9549 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 5.3E-40 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_07340 abc2d6a491c2ee461d9936e1c29f9549 325 SMART SM00861 4 179 2.2E-65 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_16060 879f2f97518cf3d85021f961b483c555 120 PIRSF PIRSF005965 1 120 1.9E-48 T 01-11-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_16060 879f2f97518cf3d85021f961b483c555 120 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 2 118 5.3E-46 T 01-11-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_16060 879f2f97518cf3d85021f961b483c555 120 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 8 119 7.0E-34 T 01-11-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_16060 879f2f97518cf3d85021f961b483c555 120 Pfam PF07736 Chorismate mutase type I 2 118 3.3E-46 T 01-11-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DOE78_16060 879f2f97518cf3d85021f961b483c555 120 Gene3D G3DSA:3.30.1330.40 1 120 9.1E-49 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DOE78_16060 879f2f97518cf3d85021f961b483c555 120 SUPERFAMILY SSF55298 1 118 2.9E-45 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DOE78_23800 9440259147e971000853c58a80da7e78 206 SUPERFAMILY SSF52540 8 142 2.2E-42 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23800 9440259147e971000853c58a80da7e78 206 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 37.438 T 01-11-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DOE78_23800 9440259147e971000853c58a80da7e78 206 Gene3D G3DSA:3.40.50.300 1 141 7.0E-57 T 01-11-2018 DOE78_23800 9440259147e971000853c58a80da7e78 206 SUPERFAMILY SSF57716 142 193 2.04E-16 T 01-11-2018 DOE78_23800 9440259147e971000853c58a80da7e78 206 PIRSF PIRSF035805 5 200 4.2E-64 T 01-11-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DOE78_23800 9440259147e971000853c58a80da7e78 206 Gene3D G3DSA:3.30.60.20 142 205 3.1E-27 T 01-11-2018 DOE78_23800 9440259147e971000853c58a80da7e78 206 Pfam PF00265 Thymidine kinase 8 187 9.4E-57 T 01-11-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DOE78_23800 9440259147e971000853c58a80da7e78 206 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 01-11-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DOE78_17410 5d2fdca33db5e6c0bc8a612758a804a5 726 SMART SM00471 509 664 3.0E-11 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_17410 5d2fdca33db5e6c0bc8a612758a804a5 726 Pfam PF07697 7TM-HD extracellular 50 282 8.9E-33 T 01-11-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain DOE78_17410 5d2fdca33db5e6c0bc8a612758a804a5 726 SUPERFAMILY SSF109604 512 658 9.42E-15 T 01-11-2018 DOE78_17410 5d2fdca33db5e6c0bc8a612758a804a5 726 TIGRFAM TIGR00277 HDIG: HDIG domain 510 608 2.8E-29 T 01-11-2018 IPR006675 HDIG domain DOE78_17410 5d2fdca33db5e6c0bc8a612758a804a5 726 Gene3D G3DSA:1.10.3210.10 486 681 6.1E-25 T 01-11-2018 DOE78_17410 5d2fdca33db5e6c0bc8a612758a804a5 726 Pfam PF01966 HD domain 513 654 8.1E-19 T 01-11-2018 IPR006674 HD domain DOE78_17410 5d2fdca33db5e6c0bc8a612758a804a5 726 Pfam PF07698 7TM receptor with intracellular HD hydrolase 289 488 3.9E-44 T 01-11-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 01-11-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 01-11-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 Pfam PF02780 Transketolase, C-terminal domain 494 614 7.1E-34 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 SMART SM00861 317 482 6.4E-64 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 Pfam PF02779 Transketolase, pyrimidine binding domain 317 478 8.5E-39 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 SUPERFAMILY SSF52518 315 504 4.95E-55 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 625 44.372 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 Gene3D G3DSA:3.40.50.920 494 629 6.6E-39 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 2.1E-117 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 Gene3D G3DSA:3.40.50.970 316 490 7.8E-65 T 01-11-2018 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 SUPERFAMILY SSF52922 490 623 2.49E-33 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 620 3.9E-289 T 01-11-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DOE78_16840 6eada7305b19d7d83bcdcec689c42e22 634 SUPERFAMILY SSF52518 7 379 6.86E-73 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_23415 47411c5476a8ebfae6f13e021fcb49f9 447 Pfam PF02378 Phosphotransferase system, EIIC 29 358 2.9E-68 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_23415 47411c5476a8ebfae6f13e021fcb49f9 447 PIRSF PIRSF006351 1 441 1.2E-144 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_23415 47411c5476a8ebfae6f13e021fcb49f9 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 432 1.6E-147 T 01-11-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DOE78_23415 47411c5476a8ebfae6f13e021fcb49f9 447 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 432 1.6E-147 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_20535 9ae763070ac9d2cb09c74e8b6d3bf492 209 Gene3D G3DSA:3.40.50.300 1 209 1.2E-63 T 01-11-2018 DOE78_20535 9ae763070ac9d2cb09c74e8b6d3bf492 209 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 18 208 1.1E-52 T 01-11-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 DOE78_20535 9ae763070ac9d2cb09c74e8b6d3bf492 209 SUPERFAMILY SSF52540 39 208 4.89E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_20535 9ae763070ac9d2cb09c74e8b6d3bf492 209 Pfam PF13614 AAA domain 49 190 2.0E-10 T 01-11-2018 IPR025669 AAA domain DOE78_02155 3a7ab2aa62a395f4b0dede64ce49a3d7 327 SUPERFAMILY SSF51395 20 325 2.07E-58 T 01-11-2018 DOE78_02155 3a7ab2aa62a395f4b0dede64ce49a3d7 327 PIRSF PIRSF006621 8 327 1.4E-80 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DOE78_02155 3a7ab2aa62a395f4b0dede64ce49a3d7 327 Pfam PF01207 Dihydrouridine synthase (Dus) 22 324 3.5E-48 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DOE78_02155 3a7ab2aa62a395f4b0dede64ce49a3d7 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 106 124 - T 01-11-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DOE78_02155 3a7ab2aa62a395f4b0dede64ce49a3d7 327 Gene3D G3DSA:3.20.20.70 20 254 3.1E-60 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_15430 c938f615214871799d6922106d3ec186 425 Pfam PF07687 Peptidase dimerisation domain 202 314 1.2E-15 T 01-11-2018 IPR011650 Peptidase M20, dimerisation domain DOE78_15430 c938f615214871799d6922106d3ec186 425 Gene3D G3DSA:3.40.630.10 27 418 2.4E-138 T 01-11-2018 DOE78_15430 c938f615214871799d6922106d3ec186 425 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 21 409 2.9E-114 T 01-11-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase DOE78_15430 c938f615214871799d6922106d3ec186 425 Pfam PF01546 Peptidase family M20/M25/M40 97 415 4.1E-37 T 01-11-2018 IPR002933 Peptidase M20 GO:0016787 DOE78_15430 c938f615214871799d6922106d3ec186 425 SUPERFAMILY SSF55031 203 310 5.53E-16 T 01-11-2018 IPR036264 Bacterial exopeptidase dimerisation domain DOE78_15430 c938f615214871799d6922106d3ec186 425 SUPERFAMILY SSF53187 6 419 5.14E-61 T 01-11-2018 DOE78_15430 c938f615214871799d6922106d3ec186 425 Gene3D G3DSA:3.30.70.360 204 330 2.4E-138 T 01-11-2018 DOE78_03600 d92213e91da76a68830623a3732d3f5c 447 Pfam PF05048 Periplasmic copper-binding protein (NosD) 155 305 2.5E-7 T 01-11-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DOE78_03600 d92213e91da76a68830623a3732d3f5c 447 SUPERFAMILY SSF51126 4 374 6.29E-22 T 01-11-2018 IPR011050 Pectin lyase fold/virulence factor DOE78_03600 d92213e91da76a68830623a3732d3f5c 447 Gene3D G3DSA:2.160.20.10 1 403 4.2E-165 T 01-11-2018 IPR012334 Pectin lyase fold DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 Gene3D G3DSA:3.40.50.1100 58 388 8.8E-194 T 01-11-2018 DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 SUPERFAMILY SSF53686 7 391 3.8E-151 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 382 1.8E-48 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 01-11-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 PIRSF PIRSF001413 2 399 1.5E-171 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 395 53.283 T 01-11-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 Gene3D G3DSA:3.40.50.1100 14 210 8.8E-194 T 01-11-2018 DOE78_15045 e25d5338d2627b32802078d94e6ccf8c 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 394 2.9E-197 T 01-11-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_11495 e1fd9d09548773f74c376f5d10e2c0e4 463 TIGRFAM TIGR03236 dnd_assoc_1: DNA phosphorothioation-dependent restriction protein DptG 102 462 6.5E-98 T 01-11-2018 IPR017645 DNA phosphorothioation-dependent restriction protein DptG DOE78_02380 464e407b10744b2a10a203ce94320342 517 PIRSF PIRSF005690 27 516 8.2E-165 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_02380 464e407b10744b2a10a203ce94320342 517 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 42 503 1.9E-175 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_17595 48047dfbb21b86a33a255e43f642a805 171 Pfam PF13242 HAD-hyrolase-like 90 136 2.2E-11 T 01-11-2018 DOE78_17595 48047dfbb21b86a33a255e43f642a805 171 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 129 2.4E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_17595 48047dfbb21b86a33a255e43f642a805 171 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 41 136 1.0E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_17595 48047dfbb21b86a33a255e43f642a805 171 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 4 165 1.2E-57 T 01-11-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like DOE78_17595 48047dfbb21b86a33a255e43f642a805 171 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 28 138 4.7E-23 T 01-11-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DOE78_17595 48047dfbb21b86a33a255e43f642a805 171 SUPERFAMILY SSF56784 3 150 1.36E-25 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_17595 48047dfbb21b86a33a255e43f642a805 171 Gene3D G3DSA:3.40.50.1000 16 154 1.2E-22 T 01-11-2018 IPR023214 HAD superfamily DOE78_21135 4050fdff5b144a2db0b1dcef9c3a31b6 436 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 427 2.0E-77 T 01-11-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 DOE78_21135 4050fdff5b144a2db0b1dcef9c3a31b6 436 Pfam PF01458 Uncharacterized protein family (UPF0051) 185 410 8.9E-64 T 01-11-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DOE78_21135 4050fdff5b144a2db0b1dcef9c3a31b6 436 SUPERFAMILY SSF101960 12 435 2.35E-118 T 01-11-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DOE78_17490 049fe85ab35d801feaefbd54da897097 194 Pfam PF01025 GrpE 33 194 5.0E-54 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 Hamap MF_01151 Protein GrpE [grpE]. 2 194 20.491 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 SUPERFAMILY SSF51064 139 194 1.7E-18 T 01-11-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 SUPERFAMILY SSF58014 44 138 2.75E-25 T 01-11-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 PRINTS PR00773 GrpE protein signature 173 192 3.0E-28 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 PRINTS PR00773 GrpE protein signature 92 107 3.0E-28 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 PRINTS PR00773 GrpE protein signature 146 161 3.0E-28 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 PRINTS PR00773 GrpE protein signature 64 80 3.0E-28 T 01-11-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 Gene3D G3DSA:2.30.22.10 138 194 8.2E-24 T 01-11-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DOE78_17490 049fe85ab35d801feaefbd54da897097 194 Gene3D G3DSA:3.90.20.20 2 137 1.1E-24 T 01-11-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DOE78_09330 8c6a08d67a2056b3295659b9032d230f 935 SUPERFAMILY SSF53187 163 449 1.81E-28 T 01-11-2018 DOE78_09330 8c6a08d67a2056b3295659b9032d230f 935 Pfam PF00246 Zinc carboxypeptidase 178 349 2.7E-8 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_09330 8c6a08d67a2056b3295659b9032d230f 935 Gene3D G3DSA:3.40.630.10 162 431 4.8E-22 T 01-11-2018 DOE78_11120 8b19a99e2840118368d912665e49b82e 608 SUPERFAMILY SSF48230 145 323 1.83E-15 T 01-11-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 DOE78_11120 8b19a99e2840118368d912665e49b82e 608 Gene3D G3DSA:1.50.10.100 11 373 1.7E-43 T 01-11-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 DOE78_11120 8b19a99e2840118368d912665e49b82e 608 Gene3D G3DSA:2.70.98.70 375 525 7.3E-8 T 01-11-2018 DOE78_11120 8b19a99e2840118368d912665e49b82e 608 Pfam PF07940 Heparinase II/III-like protein 377 522 1.3E-5 T 01-11-2018 IPR012480 Heparinase II/III-like GO:0016829 DOE78_14290 1c7aac37623b8371328df0027499c0f5 82 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 12 78 5.0E-27 T 01-11-2018 IPR020256 Spore coat protein CotJA DOE78_14290 1c7aac37623b8371328df0027499c0f5 82 Pfam PF11007 Spore coat associated protein JA (CotJA) 35 70 1.7E-11 T 01-11-2018 IPR020256 Spore coat protein CotJA DOE78_14710 9a03ecfd0b82a3fa74afc508e8dc38fa 174 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 27 54 0.0015 T 01-11-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DOE78_14710 9a03ecfd0b82a3fa74afc508e8dc38fa 174 Gene3D G3DSA:2.102.10.10 62 173 9.8E-30 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_14710 9a03ecfd0b82a3fa74afc508e8dc38fa 174 Pfam PF00355 Rieske [2Fe-2S] domain 80 155 9.4E-13 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DOE78_14710 9a03ecfd0b82a3fa74afc508e8dc38fa 174 SUPERFAMILY SSF50022 26 166 9.56E-29 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_10145 e42696d7c2c9ac8752bf671a2f6fee08 201 SUPERFAMILY SSF53474 5 191 2.3E-23 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10145 e42696d7c2c9ac8752bf671a2f6fee08 201 Gene3D G3DSA:3.40.50.1820 2 195 5.0E-30 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10145 e42696d7c2c9ac8752bf671a2f6fee08 201 Pfam PF01738 Dienelactone hydrolase family 6 191 2.8E-27 T 01-11-2018 IPR002925 Dienelactone hydrolase GO:0016787 DOE78_10375 e77a70f9518dad7c362fd56a63b829de 202 Pfam PF01613 Flavin reductase like domain 23 166 3.3E-23 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 DOE78_10375 e77a70f9518dad7c362fd56a63b829de 202 SMART SM00903 20 175 1.2E-25 T 01-11-2018 IPR002563 Flavin reductase like domain GO:0010181 DOE78_10375 e77a70f9518dad7c362fd56a63b829de 202 Gene3D G3DSA:2.30.110.10 1 202 6.1E-66 T 01-11-2018 IPR012349 FMN-binding split barrel GO:0048037 DOE78_10375 e77a70f9518dad7c362fd56a63b829de 202 SUPERFAMILY SSF50475 3 197 1.28E-45 T 01-11-2018 DOE78_12220 66421fcf761b4373ebaf7afc9bd04754 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 288 3.1E-12 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12220 66421fcf761b4373ebaf7afc9bd04754 297 SUPERFAMILY SSF161098 10 296 1.53E-52 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12220 66421fcf761b4373ebaf7afc9bd04754 297 Gene3D G3DSA:1.10.3720.10 2 288 6.7E-66 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_16475 fdb14d9b79d92d7f8c6be5814baf9f67 387 SUPERFAMILY SSF47781 309 370 1.4E-7 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_16475 fdb14d9b79d92d7f8c6be5814baf9f67 387 Pfam PF13263 PHP-associated 195 241 1.2E-4 T 01-11-2018 DOE78_16475 fdb14d9b79d92d7f8c6be5814baf9f67 387 SUPERFAMILY SSF89550 2 245 7.65E-17 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DOE78_16475 fdb14d9b79d92d7f8c6be5814baf9f67 387 Gene3D G3DSA:1.10.150.20 312 367 4.0E-5 T 01-11-2018 DOE78_16475 fdb14d9b79d92d7f8c6be5814baf9f67 387 Gene3D G3DSA:3.20.20.140 1 246 1.3E-17 T 01-11-2018 DOE78_01655 e97258bb04672d0453231deedc7cb066 410 SUPERFAMILY SSF55785 290 389 4.76E-9 T 01-11-2018 IPR035965 PAS domain superfamily DOE78_01655 e97258bb04672d0453231deedc7cb066 410 Pfam PF13596 PAS domain 292 396 3.7E-28 T 01-11-2018 DOE78_01655 e97258bb04672d0453231deedc7cb066 410 Pfam PF01814 Hemerythrin HHE cation binding domain 102 233 7.1E-18 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DOE78_01655 e97258bb04672d0453231deedc7cb066 410 Gene3D G3DSA:1.20.120.520 97 303 3.1E-61 T 01-11-2018 DOE78_01655 e97258bb04672d0453231deedc7cb066 410 Pfam PF04282 Family of unknown function (DUF438) 22 89 8.9E-27 T 01-11-2018 IPR007380 Domain of unknown function DUF438 DOE78_01655 e97258bb04672d0453231deedc7cb066 410 Gene3D G3DSA:3.30.450.20 304 402 6.7E-6 T 01-11-2018 DOE78_22415 0af704669b571390b51a8d168bdf40f0 447 Pfam PF00083 Sugar (and other) transporter 55 418 1.9E-37 T 01-11-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DOE78_22415 0af704669b571390b51a8d168bdf40f0 447 ProSitePatterns PS00217 Sugar transport proteins signature 2. 351 376 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_22415 0af704669b571390b51a8d168bdf40f0 447 Gene3D G3DSA:1.20.1250.20 17 434 7.9E-83 T 01-11-2018 DOE78_22415 0af704669b571390b51a8d168bdf40f0 447 SUPERFAMILY SSF103473 13 429 7.06E-85 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.4E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.4E-8 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 SMART SM00866 89 228 4.6E-29 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 Gene3D G3DSA:3.40.1410.10 92 227 1.0E-33 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 SUPERFAMILY SSF46785 3 76 5.09E-18 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 Pfam PF07702 UTRA domain 90 228 3.2E-34 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 SUPERFAMILY SSF64288 73 233 9.74E-44 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 SMART SM00345 8 67 4.9E-13 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 5.2E-15 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 1.1E-93 T 01-11-2018 IPR012770 Trehalose operon transcriptional repressor DOE78_24395 63f7e60e62884bcadc3cff37eb4e7c60 238 Gene3D G3DSA:1.10.10.10 2 91 2.2E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13785 9fa27d963fa8a8c841dcaddf2097e738 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 170 2.6E-26 T 01-11-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DOE78_13785 9fa27d963fa8a8c841dcaddf2097e738 180 SUPERFAMILY SSF88659 113 171 7.29E-14 T 01-11-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DOE78_13785 9fa27d963fa8a8c841dcaddf2097e738 180 Gene3D G3DSA:1.10.1740.10 5 94 1.2E-22 T 01-11-2018 DOE78_13785 9fa27d963fa8a8c841dcaddf2097e738 180 SUPERFAMILY SSF88946 11 92 1.91E-22 T 01-11-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_13785 9fa27d963fa8a8c841dcaddf2097e738 180 Pfam PF04542 Sigma-70 region 2 19 84 1.7E-16 T 01-11-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DOE78_13785 9fa27d963fa8a8c841dcaddf2097e738 180 Gene3D G3DSA:1.10.10.10 109 173 1.7E-15 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_13785 9fa27d963fa8a8c841dcaddf2097e738 180 Pfam PF08281 Sigma-70, region 4 115 166 2.1E-12 T 01-11-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DOE78_19910 6a130a483012ea21041687008e1186d9 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 233 3.9E-8 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_19910 6a130a483012ea21041687008e1186d9 336 Gene3D G3DSA:3.30.360.10 119 329 1.9E-94 T 01-11-2018 DOE78_19910 6a130a483012ea21041687008e1186d9 336 SUPERFAMILY SSF51735 2 190 4.92E-39 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_19910 6a130a483012ea21041687008e1186d9 336 Gene3D G3DSA:3.40.50.720 4 312 1.9E-94 T 01-11-2018 DOE78_19910 6a130a483012ea21041687008e1186d9 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 113 3.4E-16 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_15660 7406e5b4126882e0312293e752fc3763 334 SUPERFAMILY SSF55961 127 329 5.49E-24 T 01-11-2018 DOE78_15660 7406e5b4126882e0312293e752fc3763 334 SUPERFAMILY SSF50022 11 125 3.93E-35 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_15660 7406e5b4126882e0312293e752fc3763 334 Pfam PF00355 Rieske [2Fe-2S] domain 18 97 9.9E-20 T 01-11-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DOE78_15660 7406e5b4126882e0312293e752fc3763 334 Gene3D G3DSA:2.102.10.10 14 140 1.9E-36 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_15660 7406e5b4126882e0312293e752fc3763 334 Gene3D G3DSA:3.30.530.90 141 330 6.4E-11 T 01-11-2018 DOE78_11535 79d609ec71008f6bd40abbfd165340d2 418 Gene3D G3DSA:1.10.860.10 4 129 1.0E-15 T 01-11-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DOE78_11535 79d609ec71008f6bd40abbfd165340d2 418 Pfam PF03796 DnaB-like helicase C terminal domain 156 407 1.1E-76 T 01-11-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DOE78_11535 79d609ec71008f6bd40abbfd165340d2 418 Gene3D G3DSA:3.40.50.300 130 415 5.8E-87 T 01-11-2018 DOE78_11535 79d609ec71008f6bd40abbfd165340d2 418 SUPERFAMILY SSF52540 154 404 6.2E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11535 79d609ec71008f6bd40abbfd165340d2 418 SUPERFAMILY SSF48024 5 79 2.09E-6 T 01-11-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DOE78_11535 79d609ec71008f6bd40abbfd165340d2 418 Pfam PF00772 DnaB-like helicase N terminal domain 5 78 9.1E-6 T 01-11-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DOE78_15670 37cab9b0833768eab233f341876becb7 286 SUPERFAMILY SSF161098 75 260 7.33E-27 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_15670 37cab9b0833768eab233f341876becb7 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 277 1.3E-24 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_15670 37cab9b0833768eab233f341876becb7 286 Gene3D G3DSA:1.10.3720.10 71 276 8.2E-21 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_05970 05ddb380762cf6571f3c5138a65f0500 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 8.3E-23 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_05970 05ddb380762cf6571f3c5138a65f0500 100 SUPERFAMILY SSF52794 1 98 6.02E-35 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_05970 05ddb380762cf6571f3c5138a65f0500 100 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 2.1E-33 T 01-11-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 DOE78_05970 05ddb380762cf6571f3c5138a65f0500 100 Gene3D G3DSA:3.40.50.2300 1 100 4.1E-38 T 01-11-2018 DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 Gene3D G3DSA:1.10.10.10 2 64 8.7E-9 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 SUPERFAMILY SSF54631 71 205 1.14E-22 T 01-11-2018 DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 Pfam PF08279 HTH domain 10 62 9.4E-13 T 01-11-2018 IPR013196 Helix-turn-helix, type 11 DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 Pfam PF00571 CBS domain 82 134 2.5E-5 T 01-11-2018 IPR000644 CBS domain DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 Pfam PF00571 CBS domain 148 204 2.5E-5 T 01-11-2018 IPR000644 CBS domain DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 Gene3D G3DSA:3.10.580.10 65 211 2.0E-57 T 01-11-2018 DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 SMART SM00116 87 135 0.37 T 01-11-2018 IPR000644 CBS domain DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 SMART SM00116 154 205 0.072 T 01-11-2018 IPR000644 CBS domain DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 PIRSF PIRSF026546 5 211 8.0E-101 T 01-11-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS DOE78_17365 4511be868ae7c0b473fc5bb87ef6f880 211 SUPERFAMILY SSF46785 6 77 5.13E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20360 e9f138d377bd47f4413423cca4b50d42 225 SUPERFAMILY SSF52172 1 173 3.84E-43 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_20360 e9f138d377bd47f4413423cca4b50d42 225 SMART SM00862 144 221 1.5E-23 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_20360 e9f138d377bd47f4413423cca4b50d42 225 SMART SM00448 2 112 2.1E-41 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_20360 e9f138d377bd47f4413423cca4b50d42 225 Pfam PF00072 Response regulator receiver domain 4 112 3.1E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_20360 e9f138d377bd47f4413423cca4b50d42 225 Gene3D G3DSA:3.40.50.12740 2 133 5.5E-42 T 01-11-2018 DOE78_20360 e9f138d377bd47f4413423cca4b50d42 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.5E-23 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_20360 e9f138d377bd47f4413423cca4b50d42 225 Gene3D G3DSA:1.10.10.10 134 224 8.4E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_24380 facbc0d546fa7259ea64f4eb5bbeb605 302 SUPERFAMILY SSF55347 121 258 6.87E-40 T 01-11-2018 DOE78_24380 facbc0d546fa7259ea64f4eb5bbeb605 302 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 1.1E-18 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_24380 facbc0d546fa7259ea64f4eb5bbeb605 302 SUPERFAMILY SSF51735 1 157 6.09E-35 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_24380 facbc0d546fa7259ea64f4eb5bbeb605 302 Gene3D G3DSA:3.30.360.10 119 301 8.8E-60 T 01-11-2018 DOE78_24380 facbc0d546fa7259ea64f4eb5bbeb605 302 Gene3D G3DSA:3.40.50.720 1 118 7.1E-29 T 01-11-2018 DOE78_09190 47e30edc38221d3281118155913b4f52 351 SUPERFAMILY SSF53850 147 267 4.34E-5 T 01-11-2018 DOE78_09190 47e30edc38221d3281118155913b4f52 351 Gene3D G3DSA:3.40.190.170 39 351 1.2E-94 T 01-11-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DOE78_09190 47e30edc38221d3281118155913b4f52 351 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 326 3.0E-48 T 01-11-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DOE78_06735 babc0f2268af7e1efb78594e50a369a5 339 PIRSF PIRSF011570 1 339 3.6E-151 T 01-11-2018 IPR010894 Stage V sporulation AD DOE78_06735 babc0f2268af7e1efb78594e50a369a5 339 Gene3D G3DSA:3.40.47.40 1 339 3.2E-143 T 01-11-2018 IPR038369 Stage V sporulation AD superfamily DOE78_06735 babc0f2268af7e1efb78594e50a369a5 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 336 1.6E-144 T 01-11-2018 IPR010894 Stage V sporulation AD DOE78_06735 babc0f2268af7e1efb78594e50a369a5 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 336 8.3E-149 T 01-11-2018 IPR010894 Stage V sporulation AD DOE78_06735 babc0f2268af7e1efb78594e50a369a5 339 SUPERFAMILY SSF53901 54 313 1.48E-14 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_08205 878117b25ebeed62519d8f548a38af1a 127 TIGRFAM TIGR02530 flg_new: flagellar operon protein 31 126 5.2E-37 T 01-11-2018 IPR013367 Flagellar, putative DOE78_08205 878117b25ebeed62519d8f548a38af1a 127 Pfam PF12611 Putative flagellar 102 125 8.3E-9 T 01-11-2018 IPR013367 Flagellar, putative DOE78_23245 3cc93d83243e70f54e4297c44861692f 391 Gene3D G3DSA:3.40.50.2000 208 386 6.0E-39 T 01-11-2018 DOE78_23245 3cc93d83243e70f54e4297c44861692f 391 Gene3D G3DSA:3.40.50.2000 38 207 7.0E-26 T 01-11-2018 DOE78_23245 3cc93d83243e70f54e4297c44861692f 391 Pfam PF00534 Glycosyl transferases group 1 198 353 4.5E-34 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23245 3cc93d83243e70f54e4297c44861692f 391 Pfam PF13579 Glycosyl transferase 4-like domain 66 195 2.3E-9 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_23245 3cc93d83243e70f54e4297c44861692f 391 SUPERFAMILY SSF53756 60 387 2.51E-70 T 01-11-2018 DOE78_17085 f8d6c257496ea52055edc5c94a0def99 232 SMART SM00418 6 88 0.005 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_17085 f8d6c257496ea52055edc5c94a0def99 232 SUPERFAMILY SSF46785 1 203 1.6E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_17085 f8d6c257496ea52055edc5c94a0def99 232 Pfam PF12840 Helix-turn-helix domain 7 60 9.5E-8 T 01-11-2018 DOE78_17085 f8d6c257496ea52055edc5c94a0def99 232 Gene3D G3DSA:3.30.1380.20 82 230 5.1E-7 T 01-11-2018 DOE78_17085 f8d6c257496ea52055edc5c94a0def99 232 Gene3D G3DSA:1.10.10.10 1 81 3.8E-10 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17000 a1769371f56f04e2e748cb38c0aef96f 278 SUPERFAMILY SSF55681 5 278 1.74E-68 T 01-11-2018 DOE78_17000 a1769371f56f04e2e748cb38c0aef96f 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 67.745 T 01-11-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DOE78_17000 a1769371f56f04e2e748cb38c0aef96f 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 1.7E-28 T 01-11-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DOE78_17000 a1769371f56f04e2e748cb38c0aef96f 278 Gene3D G3DSA:3.30.930.10 7 278 1.0E-69 T 01-11-2018 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PIRSF PIRSF003161 3 338 2.6E-125 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 338 1.9E-153 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 Gene3D G3DSA:1.10.220.30 107 198 1.1E-34 T 01-11-2018 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 SUPERFAMILY SSF48029 10 103 1.03E-20 T 01-11-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DOE78_08170 95114451e86a263ee23e619832a2dd32 338 Pfam PF14842 FliG N-terminal domain 8 111 7.8E-36 T 01-11-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DOE78_08170 95114451e86a263ee23e619832a2dd32 338 Pfam PF01706 FliG C-terminal domain 222 327 1.0E-41 T 01-11-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal DOE78_08170 95114451e86a263ee23e619832a2dd32 338 Pfam PF14841 FliG middle domain 119 193 4.6E-32 T 01-11-2018 IPR032779 Flagellar motor switch protein FliG, middle domain DOE78_08170 95114451e86a263ee23e619832a2dd32 338 SUPERFAMILY SSF48029 118 328 2.62E-69 T 01-11-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DOE78_08170 95114451e86a263ee23e619832a2dd32 338 Gene3D G3DSA:1.10.220.30 199 338 2.5E-48 T 01-11-2018 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 Gene3D G3DSA:1.10.220.30 2 88 3.2E-20 T 01-11-2018 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 38 64 4.6E-76 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 9 25 4.6E-76 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 4.6E-76 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 4.6E-76 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 4.6E-76 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 4.6E-76 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08170 95114451e86a263ee23e619832a2dd32 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 4.6E-76 T 01-11-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DOE78_08745 430676b74effeec80436a2542995d342 268 SUPERFAMILY SSF52540 3 259 9.25E-9 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08745 430676b74effeec80436a2542995d342 268 Gene3D G3DSA:3.40.50.300 3 262 1.4E-7 T 01-11-2018 DOE78_10175 67b1757d9a7935a59096f510af2847de 85 Gene3D G3DSA:2.40.50.100 6 76 6.4E-9 T 01-11-2018 DOE78_10175 67b1757d9a7935a59096f510af2847de 85 SUPERFAMILY SSF51230 7 75 2.71E-6 T 01-11-2018 IPR011053 Single hybrid motif DOE78_12110 3f18fe718268c2454a461baaae75ddd9 275 Gene3D G3DSA:3.40.190.10 112 220 5.0E-60 T 01-11-2018 DOE78_12110 3f18fe718268c2454a461baaae75ddd9 275 Pfam PF03180 NLPA lipoprotein 43 269 2.1E-43 T 01-11-2018 IPR004872 Lipoprotein NlpA family DOE78_12110 3f18fe718268c2454a461baaae75ddd9 275 SUPERFAMILY SSF53850 48 269 1.27E-43 T 01-11-2018 DOE78_12110 3f18fe718268c2454a461baaae75ddd9 275 Gene3D G3DSA:3.40.190.10 48 265 5.0E-60 T 01-11-2018 DOE78_08270 8a0e83c91ef3339907ee40daaf6aa405 404 Gene3D G3DSA:1.20.120.1380 154 392 2.7E-85 T 01-11-2018 DOE78_08270 8a0e83c91ef3339907ee40daaf6aa405 404 SMART SM00962 211 402 1.9E-60 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08270 8a0e83c91ef3339907ee40daaf6aa405 404 Pfam PF00448 SRP54-type protein, GTPase domain 212 401 2.6E-45 T 01-11-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DOE78_08270 8a0e83c91ef3339907ee40daaf6aa405 404 SUPERFAMILY SSF52540 211 402 4.26E-34 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08270 8a0e83c91ef3339907ee40daaf6aa405 404 Gene3D G3DSA:3.40.50.300 206 390 2.7E-85 T 01-11-2018 DOE78_08270 8a0e83c91ef3339907ee40daaf6aa405 404 SMART SM00382 210 401 4.9E-4 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_08270 8a0e83c91ef3339907ee40daaf6aa405 404 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 298 2.8E-72 T 01-11-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 DOE78_05110 77e43ab45713e108a8fa1ab213eb979b 42 Pfam PF14152 YfhE-like protein 3 37 2.9E-20 T 01-11-2018 IPR025437 YfhE-like protein DOE78_09235 5954fa413814ad5ba84e32d6c40d4f63 262 SUPERFAMILY SSF56529 2 260 1.44E-68 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_09235 5954fa413814ad5ba84e32d6c40d4f63 262 Gene3D G3DSA:3.90.850.10 1 259 3.1E-78 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_09235 5954fa413814ad5ba84e32d6c40d4f63 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 260 7.2E-11 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DOE78_23535 22ac2d6c18594ebdd871b05948e6ff74 279 SUPERFAMILY SSF117143 116 236 3.53E-18 T 01-11-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DOE78_23535 22ac2d6c18594ebdd871b05948e6ff74 279 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 198 273 1.2E-21 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE78_23535 22ac2d6c18594ebdd871b05948e6ff74 279 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 158 1.1E-24 T 01-11-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DOE78_23535 22ac2d6c18594ebdd871b05948e6ff74 279 Pfam PF00460 Flagella basal body rod protein 5 35 3.7E-11 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DOE78_13880 4f3e006ddf0ced99e4a470efcea7c1e8 275 SUPERFAMILY SSF161098 7 275 1.09E-66 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_13880 4f3e006ddf0ced99e4a470efcea7c1e8 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 269 9.2E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_13880 4f3e006ddf0ced99e4a470efcea7c1e8 275 Gene3D G3DSA:1.10.3720.10 2 263 3.4E-56 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11930 98fa16e2f860be09c315a4547659a9c8 334 Gene3D G3DSA:1.20.1260.10 1 145 1.2E-5 T 01-11-2018 IPR012347 Ferritin-like DOE78_11930 98fa16e2f860be09c315a4547659a9c8 334 Gene3D G3DSA:1.20.1260.10 173 316 1.0E-6 T 01-11-2018 IPR012347 Ferritin-like DOE78_11930 98fa16e2f860be09c315a4547659a9c8 334 Pfam PF11553 Protein of unknown function (DUF3231) 168 328 2.0E-46 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_11930 98fa16e2f860be09c315a4547659a9c8 334 Pfam PF11553 Protein of unknown function (DUF3231) 2 156 1.7E-36 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_03370 6a25a4cb61c55b2357f132ed1fbd57d2 427 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_03370 6a25a4cb61c55b2357f132ed1fbd57d2 427 SUPERFAMILY SSF103473 8 415 4.45E-55 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_03370 6a25a4cb61c55b2357f132ed1fbd57d2 427 Pfam PF07690 Major Facilitator Superfamily 16 255 1.3E-35 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_03370 6a25a4cb61c55b2357f132ed1fbd57d2 427 Pfam PF07690 Major Facilitator Superfamily 270 418 2.4E-9 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_03370 6a25a4cb61c55b2357f132ed1fbd57d2 427 Gene3D G3DSA:1.20.1250.20 14 411 3.5E-50 T 01-11-2018 DOE78_11875 41926409cbb20360c828d28aaa3b41d6 301 SUPERFAMILY SSF161098 62 287 9.68E-63 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11875 41926409cbb20360c828d28aaa3b41d6 301 SUPERFAMILY SSF160964 21 65 1.18E-5 T 01-11-2018 DOE78_11875 41926409cbb20360c828d28aaa3b41d6 301 Gene3D G3DSA:1.10.3720.10 58 299 4.3E-70 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11875 41926409cbb20360c828d28aaa3b41d6 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 291 4.6E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12380 e3b0d383ddc4c1bdf26d1473b81c426f 519 PIRSF PIRSF005690 27 517 1.0E-182 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_12380 e3b0d383ddc4c1bdf26d1473b81c426f 519 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 41 502 5.0E-192 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_09635 b391633306ad9b1319ba6aeb64b6d99b 380 Gene3D G3DSA:1.20.1250.20 1 380 3.5E-87 T 01-11-2018 DOE78_09635 b391633306ad9b1319ba6aeb64b6d99b 380 ProSitePatterns PS00216 Sugar transport proteins signature 1. 250 265 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_09635 b391633306ad9b1319ba6aeb64b6d99b 380 Pfam PF07690 Major Facilitator Superfamily 2 241 1.7E-39 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_09635 b391633306ad9b1319ba6aeb64b6d99b 380 ProSitePatterns PS00217 Sugar transport proteins signature 2. 88 113 - T 01-11-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DOE78_09635 b391633306ad9b1319ba6aeb64b6d99b 380 SUPERFAMILY SSF103473 1 378 3.01E-82 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 SUPERFAMILY SSF55021 340 415 1.14E-10 T 01-11-2018 DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 Gene3D G3DSA:3.40.50.1100 24 325 4.7E-117 T 01-11-2018 DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 15 422 8.1E-192 T 01-11-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 420 9.3E-27 T 01-11-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 SUPERFAMILY SSF53686 13 365 3.01E-98 T 01-11-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 Gene3D G3DSA:3.40.50.1100 59 158 4.7E-117 T 01-11-2018 DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 Gene3D G3DSA:3.40.1020.10 326 422 6.7E-10 T 01-11-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 316 1.5E-75 T 01-11-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DOE78_15535 f6c378b99b821e80e346d091bdd1a3b6 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 01-11-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DOE78_11155 3a2106cf0a6e17ddf353344734784467 226 Pfam PF00005 ABC transporter 21 169 2.6E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_11155 3a2106cf0a6e17ddf353344734784467 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_11155 3a2106cf0a6e17ddf353344734784467 226 Gene3D G3DSA:3.40.50.300 1 225 5.4E-68 T 01-11-2018 DOE78_11155 3a2106cf0a6e17ddf353344734784467 226 SMART SM00382 30 217 5.1E-18 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_11155 3a2106cf0a6e17ddf353344734784467 226 SUPERFAMILY SSF52540 1 221 6.79E-74 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_12470 035f5a4b4b7a44e98cb2384563c87bbb 228 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 105 227 2.7E-60 T 01-11-2018 IPR014258 CAP domain, YkwD-like DOE78_12470 035f5a4b4b7a44e98cb2384563c87bbb 228 SUPERFAMILY SSF55797 104 225 5.23E-27 T 01-11-2018 IPR035940 CAP superfamily DOE78_12470 035f5a4b4b7a44e98cb2384563c87bbb 228 Gene3D G3DSA:3.40.33.10 4 226 1.7E-70 T 01-11-2018 IPR035940 CAP superfamily DOE78_12470 035f5a4b4b7a44e98cb2384563c87bbb 228 Pfam PF00188 Cysteine-rich secretory protein family 113 224 1.0E-22 T 01-11-2018 IPR014044 CAP domain DOE78_04660 dd2c5f2b2a3a42aac0de61b44f505e34 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.8E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_04660 dd2c5f2b2a3a42aac0de61b44f505e34 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 8.0E-31 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DOE78_04660 dd2c5f2b2a3a42aac0de61b44f505e34 219 Gene3D G3DSA:1.10.3720.10 1 217 5.9E-61 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04660 dd2c5f2b2a3a42aac0de61b44f505e34 219 SUPERFAMILY SSF161098 13 201 1.7E-46 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11460 1ea3d331123786946708b0f0712c6ab9 471 Pfam PF14281 PD-(D/E)XK nuclease superfamily 36 244 1.1E-21 T 01-11-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 DOE78_12830 1c825b6705fa22b5c5d75b0b98f17be5 373 Pfam PF11760 Cobalamin synthesis G N-terminal 71 149 1.9E-33 T 01-11-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 DOE78_12830 1c825b6705fa22b5c5d75b0b98f17be5 373 Pfam PF01890 Cobalamin synthesis G C-terminus 252 369 7.3E-34 T 01-11-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 DOE78_12830 1c825b6705fa22b5c5d75b0b98f17be5 373 Gene3D G3DSA:3.40.50.11220 12 144 3.8E-32 T 01-11-2018 DOE78_12830 1c825b6705fa22b5c5d75b0b98f17be5 373 Pfam PF11761 Cobalamin biosynthesis central region 155 249 7.5E-13 T 01-11-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 DOE78_12830 1c825b6705fa22b5c5d75b0b98f17be5 373 SUPERFAMILY SSF159672 17 259 3.4E-57 T 01-11-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 DOE78_12830 1c825b6705fa22b5c5d75b0b98f17be5 373 SUPERFAMILY SSF159664 245 371 1.28E-38 T 01-11-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 DOE78_12830 1c825b6705fa22b5c5d75b0b98f17be5 373 Gene3D G3DSA:3.30.420.180 242 372 2.1E-38 T 01-11-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 DOE78_22165 ea94553ee74baeb88efadf1dda29f55f 252 Pfam PF00977 Histidine biosynthesis protein 5 235 5.3E-90 T 01-11-2018 IPR006062 Histidine biosynthesis GO:0000105 DOE78_22165 ea94553ee74baeb88efadf1dda29f55f 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 49.805 T 01-11-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DOE78_22165 ea94553ee74baeb88efadf1dda29f55f 252 SUPERFAMILY SSF51366 2 252 1.88E-83 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_22165 ea94553ee74baeb88efadf1dda29f55f 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 252 1.7E-121 T 01-11-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DOE78_22165 ea94553ee74baeb88efadf1dda29f55f 252 Gene3D G3DSA:3.20.20.70 1 252 2.4E-109 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_03280 39da8d7fadedfe9cf6f3787dbd0e8dab 165 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 27 139 1.8E-56 T 01-11-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DOE78_03280 39da8d7fadedfe9cf6f3787dbd0e8dab 165 Pfam PF14489 QueF-like protein 62 140 7.5E-36 T 01-11-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DOE78_03280 39da8d7fadedfe9cf6f3787dbd0e8dab 165 SUPERFAMILY SSF55620 27 135 7.41E-29 T 01-11-2018 DOE78_03280 39da8d7fadedfe9cf6f3787dbd0e8dab 165 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 165 72.335 T 01-11-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DOE78_03280 39da8d7fadedfe9cf6f3787dbd0e8dab 165 Gene3D G3DSA:3.30.1130.10 21 165 1.8E-67 T 01-11-2018 DOE78_03280 39da8d7fadedfe9cf6f3787dbd0e8dab 165 PIRSF PIRSF027377 9 147 8.4E-63 T 01-11-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DOE78_24520 d24e343c9e5c5cc4d2d07465ce953cc0 180 SUPERFAMILY SSF56024 44 175 4.49E-27 T 01-11-2018 DOE78_24520 d24e343c9e5c5cc4d2d07465ce953cc0 180 Gene3D G3DSA:3.30.870.10 42 177 8.2E-35 T 01-11-2018 DOE78_24520 d24e343c9e5c5cc4d2d07465ce953cc0 180 Pfam PF13091 PLD-like domain 48 172 6.6E-26 T 01-11-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DOE78_13345 e058c9ea1d0559ee61fce7616d3be390 317 SUPERFAMILY SSF55347 132 277 1.18E-18 T 01-11-2018 DOE78_13345 e058c9ea1d0559ee61fce7616d3be390 317 Gene3D G3DSA:3.40.50.720 1 132 9.3E-37 T 01-11-2018 DOE78_13345 e058c9ea1d0559ee61fce7616d3be390 317 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 204 2.6E-5 T 01-11-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DOE78_13345 e058c9ea1d0559ee61fce7616d3be390 317 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 123 1.1E-25 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_13345 e058c9ea1d0559ee61fce7616d3be390 317 SUPERFAMILY SSF51735 3 155 4.13E-43 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_13345 e058c9ea1d0559ee61fce7616d3be390 317 Gene3D G3DSA:3.30.360.10 133 317 1.1E-24 T 01-11-2018 DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 SUPERFAMILY SSF49899 29 293 4.02E-75 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 SUPERFAMILY SSF49785 661 802 7.17E-32 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 SUPERFAMILY SSF49785 495 648 4.42E-32 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Gene3D G3DSA:2.60.120.260 660 801 8.4E-34 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Pfam PF02018 Carbohydrate binding domain 500 632 2.2E-17 T 01-11-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Pfam PF02018 Carbohydrate binding domain 377 467 5.2E-8 T 01-11-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Pfam PF02018 Carbohydrate binding domain 662 774 8.3E-12 T 01-11-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Gene3D G3DSA:2.60.120.200 26 300 1.3E-93 T 01-11-2018 DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Pfam PF00722 Glycosyl hydrolases family 16 77 288 3.9E-29 T 01-11-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Gene3D G3DSA:2.60.120.260 311 485 1.3E-33 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 Gene3D G3DSA:2.60.120.260 486 654 5.6E-36 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_22660 dd62d84e81187c7ab5031d4f5717052e 810 SUPERFAMILY SSF49785 316 483 4.62E-29 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_01235 c95d94bc143b16658b9006df5090c92c 325 Gene3D G3DSA:3.40.50.1980 66 187 2.2E-36 T 01-11-2018 DOE78_01235 c95d94bc143b16658b9006df5090c92c 325 Gene3D G3DSA:3.40.50.1980 188 321 3.0E-44 T 01-11-2018 DOE78_01235 c95d94bc143b16658b9006df5090c92c 325 SUPERFAMILY SSF53807 46 320 2.98E-68 T 01-11-2018 DOE78_01235 c95d94bc143b16658b9006df5090c92c 325 Pfam PF01497 Periplasmic binding protein 69 298 1.2E-40 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Pfam PF07949 YbbR-like protein 142 225 5.6E-11 T 01-11-2018 IPR012505 YbbR-like DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Pfam PF07949 YbbR-like protein 52 132 8.9E-11 T 01-11-2018 IPR012505 YbbR-like DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Pfam PF07949 YbbR-like protein 234 312 5.2E-11 T 01-11-2018 IPR012505 YbbR-like DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Pfam PF07949 YbbR-like protein 326 406 5.3E-5 T 01-11-2018 IPR012505 YbbR-like DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Gene3D G3DSA:2.170.120.30 315 411 6.0E-18 T 01-11-2018 DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Gene3D G3DSA:2.170.120.30 39 140 9.9E-27 T 01-11-2018 DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Gene3D G3DSA:2.170.120.40 231 314 4.9E-18 T 01-11-2018 DOE78_01020 9edfaa65d424f86b682c14eeffd9c836 411 Gene3D G3DSA:2.170.120.40 141 228 3.8E-7 T 01-11-2018 DOE78_05380 8bad6e004660df45bc7a641946361bc3 396 Pfam PF07690 Major Facilitator Superfamily 15 325 9.5E-41 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_05380 8bad6e004660df45bc7a641946361bc3 396 Gene3D G3DSA:1.20.1250.20 3 384 1.9E-48 T 01-11-2018 DOE78_05380 8bad6e004660df45bc7a641946361bc3 396 SUPERFAMILY SSF103473 4 385 6.54E-59 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_19825 26d750ce3a8722bf73106308f6ab4f1e 323 Gene3D G3DSA:3.20.20.150 1 316 2.6E-70 T 01-11-2018 DOE78_19825 26d750ce3a8722bf73106308f6ab4f1e 323 SUPERFAMILY SSF51658 1 305 1.93E-48 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_19825 26d750ce3a8722bf73106308f6ab4f1e 323 Pfam PF07582 AP endonuclease family 2 C terminus 270 323 1.6E-20 T 01-11-2018 IPR011418 AP endonuclease, family 2, C-terminal DOE78_19825 26d750ce3a8722bf73106308f6ab4f1e 323 Pfam PF01261 Xylose isomerase-like TIM barrel 20 235 4.3E-29 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_12800 e53bbd00fd0da03bed6f741c1ab63591 257 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 243 5.5E-75 T 01-11-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DOE78_12800 e53bbd00fd0da03bed6f741c1ab63591 257 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 236 1.1E-60 T 01-11-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DOE78_12005 68574407a27d80f833a327edf884e783 520 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 438 1.2E-77 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_12005 68574407a27d80f833a327edf884e783 520 PIRSF PIRSF002741 11 520 2.8E-86 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DOE78_12005 68574407a27d80f833a327edf884e783 520 Gene3D G3DSA:3.10.105.10 271 476 2.6E-153 T 01-11-2018 DOE78_12005 68574407a27d80f833a327edf884e783 520 Gene3D G3DSA:3.40.190.10 63 270 2.6E-153 T 01-11-2018 DOE78_12005 68574407a27d80f833a327edf884e783 520 SUPERFAMILY SSF53850 45 514 1.79E-104 T 01-11-2018 DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 SUPERFAMILY SSF55781 71 339 2.55E-70 T 01-11-2018 DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 34.039 T 01-11-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 Pfam PF01628 HrcA protein C terminal domain 104 322 9.5E-67 T 01-11-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 334 1.7E-111 T 01-11-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 Gene3D G3DSA:1.10.10.10 1 84 4.2E-33 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 Gene3D G3DSA:3.30.450.40 104 335 3.9E-63 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 PIRSF PIRSF005485 1 340 6.4E-126 T 01-11-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 Gene3D G3DSA:3.30.390.60 128 229 3.9E-63 T 01-11-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DOE78_17495 e39f164b8bfbe05fe54673da0114cf66 343 SUPERFAMILY SSF46785 1 85 2.57E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10560 f31f1a02ab8ca85d7643c60b7753030c 456 Pfam PF00171 Aldehyde dehydrogenase family 12 428 2.1E-95 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_10560 f31f1a02ab8ca85d7643c60b7753030c 456 Gene3D G3DSA:3.40.309.10 213 408 1.4E-177 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_10560 f31f1a02ab8ca85d7643c60b7753030c 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 237 248 - T 01-11-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DOE78_10560 f31f1a02ab8ca85d7643c60b7753030c 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 209 216 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_10560 f31f1a02ab8ca85d7643c60b7753030c 456 Gene3D G3DSA:3.40.605.10 13 428 1.4E-177 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_10560 f31f1a02ab8ca85d7643c60b7753030c 456 SUPERFAMILY SSF53720 10 442 6.54E-129 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_10560 f31f1a02ab8ca85d7643c60b7753030c 456 PIRSF PIRSF036492 1 456 5.3E-183 T 01-11-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DOE78_23060 cb832766349b428f5ad44eb9cdd8a455 237 Gene3D G3DSA:2.160.10.10 58 225 1.6E-42 T 01-11-2018 DOE78_23060 cb832766349b428f5ad44eb9cdd8a455 237 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 182 209 0.0043 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_23060 cb832766349b428f5ad44eb9cdd8a455 237 Gene3D G3DSA:2.160.10.10 1 57 3.2E-10 T 01-11-2018 DOE78_23060 cb832766349b428f5ad44eb9cdd8a455 237 SUPERFAMILY SSF51161 7 228 5.11E-42 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_23060 cb832766349b428f5ad44eb9cdd8a455 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 70 103 2.3E-5 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_23060 cb832766349b428f5ad44eb9cdd8a455 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 139 2.0E-4 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_23060 cb832766349b428f5ad44eb9cdd8a455 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 50 8.2E-8 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_00340 6e57c883a235ecd78bb9ecc0ee5395a9 535 PIRSF PIRSF038958 5 526 1.5E-80 T 01-11-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DOE78_00340 6e57c883a235ecd78bb9ecc0ee5395a9 535 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 363 509 4.0E-22 T 01-11-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DOE78_00340 6e57c883a235ecd78bb9ecc0ee5395a9 535 Pfam PF01943 Polysaccharide biosynthesis protein 10 310 3.1E-39 T 01-11-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DOE78_12350 1d4eae124059776e5f2070c3b9df645b 268 SUPERFAMILY SSF56317 1 262 4.06E-78 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_12350 1d4eae124059776e5f2070c3b9df645b 268 Gene3D G3DSA:3.60.110.10 1 260 8.4E-83 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_12350 1d4eae124059776e5f2070c3b9df645b 268 Pfam PF00795 Carbon-nitrogen hydrolase 2 242 9.9E-58 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DOE78_23545 8c1dae6b25b730732604f671dfa62f4f 90 Gene3D G3DSA:1.10.10.60 1 90 1.0E-43 T 01-11-2018 DOE78_23545 8c1dae6b25b730732604f671dfa62f4f 90 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 01-11-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DOE78_23545 8c1dae6b25b730732604f671dfa62f4f 90 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 81 4.6E-46 T 01-11-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID DOE78_23545 8c1dae6b25b730732604f671dfa62f4f 90 Pfam PF12116 Stage III sporulation protein D 2 82 2.0E-41 T 01-11-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID DOE78_08125 aec5af0bb064dae1d9628e64637c1dfd 435 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 37.512 T 01-11-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DOE78_08125 aec5af0bb064dae1d9628e64637c1dfd 435 SUPERFAMILY SSF51905 3 367 2.82E-31 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_08125 aec5af0bb064dae1d9628e64637c1dfd 435 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 5 434 4.4E-244 T 01-11-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DOE78_08125 aec5af0bb064dae1d9628e64637c1dfd 435 Gene3D G3DSA:3.50.50.60 290 435 1.8E-54 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_08125 aec5af0bb064dae1d9628e64637c1dfd 435 Gene3D G3DSA:3.50.50.60 4 178 2.6E-59 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_08125 aec5af0bb064dae1d9628e64637c1dfd 435 Pfam PF01134 Glucose inhibited division protein A 6 368 1.1E-117 T 01-11-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DOE78_08125 aec5af0bb064dae1d9628e64637c1dfd 435 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 01-11-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DOE78_18340 41cf03565da6f5c165048a2a1eec2861 88 Pfam PF06961 Protein of unknown function (DUF1294) 13 67 2.2E-23 T 01-11-2018 IPR010718 Protein of unknown function DUF1294 DOE78_05930 8d928ed1da123b1e050c68c24b678371 246 SUPERFAMILY SSF52540 3 229 2.66E-59 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05930 8d928ed1da123b1e050c68c24b678371 246 Pfam PF00005 ABC transporter 19 162 4.0E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_05930 8d928ed1da123b1e050c68c24b678371 246 SMART SM00382 28 213 1.8E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05930 8d928ed1da123b1e050c68c24b678371 246 Gene3D G3DSA:3.40.50.300 1 245 4.5E-64 T 01-11-2018 DOE78_14275 7fbaaff0f7bd6cd222894d4ead5ef29c 497 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 497 44.009 T 01-11-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14275 7fbaaff0f7bd6cd222894d4ead5ef29c 497 SUPERFAMILY SSF48557 3 495 4.32E-194 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 DOE78_14275 7fbaaff0f7bd6cd222894d4ead5ef29c 497 Gene3D G3DSA:1.20.200.10 197 496 6.6E-122 T 01-11-2018 DOE78_14275 7fbaaff0f7bd6cd222894d4ead5ef29c 497 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 01-11-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 DOE78_14275 7fbaaff0f7bd6cd222894d4ead5ef29c 497 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 3 494 1.8E-215 T 01-11-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DOE78_14275 7fbaaff0f7bd6cd222894d4ead5ef29c 497 Gene3D G3DSA:1.10.275.10 1 196 2.0E-69 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal DOE78_14275 7fbaaff0f7bd6cd222894d4ead5ef29c 497 Pfam PF00221 Aromatic amino acid lyase 10 468 3.6E-196 T 01-11-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DOE78_15475 72aad523cfa2a0a74c6b2f6724572bbe 175 SUPERFAMILY SSF55068 3 166 2.35E-71 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_15475 72aad523cfa2a0a74c6b2f6724572bbe 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 161 36.532 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_15475 72aad523cfa2a0a74c6b2f6724572bbe 175 Pfam PF01625 Peptide methionine sulfoxide reductase 5 154 1.8E-61 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_15475 72aad523cfa2a0a74c6b2f6724572bbe 175 Gene3D G3DSA:3.30.1060.10 1 163 6.4E-66 T 01-11-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_15475 72aad523cfa2a0a74c6b2f6724572bbe 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 154 1.1E-63 T 01-11-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DOE78_01960 a17e996e30818d2304af5d8c4b51316d 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 4.0E-22 T 01-11-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DOE78_01960 a17e996e30818d2304af5d8c4b51316d 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 8.5E-33 T 01-11-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DOE78_01960 a17e996e30818d2304af5d8c4b51316d 96 SUPERFAMILY SSF141000 3 94 4.32E-32 T 01-11-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 DOE78_01960 a17e996e30818d2304af5d8c4b51316d 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 25.563 T 01-11-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DOE78_01960 a17e996e30818d2304af5d8c4b51316d 96 Gene3D G3DSA:1.10.20.60 1 94 4.2E-32 T 01-11-2018 DOE78_07780 b5f2977458462c2edd81d11ab1b14789 276 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 267 3.1E-66 T 01-11-2018 IPR003730 Multi-copper polyphenol oxidoreductase DOE78_07780 b5f2977458462c2edd81d11ab1b14789 276 Gene3D G3DSA:3.60.140.10 3 274 1.8E-84 T 01-11-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DOE78_07780 b5f2977458462c2edd81d11ab1b14789 276 SUPERFAMILY SSF64438 11 271 6.04E-76 T 01-11-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DOE78_07780 b5f2977458462c2edd81d11ab1b14789 276 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 268 7.3E-54 T 01-11-2018 IPR003730 Multi-copper polyphenol oxidoreductase DOE78_05560 dd07fe4e32984dde99c9681e2fea07ee 123 Gene3D G3DSA:3.10.450.390 41 123 5.9E-8 T 01-11-2018 DOE78_05560 dd07fe4e32984dde99c9681e2fea07ee 123 Pfam PF13028 Protein of unknown function (DUF3889) 35 119 3.8E-14 T 01-11-2018 IPR024987 Protein of unknown function DUF3889 DOE78_09100 81696c4becc2cca1f51bd40a98f53aeb 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 297 3.8E-12 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_09100 81696c4becc2cca1f51bd40a98f53aeb 304 SUPERFAMILY SSF161098 17 304 1.31E-62 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09100 81696c4becc2cca1f51bd40a98f53aeb 304 Gene3D G3DSA:1.10.3720.10 9 295 6.9E-78 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 SMART SM00138 2 255 1.9E-100 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 SUPERFAMILY SSF47757 3 67 9.02E-13 T 01-11-2018 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 Pfam PF01739 CheR methyltransferase, SAM binding domain 68 240 2.9E-58 T 01-11-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 Gene3D G3DSA:3.40.50.150 67 257 2.4E-64 T 01-11-2018 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 SUPERFAMILY SSF53335 68 251 3.13E-48 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 Pfam PF03705 CheR methyltransferase, all-alpha domain 3 55 6.9E-14 T 01-11-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 PRINTS PR00996 Glutamate methyltransferase family signature 130 146 1.5E-37 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 PRINTS PR00996 Glutamate methyltransferase family signature 61 73 1.5E-37 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 PRINTS PR00996 Glutamate methyltransferase family signature 98 118 1.5E-37 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 PRINTS PR00996 Glutamate methyltransferase family signature 24 37 1.5E-37 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 PRINTS PR00996 Glutamate methyltransferase family signature 215 238 1.5E-37 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DOE78_16075 20fa3cc75788941b326b33bf9c10fa1e 257 PRINTS PR00996 Glutamate methyltransferase family signature 196 210 1.5E-37 T 01-11-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 Gene3D G3DSA:1.10.150.20 482 637 1.0E-82 T 01-11-2018 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 Gene3D G3DSA:1.20.1060.10 324 432 5.2E-22 T 01-11-2018 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 SUPERFAMILY SSF56672 304 703 2.67E-105 T 01-11-2018 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 Pfam PF01612 3'-5' exonuclease 110 295 5.6E-14 T 01-11-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 PRINTS PR00868 DNA-polymerase family A (pol I) signature 473 496 3.8E-33 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 PRINTS PR00868 DNA-polymerase family A (pol I) signature 430 452 3.8E-33 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 PRINTS PR00868 DNA-polymerase family A (pol I) signature 630 646 3.8E-33 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 671 3.8E-33 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 PRINTS PR00868 DNA-polymerase family A (pol I) signature 575 586 3.8E-33 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 PRINTS PR00868 DNA-polymerase family A (pol I) signature 597 608 3.8E-33 T 01-11-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 ProSitePatterns PS00447 DNA polymerase family A signature. 538 557 - T 01-11-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 SMART SM00482 460 675 2.3E-65 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 SUPERFAMILY SSF53098 107 296 6.96E-23 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 Gene3D G3DSA:3.30.70.370 438 704 1.0E-82 T 01-11-2018 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 Gene3D G3DSA:3.30.420.10 107 320 3.1E-38 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_19040 0dbb1359b9ab67d52118648240c845cd 725 Pfam PF00476 DNA polymerase family A 332 704 2.0E-98 T 01-11-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DOE78_14555 9b19ca75589860233c13f874b56bae1d 274 SUPERFAMILY SSF52402 5 273 1.36E-81 T 01-11-2018 DOE78_14555 9b19ca75589860233c13f874b56bae1d 274 Pfam PF02540 NAD synthase 24 265 6.3E-72 T 01-11-2018 IPR022310 NAD/GMP synthase DOE78_14555 9b19ca75589860233c13f874b56bae1d 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 22 274 1.6E-77 T 01-11-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DOE78_14555 9b19ca75589860233c13f874b56bae1d 274 Gene3D G3DSA:3.40.50.620 3 274 3.9E-82 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_14555 9b19ca75589860233c13f874b56bae1d 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 19 268 48.741 T 01-11-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 DOE78_19155 dd90cb71b6c953d40578f5b84ee8e42b 301 Pfam PF08378 Nuclease-related domain 37 143 5.2E-13 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_13910 d041fc31838bb9f19b63185315e13402 268 Gene3D G3DSA:3.30.1240.10 84 190 3.3E-88 T 01-11-2018 DOE78_13910 d041fc31838bb9f19b63185315e13402 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 234 5.2E-30 T 01-11-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DOE78_13910 d041fc31838bb9f19b63185315e13402 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 261 1.1E-70 T 01-11-2018 IPR000150 Cof family GO:0016787 DOE78_13910 d041fc31838bb9f19b63185315e13402 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 01-11-2018 DOE78_13910 d041fc31838bb9f19b63185315e13402 268 SUPERFAMILY SSF56784 1 266 2.67E-76 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_13910 d041fc31838bb9f19b63185315e13402 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 261 8.5E-70 T 01-11-2018 DOE78_13910 d041fc31838bb9f19b63185315e13402 268 Gene3D G3DSA:3.40.50.1000 3 262 3.3E-88 T 01-11-2018 IPR023214 HAD superfamily DOE78_03585 0f359f2b750e836590078412c6aa31ab 444 Gene3D G3DSA:3.40.190.10 149 431 5.5E-79 T 01-11-2018 DOE78_03585 0f359f2b750e836590078412c6aa31ab 444 Gene3D G3DSA:3.40.190.10 54 392 5.5E-79 T 01-11-2018 DOE78_03585 0f359f2b750e836590078412c6aa31ab 444 Pfam PF01547 Bacterial extracellular solute-binding protein 57 353 7.9E-29 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_03585 0f359f2b750e836590078412c6aa31ab 444 SUPERFAMILY SSF53850 21 441 3.14E-70 T 01-11-2018 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 156 2.3E-6 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 Gene3D G3DSA:3.40.50.1000 3 196 5.3E-50 T 01-11-2018 IPR023214 HAD superfamily DOE78_12545 cad0d12b556a6e116192629abc513a64 221 Gene3D G3DSA:1.10.150.240 15 83 5.3E-50 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 183 1.4E-38 T 01-11-2018 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 4.9E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 4.9E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 4.9E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 4.9E-7 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 183 2.6E-15 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_12545 cad0d12b556a6e116192629abc513a64 221 SUPERFAMILY SSF56784 1 206 5.69E-46 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_02205 eae052f3e7799ebdfdeef553f0e22b80 121 SMART SM00422 3 72 2.4E-19 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02205 eae052f3e7799ebdfdeef553f0e22b80 121 Pfam PF13411 MerR HTH family regulatory protein 3 68 1.3E-17 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_02205 eae052f3e7799ebdfdeef553f0e22b80 121 Gene3D G3DSA:1.10.1660.10 1 117 1.8E-34 T 01-11-2018 DOE78_02205 eae052f3e7799ebdfdeef553f0e22b80 121 SUPERFAMILY SSF46955 3 116 5.49E-30 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_06390 09e4d01c8722139fadc8a80618080dfd 286 SUPERFAMILY SSF82549 1 283 1.54E-87 T 01-11-2018 DOE78_06390 09e4d01c8722139fadc8a80618080dfd 286 Gene3D G3DSA:3.30.1180.10 156 285 7.0E-48 T 01-11-2018 DOE78_06390 09e4d01c8722139fadc8a80618080dfd 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 282 1.5E-82 T 01-11-2018 IPR003797 DegV DOE78_06390 09e4d01c8722139fadc8a80618080dfd 286 Gene3D G3DSA:3.40.50.10170 1 151 4.6E-44 T 01-11-2018 DOE78_06390 09e4d01c8722139fadc8a80618080dfd 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 281 6.6E-91 T 01-11-2018 IPR003797 DegV DOE78_07455 5b042ecfe8fda7f9ed9e29bf59036879 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 91 1.7E-41 T 01-11-2018 IPR009983 Uncharacterised protein family UPF0358 DOE78_07455 5b042ecfe8fda7f9ed9e29bf59036879 93 Gene3D G3DSA:1.10.287.750 4 92 4.6E-37 T 01-11-2018 IPR036270 UPF0358 superfamily DOE78_07455 5b042ecfe8fda7f9ed9e29bf59036879 93 Hamap MF_01560 UPF0358 protein . 3 93 27.793 T 01-11-2018 IPR009983 Uncharacterised protein family UPF0358 DOE78_07455 5b042ecfe8fda7f9ed9e29bf59036879 93 SUPERFAMILY SSF140404 6 84 8.5E-37 T 01-11-2018 IPR036270 UPF0358 superfamily DOE78_19375 bf762bf167b9a0ad3383b426d8f2c69e 538 Pfam PF01943 Polysaccharide biosynthesis protein 5 318 9.1E-48 T 01-11-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DOE78_19375 bf762bf167b9a0ad3383b426d8f2c69e 538 PIRSF PIRSF038958 1 535 1.4E-119 T 01-11-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DOE78_19375 bf762bf167b9a0ad3383b426d8f2c69e 538 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 370 518 9.5E-27 T 01-11-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DOE78_09505 3a64c791a3734f9fb79cde71f158d275 196 SUPERFAMILY SSF53254 1 194 7.99E-41 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_09505 3a64c791a3734f9fb79cde71f158d275 196 PIRSF PIRSF000709 1 157 2.2E-9 T 01-11-2018 DOE78_09505 3a64c791a3734f9fb79cde71f158d275 196 SMART SM00855 2 151 1.2E-16 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_09505 3a64c791a3734f9fb79cde71f158d275 196 Gene3D G3DSA:3.40.50.1240 1 196 2.7E-40 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_09505 3a64c791a3734f9fb79cde71f158d275 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 188 3.3E-37 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_12740 a8f7e579ae0199907775848ba9e13751 147 Gene3D G3DSA:3.40.930.10 1 147 8.2E-45 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_12740 a8f7e579ae0199907775848ba9e13751 147 SUPERFAMILY SSF55804 3 143 8.72E-31 T 01-11-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DOE78_12740 a8f7e579ae0199907775848ba9e13751 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 142 2.6E-27 T 01-11-2018 IPR002178 PTS EIIA type-2 domain DOE78_03350 50ece1f9079a28d1bf6827da66f03337 229 Pfam PF04239 Protein of unknown function (DUF421) 87 203 4.2E-28 T 01-11-2018 IPR007353 Protein of unknown function DUF421 DOE78_03350 50ece1f9079a28d1bf6827da66f03337 229 Gene3D G3DSA:3.30.240.20 168 228 3.3E-14 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_03350 50ece1f9079a28d1bf6827da66f03337 229 Gene3D G3DSA:3.30.240.20 80 152 1.6E-20 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_12505 e27478ac0315e761a56e222dfe3ad1ec 208 Gene3D G3DSA:3.40.109.10 1 208 1.7E-60 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_12505 e27478ac0315e761a56e222dfe3ad1ec 208 SUPERFAMILY SSF55469 5 207 5.5E-59 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_12505 e27478ac0315e761a56e222dfe3ad1ec 208 Pfam PF00881 Nitroreductase family 12 188 1.1E-28 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DOE78_20470 2f98a6191d99d21f5c4855054de89129 115 Gene3D G3DSA:1.10.260.40 1 113 6.0E-28 T 01-11-2018 DOE78_20470 2f98a6191d99d21f5c4855054de89129 115 SUPERFAMILY SSF47413 2 64 3.75E-18 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_20470 2f98a6191d99d21f5c4855054de89129 115 SUPERFAMILY SSF47406 73 108 4.58E-6 T 01-11-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 DOE78_20470 2f98a6191d99d21f5c4855054de89129 115 Pfam PF01381 Helix-turn-helix 6 61 2.2E-16 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_20470 2f98a6191d99d21f5c4855054de89129 115 SMART SM00530 5 61 2.3E-16 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 Pfam PF00128 Alpha amylase, catalytic domain 187 279 9.6E-22 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 Pfam PF00128 Alpha amylase, catalytic domain 300 465 5.2E-15 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 Gene3D G3DSA:2.60.40.1180 510 584 2.5E-8 T 01-11-2018 IPR013780 Glycosyl hydrolase, all-beta DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 SUPERFAMILY SSF51011 507 583 1.75E-10 T 01-11-2018 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 Gene3D G3DSA:3.20.20.80 170 502 7.8E-99 T 01-11-2018 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 SUPERFAMILY SSF49452 44 153 9.16E-31 T 01-11-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 Pfam PF16657 Maltogenic Amylase, C-terminal domain 507 581 2.9E-6 T 01-11-2018 IPR032091 Maltogenic Amylase, C-terminal DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 Gene3D G3DSA:2.60.40.1110 39 155 2.7E-30 T 01-11-2018 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 SUPERFAMILY SSF51445 162 503 3.88E-84 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 Pfam PF03714 Bacterial pullanase-associated domain 49 151 3.3E-19 T 01-11-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 DOE78_02775 a9ec95eab5be576ff581573d88f7b0f1 585 SMART SM00642 148 494 2.0E-26 T 01-11-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DOE78_09195 eda9019e0241a7622683e07518a7499e 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 52 181 1.5E-26 T 01-11-2018 IPR007387 TRAP transporter, small membrane protein DctQ DOE78_16920 8baa7ae95a110cb834d991d0141e8d64 204 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 111 2.2E-34 T 01-11-2018 IPR014245 Sporulation stage III, protein AF DOE78_16920 8baa7ae95a110cb834d991d0141e8d64 204 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 197 5.1E-39 T 01-11-2018 IPR014245 Sporulation stage III, protein AF DOE78_13685 e02faccc696a23e260f5e4954cca19f1 206 Pfam PF13460 NAD(P)H-binding 7 193 8.6E-42 T 01-11-2018 IPR016040 NAD(P)-binding domain DOE78_13685 e02faccc696a23e260f5e4954cca19f1 206 Gene3D G3DSA:3.40.50.720 2 206 2.4E-45 T 01-11-2018 DOE78_13685 e02faccc696a23e260f5e4954cca19f1 206 SUPERFAMILY SSF51735 2 204 1.34E-32 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_20950 df7ec5a84ea593a3d0155e4130fedad4 158 Pfam PF02681 Divergent PAP2 family 6 149 8.9E-50 T 01-11-2018 IPR003832 Protein of unknown function DUF212 DOE78_13530 a327c6b2e68bc0a3b8aa7a09b87fe141 195 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 184 1.8E-53 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DOE78_13530 a327c6b2e68bc0a3b8aa7a09b87fe141 195 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 193 20.901 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DOE78_13530 a327c6b2e68bc0a3b8aa7a09b87fe141 195 SMART SM01207 8 185 2.3E-82 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DOE78_13530 a327c6b2e68bc0a3b8aa7a09b87fe141 195 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 194 1.3E-66 T 01-11-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 Gene3D G3DSA:3.20.20.80 1 478 4.4E-151 T 01-11-2018 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 01-11-2018 IPR018120 Glycoside hydrolase family 1, active site DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 SUPERFAMILY SSF51445 2 471 1.52E-163 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 7.3E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 7.3E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 7.3E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 7.3E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 7.3E-16 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 1.1E-137 T 01-11-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DOE78_22310 bb2027b2ddd0970875054a3e98ac29c5 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 01-11-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DOE78_12575 3c0c9f3c4198a7bff856daa590623ddf 286 SUPERFAMILY SSF81606 75 284 5.23E-7 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_12575 3c0c9f3c4198a7bff856daa590623ddf 286 Gene3D G3DSA:3.60.40.10 65 285 1.4E-43 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_12575 3c0c9f3c4198a7bff856daa590623ddf 286 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 95 283 1.9E-32 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_12575 3c0c9f3c4198a7bff856daa590623ddf 286 SMART SM00331 68 283 9.6E-31 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_08755 4e376bf41b67f79a403a80d0f1c42ee3 204 SUPERFAMILY SSF56112 27 160 3.74E-12 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_08755 4e376bf41b67f79a403a80d0f1c42ee3 204 Gene3D G3DSA:1.10.510.10 5 160 3.4E-8 T 01-11-2018 DOE78_14440 ec0756c2faa81b5dca6c33ded5a8e92d 344 Pfam PF01212 Beta-eliminating lyase 3 287 3.1E-96 T 01-11-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DOE78_14440 ec0756c2faa81b5dca6c33ded5a8e92d 344 Gene3D G3DSA:3.40.640.10 1 246 6.5E-93 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_14440 ec0756c2faa81b5dca6c33ded5a8e92d 344 SUPERFAMILY SSF53383 2 337 3.36E-119 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_14440 ec0756c2faa81b5dca6c33ded5a8e92d 344 PIRSF PIRSF017617 1 344 1.7E-130 T 01-11-2018 IPR023603 Threonine aldolase DOE78_14440 ec0756c2faa81b5dca6c33ded5a8e92d 344 Gene3D G3DSA:3.90.1150.10 247 340 1.0E-22 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_09955 98a1199877c7701d1ec060bba4e78b96 211 SUPERFAMILY SSF52218 1 210 7.74E-51 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_09955 98a1199877c7701d1ec060bba4e78b96 211 Pfam PF02525 Flavodoxin-like fold 2 205 4.1E-43 T 01-11-2018 IPR003680 Flavodoxin-like fold DOE78_09955 98a1199877c7701d1ec060bba4e78b96 211 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 27.36 T 01-11-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DOE78_09955 98a1199877c7701d1ec060bba4e78b96 211 Gene3D G3DSA:3.40.50.360 1 211 2.1E-61 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 SUPERFAMILY SSF55781 16 166 1.23E-5 T 01-11-2018 DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 SUPERFAMILY SSF46894 158 230 8.16E-17 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 Gene3D G3DSA:1.10.10.10 161 230 1.9E-18 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 184 1.1E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 200 1.1E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 212 1.1E-10 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 169 221 3.4E-17 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_09490 b4c0c4a8f119dffa1c0bb548726b7488 231 SMART SM00421 167 224 1.3E-17 T 01-11-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DOE78_20655 a34d77396133a2c2e8e41662008a1d17 403 Gene3D G3DSA:1.20.1250.20 208 391 3.8E-13 T 01-11-2018 DOE78_20655 a34d77396133a2c2e8e41662008a1d17 403 Gene3D G3DSA:1.20.1250.20 1 192 4.9E-14 T 01-11-2018 DOE78_20655 a34d77396133a2c2e8e41662008a1d17 403 SUPERFAMILY SSF103473 3 389 1.7E-39 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_20655 a34d77396133a2c2e8e41662008a1d17 403 Pfam PF07690 Major Facilitator Superfamily 13 345 2.1E-22 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_14675 5560cd6010e78bd9da2dbaeb40b47575 151 Gene3D G3DSA:3.30.450.40 11 145 2.3E-26 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_14675 5560cd6010e78bd9da2dbaeb40b47575 151 SUPERFAMILY SSF55781 10 141 7.85E-12 T 01-11-2018 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 Pfam PF03129 Anticodon binding domain 472 561 1.6E-19 T 01-11-2018 IPR004154 Anticodon-binding DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 PIRSF PIRSF001535 1 565 1.9E-264 T 01-11-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 Gene3D G3DSA:3.40.50.800 4 549 2.1E-255 T 01-11-2018 IPR036621 Anticodon-binding domain superfamily DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 Pfam PF04073 Aminoacyl-tRNA editing domain 257 372 3.4E-28 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 SUPERFAMILY SSF52954 459 564 9.32E-31 T 01-11-2018 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 Gene3D G3DSA:3.30.930.10 11 461 2.1E-255 T 01-11-2018 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.6E-17 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.6E-17 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.6E-17 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.6E-17 T 01-11-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 454 1.2E-57 T 01-11-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 SUPERFAMILY SSF55826 218 385 1.96E-29 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 Gene3D G3DSA:3.90.960.10 240 385 2.1E-255 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 560 2.2E-247 T 01-11-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 565 41.559 T 01-11-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DOE78_08360 4acee7c7aa9fffbdbd7932f30aa85857 565 SUPERFAMILY SSF55681 9 473 9.36E-104 T 01-11-2018 DOE78_05935 67b8ddee783d6dea3c96434b9ff74d92 402 PIRSF PIRSF037259 2 402 1.0E-121 T 01-11-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 DOE78_05935 67b8ddee783d6dea3c96434b9ff74d92 402 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 386 1.9E-126 T 01-11-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 446 7.1E-152 T 01-11-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 571 36.803 T 01-11-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 Gene3D G3DSA:3.40.50.1220 200 380 4.7E-55 T 01-11-2018 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 SUPERFAMILY SSF52518 14 179 8.83E-41 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 SUPERFAMILY SSF52518 379 572 4.67E-32 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 Pfam PF16582 Middle domain of thiamine pyrophosphate 222 404 2.6E-13 T 01-11-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 SUPERFAMILY SSF52467 167 366 8.18E-7 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 177 1.3E-43 T 01-11-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 Gene3D G3DSA:3.40.50.970 1 174 1.1E-72 T 01-11-2018 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 431 553 4.8E-10 T 01-11-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 Gene3D G3DSA:3.40.50.970 382 580 8.2E-66 T 01-11-2018 DOE78_19605 2cfd12ee0419abcabe5e10e78b4f3030 583 PIRSF PIRSF004983 1 578 2.5E-197 T 01-11-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DOE78_01480 31380718ce8afe23d2e54a74427ce8de 151 SUPERFAMILY SSF52540 20 138 1.76E-22 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01480 31380718ce8afe23d2e54a74427ce8de 151 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 128 1.2E-38 T 01-11-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DOE78_01480 31380718ce8afe23d2e54a74427ce8de 151 Gene3D G3DSA:3.40.50.300 2 149 3.5E-42 T 01-11-2018 DOE78_01480 31380718ce8afe23d2e54a74427ce8de 151 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 132 5.2E-43 T 01-11-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DOE78_19450 e407cf632f182ecdf11fd3c5e5b5cb72 267 Pfam PF12146 Serine aminopeptidase, S33 9 244 1.0E-59 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 DOE78_19450 e407cf632f182ecdf11fd3c5e5b5cb72 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 2.4E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_19450 e407cf632f182ecdf11fd3c5e5b5cb72 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 2.4E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_19450 e407cf632f182ecdf11fd3c5e5b5cb72 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 2.4E-8 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_19450 e407cf632f182ecdf11fd3c5e5b5cb72 267 SUPERFAMILY SSF53474 5 257 1.62E-40 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_19450 e407cf632f182ecdf11fd3c5e5b5cb72 267 Gene3D G3DSA:3.40.50.1820 1 261 8.1E-57 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_08115 776ac6eaf358207dc41dd50a43eca86b 290 Pfam PF02481 DNA recombination-mediator protein A 71 278 3.5E-80 T 01-11-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DOE78_08115 776ac6eaf358207dc41dd50a43eca86b 290 SUPERFAMILY SSF102405 80 287 5.68E-36 T 01-11-2018 DOE78_08115 776ac6eaf358207dc41dd50a43eca86b 290 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 70 287 1.2E-79 T 01-11-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DOE78_08115 776ac6eaf358207dc41dd50a43eca86b 290 Gene3D G3DSA:3.40.50.450 7 289 5.1E-97 T 01-11-2018 DOE78_15365 21aecb64d67177a2007cd89e83f9c7ca 271 SMART SM00220 29 258 3.9E-11 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DOE78_15365 21aecb64d67177a2007cd89e83f9c7ca 271 SUPERFAMILY SSF56112 25 244 1.13E-41 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_15365 21aecb64d67177a2007cd89e83f9c7ca 271 Gene3D G3DSA:1.10.510.10 110 250 1.7E-20 T 01-11-2018 DOE78_15365 21aecb64d67177a2007cd89e83f9c7ca 271 Pfam PF00069 Protein kinase domain 30 182 3.5E-24 T 01-11-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DOE78_15365 21aecb64d67177a2007cd89e83f9c7ca 271 Gene3D G3DSA:3.30.200.20 18 108 8.4E-12 T 01-11-2018 DOE78_05955 1aad411b15b73f975464699278847df6 351 SUPERFAMILY SSF51004 14 350 1.8E-49 T 01-11-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DOE78_05955 1aad411b15b73f975464699278847df6 351 Pfam PF10282 Lactonase, 7-bladed beta-propeller 10 348 2.6E-123 T 01-11-2018 IPR019405 Lactonase, 7-bladed beta propeller DOE78_05955 1aad411b15b73f975464699278847df6 351 Gene3D G3DSA:2.130.10.10 7 350 5.3E-123 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DOE78_15125 671e076d111fbf1ded2a7a227bc8f93e 165 Gene3D G3DSA:3.40.630.30 1 165 4.1E-50 T 01-11-2018 DOE78_15125 671e076d111fbf1ded2a7a227bc8f93e 165 Pfam PF13420 Acetyltransferase (GNAT) domain 4 155 1.6E-27 T 01-11-2018 DOE78_15125 671e076d111fbf1ded2a7a227bc8f93e 165 SUPERFAMILY SSF55729 1 162 3.09E-35 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PIRSF PIRSF006615 6 504 4.3E-195 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 231 247 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 151 171 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 295 311 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 268 287 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 248 267 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 405 426 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 336 355 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 382 399 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 450 468 2.1E-73 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 SUPERFAMILY SSF55486 9 498 4.27E-116 T 01-11-2018 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 6 498 1.2E-171 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_13150 e7e88d7c2076d0941c34b9a4c306a776 504 Gene3D G3DSA:1.10.1370.30 5 504 1.1E-211 T 01-11-2018 DOE78_17285 23af4ff06e8136c2797c1c3a0a28fa75 283 Gene3D G3DSA:1.10.3470.10 61 276 2.6E-10 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_17285 23af4ff06e8136c2797c1c3a0a28fa75 283 SUPERFAMILY SSF81345 4 269 1.15E-38 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_17285 23af4ff06e8136c2797c1c3a0a28fa75 283 Pfam PF00950 ABC 3 transport family 7 270 8.5E-68 T 01-11-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DOE78_04245 a19db97062b2d452f77dc708a00abc7e 448 Pfam PF00324 Amino acid permease 14 445 6.3E-106 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_04245 a19db97062b2d452f77dc708a00abc7e 448 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 01-11-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DOE78_04245 a19db97062b2d452f77dc708a00abc7e 448 PIRSF PIRSF006060 1 448 3.7E-65 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_04245 a19db97062b2d452f77dc708a00abc7e 448 Gene3D G3DSA:1.20.1740.10 5 448 3.9E-59 T 01-11-2018 DOE78_16345 5a55dfabbd1adbabc884f54e5f6cbbbe 195 Pfam PF07670 Nucleoside recognition 43 150 1.1E-11 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_04595 ccb5b92b9dab1d053da07b5c95acb365 151 Pfam PF00583 Acetyltransferase (GNAT) family 37 129 5.5E-14 T 01-11-2018 IPR000182 GNAT domain DOE78_04595 ccb5b92b9dab1d053da07b5c95acb365 151 SUPERFAMILY SSF55729 1 151 2.92E-26 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_04595 ccb5b92b9dab1d053da07b5c95acb365 151 Gene3D G3DSA:3.40.630.30 1 151 8.6E-43 T 01-11-2018 DOE78_07100 d19ea51c584c487030c489be6c33292b 331 SUPERFAMILY SSF56112 10 297 1.65E-48 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_07100 d19ea51c584c487030c489be6c33292b 331 Pfam PF01636 Phosphotransferase enzyme family 31 238 1.2E-25 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_07100 d19ea51c584c487030c489be6c33292b 331 Gene3D G3DSA:3.90.1200.10 117 313 1.9E-21 T 01-11-2018 DOE78_08950 5cb4a7a0c24f6a1577f7c04ad66b8c45 266 SUPERFAMILY SSF53474 36 264 1.27E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_08950 5cb4a7a0c24f6a1577f7c04ad66b8c45 266 Gene3D G3DSA:3.40.50.1820 21 266 4.6E-64 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_08950 5cb4a7a0c24f6a1577f7c04ad66b8c45 266 Pfam PF07859 alpha/beta hydrolase fold 47 170 3.0E-12 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DOE78_17100 659439080ac3c1150888e1a54e4a504e 210 Gene3D G3DSA:3.60.15.10 1 210 2.7E-65 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_17100 659439080ac3c1150888e1a54e4a504e 210 SUPERFAMILY SSF56281 1 208 2.75E-55 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_17100 659439080ac3c1150888e1a54e4a504e 210 SMART SM00849 12 191 1.7E-43 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_17100 659439080ac3c1150888e1a54e4a504e 210 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 3.3E-32 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_23220 686e1960ed7ab55c0d179a693a0e7dfb 72 SUPERFAMILY SSF159283 23 66 2.22E-5 T 01-11-2018 DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 SUPERFAMILY SSF53383 106 464 1.2E-87 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 7.2E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 Gene3D G3DSA:3.90.1150.10 106 463 4.8E-97 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 Gene3D G3DSA:3.40.640.10 140 360 4.8E-97 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 SMART SM00345 14 73 8.6E-14 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 Gene3D G3DSA:1.10.10.10 1 80 7.2E-16 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 Pfam PF00155 Aminotransferase class I and II 139 458 1.6E-32 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_16585 ad32b0fad7ae9b2ce899fb2d0900d126 467 SUPERFAMILY SSF46785 2 77 9.92E-17 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_14920 d601fd9f6882d970d03f04ec6f8a8b78 179 Pfam PF06338 ComK protein 5 154 2.3E-39 T 01-11-2018 IPR010461 Competence protein ComK GO:0030420 DOE78_12300 c7d866c5977ee10ba2d2b3ddb4ca3b0f 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 335 7.3E-41 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 Gene3D G3DSA:1.50.10.10 109 900 0.0 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 SUPERFAMILY SSF48208 431 849 4.25E-46 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 785 855 1.8E-18 T 01-11-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 Gene3D G3DSA:2.60.40.10 1 108 3.0E-33 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 432 778 2.1E-122 T 01-11-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 PIRSF PIRSF010631 1 893 0.0 T 01-11-2018 IPR016007 Alpha-L-rhamnosidase DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 327 427 9.3E-31 T 01-11-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain DOE78_02590 b01fd0df687f3ca7b031bbffcec72711 979 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 145 315 1.6E-61 T 01-11-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal DOE78_19890 c01678a3f8bc6f37292fa45b4c0ef467 399 Pfam PF00877 NlpC/P60 family 288 391 3.8E-24 T 01-11-2018 IPR000064 Endopeptidase, NLPC/P60 domain DOE78_19890 c01678a3f8bc6f37292fa45b4c0ef467 399 SUPERFAMILY SSF54001 264 392 2.6E-30 T 01-11-2018 IPR038765 Papain-like cysteine peptidase superfamily DOE78_19890 c01678a3f8bc6f37292fa45b4c0ef467 399 Gene3D G3DSA:3.90.1720.10 180 396 4.6E-39 T 01-11-2018 DOE78_19890 c01678a3f8bc6f37292fa45b4c0ef467 399 SUPERFAMILY SSF90257 29 109 4.18E-5 T 01-11-2018 DOE78_05405 e9b1442956ecb17edea0d7657324f40e 158 PIRSF PIRSF029256 2 158 2.1E-66 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DOE78_05405 e9b1442956ecb17edea0d7657324f40e 158 Gene3D G3DSA:3.40.1280.10 1 158 2.1E-69 T 01-11-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DOE78_05405 e9b1442956ecb17edea0d7657324f40e 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 4 157 2.7E-64 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DOE78_05405 e9b1442956ecb17edea0d7657324f40e 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 155 35.05 T 01-11-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DOE78_05405 e9b1442956ecb17edea0d7657324f40e 158 SUPERFAMILY SSF75217 3 155 1.24E-42 T 01-11-2018 IPR029028 Alpha/beta knot methyltransferases DOE78_05405 e9b1442956ecb17edea0d7657324f40e 158 Pfam PF00588 SpoU rRNA Methylase family 3 146 9.0E-34 T 01-11-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DOE78_24105 f8178f9ad00210056093ecada40290dc 160 Pfam PF04073 Aminoacyl-tRNA editing domain 37 146 1.4E-22 T 01-11-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DOE78_24105 f8178f9ad00210056093ecada40290dc 160 SUPERFAMILY SSF55826 7 157 5.89E-40 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DOE78_24105 f8178f9ad00210056093ecada40290dc 160 PIRSF PIRSF006181 2 160 6.1E-63 T 01-11-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DOE78_24105 f8178f9ad00210056093ecada40290dc 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 7 157 4.7E-59 T 01-11-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DOE78_24105 f8178f9ad00210056093ecada40290dc 160 Gene3D G3DSA:3.90.960.10 1 160 2.0E-52 T 01-11-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DOE78_12645 e5e336916935c29bf28839fa2e909dc3 190 Gene3D G3DSA:3.40.50.850 6 190 2.2E-53 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DOE78_12645 e5e336916935c29bf28839fa2e909dc3 190 SUPERFAMILY SSF52499 8 188 1.16E-43 T 01-11-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DOE78_12645 e5e336916935c29bf28839fa2e909dc3 190 Pfam PF00857 Isochorismatase family 9 182 6.5E-33 T 01-11-2018 IPR000868 Isochorismatase-like GO:0003824 DOE78_16360 3efe3827db2cf8f7144811095bed5bd6 162 Pfam PF13047 Protein of unknown function (DUF3907) 12 156 2.0E-63 T 01-11-2018 IPR025013 Protein of unknown function DUF3907 DOE78_01135 5656bb331c631a85fc5e0fad6d6f2373 463 Gene3D G3DSA:1.20.1740.10 16 459 2.3E-131 T 01-11-2018 DOE78_01135 5656bb331c631a85fc5e0fad6d6f2373 463 PIRSF PIRSF006060 1 462 1.7E-96 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_01135 5656bb331c631a85fc5e0fad6d6f2373 463 Pfam PF13520 Amino acid permease 22 437 3.8E-60 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_16660 0062691a0c544b0d2c262b413ba33cbf 380 Pfam PF00535 Glycosyl transferase family 2 43 215 7.5E-20 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_16660 0062691a0c544b0d2c262b413ba33cbf 380 SUPERFAMILY SSF53448 31 294 6.88E-37 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_16660 0062691a0c544b0d2c262b413ba33cbf 380 Gene3D G3DSA:3.90.550.10 24 260 4.9E-31 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_17415 11a68120cc8447304beea372aa53c9ba 321 SMART SM00322 4 68 6.0E-5 T 01-11-2018 IPR004087 K Homology domain GO:0003676 DOE78_17415 11a68120cc8447304beea372aa53c9ba 321 SUPERFAMILY SSF54791 21 67 7.75E-7 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DOE78_17415 11a68120cc8447304beea372aa53c9ba 321 Gene3D G3DSA:3.30.1370.10 7 76 7.5E-6 T 01-11-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DOE78_17415 11a68120cc8447304beea372aa53c9ba 321 Pfam PF02562 PhoH-like protein 113 316 2.5E-97 T 01-11-2018 IPR003714 PhoH-like protein GO:0005524 DOE78_17415 11a68120cc8447304beea372aa53c9ba 321 SUPERFAMILY SSF52540 93 291 3.89E-40 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_17415 11a68120cc8447304beea372aa53c9ba 321 Gene3D G3DSA:3.40.50.300 109 316 1.3E-75 T 01-11-2018 DOE78_09435 83c8f2805053105b001622b2bf3d3bb2 500 SUPERFAMILY SSF51905 6 274 9.58E-22 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09435 83c8f2805053105b001622b2bf3d3bb2 500 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 7 492 3.2E-239 T 01-11-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DOE78_09435 83c8f2805053105b001622b2bf3d3bb2 500 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 4 492 54.209 T 01-11-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DOE78_09435 83c8f2805053105b001622b2bf3d3bb2 500 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 9 490 6.8E-218 T 01-11-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 DOE78_22210 e1ffd93a0c0bbf83d555a21a648c1ecf 314 Pfam PF07670 Nucleoside recognition 176 263 1.3E-7 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_22210 e1ffd93a0c0bbf83d555a21a648c1ecf 314 Pfam PF07670 Nucleoside recognition 17 97 1.2E-6 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 285 295 - T 01-11-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 PRINTS PR00134 Glycosyl hydrolase family 10 signature 115 127 1.3E-16 T 01-11-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 PRINTS PR00134 Glycosyl hydrolase family 10 signature 174 185 1.3E-16 T 01-11-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 PRINTS PR00134 Glycosyl hydrolase family 10 signature 251 263 1.3E-16 T 01-11-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 PRINTS PR00134 Glycosyl hydrolase family 10 signature 223 234 1.3E-16 T 01-11-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 Gene3D G3DSA:3.20.20.80 36 387 5.4E-131 T 01-11-2018 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 SMART SM00633 84 387 6.8E-148 T 01-11-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 SUPERFAMILY SSF51445 40 387 1.4E-104 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_20075 c1ddaac3cfdaf06a2d10209525c91573 387 Pfam PF00331 Glycosyl hydrolase family 10 43 387 1.8E-106 T 01-11-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 DOE78_14505 411d29c5bf4b19a6698ff23d67c7d573 33 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 4 27 7.0E-11 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_14505 411d29c5bf4b19a6698ff23d67c7d573 33 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 2 26 1.5E-12 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 Gene3D G3DSA:3.40.250.10 1 148 9.1E-46 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 Gene3D G3DSA:3.40.250.10 158 275 1.1E-28 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 SMART SM00450 154 272 4.9E-20 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 SMART SM00450 5 131 1.0E-24 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 SUPERFAMILY SSF52821 3 152 3.67E-41 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 Pfam PF00581 Rhodanese-like domain 166 267 8.0E-13 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 Pfam PF00581 Rhodanese-like domain 7 127 1.4E-21 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_21695 0ca27e6a2484384ec2d3a88c16fb11b2 275 SUPERFAMILY SSF52821 149 273 2.88E-28 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_09940 a8cd801a259d5c694af7bd41e6527a1c 115 SUPERFAMILY SSF46785 11 107 2.16E-32 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09940 a8cd801a259d5c694af7bd41e6527a1c 115 Pfam PF03551 Transcriptional regulator PadR-like family 15 87 2.6E-27 T 01-11-2018 IPR005149 Transcription regulator PadR, N-terminal DOE78_09940 a8cd801a259d5c694af7bd41e6527a1c 115 Gene3D G3DSA:1.10.10.10 2 114 8.3E-37 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_14530 2f989ab822fff5c583c565ee33b3431f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 213 5.1E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_14530 2f989ab822fff5c583c565ee33b3431f 217 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 215 1.4E-70 T 01-11-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 DOE78_14530 2f989ab822fff5c583c565ee33b3431f 217 Gene3D G3DSA:1.10.3720.10 1 216 9.1E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_14530 2f989ab822fff5c583c565ee33b3431f 217 SUPERFAMILY SSF161098 3 213 3.01E-48 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_14130 bfb35cbbb5479a2f4d8ec17b9b4016f9 352 Pfam PF00296 Luciferase-like monooxygenase 25 306 7.9E-50 T 01-11-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DOE78_14130 bfb35cbbb5479a2f4d8ec17b9b4016f9 352 Gene3D G3DSA:3.20.20.30 2 352 6.0E-80 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_14130 bfb35cbbb5479a2f4d8ec17b9b4016f9 352 SUPERFAMILY SSF51679 9 348 4.71E-74 T 01-11-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DOE78_09325 2763e5be1927a19e79031bfb696d1994 235 Pfam PF00072 Response regulator receiver domain 8 119 1.4E-23 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_09325 2763e5be1927a19e79031bfb696d1994 235 SUPERFAMILY SSF52172 6 130 1.39E-32 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_09325 2763e5be1927a19e79031bfb696d1994 235 Gene3D G3DSA:3.40.50.2300 3 144 5.8E-29 T 01-11-2018 DOE78_09325 2763e5be1927a19e79031bfb696d1994 235 PIRSF PIRSF006171 4 235 1.3E-77 T 01-11-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DOE78_09325 2763e5be1927a19e79031bfb696d1994 235 Gene3D G3DSA:1.10.10.10 172 220 9.7E-6 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09325 2763e5be1927a19e79031bfb696d1994 235 SMART SM00448 6 119 5.4E-25 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_09565 dcabef82ce19e1b1b1950474f177caef 307 Gene3D G3DSA:3.40.630.30 1 307 2.4E-30 T 01-11-2018 DOE78_09565 dcabef82ce19e1b1b1950474f177caef 307 SUPERFAMILY SSF55729 130 300 5.06E-21 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09565 dcabef82ce19e1b1b1950474f177caef 307 Pfam PF00583 Acetyltransferase (GNAT) family 200 294 8.6E-14 T 01-11-2018 IPR000182 GNAT domain DOE78_03630 fbd1ee80660920a5dae9769f750e703e 185 Pfam PF01380 SIS domain 33 155 9.4E-18 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_03630 fbd1ee80660920a5dae9769f750e703e 185 SUPERFAMILY SSF53697 4 184 1.03E-41 T 01-11-2018 DOE78_03630 fbd1ee80660920a5dae9769f750e703e 185 Gene3D G3DSA:3.40.50.10490 1 185 7.8E-59 T 01-11-2018 DOE78_03630 fbd1ee80660920a5dae9769f750e703e 185 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 8 185 2.7E-74 T 01-11-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 2.3E-59 T 01-11-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 PIRSF PIRSF000124 1 428 8.4E-133 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 PIRSF PIRSF500134 1 431 7.3E-169 T 01-11-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 SUPERFAMILY SSF48179 196 291 4.76E-32 T 01-11-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 Gene3D G3DSA:3.40.50.720 1 194 2.2E-69 T 01-11-2018 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 SUPERFAMILY SSF51735 1 186 1.89E-49 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 196 288 2.0E-37 T 01-11-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 SMART SM00984 311 413 3.3E-39 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 Gene3D G3DSA:1.20.5.100 195 226 1.5E-18 T 01-11-2018 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 SUPERFAMILY SSF52413 298 423 5.62E-33 T 01-11-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 Gene3D G3DSA:3.40.50.720 228 440 4.5E-67 T 01-11-2018 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 311 411 9.4E-29 T 01-11-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DOE78_23215 03401bb7787af8e8f9b295565ee58e1c 446 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 409 1.2E-131 T 01-11-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DOE78_19500 7a585d88aef48c2ddaed44d156b01a91 268 Gene3D G3DSA:1.10.3720.10 71 267 6.2E-22 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_19500 7a585d88aef48c2ddaed44d156b01a91 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 264 4.3E-24 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_19500 7a585d88aef48c2ddaed44d156b01a91 268 SUPERFAMILY SSF161098 71 257 1.2E-29 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_10335 3c12236983f1655e5610d2f720f9ca43 327 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 325 67.624 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_10335 3c12236983f1655e5610d2f720f9ca43 327 Gene3D G3DSA:3.40.47.10 1 327 2.5E-121 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_10335 3c12236983f1655e5610d2f720f9ca43 327 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 325 2.2E-114 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_10335 3c12236983f1655e5610d2f720f9ca43 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 187 3.1E-30 T 01-11-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_10335 3c12236983f1655e5610d2f720f9ca43 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 1.7E-32 T 01-11-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_10335 3c12236983f1655e5610d2f720f9ca43 327 SUPERFAMILY SSF53901 6 325 3.39E-63 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_06305 24ad5529393f657a049b697437e8ed20 119 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 3 110 1.1E-35 T 01-11-2018 IPR018745 Domain of unknown function DUF2294 DOE78_18025 1275960a01c62f195175d7c43ccaa9b5 351 SUPERFAMILY SSF56112 8 305 5.75E-19 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_18025 1275960a01c62f195175d7c43ccaa9b5 351 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 10 314 1.5E-112 T 01-11-2018 IPR014253 Spore coat protein YsxE DOE78_18025 1275960a01c62f195175d7c43ccaa9b5 351 Gene3D G3DSA:3.30.200.20 4 94 1.2E-14 T 01-11-2018 DOE78_18025 1275960a01c62f195175d7c43ccaa9b5 351 Gene3D G3DSA:3.90.1200.10 97 321 5.0E-18 T 01-11-2018 DOE78_18025 1275960a01c62f195175d7c43ccaa9b5 351 Pfam PF01636 Phosphotransferase enzyme family 31 244 5.0E-5 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_02705 75e87e49885bd79a7253a2b2629dd839 221 Pfam PF00665 Integrase core domain 61 175 1.3E-20 T 01-11-2018 IPR001584 Integrase, catalytic core GO:0015074 DOE78_02705 75e87e49885bd79a7253a2b2629dd839 221 Pfam PF13276 HTH-like domain 7 37 1.1E-7 T 01-11-2018 IPR025948 HTH-like domain DOE78_02705 75e87e49885bd79a7253a2b2629dd839 221 Gene3D G3DSA:3.30.420.10 53 219 9.0E-8 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_02705 75e87e49885bd79a7253a2b2629dd839 221 SUPERFAMILY SSF53098 55 215 1.21E-29 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_16170 8d4c6efe60865d5c86397450c44c059f 193 Pfam PF01553 Acyltransferase 21 144 1.5E-23 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DOE78_16170 8d4c6efe60865d5c86397450c44c059f 193 SUPERFAMILY SSF69593 3 190 2.75E-50 T 01-11-2018 DOE78_16170 8d4c6efe60865d5c86397450c44c059f 193 SMART SM00563 35 147 3.8E-33 T 01-11-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DOE78_23915 8ee02d1c5cecd5a4027120b38bf0e0ee 290 Gene3D G3DSA:3.40.800.10 16 289 6.8E-94 T 01-11-2018 DOE78_23915 8ee02d1c5cecd5a4027120b38bf0e0ee 290 PIRSF PIRSF036979 1 290 1.7E-98 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_23915 8ee02d1c5cecd5a4027120b38bf0e0ee 290 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 01-11-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DOE78_23915 8ee02d1c5cecd5a4027120b38bf0e0ee 290 TIGRFAM TIGR01230 agmatinase: agmatinase 10 286 3.6E-116 T 01-11-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DOE78_23915 8ee02d1c5cecd5a4027120b38bf0e0ee 290 Pfam PF00491 Arginase family 23 285 3.2E-80 T 01-11-2018 IPR006035 Ureohydrolase GO:0046872 DOE78_23915 8ee02d1c5cecd5a4027120b38bf0e0ee 290 SUPERFAMILY SSF52768 12 289 4.5E-86 T 01-11-2018 IPR023696 Ureohydrolase domain superfamily DOE78_13385 20e849a809b41f02fbeea401e006b39b 204 Pfam PF04203 Sortase family 71 191 1.9E-29 T 01-11-2018 IPR005754 Sortase family DOE78_13385 20e849a809b41f02fbeea401e006b39b 204 SUPERFAMILY SSF63817 57 194 2.88E-34 T 01-11-2018 IPR023365 Sortase domain superfamily DOE78_13385 20e849a809b41f02fbeea401e006b39b 204 TIGRFAM TIGR01076 sortase_fam: sortase 69 192 7.5E-25 T 01-11-2018 IPR005754 Sortase family DOE78_13385 20e849a809b41f02fbeea401e006b39b 204 Gene3D G3DSA:2.40.260.10 30 199 3.2E-41 T 01-11-2018 IPR023365 Sortase domain superfamily DOE78_22730 ae5d73d3cae14b962c6f144eaa563524 287 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 1.4E-21 T 01-11-2018 IPR019264 Domain of unknown function DUF2179 DOE78_22730 ae5d73d3cae14b962c6f144eaa563524 287 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 18 221 5.3E-69 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_22730 ae5d73d3cae14b962c6f144eaa563524 287 Gene3D G3DSA:3.30.70.120 200 274 1.0E-26 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_22730 ae5d73d3cae14b962c6f144eaa563524 287 PIRSF PIRSF006483 1 287 1.3E-92 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_10695 93dae5aae113cc2798f0835574bfa24f 322 Gene3D G3DSA:3.40.50.12570 187 280 1.3E-64 T 01-11-2018 DOE78_10695 93dae5aae113cc2798f0835574bfa24f 322 PIRSF PIRSF009290 1 322 9.8E-126 T 01-11-2018 IPR024713 Fructosamine deglycase FrlB DOE78_10695 93dae5aae113cc2798f0835574bfa24f 322 Pfam PF01380 SIS domain 19 133 1.3E-10 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_10695 93dae5aae113cc2798f0835574bfa24f 322 Gene3D G3DSA:3.40.50.10490 1 147 9.4E-35 T 01-11-2018 DOE78_10695 93dae5aae113cc2798f0835574bfa24f 322 Gene3D G3DSA:1.10.10.2240 152 302 1.3E-64 T 01-11-2018 DOE78_10695 93dae5aae113cc2798f0835574bfa24f 322 SUPERFAMILY SSF53697 5 321 2.71E-57 T 01-11-2018 DOE78_21035 0b2b617c5a1ab527e419148f3ed3ca9c 166 SUPERFAMILY SSF101307 11 162 9.81E-56 T 01-11-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DOE78_21035 0b2b617c5a1ab527e419148f3ed3ca9c 166 Gene3D G3DSA:1.10.3760.10 2 166 1.8E-76 T 01-11-2018 DOE78_21035 0b2b617c5a1ab527e419148f3ed3ca9c 166 PIRSF PIRSF019587 5 166 3.6E-80 T 01-11-2018 IPR026038 Putative phosphatidylglycerophosphatase DOE78_21035 0b2b617c5a1ab527e419148f3ed3ca9c 166 Pfam PF04608 Phosphatidylglycerophosphatase A 23 159 7.5E-20 T 01-11-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DOE78_13565 5c3c4b2568f661b1c24796f683cf20eb 259 SUPERFAMILY SSF69318 42 126 5.62E-5 T 01-11-2018 DOE78_11840 ce7fb59d3435fd171ec91f5294e011f2 780 SUPERFAMILY SSF49452 224 290 9.81E-5 T 01-11-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 DOE78_11840 ce7fb59d3435fd171ec91f5294e011f2 780 SUPERFAMILY SSF49464 321 375 8.24E-6 T 01-11-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily DOE78_11840 ce7fb59d3435fd171ec91f5294e011f2 780 Gene3D G3DSA:2.60.40.1120 226 311 2.9E-5 T 01-11-2018 DOE78_24180 66b08ca4ab0a5af7706c1c7cd822c378 301 SUPERFAMILY SSF53448 1 277 7.09E-67 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_24180 66b08ca4ab0a5af7706c1c7cd822c378 301 Gene3D G3DSA:3.90.550.10 1 292 2.2E-90 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_24180 66b08ca4ab0a5af7706c1c7cd822c378 301 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 265 9.9E-115 T 01-11-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DOE78_24180 66b08ca4ab0a5af7706c1c7cd822c378 301 Pfam PF00483 Nucleotidyl transferase 5 266 2.5E-32 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 01-11-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 SUPERFAMILY SSF55931 106 442 8.04E-130 T 01-11-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 SUPERFAMILY SSF54368 5 104 6.28E-36 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 5.1E-186 T 01-11-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 SMART SM01230 105 354 1.8E-141 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 99 4.1E-34 T 01-11-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 Gene3D G3DSA:3.30.590.10 108 444 3.3E-148 T 01-11-2018 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 5.9E-142 T 01-11-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 Gene3D G3DSA:3.10.20.70 2 107 4.4E-45 T 01-11-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DOE78_08660 6c64c967ce07d47f8328c8c615790457 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 01-11-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DOE78_14935 0297bcddf6aef96134aff2ddd4d1b32d 152 Gene3D G3DSA:2.60.40.2360 41 152 1.2E-22 T 01-11-2018 IPR038144 Intracellular proteinase inhibitor DOE78_14935 0297bcddf6aef96134aff2ddd4d1b32d 152 Pfam PF12690 Intracellular proteinase inhibitor 55 130 3.2E-17 T 01-11-2018 IPR020481 Intracellular proteinase inhibitor BsuPI DOE78_01345 7487f995f7bde51f7489783e3deb4519 277 Gene3D G3DSA:1.10.490.10 1 137 1.6E-34 T 01-11-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DOE78_01345 7487f995f7bde51f7489783e3deb4519 277 Pfam PF08678 Rsbr N terminal 9 137 2.5E-40 T 01-11-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain DOE78_01345 7487f995f7bde51f7489783e3deb4519 277 Gene3D G3DSA:3.30.750.24 149 269 2.9E-39 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_01345 7487f995f7bde51f7489783e3deb4519 277 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 8 136 2.0E-23 T 01-11-2018 DOE78_01345 7487f995f7bde51f7489783e3deb4519 277 SUPERFAMILY SSF52091 151 254 1.61E-16 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_01345 7487f995f7bde51f7489783e3deb4519 277 Pfam PF01740 STAS domain 156 255 6.5E-14 T 01-11-2018 IPR002645 STAS domain DOE78_10295 54fb54f39e995fa299009b3262e175f9 240 SUPERFAMILY SSF53697 83 236 3.34E-30 T 01-11-2018 DOE78_10295 54fb54f39e995fa299009b3262e175f9 240 SUPERFAMILY SSF46689 4 72 3.23E-19 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_10295 54fb54f39e995fa299009b3262e175f9 240 Gene3D G3DSA:3.40.50.10490 83 240 5.0E-32 T 01-11-2018 DOE78_10295 54fb54f39e995fa299009b3262e175f9 240 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 70 3.9E-15 T 01-11-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DOE78_10295 54fb54f39e995fa299009b3262e175f9 240 Pfam PF01380 SIS domain 107 221 1.1E-15 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_10295 54fb54f39e995fa299009b3262e175f9 240 Gene3D G3DSA:1.10.10.10 3 72 2.3E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 SUPERFAMILY SSF52210 241 384 8.63E-54 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 4.4E-168 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 01-11-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 Gene3D G3DSA:3.40.50.261 240 385 1.3E-56 T 01-11-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 Gene3D G3DSA:3.30.470.20 1 234 1.4E-99 T 01-11-2018 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 Pfam PF00549 CoA-ligase 262 381 3.3E-25 T 01-11-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 385 44.337 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 SUPERFAMILY SSF56059 1 238 2.23E-87 T 01-11-2018 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 PIRSF PIRSF001554 1 385 1.2E-156 T 01-11-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 Gene3D G3DSA:3.30.1490.20 21 104 1.4E-99 T 01-11-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DOE78_08105 aa7f67265940a25ce2795d90261421e8 385 Pfam PF08442 ATP-grasp domain 2 203 6.1E-85 T 01-11-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_12690 28d89b19f1dba261f6cdce11968ed858 140 Pfam PF03965 Penicillinase repressor 18 134 3.0E-24 T 01-11-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 DOE78_12690 28d89b19f1dba261f6cdce11968ed858 140 SUPERFAMILY SSF46785 18 136 1.71E-19 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12690 28d89b19f1dba261f6cdce11968ed858 140 Gene3D G3DSA:1.10.10.10 14 83 1.8E-17 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12690 28d89b19f1dba261f6cdce11968ed858 140 PIRSF PIRSF019455 13 140 6.4E-22 T 01-11-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 DOE78_10975 bd7735f0ae87d35bc2a95fa8591c7fea 252 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 236 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_10975 bd7735f0ae87d35bc2a95fa8591c7fea 252 SUPERFAMILY SSF46689 193 241 5.82E-12 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_10975 bd7735f0ae87d35bc2a95fa8591c7fea 252 Gene3D G3DSA:1.10.10.60 190 245 1.7E-15 T 01-11-2018 DOE78_10975 bd7735f0ae87d35bc2a95fa8591c7fea 252 Gene3D G3DSA:1.10.10.60 139 189 3.5E-12 T 01-11-2018 DOE78_10975 bd7735f0ae87d35bc2a95fa8591c7fea 252 Pfam PF12833 Helix-turn-helix domain 164 241 1.2E-17 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_10975 bd7735f0ae87d35bc2a95fa8591c7fea 252 SMART SM00342 157 240 3.2E-21 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_12385 13976962da3627bf9f0fb6657f082c14 386 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 7 386 4.9E-95 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_12385 13976962da3627bf9f0fb6657f082c14 386 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 215 383 2.5E-42 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_12385 13976962da3627bf9f0fb6657f082c14 386 Gene3D G3DSA:3.30.300.210 230 386 2.5E-41 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_21105 ffb37ab52645aee597d38e633ed649aa 100 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 6.7E-24 T 01-11-2018 IPR014931 Protein of unknown function DUF1805 DOE78_21105 ffb37ab52645aee597d38e633ed649aa 100 Gene3D G3DSA:3.30.1980.10 1 100 2.1E-26 T 01-11-2018 IPR036493 Hypothetical protein YunC superfamily DOE78_21105 ffb37ab52645aee597d38e633ed649aa 100 SUPERFAMILY SSF102891 2 99 4.71E-34 T 01-11-2018 IPR036493 Hypothetical protein YunC superfamily DOE78_08545 912f21ad70515e2ab456210be3418b42 192 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 188 6.4E-65 T 01-11-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DOE78_08545 912f21ad70515e2ab456210be3418b42 192 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DOE78_08545 912f21ad70515e2ab456210be3418b42 192 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 81 4.4E-18 T 01-11-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DOE78_08545 912f21ad70515e2ab456210be3418b42 192 Gene3D G3DSA:1.20.120.1760 3 182 4.4E-9 T 01-11-2018 DOE78_08545 912f21ad70515e2ab456210be3418b42 192 PIRSF PIRSF000847 1 192 6.2E-53 T 01-11-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DOE78_13995 d93bb8e0dad6b55565c6e9db6089d4bd 161 SUPERFAMILY SSF55469 2 159 1.44E-35 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_13995 d93bb8e0dad6b55565c6e9db6089d4bd 161 Gene3D G3DSA:3.40.109.10 2 160 9.1E-37 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_13995 d93bb8e0dad6b55565c6e9db6089d4bd 161 Pfam PF00881 Nitroreductase family 57 140 6.3E-14 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 265 3.0E-85 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 127 6.2E-30 T 01-11-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 SUPERFAMILY SSF55347 128 236 2.4E-38 T 01-11-2018 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 01-11-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 Gene3D G3DSA:3.30.360.10 129 234 2.0E-75 T 01-11-2018 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 PIRSF PIRSF000161 2 265 5.3E-69 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 265 29.328 T 01-11-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 263 3.8E-32 T 01-11-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 SUPERFAMILY SSF51735 3 154 1.0E-35 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_15980 49fa21924929d83ebcc6ae79078e469d 265 Gene3D G3DSA:3.40.50.720 5 262 2.0E-75 T 01-11-2018 DOE78_19455 d4719265de335b9a64bb2b3002452ae6 170 SUPERFAMILY SSF51161 2 168 4.99E-49 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_19455 d4719265de335b9a64bb2b3002452ae6 170 Gene3D G3DSA:2.160.10.10 1 170 9.1E-74 T 01-11-2018 DOE78_19455 d4719265de335b9a64bb2b3002452ae6 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 7.1E-7 T 01-11-2018 IPR001451 Hexapeptide repeat DOE78_00225 3f1c64eccce6b50aecc873065e08157c 261 SUPERFAMILY SSF53335 14 197 1.53E-32 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_00225 3f1c64eccce6b50aecc873065e08157c 261 Pfam PF05175 Methyltransferase small domain 16 125 1.7E-10 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 DOE78_00225 3f1c64eccce6b50aecc873065e08157c 261 Gene3D G3DSA:3.40.50.150 6 252 5.5E-72 T 01-11-2018 DOE78_02910 6194eaeb4e83454c979a17acea41acd3 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 2 100 2.0E-48 T 01-11-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02910 6194eaeb4e83454c979a17acea41acd3 100 Pfam PF00547 Urease, gamma subunit 2 99 8.5E-46 T 01-11-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02910 6194eaeb4e83454c979a17acea41acd3 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.538 T 01-11-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02910 6194eaeb4e83454c979a17acea41acd3 100 PIRSF PIRSF001223 1 100 6.0E-52 T 01-11-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02910 6194eaeb4e83454c979a17acea41acd3 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 5.0E-44 T 01-11-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02910 6194eaeb4e83454c979a17acea41acd3 100 Gene3D G3DSA:3.30.280.10 1 100 5.1E-47 T 01-11-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_02910 6194eaeb4e83454c979a17acea41acd3 100 SUPERFAMILY SSF54111 2 100 2.35E-45 T 01-11-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DOE78_13290 acb43160fc21af7d981dc3722401e416 106 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 6 104 1.2E-25 T 01-11-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DOE78_13290 acb43160fc21af7d981dc3722401e416 106 Gene3D G3DSA:2.102.10.10 3 106 2.7E-22 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_13290 acb43160fc21af7d981dc3722401e416 106 SUPERFAMILY SSF50022 6 104 9.43E-25 T 01-11-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DOE78_13290 acb43160fc21af7d981dc3722401e416 106 Pfam PF13806 Rieske-like [2Fe-2S] domain 9 102 1.6E-15 T 01-11-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DOE78_22640 dc80c771ce2160362859ac7eed0bdaa3 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 272 5.4E-12 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_22640 dc80c771ce2160362859ac7eed0bdaa3 280 Gene3D G3DSA:1.10.3720.10 2 271 1.8E-58 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_22640 dc80c771ce2160362859ac7eed0bdaa3 280 SUPERFAMILY SSF161098 8 280 2.09E-56 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_16500 5ecacec052b235a671550e11f89077f4 219 Pfam PF01144 Coenzyme A transferase 6 201 1.8E-45 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_16500 5ecacec052b235a671550e11f89077f4 219 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 208 2.6E-99 T 01-11-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 DOE78_16500 5ecacec052b235a671550e11f89077f4 219 Gene3D G3DSA:3.40.1080.10 1 214 5.9E-103 T 01-11-2018 DOE78_16500 5ecacec052b235a671550e11f89077f4 219 SUPERFAMILY SSF100950 3 214 9.57E-74 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_16500 5ecacec052b235a671550e11f89077f4 219 SMART SM00882 6 202 2.5E-78 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_16500 5ecacec052b235a671550e11f89077f4 219 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 01-11-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 DOE78_12280 579ca4629d72cba120c3b0f1aeefe434 269 Pfam PF01261 Xylose isomerase-like TIM barrel 24 215 1.8E-26 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_12280 579ca4629d72cba120c3b0f1aeefe434 269 SUPERFAMILY SSF51658 6 257 2.07E-43 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_12280 579ca4629d72cba120c3b0f1aeefe434 269 Gene3D G3DSA:3.20.20.150 3 266 1.8E-46 T 01-11-2018 DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 703 752 3.2E-12 T 01-11-2018 IPR005194 Glycoside hydrolase family 65, C-terminal DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 SUPERFAMILY SSF48208 273 739 1.36E-138 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 PIRSF PIRSF036289 1 764 8.1E-277 T 01-11-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 Gene3D G3DSA:1.50.10.10 316 684 4.5E-137 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 SUPERFAMILY SSF74650 1 268 2.64E-82 T 01-11-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 Gene3D G3DSA:2.60.420.10 685 764 3.8E-20 T 01-11-2018 DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 Gene3D G3DSA:2.70.98.40 1 269 9.2E-87 T 01-11-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 14 266 1.5E-62 T 01-11-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 DOE78_01760 a7ac6b372838904d072124a0a69e04ae 764 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 322 699 2.8E-151 T 01-11-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 DOE78_22615 1f40b1526fde23372cd09b122214365d 491 Gene3D G3DSA:1.10.287.950 184 490 5.5E-60 T 01-11-2018 DOE78_22615 1f40b1526fde23372cd09b122214365d 491 SMART SM00283 217 478 4.4E-51 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_22615 1f40b1526fde23372cd09b122214365d 491 SUPERFAMILY SSF58104 204 487 1.74E-58 T 01-11-2018 DOE78_22615 1f40b1526fde23372cd09b122214365d 491 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 445 1.2E-35 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_01680 6ab11b919214f10f9eff90df764379fa 447 Pfam PF00092 von Willebrand factor type A domain 150 335 7.7E-14 T 01-11-2018 IPR002035 von Willebrand factor, type A DOE78_01680 6ab11b919214f10f9eff90df764379fa 447 Gene3D G3DSA:3.40.50.410 149 343 2.4E-29 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_01680 6ab11b919214f10f9eff90df764379fa 447 SMART SM00327 148 339 2.5E-15 T 01-11-2018 IPR002035 von Willebrand factor, type A DOE78_01680 6ab11b919214f10f9eff90df764379fa 447 SUPERFAMILY SSF53300 149 339 1.48E-23 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_21225 821f8fcbc9dd5e1649f96a1969c5d909 82 ProDom PD065427 YUSU IG COIL COILED BH3491 1 59 5.0E-17 T 01-11-2018 IPR020393 Uncharacterised protein family YusU DOE78_21225 821f8fcbc9dd5e1649f96a1969c5d909 82 Pfam PF10835 Protein of unknown function (DUF2573) 4 79 1.2E-37 T 01-11-2018 IPR020393 Uncharacterised protein family YusU DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.6E-13 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.6E-13 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 1.6E-13 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 1.6E-13 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 Pfam PF12697 Alpha/beta hydrolase family 31 265 2.7E-19 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 SUPERFAMILY SSF53474 7 273 3.99E-60 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 Gene3D G3DSA:3.40.50.1820 2 274 1.2E-62 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.6E-9 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00412 Epoxide hydrolase signature 250 272 1.6E-9 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00412 Epoxide hydrolase signature 35 53 1.6E-9 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_20795 b6f439b9ac577222cbc80c391b806a61 274 PRINTS PR00412 Epoxide hydrolase signature 113 126 1.6E-9 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_20530 719c62e148cd3ab655fe91c21704bdfe 610 Gene3D G3DSA:3.90.25.30 442 541 1.8E-118 T 01-11-2018 DOE78_20530 719c62e148cd3ab655fe91c21704bdfe 610 Gene3D G3DSA:3.40.50.720 275 559 1.8E-118 T 01-11-2018 DOE78_20530 719c62e148cd3ab655fe91c21704bdfe 610 Gene3D G3DSA:3.40.50.720 132 259 1.7E-36 T 01-11-2018 DOE78_20530 719c62e148cd3ab655fe91c21704bdfe 610 Pfam PF02719 Polysaccharide biosynthesis protein 278 561 1.4E-125 T 01-11-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DOE78_20530 719c62e148cd3ab655fe91c21704bdfe 610 Pfam PF13727 CoA-binding domain 66 233 5.4E-14 T 01-11-2018 DOE78_20530 719c62e148cd3ab655fe91c21704bdfe 610 SUPERFAMILY SSF51735 275 539 1.48E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_20530 719c62e148cd3ab655fe91c21704bdfe 610 SUPERFAMILY SSF53335 101 300 6.98E-16 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 Pfam PF00005 ABC transporter 356 506 2.1E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 SMART SM00382 365 554 1.4E-12 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 SUPERFAMILY SSF90123 5 319 9.16E-55 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 Gene3D G3DSA:3.40.50.300 335 585 2.5E-77 T 01-11-2018 DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 Gene3D G3DSA:1.20.1560.10 1 321 2.6E-64 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 Pfam PF00664 ABC transporter transmembrane region 19 293 1.4E-27 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_14020 840a7d9a17abdfd685eca906625fcf69 587 SUPERFAMILY SSF52540 335 578 6.62E-79 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06665 0374f3cf9e41fd9f8f9cdc024b9ac4eb 135 Pfam PF01152 Bacterial-like globin 9 121 1.2E-29 T 01-11-2018 IPR001486 Truncated hemoglobin GO:0019825 DOE78_06665 0374f3cf9e41fd9f8f9cdc024b9ac4eb 135 SUPERFAMILY SSF46458 8 123 2.34E-38 T 01-11-2018 IPR009050 Globin-like superfamily DOE78_06665 0374f3cf9e41fd9f8f9cdc024b9ac4eb 135 Gene3D G3DSA:1.10.490.10 2 132 7.3E-50 T 01-11-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DOE78_14425 5133d3ae405d8c35bec4ed6a2ffb665b 347 Gene3D G3DSA:3.90.550.10 2 222 9.6E-24 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_14425 5133d3ae405d8c35bec4ed6a2ffb665b 347 SUPERFAMILY SSF53448 5 262 3.94E-24 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_14425 5133d3ae405d8c35bec4ed6a2ffb665b 347 Pfam PF00535 Glycosyl transferase family 2 7 174 5.0E-23 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_08570 6beab40e7b4080b26cb542df4a28db67 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 7.2E-40 T 01-11-2018 IPR007347 Sporulation stage V, protein S DOE78_08570 6beab40e7b4080b26cb542df4a28db67 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 6.0E-32 T 01-11-2018 IPR007347 Sporulation stage V, protein S DOE78_08570 6beab40e7b4080b26cb542df4a28db67 86 Gene3D G3DSA:3.30.110.20 1 86 6.8E-36 T 01-11-2018 IPR036882 Alba-like domain superfamily GO:0003676 DOE78_01255 786b3a4ed34622c75196dc3da73bbd74 198 PIRSF PIRSF000709 42 180 1.1E-7 T 01-11-2018 DOE78_01255 786b3a4ed34622c75196dc3da73bbd74 198 Gene3D G3DSA:3.40.50.1240 10 195 3.6E-32 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_01255 786b3a4ed34622c75196dc3da73bbd74 198 SMART SM00855 9 153 1.2E-8 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_01255 786b3a4ed34622c75196dc3da73bbd74 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 48 170 8.4E-23 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_01255 786b3a4ed34622c75196dc3da73bbd74 198 SUPERFAMILY SSF53254 11 180 8.64E-33 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_23150 2e444471e12ad8c846e04d8ae8af9c1d 213 Pfam PF04122 Putative cell wall binding repeat 2 133 209 1.2E-13 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23150 2e444471e12ad8c846e04d8ae8af9c1d 213 Pfam PF04122 Putative cell wall binding repeat 2 32 119 2.8E-17 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23150 2e444471e12ad8c846e04d8ae8af9c1d 213 Gene3D G3DSA:3.40.50.12090 55 151 1.9E-5 T 01-11-2018 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 Pfam PF10415 Fumarase C C-terminus 411 464 1.7E-17 T 01-11-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 9 469 3.1E-238 T 01-11-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 Pfam PF00206 Lyase 16 345 1.7E-109 T 01-11-2018 IPR022761 Fumarate lyase, N-terminal DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 SUPERFAMILY SSF48557 8 465 8.01E-148 T 01-11-2018 IPR008948 L-Aspartase-like GO:0003824 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 3.4E-32 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 3.4E-32 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 3.4E-32 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 3.4E-32 T 01-11-2018 IPR000362 Fumarate lyase family DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.8E-6 T 01-11-2018 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.8E-6 T 01-11-2018 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 Gene3D G3DSA:1.10.275.10 9 142 8.9E-57 T 01-11-2018 IPR024083 Fumarase/histidase, N-terminal DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 Gene3D G3DSA:1.10.40.30 411 462 2.5E-19 T 01-11-2018 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 Gene3D G3DSA:1.20.200.10 143 410 1.2E-114 T 01-11-2018 DOE78_01560 2fe74f80072ac024c66421a942f9c9d1 476 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 01-11-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DOE78_04205 3ae9bb0d2f428be54d8d46cfab4a2c5a 291 SUPERFAMILY SSF81342 21 132 1.65E-5 T 01-11-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DOE78_04205 3ae9bb0d2f428be54d8d46cfab4a2c5a 291 Pfam PF14358 Domain of unknown function (DUF4405) 73 131 6.4E-9 T 01-11-2018 IPR025517 Domain of unknown function DUF4405 DOE78_07820 f0d391d21d2192ade63ed14a0efc32c9 162 Pfam PF01252 Signal peptidase (SPase) II 6 143 7.5E-40 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DOE78_07820 f0d391d21d2192ade63ed14a0efc32c9 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 6.4E-17 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DOE78_07820 f0d391d21d2192ade63ed14a0efc32c9 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 6.4E-17 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DOE78_07820 f0d391d21d2192ade63ed14a0efc32c9 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 6.4E-17 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DOE78_07820 f0d391d21d2192ade63ed14a0efc32c9 162 TIGRFAM TIGR00077 lspA: signal peptidase II 2 151 1.1E-46 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DOE78_07820 f0d391d21d2192ade63ed14a0efc32c9 162 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DOE78_07820 f0d391d21d2192ade63ed14a0efc32c9 162 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 16.499 T 01-11-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 Pfam PF00375 Sodium:dicarboxylate symporter family 13 393 4.2E-68 T 01-11-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 Gene3D G3DSA:1.10.3860.10 3 401 2.2E-75 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 SUPERFAMILY SSF118215 13 394 1.7E-96 T 01-11-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 PRINTS PR00173 Glutamate-aspartate symporter signature 320 339 8.1E-13 T 01-11-2018 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 8.1E-13 T 01-11-2018 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 PRINTS PR00173 Glutamate-aspartate symporter signature 285 311 8.1E-13 T 01-11-2018 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 8.1E-13 T 01-11-2018 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 8.1E-13 T 01-11-2018 DOE78_08985 ee0897715b083e5718d2e7cc4de6da66 410 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 402 35.591 T 01-11-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 DOE78_02925 462348388717c5db33185ab79e8a8fac 148 Pfam PF05194 UreE urease accessory protein, C-terminal domain 77 138 7.1E-9 T 01-11-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 DOE78_02925 462348388717c5db33185ab79e8a8fac 148 Gene3D G3DSA:3.30.70.790 74 147 1.4E-29 T 01-11-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DOE78_02925 462348388717c5db33185ab79e8a8fac 148 SUPERFAMILY SSF69287 1 73 3.01E-21 T 01-11-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily DOE78_02925 462348388717c5db33185ab79e8a8fac 148 PIRSF PIRSF036402 1 148 1.6E-48 T 01-11-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DOE78_02925 462348388717c5db33185ab79e8a8fac 148 Hamap MF_00822 Urease accessory protein UreE [ureE]. 1 147 23.33 T 01-11-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DOE78_02925 462348388717c5db33185ab79e8a8fac 148 SMART SM00988 6 69 1.6E-16 T 01-11-2018 IPR004029 UreE urease accessory, N-terminal DOE78_02925 462348388717c5db33185ab79e8a8fac 148 SUPERFAMILY SSF69737 76 142 1.24E-17 T 01-11-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DOE78_02925 462348388717c5db33185ab79e8a8fac 148 Pfam PF02814 UreE urease accessory protein, N-terminal domain 16 69 6.0E-18 T 01-11-2018 IPR004029 UreE urease accessory, N-terminal DOE78_02925 462348388717c5db33185ab79e8a8fac 148 Gene3D G3DSA:2.60.260.20 1 73 2.6E-23 T 01-11-2018 DOE78_14065 41de83c2616c09db90dfeb748a11990b 319 Gene3D G3DSA:3.40.50.920 186 319 8.7E-42 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_14065 41de83c2616c09db90dfeb748a11990b 319 Gene3D G3DSA:3.40.50.970 1 183 8.5E-54 T 01-11-2018 DOE78_14065 41de83c2616c09db90dfeb748a11990b 319 SMART SM00861 10 175 7.6E-41 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_14065 41de83c2616c09db90dfeb748a11990b 319 Pfam PF02780 Transketolase, C-terminal domain 186 306 1.0E-33 T 01-11-2018 IPR033248 Transketolase, C-terminal domain DOE78_14065 41de83c2616c09db90dfeb748a11990b 319 Pfam PF02779 Transketolase, pyrimidine binding domain 9 173 3.1E-30 T 01-11-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DOE78_14065 41de83c2616c09db90dfeb748a11990b 319 SUPERFAMILY SSF52922 181 315 3.27E-37 T 01-11-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DOE78_14065 41de83c2616c09db90dfeb748a11990b 319 SUPERFAMILY SSF52518 6 176 2.14E-48 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 45.029 T 01-11-2018 IPR022897 HTH-type transcription regulator MntR DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 SUPERFAMILY SSF47979 63 132 7.45E-19 T 01-11-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 Gene3D G3DSA:1.10.10.10 2 73 1.3E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 Gene3D G3DSA:1.10.60.10 74 140 8.1E-31 T 01-11-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 124 7.5E-19 T 01-11-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 SMART SM00529 24 123 1.7E-41 T 01-11-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 SUPERFAMILY SSF46785 3 62 1.49E-16 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_15615 cd0ffb9629e6e4c7b850943ec56d000d 140 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 60 5.1E-25 T 01-11-2018 IPR022687 DTXR-type HTH domain GO:0003677 DOE78_09150 ae273a2e9c68e7a63b5139d952348d4b 314 Pfam PF07859 alpha/beta hydrolase fold 38 266 8.3E-21 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DOE78_09150 ae273a2e9c68e7a63b5139d952348d4b 314 SUPERFAMILY SSF53474 7 270 1.31E-50 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_09150 ae273a2e9c68e7a63b5139d952348d4b 314 Gene3D G3DSA:3.40.50.1820 13 292 9.2E-63 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10540 c39206933fdcfd71f65e4e7b29a4ec9c 401 Gene3D G3DSA:1.20.1250.20 13 390 2.2E-56 T 01-11-2018 DOE78_10540 c39206933fdcfd71f65e4e7b29a4ec9c 401 Pfam PF07690 Major Facilitator Superfamily 18 354 5.3E-48 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_10540 c39206933fdcfd71f65e4e7b29a4ec9c 401 SUPERFAMILY SSF103473 5 388 4.19E-66 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 SUPERFAMILY SSF55021 328 403 1.14E-21 T 01-11-2018 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 Gene3D G3DSA:3.30.70.260 254 402 2.1E-47 T 01-11-2018 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 Gene3D G3DSA:3.30.70.260 260 337 2.1E-47 T 01-11-2018 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 SUPERFAMILY SSF53633 4 243 3.93E-71 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 Pfam PF00696 Amino acid kinase family 3 229 7.4E-53 T 01-11-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 SUPERFAMILY SSF55021 249 323 2.98E-12 T 01-11-2018 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 4.9E-145 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 Gene3D G3DSA:3.40.1160.10 1 253 2.5E-89 T 01-11-2018 IPR036393 Acetylglutamate kinase-like superfamily DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 01-11-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 PIRSF PIRSF000726 58 409 1.7E-131 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 PIRSF PIRSF000726 1 62 4.5E-22 T 01-11-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 Pfam PF13840 ACT domain 335 398 3.2E-14 T 01-11-2018 IPR027795 CASTOR, ACT domain DOE78_18230 27f06b1e7dbc206e1182434ef16b4f1e 409 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 3.4E-116 T 01-11-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DOE78_24620 b2fcad73082c22096ef7b943a8c08efa 312 Pfam PF09991 Predicted membrane protein (DUF2232) 15 301 7.0E-68 T 01-11-2018 IPR018710 Protein of unknown function DUF2232 DOE78_09695 d1729d4b5eb025e6f8f2748df98557ad 227 SUPERFAMILY SSF53448 2 197 2.81E-21 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09695 d1729d4b5eb025e6f8f2748df98557ad 227 Pfam PF00535 Glycosyl transferase family 2 4 138 2.7E-8 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09695 d1729d4b5eb025e6f8f2748df98557ad 227 Gene3D G3DSA:3.90.550.10 1 198 4.6E-17 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_05505 716f83de7878997a49972ed77a3f652b 120 SUPERFAMILY SSF52172 3 118 9.68E-36 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_05505 716f83de7878997a49972ed77a3f652b 120 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05505 716f83de7878997a49972ed77a3f652b 120 SMART SM00448 2 113 6.8E-37 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_05505 716f83de7878997a49972ed77a3f652b 120 Gene3D G3DSA:3.40.50.2300 1 120 4.7E-37 T 01-11-2018 DOE78_05490 0546ac454a5aa680a456a937ea7561e0 346 SUPERFAMILY SSF48371 193 317 2.53E-9 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_05490 0546ac454a5aa680a456a937ea7561e0 346 Gene3D G3DSA:1.25.10.10 230 345 6.9E-7 T 01-11-2018 IPR011989 Armadillo-like helical DOE78_14945 dc7ea692e63e1baf3e3f733bb6fded83 60 Gene3D G3DSA:1.10.8.910 4 60 1.4E-30 T 01-11-2018 IPR038300 SASP, alpha/beta-type superfamily DOE78_14945 dc7ea692e63e1baf3e3f733bb6fded83 60 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 58 7.9E-24 T 01-11-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DOE78_14945 dc7ea692e63e1baf3e3f733bb6fded83 60 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 37 51 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_14945 dc7ea692e63e1baf3e3f733bb6fded83 60 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 19 28 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_13775 06ae4d37fabac5da05dc14f9feac43b6 477 Pfam PF01548 Transposase 29 207 2.6E-16 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DOE78_13775 06ae4d37fabac5da05dc14f9feac43b6 477 Pfam PF02371 Transposase IS116/IS110/IS902 family 321 397 5.0E-16 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DOE78_04425 06ae4d37fabac5da05dc14f9feac43b6 477 Pfam PF01548 Transposase 29 207 2.6E-16 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DOE78_04425 06ae4d37fabac5da05dc14f9feac43b6 477 Pfam PF02371 Transposase IS116/IS110/IS902 family 321 397 5.0E-16 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DOE78_02170 06ae4d37fabac5da05dc14f9feac43b6 477 Pfam PF01548 Transposase 29 207 2.6E-16 T 01-11-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DOE78_02170 06ae4d37fabac5da05dc14f9feac43b6 477 Pfam PF02371 Transposase IS116/IS110/IS902 family 321 397 5.0E-16 T 01-11-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DOE78_04145 af23a5644033d761dbaa8f2055a37db4 155 Pfam PF00258 Flavodoxin 5 136 1.2E-25 T 01-11-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DOE78_04145 af23a5644033d761dbaa8f2055a37db4 155 TIGRFAM TIGR01753 flav_short: flavodoxin 3 142 5.2E-42 T 01-11-2018 IPR010087 Flavodoxin, short chain GO:0010181 DOE78_04145 af23a5644033d761dbaa8f2055a37db4 155 SUPERFAMILY SSF52218 2 146 3.39E-37 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_04145 af23a5644033d761dbaa8f2055a37db4 155 Gene3D G3DSA:3.40.50.360 1 145 3.8E-35 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_07250 6c30ddccb4da343c5960744b6aa47cc2 228 Pfam PF13158 Protein of unknown function (DUF3993) 25 141 1.2E-29 T 01-11-2018 IPR025056 Protein of unknown function DUF3993 DOE78_06270 3107f0430bac6a776f12818bfc855d0b 428 Gene3D G3DSA:1.10.3720.10 171 428 5.5E-65 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06270 3107f0430bac6a776f12818bfc855d0b 428 SUPERFAMILY SSF161098 176 412 1.96E-53 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06270 3107f0430bac6a776f12818bfc855d0b 428 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 415 4.0E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_06270 3107f0430bac6a776f12818bfc855d0b 428 SUPERFAMILY SSF160964 80 180 4.32E-12 T 01-11-2018 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 SMART SM00411 1 90 7.2E-37 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 Gene3D G3DSA:4.10.520.10 1 90 1.8E-34 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.7E-16 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.7E-16 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.7E-16 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 01-11-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 SUPERFAMILY SSF47729 1 90 1.41E-29 T 01-11-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DOE78_12265 cf50fd305d81abf9e21f240866ecaa82 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.8E-30 T 01-11-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DOE78_15375 4762b44adfd354fcd5fe2e534923e1f1 57 Pfam PF14162 YozD-like protein 1 57 4.0E-32 T 01-11-2018 IPR025545 YozD-like protein DOE78_15375 4762b44adfd354fcd5fe2e534923e1f1 57 ProDom PD052277 YOZD 1 44 2.0E-12 T 01-11-2018 DOE78_07495 b8b62a2cc9704297b8cecc8fe64c634c 111 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 4 111 1.0E-51 T 01-11-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DOE78_07495 b8b62a2cc9704297b8cecc8fe64c634c 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 31 102 4.8E-14 T 01-11-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DOE78_14855 a660773c401f2be9fc49adbd0b1144ae 152 SUPERFAMILY SSF109854 2 147 2.44E-33 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_14855 a660773c401f2be9fc49adbd0b1144ae 152 Pfam PF05163 DinB family 6 147 4.5E-16 T 01-11-2018 IPR007837 DNA damage-inducible protein DinB DOE78_14855 a660773c401f2be9fc49adbd0b1144ae 152 Gene3D G3DSA:1.20.120.450 1 141 5.7E-37 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_11680 d71eb8bd46ccd4d0c7335679deeede91 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_11680 d71eb8bd46ccd4d0c7335679deeede91 486 Gene3D G3DSA:3.40.309.10 257 437 4.9E-153 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_11680 d71eb8bd46ccd4d0c7335679deeede91 486 Gene3D G3DSA:3.40.605.10 13 256 4.9E-153 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_11680 d71eb8bd46ccd4d0c7335679deeede91 486 Pfam PF00171 Aldehyde dehydrogenase family 16 475 1.2E-153 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_11680 d71eb8bd46ccd4d0c7335679deeede91 486 SUPERFAMILY SSF53720 5 479 1.7E-145 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_18460 01a431e484281a0b8ad85cbac039f208 152 Pfam PF04284 Protein of unknown function (DUF441) 7 146 1.1E-48 T 01-11-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DOE78_18460 01a431e484281a0b8ad85cbac039f208 152 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 131 5.0E-33 T 01-11-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DOE78_18460 01a431e484281a0b8ad85cbac039f208 152 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 19.166 T 01-11-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DOE78_05090 930bfd955a52a775f11c263ccb5a2f11 428 Gene3D G3DSA:3.40.720.10 2 427 3.3E-69 T 01-11-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DOE78_05090 930bfd955a52a775f11c263ccb5a2f11 428 SUPERFAMILY SSF53649 6 411 7.2E-67 T 01-11-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DOE78_05090 930bfd955a52a775f11c263ccb5a2f11 428 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 8 370 9.3E-49 T 01-11-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 DOE78_18590 6cf75cee0289047442f2802edb063a38 280 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 11 274 2.0E-8 T 01-11-2018 DOE78_18590 6cf75cee0289047442f2802edb063a38 280 Pfam PF12787 EcsC protein family 9 271 2.9E-56 T 01-11-2018 IPR024787 EcsC protein DOE78_22355 98f2fea55f552019ab890e3b99e62dd8 283 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 124 1.6E-10 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_22355 98f2fea55f552019ab890e3b99e62dd8 283 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 278 9.3E-6 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_22355 98f2fea55f552019ab890e3b99e62dd8 283 Gene3D G3DSA:3.10.180.10 10 134 5.1E-27 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_22355 98f2fea55f552019ab890e3b99e62dd8 283 Gene3D G3DSA:3.10.180.10 168 283 4.0E-22 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_22355 98f2fea55f552019ab890e3b99e62dd8 283 SUPERFAMILY SSF54593 10 169 1.25E-38 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_22355 98f2fea55f552019ab890e3b99e62dd8 283 SUPERFAMILY SSF54593 170 281 5.77E-25 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_22355 98f2fea55f552019ab890e3b99e62dd8 283 ProSitePatterns PS00934 Glyoxalase I signature 1. 172 193 - T 01-11-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DOE78_06355 5bde8fa80f0ad3cc15d2183f54f9331d 240 Gene3D G3DSA:3.40.50.10420 46 237 7.9E-37 T 01-11-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DOE78_06355 5bde8fa80f0ad3cc15d2183f54f9331d 240 Pfam PF02589 LUD domain 60 237 2.9E-29 T 01-11-2018 IPR003741 LUD domain DOE78_06355 5bde8fa80f0ad3cc15d2183f54f9331d 240 SUPERFAMILY SSF100950 47 238 3.93E-40 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_06355 5bde8fa80f0ad3cc15d2183f54f9331d 240 Hamap MF_02104 Lactate utilization protein C [lutC]. 5 237 45.709 T 01-11-2018 IPR022823 Lactate utilization protein C DOE78_02180 5caa332fd5936923881f6795248b6492 300 Pfam PF00892 EamA-like transporter family 6 139 3.9E-23 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_02180 5caa332fd5936923881f6795248b6492 300 Pfam PF00892 EamA-like transporter family 151 286 2.1E-26 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_02180 5caa332fd5936923881f6795248b6492 300 SUPERFAMILY SSF103481 186 290 4.45E-18 T 01-11-2018 DOE78_02180 5caa332fd5936923881f6795248b6492 300 SUPERFAMILY SSF103481 43 140 2.62E-11 T 01-11-2018 DOE78_08685 913873b3d0866c10b7bdadf7181a80ab 77 Hamap MF_01103 UPF0291 protein . 2 60 15.434 T 01-11-2018 IPR009242 Protein of unknown function DUF896 DOE78_08685 913873b3d0866c10b7bdadf7181a80ab 77 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 3.4E-29 T 01-11-2018 IPR009242 Protein of unknown function DUF896 DOE78_08685 913873b3d0866c10b7bdadf7181a80ab 77 Gene3D G3DSA:1.10.287.540 1 56 5.6E-22 T 01-11-2018 DOE78_08685 913873b3d0866c10b7bdadf7181a80ab 77 SUPERFAMILY SSF158221 1 42 1.31E-13 T 01-11-2018 DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 Gene3D G3DSA:3.90.550.10 504 593 2.1E-17 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 Gene3D G3DSA:3.90.550.10 252 473 1.9E-23 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 SUPERFAMILY SSF53448 261 420 2.16E-19 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 Pfam PF00535 Glycosyl transferase family 2 264 365 1.0E-14 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 Pfam PF00535 Glycosyl transferase family 2 513 592 7.6E-13 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 Gene3D G3DSA:3.90.550.10 1 168 1.3E-5 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 SUPERFAMILY SSF53448 511 592 3.75E-17 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09600 3a0339af410365b660acfb1a1269f2c3 624 SUPERFAMILY SSF53448 3 152 5.2E-7 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 Pfam PF01750 Hydrogenase maturation protease 22 140 6.1E-12 T 01-11-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 Gene3D G3DSA:3.40.50.1450 1 149 2.7E-27 T 01-11-2018 IPR023430 Peptidase HybD-like domain superfamily DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 142 1.6E-30 T 01-11-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 PRINTS PR00446 Hydrogen uptake protein signature 4 16 6.0E-9 T 01-11-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 PRINTS PR00446 Hydrogen uptake protein signature 67 83 6.0E-9 T 01-11-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 PRINTS PR00446 Hydrogen uptake protein signature 56 66 6.0E-9 T 01-11-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 PRINTS PR00446 Hydrogen uptake protein signature 16 27 6.0E-9 T 01-11-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 DOE78_16605 513223d1de6ca71e35ad8994f9007d79 151 SUPERFAMILY SSF53163 3 145 1.44E-29 T 01-11-2018 IPR023430 Peptidase HybD-like domain superfamily DOE78_10235 065b1a9ce3724ccdef3241771538eb83 300 SUPERFAMILY SSF103481 198 282 3.92E-8 T 01-11-2018 DOE78_10235 065b1a9ce3724ccdef3241771538eb83 300 SUPERFAMILY SSF103481 48 137 3.4E-6 T 01-11-2018 DOE78_10235 065b1a9ce3724ccdef3241771538eb83 300 Pfam PF00892 EamA-like transporter family 150 281 9.9E-13 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_10235 065b1a9ce3724ccdef3241771538eb83 300 Pfam PF00892 EamA-like transporter family 9 136 2.7E-9 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_15930 76a5bf9312bacbd0e15f86c5d27b7058 284 Gene3D G3DSA:3.60.15.10 37 283 1.9E-21 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_15930 76a5bf9312bacbd0e15f86c5d27b7058 284 SUPERFAMILY SSF56281 37 278 7.01E-8 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_20110 d970a707a02310fcbc38f2a94e57c81e 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 11 200 1.2E-26 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain DOE78_20110 d970a707a02310fcbc38f2a94e57c81e 218 SUPERFAMILY SSF52266 4 212 3.66E-42 T 01-11-2018 DOE78_20110 d970a707a02310fcbc38f2a94e57c81e 218 Gene3D G3DSA:3.40.50.1110 1 218 2.9E-85 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_20805 a0408098d86116dfc7e4d89929a6f703 388 Pfam PF00155 Aminotransferase class I and II 65 383 1.0E-39 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_20805 a0408098d86116dfc7e4d89929a6f703 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 387 2.5E-151 T 01-11-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DOE78_20805 a0408098d86116dfc7e4d89929a6f703 388 SUPERFAMILY SSF53383 4 387 3.9E-99 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_20805 a0408098d86116dfc7e4d89929a6f703 388 Gene3D G3DSA:3.90.1150.10 28 382 1.5E-148 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_20805 a0408098d86116dfc7e4d89929a6f703 388 Gene3D G3DSA:3.40.640.10 62 284 1.5E-148 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_03095 1bb8d6bcf7a92782cc38c9c2d1ec721a 227 Gene3D G3DSA:1.10.3720.10 14 225 9.2E-56 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03095 1bb8d6bcf7a92782cc38c9c2d1ec721a 227 SUPERFAMILY SSF161098 22 223 3.14E-47 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03095 1bb8d6bcf7a92782cc38c9c2d1ec721a 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 116 7.3E-31 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DOE78_03095 1bb8d6bcf7a92782cc38c9c2d1ec721a 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 2.8E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_14525 fbdaeab8734591cf32a19a3729f71ae4 219 SUPERFAMILY SSF53850 1 215 2.9E-52 T 01-11-2018 DOE78_14525 fbdaeab8734591cf32a19a3729f71ae4 219 Gene3D G3DSA:3.40.190.10 71 178 3.5E-69 T 01-11-2018 DOE78_14525 fbdaeab8734591cf32a19a3729f71ae4 219 PIRSF PIRSF004846 1 219 2.5E-68 T 01-11-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DOE78_14525 fbdaeab8734591cf32a19a3729f71ae4 219 Gene3D G3DSA:3.40.190.10 1 215 3.5E-69 T 01-11-2018 DOE78_14525 fbdaeab8734591cf32a19a3729f71ae4 219 Pfam PF13531 Bacterial extracellular solute-binding protein 1 215 2.0E-39 T 01-11-2018 DOE78_14525 fbdaeab8734591cf32a19a3729f71ae4 219 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 1 214 3.3E-60 T 01-11-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DOE78_00105 fd54f0d60de1a4486ef4fd12678a3770 222 PIRSF PIRSF000705 2 220 3.5E-66 T 01-11-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 DOE78_00105 fd54f0d60de1a4486ef4fd12678a3770 222 Gene3D G3DSA:3.40.50.300 12 217 4.4E-59 T 01-11-2018 DOE78_00105 fd54f0d60de1a4486ef4fd12678a3770 222 Pfam PF01712 Deoxynucleoside kinase 15 215 8.8E-66 T 01-11-2018 IPR031314 Deoxynucleoside kinase domain DOE78_00105 fd54f0d60de1a4486ef4fd12678a3770 222 SUPERFAMILY SSF52540 14 217 1.17E-48 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19115 eccb1b0babe4b66761840e6e89e55c16 254 SUPERFAMILY SSF52540 92 245 7.27E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19115 eccb1b0babe4b66761840e6e89e55c16 254 Gene3D G3DSA:3.40.50.300 55 254 4.2E-29 T 01-11-2018 DOE78_01615 8f232a895cad04114a2fce3c9b3bf84e 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 452 8.7E-89 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_01615 8f232a895cad04114a2fce3c9b3bf84e 541 Gene3D G3DSA:3.10.105.10 283 507 2.5E-138 T 01-11-2018 DOE78_01615 8f232a895cad04114a2fce3c9b3bf84e 541 PIRSF PIRSF002741 3 535 1.3E-95 T 01-11-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DOE78_01615 8f232a895cad04114a2fce3c9b3bf84e 541 Gene3D G3DSA:3.40.190.10 69 282 2.5E-138 T 01-11-2018 DOE78_01615 8f232a895cad04114a2fce3c9b3bf84e 541 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 42 537 1.6E-207 T 01-11-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 DOE78_01615 8f232a895cad04114a2fce3c9b3bf84e 541 SUPERFAMILY SSF53850 40 534 1.32E-119 T 01-11-2018 DOE78_10805 38a619794439bdb685354aae264f2796 364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 204 1.5E-13 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10805 38a619794439bdb685354aae264f2796 364 SUPERFAMILY SSF55874 198 362 6.16E-36 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10805 38a619794439bdb685354aae264f2796 364 SMART SM00387 255 364 2.9E-29 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_10805 38a619794439bdb685354aae264f2796 364 SMART SM00388 142 209 1.5E-12 T 01-11-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DOE78_10805 38a619794439bdb685354aae264f2796 364 Gene3D G3DSA:3.30.565.10 213 364 1.2E-35 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_10805 38a619794439bdb685354aae264f2796 364 SUPERFAMILY SSF47384 130 209 3.14E-16 T 01-11-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DOE78_10805 38a619794439bdb685354aae264f2796 364 Gene3D G3DSA:1.10.287.130 124 212 1.6E-17 T 01-11-2018 DOE78_10805 38a619794439bdb685354aae264f2796 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 320 7.3E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10805 38a619794439bdb685354aae264f2796 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 306 7.3E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10805 38a619794439bdb685354aae264f2796 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 345 7.3E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_10805 38a619794439bdb685354aae264f2796 364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 362 5.1E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_05205 84726b4e64f64306c8de56e591131bf4 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 297 1.3E-31 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_05205 84726b4e64f64306c8de56e591131bf4 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 73 2.3E-17 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE78_05205 84726b4e64f64306c8de56e591131bf4 298 Gene3D G3DSA:1.10.3720.10 85 298 1.8E-26 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_05205 84726b4e64f64306c8de56e591131bf4 298 SUPERFAMILY SSF161098 91 283 1.26E-32 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_23635 ab604e09e13acbc5ca501e6845bb6f1a 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 104 20.948 T 01-11-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 DOE78_23635 ab604e09e13acbc5ca501e6845bb6f1a 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 99 5.1E-26 T 01-11-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DOE78_12355 1b47a935d6409abd17e4f09546f15f3c 499 Pfam PF00474 Sodium:solute symporter family 39 439 1.7E-9 T 01-11-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DOE78_12355 1b47a935d6409abd17e4f09546f15f3c 499 Gene3D G3DSA:1.20.1730.10 7 498 3.3E-47 T 01-11-2018 IPR038377 Sodium/glucose symporter superfamily DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 SUPERFAMILY SSF53671 13 317 9.56E-109 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 5.6E-26 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 141 152 5.6E-26 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 278 5.6E-26 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 5.6E-26 T 01-11-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 14 154 5.4E-50 T 01-11-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 13 317 81.819 T 01-11-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 14 316 3.3E-132 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 161 313 6.4E-61 T 01-11-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 Gene3D G3DSA:3.40.50.1370 14 313 2.2E-124 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 Gene3D G3DSA:3.40.50.1370 157 312 2.2E-124 T 01-11-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00102 Ornithine carbamoyltransferase signature 90 103 7.7E-30 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00102 Ornithine carbamoyltransferase signature 233 243 7.7E-30 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00102 Ornithine carbamoyltransferase signature 57 71 7.7E-30 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00102 Ornithine carbamoyltransferase signature 295 306 7.7E-30 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DOE78_06495 0609bbeab5304fb6cc63a0ef9812f2f4 317 PRINTS PR00102 Ornithine carbamoyltransferase signature 130 144 7.7E-30 T 01-11-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DOE78_06300 f06df0074a013d125a3c5cf4dc1f316a 423 Pfam PF07690 Major Facilitator Superfamily 22 367 2.2E-35 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_06300 f06df0074a013d125a3c5cf4dc1f316a 423 SUPERFAMILY SSF103473 5 409 1.03E-58 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_06300 f06df0074a013d125a3c5cf4dc1f316a 423 Gene3D G3DSA:1.20.1250.20 1 405 5.1E-55 T 01-11-2018 DOE78_02700 db9f0005b772ad59e240fee29c3b9ef6 86 SUPERFAMILY SSF46689 2 77 1.47E-9 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02700 db9f0005b772ad59e240fee29c3b9ef6 86 Pfam PF13518 Helix-turn-helix domain 3 38 4.2E-6 T 01-11-2018 DOE78_20115 54e78613b429ebbfbb4bbd9ffad72f27 253 Pfam PF01522 Polysaccharide deacetylase 90 212 3.4E-34 T 01-11-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DOE78_20115 54e78613b429ebbfbb4bbd9ffad72f27 253 Gene3D G3DSA:3.20.20.370 30 252 2.8E-68 T 01-11-2018 DOE78_20115 54e78613b429ebbfbb4bbd9ffad72f27 253 SUPERFAMILY SSF88713 51 215 3.46E-44 T 01-11-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DOE78_22100 2d46497c4b3ffb63bd654bcad4d67d8e 82 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 74 2.1E-16 T 01-11-2018 IPR008554 Glutaredoxin-like DOE78_22100 2d46497c4b3ffb63bd654bcad4d67d8e 82 Gene3D G3DSA:3.40.30.10 2 76 3.5E-19 T 01-11-2018 DOE78_22100 2d46497c4b3ffb63bd654bcad4d67d8e 82 SUPERFAMILY SSF52833 2 77 2.97E-18 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_07020 04a7c6c0bca53e775daa51828e999cf2 391 Gene3D G3DSA:3.90.1150.10 29 384 3.1E-116 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_07020 04a7c6c0bca53e775daa51828e999cf2 391 Pfam PF00155 Aminotransferase class I and II 34 384 4.0E-71 T 01-11-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DOE78_07020 04a7c6c0bca53e775daa51828e999cf2 391 Gene3D G3DSA:3.40.640.10 45 286 3.1E-116 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_07020 04a7c6c0bca53e775daa51828e999cf2 391 SUPERFAMILY SSF53383 6 387 3.89E-105 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_03460 e95ab1773a7632da0f7f3b9ec800b2ad 274 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 7 268 1.1E-64 T 01-11-2018 IPR017039 Virulence factor BrkB DOE78_03460 e95ab1773a7632da0f7f3b9ec800b2ad 274 Pfam PF03631 Virulence factor BrkB 17 269 6.0E-71 T 01-11-2018 IPR017039 Virulence factor BrkB DOE78_03460 e95ab1773a7632da0f7f3b9ec800b2ad 274 PIRSF PIRSF035875 3 273 3.4E-83 T 01-11-2018 IPR017039 Virulence factor BrkB DOE78_22915 21a015cb3bf118d42e6a2a19905ef92e 293 Gene3D G3DSA:1.20.1330.10 40 239 1.0E-49 T 01-11-2018 DOE78_22915 21a015cb3bf118d42e6a2a19905ef92e 293 Pfam PF00700 Bacterial flagellin C-terminal helical region 211 292 1.2E-6 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DOE78_22915 21a015cb3bf118d42e6a2a19905ef92e 293 SUPERFAMILY SSF64518 1 293 1.19E-69 T 01-11-2018 DOE78_22915 21a015cb3bf118d42e6a2a19905ef92e 293 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 184 1.7E-55 T 01-11-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 DOE78_22915 21a015cb3bf118d42e6a2a19905ef92e 293 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 140 1.3E-22 T 01-11-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DOE78_02035 2ff155e55aade4ec4034e6ffd48ad28b 227 Pfam PF03737 Aldolase/RraA 21 169 2.9E-39 T 01-11-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DOE78_02035 2ff155e55aade4ec4034e6ffd48ad28b 227 SUPERFAMILY SSF89562 18 180 1.83E-45 T 01-11-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DOE78_02035 2ff155e55aade4ec4034e6ffd48ad28b 227 Gene3D G3DSA:3.50.30.100 2 191 2.1E-56 T 01-11-2018 DOE78_06610 35c319da418d8181ea0893700445392e 342 SUPERFAMILY SSF161098 135 324 2.62E-28 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06610 35c319da418d8181ea0893700445392e 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 341 1.1E-32 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_06610 35c319da418d8181ea0893700445392e 342 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 84 5.1E-14 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE78_06610 35c319da418d8181ea0893700445392e 342 Gene3D G3DSA:1.10.3720.10 130 342 1.3E-26 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_20445 79069b86628fbcea26d4ecc333bbf168 382 Pfam PF00534 Glycosyl transferases group 1 240 376 9.9E-30 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_20445 79069b86628fbcea26d4ecc333bbf168 382 Gene3D G3DSA:3.40.50.2000 129 216 1.9E-36 T 01-11-2018 DOE78_20445 79069b86628fbcea26d4ecc333bbf168 382 Gene3D G3DSA:3.40.50.2000 217 377 1.9E-36 T 01-11-2018 DOE78_20445 79069b86628fbcea26d4ecc333bbf168 382 SUPERFAMILY SSF53756 17 377 5.1E-43 T 01-11-2018 DOE78_21245 31a2106f0b2d0aa9ed9dbadb9b83bd58 334 Gene3D G3DSA:1.10.3470.10 7 333 2.8E-91 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_21245 31a2106f0b2d0aa9ed9dbadb9b83bd58 334 Pfam PF01032 FecCD transport family 20 329 4.9E-94 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_21245 31a2106f0b2d0aa9ed9dbadb9b83bd58 334 SUPERFAMILY SSF81345 7 329 4.05E-81 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_24020 7174dc935abb51d6b13cd1a2bebc29e1 77 Pfam PF02597 ThiS family 4 75 4.8E-16 T 01-11-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DOE78_24020 7174dc935abb51d6b13cd1a2bebc29e1 77 Gene3D G3DSA:3.10.20.30 1 75 9.4E-21 T 01-11-2018 IPR012675 Beta-grasp domain superfamily DOE78_24020 7174dc935abb51d6b13cd1a2bebc29e1 77 SUPERFAMILY SSF54285 1 74 4.07E-17 T 01-11-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DOE78_24020 7174dc935abb51d6b13cd1a2bebc29e1 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 75 4.1E-19 T 01-11-2018 DOE78_24325 c60c77688962039ea5c93707e6e2a2b2 443 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 13 433 1.0E-173 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_24325 c60c77688962039ea5c93707e6e2a2b2 443 PIRSF PIRSF006351 1 441 7.5E-147 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_24325 c60c77688962039ea5c93707e6e2a2b2 443 Pfam PF02378 Phosphotransferase system, EIIC 30 359 9.0E-68 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_24325 c60c77688962039ea5c93707e6e2a2b2 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 433 1.0E-173 T 01-11-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DOE78_21570 f7199170a11c49cfbd302edc8fb54149 188 Gene3D G3DSA:1.10.357.10 1 146 1.5E-7 T 01-11-2018 DOE78_21570 f7199170a11c49cfbd302edc8fb54149 188 SUPERFAMILY SSF46689 3 56 5.99E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_09060 29aef2c6d390c87ebc4611d014e5797d 330 SUPERFAMILY SSF52518 7 329 1.84E-103 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_09060 29aef2c6d390c87ebc4611d014e5797d 330 Gene3D G3DSA:3.40.50.970 1 330 1.4E-126 T 01-11-2018 DOE78_09060 29aef2c6d390c87ebc4611d014e5797d 330 Pfam PF00676 Dehydrogenase E1 component 22 319 1.8E-97 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DOE78_04575 36d5d08b7ea1b36e1a507d6df0e84cd7 296 Gene3D G3DSA:3.10.310.10 130 281 6.2E-36 T 01-11-2018 DOE78_04575 36d5d08b7ea1b36e1a507d6df0e84cd7 296 Pfam PF02567 Phenazine biosynthesis-like protein 9 286 5.0E-67 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DOE78_04575 36d5d08b7ea1b36e1a507d6df0e84cd7 296 SUPERFAMILY SSF54506 4 289 8.48E-61 T 01-11-2018 DOE78_04575 36d5d08b7ea1b36e1a507d6df0e84cd7 296 PIRSF PIRSF016184 1 292 1.2E-78 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DOE78_04575 36d5d08b7ea1b36e1a507d6df0e84cd7 296 Gene3D G3DSA:3.10.310.10 1 129 1.2E-38 T 01-11-2018 DOE78_04575 36d5d08b7ea1b36e1a507d6df0e84cd7 296 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 291 1.3E-82 T 01-11-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DOE78_02555 69479cab76a959fdf72c6b40f4074b21 446 Pfam PF13347 MFS/sugar transport protein 17 430 7.4E-91 T 01-11-2018 DOE78_02555 69479cab76a959fdf72c6b40f4074b21 446 Gene3D G3DSA:1.20.1250.20 14 209 7.3E-11 T 01-11-2018 DOE78_02555 69479cab76a959fdf72c6b40f4074b21 446 Gene3D G3DSA:1.20.1250.20 228 441 9.7E-10 T 01-11-2018 DOE78_02555 69479cab76a959fdf72c6b40f4074b21 446 SUPERFAMILY SSF103473 16 434 7.19E-32 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_02555 69479cab76a959fdf72c6b40f4074b21 446 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 14 440 1.3E-102 T 01-11-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 DOE78_19535 be4c956c76974718ace7f83477421fbc 52 Pfam PF12606 Tumour necrosis factor receptor superfamily member 19 1 41 5.6E-16 T 01-11-2018 IPR022248 TNF receptor family, RELT DOE78_04635 cdd58dc1aabf841f8e7111738be8d164 249 Pfam PF01048 Phosphorylase superfamily 25 245 3.1E-37 T 01-11-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DOE78_04635 cdd58dc1aabf841f8e7111738be8d164 249 SUPERFAMILY SSF53167 15 249 6.15E-57 T 01-11-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DOE78_04635 cdd58dc1aabf841f8e7111738be8d164 249 Gene3D G3DSA:3.40.50.1580 9 249 1.1E-64 T 01-11-2018 DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.6E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.6E-9 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 Gene3D G3DSA:1.10.10.10 8 76 6.5E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 SMART SM00866 94 234 4.7E-32 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 Gene3D G3DSA:3.40.1410.10 77 238 1.9E-42 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 SUPERFAMILY SSF64288 61 237 9.26E-43 T 01-11-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 SUPERFAMILY SSF46785 1 87 3.86E-23 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 SMART SM00345 14 73 1.1E-17 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 Pfam PF07702 UTRA domain 95 233 2.0E-31 T 01-11-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DOE78_10680 75a1a6d7f0fb43173cd386bb07cd4f7c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 1.4E-18 T 01-11-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DOE78_18635 6c7331146fad64c6babeae53eb5e6af3 301 Pfam PF08378 Nuclease-related domain 35 143 2.2E-14 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_17455 14a8e7040b944c85d9013ef07d2f7c68 307 Pfam PF02690 Na+/Pi-cotransporter 159 252 3.8E-17 T 01-11-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DOE78_17455 14a8e7040b944c85d9013ef07d2f7c68 307 Pfam PF02690 Na+/Pi-cotransporter 13 145 1.2E-35 T 01-11-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DOE78_17455 14a8e7040b944c85d9013ef07d2f7c68 307 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 4 303 3.8E-71 T 01-11-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 DOE78_03475 c4f86a1f7f9fa49d915b072d1f07decf 130 Gene3D G3DSA:3.30.300.20 4 128 9.6E-25 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_03475 c4f86a1f7f9fa49d915b072d1f07decf 130 SUPERFAMILY SSF82784 18 125 5.1E-22 T 01-11-2018 IPR036102 OsmC/Ohr superfamily DOE78_03475 c4f86a1f7f9fa49d915b072d1f07decf 130 Pfam PF02566 OsmC-like protein 26 119 1.5E-16 T 01-11-2018 IPR003718 OsmC/Ohr family DOE78_02415 173c47fe0390067029860f79054ec809 448 Pfam PF02435 Levansucrase/Invertase 52 445 3.2E-94 T 01-11-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 DOE78_02415 173c47fe0390067029860f79054ec809 448 Gene3D G3DSA:2.115.10.20 22 447 6.2E-136 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_02415 173c47fe0390067029860f79054ec809 448 SUPERFAMILY SSF75005 39 441 4.43E-56 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_20875 dfd443ca5d17b33d3282f8ff28a41dcf 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 4.9E-20 T 01-11-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DOE78_20875 dfd443ca5d17b33d3282f8ff28a41dcf 94 PIRSF PIRSF028784 1 92 8.0E-35 T 01-11-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DOE78_22500 32614f130096a98c91e37f9ebea0f9b0 436 Gene3D G3DSA:1.20.1250.20 21 424 6.7E-38 T 01-11-2018 DOE78_22500 32614f130096a98c91e37f9ebea0f9b0 436 SUPERFAMILY SSF103473 23 424 4.71E-45 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_22500 32614f130096a98c91e37f9ebea0f9b0 436 Pfam PF07690 Major Facilitator Superfamily 45 348 3.4E-21 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_08160 a5a04d58bbea7e32e68741a5b83f14c5 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 86 99 6.4E-17 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DOE78_08160 a5a04d58bbea7e32e68741a5b83f14c5 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 65 81 6.4E-17 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DOE78_08160 a5a04d58bbea7e32e68741a5b83f14c5 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 31 47 6.4E-17 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DOE78_08160 a5a04d58bbea7e32e68741a5b83f14c5 101 Pfam PF02049 Flagellar hook-basal body complex protein FliE 16 101 2.7E-32 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DOE78_08160 a5a04d58bbea7e32e68741a5b83f14c5 101 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 101 18.946 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DOE78_08160 a5a04d58bbea7e32e68741a5b83f14c5 101 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 20 101 6.1E-29 T 01-11-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DOE78_05375 4a35f6f02b76802034a2b8cca30e7dd7 121 SUPERFAMILY SSF46785 4 108 1.99E-32 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_05375 4a35f6f02b76802034a2b8cca30e7dd7 121 Pfam PF01638 HxlR-like helix-turn-helix 16 104 9.4E-40 T 01-11-2018 IPR002577 Helix-turn-helix, HxlR type DOE78_05375 4a35f6f02b76802034a2b8cca30e7dd7 121 Gene3D G3DSA:1.10.10.10 2 112 2.7E-38 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_17400 ce76e260e5d0d001e9b7c59a4aeb7e48 127 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 75 86 - T 01-11-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DOE78_17400 ce76e260e5d0d001e9b7c59a4aeb7e48 127 Gene3D G3DSA:1.10.3830.10 7 126 4.8E-42 T 01-11-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DOE78_17400 ce76e260e5d0d001e9b7c59a4aeb7e48 127 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 5.9E-38 T 01-11-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DOE78_15715 ccafc36c7c143fac13b40f05d999d654 58 Pfam PF10782 Zinc-finger 2 58 2.2E-26 T 01-11-2018 IPR019718 Protein of unknown function DUF2602 DOE78_04280 6e2acf92cc77e1a2f6d1bd6fc1abac77 408 SUPERFAMILY SSF103473 3 392 1.44E-60 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_04280 6e2acf92cc77e1a2f6d1bd6fc1abac77 408 Gene3D G3DSA:1.20.1250.20 1 396 4.2E-55 T 01-11-2018 DOE78_04280 6e2acf92cc77e1a2f6d1bd6fc1abac77 408 Pfam PF07690 Major Facilitator Superfamily 255 399 4.3E-18 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_04280 6e2acf92cc77e1a2f6d1bd6fc1abac77 408 Pfam PF07690 Major Facilitator Superfamily 21 240 5.2E-24 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_15195 dfc1455105a59dc14e8783aee29f5957 180 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 5 177 1.5E-62 T 01-11-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 DOE78_15195 dfc1455105a59dc14e8783aee29f5957 180 Gene3D G3DSA:3.20.20.400 1 180 3.2E-67 T 01-11-2018 IPR035928 GlpP-like superfamily DOE78_15195 dfc1455105a59dc14e8783aee29f5957 180 SUPERFAMILY SSF110391 5 178 6.28E-59 T 01-11-2018 IPR035928 GlpP-like superfamily DOE78_15195 dfc1455105a59dc14e8783aee29f5957 180 PIRSF PIRSF016897 1 180 2.4E-61 T 01-11-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 DOE78_21095 a41c4b2978e25c30ab043e08fa11c5f3 246 PIRSF PIRSF021383 1 244 2.7E-72 T 01-11-2018 IPR014197 Sporulation protein YunB DOE78_21095 a41c4b2978e25c30ab043e08fa11c5f3 246 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 14 231 2.9E-53 T 01-11-2018 IPR014197 Sporulation protein YunB DOE78_21095 a41c4b2978e25c30ab043e08fa11c5f3 246 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 139 228 1.6E-30 T 01-11-2018 IPR014197 Sporulation protein YunB DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 SUPERFAMILY SSF52540 255 493 2.21E-47 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 Pfam PF00005 ABC transporter 273 426 5.1E-22 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 SMART SM00382 281 475 7.5E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 SMART SM00382 30 219 5.1E-6 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 SUPERFAMILY SSF52540 4 228 7.93E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 Gene3D G3DSA:3.40.50.300 1 245 1.0E-61 T 01-11-2018 DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 Gene3D G3DSA:3.40.50.300 246 497 3.7E-46 T 01-11-2018 DOE78_19840 6e62b049cc7838b6738781c7e4540ae6 498 Pfam PF00005 ABC transporter 21 171 1.9E-33 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_04455 9b519445c8c93139144c4ee5afc9e3c1 383 SUPERFAMILY SSF103473 7 377 3.14E-55 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_04455 9b519445c8c93139144c4ee5afc9e3c1 383 Pfam PF07690 Major Facilitator Superfamily 10 343 1.1E-40 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_04455 9b519445c8c93139144c4ee5afc9e3c1 383 Gene3D G3DSA:1.20.1250.20 3 377 2.7E-46 T 01-11-2018 DOE78_06720 766144f42860d042145086ef1e7998ba 319 SMART SM00052 18 261 2.1E-44 T 01-11-2018 IPR001633 EAL domain DOE78_06720 766144f42860d042145086ef1e7998ba 319 SUPERFAMILY SSF141868 25 257 1.06E-65 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_06720 766144f42860d042145086ef1e7998ba 319 Pfam PF00563 EAL domain 24 256 1.2E-58 T 01-11-2018 IPR001633 EAL domain DOE78_06720 766144f42860d042145086ef1e7998ba 319 Gene3D G3DSA:3.20.20.450 11 273 2.1E-66 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_13895 57602748f1f43428caf2ee7228c3b085 340 Pfam PF01757 Acyltransferase family 5 324 2.5E-22 T 01-11-2018 IPR002656 Acyltransferase 3 GO:0016747 DOE78_07225 29dd64670fb9a7774f89728070a61a32 293 Gene3D G3DSA:3.60.21.10 58 257 6.7E-24 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_07225 29dd64670fb9a7774f89728070a61a32 293 Pfam PF00149 Calcineurin-like phosphoesterase 59 225 3.0E-12 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_07225 29dd64670fb9a7774f89728070a61a32 293 SUPERFAMILY SSF56300 59 291 1.76E-37 T 01-11-2018 DOE78_21815 2bd04f3a85d004bf453a75a60d0ca481 255 Pfam PF07907 YibE/F-like protein 4 244 2.6E-74 T 01-11-2018 IPR012507 YibE/F-like DOE78_21815 2bd04f3a85d004bf453a75a60d0ca481 255 PIRSF PIRSF031503 1 255 2.0E-87 T 01-11-2018 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane DOE78_21260 1a9af3fffd89acf00d6d9068bdb34e71 374 SUPERFAMILY SSF53187 222 353 5.96E-6 T 01-11-2018 DOE78_21260 1a9af3fffd89acf00d6d9068bdb34e71 374 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 162 367 4.2E-70 T 01-11-2018 IPR010897 Sporulation stage II, protein P DOE78_21260 1a9af3fffd89acf00d6d9068bdb34e71 374 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 93 363 2.1E-73 T 01-11-2018 IPR010897 Sporulation stage II, protein P DOE78_02310 9a226ff9d7e18d9007dbda9cc633eecf 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.4E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_02310 9a226ff9d7e18d9007dbda9cc633eecf 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.4E-7 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_02310 9a226ff9d7e18d9007dbda9cc633eecf 198 SUPERFAMILY SSF46689 3 82 4.77E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02310 9a226ff9d7e18d9007dbda9cc633eecf 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 4.1E-13 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_02310 9a226ff9d7e18d9007dbda9cc633eecf 198 Gene3D G3DSA:1.10.357.10 1 196 2.5E-57 T 01-11-2018 DOE78_02310 9a226ff9d7e18d9007dbda9cc633eecf 198 SUPERFAMILY SSF48498 78 192 1.64E-20 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_22675 801199ddbafbe8f59bb417cbe2dafd7b 274 Gene3D G3DSA:2.60.120.200 24 274 7.2E-88 T 01-11-2018 DOE78_22675 801199ddbafbe8f59bb417cbe2dafd7b 274 SUPERFAMILY SSF49899 23 273 3.7E-78 T 01-11-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DOE78_22675 801199ddbafbe8f59bb417cbe2dafd7b 274 Pfam PF00722 Glycosyl hydrolases family 16 60 267 6.4E-33 T 01-11-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 DOE78_02220 d60eb5f85717910b6d3dfcea8b32fd7d 145 SUPERFAMILY SSF46785 7 141 1.3E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_02220 d60eb5f85717910b6d3dfcea8b32fd7d 145 Pfam PF01047 MarR family 46 86 3.6E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_02220 d60eb5f85717910b6d3dfcea8b32fd7d 145 SMART SM00347 30 127 1.1E-4 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_02220 d60eb5f85717910b6d3dfcea8b32fd7d 145 Gene3D G3DSA:1.10.10.10 1 145 8.9E-21 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 SUPERFAMILY SSF55073 361 517 3.06E-45 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 SUPERFAMILY SSF141868 529 777 1.7E-89 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 Pfam PF00990 Diguanylate cyclase, GGDEF domain 355 512 1.6E-49 T 01-11-2018 IPR000160 GGDEF domain DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 352 515 2.4E-42 T 01-11-2018 IPR000160 GGDEF domain DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 SMART SM00052 524 770 1.9E-114 T 01-11-2018 IPR001633 EAL domain DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 Gene3D G3DSA:3.20.20.450 528 779 1.4E-97 T 01-11-2018 IPR035919 EAL domain superfamily DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 Gene3D G3DSA:3.30.70.270 349 527 8.8E-58 T 01-11-2018 DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 SMART SM00267 344 516 4.4E-64 T 01-11-2018 IPR000160 GGDEF domain DOE78_09770 dfd259c49b9cdde2ff6478feadf4c63b 782 Pfam PF00563 EAL domain 530 765 2.0E-72 T 01-11-2018 IPR001633 EAL domain DOE78_05975 729a42c63e3432cc77ef69891bfa15f0 443 Pfam PF02378 Phosphotransferase system, EIIC 30 359 9.5E-68 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_05975 729a42c63e3432cc77ef69891bfa15f0 443 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 13 433 6.4E-174 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_05975 729a42c63e3432cc77ef69891bfa15f0 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 433 6.4E-174 T 01-11-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DOE78_05975 729a42c63e3432cc77ef69891bfa15f0 443 PIRSF PIRSF006351 1 441 6.1E-147 T 01-11-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DOE78_21045 8fd43623afb349d1d7479338575e6ff5 145 Gene3D G3DSA:1.20.120.580 1 144 1.4E-52 T 01-11-2018 IPR037038 Bsu32300-like superfamily DOE78_21045 8fd43623afb349d1d7479338575e6ff5 145 Pfam PF01934 Protein of unknown function DUF86 21 125 8.7E-19 T 01-11-2018 IPR008201 Protein of unknown function DUF86 DOE78_09555 538308a4f0e36529297b9570292943db 312 Pfam PF01032 FecCD transport family 3 306 1.5E-89 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_09555 538308a4f0e36529297b9570292943db 312 Gene3D G3DSA:1.10.3470.10 1 310 7.3E-90 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_09555 538308a4f0e36529297b9570292943db 312 SUPERFAMILY SSF81345 3 306 1.83E-79 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 SUPERFAMILY SSF53383 10 442 2.1E-125 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 Pfam PF00202 Aminotransferase class-III 22 440 1.5E-115 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 440 2.7E-169 T 01-11-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 443 53.636 T 01-11-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 PIRSF PIRSF000521 19 443 2.0E-29 T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 Gene3D G3DSA:3.40.640.10 62 338 6.2E-167 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 Gene3D G3DSA:3.90.1150.10 10 440 6.2E-167 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_13825 ab4ead55e02952d7462cb74cd7a84c08 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 01-11-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 01-11-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 SUPERFAMILY SSF51182 37 119 3.25E-13 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 Pfam PF02311 AraC-like ligand binding domain 40 105 6.6E-9 T 01-11-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 SMART SM00342 206 289 5.2E-23 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 Gene3D G3DSA:1.10.10.60 240 294 2.5E-14 T 01-11-2018 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 Pfam PF12833 Helix-turn-helix domain 212 290 1.9E-16 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 SUPERFAMILY SSF46689 242 291 3.94E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 1.9E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 1.9E-6 T 01-11-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 Gene3D G3DSA:1.10.10.60 187 239 2.7E-10 T 01-11-2018 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 SUPERFAMILY SSF46689 189 240 2.96E-6 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_11220 63bf7c6f2b20ccb7d3f40700fbc7b07d 300 Gene3D G3DSA:2.60.120.10 3 103 1.5E-11 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_10620 feb9baf9d6167830c5504772e2dbe971 272 Gene3D G3DSA:3.10.180.10 8 125 7.3E-8 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10620 feb9baf9d6167830c5504772e2dbe971 272 SUPERFAMILY SSF54593 12 172 2.82E-16 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10620 feb9baf9d6167830c5504772e2dbe971 272 SUPERFAMILY SSF54593 148 271 8.07E-11 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10620 feb9baf9d6167830c5504772e2dbe971 272 Gene3D G3DSA:3.10.180.10 146 272 3.4E-9 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_14740 40d7bad0456f9cbe41a193dc0cb56a6d 119 Pfam PF01981 Peptidyl-tRNA hydrolase PTH2 6 119 1.4E-13 T 01-11-2018 IPR002833 Peptidyl-tRNA hydrolase, PTH2 GO:0004045 MetaCyc: PWY-6308 DOE78_14740 40d7bad0456f9cbe41a193dc0cb56a6d 119 Gene3D G3DSA:3.40.1490.10 2 117 3.2E-16 T 01-11-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 DOE78_14740 40d7bad0456f9cbe41a193dc0cb56a6d 119 SUPERFAMILY SSF102462 3 119 9.42E-19 T 01-11-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 DOE78_03730 5ec115c366b5199996f8c0bbd91e830e 460 Pfam PF00246 Zinc carboxypeptidase 22 183 9.4E-10 T 01-11-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DOE78_03730 5ec115c366b5199996f8c0bbd91e830e 460 SUPERFAMILY SSF53187 12 287 2.9E-26 T 01-11-2018 DOE78_03730 5ec115c366b5199996f8c0bbd91e830e 460 Gene3D G3DSA:3.40.630.10 13 306 4.0E-24 T 01-11-2018 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 Gene3D G3DSA:1.10.150.240 16 102 1.4E-59 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 198 9.0E-13 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 SUPERFAMILY SSF56784 3 231 5.82E-45 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 92 204 5.3E-13 T 01-11-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 203 1.3E-23 T 01-11-2018 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.9E-11 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 1.9E-11 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.9E-11 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 163 1.9E-11 T 01-11-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DOE78_04295 3704697aeb2e3af9debabda315fe2361 231 Gene3D G3DSA:3.40.50.1000 5 226 1.4E-59 T 01-11-2018 IPR023214 HAD superfamily DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 SUPERFAMILY SSF53822 61 331 2.65E-80 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 Gene3D G3DSA:3.40.50.2300 161 326 8.3E-81 T 01-11-2018 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 Gene3D G3DSA:1.10.260.40 1 60 2.6E-23 T 01-11-2018 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 Gene3D G3DSA:3.40.50.2300 63 321 8.3E-81 T 01-11-2018 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.6E-19 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.6E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.6E-5 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 Pfam PF13377 Periplasmic binding protein-like domain 170 329 9.9E-40 T 01-11-2018 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 SMART SM00354 2 72 1.6E-33 T 01-11-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 SUPERFAMILY SSF47413 2 60 8.75E-18 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_14100 8b42fadd7e34f8291181aae09045d8c7 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 01-11-2018 DOE78_01010 4e98fde7a11b07f7bbd5ad208be4d1ff 206 Pfam PF13490 Putative zinc-finger 7 38 2.7E-7 T 01-11-2018 IPR027383 Putative zinc-finger DOE78_01010 4e98fde7a11b07f7bbd5ad208be4d1ff 206 Gene3D G3DSA:1.10.10.1320 9 93 7.1E-7 T 01-11-2018 DOE78_21240 8c1d04aa098e2fb141ce4c9584c1210f 351 Pfam PF01032 FecCD transport family 33 347 1.0E-94 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_21240 8c1d04aa098e2fb141ce4c9584c1210f 351 SUPERFAMILY SSF81345 17 347 4.32E-82 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_21240 8c1d04aa098e2fb141ce4c9584c1210f 351 Gene3D G3DSA:1.10.3470.10 19 351 6.5E-99 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_20540 e8daa8951d63ae3b4e1eceadcc5d1f74 239 Pfam PF02706 Chain length determinant protein 13 72 6.4E-7 T 01-11-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DOE78_00265 e7216ce09bb85d990d630954a111c7b4 292 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 2 280 3.0E-112 T 01-11-2018 IPR008764 Peptidase U57, YabG DOE78_00265 e7216ce09bb85d990d630954a111c7b4 292 PIRSF PIRSF011575 2 290 7.7E-116 T 01-11-2018 IPR008764 Peptidase U57, YabG DOE78_00265 e7216ce09bb85d990d630954a111c7b4 292 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 7 286 4.3E-136 T 01-11-2018 IPR008764 Peptidase U57, YabG DOE78_00265 e7216ce09bb85d990d630954a111c7b4 292 Pfam PF05582 YabG peptidase U57 7 285 2.3E-116 T 01-11-2018 IPR008764 Peptidase U57, YabG DOE78_12705 4d8059d6db86c06c085a1ebdfff6a5c4 103 Pfam PF13411 MerR HTH family regulatory protein 2 70 8.9E-14 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_12705 4d8059d6db86c06c085a1ebdfff6a5c4 103 Gene3D G3DSA:1.10.1660.10 1 103 5.0E-23 T 01-11-2018 DOE78_12705 4d8059d6db86c06c085a1ebdfff6a5c4 103 SUPERFAMILY SSF46955 2 102 6.23E-23 T 01-11-2018 IPR009061 Putative DNA-binding domain superfamily DOE78_12705 4d8059d6db86c06c085a1ebdfff6a5c4 103 SMART SM00422 2 72 1.2E-9 T 01-11-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DOE78_09280 d5652ff044d81f673891c47ae8b37afa 275 SUPERFAMILY SSF51658 17 271 1.96E-44 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_09280 d5652ff044d81f673891c47ae8b37afa 275 Gene3D G3DSA:3.20.20.150 9 274 3.9E-46 T 01-11-2018 DOE78_09280 d5652ff044d81f673891c47ae8b37afa 275 Pfam PF01261 Xylose isomerase-like TIM barrel 28 226 9.8E-23 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_00005 1f0439b49224bc30b701f54acbb20ade 109 Gene3D G3DSA:3.30.300.180 1 82 7.4E-33 T 01-11-2018 IPR038454 DnaA, N-terminal domain superfamily DOE78_00005 1f0439b49224bc30b701f54acbb20ade 109 Pfam PF11638 DnaA N-terminal domain 6 66 1.6E-19 T 01-11-2018 IPR024633 DnaA N-terminal domain DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 1.3E-110 T 01-11-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 2.5E-111 T 01-11-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 SUPERFAMILY SSF53613 1 286 3.27E-65 T 01-11-2018 IPR029056 Ribokinase-like DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 PIRSF PIRSF000535 1 303 2.3E-90 T 01-11-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 Pfam PF00294 pfkB family carbohydrate kinase 12 287 5.1E-57 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 Gene3D G3DSA:3.40.1190.20 1 303 3.9E-108 T 01-11-2018 IPR029056 Ribokinase-like DOE78_15095 8ceb7b0c482554e184bd9efcbbacd2ac 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 01-11-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DOE78_11115 ddb575ea713d8ce5bb9aa6f789677ace 277 SUPERFAMILY SSF161098 8 277 9.68E-69 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11115 ddb575ea713d8ce5bb9aa6f789677ace 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 264 9.0E-19 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_11115 ddb575ea713d8ce5bb9aa6f789677ace 277 Gene3D G3DSA:1.10.3720.10 2 268 2.2E-68 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12585 608a3e76af6d34bcd77d80d9b754421a 223 Gene3D G3DSA:3.90.1680.10 1 220 4.7E-74 T 01-11-2018 IPR036590 SOS response associated peptidase-like DOE78_12585 608a3e76af6d34bcd77d80d9b754421a 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 208 7.5E-72 T 01-11-2018 IPR003738 SOS response associated peptidase (SRAP) DOE78_12585 608a3e76af6d34bcd77d80d9b754421a 223 SUPERFAMILY SSF143081 2 219 1.2E-75 T 01-11-2018 IPR036590 SOS response associated peptidase-like DOE78_12900 43006c9a874abc418e125d34f11a8f0c 113 Gene3D G3DSA:1.10.3730.20 2 106 1.4E-21 T 01-11-2018 DOE78_12900 43006c9a874abc418e125d34f11a8f0c 113 Pfam PF00893 Small Multidrug Resistance protein 4 91 1.6E-18 T 01-11-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DOE78_12900 43006c9a874abc418e125d34f11a8f0c 113 SUPERFAMILY SSF103481 7 101 5.62E-13 T 01-11-2018 DOE78_08055 b140a6ed693b7006307767b44401abe0 76 Pfam PF13083 KH domain 2 74 2.4E-23 T 01-11-2018 DOE78_08055 b140a6ed693b7006307767b44401abe0 76 Gene3D G3DSA:3.30.300.20 3 61 4.4E-5 T 01-11-2018 IPR015946 K homology domain-like, alpha/beta DOE78_08055 b140a6ed693b7006307767b44401abe0 76 Hamap MF_00088 UPF0109 protein . 1 75 22.866 T 01-11-2018 IPR020627 Uncharacterised protein family UPF0109 DOE78_08055 b140a6ed693b7006307767b44401abe0 76 SUPERFAMILY SSF54814 5 58 3.53E-7 T 01-11-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DOE78_07960 36e3c8eddc181f227e2031c680608acd 212 SUPERFAMILY SSF63999 3 128 1.07E-31 T 01-11-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DOE78_07960 36e3c8eddc181f227e2031c680608acd 212 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 141 205 1.7E-15 T 01-11-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DOE78_07960 36e3c8eddc181f227e2031c680608acd 212 Gene3D G3DSA:3.40.50.10240 1 212 6.7E-73 T 01-11-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DOE78_07960 36e3c8eddc181f227e2031c680608acd 212 SUPERFAMILY SSF63862 131 211 9.42E-15 T 01-11-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DOE78_07960 36e3c8eddc181f227e2031c680608acd 212 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 24 116 3.1E-20 T 01-11-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DOE78_07960 36e3c8eddc181f227e2031c680608acd 212 SMART SM00983 140 206 2.5E-20 T 01-11-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DOE78_07960 36e3c8eddc181f227e2031c680608acd 212 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 208 3.8E-58 T 01-11-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DOE78_16565 d5058d0ba84d61c2272df9f0b180fe5c 110 Pfam PF08863 YolD-like protein 14 107 3.9E-25 T 01-11-2018 IPR014962 YolD-like protein DOE78_10810 5672b31dc36722e53145caecdde49840 219 Gene3D G3DSA:3.30.240.20 73 149 3.9E-26 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_10810 5672b31dc36722e53145caecdde49840 219 Gene3D G3DSA:3.30.240.20 163 219 3.1E-15 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_10810 5672b31dc36722e53145caecdde49840 219 Pfam PF04239 Protein of unknown function (DUF421) 83 197 4.5E-31 T 01-11-2018 IPR007353 Protein of unknown function DUF421 DOE78_13485 08d93668f6cb70db7f3667790eafdc65 78 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 78 25.364 T 01-11-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like DOE78_13485 08d93668f6cb70db7f3667790eafdc65 78 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 6 72 2.8E-25 T 01-11-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like DOE78_23715 de6723aacb5cfe7a35f375705ebcbdd6 124 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 118 1.0E-27 T 01-11-2018 DOE78_23715 de6723aacb5cfe7a35f375705ebcbdd6 124 Pfam PF03899 ATP synthase I chain 10 105 4.5E-20 T 01-11-2018 IPR005598 ATP synthase protein I DOE78_24195 a80b270e84755b0c88c0dd1dc17ee42e 86 Pfam PF05360 yiaA/B two helix domain 11 64 5.3E-15 T 01-11-2018 IPR008024 YiaAB two helix DOE78_17870 ec63e347d7ddc2e3c52232eef5f1d493 328 Pfam PF01636 Phosphotransferase enzyme family 124 243 2.4E-9 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_17870 ec63e347d7ddc2e3c52232eef5f1d493 328 SUPERFAMILY SSF56112 15 266 6.93E-20 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_17870 ec63e347d7ddc2e3c52232eef5f1d493 328 Gene3D G3DSA:3.90.1200.10 109 328 1.7E-16 T 01-11-2018 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 SUPERFAMILY SSF143548 19 137 9.55E-31 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 PIRSF PIRSF036692 1 220 8.0E-103 T 01-11-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 2.5E-96 T 01-11-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 Gene3D G3DSA:3.30.1330.90 13 80 3.3E-18 T 01-11-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 Pfam PF03315 Serine dehydratase beta chain 5 72 9.1E-12 T 01-11-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 Gene3D G3DSA:3.30.70.260 139 217 7.4E-16 T 01-11-2018 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 SUPERFAMILY SSF55021 137 216 9.51E-18 T 01-11-2018 DOE78_07985 6aeead1d64b38d6d4eab170107330468 220 Pfam PF01842 ACT domain 149 210 6.5E-11 T 01-11-2018 IPR002912 ACT domain DOE78_05800 e8ec419841f5206d6a2ee00bfe9f9257 363 Pfam PF14398 YheC/D like ATP-grasp 98 347 8.1E-63 T 01-11-2018 IPR026838 Endospore coat-associated protein YheC/D DOE78_05800 e8ec419841f5206d6a2ee00bfe9f9257 363 SUPERFAMILY SSF56059 128 329 4.6E-14 T 01-11-2018 DOE78_05800 e8ec419841f5206d6a2ee00bfe9f9257 363 Gene3D G3DSA:3.30.470.20 217 339 1.6E-5 T 01-11-2018 DOE78_09275 5fc52ee06ee22e63b64513f6c3a4ac00 276 SUPERFAMILY SSF161098 5 276 5.14E-76 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_09275 5fc52ee06ee22e63b64513f6c3a4ac00 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 269 2.4E-22 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_09275 5fc52ee06ee22e63b64513f6c3a4ac00 276 Gene3D G3DSA:1.10.3720.10 2 263 2.5E-67 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_17990 a776f3e910f9cb6804638fa4cd5ff8eb 186 Gene3D G3DSA:1.10.150.20 52 92 1.8E-6 T 01-11-2018 DOE78_17990 a776f3e910f9cb6804638fa4cd5ff8eb 186 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 178 183 - T 01-11-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DOE78_17990 a776f3e910f9cb6804638fa4cd5ff8eb 186 SUPERFAMILY SSF47781 20 95 1.08E-8 T 01-11-2018 IPR010994 RuvA domain 2-like DOE78_17990 a776f3e910f9cb6804638fa4cd5ff8eb 186 TIGRFAM TIGR00608 radc: DNA repair protein RadC 16 183 1.9E-64 T 01-11-2018 IPR001405 Uncharacterised protein family UPF0758 DOE78_17990 a776f3e910f9cb6804638fa4cd5ff8eb 186 Gene3D G3DSA:3.40.140.10 105 185 2.5E-25 T 01-11-2018 DOE78_17990 a776f3e910f9cb6804638fa4cd5ff8eb 186 Pfam PF04002 RadC-like JAB domain 108 183 2.3E-26 T 01-11-2018 IPR025657 RadC-like JAB domain DOE78_21625 ffeb6d029e5af9995701658012978163 490 Gene3D G3DSA:3.40.309.10 253 446 1.0E-187 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_21625 ffeb6d029e5af9995701658012978163 490 SUPERFAMILY SSF53720 3 479 1.7E-172 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_21625 ffeb6d029e5af9995701658012978163 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_21625 ffeb6d029e5af9995701658012978163 490 Gene3D G3DSA:3.40.605.10 11 470 1.0E-187 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_21625 ffeb6d029e5af9995701658012978163 490 Pfam PF00171 Aldehyde dehydrogenase family 12 476 6.0E-181 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_11380 4459a9aea95806b0ae772bc636d5ccb6 273 SUPERFAMILY SSF53448 7 263 6.53E-83 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_11380 4459a9aea95806b0ae772bc636d5ccb6 273 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 191 201 - T 01-11-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DOE78_11380 4459a9aea95806b0ae772bc636d5ccb6 273 Gene3D G3DSA:3.90.550.10 2 271 1.6E-91 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_11380 4459a9aea95806b0ae772bc636d5ccb6 273 Pfam PF00483 Nucleotidyl transferase 9 262 6.4E-70 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_11380 4459a9aea95806b0ae772bc636d5ccb6 273 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 100 108 - T 01-11-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 SUPERFAMILY SSF46785 10 138 5.92E-25 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 Pfam PF01047 MarR family 33 90 7.7E-11 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 SMART SM00347 26 126 2.6E-23 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.0E-6 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_24390 241a311591094fcbc0a229edcf2ae80b 142 Gene3D G3DSA:1.10.10.10 6 141 7.9E-27 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02435 aee0c9ee17733665c930fc74656a8c59 109 Pfam PF08921 Domain of unknown function (DUF1904) 2 106 9.0E-31 T 01-11-2018 IPR015017 Protein of unknown function DUF1904 DOE78_02435 aee0c9ee17733665c930fc74656a8c59 109 Gene3D G3DSA:3.30.429.10 1 108 7.4E-40 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_02435 aee0c9ee17733665c930fc74656a8c59 109 SUPERFAMILY SSF55331 2 108 1.67E-32 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_03445 fe3854a8bf4285e27b338ff59d6f4cce 74 Hamap MF_00829 UPF0435 protein . 6 73 20.868 T 01-11-2018 IPR009507 Protein of unknown function UPF0435 DOE78_03445 fe3854a8bf4285e27b338ff59d6f4cce 74 Pfam PF06569 Protein of unknown function (DUF1128) 3 73 1.3E-32 T 01-11-2018 IPR009507 Protein of unknown function UPF0435 DOE78_09690 29bdca061fbab85764e1f4b0f67eea47 282 Pfam PF00535 Glycosyl transferase family 2 21 146 5.3E-29 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09690 29bdca061fbab85764e1f4b0f67eea47 282 SUPERFAMILY SSF53448 18 254 4.5E-52 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09690 29bdca061fbab85764e1f4b0f67eea47 282 Gene3D G3DSA:3.90.550.10 6 265 2.1E-52 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_01090 c637d0f899e50a647c68e2ec5b9aa5f1 258 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 2.6E-40 T 01-11-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DOE78_16255 ef6cb125f173471b9afab1ad29d5b3ab 200 Pfam PF02517 CAAX protease self-immunity 99 180 5.2E-12 T 01-11-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 Pfam PF00119 ATP synthase A chain 20 228 9.1E-57 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 PRINTS PR00123 ATP synthase A subunit signature 162 184 3.5E-17 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 PRINTS PR00123 ATP synthase A subunit signature 215 230 3.5E-17 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 PRINTS PR00123 ATP synthase A subunit signature 78 94 3.5E-17 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 01-11-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 235 13.237 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 14 231 4.6E-48 T 01-11-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 Gene3D G3DSA:1.20.120.220 72 236 1.8E-39 T 01-11-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23710 1f3339a7cfcda74579959ffd3135692c 236 SUPERFAMILY SSF81336 70 228 6.15E-40 T 01-11-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_00085 6526debc0409c0fa89b9ce8954d16d80 293 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 3 293 53.231 T 01-11-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00085 6526debc0409c0fa89b9ce8954d16d80 293 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 8 293 3.2E-154 T 01-11-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00085 6526debc0409c0fa89b9ce8954d16d80 293 Gene3D G3DSA:3.20.20.70 1 293 1.7E-145 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_00085 6526debc0409c0fa89b9ce8954d16d80 293 ProSitePatterns PS01235 PdxS/SNZ family signature. 204 222 - T 01-11-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00085 6526debc0409c0fa89b9ce8954d16d80 293 Pfam PF01680 SOR/SNZ family 7 211 3.3E-105 T 01-11-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00085 6526debc0409c0fa89b9ce8954d16d80 293 PIRSF PIRSF029271 1 293 4.8E-151 T 01-11-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DOE78_00085 6526debc0409c0fa89b9ce8954d16d80 293 SUPERFAMILY SSF51366 17 268 7.53E-71 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_00215 ee12fe52b4e5c21c62c8e46b85d46352 269 Pfam PF04468 PSP1 C-terminal conserved region 61 146 2.6E-31 T 01-11-2018 IPR007557 PSP1, C-terminal DOE78_11740 0137191041db0528dda421d1e68a0fbb 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 264 2.6E-18 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_11740 0137191041db0528dda421d1e68a0fbb 325 Gene3D G3DSA:3.10.180.10 5 309 6.4E-107 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_11740 0137191041db0528dda421d1e68a0fbb 325 Gene3D G3DSA:3.10.180.10 66 217 6.4E-107 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_11740 0137191041db0528dda421d1e68a0fbb 325 SUPERFAMILY SSF54593 3 303 1.43E-45 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_19615 739ee64c4b723653193120090d38e70b 312 PIRSF PIRSF005355 11 309 7.1E-85 T 01-11-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 DOE78_19615 739ee64c4b723653193120090d38e70b 312 Pfam PF01040 UbiA prenyltransferase family 34 266 2.0E-36 T 01-11-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DOE78_19615 739ee64c4b723653193120090d38e70b 312 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 17 304 19.459 T 01-11-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DOE78_19615 739ee64c4b723653193120090d38e70b 312 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 26 301 1.8E-33 T 01-11-2018 DOE78_00025 4b3b50e15376f7900a64b319d517016a 74 Pfam PF04025 Domain of unknown function (DUF370) 3 73 7.5E-11 T 01-11-2018 IPR007169 Extracellular matrix regulatory protein A DOE78_22795 400d2eb45b77ee339cbce934bb159cf0 279 Pfam PF08823 Putative peptidoglycan binding domain 206 276 1.8E-10 T 01-11-2018 IPR014927 Putative peptidoglycan binding DOE78_22795 400d2eb45b77ee339cbce934bb159cf0 279 Pfam PF06267 Family of unknown function (DUF1028) 2 196 2.7E-79 T 01-11-2018 IPR010430 Protein of unknown function DUF1028 DOE78_22795 400d2eb45b77ee339cbce934bb159cf0 279 SUPERFAMILY SSF56235 1 219 4.09E-74 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_22795 400d2eb45b77ee339cbce934bb159cf0 279 Gene3D G3DSA:3.60.20.10 1 220 7.9E-83 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_10385 5a9746a18a6f5e30509f50ad5ed02bde 201 Gene3D G3DSA:3.40.50.1820 1 200 5.0E-50 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_10385 5a9746a18a6f5e30509f50ad5ed02bde 201 Pfam PF01738 Dienelactone hydrolase family 79 190 9.7E-9 T 01-11-2018 IPR002925 Dienelactone hydrolase GO:0016787 DOE78_10385 5a9746a18a6f5e30509f50ad5ed02bde 201 SUPERFAMILY SSF53474 2 200 1.21E-57 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_23500 9d74e61b71fe45e59195f1105a46b1cf 128 Pfam PF00436 Single-strand binding protein family 2 101 8.1E-31 T 01-11-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DOE78_23500 9d74e61b71fe45e59195f1105a46b1cf 128 Hamap MF_00984 Single-stranded DNA-binding protein. 2 106 30.352 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DOE78_23500 9d74e61b71fe45e59195f1105a46b1cf 128 SUPERFAMILY SSF50249 1 109 2.66E-37 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_23500 9d74e61b71fe45e59195f1105a46b1cf 128 Gene3D G3DSA:2.40.50.140 1 111 1.1E-40 T 01-11-2018 DOE78_23500 9d74e61b71fe45e59195f1105a46b1cf 128 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 110 7.6E-33 T 01-11-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DOE78_23500 9d74e61b71fe45e59195f1105a46b1cf 128 PIRSF PIRSF002070 1 119 8.9E-30 T 01-11-2018 DOE78_21605 43b4216d06c689a98dc9bb16631047cc 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 456 6.1E-156 T 01-11-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 DOE78_21605 43b4216d06c689a98dc9bb16631047cc 477 Pfam PF03553 Na+/H+ antiporter family 159 452 1.4E-58 T 01-11-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DOE78_12720 f1c2c7f169c4f96667a8375e40457675 176 SUPERFAMILY SSF55298 59 174 4.87E-19 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DOE78_12720 f1c2c7f169c4f96667a8375e40457675 176 Gene3D G3DSA:3.30.1330.40 39 176 3.3E-23 T 01-11-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DOE78_12720 f1c2c7f169c4f96667a8375e40457675 176 Pfam PF01042 Endoribonuclease L-PSP 60 174 2.3E-11 T 01-11-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DOE78_15040 fb14d44178d9422541b762ca9cbd8cc3 260 Gene3D G3DSA:3.20.20.70 1 259 5.6E-96 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_15040 fb14d44178d9422541b762ca9cbd8cc3 260 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 13 257 33.115 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_15040 fb14d44178d9422541b762ca9cbd8cc3 260 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 246 3.8E-73 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_15040 fb14d44178d9422541b762ca9cbd8cc3 260 SUPERFAMILY SSF51366 1 252 7.85E-86 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_15040 fb14d44178d9422541b762ca9cbd8cc3 260 Pfam PF00290 Tryptophan synthase alpha chain 8 251 6.6E-85 T 01-11-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_15040 fb14d44178d9422541b762ca9cbd8cc3 260 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 01-11-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DOE78_10660 f5badbf1bdf88307cee4a761c951295c 83 SMART SM00899 7 79 9.0E-19 T 01-11-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DOE78_10660 f5badbf1bdf88307cee4a761c951295c 83 Pfam PF04023 FeoA domain 9 76 5.5E-17 T 01-11-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DOE78_10660 f5badbf1bdf88307cee4a761c951295c 83 SUPERFAMILY SSF50037 11 79 2.27E-19 T 01-11-2018 IPR008988 Transcriptional repressor, C-terminal DOE78_10660 f5badbf1bdf88307cee4a761c951295c 83 Gene3D G3DSA:2.30.30.90 4 81 2.1E-23 T 01-11-2018 IPR038157 Ferrous iron transporter, core domain DOE78_17625 d161a7b7b1b4909b0b4b165d8ce347c2 46 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 40 8.1E-14 T 01-11-2018 IPR012655 Uncharacterised protein YrzI DOE78_17625 d161a7b7b1b4909b0b4b165d8ce347c2 46 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 38 4.5E-13 T 01-11-2018 IPR012655 Uncharacterised protein YrzI DOE78_04260 803b46cd22f187b52551236870a4d06e 386 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 215 369 1.1E-15 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_04260 803b46cd22f187b52551236870a4d06e 386 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 369 1.3E-52 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_04260 803b46cd22f187b52551236870a4d06e 386 Gene3D G3DSA:3.30.300.210 232 373 4.4E-6 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_00070 6cc3dd796a6d976c12021ce46b69a7c7 330 Pfam PF14175 YaaC-like Protein 23 324 2.2E-102 T 01-11-2018 IPR026988 YaaC-like protein DOE78_00370 3ff119506a1910475fdf5bfa94985a75 162 Pfam PF00575 S1 RNA binding domain 4 74 6.1E-22 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_00370 3ff119506a1910475fdf5bfa94985a75 162 SMART SM00316 4 74 1.0E-26 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_00370 3ff119506a1910475fdf5bfa94985a75 162 Gene3D G3DSA:2.40.50.140 1 84 3.2E-29 T 01-11-2018 DOE78_00370 3ff119506a1910475fdf5bfa94985a75 162 SUPERFAMILY SSF50249 4 85 6.53E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_12530 613812e4aa803032025e10862fc59758 192 ProDom PD002435 CYTOKINE DEFENSE GROWTH ANTIVIRAL REGULATION GAMMA INTERFERON IFN-GAMMA PRECURSOR GLYCOPROTEIN 24 100 0.005 T 01-11-2018 IPR002069 Interferon gamma GO:0005133|GO:0005576|GO:0006955 Reactome: R-HSA-877300|Reactome: R-HSA-877312|Reactome: R-HSA-8877330|Reactome: R-HSA-8950505 DOE78_03075 c12d2de05882f7a66fdb47d6127abbf3 143 Pfam PF14340 Domain of unknown function (DUF4395) 8 132 1.4E-30 T 01-11-2018 IPR025508 Domain of unknown function DUF4395 DOE78_03075 c12d2de05882f7a66fdb47d6127abbf3 143 PIRSF PIRSF030042 6 141 1.4E-47 T 01-11-2018 IPR016942 Uncharacterised conserved protein UCP030042 DOE78_02080 a3d6d64ae70981b91b4c61f952332736 276 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 244 42.556 T 01-11-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 DOE78_02080 a3d6d64ae70981b91b4c61f952332736 276 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 233 5.0E-64 T 01-11-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 DOE78_20485 b0e1bde2c9cd0b7b08a19dfb7f25859c 203 Pfam PF02397 Bacterial sugar transferase 2 176 1.2E-63 T 01-11-2018 IPR003362 Bacterial sugar transferase DOE78_17435 a3c73843e6a6ff486e4c73c6572c3542 328 Pfam PF12127 SigmaW regulon antibacterial 10 321 2.4E-165 T 01-11-2018 IPR022853 Uncharacterised protein family YdfA-immunity DOE78_17435 a3c73843e6a6ff486e4c73c6572c3542 328 Hamap MF_01562 UPF0365 protein . 4 324 49.486 T 01-11-2018 IPR022853 Uncharacterised protein family YdfA-immunity DOE78_03185 9698ea0429d7645ed71c66f8675b5a5b 108 Pfam PF03551 Transcriptional regulator PadR-like family 14 83 3.5E-20 T 01-11-2018 IPR005149 Transcription regulator PadR, N-terminal DOE78_03185 9698ea0429d7645ed71c66f8675b5a5b 108 SUPERFAMILY SSF46785 10 101 5.82E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_03185 9698ea0429d7645ed71c66f8675b5a5b 108 Gene3D G3DSA:1.10.10.10 2 107 5.0E-35 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_00465 eed171525230c0cea36206aae726538c 333 SUPERFAMILY SSF51395 11 318 6.04E-89 T 01-11-2018 DOE78_00465 eed171525230c0cea36206aae726538c 333 Gene3D G3DSA:3.20.20.70 7 250 1.8E-81 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_00465 eed171525230c0cea36206aae726538c 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 01-11-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DOE78_00465 eed171525230c0cea36206aae726538c 333 Gene3D G3DSA:1.10.1200.80 254 329 2.9E-18 T 01-11-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DOE78_00465 eed171525230c0cea36206aae726538c 333 Pfam PF01207 Dihydrouridine synthase (Dus) 14 315 2.8E-105 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DOE78_00465 eed171525230c0cea36206aae726538c 333 PIRSF PIRSF006621 1 331 3.3E-103 T 01-11-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DOE78_00465 eed171525230c0cea36206aae726538c 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 320 7.8E-134 T 01-11-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DOE78_07760 565e4768c8b5e6d8c167778cc211397a 312 PIRSF PIRSF018571 1 301 2.4E-86 T 01-11-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 DOE78_07760 565e4768c8b5e6d8c167778cc211397a 312 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 299 1.0E-91 T 01-11-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 DOE78_07760 565e4768c8b5e6d8c167778cc211397a 312 Pfam PF03419 Sporulation factor SpoIIGA 2 298 5.6E-82 T 01-11-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 DOE78_01065 1e16d0d11550d9e90ed51ff109ee2fa0 119 Gene3D G3DSA:3.40.250.10 18 119 4.0E-31 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01065 1e16d0d11550d9e90ed51ff109ee2fa0 119 SUPERFAMILY SSF52821 4 118 1.3E-33 T 01-11-2018 IPR036873 Rhodanese-like domain superfamily DOE78_01065 1e16d0d11550d9e90ed51ff109ee2fa0 119 Pfam PF00581 Rhodanese-like domain 31 119 1.0E-17 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_01065 1e16d0d11550d9e90ed51ff109ee2fa0 119 SMART SM00450 29 119 1.1E-24 T 01-11-2018 IPR001763 Rhodanese-like domain DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 SMART SM00893 8 197 4.1E-41 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 PIRSF PIRSF000089 4 333 3.0E-113 T 01-11-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 Gene3D G3DSA:3.40.50.620 4 205 2.4E-71 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 Pfam PF01012 Electron transfer flavoprotein domain 8 185 5.3E-41 T 01-11-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 Gene3D G3DSA:3.40.50.1220 206 338 8.3E-54 T 01-11-2018 DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 SUPERFAMILY SSF52467 208 327 2.09E-46 T 01-11-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 209 291 2.7E-34 T 01-11-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DOE78_07065 a416038ad4d551e8741d1531bb75dabc 342 SUPERFAMILY SSF52402 7 202 1.81E-51 T 01-11-2018 DOE78_09025 1260235d6960ab69a8191e2b244a06ed 328 Pfam PF07859 alpha/beta hydrolase fold 80 301 1.2E-22 T 01-11-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DOE78_09025 1260235d6960ab69a8191e2b244a06ed 328 Gene3D G3DSA:3.40.50.1820 61 323 7.2E-60 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_09025 1260235d6960ab69a8191e2b244a06ed 328 SUPERFAMILY SSF53474 49 322 7.5E-51 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_18185 a8f193189739a21d121363f21beb6020 356 Pfam PF10646 Sporulation and spore germination 73 181 4.8E-22 T 01-11-2018 IPR019606 GerMN domain DOE78_18185 a8f193189739a21d121363f21beb6020 356 Pfam PF10646 Sporulation and spore germination 219 330 1.1E-15 T 01-11-2018 IPR019606 GerMN domain DOE78_18185 a8f193189739a21d121363f21beb6020 356 SMART SM00909 247 336 5.1E-19 T 01-11-2018 IPR019606 GerMN domain DOE78_18185 a8f193189739a21d121363f21beb6020 356 SMART SM00909 96 185 7.1E-23 T 01-11-2018 IPR019606 GerMN domain DOE78_06970 3337e53f9d730a7d5c3ec2fb175c1065 116 Pfam PF13045 Protein of unknown function (DUF3905) 11 92 7.0E-45 T 01-11-2018 IPR024999 Protein of unknown function DUF3905 DOE78_13915 6164e71d6a6105bad1dca09e1c21c6f9 161 PIRSF PIRSF038931 2 156 2.4E-39 T 01-11-2018 IPR014099 Spore coat protein GerQ DOE78_13915 6164e71d6a6105bad1dca09e1c21c6f9 161 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 69 147 9.6E-35 T 01-11-2018 IPR014099 Spore coat protein GerQ DOE78_13915 6164e71d6a6105bad1dca09e1c21c6f9 161 Pfam PF09671 Spore coat protein (Spore_GerQ) 69 144 8.0E-38 T 01-11-2018 IPR014099 Spore coat protein GerQ DOE78_18710 a322af0c3c387a2dc8601055aa22485c 530 Pfam PF07508 Recombinase 181 303 7.6E-22 T 01-11-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 DOE78_18710 a322af0c3c387a2dc8601055aa22485c 530 Gene3D G3DSA:3.40.50.1390 1 138 2.2E-28 T 01-11-2018 DOE78_18710 a322af0c3c387a2dc8601055aa22485c 530 Gene3D G3DSA:1.10.10.2600 140 306 1.8E-21 T 01-11-2018 IPR038109 DNA-binding recombinase domain superfamily DOE78_18710 a322af0c3c387a2dc8601055aa22485c 530 SUPERFAMILY SSF53041 1 156 6.67E-25 T 01-11-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DOE78_18710 a322af0c3c387a2dc8601055aa22485c 530 Pfam PF00239 Resolvase, N terminal domain 3 156 1.3E-25 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DOE78_18710 a322af0c3c387a2dc8601055aa22485c 530 SMART SM00857 3 156 3.5E-32 T 01-11-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DOE78_18710 a322af0c3c387a2dc8601055aa22485c 530 Pfam PF13408 Recombinase zinc beta ribbon domain 316 380 6.6E-14 T 01-11-2018 IPR025827 Recombinase zinc beta ribbon domain DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 7 490 2.1E-173 T 01-11-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 Gene3D G3DSA:3.40.50.880 254 436 2.5E-24 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 231 1.5E-20 T 01-11-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 256 442 3.0E-54 T 01-11-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 497 169.241 T 01-11-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 SUPERFAMILY SSF52317 257 451 9.63E-38 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 SUPERFAMILY SSF52540 5 231 6.73E-51 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21310 76469aefa2458df33c1ebc058ef00d7b 514 Gene3D G3DSA:3.40.50.300 2 250 2.6E-54 T 01-11-2018 DOE78_16150 37c5facddd91de3edb8d7a7d2abb5907 202 PIRSF PIRSF036710 1 202 2.2E-46 T 01-11-2018 IPR014617 Predicted membrane protein, Bacillus YphA type DOE78_16250 7df79e62ae6e9f19ded84030be95bec5 226 Pfam PF01476 LysM domain 178 223 9.5E-10 T 01-11-2018 IPR018392 LysM domain DOE78_16250 7df79e62ae6e9f19ded84030be95bec5 226 SMART SM00257 177 223 4.2E-11 T 01-11-2018 IPR018392 LysM domain DOE78_16250 7df79e62ae6e9f19ded84030be95bec5 226 SUPERFAMILY SSF54106 176 223 8.76E-8 T 01-11-2018 DOE78_16250 7df79e62ae6e9f19ded84030be95bec5 226 Gene3D G3DSA:3.10.350.10 161 226 2.6E-13 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_22980 768a4a1c50439441d95174dc52a16bce 338 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 95 243 7.7E-53 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_22980 768a4a1c50439441d95174dc52a16bce 338 Gene3D G3DSA:1.10.260.150 74 333 1.6E-92 T 01-11-2018 DOE78_22980 768a4a1c50439441d95174dc52a16bce 338 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 96 243 5.2E-52 T 01-11-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DOE78_02025 7805c4b1c62a64cc10a839d36f3083ef 162 SUPERFAMILY SSF51905 100 161 1.87E-16 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_02025 7805c4b1c62a64cc10a839d36f3083ef 162 Pfam PF05199 GMC oxidoreductase 33 154 4.9E-22 T 01-11-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DOE78_02025 7805c4b1c62a64cc10a839d36f3083ef 162 SUPERFAMILY SSF54373 17 104 1.84E-19 T 01-11-2018 DOE78_02025 7805c4b1c62a64cc10a839d36f3083ef 162 Gene3D G3DSA:3.50.50.60 90 162 3.2E-17 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_15310 de9032ba029cf35403a54ab873d48ff0 323 Gene3D G3DSA:2.130.10.10 27 262 8.5E-16 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DOE78_15310 de9032ba029cf35403a54ab873d48ff0 323 SUPERFAMILY SSF51004 32 318 1.05E-25 T 01-11-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DOE78_02045 4f35d90615117066d2354047594d2c13 450 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 435 3.2E-50 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 SMART SM00829 21 344 8.6E-6 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 SUPERFAMILY SSF50129 21 179 2.74E-44 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 SUPERFAMILY SSF51735 144 337 9.49E-35 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 Gene3D G3DSA:3.40.50.720 158 294 1.0E-94 T 01-11-2018 DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 Gene3D G3DSA:3.90.180.10 32 336 1.0E-94 T 01-11-2018 DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 Pfam PF00107 Zinc-binding dehydrogenase 180 309 2.8E-23 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_11660 8dfc38de825f5c33050fd1456fa0b052 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 140 3.6E-26 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_16790 fe270a75d3fa4ab74431a94783de7f9c 83 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 76 1.0E-22 T 01-11-2018 IPR020138 Uncharacterised protein family YqzF DOE78_16790 fe270a75d3fa4ab74431a94783de7f9c 83 Pfam PF11118 Protein of unknown function (DUF2627) 3 76 2.4E-35 T 01-11-2018 IPR020138 Uncharacterised protein family YqzF DOE78_22175 5f1d84c6e3803f8433c2c3f17d68ca98 211 SUPERFAMILY SSF52317 2 204 2.22E-57 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_22175 5f1d84c6e3803f8433c2c3f17d68ca98 211 Gene3D G3DSA:3.40.50.880 1 211 1.7E-75 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_22175 5f1d84c6e3803f8433c2c3f17d68ca98 211 PIRSF PIRSF000495 1 207 2.2E-75 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DOE78_22175 5f1d84c6e3803f8433c2c3f17d68ca98 211 Pfam PF00117 Glutamine amidotransferase class-I 34 201 1.1E-22 T 01-11-2018 IPR017926 Glutamine amidotransferase DOE78_22175 5f1d84c6e3803f8433c2c3f17d68ca98 211 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 37.833 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DOE78_22175 5f1d84c6e3803f8433c2c3f17d68ca98 211 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 8.9E-74 T 01-11-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DOE78_22740 c473894257591837341eb9456e8de213 517 ProSitePatterns PS01303 BCCT family of transporters signature. 311 320 - T 01-11-2018 IPR018093 BCCT transporter, conserved site DOE78_22740 c473894257591837341eb9456e8de213 517 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 47 493 2.3E-166 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DOE78_22740 c473894257591837341eb9456e8de213 517 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 9 493 1.0E-198 T 01-11-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DOE78_02385 af66c6adea15a47f70c221ebed62c996 399 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 392 3.2E-101 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_02385 af66c6adea15a47f70c221ebed62c996 399 Gene3D G3DSA:3.30.300.210 242 393 9.7E-39 T 01-11-2018 IPR038501 Spore germination GerAC superfamily DOE78_02385 af66c6adea15a47f70c221ebed62c996 399 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 227 391 5.6E-39 T 01-11-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DOE78_16245 f8e44af28dd0f636ada5d86bbbe91583 152 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 108 150 4.0E-11 T 01-11-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane DOE78_16245 f8e44af28dd0f636ada5d86bbbe91583 152 Pfam PF10864 Protein of unknown function (DUF2663) 19 150 2.0E-47 T 01-11-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane DOE78_03720 81abee1c35b137ea6b8132bf7e6f8874 337 Gene3D G3DSA:1.10.3470.10 9 335 1.1E-90 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_03720 81abee1c35b137ea6b8132bf7e6f8874 337 Pfam PF01032 FecCD transport family 22 331 2.9E-87 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_03720 81abee1c35b137ea6b8132bf7e6f8874 337 SUPERFAMILY SSF81345 4 330 1.44E-80 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 4.0E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 4.0E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 4.0E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 4.0E-12 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 SMART SM00347 25 125 1.9E-23 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 Gene3D G3DSA:1.10.10.10 5 141 3.1E-28 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 Pfam PF01047 MarR family 32 89 5.6E-16 T 01-11-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DOE78_12510 e458e76ad091ebbafaadf1b666eea22c 142 SUPERFAMILY SSF46785 10 140 2.16E-26 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_08900 a30f2092ffde320aac370dab5dddd1ab 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.625 T 01-11-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DOE78_08900 a30f2092ffde320aac370dab5dddd1ab 104 Gene3D G3DSA:3.30.70.100 1 97 2.8E-37 T 01-11-2018 DOE78_08900 a30f2092ffde320aac370dab5dddd1ab 104 Pfam PF05336 L-rhamnose mutarotase 3 103 4.0E-29 T 01-11-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 DOE78_08900 a30f2092ffde320aac370dab5dddd1ab 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 104 1.9E-54 T 01-11-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DOE78_08900 a30f2092ffde320aac370dab5dddd1ab 104 SUPERFAMILY SSF54909 1 104 1.9E-37 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_21440 62312ad0e0dad207d15c02b39847968c 426 Gene3D G3DSA:3.40.190.10 53 352 5.7E-73 T 01-11-2018 DOE78_21440 62312ad0e0dad207d15c02b39847968c 426 SUPERFAMILY SSF53850 19 423 3.07E-52 T 01-11-2018 DOE78_21440 62312ad0e0dad207d15c02b39847968c 426 Pfam PF13416 Bacterial extracellular solute-binding protein 50 359 4.6E-33 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_21440 62312ad0e0dad207d15c02b39847968c 426 Gene3D G3DSA:3.40.190.10 148 406 5.7E-73 T 01-11-2018 DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 Gene3D G3DSA:3.30.465.10 58 174 2.8E-35 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 Gene3D G3DSA:3.30.390.50 178 288 4.4E-34 T 01-11-2018 DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 175 8.3E-45 T 01-11-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 Gene3D G3DSA:3.30.43.10 1 57 7.1E-24 T 01-11-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 SUPERFAMILY SSF56176 3 174 5.45E-49 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 SMART SM01092 181 283 1.8E-25 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 182 283 8.9E-25 T 01-11-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DOE78_11800 462ec75c6a1a2e39ecd238117a66f6bd 289 SUPERFAMILY SSF55447 180 283 7.85E-27 T 01-11-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DOE78_11095 36309b86535f071ca31187dca275f6b4 165 SUPERFAMILY SSF109854 27 155 1.14E-19 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_11095 36309b86535f071ca31187dca275f6b4 165 Gene3D G3DSA:1.20.120.450 19 160 1.4E-17 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_11095 36309b86535f071ca31187dca275f6b4 165 Pfam PF12867 DinB superfamily 26 149 5.1E-14 T 01-11-2018 IPR024775 DinB-like domain DOE78_20630 023651bb5ecc48f724993ae763ae4a69 234 Pfam PF03741 Integral membrane protein TerC family 10 179 6.5E-45 T 01-11-2018 IPR005496 Integral membrane protein TerC GO:0016021 DOE78_20630 023651bb5ecc48f724993ae763ae4a69 234 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 8 180 2.8E-69 T 01-11-2018 IPR022301 Integral membrane protein YjbE DOE78_17015 7a7fb48f076b0ea8ba68312e7c1ef8a4 448 Gene3D G3DSA:3.40.640.10 84 349 7.2E-166 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_17015 7a7fb48f076b0ea8ba68312e7c1ef8a4 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 49.757 T 01-11-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 DOE78_17015 7a7fb48f076b0ea8ba68312e7c1ef8a4 448 SUPERFAMILY SSF53383 3 443 4.03E-119 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_17015 7a7fb48f076b0ea8ba68312e7c1ef8a4 448 Pfam PF02347 Glycine cleavage system P-protein 3 439 3.0E-161 T 01-11-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DOE78_17015 7a7fb48f076b0ea8ba68312e7c1ef8a4 448 Gene3D G3DSA:3.90.1150.10 73 442 7.2E-166 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_17015 7a7fb48f076b0ea8ba68312e7c1ef8a4 448 PIRSF PIRSF006815 3 447 3.9E-188 T 01-11-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 DOE78_11615 560ab52ab89e10850bfd932f47e22b26 235 Gene3D G3DSA:3.60.10.10 1 234 4.2E-21 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE78_11615 560ab52ab89e10850bfd932f47e22b26 235 SUPERFAMILY SSF56219 1 231 8.9E-21 T 01-11-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DOE78_22960 5edf65bcbe4a66200b07725f49589e60 42 Gene3D G3DSA:1.10.287.1100 4 37 8.5E-8 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_22960 5edf65bcbe4a66200b07725f49589e60 42 SUPERFAMILY SSF100985 4 39 1.83E-7 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_22960 5edf65bcbe4a66200b07725f49589e60 42 Pfam PF08970 Sporulation inhibitor A 4 40 3.0E-10 T 01-11-2018 IPR015064 Sporulation inhibitor A DOE78_18960 30c0e2a6cd32502b2e42adc4b3ad53c2 245 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 26 242 2.9E-54 T 01-11-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 DOE78_18960 30c0e2a6cd32502b2e42adc4b3ad53c2 245 Pfam PF02511 Thymidylate synthase complementing protein 34 238 1.5E-49 T 01-11-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 DOE78_18960 30c0e2a6cd32502b2e42adc4b3ad53c2 245 Gene3D G3DSA:3.30.1360.170 32 244 7.1E-51 T 01-11-2018 DOE78_18960 30c0e2a6cd32502b2e42adc4b3ad53c2 245 SUPERFAMILY SSF69796 32 244 2.88E-43 T 01-11-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 DOE78_07235 35d3247649de189009b9ebfebe1aa120 220 PIRSF PIRSF032442 16 220 5.1E-66 T 01-11-2018 IPR016997 Uncharacterised conserved protein UCP032442 DOE78_07235 35d3247649de189009b9ebfebe1aa120 220 Gene3D G3DSA:3.90.70.10 23 220 7.6E-64 T 01-11-2018 DOE78_07235 35d3247649de189009b9ebfebe1aa120 220 Pfam PF13529 Peptidase_C39 like family 28 191 5.3E-34 T 01-11-2018 IPR039564 Peptidase C39-like DOE78_17055 068351813db2417058fe1e4e3070eeb1 144 PIRSF PIRSF021292 1 144 2.4E-33 T 01-11-2018 IPR016785 ComG operon protein 4 GO:0030420 DOE78_17055 068351813db2417058fe1e4e3070eeb1 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 1.0E-4 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_17055 068351813db2417058fe1e4e3070eeb1 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 9.2E-5 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_07650 a315bc6ee334ddf3ccbcee8aeb8ffabc 511 SUPERFAMILY SSF52096 213 491 7.68E-81 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_07650 a315bc6ee334ddf3ccbcee8aeb8ffabc 511 Gene3D G3DSA:3.90.226.10 254 509 1.6E-83 T 01-11-2018 DOE78_07650 a315bc6ee334ddf3ccbcee8aeb8ffabc 511 Gene3D G3DSA:3.90.226.10 2 248 1.1E-75 T 01-11-2018 DOE78_07650 a315bc6ee334ddf3ccbcee8aeb8ffabc 511 SUPERFAMILY SSF52096 7 246 7.76E-63 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_07650 a315bc6ee334ddf3ccbcee8aeb8ffabc 511 Pfam PF01039 Carboxyl transferase domain 31 507 8.5E-155 T 01-11-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DOE78_12225 e9fa855179d7311cdfc8baef2f4249ca 205 Pfam PF04854 Protein of unknown function, DUF624 21 93 2.8E-21 T 01-11-2018 IPR006938 Protein of unknown function DUF624 DOE78_08240 7111eb62d6110d898a4719143d2e8ab8 225 Pfam PF04347 Flagellar biosynthesis protein, FliO 95 201 2.4E-12 T 01-11-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DOE78_16380 049931cd3ec217d9fcc45f694fadbc63 174 SUPERFAMILY SSF140663 2 125 3.01E-27 T 01-11-2018 IPR023203 TTHA0068-like superfamily DOE78_16380 049931cd3ec217d9fcc45f694fadbc63 174 Gene3D G3DSA:1.20.58.500 4 100 6.7E-15 T 01-11-2018 DOE78_16380 049931cd3ec217d9fcc45f694fadbc63 174 Pfam PF03745 Domain of unknown function (DUF309) 7 65 6.4E-19 T 01-11-2018 IPR005500 Protein of unknown function DUF309 DOE78_23640 32784c60174e624d8bddc7b08b88a5aa 173 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 21 161 1.5E-36 T 01-11-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23640 32784c60174e624d8bddc7b08b88a5aa 173 Gene3D G3DSA:1.20.120.1200 7 165 2.8E-40 T 01-11-2018 DOE78_04160 bd6be9a36bc2f6156e43ae86df11acf0 373 Gene3D G3DSA:3.40.50.2300 40 345 3.5E-118 T 01-11-2018 DOE78_04160 bd6be9a36bc2f6156e43ae86df11acf0 373 Pfam PF13407 Periplasmic binding protein domain 40 325 2.9E-56 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_04160 bd6be9a36bc2f6156e43ae86df11acf0 373 Gene3D G3DSA:3.40.50.2300 142 366 3.5E-118 T 01-11-2018 DOE78_04160 bd6be9a36bc2f6156e43ae86df11acf0 373 SUPERFAMILY SSF53822 37 356 1.81E-52 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_19460 e19db514c8c2e260dee9c7668a0562a9 288 Gene3D G3DSA:3.90.70.10 87 288 8.6E-70 T 01-11-2018 DOE78_19460 e19db514c8c2e260dee9c7668a0562a9 288 Pfam PF13529 Peptidase_C39 like family 92 257 7.7E-36 T 01-11-2018 IPR039564 Peptidase C39-like DOE78_15015 17d98550817dc08ae2d7ab94bb23adae 600 PIRSF PIRSF006425 155 300 0.17 T 01-11-2018 IPR014441 Uncharacterised conserved protein UCP006425, beta-propeller-type DOE78_15015 17d98550817dc08ae2d7ab94bb23adae 600 PIRSF PIRSF006425 286 600 2.8E-63 T 01-11-2018 IPR014441 Uncharacterised conserved protein UCP006425, beta-propeller-type DOE78_15015 17d98550817dc08ae2d7ab94bb23adae 600 PIRSF PIRSF006425 5 154 4.3E-11 T 01-11-2018 IPR014441 Uncharacterised conserved protein UCP006425, beta-propeller-type DOE78_15015 17d98550817dc08ae2d7ab94bb23adae 600 Pfam PF09826 Beta propeller domain 64 590 1.7E-171 T 01-11-2018 IPR019198 Beta propeller domain-containing family DOE78_12395 3b217b5b72ac4264d39eb1ce958ad4c0 368 Pfam PF14031 Putative serine dehydratase domain 256 350 7.7E-18 T 01-11-2018 IPR026956 D-serine dehydratase-like domain DOE78_12395 3b217b5b72ac4264d39eb1ce958ad4c0 368 SMART SM01119 256 351 6.0E-30 T 01-11-2018 IPR026956 D-serine dehydratase-like domain DOE78_12395 3b217b5b72ac4264d39eb1ce958ad4c0 368 SUPERFAMILY SSF51419 14 246 6.98E-39 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_12395 3b217b5b72ac4264d39eb1ce958ad4c0 368 Pfam PF01168 Alanine racemase, N-terminal domain 15 240 4.1E-30 T 01-11-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DOE78_12395 3b217b5b72ac4264d39eb1ce958ad4c0 368 Gene3D G3DSA:2.40.37.20 6 359 2.3E-109 T 01-11-2018 DOE78_12395 3b217b5b72ac4264d39eb1ce958ad4c0 368 Gene3D G3DSA:3.20.20.10 16 238 2.3E-109 T 01-11-2018 IPR029066 PLP-binding barrel DOE78_10785 8a747594a353bcc0cc1353c7e1132a9a 140 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 2 139 42.777 T 01-11-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 DOE78_10785 8a747594a353bcc0cc1353c7e1132a9a 140 SUPERFAMILY SSF54593 3 130 3.09E-28 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10785 8a747594a353bcc0cc1353c7e1132a9a 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 1.3E-14 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_10785 8a747594a353bcc0cc1353c7e1132a9a 140 Gene3D G3DSA:3.10.180.10 1 136 1.1E-41 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_05095 90528788509badad2721c83d0cf3b0b8 774 SUPERFAMILY SSF55486 237 405 2.94E-18 T 01-11-2018 DOE78_05095 90528788509badad2721c83d0cf3b0b8 774 Pfam PF05547 Immune inhibitor A peptidase M6 125 769 1.4E-251 T 01-11-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 DOE78_05095 90528788509badad2721c83d0cf3b0b8 774 PIRSF PIRSF007519 2 773 1.4E-275 T 01-11-2018 IPR012300 Peptidase M6, InhA DOE78_05095 90528788509badad2721c83d0cf3b0b8 774 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 149 466 7.1E-82 T 01-11-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 DOE78_16985 306fd2bba649dbfceecd2b51f97398de 341 Gene3D G3DSA:3.80.30.30 115 341 2.1E-92 T 01-11-2018 DOE78_16985 306fd2bba649dbfceecd2b51f97398de 341 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 4 341 1.6E-157 T 01-11-2018 IPR023897 Spore photoproduct lyase GO:0003913 DOE78_16985 306fd2bba649dbfceecd2b51f97398de 341 SUPERFAMILY SSF102114 84 255 5.1E-5 T 01-11-2018 DOE78_16985 306fd2bba649dbfceecd2b51f97398de 341 Gene3D G3DSA:3.40.50.12110 2 114 2.1E-46 T 01-11-2018 DOE78_12410 5d39096a9692d8548a7f53f03f61caaf 138 Pfam PF02082 Transcriptional regulator 2 79 5.6E-20 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_12410 5d39096a9692d8548a7f53f03f61caaf 138 SUPERFAMILY SSF46785 2 131 1.94E-27 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_12410 5d39096a9692d8548a7f53f03f61caaf 138 Gene3D G3DSA:1.10.10.10 1 138 3.8E-41 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02985 08ee04b18f445d87752cf5e4eee59358 73 Pfam PF07872 Protein of unknown function (DUF1659) 7 50 2.7E-13 T 01-11-2018 IPR012454 Protein of unknown function DUF1659 DOE78_17260 d990a62adbfb805f948aae2119710450 118 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 36 110 2.0E-9 T 01-11-2018 IPR020506 Uncharacterised protein family YqfZ DOE78_04115 75ce101a08c70babf8afe755995f1750 279 Pfam PF14501 GHKL domain 168 274 1.3E-20 T 01-11-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain DOE78_04115 75ce101a08c70babf8afe755995f1750 279 SMART SM00387 167 278 7.7E-4 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_04115 75ce101a08c70babf8afe755995f1750 279 Gene3D G3DSA:3.30.565.10 122 274 8.8E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_04115 75ce101a08c70babf8afe755995f1750 279 SUPERFAMILY SSF55874 134 262 3.31E-12 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_04115 75ce101a08c70babf8afe755995f1750 279 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 73 130 5.4E-11 T 01-11-2018 IPR039506 SpoOB, alpha-helical domain DOE78_02765 11c35f5a3e5f8ec4727202ceb9debb64 294 SUPERFAMILY SSF161098 11 294 1.14E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02765 11c35f5a3e5f8ec4727202ceb9debb64 294 Gene3D G3DSA:1.10.3720.10 4 285 4.5E-69 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02765 11c35f5a3e5f8ec4727202ceb9debb64 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 287 4.4E-12 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_04250 c24a1259b52e63692fb515abd88d03ec 376 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 363 5.2E-51 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_04250 c24a1259b52e63692fb515abd88d03ec 376 Pfam PF03845 Spore germination protein 17 289 1.3E-28 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_20825 9c7ce8aeb8584c2dc4c05cf26794be62 207 SMART SM00479 6 184 1.8E-26 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_20825 9c7ce8aeb8584c2dc4c05cf26794be62 207 Pfam PF00929 Exonuclease 8 175 4.2E-21 T 01-11-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DOE78_20825 9c7ce8aeb8584c2dc4c05cf26794be62 207 SUPERFAMILY SSF53098 6 181 2.94E-28 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_20825 9c7ce8aeb8584c2dc4c05cf26794be62 207 Gene3D G3DSA:3.30.420.10 2 201 1.8E-38 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 SUPERFAMILY SSF51735 4 168 1.55E-57 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 2.3E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 2.3E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.3E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 2.3E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 2.3E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 2.3E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 2.3E-51 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 Gene3D G3DSA:3.40.50.720 1 170 1.1E-73 T 01-11-2018 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 01-11-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.4E-74 T 01-11-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 SUPERFAMILY SSF56327 173 438 1.58E-97 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 Gene3D G3DSA:3.90.110.10 171 442 2.2E-106 T 01-11-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DOE78_21535 a8191ed2b8580acd5e17a89958ab2a2f 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 3.6E-51 T 01-11-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DOE78_09040 162f539ac6de945baf4dbf0de7f943ad 522 Gene3D G3DSA:3.30.300.310 415 518 1.2E-31 T 01-11-2018 DOE78_09040 162f539ac6de945baf4dbf0de7f943ad 522 SUPERFAMILY SSF56801 9 515 9.55E-153 T 01-11-2018 DOE78_09040 162f539ac6de945baf4dbf0de7f943ad 522 Pfam PF00501 AMP-binding enzyme 18 419 6.8E-110 T 01-11-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DOE78_09040 162f539ac6de945baf4dbf0de7f943ad 522 Gene3D G3DSA:3.40.50.12780 4 414 1.2E-120 T 01-11-2018 DOE78_09040 162f539ac6de945baf4dbf0de7f943ad 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 503 3.6E-19 T 01-11-2018 IPR025110 AMP-binding enzyme, C-terminal domain DOE78_09040 162f539ac6de945baf4dbf0de7f943ad 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 01-11-2018 IPR020845 AMP-binding, conserved site DOE78_05870 a137e051680920221356b3dc654ec20b 289 Pfam PF13616 PPIC-type PPIASE domain 139 230 7.8E-28 T 01-11-2018 DOE78_05870 a137e051680920221356b3dc654ec20b 289 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 284 21.915 T 01-11-2018 IPR023059 Foldase protein PrsA GO:0003755 DOE78_05870 a137e051680920221356b3dc654ec20b 289 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 167 188 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DOE78_05870 a137e051680920221356b3dc654ec20b 289 SUPERFAMILY SSF109998 35 168 5.1E-17 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily DOE78_05870 a137e051680920221356b3dc654ec20b 289 SUPERFAMILY SSF54534 126 228 3.21E-34 T 01-11-2018 DOE78_05870 a137e051680920221356b3dc654ec20b 289 Gene3D G3DSA:1.10.4030.30 55 250 1.9E-38 T 01-11-2018 DOE78_05870 a137e051680920221356b3dc654ec20b 289 Gene3D G3DSA:3.10.50.40 139 230 1.9E-38 T 01-11-2018 DOE78_07270 80b13e51391e42f75ffb4328b01f20ba 147 Pfam PF00571 CBS domain 86 138 0.0058 T 01-11-2018 IPR000644 CBS domain DOE78_07270 80b13e51391e42f75ffb4328b01f20ba 147 SUPERFAMILY SSF54631 12 139 2.59E-26 T 01-11-2018 DOE78_07270 80b13e51391e42f75ffb4328b01f20ba 147 Gene3D G3DSA:3.10.580.10 1 147 1.7E-55 T 01-11-2018 DOE78_01635 7e591eb7c13977628b697dbddec42093 272 SUPERFAMILY SSF52540 4 250 1.17E-61 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_01635 7e591eb7c13977628b697dbddec42093 272 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_01635 7e591eb7c13977628b697dbddec42093 272 Gene3D G3DSA:3.40.50.300 1 271 9.0E-72 T 01-11-2018 DOE78_01635 7e591eb7c13977628b697dbddec42093 272 SMART SM00382 37 229 9.9E-9 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01635 7e591eb7c13977628b697dbddec42093 272 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 265 4.3E-103 T 01-11-2018 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 DOE78_01635 7e591eb7c13977628b697dbddec42093 272 Pfam PF00005 ABC transporter 28 178 1.4E-32 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_07470 3065e71351dcd2d2f0896617e608db7d 312 Hamap MF_01664 Heme A synthase [ctaA]. 1 302 31.237 T 01-11-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 DOE78_07470 3065e71351dcd2d2f0896617e608db7d 312 Pfam PF02628 Cytochrome oxidase assembly protein 55 287 3.3E-31 T 01-11-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DOE78_12635 ea36f780d5c89b83bfc5d53100e639ce 108 Gene3D G3DSA:3.30.70.100 10 101 7.5E-39 T 01-11-2018 DOE78_12635 ea36f780d5c89b83bfc5d53100e639ce 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 28 82 5.4E-6 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE78_12635 ea36f780d5c89b83bfc5d53100e639ce 108 SUPERFAMILY SSF54909 4 104 4.98E-32 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_21215 2f769d4d03f8b3b591ae44e9bead1435 43 Pfam PF14115 YuzL-like protein 3 43 4.8E-23 T 01-11-2018 IPR025625 YuzL-like protein DOE78_10200 6f371817eee242cd5becc2fb8d90613a 179 SUPERFAMILY SSF109854 6 167 4.58E-35 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_10200 6f371817eee242cd5becc2fb8d90613a 179 Pfam PF12867 DinB superfamily 35 164 1.3E-18 T 01-11-2018 IPR024775 DinB-like domain DOE78_10200 6f371817eee242cd5becc2fb8d90613a 179 Gene3D G3DSA:1.20.120.450 23 169 2.9E-33 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_07420 e39c1131d2bcc1574a73b30bf6fa261b 106 Pfam PF14036 YlaH-like protein 20 93 2.6E-27 T 01-11-2018 IPR025620 YlaH-like protein DOE78_24075 40d01f4023a2a2fd631b0d6559737da9 339 Pfam PF12698 ABC-2 family transporter protein 20 330 2.3E-40 T 01-11-2018 DOE78_18670 b788d31942242657326e627421e25079 264 Pfam PF02811 PHP domain 4 158 4.2E-13 T 01-11-2018 IPR004013 PHP domain GO:0003824 DOE78_18670 b788d31942242657326e627421e25079 264 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 3 261 1.9E-66 T 01-11-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 DOE78_18670 b788d31942242657326e627421e25079 264 SUPERFAMILY SSF89550 1 254 7.06E-33 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DOE78_18670 b788d31942242657326e627421e25079 264 Gene3D G3DSA:3.20.20.140 3 264 9.1E-64 T 01-11-2018 DOE78_01965 b6f46f53ca04471bc75e91c388638a1c 485 Pfam PF01425 Amidase 24 465 2.2E-165 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_01965 b6f46f53ca04471bc75e91c388638a1c 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 3.3E-207 T 01-11-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_01965 b6f46f53ca04471bc75e91c388638a1c 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 01-11-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DOE78_01965 b6f46f53ca04471bc75e91c388638a1c 485 Gene3D G3DSA:3.90.1300.10 2 484 1.6E-204 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_01965 b6f46f53ca04471bc75e91c388638a1c 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 97.776 T 01-11-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_01965 b6f46f53ca04471bc75e91c388638a1c 485 SUPERFAMILY SSF75304 1 483 3.01E-170 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_03925 687c9d25fbc02e04591139a6e2adb193 777 Gene3D G3DSA:3.40.50.300 175 355 3.9E-16 T 01-11-2018 DOE78_03925 687c9d25fbc02e04591139a6e2adb193 777 Gene3D G3DSA:3.30.950.30 2 152 1.3E-15 T 01-11-2018 IPR038461 Schlafen, AAA domain superfamily DOE78_03925 687c9d25fbc02e04591139a6e2adb193 777 SUPERFAMILY SSF52540 178 430 2.07E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03925 687c9d25fbc02e04591139a6e2adb193 777 Pfam PF00931 NB-ARC domain 195 417 2.3E-11 T 01-11-2018 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6798695|Reactome: R-HSA-6803207|Reactome: R-HSA-8953750 DOE78_06575 876df354cb1da9b5ca08667720213299 305 SUPERFAMILY SSF161098 97 277 2.49E-20 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06575 876df354cb1da9b5ca08667720213299 305 Gene3D G3DSA:1.10.3720.10 93 297 1.3E-15 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06575 876df354cb1da9b5ca08667720213299 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 59 1.3E-11 T 01-11-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DOE78_06575 876df354cb1da9b5ca08667720213299 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 302 6.2E-28 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_22920 f1b966e623f13b707e87bf8fc5ef7230 516 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 452 509 2.9E-14 T 01-11-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DOE78_22920 f1b966e623f13b707e87bf8fc5ef7230 516 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 509 7.5E-108 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DOE78_22920 f1b966e623f13b707e87bf8fc5ef7230 516 SUPERFAMILY SSF64518 161 509 5.1E-15 T 01-11-2018 DOE78_22920 f1b966e623f13b707e87bf8fc5ef7230 516 Pfam PF00460 Flagella basal body rod protein 8 38 2.3E-8 T 01-11-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DOE78_22920 f1b966e623f13b707e87bf8fc5ef7230 516 PRINTS PR01005 Flagellar hook-associated protein signature 167 191 3.9E-5 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DOE78_22920 f1b966e623f13b707e87bf8fc5ef7230 516 PRINTS PR01005 Flagellar hook-associated protein signature 134 154 3.9E-5 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DOE78_22920 f1b966e623f13b707e87bf8fc5ef7230 516 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 3.9E-5 T 01-11-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DOE78_02305 ab945adae793578329ce9160f71db98d 274 Gene3D G3DSA:3.40.50.1820 1 274 1.2E-51 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_02305 ab945adae793578329ce9160f71db98d 274 SUPERFAMILY SSF53474 3 273 1.88E-50 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00412 Epoxide hydrolase signature 214 230 5.3E-17 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00412 Epoxide hydrolase signature 94 107 5.3E-17 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00412 Epoxide hydrolase signature 248 270 5.3E-17 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00412 Epoxide hydrolase signature 50 65 5.3E-17 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00412 Epoxide hydrolase signature 30 48 5.3E-17 T 01-11-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DOE78_02305 ab945adae793578329ce9160f71db98d 274 Pfam PF12697 Alpha/beta hydrolase family 26 264 7.0E-19 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 1.2E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 1.2E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_02305 ab945adae793578329ce9160f71db98d 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 1.2E-6 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_20890 68539d17ca75f499fd1d38f7db1d1d18 204 Pfam PF09335 SNARE associated Golgi protein 31 156 2.0E-15 T 01-11-2018 IPR032816 SNARE associated Golgi protein DOE78_13225 195da387c0980290db2b2641eab4df08 294 Pfam PF00795 Carbon-nitrogen hydrolase 22 274 6.8E-58 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DOE78_13225 195da387c0980290db2b2641eab4df08 294 Gene3D G3DSA:3.60.110.10 2 294 2.7E-107 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_13225 195da387c0980290db2b2641eab4df08 294 SUPERFAMILY SSF56317 4 290 1.29E-75 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 SMART SM00028 339 372 130.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 SMART SM00028 170 204 30.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 SMART SM00028 271 304 120.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 SMART SM00028 237 270 44.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 SMART SM00028 134 167 63.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 SMART SM00028 66 99 63.0 T 01-11-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 Pfam PF14559 Tetratricopeptide repeat 48 108 2.2E-8 T 01-11-2018 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 Pfam PF13432 Tetratricopeptide repeat 138 197 3.5E-5 T 01-11-2018 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 Pfam PF13432 Tetratricopeptide repeat 279 322 0.0092 T 01-11-2018 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 Gene3D G3DSA:1.25.40.10 200 416 6.1E-22 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 Gene3D G3DSA:1.25.40.10 4 199 2.0E-27 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_16035 831866e0c26a11ebb59bd78c17858836 420 SUPERFAMILY SSF48452 37 365 3.04E-24 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 Gene3D G3DSA:3.40.710.10 18 278 9.6E-90 T 01-11-2018 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 279 370 2.1E-19 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 Gene3D G3DSA:2.60.410.10 279 370 2.0E-20 T 01-11-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 SUPERFAMILY SSF69189 271 368 6.47E-20 T 01-11-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 259 1.1E-86 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 SUPERFAMILY SSF56601 1 279 6.12E-79 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 5.3E-17 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 5.3E-17 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 5.3E-17 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_16430 2602ef95a491f4b04ea8424a39df64f9 389 SMART SM00936 279 370 6.7E-25 T 01-11-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DOE78_22240 25f6a61e5470bb88a723d9bdd2bf3e25 108 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 1 102 1.0E-10 T 01-11-2018 DOE78_09680 ed19b198eb3f033bedd3da9e18d1c0a3 451 Pfam PF13439 Glycosyltransferase Family 4 15 205 5.9E-19 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_09680 ed19b198eb3f033bedd3da9e18d1c0a3 451 SUPERFAMILY SSF53756 2 403 8.97E-75 T 01-11-2018 DOE78_09680 ed19b198eb3f033bedd3da9e18d1c0a3 451 Gene3D G3DSA:3.40.50.2000 223 384 1.1E-41 T 01-11-2018 DOE78_09680 ed19b198eb3f033bedd3da9e18d1c0a3 451 Gene3D G3DSA:3.40.50.2000 1 222 5.1E-24 T 01-11-2018 DOE78_09680 ed19b198eb3f033bedd3da9e18d1c0a3 451 Pfam PF00534 Glycosyl transferases group 1 213 381 3.0E-40 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_20380 d1cb79b0baae5ae74265224c2965dd12 338 Pfam PF14907 Uncharacterised nucleotidyltransferase 23 256 7.9E-37 T 01-11-2018 IPR039498 Uncharacterised nucleotidyltransferase DOE78_12235 2742bb247a0d87b4f6592201fb896a39 274 Pfam PF13228 Domain of unknown function (DUF4037) 125 214 2.1E-9 T 01-11-2018 IPR025117 Domain of unknown function DUF4037 DOE78_12235 2742bb247a0d87b4f6592201fb896a39 274 SUPERFAMILY SSF81301 5 139 5.32E-13 T 01-11-2018 DOE78_12235 2742bb247a0d87b4f6592201fb896a39 274 Pfam PF01909 Nucleotidyltransferase domain 10 61 1.6E-6 T 01-11-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DOE78_12235 2742bb247a0d87b4f6592201fb896a39 274 Gene3D G3DSA:3.30.460.10 3 149 8.5E-12 T 01-11-2018 DOE78_19150 1bd4342d1296cde5ff6baddc82ff7548 177 Gene3D G3DSA:2.40.50.140 89 171 7.9E-31 T 01-11-2018 DOE78_04795 645703cb2ce99a4de025153df62f9e34 191 SUPERFAMILY SSF46689 3 73 1.94E-11 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_04795 645703cb2ce99a4de025153df62f9e34 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 55 5.5E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_04795 645703cb2ce99a4de025153df62f9e34 191 Gene3D G3DSA:1.10.357.10 3 183 1.1E-18 T 01-11-2018 DOE78_04795 645703cb2ce99a4de025153df62f9e34 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.7E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_04795 645703cb2ce99a4de025153df62f9e34 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.7E-6 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_10530 397dc292a90e5364d5459a83c18f8227 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 22.765 T 01-11-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DOE78_10530 397dc292a90e5364d5459a83c18f8227 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 2.5E-44 T 01-11-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DOE78_10530 397dc292a90e5364d5459a83c18f8227 108 SUPERFAMILY SSF103481 7 106 2.35E-9 T 01-11-2018 DOE78_19435 a56a9de7a148254a311e47ba358be879 320 Gene3D G3DSA:3.80.30.20 50 245 1.9E-14 T 01-11-2018 IPR023404 Radical SAM, alpha/beta horseshoe DOE78_19435 a56a9de7a148254a311e47ba358be879 320 Pfam PF16199 Radical_SAM C-terminal domain 220 303 4.9E-24 T 01-11-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 DOE78_19435 a56a9de7a148254a311e47ba358be879 320 Pfam PF04055 Radical SAM superfamily 52 214 1.1E-12 T 01-11-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DOE78_19435 a56a9de7a148254a311e47ba358be879 320 SUPERFAMILY SSF102114 7 314 3.66E-53 T 01-11-2018 DOE78_19435 a56a9de7a148254a311e47ba358be879 320 SMART SM00729 32 259 2.8E-39 T 01-11-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DOE78_19435 a56a9de7a148254a311e47ba358be879 320 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 314 1.8E-134 T 01-11-2018 IPR005911 Protein YhcC-like GO:0051536 DOE78_17275 c2a1770c54b5005188cf34f82c790fb4 189 SUPERFAMILY SSF56784 4 163 5.2E-17 T 01-11-2018 IPR036412 HAD-like superfamily DOE78_17275 c2a1770c54b5005188cf34f82c790fb4 189 Gene3D G3DSA:3.40.50.1000 1 155 5.0E-7 T 01-11-2018 IPR023214 HAD superfamily DOE78_17275 c2a1770c54b5005188cf34f82c790fb4 189 PIRSF PIRSF021362 3 189 4.1E-62 T 01-11-2018 IPR009206 Nucleotidase, putative DOE78_02595 e6408331a8ecb91765af8967f3a5449e 522 SUPERFAMILY SSF48208 185 520 1.7E-34 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_02595 e6408331a8ecb91765af8967f3a5449e 522 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 190 515 9.8E-20 T 01-11-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DOE78_02595 e6408331a8ecb91765af8967f3a5449e 522 Gene3D G3DSA:1.50.10.10 192 519 6.1E-70 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_19305 73119d3767601e802d6e7b959bc029ce 92 Pfam PF14165 YtzH-like protein 3 88 7.6E-36 T 01-11-2018 IPR025547 YtzH-like protein DOE78_16145 66f44c793b61094b3f886edf33cefea0 292 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 1 291 1.0E-127 T 01-11-2018 DOE78_16145 66f44c793b61094b3f886edf33cefea0 292 Pfam PF14045 YIEGIA protein 8 287 1.4E-128 T 01-11-2018 IPR025918 YIEGIA protein DOE78_00805 5a91b870fab4bb133e0d064ba271f19a 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 3.3E-48 T 01-11-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00805 5a91b870fab4bb133e0d064ba271f19a 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.671 T 01-11-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_00805 5a91b870fab4bb133e0d064ba271f19a 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 2.1E-52 T 01-11-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_00805 5a91b870fab4bb133e0d064ba271f19a 120 Gene3D G3DSA:3.30.420.100 5 120 2.4E-47 T 01-11-2018 DOE78_00805 5a91b870fab4bb133e0d064ba271f19a 120 SUPERFAMILY SSF53137 7 118 1.29E-55 T 01-11-2018 DOE78_01325 643160b69c8459a7e6b803d0b42b147b 338 Gene3D G3DSA:2.50.20.10 23 214 1.5E-12 T 01-11-2018 DOE78_01325 643160b69c8459a7e6b803d0b42b147b 338 SUPERFAMILY SSF89392 28 202 1.26E-19 T 01-11-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DOE78_13060 edd667f130da8426b4f86c4fa5bdc08e 169 SUPERFAMILY SSF55729 1 161 4.92E-31 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_13060 edd667f130da8426b4f86c4fa5bdc08e 169 Gene3D G3DSA:3.40.630.30 2 166 2.1E-41 T 01-11-2018 DOE78_13060 edd667f130da8426b4f86c4fa5bdc08e 169 Pfam PF00583 Acetyltransferase (GNAT) family 41 139 1.0E-13 T 01-11-2018 IPR000182 GNAT domain DOE78_06550 86a711f52275542b9db3629b9a159687 262 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 65 256 2.3E-50 T 01-11-2018 IPR018728 Domain of unknown function DUF2268 DOE78_06910 fafd76a8e22c9690870641870b4bc3de 248 Pfam PF00005 ABC transporter 19 155 1.2E-28 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_06910 fafd76a8e22c9690870641870b4bc3de 248 Gene3D G3DSA:3.40.50.300 1 221 5.8E-62 T 01-11-2018 DOE78_06910 fafd76a8e22c9690870641870b4bc3de 248 SUPERFAMILY SSF52540 4 224 2.2E-60 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_06910 fafd76a8e22c9690870641870b4bc3de 248 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_06910 fafd76a8e22c9690870641870b4bc3de 248 SMART SM00382 28 205 1.7E-15 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_07460 7ba5c1bfbb7d9c7af77ec536b5b689a4 404 Pfam PF01098 Cell cycle protein 13 374 2.9E-101 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_07460 7ba5c1bfbb7d9c7af77ec536b5b689a4 404 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 332 356 - T 01-11-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_05045 9efb54fa8091a087a2c9101ff14557de 63 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 4 62 2.5E-30 T 01-11-2018 IPR019240 Protein of unknown function DUF2196 DOE78_05045 9efb54fa8091a087a2c9101ff14557de 63 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 4 62 3.4E-32 T 01-11-2018 IPR019240 Protein of unknown function DUF2196 DOE78_10735 6c1af7932a8acab1d3e31f53c7a05bcf 178 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 1 174 5.6E-37 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_12565 5a06ff2c012e3f89967c7ede2f7ffb5f 168 Pfam PF00583 Acetyltransferase (GNAT) family 41 145 3.3E-7 T 01-11-2018 IPR000182 GNAT domain DOE78_12565 5a06ff2c012e3f89967c7ede2f7ffb5f 168 SUPERFAMILY SSF55729 2 152 2.52E-19 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_12565 5a06ff2c012e3f89967c7ede2f7ffb5f 168 Gene3D G3DSA:3.40.630.30 1 163 4.6E-37 T 01-11-2018 DOE78_20830 917aa45267b302ec1006635148c446fb 605 Gene3D G3DSA:3.40.710.10 255 605 2.2E-91 T 01-11-2018 DOE78_20830 917aa45267b302ec1006635148c446fb 605 SUPERFAMILY SSF53955 48 259 9.84E-68 T 01-11-2018 IPR023346 Lysozyme-like domain superfamily DOE78_20830 917aa45267b302ec1006635148c446fb 605 Gene3D G3DSA:1.10.3810.10 53 251 8.6E-65 T 01-11-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_20830 917aa45267b302ec1006635148c446fb 605 Pfam PF00912 Transglycosylase 63 234 1.6E-56 T 01-11-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_20830 917aa45267b302ec1006635148c446fb 605 SUPERFAMILY SSF56601 217 604 2.72E-91 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_20830 917aa45267b302ec1006635148c446fb 605 Pfam PF00905 Penicillin binding protein transpeptidase domain 333 570 3.0E-22 T 01-11-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DOE78_01850 fbf556ff465d0e89bba8441a6a15b7e0 227 SUPERFAMILY SSF52317 2 219 5.56E-77 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_01850 fbf556ff465d0e89bba8441a6a15b7e0 227 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 6.9E-97 T 01-11-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01850 fbf556ff465d0e89bba8441a6a15b7e0 227 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 45.888 T 01-11-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01850 fbf556ff465d0e89bba8441a6a15b7e0 227 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 202 7.6E-44 T 01-11-2018 DOE78_01850 fbf556ff465d0e89bba8441a6a15b7e0 227 PIRSF PIRSF001586 1 222 9.7E-91 T 01-11-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DOE78_01850 fbf556ff465d0e89bba8441a6a15b7e0 227 SMART SM01211 1 219 4.3E-136 T 01-11-2018 DOE78_01850 fbf556ff465d0e89bba8441a6a15b7e0 227 Gene3D G3DSA:3.40.50.880 1 220 9.7E-74 T 01-11-2018 IPR029062 Class I glutamine amidotransferase-like DOE78_09725 0a128a165ad79a9ee4d51e318565a4ca 288 Pfam PF03773 Predicted permease 4 285 2.7E-51 T 01-11-2018 IPR005524 Predicted permease DUF318 DOE78_15240 0bace08ef7701a5f2a561505af5d16be 280 Pfam PF01734 Patatin-like phospholipase 6 170 1.0E-17 T 01-11-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DOE78_15240 0bace08ef7701a5f2a561505af5d16be 280 SUPERFAMILY SSF52151 4 277 3.66E-44 T 01-11-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DOE78_15240 0bace08ef7701a5f2a561505af5d16be 280 Gene3D G3DSA:3.40.1090.10 2 51 2.1E-13 T 01-11-2018 DOE78_15240 0bace08ef7701a5f2a561505af5d16be 280 Gene3D G3DSA:3.40.1090.10 52 232 4.6E-12 T 01-11-2018 DOE78_14890 6684630eaf1697b8b58e4edf5a1643d5 258 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 59 247 1.3E-25 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain DOE78_14890 6684630eaf1697b8b58e4edf5a1643d5 258 SUPERFAMILY SSF52266 53 256 1.69E-38 T 01-11-2018 DOE78_14890 6684630eaf1697b8b58e4edf5a1643d5 258 Gene3D G3DSA:3.40.50.1110 26 258 5.2E-38 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_20235 1208117587cc49b574773afa2d693f3f 582 Pfam PF01425 Amidase 29 437 1.6E-73 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_20235 1208117587cc49b574773afa2d693f3f 582 SUPERFAMILY SSF75304 8 444 5.89E-101 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_20235 1208117587cc49b574773afa2d693f3f 582 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 44 578 8.2E-184 T 01-11-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 DOE78_20235 1208117587cc49b574773afa2d693f3f 582 Gene3D G3DSA:1.20.58.1700 295 369 1.4E-128 T 01-11-2018 DOE78_20235 1208117587cc49b574773afa2d693f3f 582 Gene3D G3DSA:3.10.490.10 453 582 3.6E-45 T 01-11-2018 DOE78_20235 1208117587cc49b574773afa2d693f3f 582 Gene3D G3DSA:3.90.1300.10 44 443 1.4E-128 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_17735 37c86e5e9a319a6bd679b5d4fe09e18b 380 PIRSF PIRSF005572 1 380 2.5E-125 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DOE78_17735 37c86e5e9a319a6bd679b5d4fe09e18b 380 Gene3D G3DSA:1.10.260.50 15 278 4.6E-144 T 01-11-2018 DOE78_17735 37c86e5e9a319a6bd679b5d4fe09e18b 380 SUPERFAMILY SSF53383 3 375 5.6E-103 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_17735 37c86e5e9a319a6bd679b5d4fe09e18b 380 Pfam PF00266 Aminotransferase class-V 4 366 1.9E-85 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_17735 37c86e5e9a319a6bd679b5d4fe09e18b 380 Gene3D G3DSA:3.40.640.10 61 235 4.6E-144 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_17735 37c86e5e9a319a6bd679b5d4fe09e18b 380 Gene3D G3DSA:3.90.1150.10 4 369 4.6E-144 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_17735 37c86e5e9a319a6bd679b5d4fe09e18b 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 01-11-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DOE78_11785 bb7a5d477bac40eb40e9f712de0a4eb4 184 SUPERFAMILY SSF53448 3 178 2.45E-18 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_11785 bb7a5d477bac40eb40e9f712de0a4eb4 184 Pfam PF12804 MobA-like NTP transferase domain 1 151 1.4E-23 T 01-11-2018 IPR025877 MobA-like NTP transferase DOE78_11785 bb7a5d477bac40eb40e9f712de0a4eb4 184 Gene3D G3DSA:3.90.550.10 1 183 8.4E-36 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 Pfam PF02690 Na+/Pi-cotransporter 139 253 2.3E-19 T 01-11-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 Pfam PF02690 Na+/Pi-cotransporter 11 146 4.1E-51 T 01-11-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 Gene3D G3DSA:1.20.58.220 331 441 3.4E-17 T 01-11-2018 IPR038078 PhoU-like domain superfamily DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 Pfam PF01895 PhoU domain 446 530 2.9E-19 T 01-11-2018 IPR026022 PhoU domain DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 Pfam PF01895 PhoU domain 342 427 3.5E-13 T 01-11-2018 IPR026022 PhoU domain DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 SUPERFAMILY SSF109755 328 532 6.7E-55 T 01-11-2018 DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 3 308 1.0E-73 T 01-11-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 DOE78_17250 4173363c9f83965da2a5ffc03a184b63 537 Gene3D G3DSA:1.20.58.220 442 536 9.3E-24 T 01-11-2018 IPR038078 PhoU-like domain superfamily DOE78_21365 b05df90dea5603974d82d7b1b0efc168 280 Pfam PF03180 NLPA lipoprotein 40 276 3.9E-76 T 01-11-2018 IPR004872 Lipoprotein NlpA family DOE78_21365 b05df90dea5603974d82d7b1b0efc168 280 Gene3D G3DSA:3.40.190.10 119 227 4.0E-81 T 01-11-2018 DOE78_21365 b05df90dea5603974d82d7b1b0efc168 280 SUPERFAMILY SSF53850 39 279 5.1E-71 T 01-11-2018 DOE78_21365 b05df90dea5603974d82d7b1b0efc168 280 PIRSF PIRSF002854 1 276 2.6E-77 T 01-11-2018 IPR004872 Lipoprotein NlpA family DOE78_21365 b05df90dea5603974d82d7b1b0efc168 280 Gene3D G3DSA:3.40.190.10 54 270 4.0E-81 T 01-11-2018 DOE78_11075 e2c91e3d6aa7bcd409b0d348034c0bac 450 Gene3D G3DSA:3.40.190.10 34 445 5.2E-69 T 01-11-2018 DOE78_11075 e2c91e3d6aa7bcd409b0d348034c0bac 450 SUPERFAMILY SSF53850 20 445 2.66E-60 T 01-11-2018 DOE78_11075 e2c91e3d6aa7bcd409b0d348034c0bac 450 Pfam PF01547 Bacterial extracellular solute-binding protein 55 351 2.2E-25 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_10525 e1740779515f2b87c80e468478aa6081 381 Pfam PF12849 PBP superfamily domain 130 366 1.2E-27 T 01-11-2018 IPR024370 PBP domain DOE78_10525 e1740779515f2b87c80e468478aa6081 381 Gene3D G3DSA:3.40.190.10 207 343 1.5E-59 T 01-11-2018 DOE78_10525 e1740779515f2b87c80e468478aa6081 381 Gene3D G3DSA:3.40.190.10 129 378 1.5E-59 T 01-11-2018 DOE78_10525 e1740779515f2b87c80e468478aa6081 381 SUPERFAMILY SSF53850 128 380 1.13E-52 T 01-11-2018 DOE78_14955 3c89936106344d208789f7c831a16bf9 226 Gene3D G3DSA:3.30.240.20 79 155 8.8E-25 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_14955 3c89936106344d208789f7c831a16bf9 226 Gene3D G3DSA:3.30.240.20 168 226 2.0E-17 T 01-11-2018 IPR023090 UPF0702, alpha/beta domain superfamily DOE78_14955 3c89936106344d208789f7c831a16bf9 226 Pfam PF04239 Protein of unknown function (DUF421) 89 204 3.5E-33 T 01-11-2018 IPR007353 Protein of unknown function DUF421 DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 PRINTS PR01713 Nucleotide sugar epimerase signature 236 251 3.6E-15 T 01-11-2018 DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.6E-15 T 01-11-2018 DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 PRINTS PR01713 Nucleotide sugar epimerase signature 274 291 3.6E-15 T 01-11-2018 DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 3.6E-15 T 01-11-2018 DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 304 2.9E-58 T 01-11-2018 IPR016040 NAD(P)-binding domain DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 Gene3D G3DSA:3.90.25.10 179 307 6.6E-90 T 01-11-2018 DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 Gene3D G3DSA:3.40.50.720 5 295 6.6E-90 T 01-11-2018 DOE78_22485 3b97917e0acbed55e9d3281b61af701d 315 SUPERFAMILY SSF51735 1 311 6.76E-81 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 SUPERFAMILY SSF58104 248 579 2.62E-68 T 01-11-2018 DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 Gene3D G3DSA:1.10.287.950 271 579 1.0E-66 T 01-11-2018 DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 373 531 5.1E-39 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 SUPERFAMILY SSF103190 67 182 1.06E-7 T 01-11-2018 IPR029151 Periplasmic sensor-like domain superfamily DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 1.6E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 429 1.6E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 431 460 1.6E-18 T 01-11-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DOE78_01665 7503024b92aa75387a438174cb5bf32e 580 SMART SM00283 304 579 9.5E-71 T 01-11-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 SMART SM00829 27 360 9.4E-7 T 01-11-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 44 153 6.8E-31 T 01-11-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 SUPERFAMILY SSF50129 20 191 1.98E-55 T 01-11-2018 IPR011032 GroES-like superfamily DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 80 94 - T 01-11-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 SUPERFAMILY SSF51735 158 320 1.09E-42 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 Pfam PF00107 Zinc-binding dehydrogenase 194 320 5.5E-27 T 01-11-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 Gene3D G3DSA:3.90.180.10 30 345 1.4E-115 T 01-11-2018 DOE78_14090 eebac1e45c1acc70ab9309c6f6184d7b 363 Gene3D G3DSA:3.40.50.720 171 308 1.4E-115 T 01-11-2018 DOE78_16630 10afa33457375215eb2d828e8412dfd4 368 PIRSF PIRSF005622 3 368 4.7E-140 T 01-11-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DOE78_16630 10afa33457375215eb2d828e8412dfd4 368 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 17 366 1.4E-128 T 01-11-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DOE78_16630 10afa33457375215eb2d828e8412dfd4 368 Pfam PF01924 Hydrogenase formation hypA family 26 364 3.0E-141 T 01-11-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 DOE78_16630 10afa33457375215eb2d828e8412dfd4 368 Gene3D G3DSA:1.10.10.2140 317 366 3.6E-23 T 01-11-2018 DOE78_16630 10afa33457375215eb2d828e8412dfd4 368 Gene3D G3DSA:3.40.50.11740 66 303 3.6E-107 T 01-11-2018 DOE78_16630 10afa33457375215eb2d828e8412dfd4 368 Gene3D G3DSA:3.40.50.11750 35 263 3.6E-107 T 01-11-2018 DOE78_22605 100a6f7ccf29714bf550100ebc5355a4 396 SMART SM00228 296 362 4.5E-4 T 01-11-2018 IPR001478 PDZ domain GO:0005515 DOE78_22605 100a6f7ccf29714bf550100ebc5355a4 396 SUPERFAMILY SSF50156 304 386 1.25E-12 T 01-11-2018 IPR036034 PDZ superfamily GO:0005515 DOE78_22605 100a6f7ccf29714bf550100ebc5355a4 396 Gene3D G3DSA:2.30.42.10 277 369 2.5E-10 T 01-11-2018 DOE78_05450 3871e983aaa155988bf25c1afa378a90 252 Pfam PF01903 CbiX 134 235 4.9E-13 T 01-11-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DOE78_05450 3871e983aaa155988bf25c1afa378a90 252 Pfam PF01903 CbiX 9 112 9.8E-23 T 01-11-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DOE78_05450 3871e983aaa155988bf25c1afa378a90 252 Gene3D G3DSA:3.40.50.1400 1 120 1.7E-23 T 01-11-2018 DOE78_05450 3871e983aaa155988bf25c1afa378a90 252 Gene3D G3DSA:3.40.50.1400 122 242 1.5E-16 T 01-11-2018 DOE78_05450 3871e983aaa155988bf25c1afa378a90 252 SUPERFAMILY SSF53800 1 239 1.42E-41 T 01-11-2018 DOE78_06500 dffef94b51d52e222909698262f05713 62 Pfam PF14168 YjzC-like protein 1 55 4.6E-28 T 01-11-2018 IPR025549 YjzC-like protein DOE78_09950 49aee4bec47345f002f819417e139d94 489 Pfam PF13777 Domain of unknown function (DUF4173) 249 428 4.3E-54 T 01-11-2018 IPR025231 Domain of unknown function DUF4173 DOE78_18805 2131d81a0c79830e7dd45b51255a625b 663 SUPERFAMILY SSF52266 384 441 2.2E-6 T 01-11-2018 DOE78_18805 2131d81a0c79830e7dd45b51255a625b 663 SUPERFAMILY SSF52266 484 654 1.05E-9 T 01-11-2018 DOE78_15905 a57f6ff0fc7372c06b98a3d53a824524 235 Pfam PF07261 Replication initiation and membrane attachment 132 201 1.0E-26 T 01-11-2018 IPR006343 DnaD domain DOE78_15905 a57f6ff0fc7372c06b98a3d53a824524 235 Gene3D G3DSA:1.10.10.630 124 200 1.7E-32 T 01-11-2018 IPR034829 DnaD-like domain superfamily DOE78_15905 a57f6ff0fc7372c06b98a3d53a824524 235 SUPERFAMILY SSF158499 129 194 6.15E-20 T 01-11-2018 IPR034829 DnaD-like domain superfamily DOE78_15905 a57f6ff0fc7372c06b98a3d53a824524 235 Gene3D G3DSA:1.10.10.10 1 114 9.8E-36 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_15905 a57f6ff0fc7372c06b98a3d53a824524 235 SUPERFAMILY SSF46785 25 112 4.74E-7 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_15905 a57f6ff0fc7372c06b98a3d53a824524 235 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 129 199 1.0E-25 T 01-11-2018 IPR006343 DnaD domain DOE78_12090 12e57bcc4237621588c7c8dde8beac52 404 PIRSF PIRSF001434 1 394 2.2E-145 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_12090 12e57bcc4237621588c7c8dde8beac52 404 SUPERFAMILY SSF53383 29 391 1.6E-124 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_12090 12e57bcc4237621588c7c8dde8beac52 404 Gene3D G3DSA:3.40.640.10 2 256 3.9E-90 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_12090 12e57bcc4237621588c7c8dde8beac52 404 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_12090 12e57bcc4237621588c7c8dde8beac52 404 Gene3D G3DSA:3.90.1150.10 260 401 9.9E-57 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_12090 12e57bcc4237621588c7c8dde8beac52 404 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 390 2.8E-145 T 01-11-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 Pfam PF00106 short chain dehydrogenase 3 186 5.1E-45 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 SUPERFAMILY SSF51735 3 206 7.09E-49 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 Gene3D G3DSA:3.40.50.720 1 218 3.6E-51 T 01-11-2018 DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.6E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.6E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.6E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.6E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.6E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.8E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.8E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_05125 08ee5fd5fb2f1ac7664d35815878f758 219 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.8E-6 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_17795 971c98fa83e973f231318fb06ea485b6 784 Gene3D G3DSA:3.90.1640.30 58 319 6.3E-96 T 01-11-2018 DOE78_17795 971c98fa83e973f231318fb06ea485b6 784 Gene3D G3DSA:3.10.310.30 320 445 6.5E-35 T 01-11-2018 DOE78_17795 971c98fa83e973f231318fb06ea485b6 784 SUPERFAMILY SSF64182 59 453 1.05E-121 T 01-11-2018 IPR038763 DHH phosphoesterase superfamily DOE78_17795 971c98fa83e973f231318fb06ea485b6 784 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 569 769 1.2E-65 T 01-11-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal DOE78_17795 971c98fa83e973f231318fb06ea485b6 784 Pfam PF01368 DHH family 84 226 1.2E-9 T 01-11-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DOE78_17795 971c98fa83e973f231318fb06ea485b6 784 Pfam PF02272 DHHA1 domain 316 440 5.4E-20 T 01-11-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DOE78_17795 971c98fa83e973f231318fb06ea485b6 784 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 29 562 3.7E-184 T 01-11-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DOE78_20455 d94651850407d6b987f08297581085b3 143 Gene3D G3DSA:3.40.50.620 1 141 5.7E-36 T 01-11-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DOE78_20455 d94651850407d6b987f08297581085b3 143 SUPERFAMILY SSF52374 5 136 1.91E-25 T 01-11-2018 DOE78_20455 d94651850407d6b987f08297581085b3 143 Pfam PF01467 Cytidylyltransferase-like 8 133 3.9E-16 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_20455 d94651850407d6b987f08297581085b3 143 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 71 8.9E-19 T 01-11-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DOE78_11975 ee8e29344153b26f56ff0596f79bafea 101 Pfam PF03471 Transporter associated domain 13 94 3.9E-18 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_11975 ee8e29344153b26f56ff0596f79bafea 101 SMART SM01091 12 95 1.2E-18 T 01-11-2018 IPR005170 Transporter-associated domain DOE78_11975 ee8e29344153b26f56ff0596f79bafea 101 Gene3D G3DSA:3.30.465.10 6 94 1.7E-26 T 01-11-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DOE78_11975 ee8e29344153b26f56ff0596f79bafea 101 SUPERFAMILY SSF56176 10 93 1.55E-19 T 01-11-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DOE78_08760 242a51841800c5d6e62b291e6c8d0cc4 189 SUPERFAMILY SSF56112 26 154 1.5E-16 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_08760 242a51841800c5d6e62b291e6c8d0cc4 189 Gene3D G3DSA:1.10.510.10 16 159 6.0E-11 T 01-11-2018 DOE78_20955 b919f39dfff7440e9e571babe58b48e3 235 Pfam PF06725 3D domain 140 201 2.3E-18 T 01-11-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DOE78_20955 b919f39dfff7440e9e571babe58b48e3 235 SUPERFAMILY SSF50685 140 181 1.46E-6 T 01-11-2018 IPR036908 RlpA-like domain superfamily DOE78_06085 4c24179d93933e958d767edd74fb6331 258 Gene3D G3DSA:1.10.12.10 200 258 5.0E-24 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DOE78_06085 4c24179d93933e958d767edd74fb6331 258 Gene3D G3DSA:3.90.226.10 3 199 4.9E-70 T 01-11-2018 DOE78_06085 4c24179d93933e958d767edd74fb6331 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 257 3.9E-65 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DOE78_06085 4c24179d93933e958d767edd74fb6331 258 SUPERFAMILY SSF52096 3 257 5.86E-85 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_06085 4c24179d93933e958d767edd74fb6331 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 01-11-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DOE78_06005 b590abaeefd0e846f556beceb66fab1c 260 PIRSF PIRSF031509 5 260 3.2E-36 T 01-11-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 DOE78_06005 b590abaeefd0e846f556beceb66fab1c 260 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 146 257 3.9E-32 T 01-11-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF DOE78_05865 4d634279174afac71af57e079e509f23 56 Pfam PF14147 Sporulation protein YhaL 2 53 1.6E-23 T 01-11-2018 IPR025428 Sporulation protein YhaL DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 8.1E-27 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 430 450 8.1E-27 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 312 331 8.1E-27 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 389 409 8.1E-27 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 8.1E-27 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 8.1E-27 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 Pfam PF00209 Sodium:neurotransmitter symporter family 4 118 9.6E-37 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 Pfam PF00209 Sodium:neurotransmitter symporter family 149 487 4.5E-75 T 01-11-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DOE78_21090 25961e64c6a7bd80ac111a783b8bc64a 505 SUPERFAMILY SSF161070 4 488 7.06E-145 T 01-11-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DOE78_15220 23a4dbeeed3f20451c67e36ed0fcc73b 431 Pfam PF00860 Permease family 20 391 3.8E-39 T 01-11-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DOE78_23995 f6d48401d98954e13f5bd5f55f56e747 95 Pfam PF17261 Family of unknown function (DUF5327) 2 95 1.0E-24 T 01-11-2018 IPR035218 Protein of unknown function DUF5327 DOE78_23995 f6d48401d98954e13f5bd5f55f56e747 95 ProDom PD705231 YWDI GROUP-SPECIFIC 19 95 0.001 T 01-11-2018 IPR035218 Protein of unknown function DUF5327 DOE78_13520 e65bb00bc02a2ecaf700797046900b51 351 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 22 311 1.8E-86 T 01-11-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal DOE78_13520 e65bb00bc02a2ecaf700797046900b51 351 SUPERFAMILY SSF55729 132 312 6.92E-11 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10550 76b46a92490621606acc4643d6cc31b6 81 SUPERFAMILY SSF48619 4 48 1.84E-8 T 01-11-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DOE78_10550 76b46a92490621606acc4643d6cc31b6 81 Gene3D G3DSA:1.20.90.10 1 79 2.3E-15 T 01-11-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DOE78_12460 00ff57466d5b9583b503af556fc017d2 252 Gene3D G3DSA:3.40.630.30 1 248 2.0E-74 T 01-11-2018 DOE78_12460 00ff57466d5b9583b503af556fc017d2 252 Pfam PF13673 Acetyltransferase (GNAT) domain 147 241 5.7E-9 T 01-11-2018 IPR000182 GNAT domain DOE78_12460 00ff57466d5b9583b503af556fc017d2 252 SUPERFAMILY SSF55729 118 244 5.06E-17 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10625 5877fb4e932fc4e449c563a5b5d28f00 125 SUPERFAMILY SSF54593 1 124 1.32E-18 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10625 5877fb4e932fc4e449c563a5b5d28f00 125 Gene3D G3DSA:3.10.180.10 1 124 1.3E-24 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10625 5877fb4e932fc4e449c563a5b5d28f00 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 119 1.5E-6 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_22030 07eb72aa0c8cc8770a37bfc2838be32b 125 Gene3D G3DSA:2.60.40.420 26 125 1.3E-38 T 01-11-2018 IPR008972 Cupredoxin DOE78_22030 07eb72aa0c8cc8770a37bfc2838be32b 125 SUPERFAMILY SSF49503 40 125 6.81E-19 T 01-11-2018 IPR008972 Cupredoxin DOE78_22030 07eb72aa0c8cc8770a37bfc2838be32b 125 Pfam PF13473 Cupredoxin-like domain 32 124 4.7E-25 T 01-11-2018 IPR028096 EfeO-type cupredoxin-like domain DOE78_03090 6755cd84f0c1245b34b7fa398dbe60dd 247 SUPERFAMILY SSF52540 1 241 1.04E-80 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03090 6755cd84f0c1245b34b7fa398dbe60dd 247 Gene3D G3DSA:3.40.50.300 1 247 2.3E-78 T 01-11-2018 DOE78_03090 6755cd84f0c1245b34b7fa398dbe60dd 247 Pfam PF00005 ABC transporter 17 171 1.2E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03090 6755cd84f0c1245b34b7fa398dbe60dd 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03090 6755cd84f0c1245b34b7fa398dbe60dd 247 SMART SM00382 26 219 1.8E-16 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03090 6755cd84f0c1245b34b7fa398dbe60dd 247 PIRSF PIRSF039085 1 247 1.9E-116 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DOE78_09990 d27765d708513724938d73212d941e58 121 Gene3D G3DSA:3.10.450.50 2 111 4.7E-13 T 01-11-2018 DOE78_09990 d27765d708513724938d73212d941e58 121 Pfam PF14534 Domain of unknown function (DUF4440) 20 104 5.1E-10 T 01-11-2018 IPR027843 Domain of unknown function DUF4440 DOE78_09990 d27765d708513724938d73212d941e58 121 SUPERFAMILY SSF54427 1 110 2.14E-19 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_18875 71ec3d6bf8fd171bb2dc313a5ad6f8ea 290 Pfam PF06152 Phage minor capsid protein 2 45 273 2.5E-15 T 01-11-2018 IPR009319 Bacteriophage A118, Gp4, minor capsid GO:0005198 DOE78_16535 fc7027361d3d1dc24996a96f78cb7352 159 SUPERFAMILY SSF55729 44 144 3.17E-16 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_16535 fc7027361d3d1dc24996a96f78cb7352 159 Gene3D G3DSA:3.40.630.30 2 159 2.2E-19 T 01-11-2018 DOE78_16535 fc7027361d3d1dc24996a96f78cb7352 159 Pfam PF00583 Acetyltransferase (GNAT) family 37 137 2.5E-10 T 01-11-2018 IPR000182 GNAT domain DOE78_02605 5a9e8c30e392fdc5f4a4576182a6f46f 272 SUPERFAMILY SSF50182 98 155 4.25E-8 T 01-11-2018 IPR010920 LSM domain superfamily DOE78_02605 5a9e8c30e392fdc5f4a4576182a6f46f 272 Gene3D G3DSA:2.30.30.60 113 163 2.5E-11 T 01-11-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DOE78_02605 5a9e8c30e392fdc5f4a4576182a6f46f 272 Pfam PF00924 Mechanosensitive ion channel 57 199 1.9E-23 T 01-11-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DOE78_00685 266cd87a3c2cd48d2971b96a09df1c34 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.1E-64 T 01-11-2018 IPR023798 Ribosomal protein S7 domain DOE78_00685 266cd87a3c2cd48d2971b96a09df1c34 156 SUPERFAMILY SSF47973 1 149 1.15E-59 T 01-11-2018 IPR036823 Ribosomal protein S7 domain superfamily DOE78_00685 266cd87a3c2cd48d2971b96a09df1c34 156 Gene3D G3DSA:1.10.455.10 2 156 6.6E-62 T 01-11-2018 IPR036823 Ribosomal protein S7 domain superfamily DOE78_00685 266cd87a3c2cd48d2971b96a09df1c34 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.093 T 01-11-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DOE78_00685 266cd87a3c2cd48d2971b96a09df1c34 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 01-11-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_00685 266cd87a3c2cd48d2971b96a09df1c34 156 PIRSF PIRSF002122 5 156 2.0E-58 T 01-11-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DOE78_00685 266cd87a3c2cd48d2971b96a09df1c34 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.0E-69 T 01-11-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DOE78_13625 b8248eef2889fab13cb79330fc769152 431 Pfam PF13416 Bacterial extracellular solute-binding protein 70 370 2.4E-35 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_13625 b8248eef2889fab13cb79330fc769152 431 Gene3D G3DSA:3.40.190.10 167 424 6.4E-73 T 01-11-2018 DOE78_13625 b8248eef2889fab13cb79330fc769152 431 SUPERFAMILY SSF53850 52 425 1.04E-69 T 01-11-2018 DOE78_13625 b8248eef2889fab13cb79330fc769152 431 Gene3D G3DSA:3.40.190.10 68 387 6.4E-73 T 01-11-2018 DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 SUPERFAMILY SSF51735 42 285 4.74E-84 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 182 1.8E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 131 1.8E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 45 62 1.8E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 230 1.8E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 211 1.8E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 247 267 1.8E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 53 282 4.5E-63 T 01-11-2018 DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 Gene3D G3DSA:3.40.50.720 2 284 1.6E-91 T 01-11-2018 DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 192 211 2.5E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 180 2.5E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 131 2.5E-10 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06290 c3edd2276399d5c03c3125629f505cb5 287 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 179 207 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_21800 8f44c325d991fd43be6f2facdcbe9750 455 Pfam PF03929 PepSY-associated TM region 24 394 5.1E-70 T 01-11-2018 IPR005625 PepSY-associated TM protein DOE78_21800 8f44c325d991fd43be6f2facdcbe9750 455 Pfam PF03413 Peptidase propeptide and YPEB domain 71 126 4.4E-5 T 01-11-2018 IPR025711 PepSY domain DOE78_24550 0057f074d10f2e1a844a6074855eed83 52 Pfam PF14116 YyzF-like protein 4 50 7.9E-20 T 01-11-2018 IPR025626 YyzF-like protein DOE78_24550 0057f074d10f2e1a844a6074855eed83 52 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 2 49 4.6E-21 T 01-11-2018 IPR025626 YyzF-like protein DOE78_04175 688e689bbd422b0d0bed96a90996cd59 325 SUPERFAMILY SSF53822 46 309 2.52E-46 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_04175 688e689bbd422b0d0bed96a90996cd59 325 Gene3D G3DSA:3.40.50.2300 151 282 6.2E-55 T 01-11-2018 DOE78_04175 688e689bbd422b0d0bed96a90996cd59 325 Pfam PF13407 Periplasmic binding protein domain 49 302 2.5E-41 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_04175 688e689bbd422b0d0bed96a90996cd59 325 Gene3D G3DSA:3.40.50.2300 54 310 6.2E-55 T 01-11-2018 DOE78_07440 c858dcd8dc8ebce71d484085cc7a472c 199 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 5 156 4.4E-40 T 01-11-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 DOE78_07440 c858dcd8dc8ebce71d484085cc7a472c 199 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 27 154 5.5E-15 T 01-11-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DOE78_11950 5130711a4653fb957fbbb6ea0e27274a 459 SUPERFAMILY SSF53850 30 444 1.14E-52 T 01-11-2018 DOE78_11950 5130711a4653fb957fbbb6ea0e27274a 459 Gene3D G3DSA:3.40.190.10 25 457 9.6E-59 T 01-11-2018 DOE78_11950 5130711a4653fb957fbbb6ea0e27274a 459 Pfam PF13416 Bacterial extracellular solute-binding protein 50 377 6.0E-27 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_13245 6e94a15b4f1867bb0543185b7e383e5d 490 Gene3D G3DSA:1.10.4160.10 2 468 7.8E-101 T 01-11-2018 IPR038271 Purine-cytosine permease superfamily DOE78_13245 6e94a15b4f1867bb0543185b7e383e5d 490 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 16 433 8.1E-53 T 01-11-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 DOE78_18660 1f72164af2ebd2746ae5cd0700f6dd1f 380 Gene3D G3DSA:3.40.640.10 13 255 3.0E-132 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_18660 1f72164af2ebd2746ae5cd0700f6dd1f 380 Pfam PF00266 Aminotransferase class-V 2 361 1.5E-79 T 01-11-2018 IPR000192 Aminotransferase class V domain DOE78_18660 1f72164af2ebd2746ae5cd0700f6dd1f 380 PIRSF PIRSF005572 1 379 1.3E-117 T 01-11-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DOE78_18660 1f72164af2ebd2746ae5cd0700f6dd1f 380 Gene3D G3DSA:3.90.1150.10 2 371 3.0E-132 T 01-11-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DOE78_18660 1f72164af2ebd2746ae5cd0700f6dd1f 380 SUPERFAMILY SSF53383 1 372 1.29E-100 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 Gene3D G3DSA:3.10.350.10 51 103 1.0E-18 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 Gene3D G3DSA:3.10.350.10 110 164 2.5E-18 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 Gene3D G3DSA:3.10.350.10 170 219 7.9E-14 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 SUPERFAMILY SSF54106 171 214 3.14E-10 T 01-11-2018 DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 Pfam PF01476 LysM domain 114 156 4.9E-15 T 01-11-2018 IPR018392 LysM domain DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 Pfam PF01476 LysM domain 173 214 2.0E-10 T 01-11-2018 IPR018392 LysM domain DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 Pfam PF01476 LysM domain 55 97 4.4E-15 T 01-11-2018 IPR018392 LysM domain DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 SUPERFAMILY SSF54106 112 156 6.67E-12 T 01-11-2018 DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 SMART SM00257 113 156 9.5E-17 T 01-11-2018 IPR018392 LysM domain DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 SMART SM00257 54 97 2.9E-16 T 01-11-2018 IPR018392 LysM domain DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 SMART SM00257 172 215 1.3E-11 T 01-11-2018 IPR018392 LysM domain DOE78_23550 1d8b9d30f5ebc9826a933828b8e9d7fb 278 SUPERFAMILY SSF54106 54 97 3.27E-12 T 01-11-2018 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 SUPERFAMILY SSF52096 11 190 2.7E-70 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 Pfam PF00574 Clp protease 13 191 2.4E-84 T 01-11-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 190 4.2E-100 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.0E-50 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.0E-50 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.0E-50 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 3.0E-50 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.0E-50 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 191 41.816 T 01-11-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 Gene3D G3DSA:3.90.226.10 1 191 5.4E-81 T 01-11-2018 DOE78_12890 508f9d63dcdf6df23ecfc7a881fdf2b8 191 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 01-11-2018 IPR033135 ClpP, histidine active site DOE78_15585 e60541f72136a1cbd5124f7d9d9df7b7 215 Pfam PF01966 HD domain 27 125 1.2E-6 T 01-11-2018 IPR006674 HD domain DOE78_15585 e60541f72136a1cbd5124f7d9d9df7b7 215 SMART SM00471 20 135 1.3E-6 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_15585 e60541f72136a1cbd5124f7d9d9df7b7 215 SUPERFAMILY SSF109604 3 213 1.91E-70 T 01-11-2018 DOE78_15585 e60541f72136a1cbd5124f7d9d9df7b7 215 Gene3D G3DSA:1.20.58.1910 101 215 3.1E-48 T 01-11-2018 DOE78_15585 e60541f72136a1cbd5124f7d9d9df7b7 215 Gene3D G3DSA:1.10.472.50 1 98 1.8E-31 T 01-11-2018 DOE78_09820 2c35bc7650e30e8f2eae5c23733aca2f 289 SUPERFAMILY SSF161111 10 210 7.45E-55 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_09820 2c35bc7650e30e8f2eae5c23733aca2f 289 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 1.5E-19 T 01-11-2018 IPR027470 Cation efflux protein, cytoplasmic domain DOE78_09820 2c35bc7650e30e8f2eae5c23733aca2f 289 Pfam PF01545 Cation efflux family 17 208 1.7E-47 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_09820 2c35bc7650e30e8f2eae5c23733aca2f 289 Gene3D G3DSA:1.20.1510.10 12 209 1.3E-56 T 01-11-2018 IPR027469 Cation efflux transmembrane domain superfamily DOE78_09820 2c35bc7650e30e8f2eae5c23733aca2f 289 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 288 3.6E-69 T 01-11-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DOE78_09820 2c35bc7650e30e8f2eae5c23733aca2f 289 SUPERFAMILY SSF160240 212 288 1.83E-20 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DOE78_09820 2c35bc7650e30e8f2eae5c23733aca2f 289 Gene3D G3DSA:3.30.70.1350 211 289 1.4E-17 T 01-11-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DOE78_18470 594457e40afca03743a1266f9c5b39f8 128 Pfam PF04186 FxsA cytoplasmic membrane protein 6 112 1.2E-34 T 01-11-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 DOE78_13070 a30affcdc69c7306ae4b46584dbfb974 327 Gene3D G3DSA:1.20.1260.10 2 147 1.9E-11 T 01-11-2018 IPR012347 Ferritin-like DOE78_13070 a30affcdc69c7306ae4b46584dbfb974 327 Gene3D G3DSA:1.20.1260.10 173 316 2.6E-7 T 01-11-2018 IPR012347 Ferritin-like DOE78_13070 a30affcdc69c7306ae4b46584dbfb974 327 Pfam PF11553 Protein of unknown function (DUF3231) 168 324 7.1E-41 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_13070 a30affcdc69c7306ae4b46584dbfb974 327 Pfam PF11553 Protein of unknown function (DUF3231) 3 157 2.3E-35 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_00650 52cb5769fab3ece988316389f2561941 166 Pfam PF00466 Ribosomal protein L10 6 101 7.3E-29 T 01-11-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DOE78_00650 52cb5769fab3ece988316389f2561941 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.133 T 01-11-2018 IPR022973 Ribosomal protein L10 DOE78_00650 52cb5769fab3ece988316389f2561941 166 SUPERFAMILY SSF160369 5 160 2.62E-55 T 01-11-2018 DOE78_00650 52cb5769fab3ece988316389f2561941 166 Gene3D G3DSA:3.30.70.1730 2 165 3.1E-43 T 01-11-2018 DOE78_00650 52cb5769fab3ece988316389f2561941 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 143 0.004 T 01-11-2018 DOE78_00650 52cb5769fab3ece988316389f2561941 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 01-11-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_19815 852da0a9643da177384290449de21004 283 SUPERFAMILY SSF51658 10 270 1.83E-60 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_19815 852da0a9643da177384290449de21004 283 Gene3D G3DSA:3.20.20.150 7 281 1.7E-65 T 01-11-2018 DOE78_19815 852da0a9643da177384290449de21004 283 Pfam PF01261 Xylose isomerase-like TIM barrel 29 227 3.4E-31 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_18890 4123b0d3641be93627abc3fb9cd746b0 134 Pfam PF13022 Helix-turn-helix of insertion element transposase 4 113 9.0E-13 T 01-11-2018 IPR024978 Homeodomain, phBC6A51-type DOE78_18890 4123b0d3641be93627abc3fb9cd746b0 134 SUPERFAMILY SSF46689 4 100 7.77E-5 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_18890 4123b0d3641be93627abc3fb9cd746b0 134 Gene3D G3DSA:1.10.10.60 5 95 8.1E-8 T 01-11-2018 DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.7E-8 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.7E-8 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.7E-8 T 01-11-2018 IPR000485 AsnC-type HTH domain GO:0043565 DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 Gene3D G3DSA:3.30.70.920 57 153 1.9E-21 T 01-11-2018 DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 Gene3D G3DSA:1.10.10.10 1 56 9.2E-9 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 SUPERFAMILY SSF46785 3 61 1.27E-7 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 48 5.4E-7 T 01-11-2018 DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 SMART SM00344 3 114 1.8E-5 T 01-11-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 2.8E-15 T 01-11-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DOE78_20790 76d80b9e6c75802973bc5d7e190d8afe 167 SUPERFAMILY SSF54909 66 147 7.91E-19 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_20780 32c47bff1772d5c9152f73952a54f9d7 289 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 10 285 5.1E-80 T 01-11-2018 IPR003797 DegV DOE78_20780 32c47bff1772d5c9152f73952a54f9d7 289 SUPERFAMILY SSF82549 8 288 2.14E-78 T 01-11-2018 DOE78_20780 32c47bff1772d5c9152f73952a54f9d7 289 Gene3D G3DSA:3.30.1180.10 161 289 1.4E-30 T 01-11-2018 DOE78_20780 32c47bff1772d5c9152f73952a54f9d7 289 Pfam PF02645 Uncharacterised protein, DegV family COG1307 8 287 2.2E-73 T 01-11-2018 IPR003797 DegV DOE78_20780 32c47bff1772d5c9152f73952a54f9d7 289 Gene3D G3DSA:3.40.50.10170 5 160 7.5E-44 T 01-11-2018 DOE78_08890 55e669c57b36349bb080816cfbfa56d7 200 SUPERFAMILY SSF52266 2 197 4.83E-46 T 01-11-2018 DOE78_08890 55e669c57b36349bb080816cfbfa56d7 200 Gene3D G3DSA:3.40.50.1110 1 200 7.8E-58 T 01-11-2018 IPR036514 SGNH hydrolase superfamily DOE78_08890 55e669c57b36349bb080816cfbfa56d7 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 4 139 2.9E-8 T 01-11-2018 IPR013830 SGNH hydrolase-type esterase domain DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 Gene3D G3DSA:3.40.50.720 2 234 1.6E-45 T 01-11-2018 DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.8E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 8.8E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.8E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.8E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.8E-17 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 Pfam PF00106 short chain dehydrogenase 9 188 2.2E-39 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.8E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.8E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.8E-8 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_19950 8cb4333ea3dcafae056a4c4a8ea5d21c 235 SUPERFAMILY SSF51735 8 217 1.02E-46 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_17215 445beb08b7b6d6f6b9bf36e6a94b6f0f 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 320 6.0E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_17215 445beb08b7b6d6f6b9bf36e6a94b6f0f 323 Gene3D G3DSA:1.10.3720.10 95 322 1.8E-36 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_17215 445beb08b7b6d6f6b9bf36e6a94b6f0f 323 SUPERFAMILY SSF161098 46 316 1.5E-34 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_17215 445beb08b7b6d6f6b9bf36e6a94b6f0f 323 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 44 319 5.1E-81 T 01-11-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DOE78_09165 212a18562774ba00bee12669283c536e 409 Gene3D G3DSA:2.40.110.10 133 229 3.0E-28 T 01-11-2018 DOE78_09165 212a18562774ba00bee12669283c536e 409 SUPERFAMILY SSF56645 37 226 4.97E-33 T 01-11-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DOE78_09165 212a18562774ba00bee12669283c536e 409 SUPERFAMILY SSF47203 259 388 1.06E-11 T 01-11-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DOE78_09165 212a18562774ba00bee12669283c536e 409 Gene3D G3DSA:1.10.540.10 16 130 4.7E-28 T 01-11-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DOE78_09165 212a18562774ba00bee12669283c536e 409 Gene3D G3DSA:1.20.140.10 236 407 5.0E-36 T 01-11-2018 DOE78_09165 212a18562774ba00bee12669283c536e 409 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 264 388 1.6E-23 T 01-11-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DOE78_09165 212a18562774ba00bee12669283c536e 409 PIRSF PIRSF016578 12 408 9.4E-110 T 01-11-2018 DOE78_02865 87293e155338b8da97c0d5a28494e550 862 Pfam PF12704 MacB-like periplasmic core domain 19 207 4.5E-10 T 01-11-2018 IPR025857 MacB-like periplasmic core domain DOE78_02865 87293e155338b8da97c0d5a28494e550 862 Pfam PF02687 FtsX-like permease family 316 413 1.3E-9 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_02865 87293e155338b8da97c0d5a28494e550 862 Pfam PF02687 FtsX-like permease family 761 851 7.0E-10 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_02120 3d5cc0d40ee2f0f871b385cf5a4b8e36 54 SUPERFAMILY SSF47598 2 50 9.45E-12 T 01-11-2018 IPR010985 Ribbon-helix-helix GO:0006355 DOE78_02120 3d5cc0d40ee2f0f871b385cf5a4b8e36 54 Gene3D G3DSA:1.10.1220.10 1 48 1.6E-10 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DOE78_08220 e788ef55026f5d32f89472a2708abc83 142 Pfam PF03748 Flagellar basal body-associated protein FliL 50 142 1.5E-16 T 01-11-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DOE78_09595 d800454ab843ba67cdf3d619c6f15657 502 Pfam PF00535 Glycosyl transferase family 2 13 116 4.5E-18 T 01-11-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DOE78_09595 d800454ab843ba67cdf3d619c6f15657 502 SUPERFAMILY SSF53448 12 169 2.28E-21 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_09595 d800454ab843ba67cdf3d619c6f15657 502 Gene3D G3DSA:3.90.550.10 4 233 3.0E-22 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_17060 250b3138dbaaef3e4d5d4db0f142e471 106 Gene3D G3DSA:3.30.700.10 11 106 1.8E-11 T 01-11-2018 DOE78_17060 250b3138dbaaef3e4d5d4db0f142e471 106 SUPERFAMILY SSF54523 11 76 1.33E-14 T 01-11-2018 DOE78_17060 250b3138dbaaef3e4d5d4db0f142e471 106 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 1.1E-7 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DOE78_17060 250b3138dbaaef3e4d5d4db0f142e471 106 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 1.1E-7 T 01-11-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DOE78_17060 250b3138dbaaef3e4d5d4db0f142e471 106 PIRSF PIRSF029928 1 104 1.3E-36 T 01-11-2018 IPR016940 ComG operon protein C GO:0030420 DOE78_17060 250b3138dbaaef3e4d5d4db0f142e471 106 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 30 2.2E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_17060 250b3138dbaaef3e4d5d4db0f142e471 106 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.2E-6 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_02095 b7fc07a3f75ab253bd19cd749a331ace 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 379 4.9E-112 T 01-11-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DOE78_02095 b7fc07a3f75ab253bd19cd749a331ace 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 01-11-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DOE78_02095 b7fc07a3f75ab253bd19cd749a331ace 387 SUPERFAMILY SSF56796 5 385 5.5E-117 T 01-11-2018 DOE78_02095 b7fc07a3f75ab253bd19cd749a331ace 387 Gene3D G3DSA:1.20.1090.10 189 386 2.3E-66 T 01-11-2018 DOE78_02095 b7fc07a3f75ab253bd19cd749a331ace 387 Gene3D G3DSA:3.40.50.1970 1 187 1.3E-49 T 01-11-2018 DOE78_20740 243062aa04063dd2fb3f74ec209ed714 134 Pfam PF08868 YugN-like family 3 131 1.2E-55 T 01-11-2018 IPR014967 Uncharacterised protein family, YugN-like DOE78_20740 243062aa04063dd2fb3f74ec209ed714 134 Gene3D G3DSA:3.30.310.100 3 124 6.1E-30 T 01-11-2018 IPR036491 YugN-like superfamily DOE78_20740 243062aa04063dd2fb3f74ec209ed714 134 SUPERFAMILY SSF160755 1 132 1.28E-38 T 01-11-2018 IPR036491 YugN-like superfamily DOE78_16595 4c49ba8034652b28d6abeaaf80e38542 322 Gene3D G3DSA:3.60.15.10 2 262 4.7E-47 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_16595 4c49ba8034652b28d6abeaaf80e38542 322 SUPERFAMILY SSF56281 14 319 8.39E-43 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_16595 4c49ba8034652b28d6abeaaf80e38542 322 Pfam PF00753 Metallo-beta-lactamase superfamily 19 235 1.5E-19 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_16595 4c49ba8034652b28d6abeaaf80e38542 322 SMART SM00849 21 235 5.1E-20 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_01645 c3c8b493bf4687b0b31f6ae677a42567 477 SMART SM00327 177 370 1.2E-18 T 01-11-2018 IPR002035 von Willebrand factor, type A DOE78_01645 c3c8b493bf4687b0b31f6ae677a42567 477 Gene3D G3DSA:3.40.50.410 174 370 2.6E-32 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_01645 c3c8b493bf4687b0b31f6ae677a42567 477 SUPERFAMILY SSF53300 175 367 1.95E-25 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_01645 c3c8b493bf4687b0b31f6ae677a42567 477 Pfam PF00092 von Willebrand factor type A domain 179 359 8.6E-17 T 01-11-2018 IPR002035 von Willebrand factor, type A DOE78_12870 3cdb3db86f2c4a52a86c2425926171ae 254 Gene3D G3DSA:1.10.3720.10 51 246 1.9E-26 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12870 3cdb3db86f2c4a52a86c2425926171ae 254 SUPERFAMILY SSF161098 54 239 5.23E-35 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12870 3cdb3db86f2c4a52a86c2425926171ae 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 246 1.3E-27 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_11475 3fd64f2a9ca20e4b7fa336ce571b5e48 662 Gene3D G3DSA:3.40.50.300 1 358 2.6E-16 T 01-11-2018 DOE78_11475 3fd64f2a9ca20e4b7fa336ce571b5e48 662 Gene3D G3DSA:3.40.50.300 394 630 2.9E-12 T 01-11-2018 DOE78_11475 3fd64f2a9ca20e4b7fa336ce571b5e48 662 SUPERFAMILY SSF52540 1 618 5.32E-15 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11475 3fd64f2a9ca20e4b7fa336ce571b5e48 662 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 1 653 2.1E-159 T 01-11-2018 IPR017599 DNA sulphur modification protein DndD DOE78_11140 81b85a41c96f6563bb858614c5c4bd8c 135 SUPERFAMILY SSF55729 13 123 9.98E-25 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_11140 81b85a41c96f6563bb858614c5c4bd8c 135 Pfam PF13673 Acetyltransferase (GNAT) domain 33 126 1.0E-14 T 01-11-2018 IPR000182 GNAT domain DOE78_11140 81b85a41c96f6563bb858614c5c4bd8c 135 Gene3D G3DSA:3.40.630.30 3 134 9.7E-34 T 01-11-2018 DOE78_16455 142636e120d6bdc5af0dfbdb5dadfde6 75 Pfam PF14004 Protein of unknown function (DUF4227) 7 75 3.6E-32 T 01-11-2018 IPR025321 Protein of unknown function DUF4227 DOE78_21300 781ae226cfa78074f5e95a4148eacd54 258 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 18 252 34.923 T 01-11-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_21300 781ae226cfa78074f5e95a4148eacd54 258 Gene3D G3DSA:3.20.20.70 1 257 2.1E-87 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_21300 781ae226cfa78074f5e95a4148eacd54 258 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 18 248 9.8E-69 T 01-11-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_21300 781ae226cfa78074f5e95a4148eacd54 258 SUPERFAMILY SSF51569 3 253 3.22E-72 T 01-11-2018 DOE78_21300 781ae226cfa78074f5e95a4148eacd54 258 Pfam PF01487 Type I 3-dehydroquinase 20 249 6.4E-66 T 01-11-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DOE78_05880 e0b2fe8db43f05b18d634cffb3e00679 27 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 4 27 4.8E-16 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_05880 e0b2fe8db43f05b18d634cffb3e00679 27 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 5 26 1.4E-13 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_04740 36393ec1cf27deb37fa3b9c4828bf271 381 Pfam PF12704 MacB-like periplasmic core domain 14 221 4.4E-36 T 01-11-2018 IPR025857 MacB-like periplasmic core domain DOE78_04740 36393ec1cf27deb37fa3b9c4828bf271 381 Pfam PF02687 FtsX-like permease family 287 374 1.7E-15 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_19630 9211daa7cea35f707a69669f33702c6d 339 Gene3D G3DSA:2.160.10.10 234 334 9.0E-28 T 01-11-2018 DOE78_19630 9211daa7cea35f707a69669f33702c6d 339 SUPERFAMILY SSF53448 24 299 3.37E-31 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_19630 9211daa7cea35f707a69669f33702c6d 339 Pfam PF00483 Nucleotidyl transferase 24 144 4.3E-6 T 01-11-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DOE78_19630 9211daa7cea35f707a69669f33702c6d 339 Gene3D G3DSA:3.90.550.10 150 233 3.1E-5 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_19630 9211daa7cea35f707a69669f33702c6d 339 Gene3D G3DSA:3.90.550.10 1 149 3.8E-21 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_19630 9211daa7cea35f707a69669f33702c6d 339 SUPERFAMILY SSF51161 251 318 7.81E-15 T 01-11-2018 IPR011004 Trimeric LpxA-like superfamily DOE78_02565 079d1d71945f5ff9214d2b4b31e30516 589 Pfam PF06580 Histidine kinase 387 466 1.8E-24 T 01-11-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DOE78_02565 079d1d71945f5ff9214d2b4b31e30516 589 Gene3D G3DSA:1.20.1480.50 286 380 1.2E-7 T 01-11-2018 DOE78_02565 079d1d71945f5ff9214d2b4b31e30516 589 SUPERFAMILY SSF55874 441 574 3.41E-18 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02565 079d1d71945f5ff9214d2b4b31e30516 589 SMART SM00387 477 578 6.1E-7 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02565 079d1d71945f5ff9214d2b4b31e30516 589 Gene3D G3DSA:3.30.565.10 442 576 1.5E-19 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_15515 afd7197c3059097a0e9902c98af14c04 83 Pfam PF10751 Protein of unknown function (DUF2535) 1 83 2.0E-38 T 01-11-2018 IPR019687 Protein of unknown function DUF2535 DOE78_07265 53730c7207b401cfaf43af651876f448 78 Pfam PF08796 Protein of unknown function (DUF1797) 7 77 3.1E-28 T 01-11-2018 IPR014904 Protein of unknown function DUF1797 DOE78_07265 53730c7207b401cfaf43af651876f448 78 PIRSF PIRSF037356 1 78 1.2E-32 T 01-11-2018 IPR014904 Protein of unknown function DUF1797 DOE78_07265 53730c7207b401cfaf43af651876f448 78 SUPERFAMILY SSF143567 2 78 1.14E-28 T 01-11-2018 IPR038073 YkuJ-like superfamily DOE78_07265 53730c7207b401cfaf43af651876f448 78 Gene3D G3DSA:3.30.720.20 1 78 1.1E-32 T 01-11-2018 IPR038073 YkuJ-like superfamily DOE78_14800 f98733d518201cabe98065ab6b0da861 451 Pfam PF02386 Cation transport protein 16 429 2.0E-59 T 01-11-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DOE78_17445 4f8aa083c53df85c23237f8827acc57f 147 Gene3D G3DSA:1.10.10.410 91 147 1.0E-24 T 01-11-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DOE78_17445 4f8aa083c53df85c23237f8827acc57f 147 Pfam PF09424 Yqey-like protein 5 146 6.1E-54 T 01-11-2018 IPR019004 Uncharacterised protein YqeY/AIM41 DOE78_17445 4f8aa083c53df85c23237f8827acc57f 147 Gene3D G3DSA:1.10.1510.10 1 90 4.6E-30 T 01-11-2018 DOE78_17445 4f8aa083c53df85c23237f8827acc57f 147 SUPERFAMILY SSF89095 1 147 2.2E-41 T 01-11-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DOE78_05945 bfba8af4ff0d951e545b78c6aadcbc11 241 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 1 234 2.0E-70 T 01-11-2018 DOE78_05945 bfba8af4ff0d951e545b78c6aadcbc11 241 Pfam PF12787 EcsC protein family 8 234 1.7E-74 T 01-11-2018 IPR024787 EcsC protein DOE78_09295 6f4d6bc1fc6f4e634834c21a8a2960db 296 SUPERFAMILY SSF47240 3 292 4.2E-66 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_09295 6f4d6bc1fc6f4e634834c21a8a2960db 296 Gene3D G3DSA:1.10.620.20 1 270 1.8E-77 T 01-11-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DOE78_09295 6f4d6bc1fc6f4e634834c21a8a2960db 296 Pfam PF03405 Fatty acid desaturase 9 292 1.6E-51 T 01-11-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 DOE78_10875 265df8b859f88b960c65ac8078a28eb0 40 Pfam PF13040 Fur-regulated basic protein B 1 37 3.0E-9 T 01-11-2018 IPR025004 Transcriptional regulatory protein SenN/SenS DOE78_06385 92078aa70fb85bafcda8c3118a17b8da 43 Pfam PF13081 Domain of unknown function (DUF3941) 18 41 7.8E-9 T 01-11-2018 IPR025077 Protein of unknown function DUF3941 DOE78_14245 4c9f1bb1b3116249379148506720e9bb 332 Gene3D G3DSA:3.40.50.2000 153 300 8.0E-15 T 01-11-2018 DOE78_14245 4c9f1bb1b3116249379148506720e9bb 332 Pfam PF00534 Glycosyl transferases group 1 169 269 5.4E-11 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_14245 4c9f1bb1b3116249379148506720e9bb 332 SUPERFAMILY SSF53756 30 329 1.47E-24 T 01-11-2018 DOE78_14480 07048745f2b6100c189e64c14dbfd0c8 37 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 14 36 5.9E-11 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_14480 07048745f2b6100c189e64c14dbfd0c8 37 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 12 37 7.3E-14 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_16300 419de9c42e7cb420b2f02b941e08d071 398 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 6 393 8.0E-22 T 01-11-2018 DOE78_14500 9483702cd729fdabb1da0c59788a6162 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 01-11-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DOE78_14500 9483702cd729fdabb1da0c59788a6162 494 Gene3D G3DSA:3.40.309.10 274 493 2.6E-82 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_14500 9483702cd729fdabb1da0c59788a6162 494 Pfam PF00171 Aldehyde dehydrogenase family 28 489 7.3E-189 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_14500 9483702cd729fdabb1da0c59788a6162 494 SUPERFAMILY SSF53720 19 492 2.49E-182 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_14500 9483702cd729fdabb1da0c59788a6162 494 Gene3D G3DSA:3.40.605.10 10 273 2.4E-118 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_21345 88cf1154201a3cc81931fa2a06b4942d 321 Pfam PF03186 CobD/Cbib protein 10 293 8.4E-104 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DOE78_21345 88cf1154201a3cc81931fa2a06b4942d 321 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 320 92.969 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DOE78_21345 88cf1154201a3cc81931fa2a06b4942d 321 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 10 269 4.0E-80 T 01-11-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DOE78_16700 769352266c7dc6b0379c8ddf434b825c 157 Gene3D G3DSA:2.30.30.40 8 132 1.9E-30 T 01-11-2018 DOE78_16700 769352266c7dc6b0379c8ddf434b825c 157 Gene3D G3DSA:2.40.50.180 25 133 1.9E-30 T 01-11-2018 DOE78_16700 769352266c7dc6b0379c8ddf434b825c 157 SUPERFAMILY SSF50341 4 141 7.06E-31 T 01-11-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DOE78_16700 769352266c7dc6b0379c8ddf434b825c 157 Pfam PF01584 CheW-like domain 7 141 2.9E-31 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_16700 769352266c7dc6b0379c8ddf434b825c 157 SMART SM00260 2 138 7.2E-26 T 01-11-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DOE78_19480 02e8d436dc333972c296aeed0bf51854 80 Gene3D G3DSA:2.40.240.20 1 77 8.9E-33 T 01-11-2018 DOE78_19480 02e8d436dc333972c296aeed0bf51854 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 2.2E-35 T 01-11-2018 IPR019699 Protein of unknown function DUF2584 DOE78_19480 02e8d436dc333972c296aeed0bf51854 80 SUPERFAMILY SSF88697 1 80 7.45E-29 T 01-11-2018 IPR015947 PUA-like superfamily DOE78_08215 9f2f010bdf01db656dc9cecd15451d91 74 Pfam PF06289 Flagellar protein (FlbD) 2 58 1.0E-25 T 01-11-2018 IPR009384 Swarming motility protein SwrD-like DOE78_09260 617dbe696bffebe4c7ce0ccb3bfa6fe7 278 SUPERFAMILY SSF53613 1 271 2.18E-44 T 01-11-2018 IPR029056 Ribokinase-like DOE78_09260 617dbe696bffebe4c7ce0ccb3bfa6fe7 278 Pfam PF00294 pfkB family carbohydrate kinase 20 270 9.6E-26 T 01-11-2018 IPR011611 Carbohydrate kinase PfkB DOE78_09260 617dbe696bffebe4c7ce0ccb3bfa6fe7 278 Gene3D G3DSA:3.40.1190.20 1 272 1.5E-41 T 01-11-2018 IPR029056 Ribokinase-like DOE78_00550 9d76c2014a8989d0ce5b87642ba974f9 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 150 2.2E-58 T 01-11-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 DOE78_00550 9d76c2014a8989d0ce5b87642ba974f9 153 Gene3D G3DSA:1.10.10.1240 2 72 2.9E-36 T 01-11-2018 DOE78_00550 9d76c2014a8989d0ce5b87642ba974f9 153 PIRSF PIRSF010607 1 153 2.5E-66 T 01-11-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 DOE78_00550 9d76c2014a8989d0ce5b87642ba974f9 153 Gene3D G3DSA:1.10.1200.150 73 153 5.3E-32 T 01-11-2018 DOE78_19855 45893120acdf60836e1089e9bf60ae26 238 Gene3D G3DSA:3.40.50.2300 1 124 1.7E-32 T 01-11-2018 DOE78_19855 45893120acdf60836e1089e9bf60ae26 238 SMART SM00850 141 237 3.4E-19 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_19855 45893120acdf60836e1089e9bf60ae26 238 Pfam PF04397 LytTr DNA-binding domain 144 234 5.1E-17 T 01-11-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DOE78_19855 45893120acdf60836e1089e9bf60ae26 238 Gene3D G3DSA:2.40.50.1020 131 232 5.8E-18 T 01-11-2018 DOE78_19855 45893120acdf60836e1089e9bf60ae26 238 SUPERFAMILY SSF52172 1 117 1.85E-31 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_19855 45893120acdf60836e1089e9bf60ae26 238 Pfam PF00072 Response regulator receiver domain 3 112 8.8E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_19855 45893120acdf60836e1089e9bf60ae26 238 SMART SM00448 1 112 1.1E-24 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_10220 4afd638765a25191797eefca489c58bf 335 Gene3D G3DSA:1.20.1260.10 1 147 8.3E-6 T 01-11-2018 IPR012347 Ferritin-like DOE78_10220 4afd638765a25191797eefca489c58bf 335 Pfam PF11553 Protein of unknown function (DUF3231) 4 160 3.2E-38 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_10220 4afd638765a25191797eefca489c58bf 335 Pfam PF11553 Protein of unknown function (DUF3231) 169 331 8.2E-54 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_15985 1aeb1472ecc7cb2157f4376546b0df1c 107 Gene3D G3DSA:1.10.287.1080 1 106 4.6E-35 T 01-11-2018 DOE78_15985 1aeb1472ecc7cb2157f4376546b0df1c 107 PIRSF PIRSF029904 1 106 4.7E-52 T 01-11-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD DOE78_15985 1aeb1472ecc7cb2157f4376546b0df1c 107 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 20 99 1.2E-20 T 01-11-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DOE78_15985 1aeb1472ecc7cb2157f4376546b0df1c 107 SUPERFAMILY SSF101386 2 99 9.81E-28 T 01-11-2018 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 Gene3D G3DSA:1.10.1370.30 3 505 4.5E-210 T 01-11-2018 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 451 469 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 232 248 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 406 427 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 152 172 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 296 312 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 337 356 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 249 268 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 269 288 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 383 400 1.4E-78 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 SUPERFAMILY SSF55486 10 499 1.47E-117 T 01-11-2018 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 PIRSF PIRSF006615 4 505 5.3E-198 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_15805 60610f0d8ef5451cba1674eab6693c27 511 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 5 499 9.4E-223 T 01-11-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DOE78_08650 43accb6bd673a9d91f4829c27a447df0 423 SUPERFAMILY SSF53383 60 398 3.21E-47 T 01-11-2018 IPR015424 Pyridoxal phosphate-dependent transferase DOE78_08650 43accb6bd673a9d91f4829c27a447df0 423 Pfam PF06838 Methionine gamma-lyase 14 414 2.3E-212 T 01-11-2018 IPR009651 Putative methionine gamma-lyase DOE78_08650 43accb6bd673a9d91f4829c27a447df0 423 Gene3D G3DSA:3.40.640.10 58 271 2.0E-182 T 01-11-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DOE78_08650 43accb6bd673a9d91f4829c27a447df0 423 Gene3D G3DSA:3.90.1150.60 17 410 2.0E-182 T 01-11-2018 DOE78_09520 0838e0839d986ef9fd6c13008d4c5dab 325 Pfam PF13536 Putative multidrug resistance efflux transporter 38 305 6.2E-106 T 01-11-2018 IPR032713 Putative multidrug resistance efflux transporter DOE78_02335 1235b6f2b9abb842034489812ec8b3dd 112 Pfam PF14276 Domain of unknown function (DUF4363) 24 109 1.7E-8 T 01-11-2018 IPR025373 Protein of unknown function DUF4363 DOE78_07870 3731854e3a9ad2ef1b3aef41d09b1818 243 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 39.481 T 01-11-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07870 3731854e3a9ad2ef1b3aef41d09b1818 243 SUPERFAMILY SSF51366 1 233 8.17E-72 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_07870 3731854e3a9ad2ef1b3aef41d09b1818 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 227 1.2E-46 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07870 3731854e3a9ad2ef1b3aef41d09b1818 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 229 2.0E-63 T 01-11-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07870 3731854e3a9ad2ef1b3aef41d09b1818 243 Gene3D G3DSA:3.20.20.70 1 240 4.6E-80 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_07870 3731854e3a9ad2ef1b3aef41d09b1818 243 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 01-11-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_07870 3731854e3a9ad2ef1b3aef41d09b1818 243 SMART SM00934 4 229 9.6E-89 T 01-11-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DOE78_12420 314056e67c5dbc1850131ebbf1d423eb 120 Pfam PF08858 IDEAL domain 65 93 2.5E-5 T 01-11-2018 IPR014957 IDEAL domain DOE78_12420 314056e67c5dbc1850131ebbf1d423eb 120 SMART SM00914 50 95 0.006 T 01-11-2018 IPR014957 IDEAL domain DOE78_12065 6b278bad5698921005ed16e40e94faf0 360 Gene3D G3DSA:3.40.50.720 3 169 3.1E-26 T 01-11-2018 DOE78_12065 6b278bad5698921005ed16e40e94faf0 360 SUPERFAMILY SSF51735 3 156 3.82E-28 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_12065 6b278bad5698921005ed16e40e94faf0 360 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 5.4E-17 T 01-11-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DOE78_15225 3db0302f654ff377964531dbcb0da350 190 Pfam PF00578 AhpC/TSA family 53 171 1.2E-36 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_15225 3db0302f654ff377964531dbcb0da350 190 Gene3D G3DSA:3.40.30.10 22 190 1.3E-51 T 01-11-2018 DOE78_15225 3db0302f654ff377964531dbcb0da350 190 ProSitePatterns PS00194 Thioredoxin family active site. 80 98 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DOE78_15225 3db0302f654ff377964531dbcb0da350 190 SUPERFAMILY SSF52833 50 186 1.07E-46 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_23025 f28cba76f19ff3c951800739f3e732c5 486 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 310 480 9.2E-59 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23025 f28cba76f19ff3c951800739f3e732c5 486 SMART SM00646 368 480 3.2E-51 T 01-11-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DOE78_23025 f28cba76f19ff3c951800739f3e732c5 486 SUPERFAMILY SSF53187 308 484 4.71E-60 T 01-11-2018 DOE78_23025 f28cba76f19ff3c951800739f3e732c5 486 Pfam PF04122 Putative cell wall binding repeat 2 117 203 1.6E-18 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23025 f28cba76f19ff3c951800739f3e732c5 486 Pfam PF04122 Putative cell wall binding repeat 2 211 297 3.2E-17 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23025 f28cba76f19ff3c951800739f3e732c5 486 Pfam PF04122 Putative cell wall binding repeat 2 16 103 1.9E-18 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23025 f28cba76f19ff3c951800739f3e732c5 486 Gene3D G3DSA:3.40.630.40 307 486 1.4E-66 T 01-11-2018 DOE78_04460 a5c45ec538c57c41baada040f7f11d2d 100 Pfam PF12840 Helix-turn-helix domain 5 77 4.0E-13 T 01-11-2018 DOE78_04460 a5c45ec538c57c41baada040f7f11d2d 100 Gene3D G3DSA:1.10.10.10 1 100 1.3E-25 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_04460 a5c45ec538c57c41baada040f7f11d2d 100 SMART SM00418 5 98 7.8E-16 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_04460 a5c45ec538c57c41baada040f7f11d2d 100 SUPERFAMILY SSF46785 4 96 2.2E-20 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20920 ea202572b4a4448a9515b3739578b5be 278 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 276 17.905 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DOE78_20920 ea202572b4a4448a9515b3739578b5be 278 Pfam PF02673 Bacitracin resistance protein BacA 9 270 3.2E-82 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DOE78_20920 ea202572b4a4448a9515b3739578b5be 278 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 269 5.4E-91 T 01-11-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DOE78_00880 48eccd796de9f7bba445d324a8568b63 264 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 37.694 T 01-11-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 DOE78_00880 48eccd796de9f7bba445d324a8568b63 264 Pfam PF02361 Cobalt transport protein 14 236 1.7E-56 T 01-11-2018 IPR003339 ABC/ECF transporter, transmembrane component DOE78_03220 e944aaa74c8b84648a605768e2b17aa7 214 Pfam PF04012 PspA/IM30 family 3 210 2.6E-20 T 01-11-2018 IPR007157 PspA/IM30 DOE78_15315 bba86b2da4cecf35574687d1d7c089b5 212 Pfam PF03006 Haemolysin-III related 8 204 1.7E-38 T 01-11-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 DOE78_15315 bba86b2da4cecf35574687d1d7c089b5 212 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 209 4.6E-63 T 01-11-2018 IPR005744 Hly-III GO:0016021|GO:0019835 DOE78_19970 5b9e9b904836ab48ee131672fbb64b42 472 PIRSF PIRSF006304 2 453 2.0E-170 T 01-11-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DOE78_19970 5b9e9b904836ab48ee131672fbb64b42 472 Pfam PF03611 PTS system sugar-specific permease component 9 391 1.4E-82 T 01-11-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DOE78_15695 77e65bf47f0f2d3caa5f00298933530c 394 Pfam PF01425 Amidase 282 380 7.9E-9 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_15695 77e65bf47f0f2d3caa5f00298933530c 394 Pfam PF01425 Amidase 15 196 1.0E-51 T 01-11-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_15695 77e65bf47f0f2d3caa5f00298933530c 394 Gene3D G3DSA:3.90.1300.10 7 391 7.4E-90 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_15695 77e65bf47f0f2d3caa5f00298933530c 394 ProSitePatterns PS00571 Amidases signature. 106 137 - T 01-11-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DOE78_15695 77e65bf47f0f2d3caa5f00298933530c 394 SUPERFAMILY SSF75304 2 391 1.31E-88 T 01-11-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DOE78_10780 bfc653a2b1bbb1a251b71e568e61e436 284 Pfam PF01740 STAS domain 166 262 4.8E-11 T 01-11-2018 IPR002645 STAS domain DOE78_10780 bfc653a2b1bbb1a251b71e568e61e436 284 SUPERFAMILY SSF52091 165 273 5.49E-15 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_10780 bfc653a2b1bbb1a251b71e568e61e436 284 Gene3D G3DSA:3.30.750.24 159 278 1.6E-34 T 01-11-2018 IPR036513 STAS domain superfamily DOE78_01300 915c652a93f95642184a1649cef7aed2 319 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 304 1.2E-66 T 01-11-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 DOE78_01300 915c652a93f95642184a1649cef7aed2 319 SUPERFAMILY SSF51658 88 227 4.75E-11 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_01300 915c652a93f95642184a1649cef7aed2 319 Pfam PF03851 UV-endonuclease UvdE 5 275 8.9E-88 T 01-11-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 DOE78_01300 915c652a93f95642184a1649cef7aed2 319 Gene3D G3DSA:3.20.20.150 2 310 3.6E-94 T 01-11-2018 DOE78_17950 154bd8a47362184dca16134d99a792ba 258 Gene3D G3DSA:2.70.70.10 127 256 8.4E-20 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_17950 154bd8a47362184dca16134d99a792ba 258 SUPERFAMILY SSF51261 108 254 2.51E-17 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_17950 154bd8a47362184dca16134d99a792ba 258 Pfam PF01551 Peptidase family M23 161 251 3.2E-17 T 01-11-2018 IPR016047 Peptidase M23 DOE78_04960 8cbbde3f9e6a121d3f390aa097414894 329 Gene3D G3DSA:3.40.50.10490 3 156 2.2E-44 T 01-11-2018 DOE78_04960 8cbbde3f9e6a121d3f390aa097414894 329 Pfam PF01380 SIS domain 26 145 6.3E-15 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_04960 8cbbde3f9e6a121d3f390aa097414894 329 Pfam PF01380 SIS domain 191 279 8.4E-7 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_04960 8cbbde3f9e6a121d3f390aa097414894 329 PIRSF PIRSF009290 1 329 4.6E-96 T 01-11-2018 IPR024713 Fructosamine deglycase FrlB DOE78_04960 8cbbde3f9e6a121d3f390aa097414894 329 Gene3D G3DSA:3.40.50.12570 194 287 7.7E-64 T 01-11-2018 DOE78_04960 8cbbde3f9e6a121d3f390aa097414894 329 SUPERFAMILY SSF53697 14 329 1.11E-62 T 01-11-2018 DOE78_04960 8cbbde3f9e6a121d3f390aa097414894 329 Gene3D G3DSA:1.10.10.2240 162 311 7.7E-64 T 01-11-2018 DOE78_15740 65b91066eae813f5019c9015e4a40c40 153 Pfam PF02681 Divergent PAP2 family 2 141 1.7E-41 T 01-11-2018 IPR003832 Protein of unknown function DUF212 DOE78_14990 a91697155d26e502e8839eecbb55877f 639 SUPERFAMILY SSF56300 157 521 1.52E-7 T 01-11-2018 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 SUPERFAMILY SSF52833 6 104 4.83E-37 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 Pfam PF00085 Thioredoxin 5 102 7.0E-31 T 01-11-2018 IPR013766 Thioredoxin domain GO:0045454 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 PIRSF PIRSF000077 1 104 1.5E-41 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 01-11-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 1.1E-38 T 01-11-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 PRINTS PR00421 Thioredoxin family signature 20 28 9.5E-9 T 01-11-2018 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 PRINTS PR00421 Thioredoxin family signature 28 37 9.5E-9 T 01-11-2018 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 PRINTS PR00421 Thioredoxin family signature 68 79 9.5E-9 T 01-11-2018 DOE78_18240 3d3fe0d07fa8a8e59d3e92a7125f33e0 104 Gene3D G3DSA:3.40.30.10 1 104 2.3E-35 T 01-11-2018 DOE78_01895 fb215388a5222abdda4bf31bb94038b8 345 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 220 329 2.1E-24 T 01-11-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain DOE78_01895 fb215388a5222abdda4bf31bb94038b8 345 SUPERFAMILY SSF159774 49 339 4.18E-94 T 01-11-2018 IPR023158 YerB-like superfamily DOE78_01895 fb215388a5222abdda4bf31bb94038b8 345 Gene3D G3DSA:3.50.90.10 34 343 9.9E-104 T 01-11-2018 IPR023158 YerB-like superfamily DOE78_01895 fb215388a5222abdda4bf31bb94038b8 345 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 53 191 8.3E-47 T 01-11-2018 IPR021416 Protein of unknown function DUF3048, N-terminal DOE78_05835 9464dbce2e73aa9006b9c37e05098a4e 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 261 2.1E-57 T 01-11-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DOE78_05835 9464dbce2e73aa9006b9c37e05098a4e 262 Gene3D G3DSA:1.10.12.10 205 262 8.5E-20 T 01-11-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DOE78_05835 9464dbce2e73aa9006b9c37e05098a4e 262 Gene3D G3DSA:3.90.226.10 1 201 2.0E-53 T 01-11-2018 DOE78_05835 9464dbce2e73aa9006b9c37e05098a4e 262 SUPERFAMILY SSF52096 5 261 2.13E-68 T 01-11-2018 IPR029045 ClpP/crotonase-like domain superfamily DOE78_13115 7831498a5eab5e06e4eff83867c7723a 133 Pfam PF03413 Peptidase propeptide and YPEB domain 68 121 8.2E-12 T 01-11-2018 IPR025711 PepSY domain DOE78_13115 7831498a5eab5e06e4eff83867c7723a 133 Gene3D G3DSA:3.10.450.40 60 125 4.4E-17 T 01-11-2018 DOE78_18450 0ccc51949c0bf651aa6c049dddc9efd5 422 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 306 325 - T 01-11-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DOE78_18450 0ccc51949c0bf651aa6c049dddc9efd5 422 SUPERFAMILY SSF53659 3 421 7.68E-141 T 01-11-2018 DOE78_18450 0ccc51949c0bf651aa6c049dddc9efd5 422 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 421 7.0E-221 T 01-11-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DOE78_18450 0ccc51949c0bf651aa6c049dddc9efd5 422 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 21 416 1.7E-122 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DOE78_18450 0ccc51949c0bf651aa6c049dddc9efd5 422 Gene3D G3DSA:3.40.718.10 1 422 3.4E-181 T 01-11-2018 DOE78_18450 0ccc51949c0bf651aa6c049dddc9efd5 422 SMART SM01329 20 417 6.9E-183 T 01-11-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DOE78_06800 9def5a269cb9f6303a442a227057e10b 53 Pfam PF13217 Protein of unknown function (DUF4025) 2 50 4.6E-22 T 01-11-2018 IPR025100 Protein of unknown function DUF4025 DOE78_00280 a0b5aaebd5dcba105a4274d84d65b9ea 58 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 13 22 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_00280 a0b5aaebd5dcba105a4274d84d65b9ea 58 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 54 3.5E-6 T 01-11-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DOE78_04085 979489e7c65c391020930c4b8d1eede8 111 Gene3D G3DSA:3.30.70.1490 1 111 2.3E-33 T 01-11-2018 IPR036764 Cysteine protease Prp superfamily DOE78_04085 979489e7c65c391020930c4b8d1eede8 111 Pfam PF04327 Cysteine protease Prp 3 104 3.6E-26 T 01-11-2018 IPR007422 Cysteine protease Prp DOE78_04085 979489e7c65c391020930c4b8d1eede8 111 SUPERFAMILY SSF118010 9 107 4.06E-29 T 01-11-2018 IPR036764 Cysteine protease Prp superfamily DOE78_11985 3d524998c2a9a0f2e21f763ec9f02495 386 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 2 228 7.9E-9 T 01-11-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase DOE78_11985 3d524998c2a9a0f2e21f763ec9f02495 386 SUPERFAMILY SSF51905 184 382 6.25E-10 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_11985 3d524998c2a9a0f2e21f763ec9f02495 386 SUPERFAMILY SSF51905 1 235 5.47E-17 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_11985 3d524998c2a9a0f2e21f763ec9f02495 386 Gene3D G3DSA:3.50.50.60 1 386 3.6E-18 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_00200 b4c56ea327b6bbc8c6eb5e213cbbfc8d 109 Gene3D G3DSA:3.30.70.120 1 103 1.7E-44 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_00200 b4c56ea327b6bbc8c6eb5e213cbbfc8d 109 SUPERFAMILY SSF54913 1 108 1.14E-12 T 01-11-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DOE78_00200 b4c56ea327b6bbc8c6eb5e213cbbfc8d 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 3.8E-55 T 01-11-2018 IPR010375 Cyclic-di-AMP receptor DOE78_05165 e9ab47b29af5e9b6fbc4763924617446 58 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 10 58 4.1E-17 T 01-11-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 DOE78_05165 e9ab47b29af5e9b6fbc4763924617446 58 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 11 58 1.2E-17 T 01-11-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 DOE78_08100 06ce603639e9ac1836947966c658ef51 95 SUPERFAMILY SSF160544 9 87 2.88E-25 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DOE78_08100 06ce603639e9ac1836947966c658ef51 95 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 7 90 7.6E-36 T 01-11-2018 IPR004683 Type III secretion system substrate exporter FlhB-like DOE78_08100 06ce603639e9ac1836947966c658ef51 95 Gene3D G3DSA:3.40.1690.10 8 91 3.0E-27 T 01-11-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DOE78_08100 06ce603639e9ac1836947966c658ef51 95 Pfam PF01312 FlhB HrpN YscU SpaS Family 11 83 8.1E-21 T 01-11-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DOE78_01600 918d331dbda6c2e809bee3b9ce3ab6f3 137 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_01600 918d331dbda6c2e809bee3b9ce3ab6f3 137 Pfam PF00293 NUDIX domain 9 118 5.9E-18 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_01600 918d331dbda6c2e809bee3b9ce3ab6f3 137 SUPERFAMILY SSF55811 6 128 2.17E-29 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_01600 918d331dbda6c2e809bee3b9ce3ab6f3 137 PRINTS PR00502 NUDIX hydrolase family signature 37 51 3.9E-6 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_01600 918d331dbda6c2e809bee3b9ce3ab6f3 137 PRINTS PR00502 NUDIX hydrolase family signature 51 66 3.9E-6 T 01-11-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DOE78_01600 918d331dbda6c2e809bee3b9ce3ab6f3 137 Gene3D G3DSA:3.90.79.10 2 133 5.8E-34 T 01-11-2018 DOE78_19090 87e325f79afd60774d16d78bd8af8551 162 Pfam PF04492 Bacteriophage replication protein O 37 110 5.4E-9 T 01-11-2018 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 DOE78_19090 87e325f79afd60774d16d78bd8af8551 162 Gene3D G3DSA:1.10.10.10 34 123 2.8E-5 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_08520 390db29870a8bf52828b505a82fd3712 429 Pfam PF00675 Insulinase (Peptidase family M16) 63 173 4.9E-16 T 01-11-2018 IPR011765 Peptidase M16, N-terminal DOE78_08520 390db29870a8bf52828b505a82fd3712 429 Pfam PF05193 Peptidase M16 inactive domain 181 362 3.1E-16 T 01-11-2018 IPR007863 Peptidase M16, C-terminal DOE78_08520 390db29870a8bf52828b505a82fd3712 429 SUPERFAMILY SSF63411 282 427 2.27E-17 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DOE78_08520 390db29870a8bf52828b505a82fd3712 429 Gene3D G3DSA:3.30.830.10 238 427 6.6E-39 T 01-11-2018 DOE78_08520 390db29870a8bf52828b505a82fd3712 429 Gene3D G3DSA:3.30.830.10 7 237 9.6E-61 T 01-11-2018 DOE78_08520 390db29870a8bf52828b505a82fd3712 429 SUPERFAMILY SSF63411 13 220 2.33E-42 T 01-11-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DOE78_21115 63743fb056265507439231643d6b5231 280 Gene3D G3DSA:3.20.20.410 1 280 1.4E-98 T 01-11-2018 IPR036520 UPF0759 superfamily DOE78_21115 63743fb056265507439231643d6b5231 280 Pfam PF01904 Protein of unknown function DUF72 16 263 4.1E-59 T 01-11-2018 IPR002763 Protein of unknown function DUF72 DOE78_21115 63743fb056265507439231643d6b5231 280 SUPERFAMILY SSF117396 1 267 5.62E-86 T 01-11-2018 IPR036520 UPF0759 superfamily DOE78_23490 7f49adf73273f4f0747f1447098133d9 230 Pfam PF04172 LrgB-like family 14 222 4.0E-68 T 01-11-2018 IPR007300 CidB/LrgB family DOE78_11070 24b83ab15a4832e8eab019c8f9bd8230 212 Pfam PF04854 Protein of unknown function, DUF624 20 96 1.1E-24 T 01-11-2018 IPR006938 Protein of unknown function DUF624 DOE78_03785 f0b45725048af4065c38f7441617ef0d 148 SUPERFAMILY SSF88697 1 141 8.45E-22 T 01-11-2018 IPR015947 PUA-like superfamily DOE78_03785 f0b45725048af4065c38f7441617ef0d 148 Pfam PF04266 ASCH domain 4 85 7.6E-5 T 01-11-2018 IPR007374 ASCH domain DOE78_03785 f0b45725048af4065c38f7441617ef0d 148 Gene3D G3DSA:2.30.130.30 1 148 6.3E-30 T 01-11-2018 DOE78_02420 0cc915171f39560b91662564834bed34 465 Pfam PF00367 phosphotransferase system, EIIB 13 43 1.2E-12 T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_02420 0cc915171f39560b91662564834bed34 465 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 24 41 - T 01-11-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DOE78_02420 0cc915171f39560b91662564834bed34 465 SUPERFAMILY SSF55604 11 85 1.44E-15 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_02420 0cc915171f39560b91662564834bed34 465 Pfam PF02378 Phosphotransferase system, EIIC 112 398 5.4E-47 T 01-11-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DOE78_02420 0cc915171f39560b91662564834bed34 465 Gene3D G3DSA:3.30.1360.60 5 83 9.9E-20 T 01-11-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DOE78_01055 4a2791166a9c68cde052273c0f027499 87 Pfam PF02583 Metal-sensitive transcriptional repressor 5 83 1.1E-23 T 01-11-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DOE78_01055 4a2791166a9c68cde052273c0f027499 87 Gene3D G3DSA:1.20.58.1000 2 86 3.8E-22 T 01-11-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily DOE78_13210 1439f48411e183b612a3ded429d961fa 1045 Gene3D G3DSA:3.40.50.300 726 1041 1.5E-26 T 01-11-2018 DOE78_13210 1439f48411e183b612a3ded429d961fa 1045 SUPERFAMILY SSF52540 28 1027 9.91E-21 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13210 1439f48411e183b612a3ded429d961fa 1045 SUPERFAMILY SSF52540 812 1034 2.13E-23 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_13210 1439f48411e183b612a3ded429d961fa 1045 Gene3D G3DSA:3.40.50.300 1 232 1.7E-42 T 01-11-2018 DOE78_13210 1439f48411e183b612a3ded429d961fa 1045 Pfam PF13558 Putative exonuclease SbcCD, C subunit 939 1001 5.5E-12 T 01-11-2018 DOE78_02360 6161909a22ecc9079f6bc1eb0ac01d95 400 SUPERFAMILY SSF103473 12 396 2.88E-47 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_02360 6161909a22ecc9079f6bc1eb0ac01d95 400 Pfam PF07690 Major Facilitator Superfamily 32 354 2.7E-27 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_02360 6161909a22ecc9079f6bc1eb0ac01d95 400 Gene3D G3DSA:1.20.1250.20 5 398 4.1E-37 T 01-11-2018 DOE78_20080 60357671f643cfe7cc529b5499b7c854 298 Gene3D G3DSA:1.10.3720.10 19 289 7.5E-58 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_20080 60357671f643cfe7cc529b5499b7c854 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 287 3.5E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_20080 60357671f643cfe7cc529b5499b7c854 298 SUPERFAMILY SSF161098 27 298 3.27E-65 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_17875 51a9af981ed80af8f26c85547a2c8adf 532 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 49 5.3E-27 T 01-11-2018 IPR014248 Spore coat assembly protein SafA DOE78_17875 51a9af981ed80af8f26c85547a2c8adf 532 Gene3D G3DSA:3.10.350.10 1 52 1.0E-16 T 01-11-2018 IPR036779 LysM domain superfamily DOE78_17875 51a9af981ed80af8f26c85547a2c8adf 532 Pfam PF01476 LysM domain 4 48 2.5E-16 T 01-11-2018 IPR018392 LysM domain DOE78_17875 51a9af981ed80af8f26c85547a2c8adf 532 SUPERFAMILY SSF54106 2 48 3.27E-12 T 01-11-2018 DOE78_17875 51a9af981ed80af8f26c85547a2c8adf 532 SMART SM00257 3 48 2.7E-18 T 01-11-2018 IPR018392 LysM domain DOE78_21410 fa16ff5103ae2627f5ad6e790657244c 330 Pfam PF00248 Aldo/keto reductase family 28 328 2.7E-72 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain DOE78_21410 fa16ff5103ae2627f5ad6e790657244c 330 Gene3D G3DSA:3.20.20.100 15 330 1.3E-114 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_21410 fa16ff5103ae2627f5ad6e790657244c 330 SUPERFAMILY SSF51430 13 329 1.11E-93 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 227 242 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 SUPERFAMILY SSF51430 3 263 2.75E-104 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 Gene3D G3DSA:3.20.20.100 1 274 1.7E-123 T 01-11-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 PRINTS PR00069 Aldo-keto reductase signature 122 139 3.1E-53 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 PRINTS PR00069 Aldo-keto reductase signature 34 58 3.1E-53 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 PRINTS PR00069 Aldo-keto reductase signature 90 108 3.1E-53 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 PRINTS PR00069 Aldo-keto reductase signature 156 185 3.1E-53 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 PRINTS PR00069 Aldo-keto reductase signature 194 218 3.1E-53 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 PIRSF PIRSF000097 109 272 1.2E-58 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 PIRSF PIRSF000097 1 114 1.1E-44 T 01-11-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 Pfam PF00248 Aldo/keto reductase family 15 259 9.9E-63 T 01-11-2018 IPR023210 NADP-dependent oxidoreductase domain DOE78_21600 86617a6baa31283dea0862a8f9b8a5e1 274 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 01-11-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DOE78_04765 032538a245cf45f5ee69ab629f62c148 229 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 9 109 4.4E-17 T 01-11-2018 IPR018745 Domain of unknown function DUF2294 DOE78_18610 6796959dfac8b7beee7f7e7e061f7491 151 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 117 2.0E-30 T 01-11-2018 IPR014229 Sporulation protein YtfJ DOE78_18610 6796959dfac8b7beee7f7e7e061f7491 151 PIRSF PIRSF021377 1 148 3.4E-64 T 01-11-2018 IPR014229 Sporulation protein YtfJ DOE78_18610 6796959dfac8b7beee7f7e7e061f7491 151 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 127 1.0E-57 T 01-11-2018 IPR014229 Sporulation protein YtfJ DOE78_13890 bd205354874959a8aa165b63477c5549 248 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 14 226 2.0E-53 T 01-11-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 DOE78_13890 bd205354874959a8aa165b63477c5549 248 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 11 229 8.2E-59 T 01-11-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 DOE78_17035 1cccc3c5ca459013d6ba2068219f99e3 68 Pfam PF14038 YqzE-like protein 4 54 5.0E-25 T 01-11-2018 IPR025622 YqzE-like protein DOE78_07890 6ab1380a470c68f2524afb1f5008512d 291 Pfam PF03755 YicC-like family, N-terminal region 2 156 1.9E-40 T 01-11-2018 IPR013527 YicC-like, N-terminal DOE78_07890 6ab1380a470c68f2524afb1f5008512d 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 2 291 5.4E-92 T 01-11-2018 IPR005229 Conserved hypothetical protein CHP00255 DOE78_07890 6ab1380a470c68f2524afb1f5008512d 291 Pfam PF08340 Domain of unknown function (DUF1732) 207 291 1.3E-37 T 01-11-2018 IPR013551 Domain of unknown function DUF1732 DOE78_18615 c88749054d5f5db3445341e2387d3937 231 Pfam PF11167 Protein of unknown function (DUF2953) 132 184 1.9E-16 T 01-11-2018 IPR021338 Protein of unknown function DUF2953 DOE78_23240 4ee6125792969e107b3a1cbbe5209fcb 396 Gene3D G3DSA:3.40.50.2000 210 390 1.2E-36 T 01-11-2018 DOE78_23240 4ee6125792969e107b3a1cbbe5209fcb 396 Pfam PF13439 Glycosyltransferase Family 4 61 203 2.7E-11 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_23240 4ee6125792969e107b3a1cbbe5209fcb 396 Pfam PF00534 Glycosyl transferases group 1 204 360 4.7E-34 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_23240 4ee6125792969e107b3a1cbbe5209fcb 396 SUPERFAMILY SSF53756 3 392 2.24E-67 T 01-11-2018 DOE78_12515 2fcf441d55f1269c14a2a5a08ccc99ba 168 Pfam PF00583 Acetyltransferase (GNAT) family 43 142 4.8E-15 T 01-11-2018 IPR000182 GNAT domain DOE78_12515 2fcf441d55f1269c14a2a5a08ccc99ba 168 Gene3D G3DSA:3.40.630.30 1 152 2.2E-28 T 01-11-2018 DOE78_12515 2fcf441d55f1269c14a2a5a08ccc99ba 168 SUPERFAMILY SSF55729 2 152 8.06E-25 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_21885 4acc1ed07712d90e9545b76b33c66720 418 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 123 410 4.3E-69 T 01-11-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 DOE78_21885 4acc1ed07712d90e9545b76b33c66720 418 Pfam PF08486 Stage II sporulation protein 117 200 2.7E-19 T 01-11-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal DOE78_21885 4acc1ed07712d90e9545b76b33c66720 418 ProDom PD191273 TC0311 EXPORTED CT041 CPN0389/CP0366/CPJ0389/CPB0400 95 190 0.005 T 01-11-2018 DOE78_07660 a2c5cf8d78cf003cbaf4739bd4d8c4b1 129 PIRSF PIRSF030092 1 128 2.1E-29 T 01-11-2018 IPR016945 Uncharacterised conserved protein UCP030092 DOE78_07660 a2c5cf8d78cf003cbaf4739bd4d8c4b1 129 Pfam PF11877 Protein of unknown function (DUF3397) 10 120 6.0E-31 T 01-11-2018 IPR024515 Protein of unknown function DUF3397 DOE78_15725 7155c10423e8a80459e3fd48cbf01ed3 137 Gene3D G3DSA:3.30.420.10 1 136 1.7E-31 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_15725 7155c10423e8a80459e3fd48cbf01ed3 137 Pfam PF13456 Reverse transcriptase-like 7 124 4.4E-18 T 01-11-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DOE78_15725 7155c10423e8a80459e3fd48cbf01ed3 137 SUPERFAMILY SSF53098 1 122 1.23E-30 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_07410 c76c2710f943f2750bb08762bd76dbef 61 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 1 56 2.0E-6 T 01-11-2018 IPR035211 Protein of unknown function DUF5325 DOE78_07410 c76c2710f943f2750bb08762bd76dbef 61 Pfam PF17259 Family of unknown function (DUF5325) 2 61 8.0E-27 T 01-11-2018 IPR035211 Protein of unknown function DUF5325 DOE78_20620 37ec34417217b893800de345389e772f 102 SMART SM00418 19 97 1.0E-30 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_20620 37ec34417217b893800de345389e772f 102 Pfam PF01022 Bacterial regulatory protein, arsR family 26 72 8.0E-18 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_20620 37ec34417217b893800de345389e772f 102 SUPERFAMILY SSF46785 8 100 1.54E-28 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_20620 37ec34417217b893800de345389e772f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 4.6E-16 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_20620 37ec34417217b893800de345389e772f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 4.6E-16 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_20620 37ec34417217b893800de345389e772f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 4.6E-16 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_20620 37ec34417217b893800de345389e772f 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 51 4.6E-16 T 01-11-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DOE78_20620 37ec34417217b893800de345389e772f 102 Gene3D G3DSA:1.10.10.10 1 101 3.4E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_12590 f59bce1f7e521770dbfe1f21c19f8019 294 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 231 285 1.7E-22 T 01-11-2018 IPR019264 Domain of unknown function DUF2179 DOE78_12590 f59bce1f7e521770dbfe1f21c19f8019 294 Gene3D G3DSA:3.30.70.120 202 278 7.8E-24 T 01-11-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DOE78_12590 f59bce1f7e521770dbfe1f21c19f8019 294 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 24 225 2.9E-66 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_12590 f59bce1f7e521770dbfe1f21c19f8019 294 PIRSF PIRSF006483 4 293 1.8E-96 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_22290 e6005fee9c1b1fae1f3d350934931113 303 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 26 294 2.4E-57 T 01-11-2018 IPR015402 Protein of unknown function DUF1980 DOE78_22290 e6005fee9c1b1fae1f3d350934931113 303 Pfam PF09323 Domain of unknown function (DUF1980) 9 206 6.8E-45 T 01-11-2018 IPR015402 Protein of unknown function DUF1980 DOE78_14280 5888fdcbed8bfbbb4acb36875d9dd255 189 Pfam PF05067 Manganese containing catalase 1 184 1.5E-75 T 01-11-2018 IPR007760 Manganese catalase DOE78_14280 5888fdcbed8bfbbb4acb36875d9dd255 189 Gene3D G3DSA:1.20.1260.10 1 184 5.7E-64 T 01-11-2018 IPR012347 Ferritin-like DOE78_14280 5888fdcbed8bfbbb4acb36875d9dd255 189 SUPERFAMILY SSF47240 1 185 7.26E-68 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_07635 aabe09aa3051c4d057bb8609132da3d0 155 Hamap MF_00824 Uncharacterized N-acetyltransferase . 2 149 41.05 T 01-11-2018 IPR017274 Putative N-acetyltransferase YlbP DOE78_07635 aabe09aa3051c4d057bb8609132da3d0 155 SUPERFAMILY SSF55729 30 138 8.97E-15 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_07635 aabe09aa3051c4d057bb8609132da3d0 155 PIRSF PIRSF037732 1 155 3.2E-79 T 01-11-2018 IPR017274 Putative N-acetyltransferase YlbP DOE78_07635 aabe09aa3051c4d057bb8609132da3d0 155 Gene3D G3DSA:3.40.630.30 2 155 6.9E-56 T 01-11-2018 DOE78_07635 aabe09aa3051c4d057bb8609132da3d0 155 Pfam PF00583 Acetyltransferase (GNAT) family 37 107 6.7E-7 T 01-11-2018 IPR000182 GNAT domain DOE78_15865 42aaa86512f438754591852342db4195 63 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 63 2.0E-5 T 01-11-2018 DOE78_15865 42aaa86512f438754591852342db4195 63 Pfam PF14178 YppF-like protein 2 58 2.4E-22 T 01-11-2018 IPR025553 YppF-like protein DOE78_06865 24ff3d165401973b2cbc0fe81ec95592 618 Gene3D G3DSA:1.10.760.10 411 535 5.2E-9 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_06865 24ff3d165401973b2cbc0fe81ec95592 618 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 392 449 8.1E-5 T 01-11-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase DOE78_06865 24ff3d165401973b2cbc0fe81ec95592 618 SUPERFAMILY SSF46626 414 618 1.6E-14 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_20270 9c66326288cf5d18dbc6d9c79d9b0ca6 413 Gene3D G3DSA:3.40.50.2000 1 205 2.8E-38 T 01-11-2018 DOE78_20270 9c66326288cf5d18dbc6d9c79d9b0ca6 413 Pfam PF13439 Glycosyltransferase Family 4 14 181 2.1E-32 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_20270 9c66326288cf5d18dbc6d9c79d9b0ca6 413 Gene3D G3DSA:3.40.50.2000 206 363 2.4E-33 T 01-11-2018 DOE78_20270 9c66326288cf5d18dbc6d9c79d9b0ca6 413 Pfam PF00534 Glycosyl transferases group 1 195 356 1.4E-30 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_20270 9c66326288cf5d18dbc6d9c79d9b0ca6 413 SUPERFAMILY SSF53756 1 378 2.04E-76 T 01-11-2018 DOE78_16290 7ef4c195d9f147f968079029ba5e7609 270 SUPERFAMILY SSF89550 1 264 1.96E-34 T 01-11-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DOE78_16290 7ef4c195d9f147f968079029ba5e7609 270 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 244 2.7E-36 T 01-11-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 DOE78_16290 7ef4c195d9f147f968079029ba5e7609 270 Gene3D G3DSA:3.20.20.140 2 269 2.8E-62 T 01-11-2018 DOE78_22725 0b91f90f7512f64fcff1f3c11e7760a4 105 SUPERFAMILY SSF46626 1 103 6.02E-16 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_22725 0b91f90f7512f64fcff1f3c11e7760a4 105 Gene3D G3DSA:1.10.760.10 36 105 7.8E-28 T 01-11-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DOE78_22725 0b91f90f7512f64fcff1f3c11e7760a4 105 PIRSF PIRSF000025 1 105 1.5E-28 T 01-11-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 DOE78_22725 0b91f90f7512f64fcff1f3c11e7760a4 105 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 36 101 3.1E-12 T 01-11-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_09185 d95674739b15807b47c8d2f04fd925a6 257 Pfam PF09339 IclR helix-turn-helix domain 13 64 9.8E-11 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DOE78_09185 d95674739b15807b47c8d2f04fd925a6 257 Gene3D G3DSA:3.30.450.40 85 257 7.7E-60 T 01-11-2018 IPR029016 GAF-like domain superfamily DOE78_09185 d95674739b15807b47c8d2f04fd925a6 257 SUPERFAMILY SSF55781 69 256 2.01E-52 T 01-11-2018 DOE78_09185 d95674739b15807b47c8d2f04fd925a6 257 SMART SM00346 11 101 6.9E-16 T 01-11-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DOE78_09185 d95674739b15807b47c8d2f04fd925a6 257 Pfam PF01614 Bacterial transcriptional regulator 129 252 1.4E-36 T 01-11-2018 IPR014757 Transcription regulator IclR, C-terminal DOE78_09185 d95674739b15807b47c8d2f04fd925a6 257 SUPERFAMILY SSF46785 12 82 9.56E-14 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_09185 d95674739b15807b47c8d2f04fd925a6 257 Gene3D G3DSA:1.10.10.10 9 84 1.1E-19 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_23950 70b2c4f90783d978f3f460ec49bce922 432 Pfam PF01966 HD domain 61 181 5.7E-16 T 01-11-2018 IPR006674 HD domain DOE78_23950 70b2c4f90783d978f3f460ec49bce922 432 SMART SM00471 57 187 1.6E-10 T 01-11-2018 IPR003607 HD/PDEase domain DOE78_23950 70b2c4f90783d978f3f460ec49bce922 432 Gene3D G3DSA:1.20.1250.30 235 412 1.3E-167 T 01-11-2018 DOE78_23950 70b2c4f90783d978f3f460ec49bce922 432 SUPERFAMILY SSF109604 6 414 2.47E-121 T 01-11-2018 DOE78_23950 70b2c4f90783d978f3f460ec49bce922 432 Gene3D G3DSA:1.10.3210.10 11 401 1.3E-167 T 01-11-2018 DOE78_05210 ce9a2a8728514164452b6e63d0c635c2 360 Pfam PF06081 Aromatic acid exporter family member 1 1 142 4.5E-40 T 01-11-2018 IPR010343 Aromatic acid exporter family member 1 DOE78_10185 d62c24d912a03fc7e29dfbaba2ff842e 93 Pfam PF13133 Protein of unknown function (DUF3949) 20 83 4.3E-25 T 01-11-2018 IPR025032 Protein of unknown function DUF3949 DOE78_14760 70f61d013fdf772f5fdd2a9adfe45ff1 296 Pfam PF04294 VanW like protein 151 278 1.1E-49 T 01-11-2018 IPR007391 Vancomycin resistance VanW DOE78_09840 383147dc795b3ece0df1d3fa307c87a2 151 Pfam PF04463 Protein of unknown function (DUF523) 2 145 2.5E-44 T 01-11-2018 IPR007553 Domain of unknown function DUF523 DOE78_02115 2645a899a4cde9a7123ee43e8527127b 427 Pfam PF03600 Citrate transporter 19 371 1.8E-14 T 01-11-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DOE78_05105 08661e3d5bf0cad2d17ad6bc8bbb3e1d 56 ProDom PD053407 YFHD 6 36 1.0E-6 T 01-11-2018 DOE78_05105 08661e3d5bf0cad2d17ad6bc8bbb3e1d 56 Pfam PF14151 YfhD-like protein 4 49 6.7E-25 T 01-11-2018 IPR025435 YfhD-like protein DOE78_00360 3560fade78f80a5967be5525ab42ecfa 210 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 124 1.8E-41 T 01-11-2018 IPR014242 Spore cortex biosynthesis protein, YabQ DOE78_00360 3560fade78f80a5967be5525ab42ecfa 210 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 12 87 8.3E-22 T 01-11-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like DOE78_03130 e52cdc01a714eb8298f41d1bd9a3ce39 240 PIRSF PIRSF039085 1 240 6.6E-118 T 01-11-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DOE78_03130 e52cdc01a714eb8298f41d1bd9a3ce39 240 SMART SM00382 26 221 2.4E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_03130 e52cdc01a714eb8298f41d1bd9a3ce39 240 SUPERFAMILY SSF52540 1 235 1.61E-81 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_03130 e52cdc01a714eb8298f41d1bd9a3ce39 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_03130 e52cdc01a714eb8298f41d1bd9a3ce39 240 Pfam PF00005 ABC transporter 17 165 1.5E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_03130 e52cdc01a714eb8298f41d1bd9a3ce39 240 Gene3D G3DSA:3.40.50.300 1 240 9.0E-82 T 01-11-2018 DOE78_13040 95536fd6c1c4c4d1a348bcf46450922d 204 Gene3D G3DSA:3.20.20.70 4 202 1.6E-49 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_13040 95536fd6c1c4c4d1a348bcf46450922d 204 Pfam PF02581 Thiamine monophosphate synthase 11 182 3.6E-34 T 01-11-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_13040 95536fd6c1c4c4d1a348bcf46450922d 204 SUPERFAMILY SSF51391 22 197 8.5E-40 T 01-11-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DOE78_01565 36dbbe276915e0693e5496c2496be4f5 469 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 458 1.3E-196 T 01-11-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 DOE78_01565 36dbbe276915e0693e5496c2496be4f5 469 Pfam PF03553 Na+/H+ antiporter family 159 451 4.4E-64 T 01-11-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DOE78_04025 d2f79f51d0c8801ec8433ec926e86c36 325 Gene3D G3DSA:1.20.1530.20 1 307 1.4E-116 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily DOE78_04025 d2f79f51d0c8801ec8433ec926e86c36 325 Pfam PF01758 Sodium Bile acid symporter family 41 220 1.3E-46 T 01-11-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DOE78_23930 23080f7b0433b27c143f3ab32e26496b 169 Pfam PF08741 YwhD family 6 167 2.7E-84 T 01-11-2018 IPR014852 Uncharacterised protein YwhD DOE78_21890 674c52f24a2fdbe30dae746a816b0baf 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 122 6.3E-11 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_21890 674c52f24a2fdbe30dae746a816b0baf 129 SUPERFAMILY SSF54593 4 123 1.48E-22 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_21890 674c52f24a2fdbe30dae746a816b0baf 129 Gene3D G3DSA:3.10.180.10 8 124 2.5E-26 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_14790 f8eacb9d96ea479641039e1e581d0a21 315 Pfam PF12679 ABC-2 family transporter protein 4 313 4.9E-22 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 Gene3D G3DSA:3.60.20.10 12 457 3.8E-168 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 SUPERFAMILY SSF53271 246 462 4.59E-76 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 Gene3D G3DSA:3.40.50.2020 270 434 3.8E-168 T 01-11-2018 DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 456 3.6E-166 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 Pfam PF13522 Glutamine amidotransferase domain 73 204 6.8E-22 T 01-11-2018 DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 Pfam PF00156 Phosphoribosyl transferase domain 278 383 2.5E-8 T 01-11-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 455 46.932 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 PIRSF PIRSF000485 8 469 1.5E-184 T 01-11-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DOE78_01860 b62d788c0874def187ab6b9cc1c057dd 470 SUPERFAMILY SSF56235 12 235 9.44E-69 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_06230 e401b4b7ffae2f1b9512844ba3b7bea5 186 ProDom PD106196 YISN IG BH1722 5 178 5.0E-34 T 01-11-2018 IPR024488 Protein of unknown function DUF2777 DOE78_06230 e401b4b7ffae2f1b9512844ba3b7bea5 186 Pfam PF10949 Protein of unknown function (DUF2777) 4 183 4.0E-72 T 01-11-2018 IPR024488 Protein of unknown function DUF2777 DOE78_02780 fff1fa4646f8d85ee652f8ae6559a291 650 Pfam PF02687 FtsX-like permease family 85 177 8.7E-7 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_02780 fff1fa4646f8d85ee652f8ae6559a291 650 PIRSF PIRSF018968 1 650 8.4E-158 T 01-11-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 Gene3D G3DSA:3.40.50.720 1 246 2.7E-93 T 01-11-2018 DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 2.6E-4 T 01-11-2018 DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 SUPERFAMILY SSF51735 4 246 1.57E-92 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.0E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.0E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.0E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.0E-50 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.1E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.1E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.1E-14 T 01-11-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 01-11-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 8.0E-76 T 01-11-2018 DOE78_06145 fb8d254eee1844df266ab270f9c713e4 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.4E-90 T 01-11-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DOE78_12245 8454ee9eab1cf0476c6d7f8940f01181 357 Pfam PF13367 Protease prsW family 190 335 2.9E-20 T 01-11-2018 IPR026898 Protease PrsW GO:0008233 DOE78_03495 441abd1f62ce95758da6968452d4c0de 274 Pfam PF14167 YfkD-like protein 43 274 6.3E-123 T 01-11-2018 IPR025548 YfkD-like protein DOE78_08135 7f002ea2e9c88a42af9d6addbc187926 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 180 41.624 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DOE78_08135 7f002ea2e9c88a42af9d6addbc187926 180 Pfam PF00227 Proteasome subunit 5 178 5.1E-25 T 01-11-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DOE78_08135 7f002ea2e9c88a42af9d6addbc187926 180 PIRSF PIRSF039093 1 180 2.2E-84 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DOE78_08135 7f002ea2e9c88a42af9d6addbc187926 180 SUPERFAMILY SSF56235 3 179 9.97E-60 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_08135 7f002ea2e9c88a42af9d6addbc187926 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 180 1.0E-83 T 01-11-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DOE78_08135 7f002ea2e9c88a42af9d6addbc187926 180 Gene3D G3DSA:3.60.20.10 2 180 1.4E-68 T 01-11-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DOE78_20390 22dc231820716dcb235ed5b4a3bbff8c 144 Pfam PF00717 Peptidase S24-like 26 78 7.3E-6 T 01-11-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DOE78_20390 22dc231820716dcb235ed5b4a3bbff8c 144 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 11 134 7.7E-16 T 01-11-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 DOE78_20765 e047b4fc95cd04a5bd2bacc26a018fc5 132 Pfam PF00575 S1 RNA binding domain 4 77 1.6E-20 T 01-11-2018 IPR003029 S1 domain GO:0003676 DOE78_20765 e047b4fc95cd04a5bd2bacc26a018fc5 132 SMART SM00316 6 77 9.6E-27 T 01-11-2018 IPR022967 RNA-binding domain, S1 DOE78_20765 e047b4fc95cd04a5bd2bacc26a018fc5 132 Gene3D G3DSA:2.40.50.140 2 86 4.4E-32 T 01-11-2018 DOE78_20765 e047b4fc95cd04a5bd2bacc26a018fc5 132 SUPERFAMILY SSF50249 6 85 4.93E-25 T 01-11-2018 IPR012340 Nucleic acid-binding, OB-fold DOE78_01545 d046e353918dc4a0d668442033c518d8 473 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 436 2.4E-151 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_01545 d046e353918dc4a0d668442033c518d8 473 PRINTS PR00175 Sodium/alanine symporter signature 345 367 8.2E-58 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_01545 d046e353918dc4a0d668442033c518d8 473 PRINTS PR00175 Sodium/alanine symporter signature 210 229 8.2E-58 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_01545 d046e353918dc4a0d668442033c518d8 473 PRINTS PR00175 Sodium/alanine symporter signature 92 114 8.2E-58 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_01545 d046e353918dc4a0d668442033c518d8 473 PRINTS PR00175 Sodium/alanine symporter signature 182 200 8.2E-58 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_01545 d046e353918dc4a0d668442033c518d8 473 PRINTS PR00175 Sodium/alanine symporter signature 405 425 8.2E-58 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_01545 d046e353918dc4a0d668442033c518d8 473 PRINTS PR00175 Sodium/alanine symporter signature 301 319 8.2E-58 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_01545 d046e353918dc4a0d668442033c518d8 473 Pfam PF01235 Sodium:alanine symporter family 58 448 6.3E-158 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_07490 e2be9bc42499a0ae517916e75fe0a0cf 209 Gene3D G3DSA:1.20.120.80 21 208 8.6E-51 T 01-11-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07490 e2be9bc42499a0ae517916e75fe0a0cf 209 SUPERFAMILY SSF81452 22 206 4.71E-54 T 01-11-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_07490 e2be9bc42499a0ae517916e75fe0a0cf 209 Pfam PF00510 Cytochrome c oxidase subunit III 28 206 1.9E-17 T 01-11-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_23880 d0c5cc7b21cbbb8623858d3d21bea3b7 702 Pfam PF02754 Cysteine-rich domain 459 542 1.9E-7 T 01-11-2018 IPR004017 Cysteine-rich domain DOE78_23880 d0c5cc7b21cbbb8623858d3d21bea3b7 702 Pfam PF02754 Cysteine-rich domain 581 668 1.8E-17 T 01-11-2018 IPR004017 Cysteine-rich domain DOE78_23880 d0c5cc7b21cbbb8623858d3d21bea3b7 702 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_23880 d0c5cc7b21cbbb8623858d3d21bea3b7 702 SUPERFAMILY SSF103501 7 239 3.14E-17 T 01-11-2018 IPR036197 NarG-like superfamily DOE78_23880 d0c5cc7b21cbbb8623858d3d21bea3b7 702 Pfam PF13183 4Fe-4S dicluster domain 274 383 3.5E-12 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_23880 d0c5cc7b21cbbb8623858d3d21bea3b7 702 SUPERFAMILY SSF46548 252 399 1.92E-20 T 01-11-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DOE78_10505 6f89c158d6103d63a9630048d80a3ba7 209 PIRSF PIRSF020606 1 206 2.5E-65 T 01-11-2018 IPR014509 Uncharacterised conserved protein UCP020606 DOE78_10505 6f89c158d6103d63a9630048d80a3ba7 209 Pfam PF09997 Predicted membrane protein (DUF2238) 43 183 5.3E-52 T 01-11-2018 IPR014509 Uncharacterised conserved protein UCP020606 DOE78_02900 b3bf49b54805a8899a53f7b65d24c34c 399 Pfam PF12698 ABC-2 family transporter protein 20 393 2.3E-38 T 01-11-2018 DOE78_08540 a7981e325e41786167c0280861c93807 305 Gene3D G3DSA:1.10.260.40 1 99 9.0E-29 T 01-11-2018 DOE78_08540 a7981e325e41786167c0280861c93807 305 Pfam PF13464 Domain of unknown function (DUF4115) 219 292 2.6E-7 T 01-11-2018 IPR025194 Domain of unknown function DUF4115 DOE78_08540 a7981e325e41786167c0280861c93807 305 Pfam PF13413 Helix-turn-helix domain 8 68 4.4E-23 T 01-11-2018 DOE78_08540 a7981e325e41786167c0280861c93807 305 SUPERFAMILY SSF47413 3 75 7.39E-7 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_01340 35543780295c046c63141daec232684b 116 Gene3D G3DSA:2.30.30.110 1 116 2.5E-53 T 01-11-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DOE78_01340 35543780295c046c63141daec232684b 116 SUPERFAMILY SSF50118 2 113 5.23E-42 T 01-11-2018 DOE78_01340 35543780295c046c63141daec232684b 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 1.5E-33 T 01-11-2018 IPR003477 mRNA interferase PemK-like GO:0003677 DOE78_01340 35543780295c046c63141daec232684b 116 PIRSF PIRSF033490 1 113 9.4E-41 T 01-11-2018 IPR003477 mRNA interferase PemK-like GO:0003677 DOE78_05235 45ee33680d8d6195a8478eeaa2f7f750 261 Pfam PF06182 ABC-2 family transporter protein 33 260 1.8E-54 T 01-11-2018 IPR010390 Protein of unknown function DUF990 DOE78_11880 4ce3eeeda528835e48d87e51f89eb2a8 276 Gene3D G3DSA:1.10.3720.10 3 263 6.5E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11880 4ce3eeeda528835e48d87e51f89eb2a8 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 269 3.6E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_11880 4ce3eeeda528835e48d87e51f89eb2a8 276 SUPERFAMILY SSF161098 7 276 7.38E-66 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06215 01ed614c2679bd44cb4b218bb8e0fe6c 391 Pfam PF04235 Protein of unknown function (DUF418) 226 379 1.3E-39 T 01-11-2018 IPR007349 Domain of unknown function DUF418 DOE78_23685 535a236021e25357835d0d262c8327dd 285 Pfam PF00231 ATP synthase 3 284 1.8E-98 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 Gene3D G3DSA:1.10.287.80 6 280 1.4E-102 T 01-11-2018 DOE78_23685 535a236021e25357835d0d262c8327dd 285 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 284 8.2E-110 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 PRINTS PR00126 ATP synthase gamma subunit signature 262 283 2.2E-39 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.2E-39 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 PRINTS PR00126 ATP synthase gamma subunit signature 231 250 2.2E-39 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.2E-39 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 284 35.899 T 01-11-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 SUPERFAMILY SSF52943 2 284 5.2E-93 T 01-11-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_23685 535a236021e25357835d0d262c8327dd 285 Gene3D G3DSA:3.40.1380.10 61 203 1.4E-102 T 01-11-2018 DOE78_23685 535a236021e25357835d0d262c8327dd 285 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 270 283 - T 01-11-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 SUPERFAMILY SSF46689 55 104 1.16E-8 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 Gene3D G3DSA:1.10.10.60 53 107 2.8E-9 T 01-11-2018 DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 Gene3D G3DSA:3.20.80.10 124 288 5.5E-32 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 SMART SM00342 19 101 1.3E-16 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 Gene3D G3DSA:1.10.10.60 2 52 6.0E-16 T 01-11-2018 DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 SMART SM00871 124 284 1.9E-17 T 01-11-2018 IPR010499 Bacterial transcription activator, effector binding DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 Pfam PF06445 GyrI-like small molecule binding domain 124 284 3.0E-26 T 01-11-2018 IPR029442 GyrI-like small molecule binding domain DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 Pfam PF12833 Helix-turn-helix domain 26 102 1.8E-16 T 01-11-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 SUPERFAMILY SSF55136 124 286 4.45E-21 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_24540 4fb7fe86bc4b29a69aee8bd0b7b769cb 289 SUPERFAMILY SSF46689 5 53 1.12E-7 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 SUPERFAMILY SSF52540 324 572 3.15E-91 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 Pfam PF00005 ABC transporter 353 501 2.2E-31 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 Gene3D G3DSA:3.40.50.300 332 583 1.4E-88 T 01-11-2018 DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 SUPERFAMILY SSF90123 5 318 4.19E-80 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 Pfam PF00664 ABC transporter transmembrane region 22 288 2.7E-51 T 01-11-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 Gene3D G3DSA:1.20.1560.10 1 321 3.5E-88 T 01-11-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_07300 9ccf51088faf45bf7e0807103bd23b85 584 SMART SM00382 361 553 1.0E-14 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_01085 c3bf1d0d77ccffaad99ec914c3edac9a 75 SUPERFAMILY SSF64307 3 75 2.75E-26 T 01-11-2018 IPR036868 TusA-like domain superfamily DOE78_01085 c3bf1d0d77ccffaad99ec914c3edac9a 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 01-11-2018 IPR001455 TusA-like domain DOE78_01085 c3bf1d0d77ccffaad99ec914c3edac9a 75 Pfam PF01206 Sulfurtransferase TusA 5 74 2.3E-25 T 01-11-2018 IPR001455 TusA-like domain DOE78_01085 c3bf1d0d77ccffaad99ec914c3edac9a 75 Gene3D G3DSA:3.30.110.40 1 75 5.3E-31 T 01-11-2018 IPR036868 TusA-like domain superfamily DOE78_03145 ab5c7d358ed51586214d0e8cfd54eb72 147 Pfam PF12821 Threonine/Serine exporter, ThrE 7 134 2.7E-37 T 01-11-2018 IPR024528 Threonine/Serine exporter, ThrE DOE78_08940 2c4b569c7535e8077a4c9d5bd4934c50 281 Gene3D G3DSA:1.10.3720.10 1 268 3.9E-61 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08940 2c4b569c7535e8077a4c9d5bd4934c50 281 SUPERFAMILY SSF161098 8 281 2.15E-67 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08940 2c4b569c7535e8077a4c9d5bd4934c50 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 272 2.5E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12600 95ee121577d112ee67a5d7e79ab5c303 487 Pfam PF02080 TrkA-C domain 416 482 1.8E-12 T 01-11-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DOE78_12600 95ee121577d112ee67a5d7e79ab5c303 487 Gene3D G3DSA:3.30.70.1450 403 487 4.5E-17 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_12600 95ee121577d112ee67a5d7e79ab5c303 487 Pfam PF00999 Sodium/hydrogen exchanger family 9 386 1.7E-60 T 01-11-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DOE78_12600 95ee121577d112ee67a5d7e79ab5c303 487 SUPERFAMILY SSF116726 407 482 9.81E-14 T 01-11-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DOE78_12600 95ee121577d112ee67a5d7e79ab5c303 487 Gene3D G3DSA:1.20.1530.20 7 387 1.5E-25 T 01-11-2018 IPR038770 Sodium/solute symporter superfamily DOE78_04505 05a6b9148ddf98108f8a3de033449244 363 PIRSF PIRSF031512 50 363 1.2E-7 T 01-11-2018 IPR014565 Exopolysaccharide biosynthesis, EpsL, firmicutes DOE78_04505 05a6b9148ddf98108f8a3de033449244 363 Pfam PF09992 Phosphodiester glycosidase 181 362 2.1E-39 T 01-11-2018 IPR018711 Phosphodiester glycosidase DOE78_12120 89c7d5bed66476c481fde88ca5b87792 260 Pfam PF13468 Glyoxalase-like domain 6 197 1.9E-35 T 01-11-2018 IPR025870 Glyoxalase-like domain DOE78_12120 89c7d5bed66476c481fde88ca5b87792 260 SUPERFAMILY SSF54593 4 236 1.81E-8 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_12120 89c7d5bed66476c481fde88ca5b87792 260 Gene3D G3DSA:3.10.180.10 3 161 5.3E-50 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_07160 f5e0f1901e1c4191f6ea734777b8a04e 127 Pfam PF07238 PilZ domain 29 108 2.0E-5 T 01-11-2018 IPR009875 PilZ domain GO:0035438 DOE78_17830 18ad0ddf612d9184079093d87e725acb 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 43 61 1.4E-14 T 01-11-2018 IPR003849 Preprotein translocase YajC DOE78_17830 18ad0ddf612d9184079093d87e725acb 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 1.4E-14 T 01-11-2018 IPR003849 Preprotein translocase YajC DOE78_17830 18ad0ddf612d9184079093d87e725acb 93 SMART SM01323 3 85 4.9E-42 T 01-11-2018 IPR003849 Preprotein translocase YajC DOE78_17830 18ad0ddf612d9184079093d87e725acb 93 Pfam PF02699 Preprotein translocase subunit 8 82 1.3E-28 T 01-11-2018 IPR003849 Preprotein translocase YajC DOE78_17830 18ad0ddf612d9184079093d87e725acb 93 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 5 85 7.7E-31 T 01-11-2018 IPR003849 Preprotein translocase YajC DOE78_10395 e0425d1ffc406577ab93c9f41150d867 152 SUPERFAMILY SSF109854 2 151 1.37E-21 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_10395 e0425d1ffc406577ab93c9f41150d867 152 Gene3D G3DSA:1.20.120.450 1 152 3.9E-13 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_10395 e0425d1ffc406577ab93c9f41150d867 152 Pfam PF12867 DinB superfamily 11 145 3.4E-14 T 01-11-2018 IPR024775 DinB-like domain DOE78_02690 52cc56b19098bd6b1e4449dcc1ab8300 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 44 157 3.4E-9 T 01-11-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DOE78_02690 52cc56b19098bd6b1e4449dcc1ab8300 177 Gene3D G3DSA:3.40.50.1240 1 176 8.4E-12 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_02690 52cc56b19098bd6b1e4449dcc1ab8300 177 SUPERFAMILY SSF53254 44 176 4.07E-14 T 01-11-2018 IPR029033 Histidine phosphatase superfamily DOE78_24340 73d554cadcac924493e4264aedeb516d 227 Pfam PF16316 Domain of unknown function (DUF4956) 39 137 1.4E-10 T 01-11-2018 IPR032531 Protein of unknown function DUF4956 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 SUPERFAMILY SSF53720 6 414 1.15E-111 T 01-11-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 Gene3D G3DSA:3.40.605.10 17 409 3.0E-168 T 01-11-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 343 - T 01-11-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 PIRSF PIRSF000151 1 415 1.4E-181 T 01-11-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 42.001 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 15 404 2.6E-167 T 01-11-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 Pfam PF00171 Aldehyde dehydrogenase family 37 290 4.2E-13 T 01-11-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DOE78_24415 21716aadf300fed875a1a551cda79a5f 415 Gene3D G3DSA:3.40.309.10 224 372 3.0E-168 T 01-11-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DOE78_05225 4793cb14a13c2bc0622e8dd5d4efd879 335 SMART SM00382 50 234 1.9E-11 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_05225 4793cb14a13c2bc0622e8dd5d4efd879 335 SUPERFAMILY SSF52540 35 250 5.23E-57 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05225 4793cb14a13c2bc0622e8dd5d4efd879 335 Gene3D G3DSA:3.40.50.300 5 299 2.7E-59 T 01-11-2018 DOE78_05225 4793cb14a13c2bc0622e8dd5d4efd879 335 Pfam PF00005 ABC transporter 42 185 1.9E-30 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_18935 aed18b1428a4eaf6379c14f3fe51c3c0 236 SUPERFAMILY SSF53335 1 235 6.64E-25 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_18935 aed18b1428a4eaf6379c14f3fe51c3c0 236 Gene3D G3DSA:3.40.50.150 1 109 1.9E-27 T 01-11-2018 DOE78_18935 aed18b1428a4eaf6379c14f3fe51c3c0 236 Pfam PF00145 C-5 cytosine-specific DNA methylase 170 235 4.4E-5 T 01-11-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DOE78_18935 aed18b1428a4eaf6379c14f3fe51c3c0 236 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 58 2.8E-14 T 01-11-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DOE78_10305 cd13e1588d17bad648cc4bca3fc2efed 261 Pfam PF02517 CAAX protease self-immunity 161 252 1.3E-16 T 01-11-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DOE78_10010 5a123781e972e0159ce641882ea4cb63 105 SUPERFAMILY SSF54909 4 99 2.35E-16 T 01-11-2018 IPR011008 Dimeric alpha-beta barrel DOE78_10010 5a123781e972e0159ce641882ea4cb63 105 Gene3D G3DSA:3.30.70.100 1 103 2.9E-18 T 01-11-2018 DOE78_10010 5a123781e972e0159ce641882ea4cb63 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 72 6.0E-10 T 01-11-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DOE78_04730 f94a935cc963b160a194b0137208aee3 107 Pfam PF14282 FlxA-like protein 7 87 4.3E-11 T 01-11-2018 IPR025577 FlxA-like protein DOE78_07070 9ce3f8f930d1ea16dbd0645296cfd318 431 Pfam PF12831 FAD dependent oxidoreductase 6 147 1.8E-8 T 01-11-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal DOE78_07070 9ce3f8f930d1ea16dbd0645296cfd318 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 3.7E-8 T 01-11-2018 DOE78_07070 9ce3f8f930d1ea16dbd0645296cfd318 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.7E-8 T 01-11-2018 DOE78_07070 9ce3f8f930d1ea16dbd0645296cfd318 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 3.7E-8 T 01-11-2018 DOE78_07070 9ce3f8f930d1ea16dbd0645296cfd318 431 Gene3D G3DSA:3.50.50.60 2 430 1.8E-76 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_07070 9ce3f8f930d1ea16dbd0645296cfd318 431 SUPERFAMILY SSF51905 1 382 3.85E-42 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_07070 9ce3f8f930d1ea16dbd0645296cfd318 431 SUPERFAMILY SSF54373 182 284 2.24E-16 T 01-11-2018 DOE78_03915 37bc1d96358fc48efec5cf05294f7312 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 7 473 45.755 T 01-11-2018 IPR003846 Uncharacterised protein family UPF0061 DOE78_03915 37bc1d96358fc48efec5cf05294f7312 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 10 457 1.6E-121 T 01-11-2018 IPR003846 Uncharacterised protein family UPF0061 DOE78_15560 dd23fb7de8e272b5d9b59e7d99c25ad6 196 Pfam PF14005 YpjP-like protein 64 194 2.3E-57 T 01-11-2018 IPR025616 YpjP-like protein DOE78_21080 4ece4dc9a7d12c404f3807dac011da85 320 SUPERFAMILY SSF51261 120 306 6.28E-34 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_21080 4ece4dc9a7d12c404f3807dac011da85 320 Gene3D G3DSA:2.70.70.10 133 318 1.3E-54 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_21080 4ece4dc9a7d12c404f3807dac011da85 320 Pfam PF01551 Peptidase family M23 195 293 9.9E-20 T 01-11-2018 IPR016047 Peptidase M23 DOE78_06640 a7587e096f60fdf299714526230c2787 222 Pfam PF05389 Negative regulator of genetic competence (MecA) 2 216 6.3E-51 T 01-11-2018 IPR008681 Negative regulator of genetic competence, MecA DOE78_06640 a7587e096f60fdf299714526230c2787 222 Gene3D G3DSA:3.30.70.1950 123 222 4.8E-30 T 01-11-2018 IPR038471 MecA, C-terminal domain superfamily DOE78_06640 a7587e096f60fdf299714526230c2787 222 PIRSF PIRSF029008 1 222 4.3E-76 T 01-11-2018 IPR008681 Negative regulator of genetic competence, MecA DOE78_06640 a7587e096f60fdf299714526230c2787 222 Hamap MF_01124 Adapter protein MecA [mecA]. 1 221 28.07 T 01-11-2018 IPR008681 Negative regulator of genetic competence, MecA DOE78_02530 8cf6f0a040bd01698e417d00d9c0a136 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 315 4.9E-44 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_14660 16e4e9bf59f5873023971eb591ede973 96 Pfam PF06803 Protein of unknown function (DUF1232) 39 71 5.0E-9 T 01-11-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 DOE78_17165 ba81762d7e2eb8037e4ae7646318e1ba 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.892 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17165 ba81762d7e2eb8037e4ae7646318e1ba 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 8.2E-21 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17165 ba81762d7e2eb8037e4ae7646318e1ba 49 Gene3D G3DSA:2.20.28.120 1 49 1.7E-24 T 01-11-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_17165 ba81762d7e2eb8037e4ae7646318e1ba 49 SUPERFAMILY SSF57829 1 49 1.53E-19 T 01-11-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DOE78_17165 ba81762d7e2eb8037e4ae7646318e1ba 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 01-11-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DOE78_17165 ba81762d7e2eb8037e4ae7646318e1ba 49 Pfam PF00471 Ribosomal protein L33 3 49 2.0E-23 T 01-11-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DOE78_03420 38ee14c367af94c9ab9d18c7dfeb2d00 44 Pfam PF08671 Anti-repressor SinI 12 37 1.3E-10 T 01-11-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 DOE78_03420 38ee14c367af94c9ab9d18c7dfeb2d00 44 SUPERFAMILY SSF47406 11 38 9.81E-9 T 01-11-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 DOE78_18205 3b7c0032473e6d463a7b277c9a05056c 154 Gene3D G3DSA:3.10.129.10 8 149 1.5E-33 T 01-11-2018 DOE78_18205 3b7c0032473e6d463a7b277c9a05056c 154 Pfam PF03061 Thioesterase superfamily 33 118 6.3E-12 T 01-11-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DOE78_18205 3b7c0032473e6d463a7b277c9a05056c 154 SUPERFAMILY SSF54637 15 147 3.38E-32 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_20410 bb40d2865f35db6e3cb7f7913da85be7 238 PIRSF PIRSF000883 1 237 1.9E-64 T 01-11-2018 IPR011152 Phosphoesterase MJ0912 DOE78_20410 bb40d2865f35db6e3cb7f7913da85be7 238 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 197 4.0E-28 T 01-11-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DOE78_20410 bb40d2865f35db6e3cb7f7913da85be7 238 SUPERFAMILY SSF56300 1 228 6.51E-54 T 01-11-2018 DOE78_20410 bb40d2865f35db6e3cb7f7913da85be7 238 Gene3D G3DSA:3.60.21.10 1 237 3.4E-62 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_02760 d1aa4f2509587242380e432a1f75c9fc 284 Gene3D G3DSA:1.10.3720.10 37 283 1.3E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02760 d1aa4f2509587242380e432a1f75c9fc 284 SUPERFAMILY SSF161098 41 269 3.79E-49 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02760 d1aa4f2509587242380e432a1f75c9fc 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 269 1.3E-9 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_03055 4188635eb9beba3d62fbb0b7835c6ec1 255 Pfam PF08378 Nuclease-related domain 3 80 1.7E-10 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_17130 2d950b1fb416939bbeed50ae8cb0a392 66 Gene3D G3DSA:1.10.287.760 1 66 6.8E-28 T 01-11-2018 IPR023164 YqgQ-like superfamily DOE78_17130 2d950b1fb416939bbeed50ae8cb0a392 66 SUPERFAMILY SSF158379 1 60 1.57E-23 T 01-11-2018 IPR023164 YqgQ-like superfamily DOE78_17130 2d950b1fb416939bbeed50ae8cb0a392 66 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 1.5E-28 T 01-11-2018 IPR009256 Protein of unknown function DUF910 DOE78_20490 b8d664a6bb7f150f2d47b0598084e5cc 359 Gene3D G3DSA:3.40.50.720 3 273 6.7E-142 T 01-11-2018 DOE78_20490 b8d664a6bb7f150f2d47b0598084e5cc 359 SUPERFAMILY SSF51735 3 336 6.2E-89 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_20490 b8d664a6bb7f150f2d47b0598084e5cc 359 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 334 1.8E-137 T 01-11-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DOE78_20490 b8d664a6bb7f150f2d47b0598084e5cc 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 1.7E-58 T 01-11-2018 IPR016040 NAD(P)-binding domain DOE78_20490 b8d664a6bb7f150f2d47b0598084e5cc 359 Gene3D G3DSA:3.90.25.10 193 328 6.7E-142 T 01-11-2018 DOE78_04925 f211af4c06b29eb028e698eb81f47556 426 TIGRFAM TIGR00836 amt: ammonium transporter 11 402 2.4E-118 T 01-11-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DOE78_04925 f211af4c06b29eb028e698eb81f47556 426 Gene3D G3DSA:1.10.3430.10 1 420 1.4E-133 T 01-11-2018 IPR029020 Ammonium/urea transporter DOE78_04925 f211af4c06b29eb028e698eb81f47556 426 SUPERFAMILY SSF111352 8 384 1.27E-103 T 01-11-2018 DOE78_04925 f211af4c06b29eb028e698eb81f47556 426 Pfam PF00909 Ammonium Transporter Family 14 400 3.1E-111 T 01-11-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DOE78_04925 f211af4c06b29eb028e698eb81f47556 426 ProSitePatterns PS01219 Ammonium transporters signature. 160 185 - T 01-11-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DOE78_23390 874cc4ad402252fd09dbaeb2ba90c718 260 Pfam PF09000 Cytotoxic 205 259 4.0E-11 T 01-11-2018 IPR009105 Colicin E3-like ribonuclease domain GO:0003723|GO:0009405|GO:0016788|GO:0043022 DOE78_23390 874cc4ad402252fd09dbaeb2ba90c718 260 SUPERFAMILY SSF63840 198 259 3.4E-14 T 01-11-2018 IPR036725 Colicin E3-like ribonuclease domain superfamily GO:0003723|GO:0009405|GO:0016788|GO:0043022 DOE78_23390 874cc4ad402252fd09dbaeb2ba90c718 260 Gene3D G3DSA:3.10.380.10 169 260 5.7E-18 T 01-11-2018 IPR036725 Colicin E3-like ribonuclease domain superfamily GO:0003723|GO:0009405|GO:0016788|GO:0043022 DOE78_02840 253c8db94f9cda2e3022d650681000e2 286 SUPERFAMILY SSF46689 3 65 8.21E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02840 253c8db94f9cda2e3022d650681000e2 286 Gene3D G3DSA:1.10.357.10 1 173 4.4E-27 T 01-11-2018 DOE78_02840 253c8db94f9cda2e3022d650681000e2 286 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 01-11-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DOE78_02840 253c8db94f9cda2e3022d650681000e2 286 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.4E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_02840 253c8db94f9cda2e3022d650681000e2 286 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.4E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_02840 253c8db94f9cda2e3022d650681000e2 286 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 3.3E-14 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_23285 b65e3e5d6118eb42c308508c40953cda 224 Pfam PF02397 Bacterial sugar transferase 30 218 2.5E-71 T 01-11-2018 IPR003362 Bacterial sugar transferase DOE78_11695 19d2a41aa0b0efb8fbf239d6c5ff0434 135 SUPERFAMILY SSF53271 51 77 7.81E-7 T 01-11-2018 IPR029057 Phosphoribosyltransferase-like DOE78_11695 19d2a41aa0b0efb8fbf239d6c5ff0434 135 Gene3D G3DSA:3.40.50.2020 50 102 3.1E-6 T 01-11-2018 DOE78_18055 b13d0c0690b2149ed57fedcee3ffb059 277 Pfam PF01578 Cytochrome C assembly protein 69 267 5.8E-27 T 01-11-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DOE78_21870 e052359e8d11c1efd055bae24d1a9b69 153 Pfam PF08592 Domain of unknown function (DUF1772) 27 149 2.4E-10 T 01-11-2018 DOE78_23130 29c0176eae640f4d07a81cc321d7c373 336 Gene3D G3DSA:3.90.25.10 193 328 3.1E-146 T 01-11-2018 DOE78_23130 29c0176eae640f4d07a81cc321d7c373 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 8.2E-62 T 01-11-2018 IPR016040 NAD(P)-binding domain DOE78_23130 29c0176eae640f4d07a81cc321d7c373 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 334 1.0E-140 T 01-11-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DOE78_23130 29c0176eae640f4d07a81cc321d7c373 336 Gene3D G3DSA:3.40.50.720 3 273 3.1E-146 T 01-11-2018 DOE78_23130 29c0176eae640f4d07a81cc321d7c373 336 SUPERFAMILY SSF51735 1 335 3.88E-94 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_15435 066c9aa16023e0afbb71fa35a5f5bd1e 213 SMART SM00882 9 205 4.4E-64 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_15435 066c9aa16023e0afbb71fa35a5f5bd1e 213 Gene3D G3DSA:3.40.1080.10 6 213 6.6E-88 T 01-11-2018 DOE78_15435 066c9aa16023e0afbb71fa35a5f5bd1e 213 SUPERFAMILY SSF100950 7 211 4.45E-66 T 01-11-2018 IPR037171 NagB/RpiA transferase-like DOE78_15435 066c9aa16023e0afbb71fa35a5f5bd1e 213 Pfam PF01144 Coenzyme A transferase 10 194 2.6E-36 T 01-11-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DOE78_15435 066c9aa16023e0afbb71fa35a5f5bd1e 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 8 210 2.0E-93 T 01-11-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 DOE78_24090 9bed8df3e4bd78f16560408c1cc340a6 220 SUPERFAMILY SSF48371 11 220 1.67E-51 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_24090 9bed8df3e4bd78f16560408c1cc340a6 220 Pfam PF08713 DNA alkylation repair enzyme 9 220 1.1E-65 T 01-11-2018 IPR014825 DNA alkylation repair enzyme DOE78_24090 9bed8df3e4bd78f16560408c1cc340a6 220 Gene3D G3DSA:1.25.10.90 3 220 2.1E-82 T 01-11-2018 DOE78_14985 80e1cdaf262bd8b2654a005b6561bf25 225 Pfam PF01810 LysE type translocator 28 216 1.3E-30 T 01-11-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 Pfam PF00625 Guanylate kinase 7 184 1.2E-54 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 SUPERFAMILY SSF52540 3 191 1.71E-69 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 01-11-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 SMART SM00072 4 187 2.7E-81 T 01-11-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 Gene3D G3DSA:3.30.63.10 37 96 8.4E-68 T 01-11-2018 DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 37.059 T 01-11-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 2.2E-73 T 01-11-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DOE78_07900 49930369fb73c4d80428ddd6761a8afb 204 Gene3D G3DSA:3.40.50.300 4 189 8.4E-68 T 01-11-2018 DOE78_20960 ff00c996d609abb8f63e51f629e6ee23 107 Pfam PF14068 Putative membrane protein 8 107 8.6E-42 T 01-11-2018 IPR025917 Putative membrane protein YuiB DOE78_08880 15f363bcd89e760dfd866d4d05ad5804 343 SUPERFAMILY SSF48208 18 338 1.8E-62 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_08880 15f363bcd89e760dfd866d4d05ad5804 343 Pfam PF07470 Glycosyl Hydrolase Family 88 18 335 6.9E-97 T 01-11-2018 IPR010905 Glycosyl hydrolase, family 88 DOE78_08880 15f363bcd89e760dfd866d4d05ad5804 343 Gene3D G3DSA:1.50.10.10 1 338 4.3E-89 T 01-11-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DOE78_13570 b857b1795ffe8d9f9464e582ff8e6db6 159 Pfam PF12638 Staygreen protein 3 148 6.8E-51 T 01-11-2018 IPR024438 Staygreen protein DOE78_03225 0e0fc5bb96e038ee5e0aa0318bbf8c49 245 PIRSF PIRSF031509 4 245 1.5E-61 T 01-11-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 DOE78_03225 0e0fc5bb96e038ee5e0aa0318bbf8c49 245 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 129 242 1.4E-38 T 01-11-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF DOE78_18730 24d5fcf0f3b25cd1ca7a6a62e0bcb6ec 209 Pfam PF01551 Peptidase family M23 20 115 1.5E-22 T 01-11-2018 IPR016047 Peptidase M23 DOE78_18730 24d5fcf0f3b25cd1ca7a6a62e0bcb6ec 209 SUPERFAMILY SSF51261 4 117 2.46E-29 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_18730 24d5fcf0f3b25cd1ca7a6a62e0bcb6ec 209 Gene3D G3DSA:2.70.70.10 2 131 7.7E-30 T 01-11-2018 IPR011055 Duplicated hybrid motif DOE78_13935 0561b1ce5927804ad45150b613e2739e 186 Pfam PF04982 HPP family 67 182 2.3E-31 T 01-11-2018 IPR007065 HPP DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 SUPERFAMILY SSF52172 3 157 1.85E-42 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 SUPERFAMILY SSF46894 124 222 1.84E-24 T 01-11-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 Gene3D G3DSA:1.10.10.10 123 222 3.2E-26 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 2.1E-20 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 SMART SM00448 2 112 1.9E-41 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 SMART SM00862 146 221 4.7E-17 T 01-11-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 Gene3D G3DSA:3.40.50.2300 2 122 2.2E-37 T 01-11-2018 DOE78_02655 56d5a57accc1aa9cc6891c848bbbabc9 226 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-29 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_20985 ff430cd74677105150b087c07e9df67f 230 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 7 222 7.3E-62 T 01-11-2018 IPR018708 Protein of unknown function DUF2225 DOE78_20985 ff430cd74677105150b087c07e9df67f 230 SUPERFAMILY SSF48452 117 207 1.33E-5 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_20985 ff430cd74677105150b087c07e9df67f 230 Gene3D G3DSA:1.25.40.10 99 225 3.0E-5 T 01-11-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 01-11-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.4E-50 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.4E-50 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.4E-50 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.4E-50 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.4E-50 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.367 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 SUPERFAMILY SSF55831 1 264 4.97E-132 T 01-11-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 Pfam PF00303 Thymidylate synthase 2 264 2.0E-130 T 01-11-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 Gene3D G3DSA:3.30.572.10 1 264 3.5E-134 T 01-11-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 9.6E-98 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_15550 00551aedaf6148254ea3e0c124ccbb93 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.3E-43 T 01-11-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DOE78_22715 a86a3bed508f0830c666ed030f1ffdff 228 SMART SM00382 27 221 4.4E-13 T 01-11-2018 IPR003593 AAA+ ATPase domain DOE78_22715 a86a3bed508f0830c666ed030f1ffdff 228 Gene3D G3DSA:3.40.50.300 1 224 1.9E-64 T 01-11-2018 DOE78_22715 a86a3bed508f0830c666ed030f1ffdff 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.4E-88 T 01-11-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 DOE78_22715 a86a3bed508f0830c666ed030f1ffdff 228 SUPERFAMILY SSF52540 1 219 3.77E-70 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_22715 a86a3bed508f0830c666ed030f1ffdff 228 Pfam PF00005 ABC transporter 19 165 3.4E-35 T 01-11-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DOE78_22715 a86a3bed508f0830c666ed030f1ffdff 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 01-11-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DOE78_11910 60ee22cf429c662d171f3a4b717b16ce 339 PIRSF PIRSF002825 4 331 1.1E-66 T 01-11-2018 IPR026045 Ferric binding protein DOE78_11910 60ee22cf429c662d171f3a4b717b16ce 339 Pfam PF13416 Bacterial extracellular solute-binding protein 52 306 2.3E-26 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_11910 60ee22cf429c662d171f3a4b717b16ce 339 Gene3D G3DSA:3.40.190.10 142 319 1.3E-68 T 01-11-2018 DOE78_11910 60ee22cf429c662d171f3a4b717b16ce 339 SUPERFAMILY SSF53850 36 326 2.25E-64 T 01-11-2018 DOE78_11910 60ee22cf429c662d171f3a4b717b16ce 339 Gene3D G3DSA:3.40.190.10 42 306 1.3E-68 T 01-11-2018 DOE78_18315 8adc78cc169f313f2bf3db46fa79b150 68 Pfam PF14098 Small, acid-soluble spore protein I 3 67 7.9E-31 T 01-11-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 DOE78_18315 8adc78cc169f313f2bf3db46fa79b150 68 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 22.236 T 01-11-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 DOE78_18315 8adc78cc169f313f2bf3db46fa79b150 68 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 2.3E-33 T 01-11-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 DOE78_03815 85bc47c27be5aeba363bf54d8ee63cde 358 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 354 9.5E-37 T 01-11-2018 IPR000160 GGDEF domain DOE78_03815 85bc47c27be5aeba363bf54d8ee63cde 358 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 356 7.2E-43 T 01-11-2018 IPR000160 GGDEF domain DOE78_03815 85bc47c27be5aeba363bf54d8ee63cde 358 SUPERFAMILY SSF55073 205 357 2.82E-38 T 01-11-2018 IPR029787 Nucleotide cyclase DOE78_03815 85bc47c27be5aeba363bf54d8ee63cde 358 Gene3D G3DSA:3.30.70.270 185 358 7.0E-46 T 01-11-2018 DOE78_03815 85bc47c27be5aeba363bf54d8ee63cde 358 SMART SM00267 188 358 6.7E-44 T 01-11-2018 IPR000160 GGDEF domain DOE78_02615 ccfd9c3db8b9de1627e63ea8095d08d0 129 Pfam PF14552 Tautomerase enzyme 38 114 2.8E-26 T 01-11-2018 IPR037479 Tautomerase, MSAD family DOE78_02615 ccfd9c3db8b9de1627e63ea8095d08d0 129 SUPERFAMILY SSF55331 4 123 7.43E-34 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_02615 ccfd9c3db8b9de1627e63ea8095d08d0 129 Gene3D G3DSA:3.30.429.10 2 129 4.9E-41 T 01-11-2018 IPR014347 Tautomerase/MIF superfamily DOE78_18465 07b46b4f20f9a67fb352c1c42d431773 371 Pfam PF01594 AI-2E family transporter 13 353 1.3E-63 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like DOE78_18465 07b46b4f20f9a67fb352c1c42d431773 371 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 12 359 9.0E-110 T 01-11-2018 IPR014227 Putative transport protein YtvI-like DOE78_08995 984c1f441f5a74bebbd0ed5fa1e31915 390 SUPERFAMILY SSF53822 42 388 1.1E-62 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_08995 984c1f441f5a74bebbd0ed5fa1e31915 390 Pfam PF13458 Periplasmic binding protein 44 361 5.2E-46 T 01-11-2018 IPR028081 Leucine-binding protein domain DOE78_08995 984c1f441f5a74bebbd0ed5fa1e31915 390 Gene3D G3DSA:3.40.50.2300 160 376 9.0E-76 T 01-11-2018 DOE78_08995 984c1f441f5a74bebbd0ed5fa1e31915 390 Gene3D G3DSA:3.40.50.2300 44 372 9.0E-76 T 01-11-2018 DOE78_23990 384a16b3c4c381af5b22a3c3dec290c5 123 Pfam PF04241 Protein of unknown function (DUF423) 18 105 6.8E-33 T 01-11-2018 IPR006696 Protein of unknown function DUF423 DOE78_08870 526a1654777fabbf5b9d7cbca8d048c6 278 Pfam PF01261 Xylose isomerase-like TIM barrel 20 221 7.7E-24 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_08870 526a1654777fabbf5b9d7cbca8d048c6 278 SUPERFAMILY SSF51658 3 248 6.91E-33 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_08870 526a1654777fabbf5b9d7cbca8d048c6 278 Gene3D G3DSA:3.20.20.150 2 274 2.0E-44 T 01-11-2018 DOE78_23115 0686c0537ed89920ac4e25a7e12a0ee1 310 Gene3D G3DSA:3.90.25.10 169 304 3.2E-113 T 01-11-2018 DOE78_23115 0686c0537ed89920ac4e25a7e12a0ee1 310 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 306 50.931 T 01-11-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 DOE78_23115 0686c0537ed89920ac4e25a7e12a0ee1 310 SUPERFAMILY SSF51735 1 308 6.28E-78 T 01-11-2018 IPR036291 NAD(P)-binding domain superfamily DOE78_23115 0686c0537ed89920ac4e25a7e12a0ee1 310 Gene3D G3DSA:3.40.50.720 7 295 3.2E-113 T 01-11-2018 DOE78_23115 0686c0537ed89920ac4e25a7e12a0ee1 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 238 3.8E-78 T 01-11-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DOE78_23620 e6bb1447cb71549367536b6099e44e2c 505 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 9 490 17.543 T 01-11-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DOE78_23620 e6bb1447cb71549367536b6099e44e2c 505 Pfam PF00361 Proton-conducting membrane transporter 131 433 1.1E-68 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_23620 e6bb1447cb71549367536b6099e44e2c 505 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 489 2.1E-117 T 01-11-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DOE78_03025 5e821055bc79f442e72d55f76cefb41d 83 Pfam PF14166 YueH-like protein 7 76 2.4E-14 T 01-11-2018 IPR020260 Uncharacterised protein family YueH DOE78_15730 1e0e3ed30ce52160d8a6bf05e428ef52 306 SUPERFAMILY SSF103481 214 291 6.28E-13 T 01-11-2018 DOE78_15730 1e0e3ed30ce52160d8a6bf05e428ef52 306 SUPERFAMILY SSF103481 40 143 3.66E-12 T 01-11-2018 DOE78_15730 1e0e3ed30ce52160d8a6bf05e428ef52 306 Pfam PF00892 EamA-like transporter family 149 287 1.8E-18 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_15730 1e0e3ed30ce52160d8a6bf05e428ef52 306 Pfam PF00892 EamA-like transporter family 6 140 4.8E-19 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_18665 4e5a5442dc5b28aef35253a8be513f54 565 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 562 21.902 T 01-11-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 DOE78_18665 4e5a5442dc5b28aef35253a8be513f54 565 Pfam PF06160 Septation ring formation regulator, EzrA 3 557 2.2E-175 T 01-11-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 DOE78_12700 18d2e43b6285dec69855b498698730b1 216 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 151 204 4.0E-15 T 01-11-2018 DOE78_12755 ce9c75f28c08fb5907e45c08aa0c68ed 427 Pfam PF03611 PTS system sugar-specific permease component 10 407 3.8E-126 T 01-11-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DOE78_16495 f6ecf715c02bcc3281983d9d9d2e888f 83 Pfam PF13025 Protein of unknown function (DUF3886) 15 81 3.3E-22 T 01-11-2018 IPR024980 Protein of unknown function DUF3886 DOE78_11230 be294267f8963a2747bd7d6b44adbccc 150 SUPERFAMILY SSF55729 3 143 2.49E-36 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_11230 be294267f8963a2747bd7d6b44adbccc 150 Pfam PF13673 Acetyltransferase (GNAT) domain 23 143 2.2E-18 T 01-11-2018 IPR000182 GNAT domain DOE78_11230 be294267f8963a2747bd7d6b44adbccc 150 Gene3D G3DSA:3.40.630.30 1 145 8.8E-40 T 01-11-2018 DOE78_02970 9911c1fe02b7835c79760cd2c6e70a6c 444 Pfam PF05525 Branched-chain amino acid transport protein 3 427 3.0E-147 T 01-11-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DOE78_02970 9911c1fe02b7835c79760cd2c6e70a6c 444 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 10 415 3.5E-132 T 01-11-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DOE78_13430 43dbebe31fd1f086e02fd28bd372503d 123 SUPERFAMILY SSF49764 21 121 4.53E-6 T 01-11-2018 IPR008978 HSP20-like chaperone DOE78_04620 16d152777401aa75739092ea9a932843 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 336 1.4E-36 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_19230 6d3aaa6ca6d97873a68922b163506fb5 371 SUPERFAMILY SSF144052 1 360 1.96E-112 T 01-11-2018 DOE78_19230 6d3aaa6ca6d97873a68922b163506fb5 371 Gene3D G3DSA:3.40.1830.10 2 163 1.3E-13 T 01-11-2018 IPR035097 Peptidase M29, N-terminal DOE78_19230 6d3aaa6ca6d97873a68922b163506fb5 371 Pfam PF02073 Thermophilic metalloprotease (M29) 3 357 7.0E-61 T 01-11-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DOE78_24230 7fffe4049ea73d6620f9d7397a86ba1c 484 Pfam PF02554 Carbon starvation protein CstA 4 162 1.6E-32 T 01-11-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DOE78_24230 7fffe4049ea73d6620f9d7397a86ba1c 484 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 318 428 7.3E-22 T 01-11-2018 IPR025299 CstA, C-terminal domain DOE78_12520 62735a8bea8a670b168614cbe2abc7ef 235 Pfam PF08713 DNA alkylation repair enzyme 6 179 9.6E-15 T 01-11-2018 IPR014825 DNA alkylation repair enzyme DOE78_12520 62735a8bea8a670b168614cbe2abc7ef 235 SUPERFAMILY SSF48371 1 234 9.21E-60 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_00660 774bf1c6809e553d9b966e5bb65768b8 200 Gene3D G3DSA:3.40.50.150 6 200 5.2E-49 T 01-11-2018 DOE78_00660 774bf1c6809e553d9b966e5bb65768b8 200 SUPERFAMILY SSF53335 7 198 3.62E-39 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_00660 774bf1c6809e553d9b966e5bb65768b8 200 Pfam PF05175 Methyltransferase small domain 28 196 6.2E-51 T 01-11-2018 IPR007848 Methyltransferase small domain GO:0008168 DOE78_23770 5e9d36f25ed288ae5bdda43ef0bc4cf1 346 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 14 213 2.8E-66 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 DOE78_23770 5e9d36f25ed288ae5bdda43ef0bc4cf1 346 Gene3D G3DSA:3.90.870.10 3 219 9.3E-84 T 01-11-2018 DOE78_23770 5e9d36f25ed288ae5bdda43ef0bc4cf1 346 PIRSF PIRSF004930 1 346 5.4E-134 T 01-11-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DOE78_23770 5e9d36f25ed288ae5bdda43ef0bc4cf1 346 Gene3D G3DSA:3.40.50.11030 222 346 5.2E-41 T 01-11-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily DOE78_23770 5e9d36f25ed288ae5bdda43ef0bc4cf1 346 SUPERFAMILY SSF55821 17 217 2.93E-65 T 01-11-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DOE78_23770 5e9d36f25ed288ae5bdda43ef0bc4cf1 346 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 341 2.9E-27 T 01-11-2018 IPR005145 Putative GTP-binding controlling metal-binding domain DOE78_23770 5e9d36f25ed288ae5bdda43ef0bc4cf1 346 Pfam PF01300 Telomere recombination 27 203 3.3E-57 T 01-11-2018 IPR006070 YrdC-like domain GO:0003725 DOE78_02960 600fabe6d421711974f5728aba62657b 95 Pfam PF10850 Protein of unknown function (DUF2653) 1 86 2.5E-37 T 01-11-2018 IPR020516 Uncharacterised protein family YxcD DOE78_02960 600fabe6d421711974f5728aba62657b 95 ProDom PD068665 YXCD 1 92 2.0E-26 T 01-11-2018 IPR020516 Uncharacterised protein family YxcD DOE78_08300 58d775924cb18d18103f922ae66ab791 165 Pfam PF03975 CheD chemotactic sensory transduction 51 156 1.5E-35 T 01-11-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DOE78_08300 58d775924cb18d18103f922ae66ab791 165 Gene3D G3DSA:3.30.1330.200 5 164 2.3E-47 T 01-11-2018 IPR038592 CheD-like superfamily DOE78_08300 58d775924cb18d18103f922ae66ab791 165 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 4 161 26.896 T 01-11-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DOE78_08300 58d775924cb18d18103f922ae66ab791 165 SUPERFAMILY SSF64438 7 162 1.83E-47 T 01-11-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DOE78_19415 d53012dfbe3f77099af39b1e1a0b74f2 239 Pfam PF17115 N-terminal domain of toast_rack, DUF2154 39 130 5.5E-26 T 01-11-2018 IPR031346 Uncharacterised protein DUF2154, N-terminal DOE78_06090 767c7f25b201d13f8bc023dc98005e2f 330 Pfam PF04392 ABC transporter substrate binding protein 40 328 1.4E-79 T 01-11-2018 IPR007487 ABC transporter, substrate-binding protein DOE78_06090 767c7f25b201d13f8bc023dc98005e2f 330 SUPERFAMILY SSF53822 37 239 7.07E-16 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_06090 767c7f25b201d13f8bc023dc98005e2f 330 Gene3D G3DSA:3.40.50.2300 51 301 5.4E-85 T 01-11-2018 DOE78_06090 767c7f25b201d13f8bc023dc98005e2f 330 Gene3D G3DSA:3.40.50.2300 150 321 5.4E-85 T 01-11-2018 DOE78_06540 23d97b1e4d7de0157393590f9a7e60f0 310 SUPERFAMILY SSF53901 3 308 1.05E-72 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_06540 23d97b1e4d7de0157393590f9a7e60f0 310 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 8.6E-32 T 01-11-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_06540 23d97b1e4d7de0157393590f9a7e60f0 310 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 308 3.9E-137 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_06540 23d97b1e4d7de0157393590f9a7e60f0 310 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 219 308 2.4E-36 T 01-11-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_06540 23d97b1e4d7de0157393590f9a7e60f0 310 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 308 73.231 T 01-11-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DOE78_06540 23d97b1e4d7de0157393590f9a7e60f0 310 Gene3D G3DSA:3.40.47.10 1 310 7.0E-135 T 01-11-2018 IPR016039 Thiolase-like GO:0003824 DOE78_14200 0881a0d0ed1b4adbc841784dfb26c835 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 153 4.6E-36 T 01-11-2018 IPR007387 TRAP transporter, small membrane protein DctQ DOE78_16400 8f4b772ceada060f1036fd4ea0ddcb11 189 Pfam PF14097 Stage V sporulation protein AE1 6 185 3.6E-82 T 01-11-2018 IPR025914 Stage V sporulation protein AE DOE78_17630 4cc81e64bd3663f3671c2d675bf5a18d 72 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 6 72 2.0E-5 T 01-11-2018 IPR025418 YrhC-like protein DOE78_17630 4cc81e64bd3663f3671c2d675bf5a18d 72 Pfam PF14143 YrhC-like protein 2 68 3.4E-22 T 01-11-2018 IPR025418 YrhC-like protein DOE78_14850 c849354f25f785e66d616548b05861d0 142 Pfam PF04138 GtrA-like protein 18 132 6.7E-30 T 01-11-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DOE78_09155 92dd7eecaf48c89d09b3ad262d61ab83 312 SUPERFAMILY SSF56529 91 307 1.16E-76 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_09155 92dd7eecaf48c89d09b3ad262d61ab83 312 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 306 1.1E-65 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DOE78_09155 92dd7eecaf48c89d09b3ad262d61ab83 312 Gene3D G3DSA:3.90.850.10 98 312 1.5E-80 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_03875 166c96934dba553a87e8437f1e6a1716 539 SUPERFAMILY SSF75011 118 538 1.31E-14 T 01-11-2018 DOE78_03875 166c96934dba553a87e8437f1e6a1716 539 Gene3D G3DSA:2.130.10.10 61 351 4.2E-8 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DOE78_06595 405bd2cc0763fceeb4e69b16a8283e25 119 Pfam PF13038 Domain of unknown function (DUF3899) 36 115 5.5E-9 T 01-11-2018 IPR025007 Domain of unknown function DUF3899 DOE78_13065 4978407dcb45f2141f7b092c8e92499a 488 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 74 3.5E-15 T 01-11-2018 DOE78_13065 4978407dcb45f2141f7b092c8e92499a 488 Gene3D G3DSA:3.50.50.60 3 90 1.1E-19 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13065 4978407dcb45f2141f7b092c8e92499a 488 SUPERFAMILY SSF51905 1 486 6.15E-32 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_07430 68cb808f196b217666bc5030f48bc320 66 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 1 56 7.7E-31 T 01-11-2018 IPR019241 Protein of unknown function DUF2197 DOE78_17680 103135a99cd70c25b6f6da9bf4f8d5ad 95 Hamap MF_01448 UPF0473 protein . 4 91 22.676 T 01-11-2018 IPR009711 Uncharacterised protein family UPF0473 DOE78_17680 103135a99cd70c25b6f6da9bf4f8d5ad 95 Pfam PF06949 Protein of unknown function (DUF1292) 13 90 2.2E-17 T 01-11-2018 IPR009711 Uncharacterised protein family UPF0473 DOE78_07800 6dc2ab0829c0a9e6fe1a23bb2e955378 257 Pfam PF01479 S4 domain 182 227 1.3E-6 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_07800 6dc2ab0829c0a9e6fe1a23bb2e955378 257 SUPERFAMILY SSF55174 35 251 1.7E-35 T 01-11-2018 DOE78_07800 6dc2ab0829c0a9e6fe1a23bb2e955378 257 Gene3D G3DSA:3.10.290.10 179 236 7.7E-9 T 01-11-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DOE78_07800 6dc2ab0829c0a9e6fe1a23bb2e955378 257 Gene3D G3DSA:3.30.70.330 80 166 9.9E-29 T 01-11-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DOE78_07800 6dc2ab0829c0a9e6fe1a23bb2e955378 257 SMART SM00363 181 238 1.9E-7 T 01-11-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DOE78_07800 6dc2ab0829c0a9e6fe1a23bb2e955378 257 Gene3D G3DSA:3.30.1370.160 2 79 8.8E-31 T 01-11-2018 DOE78_15685 e67c3998bf8925960b866b1c4a2efd68 193 Pfam PF02417 Chromate transporter 6 170 6.8E-37 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DOE78_18810 44f4d76367121cdf7a8b567f417df198 257 Pfam PF05709 Phage tail protein 9 257 1.9E-46 T 01-11-2018 IPR008841 Siphovirus-type tail component DOE78_06965 ea0fd214e0993825b509e38adc631048 65 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 60 3.0E-20 T 01-11-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DOE78_06965 ea0fd214e0993825b509e38adc631048 65 Gene3D G3DSA:1.10.8.910 6 65 2.6E-27 T 01-11-2018 IPR038300 SASP, alpha/beta-type superfamily DOE78_06965 ea0fd214e0993825b509e38adc631048 65 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 21 30 - T 01-11-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DOE78_13390 ae7b90c337859c3c1f8c639e088996bb 284 TIGRFAM TIGR04383 acidic_w_LPXTA: processed acidic surface protein 43 274 2.0E-50 T 01-11-2018 IPR030832 Processed acidic surface protein DOE78_03395 4be709ee618a25660477d89ce82f9813 264 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 01-11-2018 IPR000540 Flagellar motor protein MotA, conserved site DOE78_03395 4be709ee618a25660477d89ce82f9813 264 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 219 6.5E-26 T 01-11-2018 IPR002898 MotA/TolQ/ExbB proton channel DOE78_05785 bc2fb7332a2e516ec030bf0d46fecf3d 86 Pfam PF02583 Metal-sensitive transcriptional repressor 5 83 1.1E-25 T 01-11-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DOE78_05785 bc2fb7332a2e516ec030bf0d46fecf3d 86 Gene3D G3DSA:1.20.58.1000 1 85 3.8E-25 T 01-11-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily DOE78_17355 b6970b94d499045f5368c0f761742a69 156 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 8 152 29.581 T 01-11-2018 IPR003791 Protein of unknown function UPF0178 DOE78_17355 b6970b94d499045f5368c0f761742a69 156 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 22 150 1.4E-40 T 01-11-2018 IPR003791 Protein of unknown function UPF0178 DOE78_09510 3b85a2802f5139e92a13e6c0186e3b27 187 Gene3D G3DSA:3.40.50.300 1 176 6.6E-16 T 01-11-2018 DOE78_09510 3b85a2802f5139e92a13e6c0186e3b27 187 SUPERFAMILY SSF52540 5 168 5.55E-16 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_09000 5343e69d931f4621dd7d7c71465a4e88 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 274 8.3E-42 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 102 150 - T 01-11-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 84 156 8.1E-11 T 01-11-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 PRINTS PR01166 Cytochrome c oxidase subunit II signature 77 98 1.8E-5 T 01-11-2018 DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 121 1.8E-5 T 01-11-2018 DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 PRINTS PR01166 Cytochrome c oxidase subunit II signature 139 156 1.8E-5 T 01-11-2018 DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 PRINTS PR01166 Cytochrome c oxidase subunit II signature 2 14 1.8E-5 T 01-11-2018 DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 SUPERFAMILY SSF49503 30 157 5.57E-28 T 01-11-2018 IPR008972 Cupredoxin DOE78_15795 faaa94d08751f43eb8e872c37172e162 158 Gene3D G3DSA:2.60.40.420 25 156 1.2E-31 T 01-11-2018 IPR008972 Cupredoxin DOE78_21055 e2ff7e36bc1ebdb0be9b0e53afa7a5c7 88 Pfam PF11256 Protein of unknown function (DUF3055) 7 86 3.6E-36 T 01-11-2018 IPR021415 Protein of unknown function DUF3055 DOE78_09210 e6e0238f1cd69bd0d741170774948054 166 Gene3D G3DSA:3.10.450.50 1 166 1.7E-53 T 01-11-2018 DOE78_09210 e6e0238f1cd69bd0d741170774948054 166 Pfam PF00866 Ring hydroxylating beta subunit 15 158 3.8E-39 T 01-11-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 DOE78_09210 e6e0238f1cd69bd0d741170774948054 166 SUPERFAMILY SSF54427 2 166 2.85E-45 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_05705 09cb63010ac59353d6ba66fb6bfdd1ec 295 Pfam PF13616 PPIC-type PPIASE domain 156 248 1.3E-27 T 01-11-2018 DOE78_05705 09cb63010ac59353d6ba66fb6bfdd1ec 295 SUPERFAMILY SSF109998 33 187 9.22E-31 T 01-11-2018 IPR027304 Trigger factor/SurA domain superfamily DOE78_05705 09cb63010ac59353d6ba66fb6bfdd1ec 295 Gene3D G3DSA:3.10.50.40 158 249 1.2E-53 T 01-11-2018 DOE78_05705 09cb63010ac59353d6ba66fb6bfdd1ec 295 Gene3D G3DSA:1.10.4030.30 33 273 1.2E-53 T 01-11-2018 DOE78_05705 09cb63010ac59353d6ba66fb6bfdd1ec 295 Pfam PF13624 SurA N-terminal domain 8 131 3.0E-10 T 01-11-2018 DOE78_05705 09cb63010ac59353d6ba66fb6bfdd1ec 295 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 186 207 - T 01-11-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DOE78_05705 09cb63010ac59353d6ba66fb6bfdd1ec 295 SUPERFAMILY SSF54534 150 247 1.7E-32 T 01-11-2018 DOE78_01290 481466a8a09811b4e2bfb49b5577d8c0 230 PIRSF PIRSF017388 1 230 2.5E-60 T 01-11-2018 IPR012354 Esterase/lipase GO:0052689 DOE78_01290 481466a8a09811b4e2bfb49b5577d8c0 230 Gene3D G3DSA:3.40.50.1820 3 228 1.2E-48 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_01290 481466a8a09811b4e2bfb49b5577d8c0 230 Pfam PF12146 Serine aminopeptidase, S33 30 210 3.1E-13 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 DOE78_01290 481466a8a09811b4e2bfb49b5577d8c0 230 SUPERFAMILY SSF53474 5 228 2.53E-36 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_07795 a1194a0a72af4e5e13d2939cae445068 87 Pfam PF02325 YGGT family 11 77 9.9E-24 T 01-11-2018 IPR003425 CCB3/YggT GO:0016020 DOE78_05570 b34ff894b062de2b5c8e618c8d14946a 261 Pfam PF13529 Peptidase_C39 like family 75 234 9.3E-40 T 01-11-2018 IPR039564 Peptidase C39-like DOE78_05570 b34ff894b062de2b5c8e618c8d14946a 261 PIRSF PIRSF032442 7 261 3.5E-74 T 01-11-2018 IPR016997 Uncharacterised conserved protein UCP032442 DOE78_05570 b34ff894b062de2b5c8e618c8d14946a 261 Gene3D G3DSA:3.90.70.10 70 261 4.0E-67 T 01-11-2018 DOE78_05545 d22a0421055e2456025f006d053665de 85 Pfam PF14148 YhdB-like protein 1 69 2.8E-39 T 01-11-2018 IPR025431 YhdB-like protein DOE78_08575 7a465b9270ae92166b5f86196bff4f2d 308 SUPERFAMILY SSF51556 1 307 2.04E-75 T 01-11-2018 IPR032466 Metal-dependent hydrolase DOE78_08575 7a465b9270ae92166b5f86196bff4f2d 308 Gene3D G3DSA:3.20.20.140 1 307 2.3E-105 T 01-11-2018 DOE78_08575 7a465b9270ae92166b5f86196bff4f2d 308 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 304 1.3E-93 T 01-11-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 DOE78_15835 e9b95f775c9b2ba7c17b1eff55088194 129 Pfam PF11122 Inner spore coat protein D 13 99 9.5E-24 T 01-11-2018 IPR020108 Spore coat protein CotD DOE78_15835 e9b95f775c9b2ba7c17b1eff55088194 129 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 5 66 3.0E-14 T 01-11-2018 IPR020108 Spore coat protein CotD DOE78_03835 c9da1491b6a67b910a9c58a8697a6165 448 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 448 7.1E-200 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DOE78_03835 c9da1491b6a67b910a9c58a8697a6165 448 PIRSF PIRSF002746 1 448 3.0E-176 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DOE78_03835 c9da1491b6a67b910a9c58a8697a6165 448 Pfam PF02447 GntP family permease 1 446 4.8E-178 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DOE78_03595 be53bad7c433ab0c9bf392bad4cfba95 295 Gene3D G3DSA:1.10.3720.10 18 286 3.5E-60 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03595 be53bad7c433ab0c9bf392bad4cfba95 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 288 3.4E-23 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_03595 be53bad7c433ab0c9bf392bad4cfba95 295 SUPERFAMILY SSF161098 24 294 2.34E-71 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_02510 df13350cf15a1dbc8670d23ada12e55e 348 Pfam PF13407 Periplasmic binding protein domain 53 308 6.2E-53 T 01-11-2018 IPR025997 Periplasmic binding protein DOE78_02510 df13350cf15a1dbc8670d23ada12e55e 348 SUPERFAMILY SSF53822 50 348 1.02E-66 T 01-11-2018 IPR028082 Periplasmic binding protein-like I DOE78_02510 df13350cf15a1dbc8670d23ada12e55e 348 Gene3D G3DSA:3.40.50.2300 153 348 2.0E-110 T 01-11-2018 DOE78_02510 df13350cf15a1dbc8670d23ada12e55e 348 Gene3D G3DSA:3.40.50.2300 52 332 2.0E-110 T 01-11-2018 DOE78_09415 38ecf226878bb58c7b9791fd2baa7c7b 368 Gene3D G3DSA:1.20.1440.110 9 120 4.2E-31 T 01-11-2018 DOE78_09415 38ecf226878bb58c7b9791fd2baa7c7b 368 SUPERFAMILY SSF53474 12 366 7.56E-63 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_09415 38ecf226878bb58c7b9791fd2baa7c7b 368 Gene3D G3DSA:3.40.50.1820 122 367 5.3E-53 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_09415 38ecf226878bb58c7b9791fd2baa7c7b 368 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 47 253 1.9E-13 T 01-11-2018 IPR010520 UPF0255 family DOE78_00155 70e269d35684915f68fc51739eb4c73d 87 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 5 86 8.5E-27 T 01-11-2018 IPR010001 SigmaK-factor processing regulatory BofA DOE78_00155 70e269d35684915f68fc51739eb4c73d 87 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 12 85 1.8E-20 T 01-11-2018 IPR010001 SigmaK-factor processing regulatory BofA DOE78_10440 73bae75b0ab934fea4186b9f64213400 304 SUPERFAMILY SSF51730 38 301 6.67E-75 T 01-11-2018 IPR029041 FAD-linked oxidoreductase-like DOE78_10440 73bae75b0ab934fea4186b9f64213400 304 PIRSF PIRSF000196 2 304 1.5E-130 T 01-11-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 DOE78_10440 73bae75b0ab934fea4186b9f64213400 304 Gene3D G3DSA:3.20.20.530 19 302 2.6E-94 T 01-11-2018 DOE78_10440 73bae75b0ab934fea4186b9f64213400 304 Pfam PF01619 Proline dehydrogenase 46 290 1.8E-33 T 01-11-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DOE78_07055 fe20c6b385f876fb8ae493be05e0709b 248 Pfam PF02535 ZIP Zinc transporter 104 239 8.1E-14 T 01-11-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 DOE78_24570 0918278df3ec3140f19cb9fa7b6baa05 445 Pfam PF07435 YycH protein 4 445 4.2E-87 T 01-11-2018 IPR009996 Regulatory protein YycH DOE78_24570 0918278df3ec3140f19cb9fa7b6baa05 445 Gene3D G3DSA:3.30.310.160 223 363 2.1E-55 T 01-11-2018 DOE78_24570 0918278df3ec3140f19cb9fa7b6baa05 445 Gene3D G3DSA:3.10.450.310 204 404 2.1E-55 T 01-11-2018 DOE78_21435 cad5d9f2ce7402ca7859ae8e031a9621 316 Gene3D G3DSA:1.10.3720.10 64 307 2.9E-63 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21435 cad5d9f2ce7402ca7859ae8e031a9621 316 SUPERFAMILY SSF161098 68 296 4.71E-56 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_21435 cad5d9f2ce7402ca7859ae8e031a9621 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 303 8.8E-20 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 SUPERFAMILY SSF51905 1 292 4.98E-25 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 Gene3D G3DSA:3.50.50.60 5 290 9.7E-80 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 271 1.3E-7 T 01-11-2018 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-7 T 01-11-2018 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 5.0E-12 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 296 5.0E-12 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 5.0E-12 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 5.0E-12 T 01-11-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 145 1.2E-10 T 01-11-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DOE78_10835 0657eb631b2af58c88b4ebb911457ccd 301 Gene3D G3DSA:3.50.50.60 117 228 9.7E-80 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_05535 27748e41301c303f53e30fbd23ec5e15 203 SUPERFAMILY SSF46689 4 86 3.19E-18 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_05535 27748e41301c303f53e30fbd23ec5e15 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.7E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_05535 27748e41301c303f53e30fbd23ec5e15 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.7E-8 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_05535 27748e41301c303f53e30fbd23ec5e15 203 SUPERFAMILY SSF48498 83 193 1.07E-5 T 01-11-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DOE78_05535 27748e41301c303f53e30fbd23ec5e15 203 Gene3D G3DSA:1.10.357.10 2 191 1.8E-31 T 01-11-2018 DOE78_05535 27748e41301c303f53e30fbd23ec5e15 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.9E-13 T 01-11-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DOE78_11935 557c03aacf26ef0ea993687deac4d6e5 411 Pfam PF13416 Bacterial extracellular solute-binding protein 51 332 2.3E-31 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_11935 557c03aacf26ef0ea993687deac4d6e5 411 SUPERFAMILY SSF53850 17 407 4.3E-61 T 01-11-2018 DOE78_11935 557c03aacf26ef0ea993687deac4d6e5 411 Gene3D G3DSA:3.40.190.10 49 352 7.3E-92 T 01-11-2018 DOE78_11935 557c03aacf26ef0ea993687deac4d6e5 411 Gene3D G3DSA:3.40.190.10 144 370 7.3E-92 T 01-11-2018 DOE78_11935 557c03aacf26ef0ea993687deac4d6e5 411 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 138 155 - T 01-11-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 PRINTS PR00175 Sodium/alanine symporter signature 405 425 4.1E-61 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 PRINTS PR00175 Sodium/alanine symporter signature 301 319 4.1E-61 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 PRINTS PR00175 Sodium/alanine symporter signature 345 367 4.1E-61 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 PRINTS PR00175 Sodium/alanine symporter signature 182 200 4.1E-61 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 PRINTS PR00175 Sodium/alanine symporter signature 210 229 4.1E-61 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.1E-61 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 436 1.2E-151 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14755 d360c28f90c58e53512756a9eb62b6f7 473 Pfam PF01235 Sodium:alanine symporter family 57 448 2.3E-153 T 01-11-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DOE78_14900 5c56994e8a1b4f1e019bba8b4c0ec218 252 Pfam PF09929 Putative PD-(D/E)XK phosphodiesterase (DUF2161) 103 223 3.9E-36 T 01-11-2018 IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) DOE78_05915 4a2252f0bb0121c5fb44afcdbb7b90df 175 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 171 2.0E-51 T 01-11-2018 DOE78_05915 4a2252f0bb0121c5fb44afcdbb7b90df 175 Pfam PF17099 Tryptophan transporter TrpP 2 160 2.3E-54 T 01-11-2018 IPR031360 Tryptophan transporter TrpP DOE78_16125 491983fc84d21f87b3414837b96aa489 66 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 66 2.0E-15 T 01-11-2018 IPR020076 Protein of unknown function DUF2768 DOE78_16125 491983fc84d21f87b3414837b96aa489 66 Pfam PF10966 Protein of unknown function (DUF2768) 7 64 8.3E-26 T 01-11-2018 IPR020076 Protein of unknown function DUF2768 DOE78_21085 635b2265757006dc93b8deae317d5662 35 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 24 1.5E-9 T 01-11-2018 IPR031596 Putative methionine and alanine importer, small subunit DOE78_10820 a327d6a4a70f5f15f61ef970cf45149a 198 Pfam PF06042 Nucleotidyltransferase 24 185 9.1E-57 T 01-11-2018 IPR009267 Putative nucleotidyltransferase DOE78_02485 5e08b73ec2ebc234398777f5464ef180 84 Pfam PF02643 Uncharacterized ACR, COG1430 1 83 7.8E-16 T 01-11-2018 IPR003795 Protein of unknown function DUF192 DOE78_02485 5e08b73ec2ebc234398777f5464ef180 84 Gene3D G3DSA:2.60.120.1140 15 83 2.0E-9 T 01-11-2018 IPR038695 Saro_0823-like superfamily DOE78_07195 44a076989364aa63f50a98ad0ba7e211 152 Gene3D G3DSA:1.20.120.450 3 152 3.2E-25 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_07195 44a076989364aa63f50a98ad0ba7e211 152 Pfam PF12867 DinB superfamily 7 147 3.4E-11 T 01-11-2018 IPR024775 DinB-like domain DOE78_07195 44a076989364aa63f50a98ad0ba7e211 152 SUPERFAMILY SSF109854 11 151 7.17E-19 T 01-11-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DOE78_16350 addd421ff80d5c99abb59a71ede69995 377 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 253 1.3E-67 T 01-11-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DOE78_16350 addd421ff80d5c99abb59a71ede69995 377 SUPERFAMILY SSF56601 3 263 1.03E-61 T 01-11-2018 IPR012338 Beta-lactamase/transpeptidase-like DOE78_16350 addd421ff80d5c99abb59a71ede69995 377 Gene3D G3DSA:2.30.140.30 275 357 2.7E-16 T 01-11-2018 DOE78_16350 addd421ff80d5c99abb59a71ede69995 377 Gene3D G3DSA:3.40.710.10 21 274 6.3E-84 T 01-11-2018 DOE78_16350 addd421ff80d5c99abb59a71ede69995 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 3.7E-15 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_16350 addd421ff80d5c99abb59a71ede69995 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 3.7E-15 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_16350 addd421ff80d5c99abb59a71ede69995 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 3.7E-15 T 01-11-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DOE78_04855 37184f323471df7e8f3c5add5426ad63 214 Pfam PF09347 Domain of unknown function (DUF1989) 20 185 2.5E-47 T 01-11-2018 IPR018959 Protein of unknown function DUF1989 DOE78_04030 7520f806f15302f5022917b35cf208e1 142 Gene3D G3DSA:3.10.180.10 9 142 1.1E-42 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_04030 7520f806f15302f5022917b35cf208e1 142 SUPERFAMILY SSF54593 1 137 4.27E-34 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_04030 7520f806f15302f5022917b35cf208e1 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 135 1.0E-7 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_12850 2e23f32f73e24d9e91baba677ca66f86 159 Pfam PF11391 Protein of unknown function (DUF2798) 88 146 8.1E-9 T 01-11-2018 IPR021529 Protein of unknown function DUF2798 DOE78_16545 5911b5a1f6adbfd129b5ce6f6d261d91 307 SUPERFAMILY SSF53474 7 298 3.16E-42 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_16545 5911b5a1f6adbfd129b5ce6f6d261d91 307 Pfam PF12146 Serine aminopeptidase, S33 79 193 6.5E-12 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 DOE78_16545 5911b5a1f6adbfd129b5ce6f6d261d91 307 Gene3D G3DSA:3.40.50.1820 54 302 7.5E-43 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_00275 d8ff560d6edde770d9d86a09de8fac14 87 Gene3D G3DSA:2.30.30.100 1 78 1.3E-25 T 01-11-2018 DOE78_00275 d8ff560d6edde770d9d86a09de8fac14 87 Pfam PF06257 Biofilm formation stimulator VEG 4 74 5.7E-30 T 01-11-2018 IPR009366 Protein Veg GO:0006355 DOE78_00275 d8ff560d6edde770d9d86a09de8fac14 87 PIRSF PIRSF037257 1 85 5.0E-36 T 01-11-2018 IPR009366 Protein Veg GO:0006355 DOE78_03045 f085aa57995ba0dfe2d4e93231424c0d 398 Gene3D G3DSA:1.20.1250.20 17 389 6.4E-58 T 01-11-2018 DOE78_03045 f085aa57995ba0dfe2d4e93231424c0d 398 SUPERFAMILY SSF103473 18 395 6.15E-65 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_03045 f085aa57995ba0dfe2d4e93231424c0d 398 Pfam PF07690 Major Facilitator Superfamily 27 245 2.5E-30 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_03045 f085aa57995ba0dfe2d4e93231424c0d 398 Pfam PF07690 Major Facilitator Superfamily 252 396 1.3E-17 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_06960 e508afd40c8e0c90ea8475f488e0ae94 325 Pfam PF12791 Anti-sigma factor N-terminus 7 45 1.4E-9 T 01-11-2018 IPR024449 Anti-sigma factor RsgI, N-terminal DOE78_08060 a85d4fcf362fc0cd34184823052a17f2 128 Pfam PF11068 YlqD protein 1 128 2.3E-32 T 01-11-2018 IPR021297 YlqD protein DOE78_18145 1530a9272f70aa6cc2bd879da6ffbc2b 321 SUPERFAMILY SSF161098 91 307 1.83E-19 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_18145 1530a9272f70aa6cc2bd879da6ffbc2b 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 320 4.3E-44 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_18145 1530a9272f70aa6cc2bd879da6ffbc2b 321 Gene3D G3DSA:1.10.3720.10 87 314 5.0E-22 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_08600 32e9515e8cc00019841a912f1af96d93 179 Pfam PF10628 Outer spore coat protein E (CotE) 4 173 2.7E-68 T 01-11-2018 IPR018901 Spore coat protein CotE DOE78_18880 7db3920526a5e8d857202059c463037e 528 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 35 507 2.1E-11 T 01-11-2018 IPR021145 Portal protein DOE78_24015 a9cc8987e94a0ccafc06f9b658742f38 339 Gene3D G3DSA:3.40.50.720 2 249 6.5E-71 T 01-11-2018 DOE78_24015 a9cc8987e94a0ccafc06f9b658742f38 339 SUPERFAMILY SSF69572 3 328 8.11E-81 T 01-11-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DOE78_24015 a9cc8987e94a0ccafc06f9b658742f38 339 Pfam PF00899 ThiF family 5 241 9.8E-59 T 01-11-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DOE78_02125 ef5da4cc0105aa923df1aa632c8990c5 280 Pfam PF01145 SPFH domain / Band 7 family 53 227 4.0E-26 T 01-11-2018 IPR001107 Band 7 domain DOE78_02125 ef5da4cc0105aa923df1aa632c8990c5 280 SMART SM00244 49 213 2.9E-14 T 01-11-2018 IPR001107 Band 7 domain DOE78_02125 ef5da4cc0105aa923df1aa632c8990c5 280 SUPERFAMILY SSF117892 88 216 7.59E-13 T 01-11-2018 IPR036013 Band 7/SPFH domain superfamily DOE78_02125 ef5da4cc0105aa923df1aa632c8990c5 280 Gene3D G3DSA:3.30.479.30 84 215 4.0E-11 T 01-11-2018 DOE78_16760 64e45c79ad4abba8aa6305425d6540d0 331 Pfam PF00676 Dehydrogenase E1 component 20 320 3.3E-107 T 01-11-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DOE78_16760 64e45c79ad4abba8aa6305425d6540d0 331 SUPERFAMILY SSF52518 10 330 7.86E-104 T 01-11-2018 IPR029061 Thiamin diphosphate-binding fold DOE78_16760 64e45c79ad4abba8aa6305425d6540d0 331 Gene3D G3DSA:3.40.50.970 3 331 2.2E-119 T 01-11-2018 DOE78_06275 083253fb3f57cad5cf3e582d3eb88c57 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 271 8.5E-21 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_06275 083253fb3f57cad5cf3e582d3eb88c57 280 Gene3D G3DSA:1.10.3720.10 1 267 4.9E-65 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_06275 083253fb3f57cad5cf3e582d3eb88c57 280 SUPERFAMILY SSF161098 5 280 3.27E-70 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_11850 a862173a62732fe16a961426d7fde3ae 181 Pfam PF13302 Acetyltransferase (GNAT) domain 8 152 1.2E-24 T 01-11-2018 IPR000182 GNAT domain DOE78_11850 a862173a62732fe16a961426d7fde3ae 181 Gene3D G3DSA:3.40.630.30 2 179 1.3E-49 T 01-11-2018 DOE78_11850 a862173a62732fe16a961426d7fde3ae 181 SUPERFAMILY SSF55729 2 176 5.12E-46 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_15530 4e2f31f7d4ce9bc8b52acb0711c0e9ee 65 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.6E-5 T 01-11-2018 DOE78_15530 4e2f31f7d4ce9bc8b52acb0711c0e9ee 65 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.6E-5 T 01-11-2018 DOE78_15530 4e2f31f7d4ce9bc8b52acb0711c0e9ee 65 Pfam PF02416 mttA/Hcf106 family 5 57 1.5E-21 T 01-11-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DOE78_15530 4e2f31f7d4ce9bc8b52acb0711c0e9ee 65 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 65 17.428 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DOE78_15530 4e2f31f7d4ce9bc8b52acb0711c0e9ee 65 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 49 2.9E-19 T 01-11-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DOE78_20990 6807a829431f311bd4002fe3b61462ac 79 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 4 78 5.0E-29 T 01-11-2018 DOE78_20990 6807a829431f311bd4002fe3b61462ac 79 Hamap MF_01542 UPF0349 protein . 2 78 29.314 T 01-11-2018 IPR022916 Protein of unknown function UPF0349 DOE78_20990 6807a829431f311bd4002fe3b61462ac 79 Pfam PF07293 Protein of unknown function (DUF1450) 2 76 3.4E-36 T 01-11-2018 IPR009910 Protein of unknown function DUF1450 DOE78_09220 87dd148c7887856281274afab403f49c 261 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 90 258 4.7E-11 T 01-11-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DOE78_09220 87dd148c7887856281274afab403f49c 261 SUPERFAMILY SSF56529 7 261 1.44E-75 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_09220 87dd148c7887856281274afab403f49c 261 Gene3D G3DSA:3.90.850.10 1 261 5.8E-81 T 01-11-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DOE78_04735 51b244015d7abe4c8ed16d2d9af4796f 455 Pfam PF12733 Cadherin-like beta sandwich domain 57 135 6.9E-10 T 01-11-2018 IPR025883 Cadherin-like beta sandwich domain DOE78_04735 51b244015d7abe4c8ed16d2d9af4796f 455 Pfam PF12733 Cadherin-like beta sandwich domain 143 230 2.1E-17 T 01-11-2018 IPR025883 Cadherin-like beta sandwich domain DOE78_04735 51b244015d7abe4c8ed16d2d9af4796f 455 Pfam PF12733 Cadherin-like beta sandwich domain 302 383 3.5E-10 T 01-11-2018 IPR025883 Cadherin-like beta sandwich domain DOE78_10615 3c10fbf39314021c32e55646f08f00ab 66 SUPERFAMILY SSF140500 13 60 3.53E-10 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_10615 3c10fbf39314021c32e55646f08f00ab 66 Gene3D G3DSA:1.20.58.990 12 66 3.7E-7 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_10615 3c10fbf39314021c32e55646f08f00ab 66 Pfam PF09388 Spo0E like sporulation regulatory protein 15 54 2.0E-9 T 01-11-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DOE78_11745 e190959e527bbeeb8bdfc82bc77d7903 225 Gene3D G3DSA:3.10.105.10 1 195 1.3E-49 T 01-11-2018 DOE78_11745 e190959e527bbeeb8bdfc82bc77d7903 225 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 1 134 2.2E-28 T 01-11-2018 IPR000914 Solute-binding protein family 5 domain DOE78_11745 e190959e527bbeeb8bdfc82bc77d7903 225 SUPERFAMILY SSF53850 1 204 2.9E-46 T 01-11-2018 DOE78_14460 539f5aff9fe339b548100fe1b05d7268 45 Pfam PF14149 YhfH-like protein 2 38 1.3E-19 T 01-11-2018 IPR025432 YhfH-like protein DOE78_07045 7bdda5c600d77f4cad7d3e60a52d3e2c 72 Pfam PF09388 Spo0E like sporulation regulatory protein 4 42 3.5E-14 T 01-11-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DOE78_07045 7bdda5c600d77f4cad7d3e60a52d3e2c 72 Gene3D G3DSA:1.20.58.990 1 60 1.5E-9 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_07045 7bdda5c600d77f4cad7d3e60a52d3e2c 72 SUPERFAMILY SSF140500 1 49 2.35E-13 T 01-11-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DOE78_10380 dac68e3888b196b4e42aa6b935396119 314 SUPERFAMILY SSF54593 2 292 1.98E-49 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10380 dac68e3888b196b4e42aa6b935396119 314 Gene3D G3DSA:3.10.180.10 66 209 1.6E-116 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_10380 dac68e3888b196b4e42aa6b935396119 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 3.1E-14 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_10380 dac68e3888b196b4e42aa6b935396119 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 162 265 4.9E-10 T 01-11-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DOE78_10380 dac68e3888b196b4e42aa6b935396119 314 Gene3D G3DSA:3.10.180.10 6 302 1.6E-116 T 01-11-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DOE78_02055 46840b3888084d7b7ccc27ff13cc2505 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 73 1.6E-12 T 01-11-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DOE78_02055 46840b3888084d7b7ccc27ff13cc2505 283 SUPERFAMILY SSF53697 100 278 2.67E-26 T 01-11-2018 DOE78_02055 46840b3888084d7b7ccc27ff13cc2505 283 SUPERFAMILY SSF46689 2 78 2.33E-17 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_02055 46840b3888084d7b7ccc27ff13cc2505 283 Gene3D G3DSA:3.40.50.10490 94 278 2.9E-35 T 01-11-2018 DOE78_02055 46840b3888084d7b7ccc27ff13cc2505 283 Gene3D G3DSA:1.10.10.10 1 76 2.1E-20 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_02055 46840b3888084d7b7ccc27ff13cc2505 283 Pfam PF01380 SIS domain 128 253 1.4E-17 T 01-11-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DOE78_19175 e8e5876bf69635772e8b0d86124535df 210 SUPERFAMILY SSF55729 42 117 1.63E-7 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_19175 e8e5876bf69635772e8b0d86124535df 210 Pfam PF00583 Acetyltransferase (GNAT) family 39 117 1.5E-4 T 01-11-2018 IPR000182 GNAT domain DOE78_19175 e8e5876bf69635772e8b0d86124535df 210 PIRSF PIRSF021278 2 210 6.4E-87 T 01-11-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 DOE78_19175 e8e5876bf69635772e8b0d86124535df 210 Gene3D G3DSA:3.40.630.30 2 210 1.7E-84 T 01-11-2018 DOE78_13905 440f91acd3a432319a150e3de96ca653 116 Gene3D G3DSA:1.10.357.10 1 110 3.1E-15 T 01-11-2018 DOE78_13905 440f91acd3a432319a150e3de96ca653 116 Pfam PF14278 Transcriptional regulator C-terminal region 23 94 7.0E-14 T 01-11-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type DOE78_01170 45c71b3843ce88f98ab2b3a3d83a23fb 51 Pfam PF14139 YpzG-like protein 1 50 2.5E-19 T 01-11-2018 IPR025413 YpzG-like protein DOE78_05030 64a24acf758a3a1bb2ca7cb8cf609b67 270 SUPERFAMILY SSF55729 16 128 1.8E-8 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_05030 64a24acf758a3a1bb2ca7cb8cf609b67 270 Gene3D G3DSA:3.40.630.30 10 141 9.9E-6 T 01-11-2018 DOE78_11640 e3e060f4b567914b61e8f766ce12e826 129 PIRSF PIRSF031804 1 119 2.4E-40 T 01-11-2018 IPR016983 Uncharacterised conserved protein UCP031804 DOE78_11640 e3e060f4b567914b61e8f766ce12e826 129 Pfam PF06803 Protein of unknown function (DUF1232) 54 88 9.8E-13 T 01-11-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 DOE78_12605 262a8424f7fd5090cfebef10c22b83b8 241 Pfam PF02535 ZIP Zinc transporter 88 236 7.6E-18 T 01-11-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 PRINTS PR00845 Glycosyl hydrolase family 52 signature 333 362 1.3E-81 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 PRINTS PR00845 Glycosyl hydrolase family 52 signature 133 153 1.3E-81 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 PRINTS PR00845 Glycosyl hydrolase family 52 signature 260 280 1.3E-81 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 PRINTS PR00845 Glycosyl hydrolase family 52 signature 20 47 1.3E-81 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 PRINTS PR00845 Glycosyl hydrolase family 52 signature 419 439 1.3E-81 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 PRINTS PR00845 Glycosyl hydrolase family 52 signature 86 113 1.3E-81 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 PRINTS PR00845 Glycosyl hydrolase family 52 signature 306 332 1.3E-81 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 SUPERFAMILY SSF48208 273 590 1.48E-6 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_20130 a3784333404cd34582a587cb81a79d1b 716 Pfam PF03512 Glycosyl hydrolase family 52 20 438 3.4E-174 T 01-11-2018 IPR000852 Glycoside hydrolase, family 52 GO:0005975|GO:0009044 KEGG: 00520+3.2.1.37|MetaCyc: PWY-6717 DOE78_18305 7da5f2a2444aa5ed20cdec0b7f56174a 345 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 2.7E-114 T 01-11-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DOE78_18305 7da5f2a2444aa5ed20cdec0b7f56174a 345 Gene3D G3DSA:3.30.930.10 8 343 8.5E-127 T 01-11-2018 DOE78_18305 7da5f2a2444aa5ed20cdec0b7f56174a 345 SUPERFAMILY SSF46589 15 100 1.31E-23 T 01-11-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DOE78_18305 7da5f2a2444aa5ed20cdec0b7f56174a 345 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 49.268 T 01-11-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DOE78_18305 7da5f2a2444aa5ed20cdec0b7f56174a 345 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 88 6.2E-26 T 01-11-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DOE78_18305 7da5f2a2444aa5ed20cdec0b7f56174a 345 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 3.8E-109 T 01-11-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DOE78_18305 7da5f2a2444aa5ed20cdec0b7f56174a 345 SUPERFAMILY SSF55681 93 342 4.62E-83 T 01-11-2018 DOE78_15460 9d357dcc1e415aadd248982d057a0aa4 53 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 25 49 3.4E-14 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_15460 9d357dcc1e415aadd248982d057a0aa4 53 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 26 49 1.9E-12 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_17095 cf6a1e79acf892f3341e507d45b7f1a3 351 Gene3D G3DSA:3.40.50.12710 2 350 1.1E-91 T 01-11-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 DOE78_17095 cf6a1e79acf892f3341e507d45b7f1a3 351 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 54 278 1.4E-37 T 01-11-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 DOE78_17095 cf6a1e79acf892f3341e507d45b7f1a3 351 SUPERFAMILY SSF53335 7 345 6.13E-79 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_22480 7b49652cbcf497822281dc3858174fb7 313 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 13 287 2.8E-27 T 01-11-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DOE78_02535 1cd3ded1ecf885494a14e159f41afb5f 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 311 2.7E-42 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_11760 38625f8d29098b529aae15607542341b 393 Gene3D G3DSA:2.60.40.790 317 391 1.6E-20 T 01-11-2018 IPR008978 HSP20-like chaperone DOE78_11760 38625f8d29098b529aae15607542341b 393 Pfam PF02374 Anion-transporting ATPase 1 300 2.6E-94 T 01-11-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 DOE78_11760 38625f8d29098b529aae15607542341b 393 SUPERFAMILY SSF52540 1 297 5.96E-45 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11760 38625f8d29098b529aae15607542341b 393 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 6 300 2.6E-78 T 01-11-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 DOE78_11760 38625f8d29098b529aae15607542341b 393 Gene3D G3DSA:3.40.50.300 1 313 2.1E-81 T 01-11-2018 DOE78_06115 2641bd5e3704745332817c241b0e84eb 424 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 49 204 1.1E-21 T 01-11-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 DOE78_06115 2641bd5e3704745332817c241b0e84eb 424 Gene3D G3DSA:3.30.2010.10 204 285 2.8E-23 T 01-11-2018 DOE78_06115 2641bd5e3704745332817c241b0e84eb 424 Pfam PF01435 Peptidase family M48 208 416 1.8E-34 T 01-11-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DOE78_12975 e30e8a47a7d5a1aaa408fe149888ed3e 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 414 6.2E-70 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_12975 e30e8a47a7d5a1aaa408fe149888ed3e 441 Pfam PF01554 MatE 20 180 1.8E-22 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_12975 e30e8a47a7d5a1aaa408fe149888ed3e 441 Pfam PF01554 MatE 249 396 3.4E-12 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_01705 83e9a0da1f51b59b3f42d549a1d27492 310 Pfam PF00482 Type II secretion system (T2SS), protein F 144 268 1.2E-19 T 01-11-2018 IPR018076 Type II secretion system F domain DOE78_01705 83e9a0da1f51b59b3f42d549a1d27492 310 Gene3D G3DSA:1.20.81.30 133 246 2.6E-13 T 01-11-2018 DOE78_06125 f57967fa0e7cd1975c4755173642ede8 185 Pfam PF06338 ComK protein 9 157 2.1E-54 T 01-11-2018 IPR010461 Competence protein ComK GO:0030420 DOE78_06125 f57967fa0e7cd1975c4755173642ede8 185 PIRSF PIRSF011560 3 183 9.4E-58 T 01-11-2018 IPR010461 Competence protein ComK GO:0030420 DOE78_03450 d314fad59a206451b54c564780f7b928 161 SMART SM00226 2 149 5.1E-52 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I DOE78_03450 d314fad59a206451b54c564780f7b928 161 SUPERFAMILY SSF52788 1 150 7.72E-48 T 01-11-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DOE78_03450 d314fad59a206451b54c564780f7b928 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 2.1E-16 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DOE78_03450 d314fad59a206451b54c564780f7b928 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 2.1E-16 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DOE78_03450 d314fad59a206451b54c564780f7b928 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.1E-16 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DOE78_03450 d314fad59a206451b54c564780f7b928 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 104 117 2.1E-16 T 01-11-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DOE78_03450 d314fad59a206451b54c564780f7b928 161 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 147 1.8E-44 T 01-11-2018 IPR023485 Phosphotyrosine protein phosphatase I DOE78_03450 d314fad59a206451b54c564780f7b928 161 Gene3D G3DSA:3.40.50.2300 1 156 1.2E-61 T 01-11-2018 DOE78_23815 df437c6c042a37a895935ec02d21a15b 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 405 5.5E-92 T 01-11-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DOE78_23815 df437c6c042a37a895935ec02d21a15b 428 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 2.7E-169 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_23815 df437c6c042a37a895935ec02d21a15b 428 Gene3D G3DSA:3.65.10.10 21 228 6.9E-159 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DOE78_23815 df437c6c042a37a895935ec02d21a15b 428 Gene3D G3DSA:3.65.10.10 6 412 6.9E-159 T 01-11-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DOE78_23815 df437c6c042a37a895935ec02d21a15b 428 SUPERFAMILY SSF55205 1 414 1.8E-133 T 01-11-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DOE78_23815 df437c6c042a37a895935ec02d21a15b 428 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 42.02 T 01-11-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DOE78_16375 c68e41b516969de339f3b93f388adc89 247 Pfam PF02616 Segregation and condensation protein ScpA 20 242 1.8E-60 T 01-11-2018 IPR003768 Segregation and condensation protein A DOE78_16375 c68e41b516969de339f3b93f388adc89 247 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 246 27.176 T 01-11-2018 IPR003768 Segregation and condensation protein A DOE78_19900 573cc13f42365a8aef15f20987800b3e 335 Pfam PF11553 Protein of unknown function (DUF3231) 12 160 4.4E-35 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_19900 573cc13f42365a8aef15f20987800b3e 335 Pfam PF11553 Protein of unknown function (DUF3231) 176 334 2.6E-27 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_19900 573cc13f42365a8aef15f20987800b3e 335 Gene3D G3DSA:1.20.1260.10 2 151 1.5E-11 T 01-11-2018 IPR012347 Ferritin-like DOE78_12785 fe8f3d799cae60cb270884a6274f3c07 237 Pfam PF03824 High-affinity nickel-transport protein 4 233 9.4E-9 T 01-11-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DOE78_16385 83842a8de6d9a3228069e7eb491759a2 117 SUPERFAMILY SSF55729 34 112 2.33E-12 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_16385 83842a8de6d9a3228069e7eb491759a2 117 Gene3D G3DSA:3.40.630.30 5 113 2.8E-13 T 01-11-2018 DOE78_16385 83842a8de6d9a3228069e7eb491759a2 117 Pfam PF00583 Acetyltransferase (GNAT) family 39 112 1.5E-9 T 01-11-2018 IPR000182 GNAT domain DOE78_16220 9970d44360ca204ee2b75cd4b8034f24 192 PIRSF PIRSF029008 1 101 4.0E-23 T 01-11-2018 IPR008681 Negative regulator of genetic competence, MecA DOE78_16220 9970d44360ca204ee2b75cd4b8034f24 192 PIRSF PIRSF029008 92 192 7.0E-22 T 01-11-2018 IPR008681 Negative regulator of genetic competence, MecA DOE78_16220 9970d44360ca204ee2b75cd4b8034f24 192 Gene3D G3DSA:3.30.70.1950 102 192 7.2E-23 T 01-11-2018 IPR038471 MecA, C-terminal domain superfamily DOE78_16220 9970d44360ca204ee2b75cd4b8034f24 192 Pfam PF05389 Negative regulator of genetic competence (MecA) 99 187 3.3E-12 T 01-11-2018 IPR008681 Negative regulator of genetic competence, MecA DOE78_16220 9970d44360ca204ee2b75cd4b8034f24 192 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 86 7.2E-19 T 01-11-2018 IPR008681 Negative regulator of genetic competence, MecA DOE78_10065 03acda8bcc2aa442852695eaed3a47f6 150 SUPERFAMILY SSF55729 14 148 1.68E-30 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10065 03acda8bcc2aa442852695eaed3a47f6 150 Pfam PF00583 Acetyltransferase (GNAT) family 23 115 3.9E-14 T 01-11-2018 IPR000182 GNAT domain DOE78_10065 03acda8bcc2aa442852695eaed3a47f6 150 Gene3D G3DSA:3.40.630.30 1 150 2.3E-47 T 01-11-2018 DOE78_08635 dea75ee84cfbef4098d28fa5d0e4a881 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 28.401 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DOE78_08635 dea75ee84cfbef4098d28fa5d0e4a881 79 Pfam PF17209 Hfq protein 7 69 2.1E-31 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DOE78_08635 dea75ee84cfbef4098d28fa5d0e4a881 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 8.1E-31 T 01-11-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DOE78_08635 dea75ee84cfbef4098d28fa5d0e4a881 79 SUPERFAMILY SSF50182 6 64 7.98E-23 T 01-11-2018 IPR010920 LSM domain superfamily DOE78_08635 dea75ee84cfbef4098d28fa5d0e4a881 79 Gene3D G3DSA:2.30.30.100 1 74 3.0E-33 T 01-11-2018 DOE78_08250 98ad17042362c9f672ae1782b68e8388 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.4E-23 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DOE78_08250 98ad17042362c9f672ae1782b68e8388 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.4E-23 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DOE78_08250 98ad17042362c9f672ae1782b68e8388 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.4E-23 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DOE78_08250 98ad17042362c9f672ae1782b68e8388 89 PIRSF PIRSF004669 1 89 5.5E-35 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DOE78_08250 98ad17042362c9f672ae1782b68e8388 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 2 86 2.4E-34 T 01-11-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 DOE78_08250 98ad17042362c9f672ae1782b68e8388 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.3E-32 T 01-11-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DOE78_09400 5472b30c1cfe14296253cd087929bf77 281 Pfam PF01636 Phosphotransferase enzyme family 144 194 1.6E-9 T 01-11-2018 IPR002575 Aminoglycoside phosphotransferase DOE78_09400 5472b30c1cfe14296253cd087929bf77 281 SUPERFAMILY SSF56112 5 238 3.17E-23 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_09400 5472b30c1cfe14296253cd087929bf77 281 Gene3D G3DSA:3.90.1200.10 93 204 2.7E-12 T 01-11-2018 DOE78_09960 c815bbe75ea41ce90fbed7db4ca6c4c4 181 SUPERFAMILY SSF55729 5 171 2.84E-36 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09960 c815bbe75ea41ce90fbed7db4ca6c4c4 181 Pfam PF13302 Acetyltransferase (GNAT) domain 11 146 3.7E-16 T 01-11-2018 IPR000182 GNAT domain DOE78_09960 c815bbe75ea41ce90fbed7db4ca6c4c4 181 Gene3D G3DSA:3.40.630.30 2 181 1.4E-42 T 01-11-2018 DOE78_12610 a8a1d3bbfa5b03394dcede8a3930c63c 159 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 8 156 4.3E-43 T 01-11-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 DOE78_12610 a8a1d3bbfa5b03394dcede8a3930c63c 159 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 27 155 7.8E-27 T 01-11-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DOE78_11000 9d497888a99198b945b25e3e64f5dab4 197 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 187 1.9E-39 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_11870 624011ab45c1a54237fb428b17ddeeb0 421 Gene3D G3DSA:3.40.190.10 53 358 3.1E-129 T 01-11-2018 DOE78_11870 624011ab45c1a54237fb428b17ddeeb0 421 Gene3D G3DSA:3.40.190.10 143 406 3.1E-129 T 01-11-2018 DOE78_11870 624011ab45c1a54237fb428b17ddeeb0 421 SUPERFAMILY SSF53850 19 419 1.65E-74 T 01-11-2018 DOE78_11870 624011ab45c1a54237fb428b17ddeeb0 421 Pfam PF01547 Bacterial extracellular solute-binding protein 51 335 8.5E-32 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_15680 00891c4926eaed9f3433d16dfa512de7 176 Pfam PF02417 Chromate transporter 5 171 1.2E-37 T 01-11-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DOE78_06785 5201ac920d4365f405440ae8ac7a1e5b 175 Pfam PF08905 Domain of unknown function (DUF1850) 54 144 3.3E-20 T 01-11-2018 IPR015001 Protein of unknown function DUF1850 DOE78_01770 2328062f7649fa5449e250bd0a0b22db 401 Pfam PF01882 Protein of unknown function DUF58 202 275 2.1E-21 T 01-11-2018 IPR002881 Domain of unknown function DUF58 DOE78_18780 77d839eb76696d3122e17b460cc588d8 72 Pfam PF04531 Bacteriophage holin 7 70 2.2E-6 T 01-11-2018 IPR006485 Bacteriophage holin DOE78_16950 ba294445698b347c27c0b070864d5274 225 Gene3D G3DSA:3.30.70.2970 34 140 2.2E-47 T 01-11-2018 DOE78_16950 ba294445698b347c27c0b070864d5274 225 Gene3D G3DSA:3.30.110.170 24 222 2.2E-47 T 01-11-2018 DOE78_16950 ba294445698b347c27c0b070864d5274 225 Pfam PF04402 Protein of unknown function (DUF541) 22 221 2.0E-37 T 01-11-2018 IPR007497 Protein of unknown function DUF541 DOE78_11030 6b1e0a31dc6e1251e50dfff773895b7f 118 Pfam PF13789 Domain of unknown function (DUF4181) 13 114 1.0E-11 T 01-11-2018 IPR025441 Protein of unknown function DUF4181 DOE78_19440 364de4706d7fe8395ef665e923c26814 191 SUPERFAMILY SSF53335 4 151 1.14E-23 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_19440 364de4706d7fe8395ef665e923c26814 191 Gene3D G3DSA:3.40.50.150 1 191 8.9E-69 T 01-11-2018 DOE78_19440 364de4706d7fe8395ef665e923c26814 191 Pfam PF06962 Putative rRNA methylase 48 188 9.8E-54 T 01-11-2018 IPR010719 Putative rRNA methylase DOE78_20725 64e5e516b2b523f1a8aeace59110337f 83 ProDom PD059965 SASP SPORULATION-SPECIFIC SIGMA-G-DEPENDENT SPORULATION SPECIFIC CSGA 1 83 1.0E-15 T 01-11-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein DOE78_20725 64e5e516b2b523f1a8aeace59110337f 83 Pfam PF17334 Sigma-G-dependent sporulation-specific SASP protein 1 83 9.3E-35 T 01-11-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein DOE78_19055 bfdc64d3da90c900119bf949e3e9a52e 138 Gene3D G3DSA:3.40.1350.10 2 121 2.0E-9 T 01-11-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DOE78_02325 855a4101708aac76e0491f9e83e3f1da 255 SUPERFAMILY SSF51182 28 154 2.09E-24 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_02325 855a4101708aac76e0491f9e83e3f1da 255 Gene3D G3DSA:2.60.120.10 48 174 1.7E-40 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_02325 855a4101708aac76e0491f9e83e3f1da 255 Pfam PF07883 Cupin domain 73 148 1.3E-10 T 01-11-2018 IPR013096 Cupin 2, conserved barrel DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 PIRSF PIRSF005900 2 148 9.1E-47 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 ProSitePatterns PS00819 Dps protein family signature 2. 53 67 - T 01-11-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 Pfam PF00210 Ferritin-like domain 8 145 4.2E-30 T 01-11-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 SUPERFAMILY SSF47240 4 145 2.79E-44 T 01-11-2018 IPR009078 Ferritin-like superfamily DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 Gene3D G3DSA:1.20.1260.10 2 147 2.1E-51 T 01-11-2018 IPR012347 Ferritin-like DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 27 43 5.2E-15 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 5.2E-15 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 5.2E-15 T 01-11-2018 IPR002177 DNA-binding protein Dps DOE78_19530 efca47ecf18285d4880a0cdc8ae9d015 148 ProSitePatterns PS00818 Dps protein family signature 1. 27 43 - T 01-11-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DOE78_05500 801ca8556419d8d7c9c944bc9bb63696 1082 SUPERFAMILY SSF51445 409 765 6.66E-14 T 01-11-2018 IPR017853 Glycoside hydrolase superfamily DOE78_05500 801ca8556419d8d7c9c944bc9bb63696 1082 Gene3D G3DSA:3.20.20.80 529 783 9.2E-6 T 01-11-2018 DOE78_05500 801ca8556419d8d7c9c944bc9bb63696 1082 Gene3D G3DSA:3.20.20.80 379 514 3.7E-7 T 01-11-2018 DOE78_04390 942a7ee93ea230eb83ba8e6f3674d8c4 316 SUPERFAMILY SSF75005 8 312 8.34E-72 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_04390 942a7ee93ea230eb83ba8e6f3674d8c4 316 Gene3D G3DSA:2.115.10.20 1 315 1.1E-97 T 01-11-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DOE78_04390 942a7ee93ea230eb83ba8e6f3674d8c4 316 Pfam PF04616 Glycosyl hydrolases family 43 8 306 6.7E-70 T 01-11-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DOE78_04390 942a7ee93ea230eb83ba8e6f3674d8c4 316 PIRSF PIRSF025414 1 316 3.2E-153 T 01-11-2018 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 DOE78_02610 728d251e8a269827939e73099178d502 193 Pfam PF14066 Protein of unknown function (DUF4256) 21 193 8.8E-94 T 01-11-2018 IPR025352 Protein of unknown function DUF4256 DOE78_14880 212345fd5359c64d71b16d9810966d16 326 SUPERFAMILY SSF103473 18 319 9.42E-5 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_14880 212345fd5359c64d71b16d9810966d16 326 Pfam PF12679 ABC-2 family transporter protein 5 324 1.5E-23 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DOE78_20505 c42881792da880857c3844ebd23ad293 359 Pfam PF14897 EpsG family 39 345 3.1E-55 T 01-11-2018 DOE78_11060 0f1967bd29e3d8edc1376aaac762f4af 132 Gene3D G3DSA:3.90.79.10 1 130 6.6E-30 T 01-11-2018 DOE78_11060 0f1967bd29e3d8edc1376aaac762f4af 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 01-11-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DOE78_11060 0f1967bd29e3d8edc1376aaac762f4af 132 SUPERFAMILY SSF55811 3 130 7.18E-31 T 01-11-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DOE78_11060 0f1967bd29e3d8edc1376aaac762f4af 132 Pfam PF00293 NUDIX domain 5 119 1.5E-14 T 01-11-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DOE78_19790 dbe0504dbcb41ef9df80d58d38ebad1e 365 SUPERFAMILY SSF63829 23 333 4.9E-24 T 01-11-2018 DOE78_19790 dbe0504dbcb41ef9df80d58d38ebad1e 365 Gene3D G3DSA:2.120.10.30 9 359 6.5E-121 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_19790 dbe0504dbcb41ef9df80d58d38ebad1e 365 Pfam PF03022 Major royal jelly protein 80 347 3.9E-33 T 01-11-2018 IPR017996 Major royal jelly protein/protein yellow DOE78_24330 ea91d764671d62d548f41eb45c9ab034 101 SUPERFAMILY SSF52794 1 100 2.56E-35 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_24330 ea91d764671d62d548f41eb45c9ab034 101 Gene3D G3DSA:3.40.50.2300 1 101 1.0E-37 T 01-11-2018 DOE78_24330 ea91d764671d62d548f41eb45c9ab034 101 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 5.6E-33 T 01-11-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 DOE78_24330 ea91d764671d62d548f41eb45c9ab034 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 2.8E-22 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_05750 42d0ebbfa4f26f3206442c6e21ddd088 423 Pfam PF07690 Major Facilitator Superfamily 16 369 8.5E-18 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_05750 42d0ebbfa4f26f3206442c6e21ddd088 423 Gene3D G3DSA:1.20.1250.20 7 408 1.7E-29 T 01-11-2018 DOE78_05750 42d0ebbfa4f26f3206442c6e21ddd088 423 SUPERFAMILY SSF103473 10 410 4.45E-32 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_19215 7b3b59b444d1513c8e66b860d114bc05 108 Gene3D G3DSA:3.40.30.10 1 104 4.3E-36 T 01-11-2018 DOE78_19215 7b3b59b444d1513c8e66b860d114bc05 108 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 3 100 6.4E-34 T 01-11-2018 IPR022551 Protein of unknown function DUF2847 DOE78_19215 7b3b59b444d1513c8e66b860d114bc05 108 Pfam PF11009 Protein of unknown function (DUF2847) 3 99 6.8E-33 T 01-11-2018 IPR022551 Protein of unknown function DUF2847 DOE78_24385 b0653c0acffd70b2d3f51f998fe06eea 195 Pfam PF02525 Flavodoxin-like fold 1 188 1.1E-38 T 01-11-2018 IPR003680 Flavodoxin-like fold DOE78_24385 b0653c0acffd70b2d3f51f998fe06eea 195 Gene3D G3DSA:3.40.50.360 1 193 1.1E-46 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_24385 b0653c0acffd70b2d3f51f998fe06eea 195 SUPERFAMILY SSF52218 1 193 3.19E-43 T 01-11-2018 IPR029039 Flavoprotein-like superfamily DOE78_10830 4a1db70c3b4928bfaa5280a4e09301fd 133 Pfam PF02082 Transcriptional regulator 1 83 5.7E-27 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_10830 4a1db70c3b4928bfaa5280a4e09301fd 133 Gene3D G3DSA:1.10.10.10 1 132 4.1E-32 T 01-11-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DOE78_10830 4a1db70c3b4928bfaa5280a4e09301fd 133 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 126 7.3E-36 T 01-11-2018 IPR000944 Transcription regulator Rrf2-type DOE78_10830 4a1db70c3b4928bfaa5280a4e09301fd 133 SUPERFAMILY SSF46785 2 129 8.59E-31 T 01-11-2018 IPR036390 Winged helix DNA-binding domain superfamily DOE78_07805 5ca0c6f756fdab24a04a676dcbfa8213 174 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 1.6E-18 T 01-11-2018 IPR019933 DivIVA domain DOE78_07805 5ca0c6f756fdab24a04a676dcbfa8213 174 Pfam PF05103 DivIVA protein 3 133 4.3E-52 T 01-11-2018 IPR007793 DivIVA family DOE78_10595 a4d8fc47593a03dc8a6fb70aa117c9e6 857 SUPERFAMILY SSF69318 151 712 2.35E-20 T 01-11-2018 DOE78_10595 a4d8fc47593a03dc8a6fb70aa117c9e6 857 Gene3D G3DSA:2.60.40.10 41 138 7.2E-25 T 01-11-2018 IPR013783 Immunoglobulin-like fold DOE78_06980 822bc3c54057079aa4f4ac9a37775338 344 Pfam PF01757 Acyltransferase family 6 307 4.3E-22 T 01-11-2018 IPR002656 Acyltransferase 3 GO:0016747 DOE78_20250 4290171ca2c4a87421fd9dd94cdaf7eb 242 Pfam PF09347 Domain of unknown function (DUF1989) 8 179 1.1E-52 T 01-11-2018 IPR018959 Protein of unknown function DUF1989 DOE78_20250 4290171ca2c4a87421fd9dd94cdaf7eb 242 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 5 234 2.1E-93 T 01-11-2018 IPR017792 Urea carboxylase-associated protein 2 DOE78_17155 7b657f732a346c2cdd86cfe9906ea793 258 Pfam PF01940 Integral membrane protein DUF92 11 248 1.7E-60 T 01-11-2018 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 DOE78_09430 babfa9fb4b8f15af270be265d2e0dd64 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 2.3E-20 T 01-11-2018 DOE78_09430 babfa9fb4b8f15af270be265d2e0dd64 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 2.3E-20 T 01-11-2018 DOE78_09430 babfa9fb4b8f15af270be265d2e0dd64 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 2.3E-20 T 01-11-2018 DOE78_09430 babfa9fb4b8f15af270be265d2e0dd64 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 2.3E-20 T 01-11-2018 DOE78_09430 babfa9fb4b8f15af270be265d2e0dd64 387 Pfam PF01494 FAD binding domain 8 341 2.6E-27 T 01-11-2018 IPR002938 FAD-binding domain GO:0071949 DOE78_09430 babfa9fb4b8f15af270be265d2e0dd64 387 SUPERFAMILY SSF51905 8 350 3.56E-59 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_09430 babfa9fb4b8f15af270be265d2e0dd64 387 Gene3D G3DSA:3.50.50.60 7 359 1.0E-73 T 01-11-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DOE78_13090 14f41cb0cf55a7f2fbf7800825391ee2 147 Gene3D G3DSA:1.20.20.10 1 75 2.5E-5 T 01-11-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DOE78_20840 c4c78aba262d663bc427fbc2d71c7eca 185 Pfam PF17328 Family of unknown function (DUF5366) 30 184 7.3E-61 T 01-11-2018 IPR035289 Protein of unknown function DUF5366 DOE78_20840 c4c78aba262d663bc427fbc2d71c7eca 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 185 1.0E-30 T 01-11-2018 IPR035289 Protein of unknown function DUF5366 DOE78_18970 c480807a851537a358de59e1e32f58cf 60 SMART SM00834 1 40 5.5E-10 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain DOE78_18970 c480807a851537a358de59e1e32f58cf 60 Pfam PF09723 Zinc ribbon domain 1 37 1.1E-10 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain DOE78_18970 c480807a851537a358de59e1e32f58cf 60 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 44 2.2E-12 T 01-11-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain DOE78_24100 d70723739828ec21c5b1cb38878f4719 364 Gene3D G3DSA:3.40.50.300 6 75 4.2E-5 T 01-11-2018 DOE78_24100 d70723739828ec21c5b1cb38878f4719 364 SUPERFAMILY SSF52540 28 66 1.81E-7 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_24100 d70723739828ec21c5b1cb38878f4719 364 SUPERFAMILY SSF52540 215 320 1.72E-7 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_05740 d39670b3876c8c2d7520f32e8b98cdd2 153 Pfam PF01381 Helix-turn-helix 15 62 3.6E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_05740 d39670b3876c8c2d7520f32e8b98cdd2 153 Gene3D G3DSA:1.10.260.40 1 81 2.0E-10 T 01-11-2018 DOE78_05740 d39670b3876c8c2d7520f32e8b98cdd2 153 SUPERFAMILY SSF47413 7 63 4.83E-11 T 01-11-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DOE78_05740 d39670b3876c8c2d7520f32e8b98cdd2 153 SMART SM00530 13 68 3.3E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_13010 7e41c18c7e404ec7a934ac7bd227bf29 355 Pfam PF04443 Acyl-protein synthetase, LuxE 11 346 3.0E-30 T 01-11-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 DOE78_13010 7e41c18c7e404ec7a934ac7bd227bf29 355 Gene3D G3DSA:3.40.50.12780 11 311 2.3E-19 T 01-11-2018 DOE78_07975 812e5a4096c4757956cbcc401e76e376 120 Pfam PF03780 Asp23 family, cell envelope-related function 10 116 2.7E-37 T 01-11-2018 IPR005531 Alkaline shock protein Asp23 DOE78_07790 e34ae8f82e6dfe76855ac9c4842508e7 149 Gene3D G3DSA:3.30.110.150 53 149 3.1E-36 T 01-11-2018 IPR038594 SepF-like superfamily DOE78_07790 e34ae8f82e6dfe76855ac9c4842508e7 149 Hamap MF_01197 Cell division protein SepF [sepF]. 1 139 20.922 T 01-11-2018 IPR023052 Cell division protein SepF GO:0090529 DOE78_07790 e34ae8f82e6dfe76855ac9c4842508e7 149 Pfam PF04472 Cell division protein SepF 60 131 3.8E-31 T 01-11-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 DOE78_22585 e710743263b430663be66924a7a6d0ee 420 Pfam PF03611 PTS system sugar-specific permease component 11 393 1.7E-88 T 01-11-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DOE78_22585 e710743263b430663be66924a7a6d0ee 420 PIRSF PIRSF006304 4 420 3.1E-164 T 01-11-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DOE78_22585 e710743263b430663be66924a7a6d0ee 420 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 11 417 7.4E-182 T 01-11-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DOE78_09640 716eab1707983d10e2dc7e65eac79610 225 Gene3D G3DSA:3.40.109.10 2 225 3.0E-61 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_09640 716eab1707983d10e2dc7e65eac79610 225 SUPERFAMILY SSF55469 11 224 1.3E-57 T 01-11-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DOE78_09640 716eab1707983d10e2dc7e65eac79610 225 Pfam PF00881 Nitroreductase family 17 204 8.0E-27 T 01-11-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DOE78_06510 e9366537eb364e9106ddf3d9e7c0fe40 62 Pfam PF11151 Protein of unknown function (DUF2929) 1 55 4.1E-19 T 01-11-2018 IPR021324 Protein of unknown function DUF2929 DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 SUPERFAMILY SSF75625 1 238 2.75E-79 T 01-11-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 Gene3D G3DSA:1.10.10.200 2 79 2.0E-23 T 01-11-2018 IPR017856 Integrase-like, N-terminal DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 Gene3D G3DSA:3.30.70.980 83 234 9.8E-46 T 01-11-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 Pfam PF01709 Transcriptional regulator 4 235 5.2E-80 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 Gene3D G3DSA:3.30.70.980 131 201 9.8E-46 T 01-11-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.248 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 1.2E-70 T 01-11-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DOE78_14860 9578733b87639101416ef4e4bbb5e068 239 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.166 T 01-11-2018 IPR026562 Probable transcriptional regulatory protein YeeN DOE78_05735 39f943d2c5984ee741329044edf26bb4 54 Pfam PF12669 Virus attachment protein p12 family 3 46 3.6E-8 T 01-11-2018 DOE78_01310 0746067d250d4ff3d7022ed49c503ee2 487 Pfam PF03703 Bacterial PH domain 253 332 2.0E-15 T 01-11-2018 IPR005182 Domain of unknown function DUF304 DOE78_01310 0746067d250d4ff3d7022ed49c503ee2 487 Pfam PF03703 Bacterial PH domain 399 479 1.4E-6 T 01-11-2018 IPR005182 Domain of unknown function DUF304 DOE78_01310 0746067d250d4ff3d7022ed49c503ee2 487 Pfam PF03703 Bacterial PH domain 63 145 4.0E-19 T 01-11-2018 IPR005182 Domain of unknown function DUF304 DOE78_01310 0746067d250d4ff3d7022ed49c503ee2 487 PIRSF PIRSF026631 1 486 4.5E-125 T 01-11-2018 IPR014529 Uncharacterised conserved protein UCP026631 DOE78_17385 042c56cbca2533bf796ce89d240d852d 47 Pfam PF14006 YqzL-like protein 3 45 1.1E-22 T 01-11-2018 IPR025617 YqzL-like protein DOE78_14540 75aab4f1dbbe2e3a73e5c4a0f7f1505a 150 Gene3D G3DSA:2.60.40.420 31 150 5.2E-13 T 01-11-2018 IPR008972 Cupredoxin DOE78_14540 75aab4f1dbbe2e3a73e5c4a0f7f1505a 150 Pfam PF13473 Cupredoxin-like domain 60 136 2.6E-7 T 01-11-2018 IPR028096 EfeO-type cupredoxin-like domain DOE78_14540 75aab4f1dbbe2e3a73e5c4a0f7f1505a 150 SUPERFAMILY SSF49503 69 150 8.72E-12 T 01-11-2018 IPR008972 Cupredoxin DOE78_16780 bfe64fa11f18a84c64dd9845a4336626 301 Pfam PF01515 Phosphate acetyl/butaryl transferase 72 296 1.5E-48 T 01-11-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DOE78_16780 bfe64fa11f18a84c64dd9845a4336626 301 PIRSF PIRSF000428 1 301 3.8E-84 T 01-11-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DOE78_16780 bfe64fa11f18a84c64dd9845a4336626 301 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 4 298 4.3E-126 T 01-11-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 DOE78_16780 bfe64fa11f18a84c64dd9845a4336626 301 SUPERFAMILY SSF53659 3 299 5.28E-64 T 01-11-2018 DOE78_16780 bfe64fa11f18a84c64dd9845a4336626 301 Gene3D G3DSA:3.40.718.10 2 300 6.8E-107 T 01-11-2018 DOE78_13860 6196099ad5d83a1dd44323777a9692ca 106 TIGRFAM TIGR03601 B_an_ocin: bacteriocin, heterocycloanthracin/sonorensin family 1 80 9.7E-14 T 01-11-2018 IPR019890 Bacteriocin, heterocycloanthracin/sonorensin family DOE78_12170 407c620e9b92b0f77af0d56dcaae6a53 217 SUPERFAMILY SSF53300 7 157 1.41E-10 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_12170 407c620e9b92b0f77af0d56dcaae6a53 217 Gene3D G3DSA:3.40.50.410 6 166 4.1E-8 T 01-11-2018 IPR036465 von Willebrand factor A-like domain superfamily DOE78_16470 6abdfe646048cb74da0bb996a2bb2773 186 Pfam PF13302 Acetyltransferase (GNAT) domain 16 159 7.4E-25 T 01-11-2018 IPR000182 GNAT domain DOE78_16470 6abdfe646048cb74da0bb996a2bb2773 186 Gene3D G3DSA:3.40.630.30 6 185 3.9E-41 T 01-11-2018 DOE78_16470 6abdfe646048cb74da0bb996a2bb2773 186 SUPERFAMILY SSF55729 10 185 3.32E-39 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_14390 4a4ccb30073a3f143228b48bdada87b3 86 Pfam PF10752 Protein of unknown function (DUF2533) 2 84 7.3E-30 T 01-11-2018 IPR019688 Protein of unknown function DUF2533 DOE78_07815 eda6897c678320fa0ccb0ca9ced1c8b1 94 Gene3D G3DSA:1.20.120.910 5 85 3.4E-9 T 01-11-2018 DOE78_19570 c8b3acea297cc679a7237ab111168867 349 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 332 1.5E-32 T 01-11-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DOE78_12650 66f6dc9924da14b1addf13721c426c6c 306 Pfam PF08892 YqcI/YcgG family 82 296 1.4E-70 T 01-11-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG DOE78_12310 60d52b49689cfceb694d4cd20a285d0f 188 Gene3D G3DSA:1.20.5.170 98 146 6.9E-7 T 01-11-2018 DOE78_01095 d918bb519b9a42bf362befd7ae3ba899 126 Pfam PF02656 Domain of unknown function (DUF202) 17 85 5.8E-17 T 01-11-2018 IPR003807 Domain of unknown function DUF202 DOE78_15000 e659aaf15a542d63e2b19e3ad2c995f0 285 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 01-11-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DOE78_15000 e659aaf15a542d63e2b19e3ad2c995f0 285 SUPERFAMILY SSF56317 3 271 1.44E-56 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_15000 e659aaf15a542d63e2b19e3ad2c995f0 285 Gene3D G3DSA:3.60.110.10 2 284 1.6E-58 T 01-11-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DOE78_15000 e659aaf15a542d63e2b19e3ad2c995f0 285 Pfam PF00795 Carbon-nitrogen hydrolase 4 265 3.3E-28 T 01-11-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DOE78_01200 f60cd123e54d6ead378d8fa6058a701a 545 PIRSF PIRSF005690 5 501 5.6E-182 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_01200 f60cd123e54d6ead378d8fa6058a701a 545 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 21 487 5.9E-192 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_05855 e420f1c06b8585803b4615cbce3ba8a9 994 Gene3D G3DSA:3.40.50.300 805 989 2.6E-18 T 01-11-2018 DOE78_05855 e420f1c06b8585803b4615cbce3ba8a9 994 Gene3D G3DSA:3.40.50.300 1 266 4.4E-21 T 01-11-2018 DOE78_05855 e420f1c06b8585803b4615cbce3ba8a9 994 Pfam PF13514 AAA domain 1 204 1.7E-27 T 01-11-2018 IPR038734 Uncharacterized protein YhaN, AAA domain DOE78_05855 e420f1c06b8585803b4615cbce3ba8a9 994 SUPERFAMILY SSF52540 1 983 3.47E-13 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_23260 4f91c34a10d0f9172a08fd5c6016bfa3 454 Pfam PF01554 MatE 262 413 9.9E-9 T 01-11-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DOE78_12560 04b615d4b7a21f5c3af1adc6556eac4a 348 Gene3D G3DSA:3.40.33.10 37 347 1.3E-72 T 01-11-2018 IPR035940 CAP superfamily DOE78_12560 04b615d4b7a21f5c3af1adc6556eac4a 348 Pfam PF00188 Cysteine-rich secretory protein family 229 345 3.3E-13 T 01-11-2018 IPR014044 CAP domain DOE78_12560 04b615d4b7a21f5c3af1adc6556eac4a 348 SUPERFAMILY SSF55797 222 346 6.28E-24 T 01-11-2018 IPR035940 CAP superfamily DOE78_12560 04b615d4b7a21f5c3af1adc6556eac4a 348 Pfam PF14504 CAP-associated N-terminal 75 210 6.1E-36 T 01-11-2018 IPR029410 CAP-associated domain DOE78_00380 7245d35f581ba218f28c9615800bed8b 824 SMART SM00332 584 802 1.4E-4 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_00380 7245d35f581ba218f28c9615800bed8b 824 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 45 804 8.7E-268 T 01-11-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_00380 7245d35f581ba218f28c9615800bed8b 824 SMART SM00331 592 804 4.5E-53 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_00380 7245d35f581ba218f28c9615800bed8b 824 SUPERFAMILY SSF81606 594 804 2.75E-20 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_00380 7245d35f581ba218f28c9615800bed8b 824 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 619 804 2.1E-34 T 01-11-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_00380 7245d35f581ba218f28c9615800bed8b 824 Gene3D G3DSA:3.60.40.10 586 824 7.1E-52 T 01-11-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DOE78_00185 53c5c936f6d579d03e5275e99d5a20d6 67 Pfam PF10764 Inhibitor of sigma-G Gin 14 58 5.5E-19 T 01-11-2018 IPR019700 Anti-sigma-G factor Gin DOE78_03325 7e7d66ad42285a26d113348c0ecdfb40 316 Pfam PF01032 FecCD transport family 10 311 9.2E-64 T 01-11-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DOE78_03325 7e7d66ad42285a26d113348c0ecdfb40 316 Gene3D G3DSA:1.10.3470.10 2 313 9.8E-62 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_03325 7e7d66ad42285a26d113348c0ecdfb40 316 SUPERFAMILY SSF81345 5 312 2.88E-66 T 01-11-2018 IPR037294 ABC transporter, BtuC-like DOE78_03715 7e9065797673b6dcbd68ebfef3d613d3 316 Gene3D G3DSA:3.40.50.1980 39 161 6.7E-23 T 01-11-2018 DOE78_03715 7e9065797673b6dcbd68ebfef3d613d3 316 Gene3D G3DSA:3.40.50.1980 162 316 6.4E-39 T 01-11-2018 DOE78_03715 7e9065797673b6dcbd68ebfef3d613d3 316 Pfam PF01497 Periplasmic binding protein 68 288 9.2E-27 T 01-11-2018 IPR002491 ABC transporter periplasmic binding domain DOE78_03715 7e9065797673b6dcbd68ebfef3d613d3 316 SUPERFAMILY SSF53807 41 310 1.14E-50 T 01-11-2018 DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 Pfam PF02081 Tryptophan RNA-binding attenuator protein 8 75 1.2E-41 T 01-11-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 SUPERFAMILY SSF51219 9 76 1.05E-35 T 01-11-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 28 44 2.9E-36 T 01-11-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 11 28 2.9E-36 T 01-11-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 60 76 2.9E-36 T 01-11-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 44 60 2.9E-36 T 01-11-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 Hamap MF_00798 Transcription attenuation protein MtrB [mtrB]. 3 75 28.328 T 01-11-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DOE78_16100 9c1c7423f36419cd4dce90848fdc239e 79 Gene3D G3DSA:2.60.40.50 1 78 1.3E-42 T 01-11-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 Gene3D G3DSA:1.20.1250.20 2 381 1.5E-85 T 01-11-2018 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 SUPERFAMILY SSF103473 5 384 1.28E-78 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 Pfam PF07690 Major Facilitator Superfamily 10 324 1.5E-57 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 PRINTS PR01035 Tetracycline resistance protein signature 331 354 1.5E-34 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 PRINTS PR01035 Tetracycline resistance protein signature 243 263 1.5E-34 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 PRINTS PR01035 Tetracycline resistance protein signature 159 179 1.5E-34 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 PRINTS PR01035 Tetracycline resistance protein signature 131 153 1.5E-34 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 PRINTS PR01035 Tetracycline resistance protein signature 16 32 1.5E-34 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 PRINTS PR01035 Tetracycline resistance protein signature 271 292 1.5E-34 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_01675 25d0da14c9e7b1140de1f1b12a45c6e7 393 PRINTS PR01035 Tetracycline resistance protein signature 73 97 1.5E-34 T 01-11-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DOE78_20395 8f74fd87ae9dd5ba5ed12c7f45d4aa65 88 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 18 84 2.2E-13 T 01-11-2018 IPR008792 Coenzyme PQQ synthesis D DOE78_20395 8f74fd87ae9dd5ba5ed12c7f45d4aa65 88 Gene3D G3DSA:1.10.10.1150 5 85 3.8E-6 T 01-11-2018 DOE78_07260 c4417e9137792acee684d25ffc3554a2 334 SUPERFAMILY SSF56281 20 291 7.73E-50 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_07260 c4417e9137792acee684d25ffc3554a2 334 Pfam PF00753 Metallo-beta-lactamase superfamily 48 244 3.0E-23 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_07260 c4417e9137792acee684d25ffc3554a2 334 SMART SM00849 40 244 1.4E-27 T 01-11-2018 IPR001279 Metallo-beta-lactamase DOE78_07260 c4417e9137792acee684d25ffc3554a2 334 Gene3D G3DSA:3.60.15.10 24 288 1.4E-60 T 01-11-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DOE78_06850 89e696db31f73d07de7138fb61d38930 323 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 175 313 6.4E-24 T 01-11-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DOE78_06850 89e696db31f73d07de7138fb61d38930 323 Pfam PF03445 Putative nucleotidyltransferase DUF294 24 136 5.9E-32 T 01-11-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DOE78_21030 d2c55d762b98eec17bd9d72fdd1c39c1 333 SUPERFAMILY SSF56112 2 315 1.94E-12 T 01-11-2018 IPR011009 Protein kinase-like domain superfamily DOE78_21030 d2c55d762b98eec17bd9d72fdd1c39c1 333 Gene3D G3DSA:3.90.1200.10 88 313 1.6E-27 T 01-11-2018 DOE78_21030 d2c55d762b98eec17bd9d72fdd1c39c1 333 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 4 314 1.0E-115 T 01-11-2018 IPR014254 Spore coat protein YutH DOE78_07615 f15124bf7925ae7fda9697e2da6b3d72 174 Pfam PF02620 Uncharacterized ACR, COG1399 56 165 6.1E-22 T 01-11-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DOE78_20300 eb92b9443ed45e12b5b92d1503a2b361 382 SUPERFAMILY SSF103473 1 361 3.53E-55 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_20300 eb92b9443ed45e12b5b92d1503a2b361 382 Gene3D G3DSA:1.20.1250.20 1 360 1.0E-50 T 01-11-2018 DOE78_20300 eb92b9443ed45e12b5b92d1503a2b361 382 Pfam PF07690 Major Facilitator Superfamily 1 311 3.7E-43 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_18525 f1267bdd59f2c03fd81ef2d7b19470f9 102 Pfam PF14007 YtpI-like protein 5 90 1.5E-30 T 01-11-2018 IPR025618 YtpI-like protein DOE78_20365 b8270d7383c167c2f772d9e4c310601c 178 Pfam PF09335 SNARE associated Golgi protein 23 142 2.3E-17 T 01-11-2018 IPR032816 SNARE associated Golgi protein DOE78_13110 760b80d75008953f786f99a9e1893ea9 186 Gene3D G3DSA:3.10.450.40 120 186 2.5E-15 T 01-11-2018 DOE78_13110 760b80d75008953f786f99a9e1893ea9 186 Pfam PF03413 Peptidase propeptide and YPEB domain 125 182 3.5E-6 T 01-11-2018 IPR025711 PepSY domain DOE78_23835 f7d134d6f79144407be95880d54f16e3 175 Pfam PF10740 Domain of unknown function (DUF2529) 1 172 3.4E-61 T 01-11-2018 IPR019676 Domain of unknown function (DUF2529) DOE78_23835 f7d134d6f79144407be95880d54f16e3 175 Gene3D G3DSA:3.40.50.10490 1 175 1.0E-57 T 01-11-2018 DOE78_15050 1d6d88325522048618c5557ec098b3bf 207 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 201 37.503 T 01-11-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DOE78_15050 1d6d88325522048618c5557ec098b3bf 207 SUPERFAMILY SSF51366 2 199 7.06E-57 T 01-11-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DOE78_15050 1d6d88325522048618c5557ec098b3bf 207 Gene3D G3DSA:3.20.20.70 1 200 2.5E-70 T 01-11-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DOE78_15050 1d6d88325522048618c5557ec098b3bf 207 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 196 1.7E-51 T 01-11-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DOE78_08835 8a58afbbcff8f16b403508f603352ef3 369 Gene3D G3DSA:2.60.120.1390 161 369 1.2E-58 T 01-11-2018 DOE78_08835 8a58afbbcff8f16b403508f603352ef3 369 Pfam PF11175 Protein of unknown function (DUF2961) 91 350 7.5E-96 T 01-11-2018 IPR021345 Protein of unknown function DUF2961 DOE78_16230 ecd05c63a4316b31b503d10149c53c50 260 Gene3D G3DSA:3.60.21.10 43 230 5.4E-19 T 01-11-2018 IPR029052 Metallo-dependent phosphatase-like DOE78_16230 ecd05c63a4316b31b503d10149c53c50 260 SUPERFAMILY SSF56300 44 257 4.32E-28 T 01-11-2018 DOE78_16230 ecd05c63a4316b31b503d10149c53c50 260 Pfam PF00149 Calcineurin-like phosphoesterase 46 203 5.2E-11 T 01-11-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DOE78_05075 9c36928c7e8784a1c4561586edbff1aa 216 Pfam PF10646 Sporulation and spore germination 116 209 6.3E-9 T 01-11-2018 IPR019606 GerMN domain DOE78_05075 9c36928c7e8784a1c4561586edbff1aa 216 SMART SM00909 123 213 6.2E-4 T 01-11-2018 IPR019606 GerMN domain DOE78_23720 cde96291f628ef35e7bb19cef813f519 75 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 12 64 3.4E-18 T 01-11-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter DOE78_11600 39601f763775682660ac2b4a789b6283 940 SUPERFAMILY SSF52540 332 710 1.97E-30 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_11600 39601f763775682660ac2b4a789b6283 940 Pfam PF01935 Domain of unknown function DUF87 331 571 8.6E-10 T 01-11-2018 IPR002789 Helicase HerA, central domain DOE78_11600 39601f763775682660ac2b4a789b6283 940 Gene3D G3DSA:3.40.50.300 529 724 4.4E-28 T 01-11-2018 DOE78_11600 39601f763775682660ac2b4a789b6283 940 Gene3D G3DSA:3.40.50.300 322 424 2.6E-10 T 01-11-2018 DOE78_11130 ce737ca383a182b4b7009b0524a2e94a 616 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 15 357 2.3E-131 T 01-11-2018 IPR016624 Uncharacterised conserved protein UCP014753 DOE78_11130 ce737ca383a182b4b7009b0524a2e94a 616 PIRSF PIRSF014753 3 606 1.2E-181 T 01-11-2018 IPR016624 Uncharacterised conserved protein UCP014753 DOE78_23010 f63501c2badd5e73ae0cf65ebba32e70 443 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 333 419 3.9E-14 T 01-11-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DOE78_23010 f63501c2badd5e73ae0cf65ebba32e70 443 Pfam PF01943 Polysaccharide biosynthesis protein 9 283 1.5E-21 T 01-11-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DOE78_21420 4f5f8b15ad877e93244b6e56fd3e092e 297 Gene3D G3DSA:3.30.420.40 106 297 2.3E-47 T 01-11-2018 DOE78_21420 4f5f8b15ad877e93244b6e56fd3e092e 297 Gene3D G3DSA:3.30.420.40 2 105 1.5E-23 T 01-11-2018 DOE78_21420 4f5f8b15ad877e93244b6e56fd3e092e 297 Pfam PF00480 ROK family 8 293 6.5E-49 T 01-11-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DOE78_21420 4f5f8b15ad877e93244b6e56fd3e092e 297 SUPERFAMILY SSF53067 3 296 7.69E-58 T 01-11-2018 DOE78_00205 d3b47637d4b04f3de6da58dda600fb08 146 Gene3D G3DSA:1.20.120.490 25 146 9.9E-40 T 01-11-2018 IPR024042 TM1646-like domain superfamily DOE78_00205 d3b47637d4b04f3de6da58dda600fb08 146 Pfam PF03885 Protein of unknown function (DUF327) 10 145 1.4E-38 T 01-11-2018 IPR005585 Protein of unknown function DUF327 DOE78_00205 d3b47637d4b04f3de6da58dda600fb08 146 SUPERFAMILY SSF158397 28 146 3.92E-35 T 01-11-2018 IPR024042 TM1646-like domain superfamily DOE78_22370 8ec4cdea5b77fc80918018f4ee795de4 142 Pfam PF00782 Dual specificity phosphatase, catalytic domain 15 136 2.4E-9 T 01-11-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 DOE78_22370 8ec4cdea5b77fc80918018f4ee795de4 142 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 85 95 - T 01-11-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 DOE78_22370 8ec4cdea5b77fc80918018f4ee795de4 142 SUPERFAMILY SSF52799 24 136 1.84E-14 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like DOE78_22370 8ec4cdea5b77fc80918018f4ee795de4 142 Gene3D G3DSA:3.90.190.10 2 141 4.5E-15 T 01-11-2018 IPR029021 Protein-tyrosine phosphatase-like DOE78_03665 17fda634670517b64c2d673d13c80381 373 Pfam PF03845 Spore germination protein 54 326 4.8E-24 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_01815 90df3081bc35f157571915b7f8c4e58d 608 Pfam PF13520 Amino acid permease 31 444 7.9E-28 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_01815 90df3081bc35f157571915b7f8c4e58d 608 Gene3D G3DSA:1.20.1740.10 46 468 2.5E-21 T 01-11-2018 DOE78_21810 3196aa9f6a3b05c1038f2485b371b516 362 Pfam PF07907 YibE/F-like protein 120 352 2.1E-72 T 01-11-2018 IPR012507 YibE/F-like DOE78_07140 9eb37e12c545b1f35a9a473cfd2b75fe 203 Pfam PF02517 CAAX protease self-immunity 104 194 3.2E-11 T 01-11-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DOE78_05805 8f08fb434ef00a115ad25760ef75a1b1 474 Gene3D G3DSA:3.30.470.20 316 447 1.3E-10 T 01-11-2018 DOE78_05805 8f08fb434ef00a115ad25760ef75a1b1 474 SUPERFAMILY SSF56059 202 424 1.13E-13 T 01-11-2018 DOE78_05805 8f08fb434ef00a115ad25760ef75a1b1 474 Pfam PF14398 YheC/D like ATP-grasp 195 448 1.5E-74 T 01-11-2018 IPR026838 Endospore coat-associated protein YheC/D DOE78_09145 39c1725adea3e1f92cbd4df6ae311378 348 Pfam PF07883 Cupin domain 226 280 9.0E-14 T 01-11-2018 IPR013096 Cupin 2, conserved barrel DOE78_09145 39c1725adea3e1f92cbd4df6ae311378 348 Pfam PF07883 Cupin domain 56 108 3.9E-15 T 01-11-2018 IPR013096 Cupin 2, conserved barrel DOE78_09145 39c1725adea3e1f92cbd4df6ae311378 348 Gene3D G3DSA:2.60.120.10 9 332 4.9E-113 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_09145 39c1725adea3e1f92cbd4df6ae311378 348 Gene3D G3DSA:2.60.120.10 23 192 4.9E-113 T 01-11-2018 IPR014710 RmlC-like jelly roll fold DOE78_09145 39c1725adea3e1f92cbd4df6ae311378 348 SUPERFAMILY SSF51182 8 325 1.45E-45 T 01-11-2018 IPR011051 RmlC-like cupin domain superfamily DOE78_15025 e65f1e085115cd50386f2a53189728db 366 Pfam PF01594 AI-2E family transporter 26 353 7.7E-71 T 01-11-2018 IPR002549 Transmembrane protein TqsA-like DOE78_09850 4465f13ef7ae319f442d1776c8a85d52 316 Pfam PF12679 ABC-2 family transporter protein 5 314 2.2E-13 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DOE78_23470 e3137904e6356b3f05f49515e934bcfb 431 Gene3D G3DSA:3.40.190.10 147 420 4.5E-85 T 01-11-2018 DOE78_23470 e3137904e6356b3f05f49515e934bcfb 431 Gene3D G3DSA:3.40.190.10 61 364 4.5E-85 T 01-11-2018 DOE78_23470 e3137904e6356b3f05f49515e934bcfb 431 Pfam PF13416 Bacterial extracellular solute-binding protein 60 366 2.6E-47 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_23470 e3137904e6356b3f05f49515e934bcfb 431 SUPERFAMILY SSF53850 23 429 1.65E-66 T 01-11-2018 DOE78_11175 11f46550282406868a289a2f48b28027 424 Pfam PF01098 Cell cycle protein 82 418 3.0E-35 T 01-11-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DOE78_03690 ec07aa8585c972ad673667d0b95648c0 132 Pfam PF09858 Predicted membrane protein (DUF2085) 33 117 9.6E-26 T 01-11-2018 IPR019206 Protein of unknown function DUF2085, transmembrane DOE78_14600 c7d65409b12d08d3746a25027d0724e7 44 SUPERFAMILY SSF100985 1 42 1.44E-6 T 01-11-2018 IPR036916 Sporulation inhibitor A superfamily DOE78_14600 c7d65409b12d08d3746a25027d0724e7 44 Pfam PF08970 Sporulation inhibitor A 1 43 1.2E-7 T 01-11-2018 IPR015064 Sporulation inhibitor A DOE78_20290 be46b1bee32a1427cc064215b3e768e0 205 Gene3D G3DSA:3.90.550.10 1 201 1.0E-39 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_20290 be46b1bee32a1427cc064215b3e768e0 205 Pfam PF12804 MobA-like NTP transferase domain 7 174 3.8E-26 T 01-11-2018 IPR025877 MobA-like NTP transferase DOE78_20290 be46b1bee32a1427cc064215b3e768e0 205 SUPERFAMILY SSF53448 5 199 3.15E-19 T 01-11-2018 IPR029044 Nucleotide-diphospho-sugar transferases DOE78_11430 d57c741ee0c1d39996ae2755c600074c 158 Pfam PF11188 Protein of unknown function (DUF2975) 37 158 6.5E-36 T 01-11-2018 IPR021354 Protein of unknown function DUF2975 DOE78_05145 ef4ce6ab9060edc8dbbe71fc1dd6aaf2 326 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 178 4.1E-27 T 01-11-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DOE78_12680 e769c4cf6b27dae6f5268e0b8281afc0 132 Pfam PF07681 DoxX 8 86 8.5E-21 T 01-11-2018 IPR032808 DoxX family DOE78_07775 d10e01e5e714ad83d3f0471001dff152 90 SUPERFAMILY SSF50346 1 75 3.4E-14 T 01-11-2018 IPR011033 PRC-barrel-like superfamily DOE78_07775 d10e01e5e714ad83d3f0471001dff152 90 Pfam PF05239 PRC-barrel domain 2 76 2.9E-13 T 01-11-2018 IPR027275 PRC-barrel domain DOE78_07775 d10e01e5e714ad83d3f0471001dff152 90 Gene3D G3DSA:2.30.30.240 1 76 2.1E-13 T 01-11-2018 DOE78_07775 d10e01e5e714ad83d3f0471001dff152 90 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 74 1.8E-26 T 01-11-2018 IPR014238 Sporulation protein YlmC/YmxH DOE78_20045 e6a5c4ee8116a97b200efd2555381ae9 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 301 8.3E-48 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_04035 5fcaec2247c53fdd0467ff12c8cdbcfb 415 Pfam PF07690 Major Facilitator Superfamily 42 243 1.4E-20 T 01-11-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DOE78_04035 5fcaec2247c53fdd0467ff12c8cdbcfb 415 SUPERFAMILY SSF103473 18 405 2.44E-46 T 01-11-2018 IPR036259 MFS transporter superfamily DOE78_04035 5fcaec2247c53fdd0467ff12c8cdbcfb 415 Gene3D G3DSA:1.20.1250.20 15 405 1.1E-41 T 01-11-2018 DOE78_09540 7db851512fe4335b6196be514b2c1a7a 147 Pfam PF13581 Histidine kinase-like ATPase domain 40 141 2.3E-14 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_09540 7db851512fe4335b6196be514b2c1a7a 147 Gene3D G3DSA:3.30.565.10 20 147 8.9E-12 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_09540 7db851512fe4335b6196be514b2c1a7a 147 SUPERFAMILY SSF55874 43 134 6.81E-10 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_20400 114bf7674781ea882c72a2759ed4a00e 257 SUPERFAMILY SSF53795 113 170 8.93E-7 T 01-11-2018 DOE78_08505 f2e4cb3bb060c4d698148ed135ebab81 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 294 1.9E-41 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_01975 0eceea84e8dab632a33f2c39d403415a 170 Pfam PF07681 DoxX 15 116 1.2E-8 T 01-11-2018 IPR032808 DoxX family DOE78_03035 6c13fa4b3ce55715e5ec98b59aa632a1 198 Gene3D G3DSA:3.40.50.150 25 163 3.4E-15 T 01-11-2018 DOE78_03035 6c13fa4b3ce55715e5ec98b59aa632a1 198 SUPERFAMILY SSF53335 12 195 1.67E-20 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_03035 6c13fa4b3ce55715e5ec98b59aa632a1 198 Pfam PF13679 Methyltransferase domain 42 99 4.9E-8 T 01-11-2018 IPR025714 Methyltransferase domain DOE78_17090 3b6c4be430e67f6435480af5d995c292 81 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 79 1.0E-31 T 01-11-2018 IPR020254 Protein of unknown function DUF2626 DOE78_17090 3b6c4be430e67f6435480af5d995c292 81 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 5.8E-38 T 01-11-2018 IPR020254 Protein of unknown function DUF2626 DOE78_12685 a6bc30c6e6dca34655ad26069804a843 285 Gene3D G3DSA:3.30.2010.10 98 173 8.5E-8 T 01-11-2018 DOE78_12685 a6bc30c6e6dca34655ad26069804a843 285 Pfam PF05569 BlaR1 peptidase M56 57 227 9.3E-16 T 01-11-2018 IPR008756 Peptidase M56 DOE78_21145 39ef4da65e76e1bb9967ff9fc6f11ba3 123 Pfam PF02627 Carboxymuconolactone decarboxylase family 30 111 1.7E-18 T 01-11-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DOE78_21145 39ef4da65e76e1bb9967ff9fc6f11ba3 123 Gene3D G3DSA:1.20.1290.10 6 119 9.5E-29 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DOE78_21145 39ef4da65e76e1bb9967ff9fc6f11ba3 123 SUPERFAMILY SSF69118 12 119 1.31E-26 T 01-11-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 Gene3D G3DSA:1.10.287.130 124 174 1.3E-29 T 01-11-2018 DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 SUPERFAMILY SSF55874 175 323 3.14E-31 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 SMART SM00387 216 326 4.5E-20 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 324 6.5E-18 T 01-11-2018 IPR003594 Histidine kinase/HSP90-like ATPase DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 Gene3D G3DSA:3.30.565.10 175 323 1.3E-29 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 4.4E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 323 4.4E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 4.4E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_02790 7ecad761aca7cc834529a988c3a9fcdd 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 4.4E-10 T 01-11-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DOE78_07595 a04c2b4319262d0e1af53da1d1d4d897 404 Pfam PF07670 Nucleoside recognition 44 143 2.1E-6 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_07595 a04c2b4319262d0e1af53da1d1d4d897 404 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 9 389 5.9E-127 T 01-11-2018 IPR014226 Sporulation integral membrane protein YlbJ DOE78_13640 1491eb021460b7ceb9ddff3c00791102 61 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 3 56 1.4E-15 T 01-11-2018 IPR018690 Protein of unknown function DUF2187 DOE78_04340 fdc20c3d000fe0adff25ed77e80564a3 749 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 11 518 1.2E-152 T 01-11-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 DOE78_04340 fdc20c3d000fe0adff25ed77e80564a3 749 SUPERFAMILY SSF48208 57 367 7.37E-9 T 01-11-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DOE78_06180 78db07963a261a851da80022aee7cc3a 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 3.6E-26 T 01-11-2018 IPR019618 Spore germination protein GerPA/GerPF DOE78_15465 77a05a68ad9a09ab1a21f9b68932d78a 201 Pfam PF04367 Protein of unknown function (DUF502) 56 157 9.6E-26 T 01-11-2018 IPR007462 Protein of unknown function DUF502 DOE78_13715 26caace70ff7e7fc0b5ca289e0acdb8e 149 SMART SM00871 1 148 8.7E-26 T 01-11-2018 IPR010499 Bacterial transcription activator, effector binding DOE78_13715 26caace70ff7e7fc0b5ca289e0acdb8e 149 Pfam PF06445 GyrI-like small molecule binding domain 3 148 1.6E-23 T 01-11-2018 IPR029442 GyrI-like small molecule binding domain DOE78_13715 26caace70ff7e7fc0b5ca289e0acdb8e 149 SUPERFAMILY SSF55136 2 149 1.74E-30 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_13715 26caace70ff7e7fc0b5ca289e0acdb8e 149 Gene3D G3DSA:3.20.80.10 1 149 1.6E-34 T 01-11-2018 IPR011256 Regulatory factor, effector binding domain superfamily DOE78_12450 c1703f7e70217430ac38874749dee64f 439 Gene3D G3DSA:3.40.50.1820 178 439 2.0E-51 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_12450 c1703f7e70217430ac38874749dee64f 439 Gene3D G3DSA:2.60.40.2180 34 172 5.6E-16 T 01-11-2018 DOE78_12450 c1703f7e70217430ac38874749dee64f 439 Pfam PF00326 Prolyl oligopeptidase family 284 327 8.4E-8 T 01-11-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DOE78_12450 c1703f7e70217430ac38874749dee64f 439 SUPERFAMILY SSF53474 188 387 2.39E-24 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_11325 5198b20dd2a36a49299bc99332a3f30d 129 Pfam PF04134 Protein of unknown function, DUF393 5 113 1.4E-33 T 01-11-2018 IPR007263 Protein of unknown function DUF393 DOE78_15400 0ab811936840f40eaae331251bbf7335 148 Pfam PF00072 Response regulator receiver domain 15 123 1.8E-19 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_15400 0ab811936840f40eaae331251bbf7335 148 SUPERFAMILY SSF52172 12 134 3.98E-25 T 01-11-2018 IPR011006 CheY-like superfamily DOE78_15400 0ab811936840f40eaae331251bbf7335 148 Gene3D G3DSA:3.40.50.2300 6 144 4.0E-29 T 01-11-2018 DOE78_15400 0ab811936840f40eaae331251bbf7335 148 SMART SM00448 12 123 9.4E-17 T 01-11-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DOE78_03290 92ec00b6a2b81accff83e0305428a8d0 267 Pfam PF10127 Predicted nucleotidyltransferase 1 259 9.7E-78 T 01-11-2018 IPR018775 Nucleotidyltransferase, predicted DOE78_17310 3e2a58daa6c5781d14881b8b50b42ee3 214 Pfam PF14181 YqfQ-like protein 62 214 8.1E-34 T 01-11-2018 IPR025571 YqfQ-like protein DOE78_18715 c59d8ed53fa9a82c3a3b453533a17639 105 Pfam PF08863 YolD-like protein 14 102 4.7E-20 T 01-11-2018 IPR014962 YolD-like protein DOE78_03510 cbb2e1b60e352929631b99fcc3489c44 74 Pfam PF13314 Domain of unknown function (DUF4083) 16 69 7.6E-14 T 01-11-2018 IPR025143 Protein of unknown function DUF4083 DOE78_18900 1ac9fe669fbb7245ba4390f9b325aea2 314 SUPERFAMILY SSF53335 4 304 1.19E-50 T 01-11-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DOE78_18900 1ac9fe669fbb7245ba4390f9b325aea2 314 Gene3D G3DSA:3.40.50.150 3 176 2.8E-55 T 01-11-2018 DOE78_18900 1ac9fe669fbb7245ba4390f9b325aea2 314 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 6 302 4.7E-39 T 01-11-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DOE78_18900 1ac9fe669fbb7245ba4390f9b325aea2 314 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 68 80 - T 01-11-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 DOE78_18900 1ac9fe669fbb7245ba4390f9b325aea2 314 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 303 3.6E-39 T 01-11-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DOE78_24505 0908b89eafbf0525a9422f7cc719b5cd 476 Pfam PF03606 C4-dicarboxylate anaerobic carrier 26 469 1.4E-108 T 01-11-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DOE78_24375 7a34f11d76134f5cd023ea855a55f883 274 Pfam PF01261 Xylose isomerase-like TIM barrel 29 224 1.0E-23 T 01-11-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DOE78_24375 7a34f11d76134f5cd023ea855a55f883 274 Gene3D G3DSA:3.20.20.150 1 270 2.0E-45 T 01-11-2018 DOE78_24375 7a34f11d76134f5cd023ea855a55f883 274 SUPERFAMILY SSF51658 4 268 1.44E-43 T 01-11-2018 IPR036237 Xylose isomerase-like superfamily DOE78_06515 967cbeefb16701478f19b95b515dad6e 245 Gene3D G3DSA:3.40.50.1820 42 244 2.8E-8 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_06515 967cbeefb16701478f19b95b515dad6e 245 SUPERFAMILY SSF53474 48 242 2.52E-9 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_02620 54dc4c9c6d4fc6ec1522e8ab5420dd74 251 SUPERFAMILY SSF53474 10 247 9.5E-28 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_02620 54dc4c9c6d4fc6ec1522e8ab5420dd74 251 Gene3D G3DSA:3.40.50.1820 4 249 1.7E-35 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_02620 54dc4c9c6d4fc6ec1522e8ab5420dd74 251 Pfam PF00561 alpha/beta hydrolase fold 25 128 1.9E-11 T 01-11-2018 IPR000073 Alpha/beta hydrolase fold-1 DOE78_14085 d048f3e92b70315e64906873a68dc1b9 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 57 322 1.9E-77 T 01-11-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DOE78_14085 d048f3e92b70315e64906873a68dc1b9 339 Gene3D G3DSA:3.40.190.170 40 338 3.8E-100 T 01-11-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DOE78_14085 d048f3e92b70315e64906873a68dc1b9 339 PIRSF PIRSF006470 8 339 7.6E-85 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DOE78_14085 d048f3e92b70315e64906873a68dc1b9 339 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 55 299 1.2E-61 T 01-11-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DOE78_04780 1c065f44713c84c1e5780037586cb338 218 Pfam PF04519 Polymer-forming cytoskeletal 14 85 7.0E-7 T 01-11-2018 IPR007607 Bactofilin A/B DOE78_04625 4460e629a921c51b258869eaf8a4e5a9 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 286 1.7E-35 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_20565 6c1499e03a583f583f75aea1cc51053c 305 SUPERFAMILY SSF53795 116 175 2.84E-13 T 01-11-2018 DOE78_20565 6c1499e03a583f583f75aea1cc51053c 305 Gene3D G3DSA:3.40.50.300 114 182 7.0E-9 T 01-11-2018 DOE78_24460 82da5706ed41f000731151f4cd9686b9 327 Gene3D G3DSA:3.30.565.10 167 325 8.2E-18 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24460 82da5706ed41f000731151f4cd9686b9 327 SUPERFAMILY SSF55874 180 324 1.84E-11 T 01-11-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DOE78_24460 82da5706ed41f000731151f4cd9686b9 327 Pfam PF14501 GHKL domain 215 324 1.1E-10 T 01-11-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain DOE78_09985 80177248dbe869b4e0b3de77f941d084 111 Gene3D G3DSA:3.40.50.2300 1 111 5.4E-28 T 01-11-2018 DOE78_09985 80177248dbe869b4e0b3de77f941d084 111 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 100 7.1E-16 T 01-11-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DOE78_09985 80177248dbe869b4e0b3de77f941d084 111 SUPERFAMILY SSF52794 1 108 3.4E-28 T 01-11-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DOE78_16095 d1e9efbe762514b4444c37fd30740472 272 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 21 231 1.0E-71 T 01-11-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 DOE78_19770 f05ed6b952c7fa81ba8e3e8db2ae163a 233 PRINTS PR01837 MgtC/SapB protein signature 101 125 1.5E-36 T 01-11-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DOE78_19770 f05ed6b952c7fa81ba8e3e8db2ae163a 233 PRINTS PR01837 MgtC/SapB protein signature 73 95 1.5E-36 T 01-11-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DOE78_19770 f05ed6b952c7fa81ba8e3e8db2ae163a 233 PRINTS PR01837 MgtC/SapB protein signature 20 39 1.5E-36 T 01-11-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DOE78_19770 f05ed6b952c7fa81ba8e3e8db2ae163a 233 PRINTS PR01837 MgtC/SapB protein signature 39 57 1.5E-36 T 01-11-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DOE78_19770 f05ed6b952c7fa81ba8e3e8db2ae163a 233 Pfam PF02308 MgtC family 17 141 1.9E-28 T 01-11-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DOE78_01640 6b364dbf3473f45814fbf62a445b3758 393 Pfam PF14199 Domain of unknown function (DUF4317) 1 380 6.4E-106 T 01-11-2018 IPR025466 Protein of unknown function DUF4317 DOE78_18440 e125a84795e971ab513ff93bd8d87a98 158 SUPERFAMILY SSF54637 9 144 5.92E-21 T 01-11-2018 IPR029069 HotDog domain superfamily DOE78_18440 e125a84795e971ab513ff93bd8d87a98 158 Gene3D G3DSA:3.10.129.10 10 151 1.1E-24 T 01-11-2018 DOE78_18440 e125a84795e971ab513ff93bd8d87a98 158 Pfam PF01575 MaoC like domain 22 125 3.6E-9 T 01-11-2018 IPR002539 MaoC-like dehydratase domain DOE78_22350 032463eb968e2fc8846dbe83b758d0a7 460 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 17 457 1.8E-120 T 01-11-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 DOE78_22350 032463eb968e2fc8846dbe83b758d0a7 460 Pfam PF03553 Na+/H+ antiporter family 161 453 3.6E-52 T 01-11-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DOE78_19010 e8ed1217f01aed45bce9e5f0f0dea84c 163 Gene3D G3DSA:3.30.420.10 1 160 1.7E-33 T 01-11-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DOE78_19010 e8ed1217f01aed45bce9e5f0f0dea84c 163 SUPERFAMILY SSF53098 1 155 9.86E-16 T 01-11-2018 IPR012337 Ribonuclease H-like superfamily DOE78_19010 e8ed1217f01aed45bce9e5f0f0dea84c 163 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 11 152 3.1E-9 T 01-11-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DOE78_14815 2c30c1b591caa4b47c38d1c892839dd0 148 Pfam PF10710 Protein of unknown function (DUF2512) 4 141 1.0E-37 T 01-11-2018 IPR019649 Protein of unknown function DUF2512 DOE78_02945 5a2699e18b107741720110ec04b1ca9a 221 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 81 204 4.6E-8 T 01-11-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain DOE78_17945 6ae290b12308b929186d44c99b18551b 288 Pfam PF02163 Peptidase family M50 33 104 1.1E-7 T 01-11-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DOE78_01820 0a84cb376dca641c5b48d39caaf125d5 66 Pfam PF14044 NETI protein 9 62 1.9E-27 T 01-11-2018 IPR025930 NETI protein DOE78_06455 374223ded1dcda44f9abe0ae2ec23a89 240 Pfam PF14256 YwiC-like protein 5 128 1.3E-38 T 01-11-2018 IPR025576 YwiC-like protein DOE78_16155 9d97ebbf0fba3cae66328e7380c6f1c0 47 Pfam PF14140 YpzI-like protein 1 41 1.5E-21 T 01-11-2018 IPR025414 YpzI-like protein DOE78_08475 6af682cf04da3f05ae3d6a8ae1fc0ff7 70 Pfam PF14035 YlzJ-like protein 3 67 4.6E-21 T 01-11-2018 IPR025619 YlzJ-like protein DOE78_16590 aa261ba355d79209e6bdc9231dc473f6 303 Pfam PF00892 EamA-like transporter family 148 286 5.3E-20 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_16590 aa261ba355d79209e6bdc9231dc473f6 303 Pfam PF00892 EamA-like transporter family 2 134 2.7E-16 T 01-11-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DOE78_16590 aa261ba355d79209e6bdc9231dc473f6 303 SUPERFAMILY SSF103481 189 288 1.7E-13 T 01-11-2018 DOE78_16590 aa261ba355d79209e6bdc9231dc473f6 303 SUPERFAMILY SSF103481 36 137 2.75E-15 T 01-11-2018 DOE78_07645 398cf6efeaffaa1015fd65862778b96e 70 SUPERFAMILY SSF51230 3 70 4.19E-21 T 01-11-2018 IPR011053 Single hybrid motif DOE78_07645 398cf6efeaffaa1015fd65862778b96e 70 Pfam PF00364 Biotin-requiring enzyme 3 69 1.8E-19 T 01-11-2018 IPR000089 Biotin/lipoyl attachment DOE78_07645 398cf6efeaffaa1015fd65862778b96e 70 Gene3D G3DSA:2.40.50.100 3 70 4.3E-25 T 01-11-2018 DOE78_08200 5e84223268989ec0cbb929cf7dd0b6a8 211 Pfam PF13861 FlgD Tudor-like domain 156 207 3.2E-6 T 01-11-2018 IPR025963 FlgD Tudor-like domain DOE78_08200 5e84223268989ec0cbb929cf7dd0b6a8 211 Pfam PF03963 Flagellar hook capping protein - N-terminal region 12 75 3.7E-21 T 01-11-2018 IPR005648 Flagellar hook capping protein DOE78_07450 763f51b7fac1b60129111ab1532f5d08 165 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 4 164 7.0E-46 T 01-11-2018 IPR020229 Uncharacterised protein YlaL DOE78_11050 b92814c3fb37feb3133f5902746cb41d 234 Pfam PF14329 Domain of unknown function (DUF4386) 10 220 3.7E-48 T 01-11-2018 IPR025495 Protein of unknown function DUF4386 DOE78_10260 f039d0c961340082c9f4d3522374c6bd 486 SUPERFAMILY SSF50998 237 399 9.02E-6 T 01-11-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DOE78_10260 f039d0c961340082c9f4d3522374c6bd 486 Pfam PF05935 Arylsulfotransferase (ASST) 103 386 1.6E-22 T 01-11-2018 IPR010262 Arylsulfotransferase, bacteria GO:0004062 DOE78_09970 9f5e7e79c0d43bf5aa08d0e2518e7a50 158 Gene3D G3DSA:3.40.630.30 11 157 1.6E-17 T 01-11-2018 DOE78_09970 9f5e7e79c0d43bf5aa08d0e2518e7a50 158 SUPERFAMILY SSF55729 39 155 1.62E-17 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09970 9f5e7e79c0d43bf5aa08d0e2518e7a50 158 Pfam PF00583 Acetyltransferase (GNAT) family 43 137 1.6E-6 T 01-11-2018 IPR000182 GNAT domain DOE78_16395 6ec19cb6f3934a93897440abb15cf7c7 493 PIRSF PIRSF005690 11 493 2.8E-129 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_16395 6ec19cb6f3934a93897440abb15cf7c7 493 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 27 478 7.7E-146 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_13075 91a0fe5f2b9874070aa56b521641cbd4 323 SUPERFAMILY SSF53474 7 310 3.51E-39 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_13075 91a0fe5f2b9874070aa56b521641cbd4 323 Pfam PF12146 Serine aminopeptidase, S33 54 272 6.8E-20 T 01-11-2018 IPR022742 Serine aminopeptidase, S33 DOE78_09340 c4ba492e4732974e7fbb972f7a1397f9 344 Gene3D G3DSA:1.20.1260.10 184 328 1.1E-6 T 01-11-2018 IPR012347 Ferritin-like DOE78_09340 c4ba492e4732974e7fbb972f7a1397f9 344 Gene3D G3DSA:1.20.1260.10 11 159 7.2E-11 T 01-11-2018 IPR012347 Ferritin-like DOE78_09340 c4ba492e4732974e7fbb972f7a1397f9 344 Pfam PF11553 Protein of unknown function (DUF3231) 181 341 7.2E-39 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_09340 c4ba492e4732974e7fbb972f7a1397f9 344 Pfam PF11553 Protein of unknown function (DUF3231) 11 172 6.8E-49 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_20085 b4a2bd4548cc9d768b05a332534b9613 292 SUPERFAMILY SSF161098 52 279 2.49E-57 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_20085 b4a2bd4548cc9d768b05a332534b9613 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 281 4.7E-17 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_20085 b4a2bd4548cc9d768b05a332534b9613 292 Gene3D G3DSA:1.10.3720.10 48 289 4.0E-67 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04935 f87ea8e48d7daef93a61b6c6114729bb 300 Pfam PF03547 Membrane transport protein 13 137 9.3E-8 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DOE78_04935 f87ea8e48d7daef93a61b6c6114729bb 300 Pfam PF03547 Membrane transport protein 152 295 1.0E-19 T 01-11-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DOE78_04255 222de4cf1dae68c70bb5e58793c8d8c4 486 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 22 471 3.8E-136 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_04255 222de4cf1dae68c70bb5e58793c8d8c4 486 PIRSF PIRSF005690 6 485 2.8E-137 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_23365 6126165efbc03d5c311f43fcc827badf 218 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 10 197 1.3E-59 T 01-11-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein DOE78_20670 05dc9fadbf31af8987a316bcb49fbbdb 363 SUPERFAMILY SSF48371 36 235 3.1E-47 T 01-11-2018 IPR016024 Armadillo-type fold DOE78_20670 05dc9fadbf31af8987a316bcb49fbbdb 363 Pfam PF08713 DNA alkylation repair enzyme 120 231 4.8E-6 T 01-11-2018 IPR014825 DNA alkylation repair enzyme DOE78_20670 05dc9fadbf31af8987a316bcb49fbbdb 363 Gene3D G3DSA:1.25.40.290 118 235 1.1E-40 T 01-11-2018 DOE78_07550 e643d94165f42ac4d8fb2792f668fbe2 143 Pfam PF14071 Putative coat protein 11 143 1.0E-34 T 01-11-2018 IPR025953 Putative coat protein YlbD DOE78_24275 e1b1644a0cebdc7012b6dd0f03ce212e 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.2E-7 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_24275 e1b1644a0cebdc7012b6dd0f03ce212e 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 23 9.5E-5 T 01-11-2018 IPR012902 Prokaryotic N-terminal methylation site DOE78_11160 46e9c9c31471fe344ac237e729677ddc 403 Pfam PF12704 MacB-like periplasmic core domain 21 238 9.9E-30 T 01-11-2018 IPR025857 MacB-like periplasmic core domain DOE78_11160 46e9c9c31471fe344ac237e729677ddc 403 Pfam PF02687 FtsX-like permease family 309 396 1.3E-10 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_20855 e7d5cdcd29436b238cee4de2bd8d08e0 140 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 4.0E-33 T 01-11-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein DOE78_24305 438f16defaaaf07c0a9677884584558b 675 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 96 371 6.9E-85 T 01-11-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 DOE78_24305 438f16defaaaf07c0a9677884584558b 675 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 364 440 3.7E-10 T 01-11-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 DOE78_04770 e560923d80bffd13fa37269d53ffd919 237 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 143 231 1.3E-6 T 01-11-2018 IPR018745 Domain of unknown function DUF2294 DOE78_04770 e560923d80bffd13fa37269d53ffd919 237 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 11 113 3.1E-13 T 01-11-2018 IPR018745 Domain of unknown function DUF2294 DOE78_16870 496da57b1a72d87d962c8f23f7c59726 135 Pfam PF03780 Asp23 family, cell envelope-related function 17 121 1.4E-36 T 01-11-2018 IPR005531 Alkaline shock protein Asp23 DOE78_01520 16a207530ea3569fa0a487644425879e 245 Pfam PF02517 CAAX protease self-immunity 127 213 5.2E-17 T 01-11-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DOE78_22765 b7a71d4dda362ddbe4edfe881f4ddad4 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 1.8E-51 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_21835 d9e76744d5f9ee85e255a3304439af81 507 Gene3D G3DSA:2.50.20.10 212 336 2.4E-9 T 01-11-2018 DOE78_21835 d9e76744d5f9ee85e255a3304439af81 507 Pfam PF03888 MucB/RseB N-terminal domain 288 335 1.2E-5 T 01-11-2018 IPR033434 MucB/RseB, N-terminal DOE78_09005 ef17f301bb4626a1ba610856ef17ea56 345 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 307 8.2E-43 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_03125 e3a3bb5a347603ba208be15521a2c419 218 SUPERFAMILY SSF161098 13 201 4.19E-51 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_03125 e3a3bb5a347603ba208be15521a2c419 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 1.0E-26 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_03125 e3a3bb5a347603ba208be15521a2c419 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 1.1E-26 T 01-11-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DOE78_03125 e3a3bb5a347603ba208be15521a2c419 218 Gene3D G3DSA:1.10.3720.10 1 217 4.6E-64 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_04630 0f42cb81175405f5e1d5a42072269285 222 SUPERFAMILY SSF56524 9 206 5.49E-62 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DOE78_04630 0f42cb81175405f5e1d5a42072269285 222 Gene3D G3DSA:3.90.420.10 32 212 1.6E-47 T 01-11-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DOE78_04630 0f42cb81175405f5e1d5a42072269285 222 Pfam PF00174 Oxidoreductase molybdopterin binding domain 41 187 1.2E-39 T 01-11-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DOE78_16340 3e96cf1805278193dac67206c948cad1 177 Pfam PF07670 Nucleoside recognition 47 146 3.7E-8 T 01-11-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DOE78_06750 3c3156647cb9a854c90c8e6473dae1f9 84 Pfam PF14069 Stage VI sporulation protein F 6 77 1.0E-28 T 01-11-2018 IPR025942 Stage VI sporulation protein F DOE78_22935 87809fc743210197f91b6a3a7552f220 140 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 3 137 6.2E-47 T 01-11-2018 IPR022258 Flagellar operon protein YvyF DOE78_03870 a9c684667d2d96a43984916b4a2b64dd 302 Pfam PF08378 Nuclease-related domain 37 144 3.4E-15 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_20865 f8ed3a82af3d551efb723bbbc4809a8d 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.4E-17 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_20865 f8ed3a82af3d551efb723bbbc4809a8d 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 2.4E-17 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_20865 f8ed3a82af3d551efb723bbbc4809a8d 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.4E-17 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_20865 f8ed3a82af3d551efb723bbbc4809a8d 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 2.4E-17 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_20865 f8ed3a82af3d551efb723bbbc4809a8d 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 2.4E-17 T 01-11-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_20865 f8ed3a82af3d551efb723bbbc4809a8d 493 Pfam PF00361 Proton-conducting membrane transporter 128 415 5.5E-51 T 01-11-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DOE78_04315 2ea537794172bf8fa47d858d75eca0eb 440 SUPERFAMILY SSF53850 13 437 2.56E-79 T 01-11-2018 DOE78_04315 2ea537794172bf8fa47d858d75eca0eb 440 Gene3D G3DSA:3.40.190.10 22 439 7.9E-90 T 01-11-2018 DOE78_04315 2ea537794172bf8fa47d858d75eca0eb 440 Pfam PF01547 Bacterial extracellular solute-binding protein 37 337 1.3E-37 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_03190 9714cf4f2b9de5a2db5c7821ab6238e5 199 Pfam PF08006 Protein of unknown function (DUF1700) 15 195 8.3E-49 T 01-11-2018 IPR012963 Protein of unknown function DUF1700 DOE78_21330 f431beb6bc391262c1a3e07bf0acf5f3 146 SUPERFAMILY SSF52540 2 146 4.78E-12 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_21330 f431beb6bc391262c1a3e07bf0acf5f3 146 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 41 144 2.3E-9 T 01-11-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DOE78_21330 f431beb6bc391262c1a3e07bf0acf5f3 146 Gene3D G3DSA:3.40.50.300 16 146 9.1E-9 T 01-11-2018 DOE78_22990 2bafa0f416c72cfb469f523340ca2d86 485 Pfam PF04932 O-Antigen ligase 261 409 1.0E-14 T 01-11-2018 IPR007016 O-antigen ligase-related DOE78_14770 b4f7fabe6007b9ba4e7ff2c1ec049a74 198 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 9 182 6.0E-62 T 01-11-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 DOE78_14770 b4f7fabe6007b9ba4e7ff2c1ec049a74 198 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 185 1.1E-57 T 01-11-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 DOE78_14770 b4f7fabe6007b9ba4e7ff2c1ec049a74 198 Gene3D G3DSA:1.10.1760.20 3 186 9.5E-54 T 01-11-2018 DOE78_14580 1ae311f35e04dac52b2022f7559362a0 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 117 8.1E-23 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DOE78_14580 1ae311f35e04dac52b2022f7559362a0 128 TIGRFAM TIGR00494 crcB: protein CrcB 4 118 3.7E-24 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DOE78_14580 1ae311f35e04dac52b2022f7559362a0 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 122 17.541 T 01-11-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DOE78_11345 1ec7a3613ddaf3040aa36111aaef09ea 902 Pfam PF12705 PD-(D/E)XK nuclease superfamily 623 895 5.2E-19 T 01-11-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DOE78_23360 bb1117d1239932d37bff355d087bf73c 399 Pfam PF05816 Toxic anion resistance protein (TelA) 65 392 1.7E-126 T 01-11-2018 IPR008863 Toxic anion resistance DOE78_23360 bb1117d1239932d37bff355d087bf73c 399 PIRSF PIRSF026508 30 397 1.2E-121 T 01-11-2018 IPR008863 Toxic anion resistance DOE78_05565 0e74519574bdf3db69369b882465b024 470 Pfam PF04293 SpoVR like protein 4 409 6.8E-164 T 01-11-2018 IPR007390 Sporulation stage V, protein R DOE78_15140 325e7ce33394ff20ca50fe0835468153 468 Gene3D G3DSA:1.20.1740.10 14 464 3.3E-54 T 01-11-2018 DOE78_15140 325e7ce33394ff20ca50fe0835468153 468 PIRSF PIRSF006060 5 463 3.4E-59 T 01-11-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DOE78_15140 325e7ce33394ff20ca50fe0835468153 468 Pfam PF00324 Amino acid permease 25 387 8.3E-62 T 01-11-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DOE78_06530 5037748bcbd7da139aba16506e56d85a 62 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 3 57 4.0E-17 T 01-11-2018 IPR024558 ComZ DOE78_06530 5037748bcbd7da139aba16506e56d85a 62 Pfam PF10815 ComZ 4 58 1.1E-30 T 01-11-2018 IPR024558 ComZ DOE78_01305 ca89ad4f0b1793e25905ab6ef10d3e80 158 Pfam PF03703 Bacterial PH domain 71 147 1.6E-16 T 01-11-2018 IPR005182 Domain of unknown function DUF304 DOE78_08925 16bd1b9775be0f77684a3e9feed38312 431 Pfam PF13416 Bacterial extracellular solute-binding protein 56 353 7.7E-24 T 01-11-2018 IPR006059 Bacterial extracellular solute-binding protein DOE78_08925 16bd1b9775be0f77684a3e9feed38312 431 Gene3D G3DSA:3.40.190.10 149 423 8.9E-132 T 01-11-2018 DOE78_08925 16bd1b9775be0f77684a3e9feed38312 431 Gene3D G3DSA:3.40.190.10 39 374 8.9E-132 T 01-11-2018 DOE78_08925 16bd1b9775be0f77684a3e9feed38312 431 SUPERFAMILY SSF53850 35 427 8.89E-51 T 01-11-2018 DOE78_04775 6bce2f63d2e7d4cdb8462de24951e256 210 Pfam PF13171 Protein of unknown function (DUF4004) 4 198 2.0E-73 T 01-11-2018 IPR025063 Protein of unknown function DUF4004 DOE78_17845 ed7ee1fc0024dddfad379914569a3e9c 68 Pfam PF11146 Protein of unknown function (DUF2905) 6 64 3.1E-22 T 01-11-2018 IPR021320 Protein of unknown function DUF2905 DOE78_21230 1c1aeb6698cd807991802415e3db6d6f 279 Pfam PF06276 Ferric iron reductase FhuF-like transporter 77 229 4.4E-12 T 01-11-2018 IPR022770 Ferric iron reductase FhuF domain DOE78_19135 689c7661fe1f4d3cc5cdbed5eb945cfa 124 Pfam PF07852 Protein of unknown function (DUF1642) 6 92 2.5E-7 T 01-11-2018 IPR012865 Protein of unknown function DUF1642 DOE78_07295 6a2efc577d902704438ad013d33d6c0f 151 Pfam PF00578 AhpC/TSA family 7 125 1.2E-14 T 01-11-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DOE78_07295 6a2efc577d902704438ad013d33d6c0f 151 Gene3D G3DSA:3.40.30.10 1 148 1.6E-39 T 01-11-2018 DOE78_07295 6a2efc577d902704438ad013d33d6c0f 151 SUPERFAMILY SSF52833 2 141 8.12E-34 T 01-11-2018 IPR036249 Thioredoxin-like superfamily DOE78_02065 86a7d95e8dea8417c7c7a1f41fbfc0d7 185 Pfam PF11667 Putative zincin peptidase 56 157 3.6E-18 T 01-11-2018 IPR021683 Putative zincin peptidase DOE78_15880 7e4d7879472d0c7bdb011c9c2a1934d5 314 Pfam PF10720 Protein of unknown function (DUF2515) 2 302 2.5E-119 T 01-11-2018 IPR019658 Protein of unknown function DUF2515 DOE78_20500 346b12b6e9df1c774a6f8709561a7486 364 SUPERFAMILY SSF53756 3 360 1.66E-48 T 01-11-2018 DOE78_20500 346b12b6e9df1c774a6f8709561a7486 364 Pfam PF13439 Glycosyltransferase Family 4 4 166 6.3E-11 T 01-11-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DOE78_20500 346b12b6e9df1c774a6f8709561a7486 364 Gene3D G3DSA:3.40.50.2000 164 325 1.7E-48 T 01-11-2018 DOE78_20500 346b12b6e9df1c774a6f8709561a7486 364 Gene3D G3DSA:3.40.50.2000 4 163 1.7E-48 T 01-11-2018 DOE78_20500 346b12b6e9df1c774a6f8709561a7486 364 Pfam PF00534 Glycosyl transferases group 1 188 326 2.0E-24 T 01-11-2018 IPR001296 Glycosyl transferase, family 1 DOE78_17360 898b261bd165fab3fe9b7b3aa2970e5c 269 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 5 267 61.49 T 01-11-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein DOE78_17360 898b261bd165fab3fe9b7b3aa2970e5c 269 Pfam PF03618 Kinase/pyrophosphorylase 7 262 1.4E-99 T 01-11-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DOE78_02290 15dde682064222b18e4e661d8191e30e 203 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 11 195 3.4E-54 T 01-11-2018 IPR018672 Protein of unknown function DUF2140 DOE78_05905 8cddbaf26502fa5d2844ec77dc08ccf8 118 Pfam PF12732 YtxH-like protein 7 73 9.5E-10 T 01-11-2018 IPR024623 Uncharacterised protein family YtxH DOE78_09515 9da17c7ff41d245577ba629d21c065f5 128 Pfam PF13673 Acetyltransferase (GNAT) domain 22 125 2.8E-13 T 01-11-2018 IPR000182 GNAT domain DOE78_09515 9da17c7ff41d245577ba629d21c065f5 128 SUPERFAMILY SSF55729 13 109 5.66E-19 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_09515 9da17c7ff41d245577ba629d21c065f5 128 Gene3D G3DSA:3.40.630.30 7 122 5.1E-19 T 01-11-2018 DOE78_10280 394ff82461ef2dddc014468b02fdaea9 54 Pfam PF13076 Fur-regulated basic protein A 12 47 2.8E-14 T 01-11-2018 IPR025072 Fur-regulated basic protein A DOE78_16800 0ea4054a194c708b1281c2d655dcd7b9 524 Pfam PF03961 Flagellar Assembly Protein A 71 518 5.6E-97 T 01-11-2018 IPR005646 Flagellar assembly protein A DOE78_18510 c7a8d4a182999d5ba82cc5d79005195a 110 Pfam PF14034 Sporulation protein YtrH 10 107 1.3E-37 T 01-11-2018 IPR025689 Sporulation protein YtrH DOE78_16485 b1928d5ef2a3e286337837729bffaf69 44 Pfam PF13072 Protein of unknown function (DUF3936) 1 37 3.6E-20 T 01-11-2018 IPR025177 Cell division inhibitor MciZ DOE78_05260 356d32238f71b8eaccfe53777fd9fae4 120 Hamap MF_01502 UPF0295 protein . 1 115 36.142 T 01-11-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 DOE78_05260 356d32238f71b8eaccfe53777fd9fae4 120 Pfam PF11023 Zinc-ribbon containing domain 3 113 1.2E-60 T 01-11-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 DOE78_05260 356d32238f71b8eaccfe53777fd9fae4 120 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 1 113 1.0E-39 T 01-11-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 DOE78_09405 c57a00a18e3ef4b2d8688ef0df31f033 409 Gene3D G3DSA:2.120.10.30 180 396 2.8E-8 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_09405 c57a00a18e3ef4b2d8688ef0df31f033 409 Gene3D G3DSA:2.120.10.30 19 157 1.6E-8 T 01-11-2018 IPR011042 Six-bladed beta-propeller, TolB-like DOE78_09405 c57a00a18e3ef4b2d8688ef0df31f033 409 SUPERFAMILY SSF82171 41 347 2.49E-22 T 01-11-2018 DOE78_20320 1c59cb0289a539c559d34a797ed19a60 278 Pfam PF12679 ABC-2 family transporter protein 9 237 5.1E-11 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DOE78_09905 410024906b0bc3ddbede9df5e3f846a3 183 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 109 161 8.2E-8 T 01-11-2018 IPR019264 Domain of unknown function DUF2179 DOE78_09905 410024906b0bc3ddbede9df5e3f846a3 183 Hamap MF_01515 UPF0316 protein . 1 169 28.378 T 01-11-2018 IPR022930 Protein of unknown function UPF0316 DOE78_20860 d0019aa53a528923f2cd2f21c6519d92 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 4.4E-30 T 01-11-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DOE78_06745 a53ea5b20d70513cccd80190f89d2201 40 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 14 39 7.0E-15 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_06745 a53ea5b20d70513cccd80190f89d2201 40 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 16 39 2.2E-12 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_21640 95a7cd0c85cacaf61b8a8c214353346f 95 Pfam PF11256 Protein of unknown function (DUF3055) 6 83 4.2E-17 T 01-11-2018 IPR021415 Protein of unknown function DUF3055 DOE78_01100 a537b663b601bc770684f5a1a54dc6a2 502 PIRSF PIRSF005690 18 502 3.0E-185 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_01100 a537b663b601bc770684f5a1a54dc6a2 502 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 33 490 2.7E-193 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_06070 ed8497bc932818f570d90e26dadaa85b 231 Pfam PF07875 Coat F domain 127 189 8.2E-17 T 01-11-2018 IPR012851 Spore coat protein CotF-like DOE78_07500 0a9d043bdab8b51eff5dc94bedab1380 301 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 27 280 2.5E-60 T 01-11-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related DOE78_07500 0a9d043bdab8b51eff5dc94bedab1380 301 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 3 282 1.3E-128 T 01-11-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG DOE78_24675 069e5f5ed2d69990df33ff62a564c3cb 238 Pfam PF04474 Protein of unknown function (DUF554) 4 227 1.1E-72 T 01-11-2018 IPR007563 Protein of unknown function DUF554 DOE78_19430 15c7f0299f047638f9ce26ad7b605d05 87 Pfam PF10732 Protein of unknown function (DUF2524) 1 84 1.6E-28 T 01-11-2018 IPR019668 Uncharacterised protein family YtzC DOE78_03310 d8394d6d6a0ed1f777c890a6b177a5ba 344 Pfam PF02687 FtsX-like permease family 252 325 9.3E-8 T 01-11-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DOE78_10105 d4b6756fe6b17de371389cf71137d304 69 Gene3D G3DSA:1.10.150.240 1 64 1.4E-15 T 01-11-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DOE78_23180 7220146868a9464a740bdd24eb46d935 179 Pfam PF06338 ComK protein 6 148 2.6E-33 T 01-11-2018 IPR010461 Competence protein ComK GO:0030420 DOE78_11780 36b98dde207ee9de430c169c51bdc0ed 371 Pfam PF02625 XdhC and CoxI family 17 78 1.9E-17 T 01-11-2018 IPR003777 XdhC- CoxI DOE78_11780 36b98dde207ee9de430c169c51bdc0ed 371 Pfam PF13478 XdhC Rossmann domain 201 341 6.5E-37 T 01-11-2018 IPR027051 XdhC Rossmann domain DOE78_11780 36b98dde207ee9de430c169c51bdc0ed 371 Gene3D G3DSA:3.40.50.720 200 358 1.8E-49 T 01-11-2018 DOE78_13095 1be459d1523efb2de8cdf47383901e9c 177 SUPERFAMILY SSF81301 6 168 4.58E-47 T 01-11-2018 DOE78_13095 1be459d1523efb2de8cdf47383901e9c 177 Pfam PF04229 GrpB protein 5 161 3.7E-45 T 01-11-2018 IPR007344 GrpB/Dephospho-CoA kinase DOE78_13095 1be459d1523efb2de8cdf47383901e9c 177 Gene3D G3DSA:3.30.460.10 1 170 1.7E-50 T 01-11-2018 DOE78_12475 150b58dc3df073946c77bb24f3e09001 141 SUPERFAMILY SSF47661 51 114 3.81E-5 T 01-11-2018 IPR010989 SNARE GO:0016020|GO:0016192 DOE78_07090 f268b912087a83e6c7c15285913c1bea 173 Pfam PF01814 Hemerythrin HHE cation binding domain 20 155 4.0E-16 T 01-11-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DOE78_07090 f268b912087a83e6c7c15285913c1bea 173 Gene3D G3DSA:1.20.120.520 12 173 3.5E-31 T 01-11-2018 DOE78_20425 ec34174de0d071992c1a2ab01b0d9e4c 352 Pfam PF01757 Acyltransferase family 5 322 9.8E-21 T 01-11-2018 IPR002656 Acyltransferase 3 GO:0016747 DOE78_23305 927baaff98123620b7fd60818676364c 245 Gene3D G3DSA:3.40.50.300 190 243 7.9E-6 T 01-11-2018 DOE78_23305 927baaff98123620b7fd60818676364c 245 Pfam PF02706 Chain length determinant protein 3 94 7.4E-21 T 01-11-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DOE78_23305 927baaff98123620b7fd60818676364c 245 Pfam PF13807 G-rich domain on putative tyrosine kinase 142 194 1.7E-8 T 01-11-2018 IPR032807 Tyrosine kinase, G-rich domain DOE78_05400 28ff380a0e23671a7b233abf13718c1e 289 Pfam PF12671 Putative amidase domain 129 282 2.8E-40 T 01-11-2018 IPR024301 Putative amidase domain DOE78_19075 e1a2ae2e27d73031829dd6cdcb43e28d 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 65 8.1E-6 T 01-11-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DOE78_20350 afc9d85bd25d0e4746a1f10dd0f58e1e 332 SUPERFAMILY SSF110296 90 326 1.96E-25 T 01-11-2018 DOE78_20350 afc9d85bd25d0e4746a1f10dd0f58e1e 332 Gene3D G3DSA:2.130.10.10 98 331 7.8E-18 T 01-11-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DOE78_24335 16aad358a22d8c1a0a2c1c5099ab105b 229 Pfam PF09359 VTC domain 9 225 1.4E-22 T 01-11-2018 IPR018966 VTC domain DOE78_06405 c1cbe0fc16fce83d52434f4d88eab849 59 Pfam PF12758 Protein of unknown function (DUF3813) 1 58 2.3E-24 T 01-11-2018 IPR024217 Protein of unknown function DUF3813 DOE78_09460 85110fd14abfc362fc32e7e066c9c201 115 Pfam PF05656 Protein of unknown function (DUF805) 11 112 2.0E-37 T 01-11-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 DOE78_06790 04828231aa719041f1d84dffa0de9410 651 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 35 640 1.5E-232 T 01-11-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DOE78_06790 04828231aa719041f1d84dffa0de9410 651 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 568 6.4E-98 T 01-11-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DOE78_10215 6cd3538841e09a31dc89bd29f56358e6 101 Gene3D G3DSA:3.30.70.1480 1 101 1.3E-34 T 01-11-2018 IPR028990 GK1464-like DOE78_10215 6cd3538841e09a31dc89bd29f56358e6 101 SUPERFAMILY SSF143579 2 100 3.4E-31 T 01-11-2018 IPR028990 GK1464-like DOE78_01720 2937abe880a8aea340cd347a163aae49 128 Pfam PF07811 TadE-like protein 14 56 2.5E-8 T 01-11-2018 IPR012495 TadE-like DOE78_12055 c6495e0b47a156c4f940d7e0b9177920 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 285 1.2E-18 T 01-11-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DOE78_12055 c6495e0b47a156c4f940d7e0b9177920 294 Gene3D G3DSA:1.10.3720.10 53 291 1.4E-68 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_12055 c6495e0b47a156c4f940d7e0b9177920 294 SUPERFAMILY SSF161098 57 284 1.96E-62 T 01-11-2018 IPR035906 MetI-like superfamily DOE78_15745 857379508188588171b3dbd4034591dd 47 TIGRFAM TIGR03093 SASP_sspL: small, acid-soluble spore protein L 10 46 3.6E-20 T 01-11-2018 IPR017526 Small acid-soluble spore protein, SspL DOE78_01980 8f62e2727d3bec36116a18589717102d 170 Pfam PF07681 DoxX 15 116 1.5E-8 T 01-11-2018 IPR032808 DoxX family DOE78_08345 e47525e4b8d8a80d6e43777bf99b814d 263 Pfam PF01148 Cytidylyltransferase family 2 261 4.3E-75 T 01-11-2018 DOE78_18725 c332a2e3e8f7575cab4241011529332c 791 SUPERFAMILY SSF52540 402 730 2.31E-7 T 01-11-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DOE78_08945 c1430200a7bfd44c60c2e007dd4fc266 212 Pfam PF04854 Protein of unknown function, DUF624 20 96 9.9E-31 T 01-11-2018 IPR006938 Protein of unknown function DUF624 DOE78_20560 2e96e7ea0d32cbf80596bb7a4ae217bc 96 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 27 93 1.8E-14 T 01-11-2018 IPR008792 Coenzyme PQQ synthesis D DOE78_02015 4485691e15a7a7b42b06026aa4324df7 122 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 2 111 7.1E-39 T 01-11-2018 IPR018745 Domain of unknown function DUF2294 DOE78_05875 8909e8e7864f85272a08185115aa3dbc 25 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 3 25 8.3E-15 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_05875 8909e8e7864f85272a08185115aa3dbc 25 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 3 25 7.2E-14 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_06050 bfc5b4921f30af0fe0146910f55f3ed3 44 Pfam PF14149 YhfH-like protein 3 38 7.0E-21 T 01-11-2018 IPR025432 YhfH-like protein DOE78_20925 45ccd5dc0226812c87f56667daeb1650 203 Pfam PF09335 SNARE associated Golgi protein 30 160 5.9E-22 T 01-11-2018 IPR032816 SNARE associated Golgi protein DOE78_24445 6890358fddb063dd1b116c102d025194 385 Pfam PF12679 ABC-2 family transporter protein 3 382 5.2E-36 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DOE78_14405 07d8531dc425122cf6ae508cb4a42bfe 332 Pfam PF01384 Phosphate transporter family 22 321 1.3E-89 T 01-11-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DOE78_23235 026b05cc5754d5272fcac29a313bac48 270 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 63 232 6.3E-56 T 01-11-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 DOE78_23235 026b05cc5754d5272fcac29a313bac48 270 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 59 236 4.9E-51 T 01-11-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 DOE78_16025 e857b9cabf19f72bb23bb3746c076e62 154 Pfam PF10673 Protein of unknown function (DUF2487) 9 150 2.3E-50 T 01-11-2018 IPR019615 Protein of unknown function DUF2487 DOE78_23510 562041b055aa8440e0f92ecd0d714f22 141 Pfam PF14183 YwpF-like protein 2 130 3.5E-44 T 01-11-2018 IPR025573 YwpF-like protein DOE78_03065 4111b2eb01c0c1047bc5675f5a4c0de5 350 Pfam PF00487 Fatty acid desaturase 51 290 1.9E-37 T 01-11-2018 IPR005804 Fatty acid desaturase domain GO:0006629 DOE78_18745 9a7f34156c935da0f7d1acc3fec623cd 279 SUPERFAMILY SSF53067 1 152 2.2E-11 T 01-11-2018 DOE78_18745 9a7f34156c935da0f7d1acc3fec623cd 279 Gene3D G3DSA:3.30.420.40 1 173 1.6E-21 T 01-11-2018 DOE78_03150 1f7e584f7db824ecbeea2806d58e151c 52 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 47 7.1E-15 T 01-11-2018 IPR011437 Domain of unknown function DUF1540 DOE78_01335 cb7b66e28a60013478f890aee1f41564 93 Gene3D G3DSA:1.10.1220.10 1 93 5.6E-43 T 01-11-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DOE78_02625 630c1e3c79f19b93e9d2ee90b0ea4940 160 Pfam PF13787 Protein of unknown function with HXXEE motif 9 115 1.8E-14 T 01-11-2018 IPR025671 Protein of unknown function with HXXEE motif DOE78_17135 8174b1f3780e82616d7bb72e592a86f8 485 PIRSF PIRSF005690 3 485 2.2E-136 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_17135 8174b1f3780e82616d7bb72e592a86f8 485 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 24 476 3.1E-160 T 01-11-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DOE78_03995 9b8023d77c5c17e50896fbeb1c848b77 288 Pfam PF02274 Amidinotransferase 26 283 4.4E-52 T 01-11-2018 DOE78_03995 9b8023d77c5c17e50896fbeb1c848b77 288 Gene3D G3DSA:3.75.10.10 5 286 3.7E-73 T 01-11-2018 DOE78_03995 9b8023d77c5c17e50896fbeb1c848b77 288 SUPERFAMILY SSF55909 12 284 1.96E-74 T 01-11-2018 DOE78_01885 8ac1d8060d3b9f5ec529cfbaba0690b4 93 Pfam PF11127 Protein of unknown function (DUF2892) 4 64 6.2E-12 T 01-11-2018 IPR021309 Protein of unknown function DUF2892 DOE78_10255 6cf4f4100ae961792215050150b8e652 61 Pfam PF10055 Uncharacterized small protein (DUF2292) 11 47 2.0E-15 T 01-11-2018 IPR018743 Protein of unknown function DUF2292 DOE78_22255 c474806497b8fcc0b48fc6d03b507e82 75 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 2 73 3.3E-29 T 01-11-2018 IPR019242 Protein of unknown function DUF2198 DOE78_08770 b18c7bca45bfc3165f3ddefa72deffd0 313 Pfam PF00454 Phosphatidylinositol 3- and 4-kinase 104 246 5.9E-11 T 01-11-2018 IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain DOE78_00905 b6c31be71b945168539702070cd801fc 147 Pfam PF10730 Protein of unknown function (DUF2521) 2 147 4.6E-60 T 01-11-2018 IPR019667 Uncharacterised protein family YbaK DOE78_09315 b0b849dafc0a98309bc688d797c6f07a 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 446 5.9E-151 T 01-11-2018 IPR002823 Protein of unknown function DUF112, transmembrane DOE78_04290 374be01695f214eee0b8397282658cdf 212 Pfam PF04854 Protein of unknown function, DUF624 30 102 2.2E-22 T 01-11-2018 IPR006938 Protein of unknown function DUF624 DOE78_06075 56e4e28ae9e476bc2b039aa83207ba34 303 Pfam PF08378 Nuclease-related domain 37 144 3.4E-18 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_14080 85aa072cd1a3997f2ff6b1e48b82f597 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 158 9.6E-32 T 01-11-2018 IPR007387 TRAP transporter, small membrane protein DctQ DOE78_07565 50919274b50c4a1d7df4d207252b4a07 145 Gene3D G3DSA:1.20.1500.10 3 126 7.6E-26 T 01-11-2018 IPR023378 YheA/YmcA-like domain superfamily DOE78_07565 50919274b50c4a1d7df4d207252b4a07 145 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 10 115 6.4E-19 T 01-11-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DOE78_07565 50919274b50c4a1d7df4d207252b4a07 145 SUPERFAMILY SSF158622 4 126 2.09E-32 T 01-11-2018 IPR023378 YheA/YmcA-like domain superfamily DOE78_08975 22d1dae2448ea7d1ee1bdda68b87bcb2 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 316 2.6E-49 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_22940 db821fac29fd6380ff20874cb55e1ad1 276 Gene3D G3DSA:2.60.40.1240 186 271 6.5E-5 T 01-11-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily DOE78_21520 3e8646c95ad21ce6f16a1279f104abac 449 Pfam PF12801 4Fe-4S binding domain 61 98 1.5E-8 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_21520 3e8646c95ad21ce6f16a1279f104abac 449 Pfam PF12801 4Fe-4S binding domain 141 173 0.077 T 01-11-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DOE78_21520 3e8646c95ad21ce6f16a1279f104abac 449 SUPERFAMILY SSF54862 189 254 4.86E-5 T 01-11-2018 DOE78_21520 3e8646c95ad21ce6f16a1279f104abac 449 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 224 235 - T 01-11-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DOE78_14725 698940df173deab11b37bb5665addb2c 359 SUPERFAMILY SSF103501 58 280 4.45E-20 T 01-11-2018 IPR036197 NarG-like superfamily DOE78_22235 923a5356916fe2517cd8684ad5d86ca9 368 Pfam PF13349 Putative adhesin 111 326 2.0E-16 T 01-11-2018 IPR025164 Putative adhesin DOE78_22235 923a5356916fe2517cd8684ad5d86ca9 368 PIRSF PIRSF012569 1 368 3.3E-103 T 01-11-2018 IPR016599 Uncharacterised conserved protein UCP012569 DOE78_12620 0c280e7306f4b8384bf436706eb85218 332 Pfam PF11553 Protein of unknown function (DUF3231) 168 330 2.3E-49 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_12620 0c280e7306f4b8384bf436706eb85218 332 Pfam PF11553 Protein of unknown function (DUF3231) 3 160 7.8E-53 T 01-11-2018 IPR021617 Protein of unknown function DUF3231 DOE78_12620 0c280e7306f4b8384bf436706eb85218 332 Gene3D G3DSA:1.20.1260.10 2 146 2.6E-12 T 01-11-2018 IPR012347 Ferritin-like DOE78_01710 583ea1adb961f8ef55d705324e5a579f 312 Pfam PF00482 Type II secretion system (T2SS), protein F 165 291 1.9E-17 T 01-11-2018 IPR018076 Type II secretion system F domain DOE78_05890 5393cd120dca833438af5a73e6a9b3dd 160 Pfam PF11667 Putative zincin peptidase 34 139 4.9E-20 T 01-11-2018 IPR021683 Putative zincin peptidase DOE78_05170 ac3ce1f7fcdf9c91870bbbeacbae9de2 85 Pfam PF14182 YgaB-like protein 3 78 3.1E-32 T 01-11-2018 IPR025572 YgaB-like protein DOE78_15490 6bc256f74f7091e6ec927d3d54b1703d 192 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 3 188 1.3E-58 T 01-11-2018 IPR018672 Protein of unknown function DUF2140 DOE78_23045 720c0bf10b3497d4e71fb17653b5713b 200 Pfam PF02397 Bacterial sugar transferase 7 199 7.6E-64 T 01-11-2018 IPR003362 Bacterial sugar transferase DOE78_20415 b408580309bc77b7e6442776884eea93 384 Pfam PF01757 Acyltransferase family 7 352 1.8E-32 T 01-11-2018 IPR002656 Acyltransferase 3 GO:0016747 DOE78_13780 840a80c9b611578fe27c52950340b895 438 Pfam PF03888 MucB/RseB N-terminal domain 286 331 5.1E-5 T 01-11-2018 IPR033434 MucB/RseB, N-terminal DOE78_13780 840a80c9b611578fe27c52950340b895 438 Gene3D G3DSA:2.50.20.10 219 333 1.0E-8 T 01-11-2018 DOE78_17865 5f56e41f140aad56ab2989965106e9d8 249 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 15 241 3.1E-37 T 01-11-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DOE78_00150 d55ade6050261783ca120adc8ca9b0ef 72 Pfam PF10704 Protein of unknown function (DUF2508) 1 69 2.0E-27 T 01-11-2018 IPR019644 Protein of unknown function DUF2508 DOE78_06095 9ae7f9c3d52efa47776c2a86ae59bbdb 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 277 5.8E-29 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_16575 283a7f3b6f452f4e8249ecea9f62055a 58 Pfam PF14164 YqzH-like protein 1 58 9.5E-16 T 01-11-2018 IPR025546 YqzH-like protein DOE78_02390 ea6f0d970251b55c7849f5034d0d6fe7 363 Pfam PF03845 Spore germination protein 5 325 2.2E-74 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_02390 ea6f0d970251b55c7849f5034d0d6fe7 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 362 4.2E-72 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_00365 1d378e1f8ed813352719e9699bc014f4 129 Pfam PF04977 Septum formation initiator 44 122 1.5E-16 T 01-11-2018 IPR007060 Septum formation initiator FtsL/DivIC DOE78_15785 297640357382ab9d0a03ecc99d0ed109 71 SUPERFAMILY SSF57938 25 65 7.72E-6 T 01-11-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DOE78_03195 35139613a5d1f95fec1f1a5725476b48 317 Pfam PF13349 Putative adhesin 48 316 1.9E-35 T 01-11-2018 IPR025164 Putative adhesin DOE78_06900 23f5e847f7f704022dc9a245c0e6d720 43 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 18 41 1.2E-12 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_06900 23f5e847f7f704022dc9a245c0e6d720 43 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 15 39 2.0E-13 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_09765 e9149a7c37a6d1f872abb949785c84ba 188 SUPERFAMILY SSF55729 33 159 1.74E-6 T 01-11-2018 IPR016181 Acyl-CoA N-acyltransferase DOE78_10555 e293271e75904947b8665027b968e1c2 169 Pfam PF07681 DoxX 15 116 2.9E-8 T 01-11-2018 IPR032808 DoxX family DOE78_21545 37d24c80a7be27b8e3a76159715fd412 189 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 16 169 8.6E-20 T 01-11-2018 IPR025847 MEDS domain DOE78_08795 0d353a85c57da72111e75d2e74df018b 34 Pfam PF09671 Spore coat protein (Spore_GerQ) 2 32 2.3E-12 T 01-11-2018 IPR014099 Spore coat protein GerQ DOE78_21185 446db13d3e8cb4624a5ef61763b2c921 79 Pfam PF10830 Protein of unknown function (DUF2553) 7 79 9.4E-25 T 01-11-2018 IPR020140 Uncharacterised protein family YusG DOE78_21185 446db13d3e8cb4624a5ef61763b2c921 79 ProDom PD058325 YUSG BH3483 7 79 2.0E-10 T 01-11-2018 IPR020140 Uncharacterised protein family YusG DOE78_12080 9dabcb3024ae79f5741caa322e2d4b8c 141 Pfam PF13160 Protein of unknown function (DUF3995) 14 135 1.1E-34 T 01-11-2018 IPR025058 Protein of unknown function DUF3995 DOE78_24535 1f3b57855c7d49d9da553cb09c2c3ac1 89 SUPERFAMILY SSF46689 2 88 1.29E-14 T 01-11-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DOE78_18870 d94831e13ddbc63d5440ce2217a15b7b 226 Pfam PF14265 Domain of unknown function (DUF4355) 28 130 9.5E-6 T 01-11-2018 IPR025580 Protein of unknown function DUF4355 DOE78_06105 5c4c16d0e3e84586b00f0c953dd0b05e 243 Pfam PF03591 AzlC protein 23 158 1.7E-38 T 01-11-2018 IPR011606 Branched-chain amino acid transport, permease DOE78_21700 ad474cc11955e62d86a619613cbe6313 102 Pfam PF07875 Coat F domain 15 76 7.4E-24 T 01-11-2018 IPR012851 Spore coat protein CotF-like DOE78_15995 54b35c1f8ad306ed8c1b9b143b023267 227 Pfam PF04298 Putative neutral zinc metallopeptidase 5 219 2.4E-91 T 01-11-2018 IPR007395 Putative neutral zinc metallopeptidase DOE78_02465 87d47916cecf25d97d898e5468290b8e 132 Pfam PF03994 Domain of Unknown Function (DUF350) 10 63 1.6E-13 T 01-11-2018 IPR007140 Protein of unknown function DUF350 DOE78_02465 87d47916cecf25d97d898e5468290b8e 132 Pfam PF03994 Domain of Unknown Function (DUF350) 76 130 4.6E-13 T 01-11-2018 IPR007140 Protein of unknown function DUF350 DOE78_06840 e7809aca7920abcf42ce40b5afd9fb84 189 Pfam PF08876 Domain of unknown function (DUF1836) 19 122 4.5E-32 T 01-11-2018 IPR014975 Protein of unknown function DUF1836 DOE78_16675 9d85231060ba76fc4e687fe757b8ba27 265 Pfam PF12679 ABC-2 family transporter protein 2 262 2.1E-27 T 01-11-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DOE78_21715 c11e3de3a2728b87e6a256f88332d782 119 Pfam PF07875 Coat F domain 18 77 3.8E-18 T 01-11-2018 IPR012851 Spore coat protein CotF-like DOE78_09175 d9b06387934b4379b6f8f94acddaa2b1 108 Pfam PF09287 CEP-1, DNA binding 29 106 9.6E-4 T 01-11-2018 IPR015367 Transcription factor CEP-1, DNA-binding domain DOE78_19445 03397d2d7961d825c4fb61c13bc47749 361 Pfam PF10776 Protein of unknown function (DUF2600) 20 348 3.8E-150 T 01-11-2018 IPR019712 Protein of unknown function DUF2600 DOE78_11835 7e65fd5d002e6b66dcde74666ea72f0a 278 Pfam PF08378 Nuclease-related domain 38 148 7.7E-24 T 01-11-2018 IPR011528 Nuclease-related domain, NERD DOE78_18620 d22e4bbac4ead3e33cf392901537f56b 173 Pfam PF06271 RDD family 41 165 2.5E-23 T 01-11-2018 IPR010432 RDD DOE78_15925 a12a9b3be94b94dd6612354b0b40f1bd 56 PIRSF PIRSF036698 1 56 1.1E-33 T 01-11-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA DOE78_15925 a12a9b3be94b94dd6612354b0b40f1bd 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 2.7E-24 T 01-11-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA DOE78_16915 ce5cf8ce853e63cf13f2baf796a73776 226 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 37 226 2.7E-61 T 01-11-2018 IPR014195 Sporulation stage III, protein AG DOE78_08315 f9798a881653c96986eb07ceb2d3de56 205 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 1 200 1.0E-11 T 01-11-2018 DOE78_09760 6522c98e0afe4ba72c73741e7ec5186a 223 Pfam PF02698 DUF218 domain 72 216 1.2E-27 T 01-11-2018 IPR003848 Domain of unknown function DUF218 DOE78_01725 37f09626ec51927372f513c1e98f43e8 254 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 24 71 5.7E-9 T 01-11-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal DOE78_20915 541e97a1a36af86f979b96a85888deb1 357 SUPERFAMILY SSF53474 50 335 5.65E-25 T 01-11-2018 IPR029058 Alpha/Beta hydrolase fold DOE78_22230 1e13d7ab9774276e39e2549c4b1cf084 120 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 107 6.6E-29 T 01-11-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV DOE78_14650 440ad66b5312060d72864a13dcb3abc7 83 Pfam PF10719 Late competence development protein ComFB 1 81 1.3E-16 T 01-11-2018 IPR019657 Late competence development protein ComFB DOE78_14340 37a2375d3575aba2b595aa254257a7fc 304 Pfam PF06207 Protein of unknown function (DUF1002) 46 265 4.5E-71 T 01-11-2018 IPR009343 Protein of unknown function DUF1002 DOE78_17705 910b3848c7efa2133d3d3967e9977fa4 43 Pfam PF13056 Protein of unknown function (DUF3918) 1 43 1.1E-19 T 01-11-2018 IPR025029 Protein of unknown function DUF3918 DOE78_03250 4c46dce8a39e2f4464b8cf921f00dc53 145 Pfam PF06935 Protein of unknown function (DUF1284) 22 128 1.4E-22 T 01-11-2018 IPR009702 Protein of unknown function DUF1284 DOE78_13335 213706b45be1bbd5bec258acdee521b3 203 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 5 188 5.9E-9 T 01-11-2018 IPR003740 Uncharacterised membrane protein YitT DOE78_11290 46e044e6b1e9231da845174e41200505 129 Pfam PF07485 Domain of Unknown Function (DUF1259) 7 122 2.4E-34 T 01-11-2018 IPR011094 Uncharacterised protein family, LppY/LpqO DOE78_23170 d477a12506c8094437e314ceab6dcfd2 154 SUPERFAMILY SSF54427 40 152 1.23E-8 T 01-11-2018 IPR032710 NTF2-like domain superfamily DOE78_13730 bbd8e81a0cdd5a01fcd406e2307c2760 224 Gene3D G3DSA:2.60.120.260 19 210 1.1E-5 T 01-11-2018 IPR008979 Galactose-binding-like domain superfamily DOE78_19405 caa5009ccb77057c1eccadae1d753316 439 Pfam PF02447 GntP family permease 5 433 8.9E-9 T 01-11-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DOE78_14520 a88494dd6caf3f100529403ee285eacd 43 Pfam PF14115 YuzL-like protein 4 42 1.9E-15 T 01-11-2018 IPR025625 YuzL-like protein DOE78_06895 aec5d6133f07d20a888f5cb5056954f8 35 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 7 29 1.3E-12 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_06895 aec5d6133f07d20a888f5cb5056954f8 35 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 6 29 3.9E-14 T 01-11-2018 IPR010070 Sporulation protein YjcZ-like DOE78_04565 45eae1287d9eebdfe670007cd4a94947 60 Pfam PF08863 YolD-like protein 5 59 3.7E-7 T 01-11-2018 IPR014962 YolD-like protein DOE78_04420 c2fe0ae20428b6f219eaa34aa9b46d48 330 Pfam PF04892 VanZ like family 14 133 1.7E-16 T 01-11-2018 IPR006976 VanZ-like DOE78_19835 f3e128ab93f9e7d850d78265f4f6455f 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 317 3.8E-47 T 01-11-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DOE78_09825 b1fc346e1c950fa1de9b6d2c3a491dc9 66 Gene3D G3DSA:1.10.150.20 6 64 2.9E-9 T 01-11-2018 DOE78_09825 b1fc346e1c950fa1de9b6d2c3a491dc9 66 SUPERFAMILY SSF47789 11 64 2.09E-9 T 01-11-2018 DOE78_01210 b20df2a7322158e58bbfa2d87a08059f 371 Pfam PF03845 Spore germination protein 4 315 1.9E-33 T 01-11-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DOE78_06205 3cfcd5104aced6074e7b099e21e21d41 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 1.7E-28 T 01-11-2018 IPR019618 Spore germination protein GerPA/GerPF DOE78_07555 35267a4b911a774231a8ea6c4d05ef10 79 Pfam PF14003 YlbE-like protein 13 73 8.5E-29 T 01-11-2018 IPR025613 YlbE-like protein DOE78_23135 2dca5d49d95b356faa9440463ce36868 561 Pfam PF04122 Putative cell wall binding repeat 2 460 552 3.4E-20 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23135 2dca5d49d95b356faa9440463ce36868 561 Pfam PF04122 Putative cell wall binding repeat 2 253 343 1.9E-15 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_23135 2dca5d49d95b356faa9440463ce36868 561 Pfam PF04122 Putative cell wall binding repeat 2 356 445 1.6E-15 T 01-11-2018 IPR007253 Putative cell wall binding repeat 2 DOE78_05700 bdd0153567288de5cf3b12da402450c8 223 Pfam PF04012 PspA/IM30 family 2 218 1.8E-32 T 01-11-2018 IPR007157 PspA/IM30 DOE78_18335 15248bdad5fc8dceb0d467da4a0d74d0 195 Pfam PF09335 SNARE associated Golgi protein 35 149 2.0E-14 T 01-11-2018 IPR032816 SNARE associated Golgi protein DOE78_15370 f529dc5e2b986d90f20b7732891bd81d 388 Pfam PF10720 Protein of unknown function (DUF2515) 71 368 6.1E-111 T 01-11-2018 IPR019658 Protein of unknown function DUF2515 DOE78_17535 e5cddc0a83e2e891a07e5cae9ee4c092 44 Pfam PF14141 YqzM-like protein 2 43 1.7E-26 T 01-11-2018 IPR025416 YqzM-like protein DOE78_11340 5323b41ff078155d83e9fbcf1a102fb0 333 Pfam PF13280 WYL domain 145 327 4.2E-35 T 01-11-2018 IPR026881 WYL domain DOE78_14665 f7d9c8ed8be7ed7d1a253406420b7b89 128 Pfam PF07070 SpoOM protein 3 128 4.1E-22 T 01-11-2018 IPR009776 Sporulation stage 0, protein M DOE78_02010 4abdf1356cb54b8f6d66fa78f63a960e 334 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 12 331 6.2E-108 T 01-11-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily DOE78_22435 ccb751f27b631fd5f60f6feba8a6d176 82 Pfam PF04226 Transglycosylase associated protein 33 78 3.3E-10 T 01-11-2018 IPR007341 Transglycosylase-associated protein GO:0016021