BEST7003_0001 SM00382 ATPases associated with a variety of cellular activities BEST7003_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain BEST7003_0002 SM00480 DNA polymerase III beta subunit BEST7003_0006 SM00387 Histidine kinase-like ATPases BEST7003_0006 SM00433 TopoisomeraseII BEST7003_0007 SM00434 DNA Topoisomerase IV BEST7003_0009 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_0009 SM01240 BEST7003_0009 BEST7003_0010 SM00936 Penicillin-binding protein 5, C-terminal domain BEST7003_0016 SM00257 Lysin motif BEST7003_0016 SM00636 BEST7003_0016 BEST7003_0019 SM00382 ATPases associated with a variety of cellular activities BEST7003_0021 SM00493 BEST7003_0021 BEST7003_0035 SM00465 GIY-YIG type nucleases (URI domain) BEST7003_0037 SM00966 SpoVT / AbrB like domain BEST7003_0040 SM01208 BEST7003_0040 BEST7003_0041 SM00493 BEST7003_0041 BEST7003_0042 SM00650 Ribosomal RNA adenine dimethylases BEST7003_0051 SM01400 BEST7003_0051 BEST7003_0055 SM00487 DEAD-like helicases superfamily BEST7003_0055 SM00490 helicase superfamily c-terminal domain BEST7003_0055 SM00982 BEST7003_0055 BEST7003_0055 SM01058 CarD-like/TRCF domain BEST7003_0056 SM00966 SpoVT / AbrB like domain BEST7003_0059 SM00363 S4 RNA-binding domain BEST7003_0063 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_0064 SM00331 Sigma factor PP2C-like phosphatases BEST7003_0064 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BEST7003_0066 SM00220 Serine/Threonine protein kinases, catalytic domain BEST7003_0067 SM00977 TilS substrate C-terminal domain BEST7003_0069 SM00382 ATPases associated with a variety of cellular activities BEST7003_0078 SM00905 Dihydroneopterin aldolase BEST7003_0080 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_0086 SM00382 ATPases associated with a variety of cellular activities BEST7003_0086 SM01086 C-terminal, D2-small domain, of ClpB protein BEST7003_0087 SM00382 ATPases associated with a variety of cellular activities BEST7003_0089 SM00670 Large family of predicted nucleotide-binding domains BEST7003_0094 SM00840 BEST7003_0094 BEST7003_0095 SM00535 Ribonuclease III family BEST7003_0096 SM00967 RNA 2'-O ribose methyltransferase substrate binding BEST7003_0100 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BEST7003_0100 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BEST7003_0101 SM00649 Ribosomal protein L11/L12 BEST7003_0107 SM00663 RNA polymerase I subunit A N-terminus BEST7003_0111 SM00838 Elongation factor G C-terminus BEST7003_0111 SM00889 Elongation factor G, domain IV BEST7003_0114 SM01403 BEST7003_0114 BEST7003_0118 SM01382 BEST7003_0118 BEST7003_0118 SM01383 BEST7003_0118 BEST7003_0121 SM00322 K homology RNA-binding domain BEST7003_0125 SM01374 BEST7003_0125 BEST7003_0126 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BEST7003_0138 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_0141 SM00662 RNA polymerases D BEST7003_0143 SM00382 ATPases associated with a variety of cellular activities BEST7003_0144 SM00382 ATPases associated with a variety of cellular activities BEST7003_0151 SM00646 BEST7003_0151 BEST7003_0154 SM01251 BEST7003_0154 BEST7003_0163 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0179 SM00478 endonuclease III BEST7003_0180 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0188 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_0192 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_0194 SM00382 ATPases associated with a variety of cellular activities BEST7003_0199 SM00448 cheY-homologous receiver domain BEST7003_0199 SM00862 Transcriptional regulatory protein, C terminal BEST7003_0200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_0200 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_0215 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0221 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0231 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0232 SM00450 Rhodanese Homology Domain BEST7003_0236 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0236 SM00866 BEST7003_0236 BEST7003_0243 SM00387 Histidine kinase-like ATPases BEST7003_0244 SM00448 cheY-homologous receiver domain BEST7003_0245 SM01130 BEST7003_0245 BEST7003_0248 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BEST7003_0249 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0249 SM00895 BEST7003_0249 BEST7003_0250 SM00858 BEST7003_0250 BEST7003_0254 SM00448 cheY-homologous receiver domain BEST7003_0254 SM00862 Transcriptional regulatory protein, C terminal BEST7003_0255 SM00387 Histidine kinase-like ATPases BEST7003_0255 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_0256 SM00382 ATPases associated with a variety of cellular activities BEST7003_0260 SM00327 von Willebrand factor (vWF) type A domain BEST7003_0268 SM00870 BEST7003_0268 BEST7003_0272 SM00387 Histidine kinase-like ATPases BEST7003_0273 SM00448 cheY-homologous receiver domain BEST7003_0273 SM00850 LytTr DNA-binding domain BEST7003_0274 SM00382 ATPases associated with a variety of cellular activities BEST7003_0281 SM00028 Tetratricopeptide repeats BEST7003_0283 SM00642 Alpha-amylase domain BEST7003_0285 SM00382 ATPases associated with a variety of cellular activities BEST7003_0296 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_0297 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_0297 SM00382 ATPases associated with a variety of cellular activities BEST7003_0303 SM00632 BEST7003_0303 BEST7003_0303 SM00642 Alpha-amylase domain BEST7003_0307 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0330 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEST7003_0335 SM00833 Cobalamin synthesis protein cobW C-terminal domain BEST7003_0337 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_0344 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_0344 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_0346 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BEST7003_0348 SM00823 Phosphopantetheine attachment site BEST7003_0348 SM01294 BEST7003_0348 BEST7003_0349 SM00823 Phosphopantetheine attachment site BEST7003_0349 SM01294 BEST7003_0349 BEST7003_0350 SM00823 Phosphopantetheine attachment site BEST7003_0355 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0359 SM00382 ATPases associated with a variety of cellular activities BEST7003_0361 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_0369 SM00710 Parallel beta-helix repeats BEST7003_0369 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BEST7003_0374 SM00382 ATPases associated with a variety of cellular activities BEST7003_0376 SM00448 cheY-homologous receiver domain BEST7003_0376 SM00862 Transcriptional regulatory protein, C terminal BEST7003_0377 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_0377 SM00387 Histidine kinase-like ATPases BEST7003_0377 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_0378 SM00028 Tetratricopeptide repeats BEST7003_0383 SM00382 ATPases associated with a variety of cellular activities BEST7003_0389 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_0390 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0397 SM00420 helix_turn_helix, Deoxyribose operon repressor BEST7003_0402 SM01329 BEST7003_0402 BEST7003_0412 SM00796 Allophanate hydrolase subunit 1 BEST7003_0413 SM00797 Allophanate hydrolase subunit 2 BEST7003_0414 SM00346 helix_turn_helix isocitrate lyase regulation BEST7003_0429 SM00344 helix_turn_helix ASNC type BEST7003_0430 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BEST7003_0430 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BEST7003_0430 SM00493 BEST7003_0430 BEST7003_0432 SM00267 diguanylate cyclase BEST7003_0450 SM00091 PAS domain BEST7003_0450 SM00387 Histidine kinase-like ATPases BEST7003_0451 SM00448 cheY-homologous receiver domain BEST7003_0454 SM00382 ATPases associated with a variety of cellular activities BEST7003_0464 SM00487 DEAD-like helicases superfamily BEST7003_0464 SM00490 helicase superfamily c-terminal domain BEST7003_0470 SM01005 Alanine racemase, C-terminal domain BEST7003_0475 SM00387 Histidine kinase-like ATPases BEST7003_0476 SM00331 Sigma factor PP2C-like phosphatases BEST7003_0480 SM00331 Sigma factor PP2C-like phosphatases BEST7003_0480 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BEST7003_0484 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0485 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_0485 SM00732 Likely ribonuclease with RNase H fold. BEST7003_0486 SM00731 SprT homologues. BEST7003_0488 SM00344 helix_turn_helix ASNC type BEST7003_0489 SM00344 helix_turn_helix ASNC type BEST7003_0497 SM00357 Cold shock protein domain BEST7003_0498 SM01058 CarD-like/TRCF domain BEST7003_0500 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0502 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0502 SM00871 Bacterial transcription activator, effector binding domain BEST7003_0503 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0509 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0519 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_0523 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_0528 SM00387 Histidine kinase-like ATPases BEST7003_0529 SM00421 helix_turn_helix, Lux Regulon BEST7003_0529 SM00448 cheY-homologous receiver domain BEST7003_0533 SM00422 helix_turn_helix, mercury resistance BEST7003_0533 SM00871 Bacterial transcription activator, effector binding domain BEST7003_0549 SM00382 ATPases associated with a variety of cellular activities BEST7003_0552 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0555 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_0558 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0558 SM00895 BEST7003_0558 BEST7003_0559 SM00257 Lysin motif BEST7003_0559 SM00636 BEST7003_0559 BEST7003_0562 SM00098 Alkaline phosphatase homologues BEST7003_0566 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_0573 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0573 SM00866 BEST7003_0573 BEST7003_0585 SM00382 ATPases associated with a variety of cellular activities BEST7003_0587 SM00881 CoA binding domain BEST7003_0592 SM00883 Chaperonin 10 Kd subunit BEST7003_0595 SM00028 Tetratricopeptide repeats BEST7003_0595 SM00382 ATPases associated with a variety of cellular activities BEST7003_0596 SM00829 Enoylreductase BEST7003_0607 SM00829 Enoylreductase BEST7003_0617 SM00460 Transglutaminase/protease-like homologues BEST7003_0619 SM01209 BEST7003_0619 BEST7003_0631 SM01001 AIR carboxylase BEST7003_0633 SM00998 Adenylosuccinate lyase C-terminus BEST7003_0636 SM01211 BEST7003_0636 BEST7003_0641 SM00798 AICARFT/IMPCHase bienzyme BEST7003_0641 SM00851 MGS-like domain BEST7003_0642 SM01209 BEST7003_0642 BEST7003_0642 SM01210 BEST7003_0642 BEST7003_0643 SM00344 helix_turn_helix ASNC type BEST7003_0652 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEST7003_0652 SM00292 breast cancer carboxy-terminal domain BEST7003_0652 SM00532 Ligase N family BEST7003_0659 SM00845 GatB domain BEST7003_0662 SM00046 Diacylglycerol kinase catalytic domain (presumed) BEST7003_0667 SM00487 DEAD-like helicases superfamily BEST7003_0668 SM00974 BEST7003_0668 BEST7003_0674 SM00028 Tetratricopeptide repeats BEST7003_0687 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_0687 SM00387 Histidine kinase-like ATPases BEST7003_0688 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0688 SM00448 cheY-homologous receiver domain BEST7003_0693 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0715 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0729 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_0730 SM00382 ATPases associated with a variety of cellular activities BEST7003_0732 SM00422 helix_turn_helix, mercury resistance BEST7003_0735 SM00382 ATPases associated with a variety of cellular activities BEST7003_0736 SM00487 DEAD-like helicases superfamily BEST7003_0736 SM00490 helicase superfamily c-terminal domain BEST7003_0738 SM00829 Enoylreductase BEST7003_0742 SM00382 ATPases associated with a variety of cellular activities BEST7003_0748 SM00656 BEST7003_0748 BEST7003_0750 SM00387 Histidine kinase-like ATPases BEST7003_0751 SM00448 cheY-homologous receiver domain BEST7003_0754 SM00849 Metallo-beta-lactamase superfamily BEST7003_0771 SM00642 Alpha-amylase domain BEST7003_0772 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0772 SM00866 BEST7003_0772 BEST7003_0778 SM00226 Low molecular weight phosphatase family BEST7003_0790 SM00478 endonuclease III BEST7003_0797 SM00861 Transketolase, pyrimidine binding domain BEST7003_0800 SM00382 ATPases associated with a variety of cellular activities BEST7003_0811 SM00382 ATPases associated with a variety of cellular activities BEST7003_0812 SM00382 ATPases associated with a variety of cellular activities BEST7003_0815 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_0819 SM00387 Histidine kinase-like ATPases BEST7003_0820 SM00421 helix_turn_helix, Lux Regulon BEST7003_0820 SM00448 cheY-homologous receiver domain BEST7003_0821 SM00382 ATPases associated with a variety of cellular activities BEST7003_0831 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0846 SM00287 Bacterial SH3 domain homologues BEST7003_0852 SM00478 endonuclease III BEST7003_0852 SM00525 BEST7003_0852 BEST7003_0858 SM00382 ATPases associated with a variety of cellular activities BEST7003_0871 SM01060 BEST7003_0871 BEST7003_0872 SM00382 ATPases associated with a variety of cellular activities BEST7003_0873 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_0879 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_0881 SM00567 E-Z type HEAT repeats BEST7003_0887 SM00763 PrkA AAA domain BEST7003_0889 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0895 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0896 SM00382 ATPases associated with a variety of cellular activities BEST7003_0897 SM00382 ATPases associated with a variety of cellular activities BEST7003_0899 SM00357 Cold shock protein domain BEST7003_0901 SM00267 diguanylate cyclase BEST7003_0907 SM00318 Staphylococcal nuclease homologues BEST7003_0909 SM00363 S4 RNA-binding domain BEST7003_0911 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_0921 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEST7003_0921 SM00387 Histidine kinase-like ATPases BEST7003_0922 SM00421 helix_turn_helix, Lux Regulon BEST7003_0922 SM00448 cheY-homologous receiver domain BEST7003_0926 SM00257 Lysin motif BEST7003_0930 SM00098 Alkaline phosphatase homologues BEST7003_0931 SM00257 Lysin motif BEST7003_0937 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_0943 SM00563 Phosphate acyltransferases BEST7003_0944 SM01091 Transporter associated domain BEST7003_0945 SM00422 helix_turn_helix, mercury resistance BEST7003_0947 SM01091 Transporter associated domain BEST7003_0958 SM00382 ATPases associated with a variety of cellular activities BEST7003_0959 SM00382 ATPases associated with a variety of cellular activities BEST7003_0969 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_0975 SM00382 ATPases associated with a variety of cellular activities BEST7003_0979 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_0984 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_0989 SM00382 ATPases associated with a variety of cellular activities BEST7003_1005 SM01022 BEST7003_1005 BEST7003_1007 SM00849 Metallo-beta-lactamase superfamily BEST7003_1015 SM00829 Enoylreductase BEST7003_1017 SM00855 Phosphoglycerate mutase family BEST7003_1021 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_1024 SM00914 BEST7003_1024 BEST7003_1027 SM00894 Excalibur calcium-binding domain BEST7003_1034 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_1040 SM00354 helix_turn _helix lactose operon repressor BEST7003_1066 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_1067 SM00354 helix_turn _helix lactose operon repressor BEST7003_1071 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_1080 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BEST7003_1086 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_1089 SM00752 Horizontally Transferred TransMembrane Domain BEST7003_1105 SM00859 Semialdehyde dehydrogenase, NAD binding domain BEST7003_1109 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BEST7003_1110 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEST7003_1120 SM00825 Beta-ketoacyl synthase BEST7003_1122 SM00382 ATPases associated with a variety of cellular activities BEST7003_1123 SM00382 ATPases associated with a variety of cellular activities BEST7003_1133 SM00382 ATPases associated with a variety of cellular activities BEST7003_1134 SM00382 ATPases associated with a variety of cellular activities BEST7003_1146 SM01118 BEST7003_1146 BEST7003_1148 SM00954 Region found in RelA / SpoT proteins BEST7003_1191 SM00635 Bacterial Ig-like domain 2 BEST7003_1210 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEST7003_1210 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEST7003_1220 SM00382 ATPases associated with a variety of cellular activities BEST7003_1222 SM00835 Cupin BEST7003_1228 SM00829 Enoylreductase BEST7003_1232 SM00354 helix_turn _helix lactose operon repressor BEST7003_1234 SM00858 BEST7003_1234 BEST7003_1237 SM00382 ATPases associated with a variety of cellular activities BEST7003_1238 SM00028 Tetratricopeptide repeats BEST7003_1241 SM00257 Lysin motif BEST7003_1241 SM00644 BEST7003_1241 BEST7003_1246 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_1249 SM00382 ATPases associated with a variety of cellular activities BEST7003_1269 SM00257 Lysin motif BEST7003_1282 SM00257 Lysin motif BEST7003_1282 SM00644 BEST7003_1282 BEST7003_1293 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_1298 SM00382 ATPases associated with a variety of cellular activities BEST7003_1301 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BEST7003_1303 SM00382 ATPases associated with a variety of cellular activities BEST7003_1322 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BEST7003_1325 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_1333 SM00382 ATPases associated with a variety of cellular activities BEST7003_1336 SM00448 cheY-homologous receiver domain BEST7003_1336 SM00862 Transcriptional regulatory protein, C terminal BEST7003_1337 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_1337 SM00387 Histidine kinase-like ATPases BEST7003_1337 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_1342 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_1342 SM00924 MgtE intracellular N domain BEST7003_1343 SM00422 helix_turn_helix, mercury resistance BEST7003_1346 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_1353 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BEST7003_1354 SM00052 Putative diguanylate phosphodiesterase BEST7003_1354 SM00267 diguanylate cyclase BEST7003_1366 SM00091 PAS domain BEST7003_1366 SM00387 Histidine kinase-like ATPases BEST7003_1366 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_1375 SM01007 Class II Aldolase and Adducin N-terminal domain BEST7003_1380 SM00387 Histidine kinase-like ATPases BEST7003_1380 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_1381 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_1384 SM00382 ATPases associated with a variety of cellular activities BEST7003_1384 SM01086 C-terminal, D2-small domain, of ClpB protein BEST7003_1391 SM00822 BEST7003_1391 BEST7003_1392 SM00257 Lysin motif BEST7003_1393 SM00257 Lysin motif BEST7003_1394 SM00636 BEST7003_1394 BEST7003_1406 SM00354 helix_turn _helix lactose operon repressor BEST7003_1407 SM01061 CAT RNA binding domain BEST7003_1414 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_1414 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_1418 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEST7003_1418 SM00091 PAS domain BEST7003_1418 SM00387 Histidine kinase-like ATPases BEST7003_1418 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_1421 SM00260 Two component signalling adaptor domain BEST7003_1421 SM00448 cheY-homologous receiver domain BEST7003_1424 SM00257 Lysin motif BEST7003_1430 SM00052 Putative diguanylate phosphodiesterase BEST7003_1449 SM00852 Probable molybdopterin binding domain BEST7003_1453 SM00382 ATPases associated with a variety of cellular activities BEST7003_1454 SM00382 ATPases associated with a variety of cellular activities BEST7003_1457 SM00382 ATPases associated with a variety of cellular activities BEST7003_1458 SM01066 Carbohydrate binding domain BEST7003_1459 SM00420 helix_turn_helix, Deoxyribose operon repressor BEST7003_1459 SM01134 BEST7003_1459 BEST7003_1464 SM00382 ATPases associated with a variety of cellular activities BEST7003_1469 SM00966 SpoVT / AbrB like domain BEST7003_1470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEST7003_1470 SM00091 PAS domain BEST7003_1470 SM00387 Histidine kinase-like ATPases BEST7003_1470 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_1474 SM00849 Metallo-beta-lactamase superfamily BEST7003_1481 SM00861 Transketolase, pyrimidine binding domain BEST7003_1499 SM00838 Elongation factor G C-terminus BEST7003_1503 SM00670 Large family of predicted nucleotide-binding domains BEST7003_1508 SM00878 Biotin carboxylase C-terminal domain BEST7003_1517 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_1527 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_1538 SM00740 BEST7003_1538 BEST7003_1539 SM00740 BEST7003_1539 BEST7003_1550 SM00842 Cell division protein FtsA BEST7003_1551 SM00864 Tubulin/FtsZ family, GTPase domain BEST7003_1551 SM00865 Tubulin/FtsZ family, C-terminal domain BEST7003_1556 SM00382 ATPases associated with a variety of cellular activities BEST7003_1563 SM00363 S4 RNA-binding domain BEST7003_1568 SM00363 S4 RNA-binding domain BEST7003_1573 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BEST7003_1574 SM00851 MGS-like domain BEST7003_1574 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEST7003_1574 SM01209 BEST7003_1574 BEST7003_1577 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BEST7003_1587 SM00831 Cation transporter/ATPase, N-terminus BEST7003_1590 SM00072 Guanylate kinase homologues. BEST7003_1591 SM01409 BEST7003_1591 BEST7003_1593 SM00487 DEAD-like helicases superfamily BEST7003_1593 SM00490 helicase superfamily c-terminal domain BEST7003_1598 SM00331 Sigma factor PP2C-like phosphatases BEST7003_1598 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BEST7003_1599 SM00220 Serine/Threonine protein kinases, catalytic domain BEST7003_1599 SM00740 BEST7003_1599 BEST7003_1602 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BEST7003_1605 SM01120 BEST7003_1605 BEST7003_1605 SM01121 BEST7003_1605 BEST7003_1608 SM00487 DEAD-like helicases superfamily BEST7003_1608 SM00490 helicase superfamily c-terminal domain BEST7003_1611 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BEST7003_1612 SM00822 BEST7003_1612 BEST7003_1614 SM00358 Double-stranded RNA binding motif BEST7003_1614 SM00535 Ribonuclease III family BEST7003_1615 SM00968 SMC proteins Flexible Hinge Domain BEST7003_1616 SM00382 ATPases associated with a variety of cellular activities BEST7003_1616 SM00962 SRP54-type protein, GTPase domain BEST7003_1616 SM00963 SRP54-type protein, helical bundle domain BEST7003_1619 SM00382 ATPases associated with a variety of cellular activities BEST7003_1619 SM00962 SRP54-type protein, GTPase domain BEST7003_1619 SM00963 SRP54-type protein, helical bundle domain BEST7003_1631 SM00881 CoA binding domain BEST7003_1633 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BEST7003_1633 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BEST7003_1633 SM00493 BEST7003_1633 BEST7003_1637 SM00382 ATPases associated with a variety of cellular activities BEST7003_1637 SM01086 C-terminal, D2-small domain, of ClpB protein BEST7003_1645 SM00382 ATPases associated with a variety of cellular activities BEST7003_1655 SM00448 cheY-homologous receiver domain BEST7003_1662 SM00962 SRP54-type protein, GTPase domain BEST7003_1664 SM00448 cheY-homologous receiver domain BEST7003_1665 SM00073 Histidine Phosphotransfer domain BEST7003_1665 SM00260 Two component signalling adaptor domain BEST7003_1665 SM00387 Histidine kinase-like ATPases BEST7003_1665 SM01231 BEST7003_1665 BEST7003_1666 SM00260 Two component signalling adaptor domain BEST7003_1678 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_1680 SM00479 BEST7003_1680 BEST7003_1680 SM00481 DNA polymerase alpha chain like domain BEST7003_1682 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_1682 SM00322 K homology RNA-binding domain BEST7003_1689 SM00904 Riboflavin kinase BEST7003_1690 SM01387 BEST7003_1690 BEST7003_1691 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_1691 SM00322 K homology RNA-binding domain BEST7003_1697 SM00859 Semialdehyde dehydrogenase, NAD binding domain BEST7003_1699 SM01130 BEST7003_1699 BEST7003_1700 SM00849 Metallo-beta-lactamase superfamily BEST7003_1703 SM00382 ATPases associated with a variety of cellular activities BEST7003_1703 SM00843 BEST7003_1703 BEST7003_1704 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_1704 SM00866 BEST7003_1704 BEST7003_1712 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_1714 SM00852 Probable molybdopterin binding domain BEST7003_1715 SM00382 ATPases associated with a variety of cellular activities BEST7003_1717 SM00322 K homology RNA-binding domain BEST7003_1717 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_1720 SM00829 Enoylreductase BEST7003_1722 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_1725 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BEST7003_1725 SM00534 ATPase domain of DNA mismatch repair MUTS family BEST7003_1726 SM00853 MutL C terminal dimerisation domain BEST7003_1726 SM01340 BEST7003_1726 BEST7003_1730 SM00849 Metallo-beta-lactamase superfamily BEST7003_1731 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BEST7003_1732 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BEST7003_1733 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BEST7003_1735 SM00825 Beta-ketoacyl synthase BEST7003_1739 SM00822 BEST7003_1739 BEST7003_1739 SM00823 Phosphopantetheine attachment site BEST7003_1739 SM00825 Beta-ketoacyl synthase BEST7003_1739 SM00826 BEST7003_1739 BEST7003_1739 SM01294 BEST7003_1739 BEST7003_1740 SM00822 BEST7003_1740 BEST7003_1740 SM00823 Phosphopantetheine attachment site BEST7003_1740 SM00825 Beta-ketoacyl synthase BEST7003_1740 SM00826 BEST7003_1740 BEST7003_1740 SM01294 BEST7003_1740 BEST7003_1741 SM00822 BEST7003_1741 BEST7003_1741 SM00823 Phosphopantetheine attachment site BEST7003_1741 SM00825 Beta-ketoacyl synthase BEST7003_1741 SM00826 BEST7003_1741 BEST7003_1741 SM01294 BEST7003_1741 BEST7003_1742 SM00823 Phosphopantetheine attachment site BEST7003_1742 SM00825 Beta-ketoacyl synthase BEST7003_1742 SM00826 BEST7003_1742 BEST7003_1743 SM00822 BEST7003_1743 BEST7003_1743 SM00823 Phosphopantetheine attachment site BEST7003_1743 SM00825 Beta-ketoacyl synthase BEST7003_1743 SM00826 BEST7003_1743 BEST7003_1743 SM01294 BEST7003_1743 BEST7003_1744 SM00823 Phosphopantetheine attachment site BEST7003_1744 SM00825 Beta-ketoacyl synthase BEST7003_1744 SM01294 BEST7003_1744 BEST7003_1747 SM00849 Metallo-beta-lactamase superfamily BEST7003_1763 SM00646 BEST7003_1763 BEST7003_1764 SM00382 ATPases associated with a variety of cellular activities BEST7003_1767 SM00422 helix_turn_helix, mercury resistance BEST7003_1768 SM01230 BEST7003_1768 BEST7003_1772 SM00860 SMI1 / KNR4 family BEST7003_1785 SM00318 Staphylococcal nuclease homologues BEST7003_1787 SM01005 Alanine racemase, C-terminal domain BEST7003_1813 SM00257 Lysin motif BEST7003_1814 SM00857 Resolvase, N terminal domain BEST7003_1816 SM00861 Transketolase, pyrimidine binding domain BEST7003_1821 SM00448 cheY-homologous receiver domain BEST7003_1835 SM01207 BEST7003_1835 BEST7003_1836 SM00881 CoA binding domain BEST7003_1837 SM00387 Histidine kinase-like ATPases BEST7003_1837 SM00433 TopoisomeraseII BEST7003_1838 SM00434 DNA Topoisomerase IV BEST7003_1842 SM01067 Cellulose binding domain BEST7003_1845 SM00606 Cellulose Binding Domain Type IV BEST7003_1854 SM00878 Biotin carboxylase C-terminal domain BEST7003_1860 SM00823 Phosphopantetheine attachment site BEST7003_1860 SM00824 Thioesterase BEST7003_1861 SM00823 Phosphopantetheine attachment site BEST7003_1862 SM00823 Phosphopantetheine attachment site BEST7003_1862 SM01294 BEST7003_1862 BEST7003_1863 SM00823 Phosphopantetheine attachment site BEST7003_1872 SM00829 Enoylreductase BEST7003_1876 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BEST7003_1879 SM00822 BEST7003_1879 BEST7003_1886 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEST7003_1891 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_1891 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_1895 SM00656 BEST7003_1895 BEST7003_1898 SM00835 Cupin BEST7003_1905 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_1918 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_1936 SM00860 SMI1 / KNR4 family BEST7003_1938 SM00860 SMI1 / KNR4 family BEST7003_1940 SM00710 Parallel beta-helix repeats BEST7003_1942 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_1945 SM00849 Metallo-beta-lactamase superfamily BEST7003_1946 SM00871 Bacterial transcription activator, effector binding domain BEST7003_1949 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_1957 SM00421 helix_turn_helix, Lux Regulon BEST7003_1957 SM00448 cheY-homologous receiver domain BEST7003_1958 SM00257 Lysin motif BEST7003_1959 SM00341 Helicase and RNase D C-terminal BEST7003_1959 SM00487 DEAD-like helicases superfamily BEST7003_1959 SM00490 helicase superfamily c-terminal domain BEST7003_1959 SM00956 BEST7003_1959 BEST7003_1975 SM00861 Transketolase, pyrimidine binding domain BEST7003_1976 SM00327 von Willebrand factor (vWF) type A domain BEST7003_1977 SM00382 ATPases associated with a variety of cellular activities BEST7003_1979 SM00257 Lysin motif BEST7003_1998 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_1998 SM00245 tail specific protease BEST7003_2005 SM00014 Acid phosphatase homologues BEST7003_2014 SM00882 Coenzyme A transferase BEST7003_2015 SM00882 Coenzyme A transferase BEST7003_2026 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_2034 SM00382 ATPases associated with a variety of cellular activities BEST7003_2044 SM00567 E-Z type HEAT repeats BEST7003_2044 SM00932 Scaffold protein Nfu/NifU N terminal BEST7003_2045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_2049 SM00357 Cold shock protein domain BEST7003_2057 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BEST7003_2057 SM00475 5'-3' exonuclease BEST7003_2069 SM00354 helix_turn _helix lactose operon repressor BEST7003_2072 SM00491 BEST7003_2072 BEST7003_2074 SM00981 BEST7003_2074 BEST7003_2078 SM00487 DEAD-like helicases superfamily BEST7003_2078 SM00490 helicase superfamily c-terminal domain BEST7003_2089 SM00478 endonuclease III BEST7003_2089 SM00525 BEST7003_2089 BEST7003_2095 SM00479 BEST7003_2095 BEST7003_2095 SM00487 DEAD-like helicases superfamily BEST7003_2095 SM00491 BEST7003_2095 BEST7003_2103 SM00851 MGS-like domain BEST7003_2113 SM00914 BEST7003_2113 BEST7003_2114 SM00028 Tetratricopeptide repeats BEST7003_2127 SM00138 Methyltransferase, chemotaxis proteins BEST7003_2128 SM00562 BEST7003_2128 BEST7003_2134 SM00411 bacterial (prokaryotic) histone like domain BEST7003_2144 SM01240 BEST7003_2144 BEST7003_2145 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_2153 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEST7003_2156 SM00257 Lysin motif BEST7003_2158 SM00487 DEAD-like helicases superfamily BEST7003_2158 SM00490 helicase superfamily c-terminal domain BEST7003_2167 SM00091 PAS domain BEST7003_2167 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_2167 SM00387 Histidine kinase-like ATPases BEST7003_2167 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_2168 SM00448 cheY-homologous receiver domain BEST7003_2168 SM00862 Transcriptional regulatory protein, C terminal BEST7003_2172 SM00363 S4 RNA-binding domain BEST7003_2175 SM00936 Penicillin-binding protein 5, C-terminal domain BEST7003_2202 SM00387 Histidine kinase-like ATPases BEST7003_2204 SM00936 Penicillin-binding protein 5, C-terminal domain BEST7003_2212 SM00919 Malic enzyme, NAD binding domain BEST7003_2212 SM01274 BEST7003_2212 BEST7003_2215 SM00870 BEST7003_2215 BEST7003_2216 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_2237 SM00849 Metallo-beta-lactamase superfamily BEST7003_2242 SM00849 Metallo-beta-lactamase superfamily BEST7003_2244 SM01350 BEST7003_2244 BEST7003_2254 SM00382 ATPases associated with a variety of cellular activities BEST7003_2256 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_2256 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BEST7003_2258 SM00046 Diacylglycerol kinase catalytic domain (presumed) BEST7003_2260 SM00422 helix_turn_helix, mercury resistance BEST7003_2262 SM00861 Transketolase, pyrimidine binding domain BEST7003_2266 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEST7003_2268 SM00091 PAS domain BEST7003_2268 SM00382 ATPases associated with a variety of cellular activities BEST7003_2277 SM00646 BEST7003_2277 BEST7003_2280 SM00448 cheY-homologous receiver domain BEST7003_2281 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_2284 SM00363 S4 RNA-binding domain BEST7003_2285 SM00861 Transketolase, pyrimidine binding domain BEST7003_2292 SM00878 Biotin carboxylase C-terminal domain BEST7003_2301 SM00382 ATPases associated with a variety of cellular activities BEST7003_2303 SM00841 Elongation factor P, C-terminal BEST7003_2303 SM01185 BEST7003_2303 BEST7003_2310 SM00529 Helix-turn-helix diphteria tox regulatory element BEST7003_2312 SM00450 Rhodanese Homology Domain BEST7003_2316 SM00487 DEAD-like helicases superfamily BEST7003_2316 SM00490 helicase superfamily c-terminal domain BEST7003_2319 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_2332 SM00382 ATPases associated with a variety of cellular activities BEST7003_2334 SM01091 Transporter associated domain BEST7003_2338 SM00849 Metallo-beta-lactamase superfamily BEST7003_2342 SM00631 BEST7003_2342 BEST7003_2346 SM00028 Tetratricopeptide repeats BEST7003_2354 SM00382 ATPases associated with a variety of cellular activities BEST7003_2355 SM00382 ATPases associated with a variety of cellular activities BEST7003_2365 SM00257 Lysin motif BEST7003_2372 SM00518 AP endonuclease family 2 BEST7003_2373 SM00487 DEAD-like helicases superfamily BEST7003_2373 SM00490 helicase superfamily c-terminal domain BEST7003_2380 SM00400 zinc finger BEST7003_2380 SM00493 BEST7003_2380 BEST7003_2383 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_2392 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_2402 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_2405 SM00271 DnaJ molecular chaperone homology domain BEST7003_2409 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_2410 SM00838 Elongation factor G C-terminus BEST7003_2418 SM00849 Metallo-beta-lactamase superfamily BEST7003_2420 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEST7003_2424 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_2426 SM01103 BEST7003_2426 BEST7003_2431 SM00644 BEST7003_2431 BEST7003_2433 SM01350 BEST7003_2433 BEST7003_2437 SM00857 Resolvase, N terminal domain BEST7003_2439 SM00226 Low molecular weight phosphatase family BEST7003_2442 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_2444 SM00028 Tetratricopeptide repeats BEST7003_2452 SM00644 BEST7003_2452 BEST7003_2464 SM00257 Lysin motif BEST7003_2491 SM00382 ATPases associated with a variety of cellular activities BEST7003_2498 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_2500 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_2501 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_2507 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_2508 SM00448 cheY-homologous receiver domain BEST7003_2508 SM00862 Transcriptional regulatory protein, C terminal BEST7003_2515 SM00450 Rhodanese Homology Domain BEST7003_2515 SM00849 Metallo-beta-lactamase superfamily BEST7003_2516 SM00450 Rhodanese Homology Domain BEST7003_2523 SM00422 helix_turn_helix, mercury resistance BEST7003_2526 SM01091 Transporter associated domain BEST7003_2538 SM00344 helix_turn_helix ASNC type BEST7003_2563 SM00287 Bacterial SH3 domain homologues BEST7003_2571 SM00422 helix_turn_helix, mercury resistance BEST7003_2573 SM00829 Enoylreductase BEST7003_2575 SM00640 Glycosyl hydrolases family 32 BEST7003_2580 SM00382 ATPases associated with a variety of cellular activities BEST7003_2594 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEST7003_2594 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEST7003_2600 SM00650 Ribosomal RNA adenine dimethylases BEST7003_2611 SM00732 Likely ribonuclease with RNase H fold. BEST7003_2613 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEST7003_2615 SM00382 ATPases associated with a variety of cellular activities BEST7003_2616 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_2616 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BEST7003_2622 SM00382 ATPases associated with a variety of cellular activities BEST7003_2623 SM00028 Tetratricopeptide repeats BEST7003_2627 SM00382 ATPases associated with a variety of cellular activities BEST7003_2632 SM00287 Bacterial SH3 domain homologues BEST7003_2632 SM00646 BEST7003_2632 BEST7003_2634 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_2634 SM00954 Region found in RelA / SpoT proteins BEST7003_2644 SM01323 BEST7003_2644 BEST7003_2648 SM00382 ATPases associated with a variety of cellular activities BEST7003_2649 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEST7003_2660 SM00257 Lysin motif BEST7003_2669 SM01317 BEST7003_2669 BEST7003_2688 SM00257 Lysin motif BEST7003_2690 SM01004 Delta-aminolevulinic acid dehydratase BEST7003_2697 SM00382 ATPases associated with a variety of cellular activities BEST7003_2697 SM00464 Found in ATP-dependent protease La (LON) BEST7003_2698 SM00382 ATPases associated with a variety of cellular activities BEST7003_2699 SM00382 ATPases associated with a variety of cellular activities BEST7003_2699 SM00994 ClpX C4-type zinc finger BEST7003_2699 SM01086 C-terminal, D2-small domain, of ClpB protein BEST7003_2704 SM01329 BEST7003_2704 BEST7003_2705 SM00917 LeuA allosteric (dimerisation) domain BEST7003_2715 SM00909 Sporulation and spore germination BEST7003_2717 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_2718 SM00421 helix_turn_helix, Lux Regulon BEST7003_2725 SM00465 GIY-YIG type nucleases (URI domain) BEST7003_2727 SM00813 Alpha-L-arabinofuranosidase C-terminus BEST7003_2728 SM00893 Electron transfer flavoprotein domain BEST7003_2729 SM00893 Electron transfer flavoprotein domain BEST7003_2734 SM00463 Small MutS-related domain BEST7003_2734 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BEST7003_2734 SM00534 ATPase domain of DNA mismatch repair MUTS family BEST7003_2735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEST7003_2735 SM00481 DNA polymerase alpha chain like domain BEST7003_2735 SM00483 DNA polymerase X family BEST7003_2739 SM00873 B3/4 domain BEST7003_2739 SM00874 tRNA synthetase B5 domain BEST7003_2739 SM00896 Ferredoxin-fold anticodon binding domain BEST7003_2741 SM00967 RNA 2'-O ribose methyltransferase substrate binding BEST7003_2749 SM00813 Alpha-L-arabinofuranosidase C-terminus BEST7003_2755 SM01007 Class II Aldolase and Adducin N-terminal domain BEST7003_2768 SM00448 cheY-homologous receiver domain BEST7003_2768 SM00850 LytTr DNA-binding domain BEST7003_2769 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEST7003_2769 SM00387 Histidine kinase-like ATPases BEST7003_2771 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEST7003_2774 SM00382 ATPases associated with a variety of cellular activities BEST7003_2778 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEST7003_2784 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BEST7003_2784 SM01232 BEST7003_2784 BEST7003_2785 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BEST7003_2785 SM00474 3'-5' exonuclease BEST7003_2785 SM00475 5'-3' exonuclease BEST7003_2785 SM00482 DNA polymerase A domain BEST7003_2786 SM00091 PAS domain BEST7003_2786 SM00387 Histidine kinase-like ATPases BEST7003_2786 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_2787 SM00448 cheY-homologous receiver domain BEST7003_2787 SM00862 Transcriptional regulatory protein, C terminal BEST7003_2789 SM01329 BEST7003_2789 BEST7003_2798 SM00919 Malic enzyme, NAD binding domain BEST7003_2798 SM01274 BEST7003_2798 BEST7003_2799 SM00481 DNA polymerase alpha chain like domain BEST7003_2805 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_2808 SM00904 Riboflavin kinase BEST7003_2812 SM00382 ATPases associated with a variety of cellular activities BEST7003_2815 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_2816 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_2819 SM00849 Metallo-beta-lactamase superfamily BEST7003_2825 SM00852 Probable molybdopterin binding domain BEST7003_2837 SM00981 BEST7003_2837 BEST7003_2843 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEST7003_2844 SM00267 diguanylate cyclase BEST7003_2845 SM00363 S4 RNA-binding domain BEST7003_2845 SM01390 BEST7003_2845 BEST7003_2847 SM00363 S4 RNA-binding domain BEST7003_2850 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_2854 SM00354 helix_turn _helix lactose operon repressor BEST7003_2855 SM00830 Chorismate mutase type II BEST7003_2860 SM00382 ATPases associated with a variety of cellular activities BEST7003_2860 SM00843 BEST7003_2860 BEST7003_2867 SM00919 Malic enzyme, NAD binding domain BEST7003_2867 SM01274 BEST7003_2867 BEST7003_2868 SM00849 Metallo-beta-lactamase superfamily BEST7003_2872 SM00642 Alpha-amylase domain BEST7003_2873 SM00046 Diacylglycerol kinase catalytic domain (presumed) BEST7003_2880 SM00382 ATPases associated with a variety of cellular activities BEST7003_2882 SM00420 helix_turn_helix, Deoxyribose operon repressor BEST7003_2883 SM00363 S4 RNA-binding domain BEST7003_2893 SM00342 helix_turn_helix, arabinose operon control protein BEST7003_2898 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_2898 SM00876 Biotin and Thiamin Synthesis associated domain BEST7003_2904 SM00354 helix_turn _helix lactose operon repressor BEST7003_2909 SM00450 Rhodanese Homology Domain BEST7003_2912 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEST7003_2912 SM00091 PAS domain BEST7003_2916 SM00382 ATPases associated with a variety of cellular activities BEST7003_2917 SM00387 Histidine kinase-like ATPases BEST7003_2918 SM00448 cheY-homologous receiver domain BEST7003_2918 SM00862 Transcriptional regulatory protein, C terminal BEST7003_2920 SM00382 ATPases associated with a variety of cellular activities BEST7003_2923 SM00382 ATPases associated with a variety of cellular activities BEST7003_2924 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_2926 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_2938 SM00382 ATPases associated with a variety of cellular activities BEST7003_2946 SM01234 BEST7003_2946 BEST7003_2947 SM00947 Carbonic anhydrase BEST7003_2954 SM00382 ATPases associated with a variety of cellular activities BEST7003_2956 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BEST7003_2964 SM00984 UDP binding domain BEST7003_2976 SM00642 Alpha-amylase domain BEST7003_2979 SM00244 prohibitin homologues BEST7003_2990 SM00047 Lysozyme subfamily 2 BEST7003_2999 SM00420 helix_turn_helix, Deoxyribose operon repressor BEST7003_2999 SM01134 BEST7003_2999 BEST7003_3000 SM01007 Class II Aldolase and Adducin N-terminal domain BEST7003_3001 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_3001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3001 SM00319 Homologues of the ligand binding domain of Tar BEST7003_3002 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_3002 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3002 SM00319 Homologues of the ligand binding domain of Tar BEST7003_3003 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_3003 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3003 SM00319 Homologues of the ligand binding domain of Tar BEST7003_3004 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_3004 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3004 SM00319 Homologues of the ligand binding domain of Tar BEST7003_3008 SM00642 Alpha-amylase domain BEST7003_3009 SM01091 Transporter associated domain BEST7003_3020 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_3022 SM00344 helix_turn_helix ASNC type BEST7003_3026 SM00387 Histidine kinase-like ATPases BEST7003_3026 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_3027 SM01298 BEST7003_3027 BEST7003_3028 SM00479 BEST7003_3028 BEST7003_3034 SM00091 PAS domain BEST7003_3034 SM00387 Histidine kinase-like ATPases BEST7003_3035 SM00448 cheY-homologous receiver domain BEST7003_3037 SM00382 ATPases associated with a variety of cellular activities BEST7003_3050 SM00421 helix_turn_helix, Lux Regulon BEST7003_3050 SM00448 cheY-homologous receiver domain BEST7003_3051 SM00387 Histidine kinase-like ATPases BEST7003_3057 SM00052 Putative diguanylate phosphodiesterase BEST7003_3066 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_3075 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BEST7003_3075 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BEST7003_3077 SM00923 MbtH-like protein BEST7003_3078 SM00823 Phosphopantetheine attachment site BEST7003_3078 SM00824 Thioesterase BEST7003_3094 SM01240 BEST7003_3094 BEST7003_3114 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_3130 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BEST7003_3137 SM00382 ATPases associated with a variety of cellular activities BEST7003_3138 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_3138 SM00866 BEST7003_3138 BEST7003_3144 SM00465 GIY-YIG type nucleases (URI domain) BEST7003_3149 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_3154 SM00382 ATPases associated with a variety of cellular activities BEST7003_3159 SM00382 ATPases associated with a variety of cellular activities BEST7003_3159 SM00930 BEST7003_3159 BEST7003_3162 SM00493 BEST7003_3162 BEST7003_3173 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3180 SM00382 ATPases associated with a variety of cellular activities BEST7003_3186 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_3187 SM00448 cheY-homologous receiver domain BEST7003_3187 SM00862 Transcriptional regulatory protein, C terminal BEST7003_3188 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3188 SM00387 Histidine kinase-like ATPases BEST7003_3188 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_3196 SM00421 helix_turn_helix, Lux Regulon BEST7003_3196 SM00448 cheY-homologous receiver domain BEST7003_3197 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3197 SM00387 Histidine kinase-like ATPases BEST7003_3204 SM00382 ATPases associated with a variety of cellular activities BEST7003_3209 SM00387 Histidine kinase-like ATPases BEST7003_3209 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_3210 SM00448 cheY-homologous receiver domain BEST7003_3210 SM00862 Transcriptional regulatory protein, C terminal BEST7003_3214 SM00835 Cupin BEST7003_3217 SM00382 ATPases associated with a variety of cellular activities BEST7003_3219 SM00382 ATPases associated with a variety of cellular activities BEST7003_3251 SM00316 Ribosomal protein S1-like RNA-binding domain BEST7003_3251 SM00357 Cold shock protein domain BEST7003_3251 SM00955 BEST7003_3251 BEST7003_3255 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_3256 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_3257 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_3259 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BEST7003_3259 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3263 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_3263 SM00382 ATPases associated with a variety of cellular activities BEST7003_3266 SM00752 Horizontally Transferred TransMembrane Domain BEST7003_3269 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEST7003_3273 SM00116 Domain in cystathionine beta-synthase and other proteins. BEST7003_3273 SM00382 ATPases associated with a variety of cellular activities BEST7003_3280 SM01192 BEST7003_3280 BEST7003_3280 SM01193 BEST7003_3280 BEST7003_3284 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEST7003_3287 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_3292 SM00636 BEST7003_3292 BEST7003_3296 SM00421 helix_turn_helix, Lux Regulon BEST7003_3296 SM00448 cheY-homologous receiver domain BEST7003_3299 SM00382 ATPases associated with a variety of cellular activities BEST7003_3301 SM00331 Sigma factor PP2C-like phosphatases BEST7003_3307 SM00354 helix_turn _helix lactose operon repressor BEST7003_3308 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_3308 SM00895 BEST7003_3308 BEST7003_3325 SM00530 Helix-turn-helix XRE-family like proteins BEST7003_3333 SM00640 Glycosyl hydrolases family 32 BEST7003_3343 SM00642 Alpha-amylase domain BEST7003_3349 SM00642 Alpha-amylase domain BEST7003_3350 SM00354 helix_turn _helix lactose operon repressor BEST7003_3354 SM00947 Carbonic anhydrase BEST7003_3357 SM00382 ATPases associated with a variety of cellular activities BEST7003_3358 SM00387 Histidine kinase-like ATPases BEST7003_3359 SM00448 cheY-homologous receiver domain BEST7003_3359 SM00862 Transcriptional regulatory protein, C terminal BEST7003_3369 SM00028 Tetratricopeptide repeats BEST7003_3370 SM00382 ATPases associated with a variety of cellular activities BEST7003_3391 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_3391 SM00866 BEST7003_3391 BEST7003_3393 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3396 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3404 SM00382 ATPases associated with a variety of cellular activities BEST7003_3405 SM00487 DEAD-like helicases superfamily BEST7003_3405 SM00490 helicase superfamily c-terminal domain BEST7003_3410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_3412 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_3412 SM00245 tail specific protease BEST7003_3414 SM00382 ATPases associated with a variety of cellular activities BEST7003_3417 SM00937 BEST7003_3417 BEST7003_3418 SM00957 SecA DEAD-like domain BEST7003_3418 SM00958 SecA preprotein cross-linking domain BEST7003_3435 SM00487 DEAD-like helicases superfamily BEST7003_3435 SM00490 helicase superfamily c-terminal domain BEST7003_3437 SM00421 helix_turn_helix, Lux Regulon BEST7003_3437 SM00448 cheY-homologous receiver domain BEST7003_3438 SM00387 Histidine kinase-like ATPases BEST7003_3446 SM00984 UDP binding domain BEST7003_3450 SM00646 BEST7003_3450 BEST7003_3460 SM00382 ATPases associated with a variety of cellular activities BEST7003_3468 SM00047 Lysozyme subfamily 2 BEST7003_3468 SM00287 Bacterial SH3 domain homologues BEST7003_3478 SM00854 Bacterial capsule synthesis protein PGA_cap BEST7003_3481 SM00354 helix_turn _helix lactose operon repressor BEST7003_3484 SM00382 ATPases associated with a variety of cellular activities BEST7003_3487 SM00287 Bacterial SH3 domain homologues BEST7003_3498 SM00903 Flavin reductase like domain BEST7003_3501 SM00344 helix_turn_helix ASNC type BEST7003_3513 SM00984 UDP binding domain BEST7003_3519 SM00487 DEAD-like helicases superfamily BEST7003_3519 SM00490 helicase superfamily c-terminal domain BEST7003_3521 SM00420 helix_turn_helix, Deoxyribose operon repressor BEST7003_3521 SM01134 BEST7003_3521 BEST7003_3527 SM00387 Histidine kinase-like ATPases BEST7003_3530 SM00028 Tetratricopeptide repeats BEST7003_3535 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3537 SM00710 Parallel beta-helix repeats BEST7003_3537 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BEST7003_3543 SM00938 Nitrogen regulatory protein P-II BEST7003_3544 SM00014 Acid phosphatase homologues BEST7003_3550 SM00155 Phospholipase D. Active site motifs. BEST7003_3551 SM00422 helix_turn_helix, mercury resistance BEST7003_3562 SM00028 Tetratricopeptide repeats BEST7003_3563 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_3566 SM00327 von Willebrand factor (vWF) type A domain BEST7003_3567 SM00327 von Willebrand factor (vWF) type A domain BEST7003_3575 SM00382 ATPases associated with a variety of cellular activities BEST7003_3587 SM00226 Low molecular weight phosphatase family BEST7003_3595 SM00937 BEST7003_3595 BEST7003_3599 SM00919 Malic enzyme, NAD binding domain BEST7003_3599 SM01274 BEST7003_3599 BEST7003_3602 SM00357 Cold shock protein domain BEST7003_3602 SM00382 ATPases associated with a variety of cellular activities BEST7003_3602 SM00959 Rho termination factor, N-terminal domain BEST7003_3607 SM00448 cheY-homologous receiver domain BEST7003_3613 SM00155 Phospholipase D. Active site motifs. BEST7003_3617 SM00382 ATPases associated with a variety of cellular activities BEST7003_3618 SM00155 Phospholipase D. Active site motifs. BEST7003_3622 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEST7003_3625 SM00100 Cyclic nucleotide-monophosphate binding domain BEST7003_3625 SM00419 helix_turn_helix, cAMP Regulatory protein BEST7003_3627 SM00836 DALR anticodon binding domain BEST7003_3627 SM01016 Arginyl tRNA synthetase N terminal dom BEST7003_3630 SM00729 Elongator protein 3, MiaB family, Radical SAM BEST7003_3639 SM00028 Tetratricopeptide repeats BEST7003_3648 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3649 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEST7003_3653 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEST7003_3672 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEST7003_3680 SM00858 BEST7003_3680 BEST7003_3690 SM00986 Uracil DNA glycosylase superfamily BEST7003_3690 SM00987 UreE urease accessory protein, C-terminal domain BEST7003_3697 SM00640 Glycosyl hydrolases family 32 BEST7003_3700 SM01061 CAT RNA binding domain BEST7003_3730 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BEST7003_3736 SM01061 CAT RNA binding domain BEST7003_3739 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3740 SM00363 S4 RNA-binding domain BEST7003_3742 SM00954 Region found in RelA / SpoT proteins BEST7003_3757 SM01060 BEST7003_3757 BEST7003_3760 SM00382 ATPases associated with a variety of cellular activities BEST7003_3767 SM00382 ATPases associated with a variety of cellular activities BEST7003_3768 SM00382 ATPases associated with a variety of cellular activities BEST7003_3775 SM00382 ATPases associated with a variety of cellular activities BEST7003_3785 SM00421 helix_turn_helix, Lux Regulon BEST7003_3785 SM00448 cheY-homologous receiver domain BEST7003_3791 SM00822 BEST7003_3791 BEST7003_3792 SM00882 Coenzyme A transferase BEST7003_3793 SM00882 Coenzyme A transferase BEST7003_3800 SM01060 BEST7003_3800 BEST7003_3803 SM01061 CAT RNA binding domain BEST7003_3806 SM00487 DEAD-like helicases superfamily BEST7003_3806 SM00490 helicase superfamily c-terminal domain BEST7003_3825 SM00860 SMI1 / KNR4 family BEST7003_3837 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BEST7003_3839 SM01133 BEST7003_3839 BEST7003_3845 SM00382 ATPases associated with a variety of cellular activities BEST7003_3847 SM00062 Bacterial periplasmic substrate-binding proteins BEST7003_3861 SM00382 ATPases associated with a variety of cellular activities BEST7003_3862 SM00387 Histidine kinase-like ATPases BEST7003_3863 SM00448 cheY-homologous receiver domain BEST7003_3863 SM00862 Transcriptional regulatory protein, C terminal BEST7003_3874 SM00420 helix_turn_helix, Deoxyribose operon repressor BEST7003_3874 SM01134 BEST7003_3874 BEST7003_3879 SM00387 Histidine kinase-like ATPases BEST7003_3885 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BEST7003_3891 SM00564 beta-propeller repeat BEST7003_3898 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3903 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_3903 SM00895 BEST7003_3903 BEST7003_3906 SM01350 BEST7003_3906 BEST7003_3911 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEST7003_3911 SM00866 BEST7003_3911 BEST7003_3914 SM00382 ATPases associated with a variety of cellular activities BEST7003_3935 SM00091 PAS domain BEST7003_3935 SM00382 ATPases associated with a variety of cellular activities BEST7003_3937 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEST7003_3938 SM00849 Metallo-beta-lactamase superfamily BEST7003_3941 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BEST7003_3941 SM00091 PAS domain BEST7003_3941 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEST7003_3941 SM00387 Histidine kinase-like ATPases BEST7003_3941 SM00388 His Kinase A (phosphoacceptor) domain BEST7003_3942 SM00448 cheY-homologous receiver domain BEST7003_3942 SM00862 Transcriptional regulatory protein, C terminal BEST7003_3943 SM00788 Adenylosuccinate synthetase BEST7003_3945 SM00382 ATPases associated with a variety of cellular activities BEST7003_3952 SM00267 diguanylate cyclase BEST7003_3957 SM01131 BEST7003_3957 BEST7003_3967 SM00382 ATPases associated with a variety of cellular activities BEST7003_3975 SM00849 Metallo-beta-lactamase superfamily BEST7003_3976 SM00347 helix_turn_helix multiple antibiotic resistance protein BEST7003_3984 SM00422 helix_turn_helix, mercury resistance BEST7003_3989 SM01266 BEST7003_3989 BEST7003_3991 SM00354 helix_turn _helix lactose operon repressor BEST7003_3997 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEST7003_4001 SM00470 ParB-like nuclease domain BEST7003_4004 SM00470 ParB-like nuclease domain BEST7003_4006 SM01228 BEST7003_4006 BEST7003_4008 SM00322 K homology RNA-binding domain BEST7003_4008 SM00393 Putative single-stranded nucleic acids-binding domain BEST7003_4008 SM01245 BEST7003_4008