BKP58_00095 SM00530 Helix-turn-helix XRE-family like proteins BKP58_00100 SM00870 BKP58_00100 BKP58_00115 SM00919 Malic enzyme, NAD binding domain BKP58_00115 SM01274 BKP58_00115 BKP58_00155 SM00936 Penicillin-binding protein 5, C-terminal domain BKP58_00165 SM00387 Histidine kinase-like ATPases BKP58_00285 SM00645 Papain family cysteine protease BKP58_00295 SM00477 DNA/RNA non-specific endonuclease BKP58_00295 SM00892 DNA/RNA non-specific endonuclease BKP58_00385 SM00936 Penicillin-binding protein 5, C-terminal domain BKP58_00400 SM00363 S4 RNA-binding domain BKP58_00420 SM00448 cheY-homologous receiver domain BKP58_00420 SM00862 Transcriptional regulatory protein, C terminal BKP58_00425 SM00091 PAS domain BKP58_00425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_00425 SM00387 Histidine kinase-like ATPases BKP58_00425 SM00388 His Kinase A (phosphoacceptor) domain BKP58_00465 SM00487 DEAD-like helicases superfamily BKP58_00465 SM00490 helicase superfamily c-terminal domain BKP58_00475 SM00257 Lysin motif BKP58_00495 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BKP58_00535 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_00540 SM01240 BKP58_00540 BKP58_00590 SM00411 bacterial (prokaryotic) histone like domain BKP58_00620 SM00562 BKP58_00620 BKP58_00630 SM00138 Methyltransferase, chemotaxis proteins BKP58_00695 SM00028 Tetratricopeptide repeats BKP58_00700 SM00914 BKP58_00700 BKP58_00750 SM00851 MGS-like domain BKP58_00790 SM00479 BKP58_00790 BKP58_00790 SM00487 DEAD-like helicases superfamily BKP58_00790 SM00491 BKP58_00790 BKP58_00820 SM00478 endonuclease III BKP58_00820 SM00525 BKP58_00820 BKP58_00880 SM00487 DEAD-like helicases superfamily BKP58_00880 SM00490 helicase superfamily c-terminal domain BKP58_00910 SM00981 BKP58_00910 BKP58_00920 SM00491 BKP58_00920 BKP58_00935 SM00354 helix_turn _helix lactose operon repressor BKP58_01000 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BKP58_01000 SM00475 5'-3' exonuclease BKP58_01040 SM00357 Cold shock protein domain BKP58_01060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_01065 SM00567 E-Z type HEAT repeats BKP58_01065 SM00932 Scaffold protein Nfu/NifU N terminal BKP58_01110 SM00382 ATPases associated with a variety of cellular activities BKP58_01155 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_01220 SM00882 Coenzyme A transferase BKP58_01225 SM00882 Coenzyme A transferase BKP58_01275 SM00014 Acid phosphatase homologues BKP58_01310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_01310 SM00245 tail specific protease BKP58_01415 SM00257 Lysin motif BKP58_01425 SM00382 ATPases associated with a variety of cellular activities BKP58_01430 SM00327 von Willebrand factor (vWF) type A domain BKP58_01435 SM00861 Transketolase, pyrimidine binding domain BKP58_01525 SM00341 Helicase and RNase D C-terminal BKP58_01525 SM00487 DEAD-like helicases superfamily BKP58_01525 SM00490 helicase superfamily c-terminal domain BKP58_01525 SM00956 BKP58_01525 BKP58_01530 SM00257 Lysin motif BKP58_01535 SM00421 helix_turn_helix, Lux Regulon BKP58_01535 SM00448 cheY-homologous receiver domain BKP58_01575 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_01590 SM00871 Bacterial transcription activator, effector binding domain BKP58_01595 SM00849 Metallo-beta-lactamase superfamily BKP58_01610 SM00342 helix_turn_helix, arabinose operon control protein BKP58_01625 SM00860 SMI1 / KNR4 family BKP58_01635 SM00860 SMI1 / KNR4 family BKP58_01640 SM00860 SMI1 / KNR4 family BKP58_01645 SM00860 SMI1 / KNR4 family BKP58_01805 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_01810 SM00382 ATPases associated with a variety of cellular activities BKP58_01840 SM00822 BKP58_01840 BKP58_01880 SM00829 Enoylreductase BKP58_01940 SM00823 Phosphopantetheine attachment site BKP58_01975 SM00878 Biotin carboxylase C-terminal domain BKP58_02035 SM01067 Cellulose binding domain BKP58_02055 SM00434 DNA Topoisomerase IV BKP58_02060 SM00387 Histidine kinase-like ATPases BKP58_02060 SM00433 TopoisomeraseII BKP58_02065 SM00881 CoA binding domain BKP58_02070 SM01207 BKP58_02070 BKP58_02140 SM00448 cheY-homologous receiver domain BKP58_02165 SM00861 Transketolase, pyrimidine binding domain BKP58_02175 SM00857 Resolvase, N terminal domain BKP58_02180 SM00257 Lysin motif BKP58_02325 SM01005 Alanine racemase, C-terminal domain BKP58_02335 SM00318 Staphylococcal nuclease homologues BKP58_02430 SM00382 ATPases associated with a variety of cellular activities BKP58_02440 SM00860 SMI1 / KNR4 family BKP58_02480 SM00860 SMI1 / KNR4 family BKP58_02485 SM00257 Lysin motif BKP58_02485 SM00644 BKP58_02485 BKP58_02620 SM00891 ERCC4 domain BKP58_02630 SM00885 D5 N terminal like BKP58_02675 SM00530 Helix-turn-helix XRE-family like proteins BKP58_02680 SM00530 Helix-turn-helix XRE-family like proteins BKP58_02695 SM01230 BKP58_02695 BKP58_02700 SM00422 helix_turn_helix, mercury resistance BKP58_02720 SM00382 ATPases associated with a variety of cellular activities BKP58_02725 SM00646 BKP58_02725 BKP58_02810 SM00849 Metallo-beta-lactamase superfamily BKP58_02860 SM00507 HNH nucleases BKP58_02925 SM00853 MutL C terminal dimerisation domain BKP58_02925 SM01340 BKP58_02925 BKP58_02930 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BKP58_02930 SM00534 ATPase domain of DNA mismatch repair MUTS family BKP58_02945 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_02955 SM00829 Enoylreductase BKP58_02970 SM00322 K homology RNA-binding domain BKP58_02970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_02980 SM00382 ATPases associated with a variety of cellular activities BKP58_02985 SM00852 Probable molybdopterin binding domain BKP58_02995 SM00530 Helix-turn-helix XRE-family like proteins BKP58_03030 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_03030 SM00866 BKP58_03030 BKP58_03035 SM00382 ATPases associated with a variety of cellular activities BKP58_03035 SM00843 BKP58_03035 BKP58_03050 SM00849 Metallo-beta-lactamase superfamily BKP58_03055 SM01130 BKP58_03055 BKP58_03065 SM00859 Semialdehyde dehydrogenase, NAD binding domain BKP58_03100 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_03100 SM00322 K homology RNA-binding domain BKP58_03105 SM01387 BKP58_03105 BKP58_03110 SM00904 Riboflavin kinase BKP58_03145 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_03145 SM00322 K homology RNA-binding domain BKP58_03155 SM00479 BKP58_03155 BKP58_03155 SM00481 DNA polymerase alpha chain like domain BKP58_03165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_03225 SM00260 Two component signalling adaptor domain BKP58_03230 SM00073 Histidine Phosphotransfer domain BKP58_03230 SM00260 Two component signalling adaptor domain BKP58_03230 SM00387 Histidine kinase-like ATPases BKP58_03230 SM01231 BKP58_03230 BKP58_03235 SM00448 cheY-homologous receiver domain BKP58_03245 SM00962 SRP54-type protein, GTPase domain BKP58_03280 SM00448 cheY-homologous receiver domain BKP58_03330 SM00382 ATPases associated with a variety of cellular activities BKP58_03370 SM00382 ATPases associated with a variety of cellular activities BKP58_03370 SM01086 C-terminal, D2-small domain, of ClpB protein BKP58_03390 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BKP58_03390 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BKP58_03390 SM00493 BKP58_03390 BKP58_03400 SM00881 CoA binding domain BKP58_03460 SM00382 ATPases associated with a variety of cellular activities BKP58_03460 SM00962 SRP54-type protein, GTPase domain BKP58_03460 SM00963 SRP54-type protein, helical bundle domain BKP58_03475 SM00382 ATPases associated with a variety of cellular activities BKP58_03475 SM00962 SRP54-type protein, GTPase domain BKP58_03475 SM00963 SRP54-type protein, helical bundle domain BKP58_03480 SM00968 SMC proteins Flexible Hinge Domain BKP58_03485 SM00358 Double-stranded RNA binding motif BKP58_03485 SM00535 Ribonuclease III family BKP58_03495 SM00822 BKP58_03495 BKP58_03500 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BKP58_03515 SM00487 DEAD-like helicases superfamily BKP58_03515 SM00490 helicase superfamily c-terminal domain BKP58_03530 SM01120 BKP58_03530 BKP58_03530 SM01121 BKP58_03530 BKP58_03550 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BKP58_03565 SM00220 Serine/Threonine protein kinases, catalytic domain BKP58_03565 SM00740 BKP58_03565 BKP58_03570 SM00331 Sigma factor PP2C-like phosphatases BKP58_03570 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BKP58_03595 SM00487 DEAD-like helicases superfamily BKP58_03595 SM00490 helicase superfamily c-terminal domain BKP58_03605 SM01409 BKP58_03605 BKP58_03610 SM00072 Guanylate kinase homologues. BKP58_03625 SM00831 Cation transporter/ATPase, N-terminus BKP58_03675 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BKP58_03690 SM00851 MGS-like domain BKP58_03690 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BKP58_03695 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BKP58_03720 SM00363 S4 RNA-binding domain BKP58_03745 SM00363 S4 RNA-binding domain BKP58_03780 SM00382 ATPases associated with a variety of cellular activities BKP58_03805 SM00864 Tubulin/FtsZ family, GTPase domain BKP58_03805 SM00865 Tubulin/FtsZ family, C-terminal domain BKP58_03810 SM00842 Cell division protein FtsA BKP58_03875 SM00740 BKP58_03875 BKP58_03885 SM00740 BKP58_03885 BKP58_03945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_03995 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_04040 SM00878 Biotin carboxylase C-terminal domain BKP58_04065 SM00670 Large family of predicted nucleotide-binding domains BKP58_04085 SM00838 Elongation factor G C-terminus BKP58_04180 SM00861 Transketolase, pyrimidine binding domain BKP58_04215 SM00849 Metallo-beta-lactamase superfamily BKP58_04235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKP58_04235 SM00091 PAS domain BKP58_04235 SM00387 Histidine kinase-like ATPases BKP58_04235 SM00388 His Kinase A (phosphoacceptor) domain BKP58_04240 SM00966 SpoVT / AbrB like domain BKP58_04265 SM00382 ATPases associated with a variety of cellular activities BKP58_04290 SM00420 helix_turn_helix, Deoxyribose operon repressor BKP58_04290 SM01134 BKP58_04290 BKP58_04295 SM01066 Carbohydrate binding domain BKP58_04300 SM00382 ATPases associated with a variety of cellular activities BKP58_04315 SM00382 ATPases associated with a variety of cellular activities BKP58_04340 SM00852 Probable molybdopterin binding domain BKP58_04450 SM00052 Putative diguanylate phosphodiesterase BKP58_04465 SM00257 Lysin motif BKP58_04480 SM00260 Two component signalling adaptor domain BKP58_04480 SM00448 cheY-homologous receiver domain BKP58_04495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKP58_04495 SM00091 PAS domain BKP58_04495 SM00387 Histidine kinase-like ATPases BKP58_04495 SM00388 His Kinase A (phosphoacceptor) domain BKP58_04520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKP58_04520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_04555 SM01061 CAT RNA binding domain BKP58_04560 SM00354 helix_turn _helix lactose operon repressor BKP58_04645 SM00382 ATPases associated with a variety of cellular activities BKP58_04645 SM01086 C-terminal, D2-small domain, of ClpB protein BKP58_04660 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_04665 SM00387 Histidine kinase-like ATPases BKP58_04665 SM00388 His Kinase A (phosphoacceptor) domain BKP58_04690 SM01007 Class II Aldolase and Adducin N-terminal domain BKP58_04735 SM00091 PAS domain BKP58_04735 SM00387 Histidine kinase-like ATPases BKP58_04735 SM00388 His Kinase A (phosphoacceptor) domain BKP58_04805 SM00052 Putative diguanylate phosphodiesterase BKP58_04805 SM00267 diguanylate cyclase BKP58_04810 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BKP58_04845 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_04860 SM00422 helix_turn_helix, mercury resistance BKP58_04865 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_04865 SM00924 MgtE intracellular N domain BKP58_04895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_04895 SM00387 Histidine kinase-like ATPases BKP58_04895 SM00388 His Kinase A (phosphoacceptor) domain BKP58_04900 SM00448 cheY-homologous receiver domain BKP58_04900 SM00862 Transcriptional regulatory protein, C terminal BKP58_04915 SM00382 ATPases associated with a variety of cellular activities BKP58_04955 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_04970 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BKP58_05030 SM00382 ATPases associated with a variety of cellular activities BKP58_05040 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKP58_05055 SM00382 ATPases associated with a variety of cellular activities BKP58_05080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_05130 SM00257 Lysin motif BKP58_05130 SM00644 BKP58_05130 BKP58_05195 SM00257 Lysin motif BKP58_05300 SM00382 ATPases associated with a variety of cellular activities BKP58_05315 SM00530 Helix-turn-helix XRE-family like proteins BKP58_05340 SM00257 Lysin motif BKP58_05340 SM00644 BKP58_05340 BKP58_05355 SM00028 Tetratricopeptide repeats BKP58_05390 SM00858 BKP58_05390 BKP58_05400 SM00354 helix_turn _helix lactose operon repressor BKP58_05420 SM00829 Enoylreductase BKP58_05460 SM00382 ATPases associated with a variety of cellular activities BKP58_05650 SM00530 Helix-turn-helix XRE-family like proteins BKP58_05675 SM00860 SMI1 / KNR4 family BKP58_05685 SM00028 Tetratricopeptide repeats BKP58_05720 SM00530 Helix-turn-helix XRE-family like proteins BKP58_05755 SM00530 Helix-turn-helix XRE-family like proteins BKP58_05945 SM00954 Region found in RelA / SpoT proteins BKP58_05955 SM01118 BKP58_05955 BKP58_06020 SM00382 ATPases associated with a variety of cellular activities BKP58_06025 SM00382 ATPases associated with a variety of cellular activities BKP58_06070 SM00382 ATPases associated with a variety of cellular activities BKP58_06075 SM00382 ATPases associated with a variety of cellular activities BKP58_06085 SM00825 Beta-ketoacyl synthase BKP58_06145 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BKP58_06150 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BKP58_06170 SM00859 Semialdehyde dehydrogenase, NAD binding domain BKP58_06235 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_06270 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_06290 SM00354 helix_turn _helix lactose operon repressor BKP58_06295 SM00342 helix_turn_helix, arabinose operon control protein BKP58_06435 SM00354 helix_turn _helix lactose operon repressor BKP58_06470 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_06505 SM00894 Excalibur calcium-binding domain BKP58_06520 SM00914 BKP58_06520 BKP58_06535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKP58_06555 SM00855 Phosphoglycerate mutase family BKP58_06565 SM00829 Enoylreductase BKP58_06605 SM00849 Metallo-beta-lactamase superfamily BKP58_06620 SM01022 BKP58_06620 BKP58_06705 SM00382 ATPases associated with a variety of cellular activities BKP58_06735 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_06765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_06785 SM00382 ATPases associated with a variety of cellular activities BKP58_06815 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_06870 SM00382 ATPases associated with a variety of cellular activities BKP58_06875 SM00382 ATPases associated with a variety of cellular activities BKP58_06935 SM01091 Transporter associated domain BKP58_06945 SM00422 helix_turn_helix, mercury resistance BKP58_06950 SM01091 Transporter associated domain BKP58_06955 SM00563 Phosphate acyltransferases BKP58_06985 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_07015 SM00257 Lysin motif BKP58_07020 SM00098 Alkaline phosphatase homologues BKP58_07040 SM00257 Lysin motif BKP58_07060 SM00421 helix_turn_helix, Lux Regulon BKP58_07060 SM00448 cheY-homologous receiver domain BKP58_07065 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKP58_07065 SM00387 Histidine kinase-like ATPases BKP58_07110 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_07120 SM00363 S4 RNA-binding domain BKP58_07130 SM00318 Staphylococcal nuclease homologues BKP58_07155 SM00028 Tetratricopeptide repeats BKP58_07210 SM00530 Helix-turn-helix XRE-family like proteins BKP58_07265 SM00267 diguanylate cyclase BKP58_07275 SM00357 Cold shock protein domain BKP58_07285 SM00382 ATPases associated with a variety of cellular activities BKP58_07290 SM00382 ATPases associated with a variety of cellular activities BKP58_07295 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_07325 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_07340 SM00763 PrkA AAA domain BKP58_07370 SM00567 E-Z type HEAT repeats BKP58_07385 SM00530 Helix-turn-helix XRE-family like proteins BKP58_07415 SM00062 Bacterial periplasmic substrate-binding proteins BKP58_07420 SM00382 ATPases associated with a variety of cellular activities BKP58_07425 SM01060 BKP58_07425 BKP58_07595 SM00382 ATPases associated with a variety of cellular activities BKP58_07625 SM00478 endonuclease III BKP58_07625 SM00525 BKP58_07625 BKP58_07655 SM00287 Bacterial SH3 domain homologues BKP58_07735 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_07790 SM00421 helix_turn_helix, Lux Regulon BKP58_07790 SM00448 cheY-homologous receiver domain BKP58_07795 SM00387 Histidine kinase-like ATPases BKP58_07815 SM00342 helix_turn_helix, arabinose operon control protein BKP58_07830 SM00382 ATPases associated with a variety of cellular activities BKP58_07835 SM00382 ATPases associated with a variety of cellular activities BKP58_07895 SM00382 ATPases associated with a variety of cellular activities BKP58_07910 SM00861 Transketolase, pyrimidine binding domain BKP58_07945 SM00478 endonuclease III BKP58_08015 SM00226 Low molecular weight phosphatase family BKP58_08055 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_08055 SM00866 BKP58_08055 BKP58_08060 SM00642 Alpha-amylase domain BKP58_08135 SM00849 Metallo-beta-lactamase superfamily BKP58_08155 SM00448 cheY-homologous receiver domain BKP58_08160 SM00387 Histidine kinase-like ATPases BKP58_08170 SM00656 BKP58_08170 BKP58_08180 SM00487 DEAD-like helicases superfamily BKP58_08180 SM00490 helicase superfamily c-terminal domain BKP58_08185 SM00382 ATPases associated with a variety of cellular activities BKP58_08210 SM00422 helix_turn_helix, mercury resistance BKP58_08220 SM00382 ATPases associated with a variety of cellular activities BKP58_08225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKP58_08295 SM00894 Excalibur calcium-binding domain BKP58_08400 SM00342 helix_turn_helix, arabinose operon control protein BKP58_08430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_08430 SM00387 Histidine kinase-like ATPases BKP58_08485 SM00028 Tetratricopeptide repeats BKP58_08525 SM00046 Diacylglycerol kinase catalytic domain (presumed) BKP58_08540 SM00845 GatB domain BKP58_08585 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BKP58_08585 SM00292 breast cancer carboxy-terminal domain BKP58_08585 SM00532 Ligase N family BKP58_08635 SM00344 helix_turn_helix ASNC type BKP58_08640 SM01209 BKP58_08640 BKP58_08640 SM01210 BKP58_08640 BKP58_08645 SM00798 AICARFT/IMPCHase bienzyme BKP58_08645 SM00851 MGS-like domain BKP58_08670 SM01211 BKP58_08670 BKP58_08685 SM00998 Adenylosuccinate lyase C-terminus BKP58_08695 SM01001 AIR carboxylase BKP58_08735 SM00460 Transglutaminase/protease-like homologues BKP58_08810 SM00829 Enoylreductase BKP58_08855 SM00829 Enoylreductase BKP58_08860 SM00028 Tetratricopeptide repeats BKP58_08860 SM00382 ATPases associated with a variety of cellular activities BKP58_08880 SM00883 Chaperonin 10 Kd subunit BKP58_08905 SM00881 CoA binding domain BKP58_08915 SM00382 ATPases associated with a variety of cellular activities BKP58_09000 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_09000 SM00866 BKP58_09000 BKP58_09035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_09055 SM00098 Alkaline phosphatase homologues BKP58_09070 SM00257 Lysin motif BKP58_09070 SM00636 BKP58_09070 BKP58_09075 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_09075 SM00895 BKP58_09075 BKP58_09090 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_09090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_09105 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_09120 SM00382 ATPases associated with a variety of cellular activities BKP58_09210 SM00422 helix_turn_helix, mercury resistance BKP58_09210 SM00871 Bacterial transcription activator, effector binding domain BKP58_09230 SM00421 helix_turn_helix, Lux Regulon BKP58_09230 SM00448 cheY-homologous receiver domain BKP58_09235 SM00387 Histidine kinase-like ATPases BKP58_09250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_09265 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_09290 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_09315 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_09360 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_09365 SM00342 helix_turn_helix, arabinose operon control protein BKP58_09365 SM00871 Bacterial transcription activator, effector binding domain BKP58_09375 SM00342 helix_turn_helix, arabinose operon control protein BKP58_09385 SM01058 CarD-like/TRCF domain BKP58_09390 SM00357 Cold shock protein domain BKP58_09420 SM00530 Helix-turn-helix XRE-family like proteins BKP58_09470 SM00028 Tetratricopeptide repeats BKP58_09580 SM00530 Helix-turn-helix XRE-family like proteins BKP58_09630 SM00731 SprT homologues. BKP58_09640 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_09640 SM00732 Likely ribonuclease with RNase H fold. BKP58_09645 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_09665 SM00331 Sigma factor PP2C-like phosphatases BKP58_09665 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BKP58_09685 SM00331 Sigma factor PP2C-like phosphatases BKP58_09690 SM00387 Histidine kinase-like ATPases BKP58_09715 SM01005 Alanine racemase, C-terminal domain BKP58_09745 SM00487 DEAD-like helicases superfamily BKP58_09745 SM00490 helicase superfamily c-terminal domain BKP58_09795 SM00382 ATPases associated with a variety of cellular activities BKP58_09815 SM00448 cheY-homologous receiver domain BKP58_09820 SM00091 PAS domain BKP58_09820 SM00387 Histidine kinase-like ATPases BKP58_09880 SM00752 Horizontally Transferred TransMembrane Domain BKP58_09905 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BKP58_09905 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BKP58_09905 SM00493 BKP58_09905 BKP58_09910 SM00344 helix_turn_helix ASNC type BKP58_09985 SM00346 helix_turn_helix isocitrate lyase regulation BKP58_09990 SM00797 Allophanate hydrolase subunit 2 BKP58_09995 SM00796 Allophanate hydrolase subunit 1 BKP58_10040 SM01329 BKP58_10040 BKP58_10065 SM00420 helix_turn_helix, Deoxyribose operon repressor BKP58_10100 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_10105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_10140 SM00382 ATPases associated with a variety of cellular activities BKP58_10170 SM00028 Tetratricopeptide repeats BKP58_10175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_10175 SM00387 Histidine kinase-like ATPases BKP58_10175 SM00388 His Kinase A (phosphoacceptor) domain BKP58_10180 SM00448 cheY-homologous receiver domain BKP58_10180 SM00862 Transcriptional regulatory protein, C terminal BKP58_10190 SM00382 ATPases associated with a variety of cellular activities BKP58_10215 SM00710 Parallel beta-helix repeats BKP58_10215 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BKP58_10255 SM00062 Bacterial periplasmic substrate-binding proteins BKP58_10265 SM00382 ATPases associated with a variety of cellular activities BKP58_10280 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_10305 SM00823 Phosphopantetheine attachment site BKP58_10310 SM00823 Phosphopantetheine attachment site BKP58_10310 SM01294 BKP58_10310 BKP58_10315 SM00823 Phosphopantetheine attachment site BKP58_10315 SM01294 BKP58_10315 BKP58_10330 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BKP58_10370 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_10390 SM00062 Bacterial periplasmic substrate-binding proteins BKP58_10430 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKP58_10595 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_10595 SM00382 ATPases associated with a variety of cellular activities BKP58_10600 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_10665 SM00382 ATPases associated with a variety of cellular activities BKP58_10675 SM00642 Alpha-amylase domain BKP58_10690 SM00028 Tetratricopeptide repeats BKP58_10730 SM00448 cheY-homologous receiver domain BKP58_10730 SM00850 LytTr DNA-binding domain BKP58_10755 SM00870 BKP58_10755 BKP58_10800 SM00327 von Willebrand factor (vWF) type A domain BKP58_10825 SM00382 ATPases associated with a variety of cellular activities BKP58_10830 SM00387 Histidine kinase-like ATPases BKP58_10830 SM00388 His Kinase A (phosphoacceptor) domain BKP58_10835 SM00448 cheY-homologous receiver domain BKP58_10835 SM00862 Transcriptional regulatory protein, C terminal BKP58_10855 SM00858 BKP58_10855 BKP58_10860 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_10860 SM00895 BKP58_10860 BKP58_10865 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKP58_10880 SM01130 BKP58_10880 BKP58_10885 SM00448 cheY-homologous receiver domain BKP58_10890 SM00387 Histidine kinase-like ATPases BKP58_10930 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_10930 SM00866 BKP58_10930 BKP58_10950 SM00450 Rhodanese Homology Domain BKP58_10955 SM00342 helix_turn_helix, arabinose operon control protein BKP58_11010 SM00257 Lysin motif BKP58_11025 SM00342 helix_turn_helix, arabinose operon control protein BKP58_11055 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_11130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_11130 SM00388 His Kinase A (phosphoacceptor) domain BKP58_11170 SM00342 helix_turn_helix, arabinose operon control protein BKP58_11275 SM00342 helix_turn_helix, arabinose operon control protein BKP58_11395 SM01251 BKP58_11395 BKP58_11410 SM00646 BKP58_11410 BKP58_11450 SM00382 ATPases associated with a variety of cellular activities BKP58_11455 SM00382 ATPases associated with a variety of cellular activities BKP58_11465 SM00662 RNA polymerases D BKP58_11485 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_11550 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BKP58_11555 SM01374 BKP58_11555 BKP58_11575 SM00322 K homology RNA-binding domain BKP58_11590 SM01382 BKP58_11590 BKP58_11590 SM01383 BKP58_11590 BKP58_11610 SM01403 BKP58_11610 BKP58_11625 SM00838 Elongation factor G C-terminus BKP58_11625 SM00889 Elongation factor G, domain IV BKP58_11645 SM00663 RNA polymerase I subunit A N-terminus BKP58_11675 SM00649 Ribosomal protein L11/L12 BKP58_11680 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BKP58_11680 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BKP58_11705 SM00967 RNA 2'-O ribose methyltransferase substrate binding BKP58_11710 SM00535 Ribonuclease III family BKP58_11715 SM00840 BKP58_11715 BKP58_11745 SM00670 Large family of predicted nucleotide-binding domains BKP58_11755 SM00382 ATPases associated with a variety of cellular activities BKP58_11760 SM00382 ATPases associated with a variety of cellular activities BKP58_11760 SM01086 C-terminal, D2-small domain, of ClpB protein BKP58_11865 SM00530 Helix-turn-helix XRE-family like proteins BKP58_11875 SM00905 Dihydroneopterin aldolase BKP58_11920 SM00382 ATPases associated with a variety of cellular activities BKP58_11930 SM00977 TilS substrate C-terminal domain BKP58_11935 SM00220 Serine/Threonine protein kinases, catalytic domain BKP58_11945 SM00331 Sigma factor PP2C-like phosphatases BKP58_11945 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BKP58_11960 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_11980 SM00363 S4 RNA-binding domain BKP58_11995 SM00966 SpoVT / AbrB like domain BKP58_12000 SM00487 DEAD-like helicases superfamily BKP58_12000 SM00490 helicase superfamily c-terminal domain BKP58_12000 SM00982 BKP58_12000 BKP58_12000 SM01058 CarD-like/TRCF domain BKP58_12020 SM01400 BKP58_12020 BKP58_12070 SM00650 Ribosomal RNA adenine dimethylases BKP58_12075 SM00493 BKP58_12075 BKP58_12080 SM01208 BKP58_12080 BKP58_12095 SM00966 SpoVT / AbrB like domain BKP58_12105 SM00465 GIY-YIG type nucleases (URI domain) BKP58_12200 SM00493 BKP58_12200 BKP58_12210 SM00382 ATPases associated with a variety of cellular activities BKP58_12230 SM00257 Lysin motif BKP58_12230 SM00636 BKP58_12230 BKP58_12265 SM00936 Penicillin-binding protein 5, C-terminal domain BKP58_12270 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_12270 SM01240 BKP58_12270 BKP58_12305 SM00434 DNA Topoisomerase IV BKP58_12310 SM00387 Histidine kinase-like ATPases BKP58_12310 SM00433 TopoisomeraseII BKP58_12330 SM00480 DNA polymerase III beta subunit BKP58_12335 SM00382 ATPases associated with a variety of cellular activities BKP58_12335 SM00760 Bacterial dnaA protein helix-turn-helix domain BKP58_12355 SM00322 K homology RNA-binding domain BKP58_12355 SM00393 Putative single-stranded nucleic acids-binding domain BKP58_12355 SM01245 BKP58_12355 BKP58_12365 SM01228 BKP58_12365 BKP58_12375 SM00470 ParB-like nuclease domain BKP58_12390 SM00470 ParB-like nuclease domain BKP58_12410 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKP58_12450 SM00382 ATPases associated with a variety of cellular activities BKP58_12480 SM00871 Bacterial transcription activator, effector binding domain BKP58_12515 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_12545 SM00422 helix_turn_helix, mercury resistance BKP58_12565 SM01131 BKP58_12565 BKP58_12590 SM00267 diguanylate cyclase BKP58_12630 SM00382 ATPases associated with a variety of cellular activities BKP58_12640 SM00788 Adenylosuccinate synthetase BKP58_12665 SM00448 cheY-homologous receiver domain BKP58_12665 SM00862 Transcriptional regulatory protein, C terminal BKP58_12670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKP58_12670 SM00091 PAS domain BKP58_12670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_12670 SM00387 Histidine kinase-like ATPases BKP58_12670 SM00388 His Kinase A (phosphoacceptor) domain BKP58_12685 SM00849 Metallo-beta-lactamase superfamily BKP58_12690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_12700 SM00091 PAS domain BKP58_12700 SM00382 ATPases associated with a variety of cellular activities BKP58_12705 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_12720 SM00752 Horizontally Transferred TransMembrane Domain BKP58_12805 SM00487 DEAD-like helicases superfamily BKP58_12805 SM00490 helicase superfamily c-terminal domain BKP58_12880 SM00382 ATPases associated with a variety of cellular activities BKP58_12910 SM00382 ATPases associated with a variety of cellular activities BKP58_12920 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_12920 SM00866 BKP58_12920 BKP58_12950 SM01350 BKP58_12950 BKP58_12965 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_12965 SM00895 BKP58_12965 BKP58_12990 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_13020 SM00382 ATPases associated with a variety of cellular activities BKP58_13050 SM00530 Helix-turn-helix XRE-family like proteins BKP58_13065 SM00387 Histidine kinase-like ATPases BKP58_13100 SM00420 helix_turn_helix, Deoxyribose operon repressor BKP58_13100 SM01134 BKP58_13100 BKP58_13160 SM00448 cheY-homologous receiver domain BKP58_13160 SM00862 Transcriptional regulatory protein, C terminal BKP58_13165 SM00387 Histidine kinase-like ATPases BKP58_13235 SM00062 Bacterial periplasmic substrate-binding proteins BKP58_13245 SM00382 ATPases associated with a variety of cellular activities BKP58_13275 SM01133 BKP58_13275 BKP58_13285 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BKP58_13315 SM00487 DEAD-like helicases superfamily BKP58_13315 SM00490 helicase superfamily c-terminal domain BKP58_13495 SM00487 DEAD-like helicases superfamily BKP58_13495 SM00490 helicase superfamily c-terminal domain BKP58_13510 SM01061 CAT RNA binding domain BKP58_13525 SM01060 BKP58_13525 BKP58_13560 SM00882 Coenzyme A transferase BKP58_13565 SM00882 Coenzyme A transferase BKP58_13605 SM00421 helix_turn_helix, Lux Regulon BKP58_13605 SM00448 cheY-homologous receiver domain BKP58_13645 SM00382 ATPases associated with a variety of cellular activities BKP58_13680 SM00382 ATPases associated with a variety of cellular activities BKP58_13685 SM00382 ATPases associated with a variety of cellular activities BKP58_13720 SM00382 ATPases associated with a variety of cellular activities BKP58_13735 SM01060 BKP58_13735 BKP58_13830 SM00954 Region found in RelA / SpoT proteins BKP58_13840 SM00363 S4 RNA-binding domain BKP58_13845 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_13860 SM01061 CAT RNA binding domain BKP58_13890 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BKP58_14060 SM00640 Glycosyl hydrolases family 32 BKP58_14080 SM00986 Uracil DNA glycosylase superfamily BKP58_14080 SM00987 UreE urease accessory protein, C-terminal domain BKP58_14135 SM00858 BKP58_14135 BKP58_14175 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BKP58_14270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_14295 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BKP58_14300 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_14350 SM00028 Tetratricopeptide repeats BKP58_14400 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_14415 SM00836 DALR anticodon binding domain BKP58_14415 SM01016 Arginyl tRNA synthetase N terminal dom BKP58_14425 SM00100 Cyclic nucleotide-monophosphate binding domain BKP58_14425 SM00419 helix_turn_helix, cAMP Regulatory protein BKP58_14440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKP58_14460 SM00155 Phospholipase D. Active site motifs. BKP58_14485 SM00155 Phospholipase D. Active site motifs. BKP58_14515 SM00448 cheY-homologous receiver domain BKP58_14545 SM00357 Cold shock protein domain BKP58_14545 SM00382 ATPases associated with a variety of cellular activities BKP58_14545 SM00959 Rho termination factor, N-terminal domain BKP58_14560 SM00919 Malic enzyme, NAD binding domain BKP58_14560 SM01274 BKP58_14560 BKP58_14580 SM00937 BKP58_14580 BKP58_14620 SM00226 Low molecular weight phosphatase family BKP58_14685 SM00382 ATPases associated with a variety of cellular activities BKP58_14720 SM00327 von Willebrand factor (vWF) type A domain BKP58_14730 SM00327 von Willebrand factor (vWF) type A domain BKP58_14745 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_14750 SM00028 Tetratricopeptide repeats BKP58_14800 SM00422 helix_turn_helix, mercury resistance BKP58_14805 SM00155 Phospholipase D. Active site motifs. BKP58_14840 SM00014 Acid phosphatase homologues BKP58_14845 SM00938 Nitrogen regulatory protein P-II BKP58_14875 SM00710 Parallel beta-helix repeats BKP58_14875 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BKP58_14885 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_14910 SM00028 Tetratricopeptide repeats BKP58_14925 SM00387 Histidine kinase-like ATPases BKP58_14955 SM00420 helix_turn_helix, Deoxyribose operon repressor BKP58_14955 SM01134 BKP58_14955 BKP58_14965 SM00487 DEAD-like helicases superfamily BKP58_14965 SM00490 helicase superfamily c-terminal domain BKP58_14995 SM00984 UDP binding domain BKP58_15070 SM00344 helix_turn_helix ASNC type BKP58_15085 SM00903 Flavin reductase like domain BKP58_15140 SM00287 Bacterial SH3 domain homologues BKP58_15155 SM00382 ATPases associated with a variety of cellular activities BKP58_15170 SM00354 helix_turn _helix lactose operon repressor BKP58_15185 SM00854 Bacterial capsule synthesis protein PGA_cap BKP58_15240 SM00047 Lysozyme subfamily 2 BKP58_15240 SM00287 Bacterial SH3 domain homologues BKP58_15285 SM00382 ATPases associated with a variety of cellular activities BKP58_15335 SM00646 BKP58_15335 BKP58_15360 SM00984 UDP binding domain BKP58_15395 SM00382 ATPases associated with a variety of cellular activities BKP58_15440 SM00387 Histidine kinase-like ATPases BKP58_15445 SM00421 helix_turn_helix, Lux Regulon BKP58_15445 SM00448 cheY-homologous receiver domain BKP58_15455 SM00487 DEAD-like helicases superfamily BKP58_15455 SM00490 helicase superfamily c-terminal domain BKP58_15545 SM00957 SecA DEAD-like domain BKP58_15545 SM00958 SecA preprotein cross-linking domain BKP58_15550 SM00937 BKP58_15550 BKP58_15565 SM00382 ATPases associated with a variety of cellular activities BKP58_15575 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_15575 SM00245 tail specific protease BKP58_15585 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_15610 SM00487 DEAD-like helicases superfamily BKP58_15610 SM00490 helicase superfamily c-terminal domain BKP58_15615 SM00382 ATPases associated with a variety of cellular activities BKP58_15665 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_15665 SM00866 BKP58_15665 BKP58_15780 SM00382 ATPases associated with a variety of cellular activities BKP58_15785 SM00028 Tetratricopeptide repeats BKP58_15835 SM00448 cheY-homologous receiver domain BKP58_15835 SM00862 Transcriptional regulatory protein, C terminal BKP58_15840 SM00387 Histidine kinase-like ATPases BKP58_15845 SM00382 ATPases associated with a variety of cellular activities BKP58_15860 SM00947 Carbonic anhydrase BKP58_15880 SM00354 helix_turn _helix lactose operon repressor BKP58_15885 SM00642 Alpha-amylase domain BKP58_15915 SM00642 Alpha-amylase domain BKP58_15960 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16115 SM00047 Lysozyme subfamily 2 BKP58_16150 SM00257 Lysin motif BKP58_16150 SM00644 BKP58_16150 BKP58_16210 SM00640 Glycosyl hydrolases family 32 BKP58_16250 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16345 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_16345 SM00895 BKP58_16345 BKP58_16350 SM00354 helix_turn _helix lactose operon repressor BKP58_16380 SM00331 Sigma factor PP2C-like phosphatases BKP58_16390 SM01022 BKP58_16390 BKP58_16405 SM00382 ATPases associated with a variety of cellular activities BKP58_16420 SM00421 helix_turn_helix, Lux Regulon BKP58_16420 SM00448 cheY-homologous receiver domain BKP58_16465 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_16480 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BKP58_16505 SM01192 BKP58_16505 BKP58_16505 SM01193 BKP58_16505 BKP58_16540 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_16540 SM00382 ATPases associated with a variety of cellular activities BKP58_16565 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_16565 SM00382 ATPases associated with a variety of cellular activities BKP58_16585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKP58_16585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_16595 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16600 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16605 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16625 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_16625 SM00357 Cold shock protein domain BKP58_16625 SM00955 BKP58_16625 BKP58_16650 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16655 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16660 SM00530 Helix-turn-helix XRE-family like proteins BKP58_16850 SM00047 Lysozyme subfamily 2 BKP58_16875 SM00257 Lysin motif BKP58_16875 SM00644 BKP58_16875 BKP58_17060 SM00382 ATPases associated with a variety of cellular activities BKP58_17070 SM00382 ATPases associated with a variety of cellular activities BKP58_17085 SM00835 Cupin BKP58_17105 SM00448 cheY-homologous receiver domain BKP58_17105 SM00862 Transcriptional regulatory protein, C terminal BKP58_17110 SM00387 Histidine kinase-like ATPases BKP58_17110 SM00388 His Kinase A (phosphoacceptor) domain BKP58_17135 SM00382 ATPases associated with a variety of cellular activities BKP58_17170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_17170 SM00387 Histidine kinase-like ATPases BKP58_17175 SM00421 helix_turn_helix, Lux Regulon BKP58_17175 SM00448 cheY-homologous receiver domain BKP58_17215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_17215 SM00387 Histidine kinase-like ATPases BKP58_17215 SM00388 His Kinase A (phosphoacceptor) domain BKP58_17220 SM00448 cheY-homologous receiver domain BKP58_17220 SM00862 Transcriptional regulatory protein, C terminal BKP58_17225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_17280 SM00382 ATPases associated with a variety of cellular activities BKP58_17300 SM00382 ATPases associated with a variety of cellular activities BKP58_17330 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_17385 SM00493 BKP58_17385 BKP58_17400 SM00382 ATPases associated with a variety of cellular activities BKP58_17400 SM00930 BKP58_17400 BKP58_17425 SM00382 ATPases associated with a variety of cellular activities BKP58_17450 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BKP58_17475 SM00465 GIY-YIG type nucleases (URI domain) BKP58_17505 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_17505 SM00866 BKP58_17505 BKP58_17510 SM00382 ATPases associated with a variety of cellular activities BKP58_17550 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BKP58_17630 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_17750 SM00530 Helix-turn-helix XRE-family like proteins BKP58_17775 SM00530 Helix-turn-helix XRE-family like proteins BKP58_17840 SM01240 BKP58_17840 BKP58_17925 SM00823 Phosphopantetheine attachment site BKP58_17925 SM00824 Thioesterase BKP58_17930 SM00923 MbtH-like protein BKP58_17940 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BKP58_17940 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BKP58_17985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_18030 SM00052 Putative diguanylate phosphodiesterase BKP58_18055 SM00387 Histidine kinase-like ATPases BKP58_18060 SM00421 helix_turn_helix, Lux Regulon BKP58_18060 SM00448 cheY-homologous receiver domain BKP58_18125 SM00382 ATPases associated with a variety of cellular activities BKP58_18135 SM00448 cheY-homologous receiver domain BKP58_18140 SM00091 PAS domain BKP58_18140 SM00387 Histidine kinase-like ATPases BKP58_18170 SM00479 BKP58_18170 BKP58_18175 SM01298 BKP58_18175 BKP58_18180 SM00387 Histidine kinase-like ATPases BKP58_18180 SM00388 His Kinase A (phosphoacceptor) domain BKP58_18200 SM00344 helix_turn_helix ASNC type BKP58_18210 SM00316 Ribosomal protein S1-like RNA-binding domain BKP58_18265 SM01091 Transporter associated domain BKP58_18270 SM00642 Alpha-amylase domain BKP58_18290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKP58_18290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_18290 SM00319 Homologues of the ligand binding domain of Tar BKP58_18300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BKP58_18300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BKP58_18300 SM00319 Homologues of the ligand binding domain of Tar BKP58_18315 SM01007 Class II Aldolase and Adducin N-terminal domain BKP58_18320 SM00420 helix_turn_helix, Deoxyribose operon repressor BKP58_18320 SM01134 BKP58_18320 BKP58_18370 SM00047 Lysozyme subfamily 2 BKP58_18425 SM00244 prohibitin homologues BKP58_18565 SM00642 Alpha-amylase domain BKP58_18625 SM00984 UDP binding domain BKP58_18665 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BKP58_18675 SM00382 ATPases associated with a variety of cellular activities BKP58_18710 SM00947 Carbonic anhydrase BKP58_18715 SM01234 BKP58_18715 BKP58_18755 SM00382 ATPases associated with a variety of cellular activities BKP58_18815 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_18830 SM00345 helix_turn_helix gluconate operon transcriptional repressor BKP58_18835 SM00382 ATPases associated with a variety of cellular activities BKP58_18850 SM00382 ATPases associated with a variety of cellular activities BKP58_18860 SM00448 cheY-homologous receiver domain BKP58_18860 SM00862 Transcriptional regulatory protein, C terminal BKP58_18865 SM00387 Histidine kinase-like ATPases BKP58_18870 SM00382 ATPases associated with a variety of cellular activities BKP58_18890 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BKP58_18890 SM00091 PAS domain BKP58_18905 SM00450 Rhodanese Homology Domain BKP58_18930 SM00354 helix_turn _helix lactose operon repressor BKP58_18960 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_18960 SM00876 Biotin and Thiamin Synthesis associated domain BKP58_19035 SM00363 S4 RNA-binding domain BKP58_19040 SM00420 helix_turn_helix, Deoxyribose operon repressor BKP58_19045 SM00382 ATPases associated with a variety of cellular activities BKP58_19080 SM00046 Diacylglycerol kinase catalytic domain (presumed) BKP58_19085 SM00642 Alpha-amylase domain BKP58_19105 SM00849 Metallo-beta-lactamase superfamily BKP58_19110 SM00919 Malic enzyme, NAD binding domain BKP58_19110 SM01274 BKP58_19110 BKP58_19145 SM00382 ATPases associated with a variety of cellular activities BKP58_19145 SM00843 BKP58_19145 BKP58_19170 SM00830 Chorismate mutase type II BKP58_19175 SM00354 helix_turn _helix lactose operon repressor BKP58_19195 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_19210 SM00363 S4 RNA-binding domain BKP58_19220 SM00363 S4 RNA-binding domain BKP58_19220 SM01390 BKP58_19220 BKP58_19225 SM00267 diguanylate cyclase BKP58_19230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKP58_19260 SM00981 BKP58_19260 BKP58_19320 SM00852 Probable molybdopterin binding domain BKP58_19345 SM00849 Metallo-beta-lactamase superfamily BKP58_19355 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_19385 SM00481 DNA polymerase alpha chain like domain BKP58_19390 SM00919 Malic enzyme, NAD binding domain BKP58_19390 SM01274 BKP58_19390 BKP58_19435 SM01329 BKP58_19435 BKP58_19445 SM00448 cheY-homologous receiver domain BKP58_19445 SM00862 Transcriptional regulatory protein, C terminal BKP58_19450 SM00091 PAS domain BKP58_19450 SM00387 Histidine kinase-like ATPases BKP58_19450 SM00388 His Kinase A (phosphoacceptor) domain BKP58_19455 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BKP58_19455 SM00474 3'-5' exonuclease BKP58_19455 SM00475 5'-3' exonuclease BKP58_19455 SM00482 DNA polymerase A domain BKP58_19460 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BKP58_19460 SM01232 BKP58_19460 BKP58_19495 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BKP58_19515 SM00382 ATPases associated with a variety of cellular activities BKP58_19530 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BKP58_19540 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BKP58_19540 SM00387 Histidine kinase-like ATPases BKP58_19545 SM00448 cheY-homologous receiver domain BKP58_19545 SM00850 LytTr DNA-binding domain BKP58_19610 SM01007 Class II Aldolase and Adducin N-terminal domain BKP58_19640 SM00813 Alpha-L-arabinofuranosidase C-terminus BKP58_19675 SM00967 RNA 2'-O ribose methyltransferase substrate binding BKP58_19690 SM00873 B3/4 domain BKP58_19690 SM00874 tRNA synthetase B5 domain BKP58_19690 SM00896 Ferredoxin-fold anticodon binding domain BKP58_19710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BKP58_19710 SM00481 DNA polymerase alpha chain like domain BKP58_19710 SM00483 DNA polymerase X family BKP58_19715 SM00463 Small MutS-related domain BKP58_19715 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BKP58_19715 SM00534 ATPase domain of DNA mismatch repair MUTS family BKP58_19740 SM00893 Electron transfer flavoprotein domain BKP58_19745 SM00893 Electron transfer flavoprotein domain BKP58_19750 SM00813 Alpha-L-arabinofuranosidase C-terminus BKP58_19760 SM00465 GIY-YIG type nucleases (URI domain) BKP58_19800 SM00421 helix_turn_helix, Lux Regulon BKP58_19805 SM00347 helix_turn_helix multiple antibiotic resistance protein BKP58_19815 SM00909 Sporulation and spore germination BKP58_19855 SM00487 DEAD-like helicases superfamily BKP58_19855 SM00490 helicase superfamily c-terminal domain BKP58_19925 SM00917 LeuA allosteric (dimerisation) domain BKP58_19930 SM01329 BKP58_19930 BKP58_19955 SM00382 ATPases associated with a variety of cellular activities BKP58_19955 SM00994 ClpX C4-type zinc finger BKP58_19955 SM01086 C-terminal, D2-small domain, of ClpB protein BKP58_19960 SM00382 ATPases associated with a variety of cellular activities BKP58_19965 SM00382 ATPases associated with a variety of cellular activities BKP58_19965 SM00464 Found in ATP-dependent protease La (LON) BKP58_20000 SM01004 Delta-aminolevulinic acid dehydratase BKP58_20010 SM00257 Lysin motif BKP58_20110 SM01317 BKP58_20110 BKP58_20155 SM00257 Lysin motif BKP58_20210 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BKP58_20215 SM00382 ATPases associated with a variety of cellular activities BKP58_20235 SM01323 BKP58_20235 BKP58_20285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_20285 SM00954 Region found in RelA / SpoT proteins BKP58_20295 SM00287 Bacterial SH3 domain homologues BKP58_20295 SM00646 BKP58_20295 BKP58_20325 SM00382 ATPases associated with a variety of cellular activities BKP58_20345 SM00028 Tetratricopeptide repeats BKP58_20350 SM00382 ATPases associated with a variety of cellular activities BKP58_20380 SM00062 Bacterial periplasmic substrate-binding proteins BKP58_20380 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BKP58_20385 SM00382 ATPases associated with a variety of cellular activities BKP58_20395 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BKP58_20405 SM00732 Likely ribonuclease with RNase H fold. BKP58_20460 SM00650 Ribosomal RNA adenine dimethylases BKP58_20495 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BKP58_20495 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKP58_20565 SM00382 ATPases associated with a variety of cellular activities BKP58_20590 SM00640 Glycosyl hydrolases family 32 BKP58_20600 SM00829 Enoylreductase BKP58_20610 SM00422 helix_turn_helix, mercury resistance BKP58_20650 SM00287 Bacterial SH3 domain homologues BKP58_20745 SM00344 helix_turn_helix ASNC type BKP58_20795 SM01091 Transporter associated domain BKP58_20810 SM00422 helix_turn_helix, mercury resistance BKP58_20855 SM00382 ATPases associated with a variety of cellular activities BKP58_20895 SM00860 SMI1 / KNR4 family BKP58_20900 SM00860 SMI1 / KNR4 family BKP58_20920 SM00028 Tetratricopeptide repeats BKP58_20965 SM01350 BKP58_20965 BKP58_20975 SM00644 BKP58_20975 BKP58_21010 SM01103 BKP58_21010 BKP58_21020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_21040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BKP58_21050 SM00849 Metallo-beta-lactamase superfamily BKP58_21085 SM00838 Elongation factor G C-terminus BKP58_21090 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_21110 SM00271 DnaJ molecular chaperone homology domain BKP58_21125 SM00729 Elongator protein 3, MiaB family, Radical SAM BKP58_21180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BKP58_21225 SM00116 Domain in cystathionine beta-synthase and other proteins. BKP58_21240 SM00400 zinc finger BKP58_21240 SM00493 BKP58_21240 BKP58_21275 SM00487 DEAD-like helicases superfamily BKP58_21275 SM00490 helicase superfamily c-terminal domain BKP58_21280 SM00518 AP endonuclease family 2 BKP58_21315 SM00257 Lysin motif BKP58_21360 SM00382 ATPases associated with a variety of cellular activities BKP58_21365 SM00382 ATPases associated with a variety of cellular activities BKP58_21405 SM00028 Tetratricopeptide repeats BKP58_21425 SM00631 BKP58_21425 BKP58_21445 SM00849 Metallo-beta-lactamase superfamily BKP58_21470 SM01091 Transporter associated domain BKP58_21490 SM00382 ATPases associated with a variety of cellular activities BKP58_21550 SM00530 Helix-turn-helix XRE-family like proteins BKP58_21565 SM00487 DEAD-like helicases superfamily BKP58_21565 SM00490 helicase superfamily c-terminal domain BKP58_21585 SM00450 Rhodanese Homology Domain BKP58_21595 SM00529 Helix-turn-helix diphteria tox regulatory element BKP58_21630 SM00841 Elongation factor P, C-terminal BKP58_21630 SM01185 BKP58_21630 BKP58_21640 SM00382 ATPases associated with a variety of cellular activities BKP58_21695 SM00878 Biotin carboxylase C-terminal domain BKP58_21730 SM00861 Transketolase, pyrimidine binding domain BKP58_21735 SM00363 S4 RNA-binding domain BKP58_21750 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BKP58_21760 SM00448 cheY-homologous receiver domain BKP58_21785 SM00646 BKP58_21785 BKP58_21830 SM00091 PAS domain BKP58_21830 SM00382 ATPases associated with a variety of cellular activities BKP58_21840 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BKP58_21860 SM00861 Transketolase, pyrimidine binding domain BKP58_21870 SM00422 helix_turn_helix, mercury resistance BKP58_21880 SM00046 Diacylglycerol kinase catalytic domain (presumed) BKP58_21890 SM00062 Bacterial periplasmic substrate-binding proteins BKP58_21890 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BKP58_21900 SM00382 ATPases associated with a variety of cellular activities BKP58_21955 SM01350 BKP58_21955 BKP58_21965 SM00849 Metallo-beta-lactamase superfamily BKP58_22000 SM00849 Metallo-beta-lactamase superfamily BKP58_22155 SM00318 Staphylococcal nuclease homologues BKP58_22320 SM00530 Helix-turn-helix XRE-family like proteins