KS07_00005 SM00382 ATPases associated with a variety of cellular activities KS07_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain KS07_00010 SM00480 DNA polymerase III beta subunit KS07_00030 SM00387 Histidine kinase-like ATPases KS07_00030 SM00433 TopoisomeraseII KS07_00035 SM00434 DNA Topoisomerase IV KS07_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_00070 SM01240 KS07_00070 KS07_00075 SM00936 Penicillin-binding protein 5, C-terminal domain KS07_00115 SM00257 Lysin motif KS07_00115 SM00636 KS07_00115 KS07_00130 SM00382 ATPases associated with a variety of cellular activities KS07_00140 SM00493 KS07_00140 KS07_00235 SM00465 GIY-YIG type nucleases (URI domain) KS07_00245 SM00966 SpoVT / AbrB like domain KS07_00260 SM01208 KS07_00260 KS07_00265 SM00493 KS07_00265 KS07_00270 SM00650 Ribosomal RNA adenine dimethylases KS07_00315 SM01400 KS07_00315 KS07_00335 SM00487 DEAD-like helicases superfamily KS07_00335 SM00490 helicase superfamily c-terminal domain KS07_00335 SM00982 KS07_00335 KS07_00335 SM01058 CarD-like/TRCF domain KS07_00340 SM00966 SpoVT / AbrB like domain KS07_00355 SM00363 S4 RNA-binding domain KS07_00375 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_00390 SM00331 Sigma factor PP2C-like phosphatases KS07_00390 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KS07_00400 SM00220 Serine/Threonine protein kinases, catalytic domain KS07_00405 SM00977 TilS substrate C-terminal domain KS07_00415 SM00382 ATPases associated with a variety of cellular activities KS07_00460 SM00905 Dihydroneopterin aldolase KS07_00470 SM00530 Helix-turn-helix XRE-family like proteins KS07_00520 SM00382 ATPases associated with a variety of cellular activities KS07_00520 SM01086 C-terminal, D2-small domain, of ClpB protein KS07_00525 SM00382 ATPases associated with a variety of cellular activities KS07_00535 SM00670 Large family of predicted nucleotide-binding domains KS07_00565 SM00840 KS07_00565 KS07_00570 SM00535 Ribonuclease III family KS07_00575 SM00967 RNA 2'-O ribose methyltransferase substrate binding KS07_00600 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KS07_00600 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KS07_00605 SM00649 Ribosomal protein L11/L12 KS07_00635 SM00663 RNA polymerase I subunit A N-terminus KS07_00655 SM00838 Elongation factor G C-terminus KS07_00655 SM00889 Elongation factor G, domain IV KS07_00670 SM01403 KS07_00670 KS07_00690 SM01382 KS07_00690 KS07_00690 SM01383 KS07_00690 KS07_00705 SM00322 K homology RNA-binding domain KS07_00725 SM01374 KS07_00725 KS07_00730 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KS07_00795 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_00815 SM00662 RNA polymerases D KS07_00825 SM00382 ATPases associated with a variety of cellular activities KS07_00830 SM00382 ATPases associated with a variety of cellular activities KS07_00870 SM00646 KS07_00870 KS07_00885 SM01251 KS07_00885 KS07_00925 SM00829 Enoylreductase KS07_00960 SM00342 helix_turn_helix, arabinose operon control protein KS07_01055 SM00382 ATPases associated with a variety of cellular activities KS07_01070 SM00448 cheY-homologous receiver domain KS07_01070 SM00862 Transcriptional regulatory protein, C terminal KS07_01075 SM00387 Histidine kinase-like ATPases KS07_01080 SM00382 ATPases associated with a variety of cellular activities KS07_01115 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_01135 SM00421 helix_turn_helix, Lux Regulon KS07_01135 SM00448 cheY-homologous receiver domain KS07_01140 SM00382 ATPases associated with a variety of cellular activities KS07_01235 SM00530 Helix-turn-helix XRE-family like proteins KS07_01270 SM00450 Rhodanese Homology Domain KS07_01305 SM00387 Histidine kinase-like ATPases KS07_01310 SM00448 cheY-homologous receiver domain KS07_01440 SM00028 Tetratricopeptide repeats KS07_01450 SM00642 Alpha-amylase domain KS07_01460 SM00382 ATPases associated with a variety of cellular activities KS07_01510 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_01510 SM00382 ATPases associated with a variety of cellular activities KS07_01540 SM00632 KS07_01540 KS07_01540 SM00642 Alpha-amylase domain KS07_01555 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_01660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KS07_01675 SM00833 Cobalamin synthesis protein cobW C-terminal domain KS07_01710 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KS07_01730 SM00823 Phosphopantetheine attachment site KS07_01735 SM00823 Phosphopantetheine attachment site KS07_01760 SM00382 ATPases associated with a variety of cellular activities KS07_01770 SM00062 Bacterial periplasmic substrate-binding proteins KS07_01805 SM00710 Parallel beta-helix repeats KS07_01805 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses KS07_01840 SM00062 Bacterial periplasmic substrate-binding proteins KS07_01850 SM00382 ATPases associated with a variety of cellular activities KS07_01865 SM00382 ATPases associated with a variety of cellular activities KS07_01875 SM00448 cheY-homologous receiver domain KS07_01875 SM00862 Transcriptional regulatory protein, C terminal KS07_01880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_01880 SM00387 Histidine kinase-like ATPases KS07_01880 SM00388 His Kinase A (phosphoacceptor) domain KS07_01885 SM00028 Tetratricopeptide repeats KS07_01915 SM00382 ATPases associated with a variety of cellular activities KS07_01945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KS07_01950 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_01985 SM00420 helix_turn_helix, Deoxyribose operon repressor KS07_02040 SM00796 Allophanate hydrolase subunit 1 KS07_02045 SM00797 Allophanate hydrolase subunit 2 KS07_02050 SM00346 helix_turn_helix isocitrate lyase regulation KS07_02120 SM00344 helix_turn_helix ASNC type KS07_02125 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KS07_02125 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KS07_02125 SM00493 KS07_02125 KS07_02135 SM00267 diguanylate cyclase KS07_02255 SM00091 PAS domain KS07_02255 SM00387 Histidine kinase-like ATPases KS07_02260 SM00448 cheY-homologous receiver domain KS07_02275 SM00382 ATPases associated with a variety of cellular activities KS07_02325 SM00487 DEAD-like helicases superfamily KS07_02325 SM00490 helicase superfamily c-terminal domain KS07_02355 SM01005 Alanine racemase, C-terminal domain KS07_02380 SM00387 Histidine kinase-like ATPases KS07_02385 SM00331 Sigma factor PP2C-like phosphatases KS07_02405 SM00331 Sigma factor PP2C-like phosphatases KS07_02405 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KS07_02410 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_02410 SM00732 Likely ribonuclease with RNase H fold. KS07_02420 SM00731 SprT homologues. KS07_02465 SM00860 SMI1 / KNR4 family KS07_02535 SM00357 Cold shock protein domain KS07_02540 SM01058 CarD-like/TRCF domain KS07_02555 SM00450 Rhodanese Homology Domain KS07_02560 SM00450 Rhodanese Homology Domain KS07_02565 SM00450 Rhodanese Homology Domain KS07_02565 SM00849 Metallo-beta-lactamase superfamily KS07_02655 SM00829 Enoylreductase KS07_02660 SM00422 helix_turn_helix, mercury resistance KS07_02670 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_02720 SM00387 Histidine kinase-like ATPases KS07_02725 SM00421 helix_turn_helix, Lux Regulon KS07_02725 SM00448 cheY-homologous receiver domain KS07_02740 SM00382 ATPases associated with a variety of cellular activities KS07_02765 SM00825 Beta-ketoacyl synthase KS07_02770 SM00530 Helix-turn-helix XRE-family like proteins KS07_02795 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_02795 SM00895 KS07_02795 KS07_02830 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_02830 SM00866 KS07_02830 KS07_02835 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_02835 SM00895 KS07_02835 KS07_02875 SM00829 Enoylreductase KS07_02945 SM00382 ATPases associated with a variety of cellular activities KS07_02955 SM00881 CoA binding domain KS07_02980 SM00883 Chaperonin 10 Kd subunit KS07_03015 SM00487 DEAD-like helicases superfamily KS07_03020 SM00028 Tetratricopeptide repeats KS07_03020 SM00382 ATPases associated with a variety of cellular activities KS07_03025 SM00829 Enoylreductase KS07_03080 SM00829 Enoylreductase KS07_03125 SM00460 Transglutaminase/protease-like homologues KS07_03170 SM01001 AIR carboxylase KS07_03180 SM00998 Adenylosuccinate lyase C-terminus KS07_03195 SM01211 KS07_03195 KS07_03220 SM00798 AICARFT/IMPCHase bienzyme KS07_03220 SM00851 MGS-like domain KS07_03225 SM01209 KS07_03225 KS07_03225 SM01210 KS07_03225 KS07_03270 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KS07_03270 SM00292 breast cancer carboxy-terminal domain KS07_03270 SM00532 Ligase N family KS07_03305 SM00845 GatB domain KS07_03320 SM00046 Diacylglycerol kinase catalytic domain (presumed) KS07_03330 SM00448 cheY-homologous receiver domain KS07_03330 SM00862 Transcriptional regulatory protein, C terminal KS07_03335 SM00382 ATPases associated with a variety of cellular activities KS07_03345 SM00387 Histidine kinase-like ATPases KS07_03345 SM00388 His Kinase A (phosphoacceptor) domain KS07_03370 SM00825 Beta-ketoacyl synthase KS07_03370 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_03375 SM00382 ATPases associated with a variety of cellular activities KS07_03390 SM00825 Beta-ketoacyl synthase KS07_03395 SM00822 KS07_03395 KS07_03400 SM00822 KS07_03400 KS07_03400 SM00823 Phosphopantetheine attachment site KS07_03400 SM00825 Beta-ketoacyl synthase KS07_03405 SM00822 KS07_03405 KS07_03415 SM00822 KS07_03415 KS07_03415 SM00823 Phosphopantetheine attachment site KS07_03415 SM00825 Beta-ketoacyl synthase KS07_03415 SM01294 KS07_03415 KS07_03420 SM00825 Beta-ketoacyl synthase KS07_03430 SM00823 Phosphopantetheine attachment site KS07_03430 SM00825 Beta-ketoacyl synthase KS07_03430 SM01294 KS07_03430 KS07_03435 SM00822 KS07_03435 KS07_03435 SM00823 Phosphopantetheine attachment site KS07_03435 SM00825 Beta-ketoacyl synthase KS07_03435 SM00826 KS07_03435 KS07_03445 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_03535 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_03600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_03615 SM00382 ATPases associated with a variety of cellular activities KS07_03620 SM00422 helix_turn_helix, mercury resistance KS07_03630 SM00382 ATPases associated with a variety of cellular activities KS07_03635 SM00487 DEAD-like helicases superfamily KS07_03635 SM00490 helicase superfamily c-terminal domain KS07_03645 SM00829 Enoylreductase KS07_03660 SM00656 KS07_03660 KS07_03690 SM00387 Histidine kinase-like ATPases KS07_03690 SM00388 His Kinase A (phosphoacceptor) domain KS07_03690 SM00448 cheY-homologous receiver domain KS07_03695 SM00448 cheY-homologous receiver domain KS07_03695 SM00862 Transcriptional regulatory protein, C terminal KS07_03710 SM00091 PAS domain KS07_03710 SM00387 Histidine kinase-like ATPases KS07_03715 SM00448 cheY-homologous receiver domain KS07_03730 SM00849 Metallo-beta-lactamase superfamily KS07_03810 SM00642 Alpha-amylase domain KS07_03815 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_03815 SM00866 KS07_03815 KS07_03845 SM00354 helix_turn _helix lactose operon repressor KS07_03870 SM00226 Low molecular weight phosphatase family KS07_03925 SM00382 ATPases associated with a variety of cellular activities KS07_03935 SM00014 Acid phosphatase homologues KS07_03940 SM00448 cheY-homologous receiver domain KS07_03940 SM00862 Transcriptional regulatory protein, C terminal KS07_03945 SM00387 Histidine kinase-like ATPases KS07_03945 SM00388 His Kinase A (phosphoacceptor) domain KS07_03965 SM00478 endonuclease III KS07_03995 SM00861 Transketolase, pyrimidine binding domain KS07_04010 SM00382 ATPases associated with a variety of cellular activities KS07_04040 SM00382 ATPases associated with a variety of cellular activities KS07_04045 SM00382 ATPases associated with a variety of cellular activities KS07_04100 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_04170 SM00287 Bacterial SH3 domain homologues KS07_04200 SM00478 endonuclease III KS07_04200 SM00525 KS07_04200 KS07_04230 SM00382 ATPases associated with a variety of cellular activities KS07_04400 SM00382 ATPases associated with a variety of cellular activities KS07_04405 SM00382 ATPases associated with a variety of cellular activities KS07_04410 SM01060 KS07_04410 KS07_04420 SM00382 ATPases associated with a variety of cellular activities KS07_04425 SM00062 Bacterial periplasmic substrate-binding proteins KS07_04450 SM00530 Helix-turn-helix XRE-family like proteins KS07_04465 SM00567 E-Z type HEAT repeats KS07_04495 SM00763 PrkA AAA domain KS07_04505 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_04535 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_04540 SM00382 ATPases associated with a variety of cellular activities KS07_04545 SM00382 ATPases associated with a variety of cellular activities KS07_04555 SM00357 Cold shock protein domain KS07_04565 SM00267 diguanylate cyclase KS07_04615 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_04660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KS07_04660 SM00387 Histidine kinase-like ATPases KS07_04665 SM00421 helix_turn_helix, Lux Regulon KS07_04665 SM00448 cheY-homologous receiver domain KS07_04685 SM00257 Lysin motif KS07_04705 SM00098 Alkaline phosphatase homologues KS07_04710 SM00257 Lysin motif KS07_04755 SM00563 Phosphate acyltransferases KS07_04760 SM01091 Transporter associated domain KS07_04765 SM00422 helix_turn_helix, mercury resistance KS07_04775 SM00825 Beta-ketoacyl synthase KS07_04780 SM01091 Transporter associated domain KS07_04840 SM00382 ATPases associated with a variety of cellular activities KS07_04845 SM00382 ATPases associated with a variety of cellular activities KS07_04895 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_04930 SM00382 ATPases associated with a variety of cellular activities KS07_04950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_04990 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_05020 SM00382 ATPases associated with a variety of cellular activities KS07_05105 SM00849 Metallo-beta-lactamase superfamily KS07_05150 SM00855 Phosphoglycerate mutase family KS07_05170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_05185 SM00914 KS07_05185 KS07_05215 SM00894 Excalibur calcium-binding domain KS07_05255 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_05380 SM00342 helix_turn_helix, arabinose operon control protein KS07_05400 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_05425 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_05435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_05435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_05500 SM00859 Semialdehyde dehydrogenase, NAD binding domain KS07_05520 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KS07_05525 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KS07_05580 SM00825 Beta-ketoacyl synthase KS07_05590 SM00382 ATPases associated with a variety of cellular activities KS07_05595 SM00382 ATPases associated with a variety of cellular activities KS07_05640 SM00382 ATPases associated with a variety of cellular activities KS07_05645 SM00382 ATPases associated with a variety of cellular activities KS07_05710 SM01118 KS07_05710 KS07_05720 SM00954 Region found in RelA / SpoT proteins KS07_05850 SM00849 Metallo-beta-lactamase superfamily KS07_05940 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_05980 SM00420 helix_turn_helix, Deoxyribose operon repressor KS07_05980 SM01134 KS07_05980 KS07_05990 SM00612 KS07_05990 KS07_06025 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KS07_06025 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KS07_06060 SM00382 ATPases associated with a variety of cellular activities KS07_06095 SM00354 helix_turn _helix lactose operon repressor KS07_06105 SM00858 KS07_06105 KS07_06130 SM00257 Lysin motif KS07_06130 SM00644 KS07_06130 KS07_06150 SM00530 Helix-turn-helix XRE-family like proteins KS07_06165 SM00382 ATPases associated with a variety of cellular activities KS07_06225 SM00257 Lysin motif KS07_06225 SM00644 KS07_06225 KS07_06270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_06295 SM00382 ATPases associated with a variety of cellular activities KS07_06310 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KS07_06320 SM00382 ATPases associated with a variety of cellular activities KS07_06360 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KS07_06375 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_06395 SM00028 Tetratricopeptide repeats KS07_06410 SM00100 Cyclic nucleotide-monophosphate binding domain KS07_06435 SM00382 ATPases associated with a variety of cellular activities KS07_06445 SM00257 Lysin motif KS07_06445 SM00636 KS07_06445 KS07_06460 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_06460 SM00924 MgtE intracellular N domain KS07_06465 SM00422 helix_turn_helix, mercury resistance KS07_06480 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_06495 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen KS07_06565 SM00091 PAS domain KS07_06565 SM00387 Histidine kinase-like ATPases KS07_06565 SM00388 His Kinase A (phosphoacceptor) domain KS07_06605 SM01007 Class II Aldolase and Adducin N-terminal domain KS07_06620 SM00387 Histidine kinase-like ATPases KS07_06620 SM00388 His Kinase A (phosphoacceptor) domain KS07_06625 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_06640 SM00382 ATPases associated with a variety of cellular activities KS07_06640 SM01086 C-terminal, D2-small domain, of ClpB protein KS07_06690 SM00822 KS07_06690 KS07_06740 SM00354 helix_turn _helix lactose operon repressor KS07_06745 SM01061 CAT RNA binding domain KS07_06775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_06775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_06795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KS07_06795 SM00091 PAS domain KS07_06795 SM00387 Histidine kinase-like ATPases KS07_06795 SM00388 His Kinase A (phosphoacceptor) domain KS07_06810 SM00260 Two component signalling adaptor domain KS07_06810 SM00448 cheY-homologous receiver domain KS07_06825 SM00257 Lysin motif KS07_06845 SM00052 Putative diguanylate phosphodiesterase KS07_06935 SM00852 Probable molybdopterin binding domain KS07_06965 SM00382 ATPases associated with a variety of cellular activities KS07_06975 SM00420 helix_turn_helix, Deoxyribose operon repressor KS07_06975 SM01134 KS07_06975 KS07_07000 SM00382 ATPases associated with a variety of cellular activities KS07_07025 SM00966 SpoVT / AbrB like domain KS07_07030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KS07_07030 SM00091 PAS domain KS07_07030 SM00387 Histidine kinase-like ATPases KS07_07030 SM00388 His Kinase A (phosphoacceptor) domain KS07_07050 SM00849 Metallo-beta-lactamase superfamily KS07_07085 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_07090 SM00822 KS07_07090 KS07_07090 SM00823 Phosphopantetheine attachment site KS07_07090 SM00825 Beta-ketoacyl synthase KS07_07090 SM00826 KS07_07090 KS07_07090 SM01294 KS07_07090 KS07_07095 SM00822 KS07_07095 KS07_07095 SM00823 Phosphopantetheine attachment site KS07_07095 SM00825 Beta-ketoacyl synthase KS07_07095 SM00826 KS07_07095 KS07_07100 SM00822 KS07_07100 KS07_07100 SM00823 Phosphopantetheine attachment site KS07_07100 SM00825 Beta-ketoacyl synthase KS07_07100 SM01294 KS07_07100 KS07_07105 SM00822 KS07_07105 KS07_07105 SM00823 Phosphopantetheine attachment site KS07_07105 SM00825 Beta-ketoacyl synthase KS07_07105 SM01294 KS07_07105 KS07_07110 SM00822 KS07_07110 KS07_07110 SM00823 Phosphopantetheine attachment site KS07_07110 SM00825 Beta-ketoacyl synthase KS07_07110 SM01294 KS07_07110 KS07_07115 SM00822 KS07_07115 KS07_07115 SM00823 Phosphopantetheine attachment site KS07_07115 SM00825 Beta-ketoacyl synthase KS07_07115 SM01294 KS07_07115 KS07_07120 SM00822 KS07_07120 KS07_07120 SM00823 Phosphopantetheine attachment site KS07_07120 SM01294 KS07_07120 KS07_07135 SM00861 Transketolase, pyrimidine binding domain KS07_07210 SM00838 Elongation factor G C-terminus KS07_07230 SM00670 Large family of predicted nucleotide-binding domains KS07_07255 SM00878 Biotin carboxylase C-terminal domain KS07_07300 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_07405 SM00740 KS07_07405 KS07_07410 SM00740 KS07_07410 KS07_07455 SM00842 Cell division protein FtsA KS07_07460 SM00864 Tubulin/FtsZ family, GTPase domain KS07_07460 SM00865 Tubulin/FtsZ family, C-terminal domain KS07_07485 SM00382 ATPases associated with a variety of cellular activities KS07_07520 SM00363 S4 RNA-binding domain KS07_07550 SM00363 S4 RNA-binding domain KS07_07575 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KS07_07580 SM00851 MGS-like domain KS07_07580 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KS07_07580 SM01209 KS07_07580 KS07_07595 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KS07_07655 SM00831 Cation transporter/ATPase, N-terminus KS07_07670 SM00072 Guanylate kinase homologues. KS07_07675 SM01409 KS07_07675 KS07_07685 SM00487 DEAD-like helicases superfamily KS07_07685 SM00490 helicase superfamily c-terminal domain KS07_07710 SM00331 Sigma factor PP2C-like phosphatases KS07_07710 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KS07_07715 SM00220 Serine/Threonine protein kinases, catalytic domain KS07_07715 SM00740 KS07_07715 KS07_07730 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain KS07_07750 SM01120 KS07_07750 KS07_07750 SM01121 KS07_07750 KS07_07765 SM00487 DEAD-like helicases superfamily KS07_07765 SM00490 helicase superfamily c-terminal domain KS07_07780 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_07785 SM00822 KS07_07785 KS07_07795 SM00358 Double-stranded RNA binding motif KS07_07795 SM00535 Ribonuclease III family KS07_07800 SM00968 SMC proteins Flexible Hinge Domain KS07_07805 SM00382 ATPases associated with a variety of cellular activities KS07_07805 SM00962 SRP54-type protein, GTPase domain KS07_07805 SM00963 SRP54-type protein, helical bundle domain KS07_07820 SM00382 ATPases associated with a variety of cellular activities KS07_07820 SM00962 SRP54-type protein, GTPase domain KS07_07820 SM00963 SRP54-type protein, helical bundle domain KS07_07880 SM00881 CoA binding domain KS07_07890 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KS07_07890 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KS07_07890 SM00493 KS07_07890 KS07_07910 SM00382 ATPases associated with a variety of cellular activities KS07_07910 SM01086 C-terminal, D2-small domain, of ClpB protein KS07_07950 SM00382 ATPases associated with a variety of cellular activities KS07_08000 SM00448 cheY-homologous receiver domain KS07_08035 SM00962 SRP54-type protein, GTPase domain KS07_08045 SM00448 cheY-homologous receiver domain KS07_08050 SM00073 Histidine Phosphotransfer domain KS07_08050 SM00260 Two component signalling adaptor domain KS07_08050 SM00387 Histidine kinase-like ATPases KS07_08050 SM01231 KS07_08050 KS07_08055 SM00260 Two component signalling adaptor domain KS07_08115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_08125 SM00479 KS07_08125 KS07_08125 SM00481 DNA polymerase alpha chain like domain KS07_08135 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_08135 SM00322 K homology RNA-binding domain KS07_08170 SM00904 Riboflavin kinase KS07_08175 SM01387 KS07_08175 KS07_08180 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_08180 SM00322 K homology RNA-binding domain KS07_08210 SM00859 Semialdehyde dehydrogenase, NAD binding domain KS07_08220 SM01130 KS07_08220 KS07_08225 SM00849 Metallo-beta-lactamase superfamily KS07_08240 SM00382 ATPases associated with a variety of cellular activities KS07_08240 SM00843 KS07_08240 KS07_08245 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_08245 SM00866 KS07_08245 KS07_08255 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_08290 SM00530 Helix-turn-helix XRE-family like proteins KS07_08300 SM00852 Probable molybdopterin binding domain KS07_08305 SM00382 ATPases associated with a variety of cellular activities KS07_08315 SM00322 K homology RNA-binding domain KS07_08315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_08330 SM00829 Enoylreductase KS07_08340 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_08355 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KS07_08355 SM00534 ATPase domain of DNA mismatch repair MUTS family KS07_08360 SM00853 MutL C terminal dimerisation domain KS07_08360 SM01340 KS07_08360 KS07_08370 SM00849 Metallo-beta-lactamase superfamily KS07_08375 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_08380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_08385 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_08410 SM00822 KS07_08410 KS07_08410 SM00823 Phosphopantetheine attachment site KS07_08410 SM00825 Beta-ketoacyl synthase KS07_08410 SM00826 KS07_08410 KS07_08410 SM01294 KS07_08410 KS07_08415 SM00822 KS07_08415 KS07_08415 SM00823 Phosphopantetheine attachment site KS07_08415 SM00825 Beta-ketoacyl synthase KS07_08415 SM00826 KS07_08415 KS07_08415 SM01294 KS07_08415 KS07_08420 SM00822 KS07_08420 KS07_08420 SM00823 Phosphopantetheine attachment site KS07_08420 SM00825 Beta-ketoacyl synthase KS07_08420 SM00826 KS07_08420 KS07_08420 SM01294 KS07_08420 KS07_08425 SM00822 KS07_08425 KS07_08425 SM00823 Phosphopantetheine attachment site KS07_08425 SM00825 Beta-ketoacyl synthase KS07_08425 SM00826 KS07_08425 KS07_08425 SM01294 KS07_08425 KS07_08430 SM00823 Phosphopantetheine attachment site KS07_08430 SM00825 Beta-ketoacyl synthase KS07_08430 SM01294 KS07_08430 KS07_08535 SM00646 KS07_08535 KS07_08545 SM00382 ATPases associated with a variety of cellular activities KS07_08560 SM00422 helix_turn_helix, mercury resistance KS07_08565 SM01230 KS07_08565 KS07_08645 SM00829 Enoylreductase KS07_08715 SM00710 Parallel beta-helix repeats KS07_08755 SM00257 Lysin motif KS07_08760 SM00857 Resolvase, N terminal domain KS07_08770 SM00861 Transketolase, pyrimidine binding domain KS07_08795 SM00448 cheY-homologous receiver domain KS07_08865 SM01207 KS07_08865 KS07_08870 SM00881 CoA binding domain KS07_08875 SM00387 Histidine kinase-like ATPases KS07_08875 SM00433 TopoisomeraseII KS07_08880 SM00434 DNA Topoisomerase IV KS07_08905 SM00829 Enoylreductase KS07_08925 SM00354 helix_turn _helix lactose operon repressor KS07_08965 SM01067 Cellulose binding domain KS07_08975 SM00387 Histidine kinase-like ATPases KS07_08975 SM00388 His Kinase A (phosphoacceptor) domain KS07_08980 SM00448 cheY-homologous receiver domain KS07_08980 SM00862 Transcriptional regulatory protein, C terminal KS07_08990 SM00606 Cellulose Binding Domain Type IV KS07_08995 SM00823 Phosphopantetheine attachment site KS07_08995 SM00824 Thioesterase KS07_09000 SM00823 Phosphopantetheine attachment site KS07_09005 SM00823 Phosphopantetheine attachment site KS07_09005 SM00825 Beta-ketoacyl synthase KS07_09010 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_09015 SM00822 KS07_09015 KS07_09020 SM00882 Coenzyme A transferase KS07_09025 SM00882 Coenzyme A transferase KS07_09040 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_09040 SM00876 Biotin and Thiamin Synthesis associated domain KS07_09100 SM00878 Biotin carboxylase C-terminal domain KS07_09125 SM00824 Thioesterase KS07_09130 SM00823 Phosphopantetheine attachment site KS07_09135 SM00823 Phosphopantetheine attachment site KS07_09140 SM00823 Phosphopantetheine attachment site KS07_09140 SM01294 KS07_09140 KS07_09145 SM00823 Phosphopantetheine attachment site KS07_09195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KS07_09210 SM00829 Enoylreductase KS07_09230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KS07_09245 SM00822 KS07_09245 KS07_09275 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KS07_09290 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_09300 SM00860 SMI1 / KNR4 family KS07_09315 SM00342 helix_turn_helix, arabinose operon control protein KS07_09325 SM00849 Metallo-beta-lactamase superfamily KS07_09335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KS07_09370 SM00257 Lysin motif KS07_09375 SM00341 Helicase and RNase D C-terminal KS07_09375 SM00487 DEAD-like helicases superfamily KS07_09375 SM00490 helicase superfamily c-terminal domain KS07_09375 SM00956 KS07_09375 KS07_09450 SM00849 Metallo-beta-lactamase superfamily KS07_09460 SM00861 Transketolase, pyrimidine binding domain KS07_09465 SM00327 von Willebrand factor (vWF) type A domain KS07_09470 SM00382 ATPases associated with a variety of cellular activities KS07_09480 SM00257 Lysin motif KS07_09585 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_09585 SM00866 KS07_09585 KS07_09590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_09590 SM00245 tail specific protease KS07_09625 SM00014 Acid phosphatase homologues KS07_09675 SM00882 Coenzyme A transferase KS07_09680 SM00882 Coenzyme A transferase KS07_09690 SM00871 Bacterial transcription activator, effector binding domain KS07_09745 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_09820 SM00567 E-Z type HEAT repeats KS07_09820 SM00932 Scaffold protein Nfu/NifU N terminal KS07_09825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_09845 SM00357 Cold shock protein domain KS07_09885 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KS07_09885 SM00475 5'-3' exonuclease KS07_09970 SM00644 KS07_09970 KS07_09995 SM00710 Parallel beta-helix repeats KS07_10000 SM00047 Lysozyme subfamily 2 KS07_10075 SM00507 HNH nucleases KS07_10140 SM00382 ATPases associated with a variety of cellular activities KS07_10195 SM00530 Helix-turn-helix XRE-family like proteins KS07_10200 SM00530 Helix-turn-helix XRE-family like proteins KS07_10225 SM00491 KS07_10225 KS07_10235 SM00981 KS07_10235 KS07_10260 SM00487 DEAD-like helicases superfamily KS07_10260 SM00490 helicase superfamily c-terminal domain KS07_10310 SM00060 Fibronectin type 3 domain KS07_10320 SM00478 endonuclease III KS07_10320 SM00525 KS07_10320 KS07_10350 SM00479 KS07_10350 KS07_10350 SM00487 DEAD-like helicases superfamily KS07_10350 SM00491 KS07_10350 KS07_10390 SM00851 MGS-like domain KS07_10410 SM00835 Cupin KS07_10445 SM00914 KS07_10445 KS07_10450 SM00028 Tetratricopeptide repeats KS07_10515 SM00138 Methyltransferase, chemotaxis proteins KS07_10520 SM00562 KS07_10520 KS07_10550 SM00411 bacterial (prokaryotic) histone like domain KS07_10595 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_10635 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS07_10655 SM00257 Lysin motif KS07_10665 SM00487 DEAD-like helicases superfamily KS07_10665 SM00490 helicase superfamily c-terminal domain KS07_10700 SM00091 PAS domain KS07_10700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_10700 SM00387 Histidine kinase-like ATPases KS07_10700 SM00388 His Kinase A (phosphoacceptor) domain KS07_10705 SM00448 cheY-homologous receiver domain KS07_10705 SM00862 Transcriptional regulatory protein, C terminal KS07_10725 SM00363 S4 RNA-binding domain KS07_10860 SM00387 Histidine kinase-like ATPases KS07_10870 SM00936 Penicillin-binding protein 5, C-terminal domain KS07_10915 SM00919 Malic enzyme, NAD binding domain KS07_10915 SM01274 KS07_10915 KS07_10930 SM00870 KS07_10930 KS07_10935 SM00530 Helix-turn-helix XRE-family like proteins KS07_11035 SM00849 Metallo-beta-lactamase superfamily KS07_11060 SM00823 Phosphopantetheine attachment site KS07_11060 SM00825 Beta-ketoacyl synthase KS07_11060 SM00829 Enoylreductase KS07_11060 SM01294 KS07_11060 KS07_11065 SM00822 KS07_11065 KS07_11065 SM00823 Phosphopantetheine attachment site KS07_11065 SM00825 Beta-ketoacyl synthase KS07_11065 SM00826 KS07_11065 KS07_11070 SM00822 KS07_11070 KS07_11070 SM00823 Phosphopantetheine attachment site KS07_11070 SM00825 Beta-ketoacyl synthase KS07_11070 SM01294 KS07_11070 KS07_11075 SM00822 KS07_11075 KS07_11075 SM00823 Phosphopantetheine attachment site KS07_11075 SM00825 Beta-ketoacyl synthase KS07_11075 SM00826 KS07_11075 KS07_11075 SM01294 KS07_11075 KS07_11080 SM00822 KS07_11080 KS07_11080 SM00823 Phosphopantetheine attachment site KS07_11080 SM00825 Beta-ketoacyl synthase KS07_11080 SM00826 KS07_11080 KS07_11080 SM01294 KS07_11080 KS07_11085 SM00822 KS07_11085 KS07_11085 SM00823 Phosphopantetheine attachment site KS07_11085 SM00825 Beta-ketoacyl synthase KS07_11085 SM01294 KS07_11085 KS07_11090 SM00822 KS07_11090 KS07_11090 SM00823 Phosphopantetheine attachment site KS07_11090 SM00825 Beta-ketoacyl synthase KS07_11090 SM00826 KS07_11090 KS07_11090 SM01294 KS07_11090 KS07_11115 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KS07_11120 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KS07_11150 SM00849 Metallo-beta-lactamase superfamily KS07_11160 SM01350 KS07_11160 KS07_11210 SM00382 ATPases associated with a variety of cellular activities KS07_11220 SM00062 Bacterial periplasmic substrate-binding proteins KS07_11220 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KS07_11230 SM00046 Diacylglycerol kinase catalytic domain (presumed) KS07_11240 SM00861 Transketolase, pyrimidine binding domain KS07_11260 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS07_11270 SM00091 PAS domain KS07_11270 SM00382 ATPases associated with a variety of cellular activities KS07_11315 SM00646 KS07_11315 KS07_11330 SM00530 Helix-turn-helix XRE-family like proteins KS07_11355 SM01005 Alanine racemase, C-terminal domain KS07_11360 SM00448 cheY-homologous receiver domain KS07_11365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_11380 SM00363 S4 RNA-binding domain KS07_11385 SM00861 Transketolase, pyrimidine binding domain KS07_11420 SM00878 Biotin carboxylase C-terminal domain KS07_11465 SM00382 ATPases associated with a variety of cellular activities KS07_11475 SM00841 Elongation factor P, C-terminal KS07_11475 SM01185 KS07_11475 KS07_11505 SM00529 Helix-turn-helix diphteria tox regulatory element KS07_11515 SM00450 Rhodanese Homology Domain KS07_11535 SM00487 DEAD-like helicases superfamily KS07_11535 SM00490 helicase superfamily c-terminal domain KS07_11550 SM00530 Helix-turn-helix XRE-family like proteins KS07_11610 SM00382 ATPases associated with a variety of cellular activities KS07_11620 SM01091 Transporter associated domain KS07_11645 SM00849 Metallo-beta-lactamase superfamily KS07_11665 SM00631 KS07_11665 KS07_11710 SM00382 ATPases associated with a variety of cellular activities KS07_11715 SM00382 ATPases associated with a variety of cellular activities KS07_11760 SM00257 Lysin motif KS07_11795 SM00518 AP endonuclease family 2 KS07_11800 SM00487 DEAD-like helicases superfamily KS07_11800 SM00490 helicase superfamily c-terminal domain KS07_11835 SM00400 zinc finger KS07_11835 SM00493 KS07_11835 KS07_11850 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_11895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_11945 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_11960 SM00271 DnaJ molecular chaperone homology domain KS07_11980 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_11985 SM00838 Elongation factor G C-terminus KS07_12020 SM00849 Metallo-beta-lactamase superfamily KS07_12030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KS07_12050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_12060 SM01103 KS07_12060 KS07_12145 SM00388 His Kinase A (phosphoacceptor) domain KS07_12150 SM00448 cheY-homologous receiver domain KS07_12150 SM00862 Transcriptional regulatory protein, C terminal KS07_12225 SM00849 Metallo-beta-lactamase superfamily KS07_12280 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KS07_12280 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KS07_12365 SM00732 Likely ribonuclease with RNase H fold. KS07_12375 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KS07_12385 SM00382 ATPases associated with a variety of cellular activities KS07_12390 SM00062 Bacterial periplasmic substrate-binding proteins KS07_12390 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KS07_12420 SM00382 ATPases associated with a variety of cellular activities KS07_12425 SM00028 Tetratricopeptide repeats KS07_12445 SM00382 ATPases associated with a variety of cellular activities KS07_12475 SM00287 Bacterial SH3 domain homologues KS07_12475 SM00646 KS07_12475 KS07_12485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_12485 SM00954 Region found in RelA / SpoT proteins KS07_12535 SM01323 KS07_12535 KS07_12555 SM00382 ATPases associated with a variety of cellular activities KS07_12560 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KS07_12580 SM00257 Lysin motif KS07_12625 SM01317 KS07_12625 KS07_12720 SM00257 Lysin motif KS07_12730 SM01004 Delta-aminolevulinic acid dehydratase KS07_12765 SM00382 ATPases associated with a variety of cellular activities KS07_12765 SM00464 Found in ATP-dependent protease La (LON) KS07_12770 SM00382 ATPases associated with a variety of cellular activities KS07_12775 SM00382 ATPases associated with a variety of cellular activities KS07_12775 SM00994 ClpX C4-type zinc finger KS07_12775 SM01086 C-terminal, D2-small domain, of ClpB protein KS07_12800 SM01329 KS07_12800 KS07_12805 SM00917 LeuA allosteric (dimerisation) domain KS07_12860 SM00909 Sporulation and spore germination KS07_12870 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_12875 SM00421 helix_turn_helix, Lux Regulon KS07_12915 SM00465 GIY-YIG type nucleases (URI domain) KS07_12925 SM00813 Alpha-L-arabinofuranosidase C-terminus KS07_12930 SM00893 Electron transfer flavoprotein domain KS07_12935 SM00893 Electron transfer flavoprotein domain KS07_12965 SM00463 Small MutS-related domain KS07_12965 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KS07_12965 SM00534 ATPase domain of DNA mismatch repair MUTS family KS07_12970 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KS07_12970 SM00481 DNA polymerase alpha chain like domain KS07_12970 SM00483 DNA polymerase X family KS07_12990 SM00873 B3/4 domain KS07_12990 SM00874 tRNA synthetase B5 domain KS07_12990 SM00896 Ferredoxin-fold anticodon binding domain KS07_13000 SM00967 RNA 2'-O ribose methyltransferase substrate binding KS07_13030 SM00813 Alpha-L-arabinofuranosidase C-terminus KS07_13060 SM01007 Class II Aldolase and Adducin N-terminal domain KS07_13120 SM00448 cheY-homologous receiver domain KS07_13120 SM00850 LytTr DNA-binding domain KS07_13125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KS07_13125 SM00387 Histidine kinase-like ATPases KS07_13135 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KS07_13150 SM00382 ATPases associated with a variety of cellular activities KS07_13170 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KS07_13200 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KS07_13200 SM01232 KS07_13200 KS07_13205 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KS07_13205 SM00474 3'-5' exonuclease KS07_13205 SM00475 5'-3' exonuclease KS07_13205 SM00482 DNA polymerase A domain KS07_13210 SM00091 PAS domain KS07_13210 SM00387 Histidine kinase-like ATPases KS07_13210 SM00388 His Kinase A (phosphoacceptor) domain KS07_13215 SM00448 cheY-homologous receiver domain KS07_13215 SM00862 Transcriptional regulatory protein, C terminal KS07_13225 SM01329 KS07_13225 KS07_13300 SM00919 Malic enzyme, NAD binding domain KS07_13300 SM01274 KS07_13300 KS07_13305 SM00481 DNA polymerase alpha chain like domain KS07_13335 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_13340 SM00849 Metallo-beta-lactamase superfamily KS07_13365 SM00852 Probable molybdopterin binding domain KS07_13425 SM00981 KS07_13425 KS07_13465 SM00363 S4 RNA-binding domain KS07_13465 SM01390 KS07_13465 KS07_13545 SM00363 S4 RNA-binding domain KS07_13560 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_13580 SM00354 helix_turn _helix lactose operon repressor KS07_13585 SM00830 Chorismate mutase type II KS07_13610 SM00382 ATPases associated with a variety of cellular activities KS07_13610 SM00843 KS07_13610 KS07_13645 SM00919 Malic enzyme, NAD binding domain KS07_13645 SM01274 KS07_13645 KS07_13650 SM00849 Metallo-beta-lactamase superfamily KS07_13670 SM00046 Diacylglycerol kinase catalytic domain (presumed) KS07_13705 SM00382 ATPases associated with a variety of cellular activities KS07_13710 SM00420 helix_turn_helix, Deoxyribose operon repressor KS07_13715 SM00363 S4 RNA-binding domain KS07_13740 SM00354 helix_turn _helix lactose operon repressor KS07_13770 SM00450 Rhodanese Homology Domain KS07_13785 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) KS07_13785 SM00091 PAS domain KS07_13805 SM00382 ATPases associated with a variety of cellular activities KS07_13810 SM00387 Histidine kinase-like ATPases KS07_13815 SM00448 cheY-homologous receiver domain KS07_13815 SM00862 Transcriptional regulatory protein, C terminal KS07_13825 SM00382 ATPases associated with a variety of cellular activities KS07_13845 SM00382 ATPases associated with a variety of cellular activities KS07_13850 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_13860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KS07_13870 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_13940 SM00382 ATPases associated with a variety of cellular activities KS07_13980 SM01234 KS07_13980 KS07_13985 SM00947 Carbonic anhydrase KS07_14010 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain KS07_14175 SM00244 prohibitin homologues KS07_14220 SM00047 Lysozyme subfamily 2 KS07_14230 SM00835 Cupin KS07_14245 SM00028 Tetratricopeptide repeats KS07_14285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_14285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_14285 SM00319 Homologues of the ligand binding domain of Tar KS07_14290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_14290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_14290 SM00319 Homologues of the ligand binding domain of Tar KS07_14295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_14295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_14295 SM00319 Homologues of the ligand binding domain of Tar KS07_14300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). KS07_14300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_14300 SM00319 Homologues of the ligand binding domain of Tar KS07_14325 SM00642 Alpha-amylase domain KS07_14330 SM01091 Transporter associated domain KS07_14395 SM00316 Ribosomal protein S1-like RNA-binding domain KS07_14405 SM00344 helix_turn_helix ASNC type KS07_14425 SM00387 Histidine kinase-like ATPases KS07_14425 SM00388 His Kinase A (phosphoacceptor) domain KS07_14430 SM01298 KS07_14430 KS07_14435 SM00479 KS07_14435 KS07_14460 SM00091 PAS domain KS07_14460 SM00387 Histidine kinase-like ATPases KS07_14465 SM00448 cheY-homologous receiver domain KS07_14475 SM00382 ATPases associated with a variety of cellular activities KS07_14535 SM00421 helix_turn_helix, Lux Regulon KS07_14535 SM00448 cheY-homologous receiver domain KS07_14540 SM00387 Histidine kinase-like ATPases KS07_14565 SM00052 Putative diguanylate phosphodiesterase KS07_14605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_14650 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KS07_14650 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KS07_14660 SM00923 MbtH-like protein KS07_14665 SM00823 Phosphopantetheine attachment site KS07_14665 SM00824 Thioesterase KS07_14685 SM00822 KS07_14685 KS07_14745 SM01240 KS07_14745 KS07_14760 SM00382 ATPases associated with a variety of cellular activities KS07_14870 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_14950 SM00382 ATPases associated with a variety of cellular activities KS07_14955 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_14955 SM00866 KS07_14955 KS07_14990 SM00465 GIY-YIG type nucleases (URI domain) KS07_15035 SM00382 ATPases associated with a variety of cellular activities KS07_15060 SM00382 ATPases associated with a variety of cellular activities KS07_15060 SM00930 KS07_15060 KS07_15075 SM00493 KS07_15075 KS07_15130 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_15160 SM00382 ATPases associated with a variety of cellular activities KS07_15175 SM00822 KS07_15175 KS07_15185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_15190 SM00448 cheY-homologous receiver domain KS07_15190 SM00862 Transcriptional regulatory protein, C terminal KS07_15195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_15195 SM00387 Histidine kinase-like ATPases KS07_15195 SM00388 His Kinase A (phosphoacceptor) domain KS07_15235 SM00421 helix_turn_helix, Lux Regulon KS07_15235 SM00448 cheY-homologous receiver domain KS07_15240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_15240 SM00387 Histidine kinase-like ATPases KS07_15275 SM00382 ATPases associated with a variety of cellular activities KS07_15300 SM00387 Histidine kinase-like ATPases KS07_15300 SM00388 His Kinase A (phosphoacceptor) domain KS07_15305 SM00448 cheY-homologous receiver domain KS07_15305 SM00862 Transcriptional regulatory protein, C terminal KS07_15325 SM00835 Cupin KS07_15335 SM00382 ATPases associated with a variety of cellular activities KS07_15390 SM00421 helix_turn_helix, Lux Regulon KS07_15390 SM00448 cheY-homologous receiver domain KS07_15400 SM00382 ATPases associated with a variety of cellular activities KS07_15515 SM00382 ATPases associated with a variety of cellular activities KS07_15530 SM00062 Bacterial periplasmic substrate-binding proteins KS07_15535 SM00062 Bacterial periplasmic substrate-binding proteins KS07_15580 SM00530 Helix-turn-helix XRE-family like proteins KS07_15585 SM00530 Helix-turn-helix XRE-family like proteins KS07_15590 SM00530 Helix-turn-helix XRE-family like proteins KS07_15600 SM00387 Histidine kinase-like ATPases KS07_15600 SM00388 His Kinase A (phosphoacceptor) domain KS07_15605 SM00448 cheY-homologous receiver domain KS07_15605 SM00862 Transcriptional regulatory protein, C terminal KS07_15620 SM00382 ATPases associated with a variety of cellular activities KS07_15640 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_15640 SM00382 ATPases associated with a variety of cellular activities KS07_15665 SM00116 Domain in cystathionine beta-synthase and other proteins. KS07_15665 SM00382 ATPases associated with a variety of cellular activities KS07_15735 SM00984 UDP binding domain KS07_15745 SM01192 KS07_15745 KS07_15745 SM01193 KS07_15745 KS07_15770 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KS07_15785 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_15820 SM00354 helix_turn _helix lactose operon repressor KS07_15870 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_15870 SM00895 KS07_15870 KS07_15965 SM00530 Helix-turn-helix XRE-family like proteins KS07_16040 SM00640 Glycosyl hydrolases family 32 KS07_16050 SM00354 helix_turn _helix lactose operon repressor KS07_16090 SM00947 Carbonic anhydrase KS07_16150 SM00028 Tetratricopeptide repeats KS07_16155 SM00387 Histidine kinase-like ATPases KS07_16155 SM00388 His Kinase A (phosphoacceptor) domain KS07_16160 SM00448 cheY-homologous receiver domain KS07_16160 SM00862 Transcriptional regulatory protein, C terminal KS07_16165 SM00382 ATPases associated with a variety of cellular activities KS07_16245 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_16245 SM00866 KS07_16245 KS07_16285 SM00382 ATPases associated with a variety of cellular activities KS07_16290 SM00487 DEAD-like helicases superfamily KS07_16290 SM00490 helicase superfamily c-terminal domain KS07_16315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_16325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_16325 SM00245 tail specific protease KS07_16330 SM00710 Parallel beta-helix repeats KS07_16340 SM00382 ATPases associated with a variety of cellular activities KS07_16355 SM00937 KS07_16355 KS07_16360 SM00957 SecA DEAD-like domain KS07_16360 SM00958 SecA preprotein cross-linking domain KS07_16445 SM00487 DEAD-like helicases superfamily KS07_16445 SM00490 helicase superfamily c-terminal domain KS07_16455 SM00421 helix_turn_helix, Lux Regulon KS07_16455 SM00448 cheY-homologous receiver domain KS07_16500 SM00984 UDP binding domain KS07_16520 SM00646 KS07_16520 KS07_16550 SM00382 ATPases associated with a variety of cellular activities KS07_16585 SM00047 Lysozyme subfamily 2 KS07_16585 SM00287 Bacterial SH3 domain homologues KS07_16645 SM00854 Bacterial capsule synthesis protein PGA_cap KS07_16675 SM00354 helix_turn _helix lactose operon repressor KS07_16690 SM00382 ATPases associated with a variety of cellular activities KS07_16705 SM00287 Bacterial SH3 domain homologues KS07_16755 SM00903 Flavin reductase like domain KS07_16770 SM00344 helix_turn_helix ASNC type KS07_16810 SM00860 SMI1 / KNR4 family KS07_16835 SM00984 UDP binding domain KS07_16865 SM00487 DEAD-like helicases superfamily KS07_16865 SM00490 helicase superfamily c-terminal domain KS07_16875 SM00420 helix_turn_helix, Deoxyribose operon repressor KS07_16875 SM01134 KS07_16875 KS07_16905 SM00028 Tetratricopeptide repeats KS07_16930 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_16960 SM00938 Nitrogen regulatory protein P-II KS07_16970 SM00014 Acid phosphatase homologues KS07_17000 SM00155 Phospholipase D. Active site motifs. KS07_17050 SM00028 Tetratricopeptide repeats KS07_17055 SM00729 Elongator protein 3, MiaB family, Radical SAM KS07_17070 SM00327 von Willebrand factor (vWF) type A domain KS07_17075 SM00327 von Willebrand factor (vWF) type A domain KS07_17110 SM00382 ATPases associated with a variety of cellular activities KS07_17170 SM00226 Low molecular weight phosphatase family KS07_17210 SM00937 KS07_17210 KS07_17230 SM00919 Malic enzyme, NAD binding domain KS07_17230 SM01274 KS07_17230 KS07_17245 SM00357 Cold shock protein domain KS07_17245 SM00382 ATPases associated with a variety of cellular activities KS07_17245 SM00959 Rho termination factor, N-terminal domain KS07_17275 SM00448 cheY-homologous receiver domain KS07_17300 SM00155 Phospholipase D. Active site motifs. KS07_17315 SM00382 ATPases associated with a variety of cellular activities KS07_17320 SM00155 Phospholipase D. Active site motifs. KS07_17345 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KS07_17360 SM00100 Cyclic nucleotide-monophosphate binding domain KS07_17360 SM00419 helix_turn_helix, cAMP Regulatory protein KS07_17370 SM00836 DALR anticodon binding domain KS07_17370 SM01016 Arginyl tRNA synthetase N terminal dom KS07_17400 SM00028 Tetratricopeptide repeats KS07_17410 SM00530 Helix-turn-helix XRE-family like proteins KS07_17440 SM00421 helix_turn_helix, Lux Regulon KS07_17480 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_17495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KS07_17520 SM00382 ATPases associated with a variety of cellular activities KS07_17635 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS07_17640 SM00387 Histidine kinase-like ATPases KS07_17640 SM00388 His Kinase A (phosphoacceptor) domain KS07_17645 SM00448 cheY-homologous receiver domain KS07_17645 SM00862 Transcriptional regulatory protein, C terminal KS07_17660 SM00382 ATPases associated with a variety of cellular activities KS07_17695 SM00858 KS07_17695 KS07_17740 SM00986 Uracil DNA glycosylase superfamily KS07_17740 SM00987 UreE urease accessory protein, C-terminal domain KS07_17775 SM00640 Glycosyl hydrolases family 32 KS07_17785 SM01061 CAT RNA binding domain KS07_17930 SM00422 helix_turn_helix, mercury resistance KS07_17940 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase KS07_17965 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_17970 SM00363 S4 RNA-binding domain KS07_17975 SM00954 Region found in RelA / SpoT proteins KS07_18060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KS07_18105 SM01060 KS07_18105 KS07_18125 SM00382 ATPases associated with a variety of cellular activities KS07_18130 SM00382 ATPases associated with a variety of cellular activities KS07_18155 SM00382 ATPases associated with a variety of cellular activities KS07_18225 SM01060 KS07_18225 KS07_18240 SM01061 CAT RNA binding domain KS07_18250 SM00487 DEAD-like helicases superfamily KS07_18250 SM00490 helicase superfamily c-terminal domain KS07_18290 SM00656 KS07_18290 KS07_18305 SM00487 DEAD-like helicases superfamily KS07_18305 SM00490 helicase superfamily c-terminal domain KS07_18350 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain KS07_18360 SM01133 KS07_18360 KS07_18415 SM00382 ATPases associated with a variety of cellular activities KS07_18420 SM00387 Histidine kinase-like ATPases KS07_18425 SM00448 cheY-homologous receiver domain KS07_18425 SM00862 Transcriptional regulatory protein, C terminal KS07_18480 SM00420 helix_turn_helix, Deoxyribose operon repressor KS07_18480 SM01134 KS07_18480 KS07_18495 SM00387 Histidine kinase-like ATPases KS07_18510 SM00421 helix_turn_helix, Lux Regulon KS07_18510 SM00448 cheY-homologous receiver domain KS07_18540 SM00564 beta-propeller repeat KS07_18550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KS07_18600 SM01092 CO dehydrogenase flavoprotein C-terminal domain KS07_18605 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KS07_18670 SM00028 Tetratricopeptide repeats KS07_18695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KS07_18700 SM00382 ATPases associated with a variety of cellular activities KS07_18705 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. KS07_18710 SM00382 ATPases associated with a variety of cellular activities KS07_18730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_18730 SM00387 Histidine kinase-like ATPases KS07_18730 SM00388 His Kinase A (phosphoacceptor) domain KS07_18740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KS07_18745 SM00849 Metallo-beta-lactamase superfamily KS07_18760 SM00091 PAS domain KS07_18760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KS07_18760 SM00387 Histidine kinase-like ATPases KS07_18760 SM00388 His Kinase A (phosphoacceptor) domain KS07_18765 SM00448 cheY-homologous receiver domain KS07_18765 SM00862 Transcriptional regulatory protein, C terminal KS07_18805 SM00382 ATPases associated with a variety of cellular activities KS07_18870 SM00267 diguanylate cyclase KS07_18895 SM01131 KS07_18895 KS07_18910 SM00640 Glycosyl hydrolases family 32 KS07_18915 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_18915 SM00895 KS07_18915 KS07_18945 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_18955 SM00347 helix_turn_helix multiple antibiotic resistance protein KS07_19005 SM00345 helix_turn_helix gluconate operon transcriptional repressor KS07_19055 SM00354 helix_turn _helix lactose operon repressor KS07_19070 SM00342 helix_turn_helix, arabinose operon control protein KS07_19095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KS07_19120 SM00470 ParB-like nuclease domain KS07_19130 SM00470 ParB-like nuclease domain KS07_19140 SM01228 KS07_19140 KS07_19150 SM00393 Putative single-stranded nucleic acids-binding domain KS07_19150 SM01245 KS07_19150