locus-tag class description BEST7613_0001 PF00308 Bacterial dnaA protein BEST7613_0001 PF08299 Bacterial dnaA protein helix-turn-helix BEST7613_0001 PF11638 DnaA N-terminal domain BEST7613_0002 PF02767 DNA polymerase III beta subunit, central domain BEST7613_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BEST7613_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BEST7613_0004 PF02463 RecF/RecN/SMC N terminal domain BEST7613_0005 PF04025 Domain of unknown function (DUF370) BEST7613_0006 PF00204 DNA gyrase B BEST7613_0006 PF00986 DNA gyrase B subunit, carboxyl terminus BEST7613_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0006 PF01751 Toprim domain BEST7613_0007 PF00521 DNA gyrase/topoisomerase IV, subunit A BEST7613_0007 PF03989 DNA gyrase C-terminal domain, beta-propeller BEST7613_0008 PF14175 YaaC-like Protein BEST7613_0009 PF00478 IMP dehydrogenase / GMP reductase domain BEST7613_0009 PF00571 CBS domain BEST7613_0010 PF00768 D-alanyl-D-alanine carboxypeptidase BEST7613_0010 PF07943 Penicillin-binding protein 5, C-terminal domain BEST7613_0011 PF01680 SOR/SNZ family BEST7613_0012 PF01174 SNO glutamine amidotransferase family BEST7613_0013 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEST7613_0013 PF02403 Seryl-tRNA synthetase N-terminal domain BEST7613_0014 PF01712 Deoxynucleoside kinase BEST7613_0015 PF01712 Deoxynucleoside kinase BEST7613_0016 PF00704 Glycosyl hydrolases family 18 BEST7613_0016 PF01476 LysM domain BEST7613_0017 PF00857 Isochorismatase family BEST7613_0018 PF14437 MafB19-like deaminase BEST7613_0019 PF12169 DNA polymerase III subunits gamma and tau domain III BEST7613_0020 PF02575 YbaB/EbfC DNA-binding family BEST7613_0021 PF13662 Toprim domain BEST7613_0021 PF02132 RecR protein BEST7613_0022 PF10704 Protein of unknown function (DUF2508) BEST7613_0023 PF07441 SigmaK-factor processing regulatory protein BofA BEST7613_0024 PF10764 Inhibitor of sigma-G Gin BEST7613_0025 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein BEST7613_0026 PF05816 Toxic anion resistance protein (TelA) BEST7613_0027 PF01276 Orn/Lys/Arg decarboxylase, major domain BEST7613_0027 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BEST7613_0028 PF02223 Thymidylate kinase BEST7613_0029 PF06153 Cyclic-di-AMP receptor BEST7613_0030 PF03885 Protein of unknown function (DUF327) BEST7613_0031 PF09115 DNA polymerase III, delta subunit, C terminal BEST7613_0032 PF04468 PSP1 C-terminal conserved region BEST7613_0033 PF06156 Initiation control protein YabA BEST7613_0034 PF05175 Methyltransferase small domain BEST7613_0035 PF01541 GIY-YIG catalytic domain BEST7613_0036 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_0037 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BEST7613_0037 PF18277 AbrB C-terminal domain BEST7613_0038 PF01588 Putative tRNA binding domain BEST7613_0038 PF08264 Anticodon-binding domain of tRNA BEST7613_0038 PF09334 tRNA synthetases class I (M) BEST7613_0039 PF01026 TatD related DNase BEST7613_0040 PF03990 G5-linked-Ubiquitin-like domain BEST7613_0040 PF07501 G5 domain BEST7613_0040 PF06725 3D domain BEST7613_0041 PF13662 Toprim domain BEST7613_0041 PF13331 Domain of unknown function (DUF4093) BEST7613_0042 PF00398 Ribosomal RNA adenine dimethylase BEST7613_0043 PF05582 YabG peptidase U57 BEST7613_0044 PF06257 Biofilm formation stimulator VEG BEST7613_0045 PF00269 Small, acid-soluble spore proteins, alpha/beta type BEST7613_0046 PF08544 GHMP kinases C terminal BEST7613_0046 PF00288 GHMP kinases N terminal domain BEST7613_0047 PF09182 Bacterial purine repressor, N-terminal BEST7613_0047 PF00156 Phosphoribosyl transferase domain BEST7613_0048 PF01042 Endoribonuclease L-PSP BEST7613_0049 PF04026 SpoVG BEST7613_0050 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_0050 PF00483 Nucleotidyl transferase BEST7613_0051 PF14572 Phosphoribosyl synthetase-associated domain BEST7613_0051 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BEST7613_0052 PF14693 Ribosomal protein TL5, C-terminal domain BEST7613_0052 PF01386 Ribosomal L25p family BEST7613_0053 PF01195 Peptidyl-tRNA hydrolase BEST7613_0054 PF10955 Protein of unknown function (DUF2757) BEST7613_0055 PF17757 UvrB interaction domain BEST7613_0055 PF00271 Helicase conserved C-terminal domain BEST7613_0055 PF02559 CarD-like/TRCF domain BEST7613_0055 PF00270 DEAD/DEAH box helicase BEST7613_0055 PF03461 TRCF domain BEST7613_0056 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BEST7613_0056 PF15714 Stage V sporulation protein T C-terminal, transcription factor BEST7613_0057 PF14667 Polysaccharide biosynthesis C-terminal domain BEST7613_0057 PF01943 Polysaccharide biosynthesis protein BEST7613_0058 PF03819 MazG nucleotide pyrophosphohydrolase domain BEST7613_0058 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_0059 PF01479 S4 domain BEST7613_0060 PF07873 YabP family BEST7613_0061 PF09578 Spore cortex protein YabQ (Spore_YabQ) BEST7613_0062 PF04977 Septum formation initiator BEST7613_0063 PF00575 S1 RNA binding domain BEST7613_0064 PF07228 Stage II sporulation protein E (SpoIIE) BEST7613_0065 PF00092 von Willebrand factor type A domain BEST7613_0066 PF00069 Protein kinase domain BEST7613_0067 PF11734 TilS substrate C-terminal domain BEST7613_0067 PF09179 TilS substrate binding domain BEST7613_0067 PF01171 PP-loop family BEST7613_0069 PF17862 AAA+ lid domain BEST7613_0069 PF01434 Peptidase family M41 BEST7613_0069 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_0069 PF06480 FtsH Extracellular BEST7613_0070 PF03309 Type III pantothenate kinase BEST7613_0071 PF01430 Hsp33 protein BEST7613_0072 PF13145 PPIC-type PPIASE domain BEST7613_0073 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_0074 PF00425 chorismate binding enzyme BEST7613_0074 PF04715 Anthranilate synthase component I, N terminal region BEST7613_0075 PF00117 Glutamine amidotransferase class-I BEST7613_0076 PF01063 Amino-transferase class IV BEST7613_0077 PF00809 Pterin binding enzyme BEST7613_0078 PF02152 Dihydroneopterin aldolase BEST7613_0079 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BEST7613_0080 PF01381 Helix-turn-helix BEST7613_0081 PF01207 Dihydrouridine synthase (Dus) BEST7613_0082 PF01336 OB-fold nucleic acid binding domain BEST7613_0082 PF00152 tRNA synthetases class II (D, K and N) BEST7613_0083 PF17727 CtsR C-terminal dimerization domain BEST7613_0083 PF05848 CtsR N-terminal HTH domain BEST7613_0084 PF02151 UvrB/uvrC motif BEST7613_0085 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BEST7613_0086 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_0086 PF07724 AAA domain (Cdc48 subfamily) BEST7613_0086 PF17871 AAA lid domain BEST7613_0086 PF02861 Clp amino terminal domain, pathogenicity island component BEST7613_0086 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_0087 PF18073 Rubredoxin metal binding domain BEST7613_0088 PF02457 DisA bacterial checkpoint controller nucleotide-binding BEST7613_0088 PF10635 DisA bacterial checkpoint controller linker region BEST7613_0090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BEST7613_0091 PF02542 YgbB family BEST7613_0092 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEST7613_0093 PF06426 Serine acetyltransferase, N-terminal BEST7613_0093 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_0094 PF01406 tRNA synthetases class I (C) catalytic domain BEST7613_0094 PF09190 DALR domain BEST7613_0095 PF00636 Ribonuclease III domain BEST7613_0096 PF00588 SpoU rRNA Methylase family BEST7613_0096 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEST7613_0097 PF05991 YacP-like NYN domain BEST7613_0098 PF08281 Sigma-70, region 4 BEST7613_0098 PF04542 Sigma-70 region 2 BEST7613_0099 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BEST7613_0100 PF00467 KOW motif BEST7613_0100 PF02357 Transcription termination factor nusG BEST7613_0101 PF00298 Ribosomal protein L11, RNA binding domain BEST7613_0101 PF03946 Ribosomal protein L11, N-terminal domain BEST7613_0102 PF00687 Ribosomal protein L1p/L10e family BEST7613_0103 PF00466 Ribosomal protein L10 BEST7613_0104 PF16320 Ribosomal protein L7/L12 dimerisation domain BEST7613_0104 PF00542 Ribosomal protein L7/L12 C-terminal domain BEST7613_0105 PF05175 Methyltransferase small domain BEST7613_0106 PF00562 RNA polymerase Rpb2, domain 6 BEST7613_0106 PF10385 RNA polymerase beta subunit external 1 domain BEST7613_0106 PF04563 RNA polymerase beta subunit BEST7613_0106 PF04561 RNA polymerase Rpb2, domain 2 BEST7613_0106 PF04560 RNA polymerase Rpb2, domain 7 BEST7613_0106 PF04565 RNA polymerase Rpb2, domain 3 BEST7613_0107 PF04983 RNA polymerase Rpb1, domain 3 BEST7613_0107 PF00623 RNA polymerase Rpb1, domain 2 BEST7613_0107 PF05000 RNA polymerase Rpb1, domain 4 BEST7613_0107 PF04997 RNA polymerase Rpb1, domain 1 BEST7613_0107 PF04998 RNA polymerase Rpb1, domain 5 BEST7613_0108 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BEST7613_0109 PF00164 Ribosomal protein S12/S23 BEST7613_0110 PF00177 Ribosomal protein S7p/S5e BEST7613_0111 PF14492 Elongation Factor G, domain II BEST7613_0111 PF03764 Elongation factor G, domain IV BEST7613_0111 PF00009 Elongation factor Tu GTP binding domain BEST7613_0111 PF03144 Elongation factor Tu domain 2 BEST7613_0111 PF00679 Elongation factor G C-terminus BEST7613_0112 PF03144 Elongation factor Tu domain 2 BEST7613_0112 PF00009 Elongation factor Tu GTP binding domain BEST7613_0112 PF03143 Elongation factor Tu C-terminal domain BEST7613_0113 PF12146 Serine aminopeptidase, S33 BEST7613_0114 PF00338 Ribosomal protein S10p/S20e BEST7613_0115 PF00297 Ribosomal protein L3 BEST7613_0116 PF00573 Ribosomal protein L4/L1 family BEST7613_0117 PF00276 Ribosomal protein L23 BEST7613_0118 PF03947 Ribosomal Proteins L2, C-terminal domain BEST7613_0118 PF00181 Ribosomal Proteins L2, RNA binding domain BEST7613_0119 PF00203 Ribosomal protein S19 BEST7613_0120 PF00237 Ribosomal protein L22p/L17e BEST7613_0121 PF00189 Ribosomal protein S3, C-terminal domain BEST7613_0121 PF07650 KH domain BEST7613_0122 PF00252 Ribosomal protein L16p/L10e BEST7613_0123 PF00831 Ribosomal L29 protein BEST7613_0124 PF00366 Ribosomal protein S17 BEST7613_0125 PF00238 Ribosomal protein L14p/L23e BEST7613_0126 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BEST7613_0126 PF00467 KOW motif BEST7613_0127 PF00281 Ribosomal protein L5 BEST7613_0127 PF00673 ribosomal L5P family C-terminus BEST7613_0128 PF00253 Ribosomal protein S14p/S29e BEST7613_0129 PF00410 Ribosomal protein S8 BEST7613_0130 PF00347 Ribosomal protein L6 BEST7613_0131 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BEST7613_0132 PF00333 Ribosomal protein S5, N-terminal domain BEST7613_0132 PF03719 Ribosomal protein S5, C-terminal domain BEST7613_0133 PF00327 Ribosomal protein L30p/L7e BEST7613_0134 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BEST7613_0135 PF00344 SecY translocase BEST7613_0136 PF05191 Adenylate kinase, active site lid BEST7613_0137 PF00557 Metallopeptidase family M24 BEST7613_0138 PF01176 Translation initiation factor 1A / IF-1 BEST7613_0139 PF00416 Ribosomal protein S13/S18 BEST7613_0140 PF00411 Ribosomal protein S11 BEST7613_0141 PF01000 RNA polymerase Rpb3/RpoA insert domain BEST7613_0141 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BEST7613_0141 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BEST7613_0142 PF01196 Ribosomal protein L17 BEST7613_0143 PF00005 ABC transporter BEST7613_0144 PF00005 ABC transporter BEST7613_0145 PF02361 Cobalt transport protein BEST7613_0146 PF01416 tRNA pseudouridine synthase BEST7613_0147 PF00572 Ribosomal protein L13 BEST7613_0148 PF00380 Ribosomal protein S9/S16 BEST7613_0149 PF08241 Methyltransferase domain BEST7613_0150 PF10730 Protein of unknown function (DUF2521) BEST7613_0151 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_0152 PF10609 NUBPL iron-transfer P-loop NTPase BEST7613_0153 PF17898 Spore germination GerD central core domain BEST7613_0154 PF14089 KinB-signalling pathway activation in sporulation BEST7613_0155 PF01522 Polysaccharide deacetylase BEST7613_0156 PF01740 STAS domain BEST7613_0156 PF00916 Sulfate permease family BEST7613_0158 PF01758 Sodium Bile acid symporter family BEST7613_0159 PF00756 Putative esterase BEST7613_0160 PF01032 FecCD transport family BEST7613_0161 PF01032 FecCD transport family BEST7613_0162 PF01497 Periplasmic binding protein BEST7613_0163 PF12833 Helix-turn-helix domain BEST7613_0163 PF01497 Periplasmic binding protein BEST7613_0164 PF07075 Protein of unknown function (DUF1343) BEST7613_0165 PF01915 Glycosyl hydrolase family 3 C-terminal domain BEST7613_0165 PF00933 Glycosyl hydrolase family 3 N terminal domain BEST7613_0166 PF00144 Beta-lactamase BEST7613_0167 PF00367 phosphotransferase system, EIIB BEST7613_0167 PF02378 Phosphotransferase system, EIIC BEST7613_0168 PF01418 Helix-turn-helix domain, rpiR family BEST7613_0168 PF01380 SIS domain BEST7613_0169 PF01380 SIS domain BEST7613_0171 PF04463 Protein of unknown function (DUF523) BEST7613_0172 PF04542 Sigma-70 region 2 BEST7613_0172 PF08281 Sigma-70, region 4 BEST7613_0173 PF13490 Putative zinc-finger BEST7613_0174 PF02457 DisA bacterial checkpoint controller nucleotide-binding BEST7613_0175 PF07949 YbbR-like protein BEST7613_0176 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEST7613_0176 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEST7613_0176 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEST7613_0176 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEST7613_0177 PF01380 SIS domain BEST7613_0179 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BEST7613_0179 PF00730 HhH-GPD superfamily base excision DNA repair protein BEST7613_0180 PF12833 Helix-turn-helix domain BEST7613_0180 PF02805 Metal binding domain of Ada BEST7613_0181 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEST7613_0181 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEST7613_0182 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEST7613_0182 PF00361 Proton-conducting membrane transporter BEST7613_0183 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BEST7613_0186 PF10057 Uncharacterized conserved protein (DUF2294) BEST7613_0189 PF07690 Major Facilitator Superfamily BEST7613_0192 PF13186 Iron-sulfur cluster-binding domain BEST7613_0192 PF04055 Radical SAM superfamily BEST7613_0193 PF02517 CPBP intramembrane metalloprotease BEST7613_0194 PF00005 ABC transporter BEST7613_0197 PF13905 Thioredoxin-like BEST7613_0198 PF00561 alpha/beta hydrolase fold BEST7613_0199 PF00072 Response regulator receiver domain BEST7613_0199 PF00486 Transcriptional regulatory protein, C terminal BEST7613_0200 PF00672 HAMP domain BEST7613_0200 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_0202 PF00069 Protein kinase domain BEST7613_0204 PF16226 Domain of unknown function (DUF4885) BEST7613_0205 PF00324 Amino acid permease BEST7613_0206 PF17334 Minor curli fiber component A BEST7613_0207 PF17340 Family of unknown function (DUF5370) BEST7613_0208 PF00905 Penicillin binding protein transpeptidase domain BEST7613_0209 PF00067 Cytochrome P450 BEST7613_0211 PF13520 Amino acid permease BEST7613_0212 PF03009 Glycerophosphoryl diester phosphodiesterase family BEST7613_0213 PF07690 Major Facilitator Superfamily BEST7613_0214 PF10852 Protein of unknown function (DUF2651) BEST7613_0215 PF00583 Acetyltransferase (GNAT) family BEST7613_0215 PF01047 MarR family BEST7613_0216 PF07690 Major Facilitator Superfamily BEST7613_0219 PF08924 Domain of unknown function (DUF1906) BEST7613_0219 PF01471 Putative peptidoglycan binding domain BEST7613_0220 PF00892 EamA-like transporter family BEST7613_0221 PF12833 Helix-turn-helix domain BEST7613_0221 PF02311 AraC-like ligand binding domain BEST7613_0222 PF02222 ATP-grasp domain BEST7613_0223 PF00089 Trypsin BEST7613_0224 PF10794 Protein of unknown function (DUF2606) BEST7613_0225 PF12697 Alpha/beta hydrolase family BEST7613_0226 PF01066 CDP-alcohol phosphatidyltransferase BEST7613_0227 PF09335 SNARE associated Golgi protein BEST7613_0228 PF02666 Phosphatidylserine decarboxylase BEST7613_0230 PF05139 Erythromycin esterase BEST7613_0231 PF12833 Helix-turn-helix domain BEST7613_0233 PF00375 Sodium:dicarboxylate symporter family BEST7613_0234 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BEST7613_0234 PF00367 phosphotransferase system, EIIB BEST7613_0234 PF02378 Phosphotransferase system, EIIC BEST7613_0235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BEST7613_0237 PF07853 Protein of unknown function (DUF1648) BEST7613_0238 PF01063 Amino-transferase class IV BEST7613_0239 PF00324 Amino acid permease BEST7613_0240 PF02574 Homocysteine S-methyltransferase BEST7613_0241 PF01235 Sodium:alanine symporter family BEST7613_0242 PF04960 Glutaminase BEST7613_0243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0244 PF08664 YcbB domain BEST7613_0244 PF00072 Response regulator receiver domain BEST7613_0245 PF00701 Dihydrodipicolinate synthetase family BEST7613_0246 PF00171 Aldehyde dehydrogenase family BEST7613_0247 PF07690 Major Facilitator Superfamily BEST7613_0248 PF13378 Enolase C-terminal domain-like BEST7613_0249 PF07729 FCD domain BEST7613_0249 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0250 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BEST7613_0250 PF08666 SAF domain BEST7613_0251 PF01636 Phosphotransferase enzyme family BEST7613_0252 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein BEST7613_0253 PF00892 EamA-like transporter family BEST7613_0254 PF00486 Transcriptional regulatory protein, C terminal BEST7613_0254 PF00072 Response regulator receiver domain BEST7613_0255 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_0255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0256 PF00005 ABC transporter BEST7613_0258 PF10710 Protein of unknown function (DUF2512) BEST7613_0259 PF07486 Cell Wall Hydrolase BEST7613_0260 PF10138 vWA found in TerF C terminus BEST7613_0261 PF16655 PhoD-like phosphatase, N-terminal domain BEST7613_0261 PF09423 PhoD-like phosphatase BEST7613_0262 PF02416 mttA/Hcf106 family BEST7613_0263 PF00902 Sec-independent protein translocase protein (TatC) BEST7613_0264 PF01470 Pyroglutamyl peptidase BEST7613_0265 PF00266 Aminotransferase class-V BEST7613_0266 PF07690 Major Facilitator Superfamily BEST7613_0267 PF00440 Bacterial regulatory proteins, tetR family BEST7613_0268 PF17763 Glutaminase/Asparaginase C-terminal domain BEST7613_0268 PF00710 Asparaginase, N-terminal BEST7613_0269 PF01674 Lipase (class 2) BEST7613_0270 PF06271 RDD family BEST7613_0271 PF05225 helix-turn-helix, Psq domain BEST7613_0271 PF02810 SEC-C motif BEST7613_0272 PF14501 GHKL domain BEST7613_0273 PF00072 Response regulator receiver domain BEST7613_0273 PF04397 LytTr DNA-binding domain BEST7613_0274 PF00005 ABC transporter BEST7613_0275 PF12679 ABC-2 family transporter protein BEST7613_0276 PF00248 Aldo/keto reductase family BEST7613_0277 PF17118 Domain of unknown function (DUF5105) BEST7613_0277 PF11611 Domain of unknown function (DUF4352) BEST7613_0278 PF16244 Domain of unknown function (DUF4901) BEST7613_0279 PF16244 Domain of unknown function (DUF4901) BEST7613_0280 PF13539 D-alanyl-D-alanine carboxypeptidase BEST7613_0281 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_0283 PF00128 Alpha amylase, catalytic domain BEST7613_0284 PF01297 Zinc-uptake complex component A periplasmic BEST7613_0285 PF00005 ABC transporter BEST7613_0286 PF00950 ABC 3 transport family BEST7613_0287 PF00296 Luciferase-like monooxygenase BEST7613_0288 PF02342 TerD domain BEST7613_0289 PF02342 TerD domain BEST7613_0290 PF02342 TerD domain BEST7613_0291 PF03741 Integral membrane protein TerC family BEST7613_0292 PF14266 Putative component of 'biosynthetic module' BEST7613_0293 PF05816 Toxic anion resistance protein (TelA) BEST7613_0294 PF07690 Major Facilitator Superfamily BEST7613_0295 PF07690 Major Facilitator Superfamily BEST7613_0297 PF00005 ABC transporter BEST7613_0297 PF00571 CBS domain BEST7613_0298 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0299 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BEST7613_0300 PF07687 Peptidase dimerisation domain BEST7613_0300 PF01546 Peptidase family M20/M25/M40 BEST7613_0301 PF03606 C4-dicarboxylate anaerobic carrier BEST7613_0303 PF16738 Starch-binding module 26 BEST7613_0303 PF00128 Alpha amylase, catalytic domain BEST7613_0304 PF00056 lactate/malate dehydrogenase, NAD binding domain BEST7613_0304 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BEST7613_0305 PF02652 L-lactate permease BEST7613_0306 PF07690 Major Facilitator Superfamily BEST7613_0307 PF01047 MarR family BEST7613_0308 PF01810 LysE type translocator BEST7613_0309 PF08892 YqcI/YcgG family BEST7613_0310 PF00324 Amino acid permease BEST7613_0311 PF09347 Domain of unknown function (DUF1989) BEST7613_0312 PF02540 NAD synthase BEST7613_0314 PF01202 Shikimate kinase BEST7613_0315 PF08241 Methyltransferase domain BEST7613_0316 PF03466 LysR substrate binding domain BEST7613_0316 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_0317 PF05448 Acetyl xylan esterase (AXE1) BEST7613_0318 PF10127 RNA repair pathway DNA polymerase beta family BEST7613_0319 PF01619 Proline dehydrogenase BEST7613_0320 PF00171 Aldehyde dehydrogenase family BEST7613_0321 PF00474 Sodium:solute symporter family BEST7613_0322 PF17853 GGDEF-like domain BEST7613_0322 PF13556 PucR C-terminal helix-turn-helix domain BEST7613_0323 PF09323 Domain of unknown function (DUF1980) BEST7613_0324 PF03773 Predicted permease BEST7613_0325 PF00561 alpha/beta hydrolase fold BEST7613_0326 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_0327 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_0328 PF00355 Rieske [2Fe-2S] domain BEST7613_0329 PF04324 BFD-like [2Fe-2S] binding domain BEST7613_0329 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEST7613_0329 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEST7613_0329 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_0329 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEST7613_0330 PF00384 Molybdopterin oxidoreductase BEST7613_0330 PF01568 Molydopterin dinucleotide binding domain BEST7613_0330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEST7613_0331 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEST7613_0331 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_0331 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEST7613_0331 PF04324 BFD-like [2Fe-2S] binding domain BEST7613_0332 PF07690 Major Facilitator Superfamily BEST7613_0333 PF02649 Type I GTP cyclohydrolase folE2 BEST7613_0334 PF03734 L,D-transpeptidase catalytic domain BEST7613_0335 PF07683 Cobalamin synthesis protein cobW C-terminal domain BEST7613_0335 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEST7613_0336 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0337 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_0339 PF06271 RDD family BEST7613_0340 PF10925 Protein of unknown function (DUF2680) BEST7613_0341 PF00232 Glycosyl hydrolase family 1 BEST7613_0342 PF11033 Competence protein J (ComJ) BEST7613_0343 PF14040 Deoxyribonuclease NucA/NucB BEST7613_0344 PF00672 HAMP domain BEST7613_0344 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_0344 PF17202 Single cache domain 3 BEST7613_0345 PF01380 SIS domain BEST7613_0346 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BEST7613_0347 PF01638 HxlR-like helix-turn-helix BEST7613_0348 PF00668 Condensation domain BEST7613_0348 PF00550 Phosphopantetheine attachment site BEST7613_0348 PF13193 AMP-binding enzyme C-terminal domain BEST7613_0348 PF00501 AMP-binding enzyme BEST7613_0349 PF13193 AMP-binding enzyme C-terminal domain BEST7613_0349 PF00501 AMP-binding enzyme BEST7613_0349 PF00550 Phosphopantetheine attachment site BEST7613_0349 PF00668 Condensation domain BEST7613_0350 PF00975 Thioesterase domain BEST7613_0350 PF00668 Condensation domain BEST7613_0350 PF13193 AMP-binding enzyme C-terminal domain BEST7613_0350 PF00501 AMP-binding enzyme BEST7613_0350 PF00550 Phosphopantetheine attachment site BEST7613_0351 PF00975 Thioesterase domain BEST7613_0352 PF07690 Major Facilitator Superfamily BEST7613_0353 PF14317 YcxB-like protein BEST7613_0354 PF00892 EamA-like transporter family BEST7613_0355 PF00155 Aminotransferase class I and II BEST7613_0355 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0356 PF01648 4'-phosphopantetheinyl transferase superfamily BEST7613_0357 PF01648 4'-phosphopantetheinyl transferase superfamily BEST7613_0359 PF00005 ABC transporter BEST7613_0360 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0361 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_0362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_0362 PF03466 LysR substrate binding domain BEST7613_0363 PF02441 Flavoprotein BEST7613_0364 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BEST7613_0367 PF00561 alpha/beta hydrolase fold BEST7613_0368 PF00854 POT family BEST7613_0369 PF12708 Pectate lyase superfamily protein BEST7613_0369 PF13229 Right handed beta helix region BEST7613_0371 PF03323 Bacillus/Clostridium GerA spore germination protein BEST7613_0372 PF05504 Spore germination B3/ GerAC like, C-terminal BEST7613_0373 PF03845 Spore germination protein BEST7613_0374 PF00005 ABC transporter BEST7613_0375 PF02687 FtsX-like permease family BEST7613_0375 PF12704 MacB-like periplasmic core domain BEST7613_0376 PF00486 Transcriptional regulatory protein, C terminal BEST7613_0376 PF00072 Response regulator receiver domain BEST7613_0377 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_0377 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0377 PF00672 HAMP domain BEST7613_0378 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_0379 PF11131 Rap-phr extracellular signalling BEST7613_0380 PF00696 Amino acid kinase family BEST7613_0380 PF13840 ACT domain BEST7613_0381 PF01032 FecCD transport family BEST7613_0382 PF01032 FecCD transport family BEST7613_0383 PF00005 ABC transporter BEST7613_0384 PF01497 Periplasmic binding protein BEST7613_0385 PF07690 Major Facilitator Superfamily BEST7613_0386 PF00440 Bacterial regulatory proteins, tetR family BEST7613_0387 PF00881 Nitroreductase family BEST7613_0388 PF03992 Antibiotic biosynthesis monooxygenase BEST7613_0389 PF01022 Bacterial regulatory protein, arsR family BEST7613_0390 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0390 PF00155 Aminotransferase class I and II BEST7613_0391 PF00202 Aminotransferase class-III BEST7613_0392 PF00171 Aldehyde dehydrogenase family BEST7613_0393 PF06800 Sugar transport protein BEST7613_0395 PF07987 Domain of unkown function (DUF1775) BEST7613_0396 PF05425 Copper resistance protein D BEST7613_0396 PF04234 CopC domain BEST7613_0396 PF13115 YtkA-like BEST7613_0397 PF05573 NosL BEST7613_0397 PF08220 DeoR-like helix-turn-helix domain BEST7613_0399 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BEST7613_0399 PF02378 Phosphotransferase system, EIIC BEST7613_0400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEST7613_0401 PF01232 Mannitol dehydrogenase Rossmann domain BEST7613_0401 PF08125 Mannitol dehydrogenase C-terminal domain BEST7613_0402 PF00180 Isocitrate/isopropylmalate dehydrogenase BEST7613_0404 PF10502 Signal peptidase, peptidase S26 BEST7613_0405 PF01738 Dienelactone hydrolase family BEST7613_0406 PF07977 FabA-like domain BEST7613_0409 PF03746 LamB/YcsF family BEST7613_0410 PF01566 Natural resistance-associated macrophage protein BEST7613_0411 PF07286 Protein of unknown function (DUF1445) BEST7613_0412 PF02682 Carboxyltransferase domain, subdomain C and D BEST7613_0413 PF02626 Carboxyltransferase domain, subdomain A and B BEST7613_0414 PF01614 Bacterial transcriptional regulator BEST7613_0414 PF09339 IclR helix-turn-helix domain BEST7613_0415 PF13472 GDSL-like Lipase/Acylhydrolase family BEST7613_0416 PF13129 Protein of unknown function (DUF3953) BEST7613_0417 PF03992 Antibiotic biosynthesis monooxygenase BEST7613_0418 PF05223 NTF2-like N-terminal transpeptidase domain BEST7613_0418 PF03717 Penicillin-binding Protein dimerisation domain BEST7613_0418 PF00905 Penicillin binding protein transpeptidase domain BEST7613_0419 PF00248 Aldo/keto reductase family BEST7613_0420 PF05043 Mga helix-turn-helix domain BEST7613_0420 PF08279 HTH domain BEST7613_0420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BEST7613_0420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEST7613_0420 PF00874 PRD domain BEST7613_0421 PF13193 AMP-binding enzyme C-terminal domain BEST7613_0421 PF00501 AMP-binding enzyme BEST7613_0422 PF13649 Methyltransferase domain BEST7613_0425 PF13302 Acetyltransferase (GNAT) domain BEST7613_0426 PF16242 Pyridoxamine 5'-phosphate oxidase like BEST7613_0427 PF10997 Alternate to MurJ BEST7613_0428 PF12823 Domain of unknown function (DUF3817) BEST7613_0429 PF01037 Lrp/AsnC ligand binding domain BEST7613_0430 PF01131 DNA topoisomerase BEST7613_0430 PF01751 Toprim domain BEST7613_0432 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_0433 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BEST7613_0435 PF03170 Bacterial cellulose synthase subunit BEST7613_0436 PF13520 Amino acid permease BEST7613_0437 PF00293 NUDIX domain BEST7613_0438 PF00205 Thiamine pyrophosphate enzyme, central domain BEST7613_0438 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_0438 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_0441 PF01566 Natural resistance-associated macrophage protein BEST7613_0442 PF04226 Transglycosylase associated protein BEST7613_0443 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) BEST7613_0444 PF12787 EcsC protein family BEST7613_0445 PF10685 Stress-induced bacterial acidophilic repeat motif BEST7613_0445 PF00477 Small hydrophilic plant seed protein BEST7613_0446 PF07883 Cupin domain BEST7613_0447 PF16291 Domain of unknown function (DUF4937 BEST7613_0448 PF05067 Manganese containing catalase BEST7613_0449 PF03480 Bacterial extracellular solute-binding protein, family 7 BEST7613_0450 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BEST7613_0450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0450 PF17203 Single cache domain 3 BEST7613_0451 PF08279 HTH domain BEST7613_0451 PF00072 Response regulator receiver domain BEST7613_0452 PF00375 Sodium:dicarboxylate symporter family BEST7613_0453 PF01594 AI-2E family transporter BEST7613_0454 PF00005 ABC transporter BEST7613_0457 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEST7613_0457 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEST7613_0457 PF02770 Acyl-CoA dehydrogenase, middle domain BEST7613_0458 PF13040 Fur-regulated basic protein B BEST7613_0460 PF01545 Cation efflux family BEST7613_0460 PF16916 Dimerisation domain of Zinc Transporter BEST7613_0461 PF00085 Thioredoxin BEST7613_0462 PF07478 D-ala D-ala ligase C-terminus BEST7613_0462 PF01820 D-ala D-ala ligase N-terminus BEST7613_0463 PF08245 Mur ligase middle domain BEST7613_0463 PF02875 Mur ligase family, glutamate ligase domain BEST7613_0463 PF01225 Mur ligase family, catalytic domain BEST7613_0464 PF00270 DEAD/DEAH box helicase BEST7613_0464 PF00271 Helicase conserved C-terminal domain BEST7613_0465 PF03703 Bacterial PH domain BEST7613_0466 PF03703 Bacterial PH domain BEST7613_0467 PF01694 Rhomboid family BEST7613_0468 PF01648 4'-phosphopantetheinyl transferase superfamily BEST7613_0470 PF01168 Alanine racemase, N-terminal domain BEST7613_0470 PF00842 Alanine racemase, C-terminal domain BEST7613_0471 PF01402 Ribbon-helix-helix protein, copG family BEST7613_0472 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BEST7613_0473 PF08678 Rsbr N terminal BEST7613_0473 PF01740 STAS domain BEST7613_0474 PF01740 STAS domain BEST7613_0475 PF13581 Histidine kinase-like ATPase domain BEST7613_0476 PF07228 Stage II sporulation protein E (SpoIIE) BEST7613_0476 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BEST7613_0477 PF01740 STAS domain BEST7613_0478 PF13581 Histidine kinase-like ATPase domain BEST7613_0479 PF04539 Sigma-70 region 3 BEST7613_0479 PF04542 Sigma-70 region 2 BEST7613_0479 PF04545 Sigma-70, region 4 BEST7613_0480 PF07228 Stage II sporulation protein E (SpoIIE) BEST7613_0483 PF01878 EVE domain BEST7613_0484 PF01047 MarR family BEST7613_0485 PF09371 Tex-like protein N-terminal domain BEST7613_0485 PF00575 S1 RNA binding domain BEST7613_0485 PF16921 Tex protein YqgF-like domain BEST7613_0485 PF17674 HHH domain BEST7613_0486 PF17283 SprT-like zinc ribbon domain BEST7613_0486 PF10263 SprT-like family BEST7613_0487 PF00296 Luciferase-like monooxygenase BEST7613_0488 PF01037 Lrp/AsnC ligand binding domain BEST7613_0489 PF01037 Lrp/AsnC ligand binding domain BEST7613_0490 PF00857 Isochorismatase family BEST7613_0491 PF12706 Beta-lactamase superfamily domain BEST7613_0492 PF00083 Sugar (and other) transporter BEST7613_0492 PF07690 Major Facilitator Superfamily BEST7613_0496 PF01965 DJ-1/PfpI family BEST7613_0497 PF00313 'Cold-shock' DNA-binding domain BEST7613_0498 PF02559 CarD-like/TRCF domain BEST7613_0499 PF00892 EamA-like transporter family BEST7613_0500 PF12833 Helix-turn-helix domain BEST7613_0500 PF02311 AraC-like ligand binding domain BEST7613_0501 PF00892 EamA-like transporter family BEST7613_0502 PF06445 GyrI-like small molecule binding domain BEST7613_0502 PF12833 Helix-turn-helix domain BEST7613_0503 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0503 PF00155 Aminotransferase class I and II BEST7613_0504 PF07690 Major Facilitator Superfamily BEST7613_0506 PF08818 Domain of unknown function (DU1801) BEST7613_0508 PF00892 EamA-like transporter family BEST7613_0509 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0509 PF00155 Aminotransferase class I and II BEST7613_0510 PF01575 MaoC like domain BEST7613_0511 PF06821 Serine hydrolase BEST7613_0512 PF01638 HxlR-like helix-turn-helix BEST7613_0513 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BEST7613_0513 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BEST7613_0514 PF01638 HxlR-like helix-turn-helix BEST7613_0515 PF02525 Flavodoxin-like fold BEST7613_0516 PF07690 Major Facilitator Superfamily BEST7613_0517 PF16859 Tetracyclin repressor-like, C-terminal domain BEST7613_0517 PF00440 Bacterial regulatory proteins, tetR family BEST7613_0519 PF01022 Bacterial regulatory protein, arsR family BEST7613_0520 PF02040 Arsenical pump membrane protein BEST7613_0521 PF12746 GNAT acetyltransferase BEST7613_0522 PF00892 EamA-like transporter family BEST7613_0523 PF00155 Aminotransferase class I and II BEST7613_0523 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0524 PF01613 Flavin reductase like domain BEST7613_0526 PF02627 Carboxymuconolactone decarboxylase family BEST7613_0528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0528 PF07730 Histidine kinase BEST7613_0529 PF00072 Response regulator receiver domain BEST7613_0529 PF00196 Bacterial regulatory proteins, luxR family BEST7613_0530 PF03176 MMPL family BEST7613_0531 PF12697 Alpha/beta hydrolase family BEST7613_0532 PF04474 Protein of unknown function (DUF554) BEST7613_0533 PF13411 MerR HTH family regulatory protein BEST7613_0533 PF06445 GyrI-like small molecule binding domain BEST7613_0534 PF01545 Cation efflux family BEST7613_0534 PF16916 Dimerisation domain of Zinc Transporter BEST7613_0535 PF00881 Nitroreductase family BEST7613_0536 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_0537 PF07681 DoxX BEST7613_0538 PF00085 Thioredoxin BEST7613_0539 PF10676 Spore germination protein gerPA/gerPF BEST7613_0540 PF10676 Spore germination protein gerPA/gerPF BEST7613_0541 PF04239 Protein of unknown function (DUF421) BEST7613_0542 PF04239 Protein of unknown function (DUF421) BEST7613_0543 PF00011 Hsp20/alpha crystallin family BEST7613_0544 PF10676 Spore germination protein gerPA/gerPF BEST7613_0545 PF10676 Spore germination protein gerPA/gerPF BEST7613_0546 PF00440 Bacterial regulatory proteins, tetR family BEST7613_0547 PF13564 DoxX-like family BEST7613_0548 PF00583 Acetyltransferase (GNAT) family BEST7613_0550 PF00324 Amino acid permease BEST7613_0551 PF05163 DinB family BEST7613_0552 PF01047 MarR family BEST7613_0553 PF03176 MMPL family BEST7613_0554 PF00881 Nitroreductase family BEST7613_0555 PF01047 MarR family BEST7613_0556 PF07690 Major Facilitator Superfamily BEST7613_0557 PF01925 Sulfite exporter TauE/SafE BEST7613_0558 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0558 PF07729 FCD domain BEST7613_0559 PF01476 LysM domain BEST7613_0559 PF00704 Glycosyl hydrolases family 18 BEST7613_0560 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BEST7613_0561 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BEST7613_0561 PF11611 Domain of unknown function (DUF4352) BEST7613_0562 PF00245 Alkaline phosphatase BEST7613_0563 PF08818 Domain of unknown function (DU1801) BEST7613_0564 PF16302 Domain of unknown function (DUF4944) BEST7613_0565 PF00583 Acetyltransferase (GNAT) family BEST7613_0566 PF01966 HD domain BEST7613_0567 PF07563 Protein of unknown function (DUF1541) BEST7613_0568 PF07690 Major Facilitator Superfamily BEST7613_0569 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BEST7613_0570 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BEST7613_0571 PF02378 Phosphotransferase system, EIIC BEST7613_0572 PF00232 Glycosyl hydrolase family 1 BEST7613_0573 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0573 PF07702 UTRA domain BEST7613_0574 PF00480 ROK family BEST7613_0575 PF01238 Phosphomannose isomerase type I BEST7613_0576 PF02156 Glycosyl hydrolase family 26 BEST7613_0580 PF02769 AIR synthase related protein, C-terminal domain BEST7613_0580 PF00586 AIR synthase related protein, N-terminal domain BEST7613_0581 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BEST7613_0582 PF00814 Glycoprotease family BEST7613_0583 PF00583 Acetyltransferase (GNAT) family BEST7613_0584 PF00814 Glycoprotease family BEST7613_0585 PF16326 ABC transporter C-terminal domain BEST7613_0585 PF12848 ABC transporter BEST7613_0585 PF00005 ABC transporter BEST7613_0586 PF01967 MoaC family BEST7613_0587 PF06971 Putative DNA-binding protein N-terminus BEST7613_0587 PF02629 CoA binding domain BEST7613_0588 PF02416 mttA/Hcf106 family BEST7613_0589 PF00902 Sec-independent protein translocase protein (TatC) BEST7613_0590 PF14146 Domain of unknown function (DUF4305) BEST7613_0591 PF02517 CPBP intramembrane metalloprotease BEST7613_0592 PF00166 Chaperonin 10 Kd subunit BEST7613_0593 PF00118 TCP-1/cpn60 chaperonin family BEST7613_0595 PF13176 Tetratricopeptide repeat BEST7613_0595 PF00931 NB-ARC domain BEST7613_0596 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_0596 PF00107 Zinc-binding dehydrogenase BEST7613_0598 PF00294 pfkB family carbohydrate kinase BEST7613_0599 PF14154 Domain of unknown function (DUF4306) BEST7613_0600 PF04012 PspA/IM30 family BEST7613_0601 PF08271 TFIIB zinc-binding BEST7613_0602 PF04536 TPM domain BEST7613_0603 PF13421 SPFH domain-Band 7 family BEST7613_0604 PF01757 Acyltransferase family BEST7613_0605 PF11738 Protein of unknown function (DUF3298) BEST7613_0605 PF13739 Deacetylase PdaC BEST7613_0606 PF08281 Sigma-70, region 4 BEST7613_0606 PF04542 Sigma-70 region 2 BEST7613_0607 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_0607 PF00107 Zinc-binding dehydrogenase BEST7613_0608 PF03330 Lytic transglycolase BEST7613_0609 PF07676 WD40-like Beta Propeller Repeat BEST7613_0611 PF14169 Cold-inducible protein YdjO BEST7613_0612 PF00394 Multicopper oxidase BEST7613_0612 PF07731 Multicopper oxidase BEST7613_0612 PF07732 Multicopper oxidase BEST7613_0613 PF00324 Amino acid permease BEST7613_0614 PF01545 Cation efflux family BEST7613_0614 PF16916 Dimerisation domain of Zinc Transporter BEST7613_0615 PF07726 ATPase family associated with various cellular activities (AAA) BEST7613_0615 PF17863 AAA lid domain BEST7613_0616 PF01882 Protein of unknown function DUF58 BEST7613_0617 PF13559 Domain of unknown function (DUF4129) BEST7613_0617 PF11992 Domain of unknown function (DUF3488) BEST7613_0617 PF01841 Transglutaminase-like superfamily BEST7613_0618 PF02540 NAD synthase BEST7613_0618 PF00958 GMP synthase C terminal domain BEST7613_0618 PF00117 Glutamine amidotransferase class-I BEST7613_0619 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_0619 PF02142 MGS-like domain BEST7613_0619 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEST7613_0620 PF02655 ATP-grasp domain BEST7613_0620 PF00206 Lyase BEST7613_0622 PF00155 Aminotransferase class I and II BEST7613_0623 PF07690 Major Facilitator Superfamily BEST7613_0624 PF04545 Sigma-70, region 4 BEST7613_0624 PF04542 Sigma-70 region 2 BEST7613_0626 PF00860 Permease family BEST7613_0628 PF13076 Fur-regulated basic protein A BEST7613_0629 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BEST7613_0630 PF14044 NETI protein BEST7613_0631 PF00731 AIR carboxylase BEST7613_0632 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BEST7613_0632 PF02222 ATP-grasp domain BEST7613_0633 PF10397 Adenylosuccinate lyase C-terminus BEST7613_0633 PF00206 Lyase BEST7613_0634 PF01259 SAICAR synthetase BEST7613_0635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BEST7613_0637 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BEST7613_0637 PF00586 AIR synthase related protein, N-terminal domain BEST7613_0637 PF02769 AIR synthase related protein, C-terminal domain BEST7613_0638 PF00156 Phosphoribosyl transferase domain BEST7613_0639 PF00586 AIR synthase related protein, N-terminal domain BEST7613_0639 PF02769 AIR synthase related protein, C-terminal domain BEST7613_0640 PF00551 Formyl transferase BEST7613_0641 PF01808 AICARFT/IMPCHase bienzyme BEST7613_0641 PF02142 MGS-like domain BEST7613_0642 PF02843 Phosphoribosylglycinamide synthetase, C domain BEST7613_0642 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BEST7613_0642 PF02844 Phosphoribosylglycinamide synthetase, N domain BEST7613_0643 PF01037 Lrp/AsnC ligand binding domain BEST7613_0644 PF13520 Amino acid permease BEST7613_0645 PF11127 Protein of unknown function (DUF2892) BEST7613_0646 PF01979 Amidohydrolase family BEST7613_0646 PF13382 Adenine deaminase C-terminal domain BEST7613_0647 PF11258 Protein of unknown function (DUF3048) N-terminal domain BEST7613_0647 PF17479 Protein of unknown function (DUF3048) C-terminal domain BEST7613_0648 PF01371 Trp repressor protein BEST7613_0649 PF01645 Conserved region in glutamate synthase BEST7613_0650 PF01884 PcrB family BEST7613_0651 PF00580 UvrD/REP helicase N-terminal domain BEST7613_0651 PF13361 UvrD-like helicase C-terminal domain BEST7613_0652 PF03120 NAD-dependent DNA ligase OB-fold domain BEST7613_0652 PF00533 BRCA1 C Terminus (BRCT) domain BEST7613_0652 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BEST7613_0652 PF01653 NAD-dependent DNA ligase adenylation domain BEST7613_0652 PF12826 Helix-hairpin-helix motif BEST7613_0653 PF07537 CamS sex pheromone cAM373 precursor BEST7613_0654 PF01636 Phosphotransferase enzyme family BEST7613_0655 PF02308 MgtC family BEST7613_0656 PF00474 Sodium:solute symporter family BEST7613_0657 PF02686 Glu-tRNAGln amidotransferase C subunit BEST7613_0658 PF01425 Amidase BEST7613_0659 PF02637 GatB domain BEST7613_0659 PF02934 GatB/GatE catalytic domain BEST7613_0660 PF00440 Bacterial regulatory proteins, tetR family BEST7613_0661 PF00873 AcrB/AcrD/AcrF family BEST7613_0662 PF00781 Diacylglycerol kinase catalytic domain BEST7613_0663 PF05958 tRNA (Uracil-5-)-methyltransferase BEST7613_0663 PF01938 TRAM domain BEST7613_0664 PF13408 Recombinase zinc beta ribbon domain BEST7613_0664 PF07508 Recombinase BEST7613_0665 PF18010 Cry35Ab1 HTH C-terminal domain BEST7613_0665 PF00239 Resolvase, N terminal domain BEST7613_0668 PF10544 T5orf172 domain BEST7613_0671 PF04634 Protein of unknown function, DUF600 BEST7613_0672 PF04740 LXG domain of WXG superfamily BEST7613_0674 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_0674 PF13176 Tetratricopeptide repeat BEST7613_0676 PF01709 Transcriptional regulator BEST7613_0678 PF00440 Bacterial regulatory proteins, tetR family BEST7613_0679 PF12680 SnoaL-like domain BEST7613_0680 PF01370 NAD dependent epimerase/dehydratase family BEST7613_0681 PF11007 Spore coat associated protein JA (CotJA) BEST7613_0682 PF12652 CotJB protein BEST7613_0683 PF05067 Manganese containing catalase BEST7613_0684 PF00583 Acetyltransferase (GNAT) family BEST7613_0685 PF14150 YesK-like protein BEST7613_0686 PF04854 Protein of unknown function, DUF624 BEST7613_0687 PF00672 HAMP domain BEST7613_0687 PF06580 Histidine kinase BEST7613_0687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0687 PF02743 Cache domain BEST7613_0688 PF00072 Response regulator receiver domain BEST7613_0688 PF12833 Helix-turn-helix domain BEST7613_0689 PF13416 Bacterial extracellular solute-binding protein BEST7613_0690 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0691 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0692 PF07470 Glycosyl Hydrolase Family 88 BEST7613_0693 PF12833 Helix-turn-helix domain BEST7613_0694 PF13472 GDSL-like Lipase/Acylhydrolase family BEST7613_0695 PF09224 Domain of unknown function (DUF1961) BEST7613_0696 PF04854 Protein of unknown function, DUF624 BEST7613_0697 PF18370 Rhamnogalacturonan I lyases beta-sheet domain BEST7613_0698 PF18370 Rhamnogalacturonan I lyases beta-sheet domain BEST7613_0698 PF01839 FG-GAP repeat BEST7613_0699 PF00657 GDSL-like Lipase/Acylhydrolase BEST7613_0700 PF08533 Beta-galactosidase C-terminal domain BEST7613_0700 PF02449 Beta-galactosidase BEST7613_0700 PF08532 Beta-galactosidase trimerisation domain BEST7613_0702 PF01547 Bacterial extracellular solute-binding protein BEST7613_0703 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0704 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0705 PF02056 Family 4 glycosyl hydrolase BEST7613_0705 PF11975 Family 4 glycosyl hydrolase C-terminal domain BEST7613_0706 PF04239 Protein of unknown function (DUF421) BEST7613_0707 PF03992 Antibiotic biosynthesis monooxygenase BEST7613_0708 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_0710 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BEST7613_0710 PF01740 STAS domain BEST7613_0711 PF01740 STAS domain BEST7613_0712 PF10055 Uncharacterized small protein (DUF2292) BEST7613_0713 PF01027 Inhibitor of apoptosis-promoting Bax1 BEST7613_0714 PF00892 EamA-like transporter family BEST7613_0715 PF01047 MarR family BEST7613_0716 PF01494 FAD binding domain BEST7613_0717 PF13039 Protein of unknown function (DUF3900) BEST7613_0717 PF13037 Domain of unknown function (DUF3898) BEST7613_0718 PF00067 Cytochrome P450 BEST7613_0718 PF00175 Oxidoreductase NAD-binding domain BEST7613_0718 PF00258 Flavodoxin BEST7613_0718 PF00667 FAD binding domain BEST7613_0719 PF00884 Sulfatase BEST7613_0720 PF00483 Nucleotidyl transferase BEST7613_0721 PF16363 GDP-mannose 4,6 dehydratase BEST7613_0722 PF03407 Nucleotide-diphospho-sugar transferase BEST7613_0723 PF00535 Glycosyl transferase family 2 BEST7613_0724 PF03407 Nucleotide-diphospho-sugar transferase BEST7613_0725 PF07690 Major Facilitator Superfamily BEST7613_0726 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_0727 PF13520 Amino acid permease BEST7613_0728 PF00171 Aldehyde dehydrogenase family BEST7613_0729 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_0730 PF00005 ABC transporter BEST7613_0730 PF16326 ABC transporter C-terminal domain BEST7613_0730 PF12848 ABC transporter BEST7613_0731 PF10787 Uncharacterised protein from bacillus cereus group BEST7613_0732 PF13411 MerR HTH family regulatory protein BEST7613_0733 PF07690 Major Facilitator Superfamily BEST7613_0735 PF00005 ABC transporter BEST7613_0735 PF12848 ABC transporter BEST7613_0736 PF00270 DEAD/DEAH box helicase BEST7613_0736 PF00271 Helicase conserved C-terminal domain BEST7613_0737 PF00583 Acetyltransferase (GNAT) family BEST7613_0738 PF00107 Zinc-binding dehydrogenase BEST7613_0738 PF16884 N-terminal domain of oxidoreductase BEST7613_0740 PF07690 Major Facilitator Superfamily BEST7613_0741 PF03781 Sulfatase-modifying factor enzyme 1 BEST7613_0742 PF00005 ABC transporter BEST7613_0743 PF01032 FecCD transport family BEST7613_0744 PF01032 FecCD transport family BEST7613_0745 PF01497 Periplasmic binding protein BEST7613_0746 PF11486 Protein of unknown function (DUF3212) BEST7613_0747 PF11181 Heat induced stress protein YflT BEST7613_0748 PF00544 Pectate lyase BEST7613_0749 PF00939 Sodium:sulfate symporter transmembrane region BEST7613_0750 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BEST7613_0750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_0751 PF12431 Transcriptional regulator BEST7613_0751 PF00072 Response regulator receiver domain BEST7613_0751 PF08279 HTH domain BEST7613_0752 PF03401 Tripartite tricarboxylate transporter family receptor BEST7613_0753 PF03600 Citrate transporter BEST7613_0754 PF00753 Metallo-beta-lactamase superfamily BEST7613_0755 PF02898 Nitric oxide synthase, oxygenase domain BEST7613_0756 PF00708 Acylphosphatase BEST7613_0757 PF03475 3-alpha domain BEST7613_0757 PF03473 MOSC domain BEST7613_0758 PF11121 Protein of unknown function (DUF2639) BEST7613_0760 PF11588 Protein of unknown function (DUF3243) BEST7613_0761 PF00557 Metallopeptidase family M24 BEST7613_0762 PF00367 phosphotransferase system, EIIB BEST7613_0762 PF02378 Phosphotransferase system, EIIC BEST7613_0763 PF00884 Sulfatase BEST7613_0764 PF09350 Domain of unknown function (DUF1992) BEST7613_0765 PF01235 Sodium:alanine symporter family BEST7613_0766 PF03845 Spore germination protein BEST7613_0768 PF05504 Spore germination B3/ GerAC like, C-terminal BEST7613_0769 PF03323 Bacillus/Clostridium GerA spore germination protein BEST7613_0770 PF00367 phosphotransferase system, EIIB BEST7613_0770 PF02378 Phosphotransferase system, EIIC BEST7613_0771 PF00128 Alpha amylase, catalytic domain BEST7613_0771 PF16657 Maltogenic Amylase, C-terminal domain BEST7613_0772 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0772 PF07702 UTRA domain BEST7613_0773 PF00881 Nitroreductase family BEST7613_0774 PF00149 Calcineurin-like phosphoesterase BEST7613_0774 PF02872 5'-nucleotidase, C-terminal domain BEST7613_0775 PF01965 DJ-1/PfpI family BEST7613_0776 PF07690 Major Facilitator Superfamily BEST7613_0777 PF06569 Protein of unknown function (DUF1128) BEST7613_0778 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEST7613_0780 PF03631 Virulence factor BrkB BEST7613_0781 PF07690 Major Facilitator Superfamily BEST7613_0782 PF01699 Sodium/calcium exchanger protein BEST7613_0783 PF14167 YfkD-like protein BEST7613_0784 PF00924 Mechanosensitive ion channel BEST7613_0785 PF08756 YfkB-like domain BEST7613_0785 PF04055 Radical SAM superfamily BEST7613_0787 PF01522 Polysaccharide deacetylase BEST7613_0788 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEST7613_0788 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEST7613_0789 PF01544 CorA-like Mg2+ transporter protein BEST7613_0790 PF00730 HhH-GPD superfamily base excision DNA repair protein BEST7613_0791 PF01938 TRAM domain BEST7613_0791 PF05958 tRNA (Uracil-5-)-methyltransferase BEST7613_0792 PF14118 YfzA-like protein BEST7613_0793 PF01207 Dihydrouridine synthase (Dus) BEST7613_0796 PF00676 Dehydrogenase E1 component BEST7613_0797 PF02779 Transketolase, pyrimidine binding domain BEST7613_0797 PF02780 Transketolase, C-terminal domain BEST7613_0798 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEST7613_0798 PF00364 Biotin-requiring enzyme BEST7613_0798 PF02817 e3 binding domain BEST7613_0799 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEST7613_0799 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_0800 PF00158 Sigma-54 interaction domain BEST7613_0800 PF02954 Bacterial regulatory protein, Fis family BEST7613_0800 PF01590 GAF domain BEST7613_0801 PF08141 Small acid-soluble spore protein H family BEST7613_0802 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BEST7613_0803 PF17353 Family of unknown function (DUF5381) BEST7613_0804 PF17353 Family of unknown function (DUF5381) BEST7613_0807 PF06013 Proteins of 100 residues with WXG BEST7613_0808 PF11975 Family 4 glycosyl hydrolase C-terminal domain BEST7613_0808 PF02056 Family 4 glycosyl hydrolase BEST7613_0809 PF01380 SIS domain BEST7613_0809 PF01418 Helix-turn-helix domain, rpiR family BEST7613_0810 PF02378 Phosphotransferase system, EIIC BEST7613_0810 PF00367 phosphotransferase system, EIIB BEST7613_0811 PF00005 ABC transporter BEST7613_0811 PF00664 ABC transporter transmembrane region BEST7613_0812 PF00664 ABC transporter transmembrane region BEST7613_0812 PF00005 ABC transporter BEST7613_0813 PF07681 DoxX BEST7613_0814 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_0815 PF12833 Helix-turn-helix domain BEST7613_0815 PF02311 AraC-like ligand binding domain BEST7613_0816 PF00083 Sugar (and other) transporter BEST7613_0817 PF01261 Xylose isomerase-like TIM barrel BEST7613_0818 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_0818 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_0819 PF07730 Histidine kinase BEST7613_0820 PF00196 Bacterial regulatory proteins, luxR family BEST7613_0820 PF00072 Response regulator receiver domain BEST7613_0821 PF00005 ABC transporter BEST7613_0824 PF10400 Virulence activator alpha C-term BEST7613_0824 PF03551 Transcriptional regulator PadR-like family BEST7613_0825 PF01674 Lipase (class 2) BEST7613_0826 PF01757 Acyltransferase family BEST7613_0827 PF00440 Bacterial regulatory proteins, tetR family BEST7613_0827 PF17922 Tetracyclin repressor-like, C-terminal domain BEST7613_0828 PF07690 Major Facilitator Superfamily BEST7613_0829 PF12867 DinB superfamily BEST7613_0830 PF07690 Major Facilitator Superfamily BEST7613_0831 PF01047 MarR family BEST7613_0832 PF03706 Lysylphosphatidylglycerol synthase TM region BEST7613_0832 PF09924 Uncharacterised conserved protein (DUF2156) BEST7613_0833 PF01497 Periplasmic binding protein BEST7613_0835 PF01032 FecCD transport family BEST7613_0836 PF01032 FecCD transport family BEST7613_0837 PF02567 Phenazine biosynthesis-like protein BEST7613_0838 PF00881 Nitroreductase family BEST7613_0839 PF14151 YfhD-like protein BEST7613_0840 PF01370 NAD dependent epimerase/dehydratase family BEST7613_0840 PF08338 Domain of unknown function (DUF1731) BEST7613_0841 PF02631 RecX family BEST7613_0842 PF08838 Protein of unknown function (DUF1811) BEST7613_0843 PF07690 Major Facilitator Superfamily BEST7613_0844 PF08176 Small acid-soluble spore protein K family BEST7613_0845 PF14043 WVELL protein BEST7613_0846 PF08239 Bacterial SH3 domain BEST7613_0847 PF13630 SdpI/YhfL protein family BEST7613_0848 PF00561 alpha/beta hydrolase fold BEST7613_0849 PF00535 Glycosyl transferase family 2 BEST7613_0850 PF09586 Bacterial membrane protein YfhO BEST7613_0851 PF04307 LexA-binding, inner membrane-associated putative hydrolase BEST7613_0852 PF00730 HhH-GPD superfamily base excision DNA repair protein BEST7613_0852 PF14815 NUDIX domain BEST7613_0855 PF04259 Small, acid-soluble spore protein, gamma-type BEST7613_0856 PF14182 YgaB-like protein BEST7613_0857 PF04167 Protein of unknown function (DUF402) BEST7613_0858 PF00664 ABC transporter transmembrane region BEST7613_0858 PF00005 ABC transporter BEST7613_0859 PF06081 Aromatic acid exporter family member 1 BEST7613_0860 PF00202 Aminotransferase class-III BEST7613_0861 PF00578 AhpC/TSA family BEST7613_0862 PF01475 Ferric uptake regulator family BEST7613_0863 PF11023 Zinc-ribbon containing domain BEST7613_0864 PF14540 Nucleotidyltransferase-like BEST7613_0864 PF18576 Helix-turn-helix domain BEST7613_0865 PF07070 SpoOM protein BEST7613_0867 PF07875 Coat F domain BEST7613_0868 PF03575 Peptidase family S51 BEST7613_0869 PF01964 Radical SAM ThiC family BEST7613_0869 PF13667 ThiC-associated domain BEST7613_0870 PF01565 FAD binding domain BEST7613_0870 PF08031 Berberine and berberine like BEST7613_0871 PF13040 Fur-regulated basic protein B BEST7613_0872 PF00199 Catalase BEST7613_0872 PF06628 Catalase-related immune-responsive BEST7613_0873 PF00005 ABC transporter BEST7613_0874 PF09084 NMT1/THI5 like BEST7613_0875 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_0876 PF00296 Luciferase-like monooxygenase BEST7613_0878 PF00253 Ribosomal protein S14p/S29e BEST7613_0880 PF01381 Helix-turn-helix BEST7613_0882 PF08331 Domain of unknown function (DUF1730) BEST7613_0883 PF12671 Putative amidase domain BEST7613_0884 PF00588 SpoU rRNA Methylase family BEST7613_0885 PF13171 Protein of unknown function (DUF4004) BEST7613_0886 PF04519 Polymer-forming cytoskeletal BEST7613_0888 PF06798 PrkA serine protein kinase C-terminal domain BEST7613_0888 PF08298 PrkA AAA domain BEST7613_0889 PF04285 Protein of unknown function (DUF444) BEST7613_0890 PF01047 MarR family BEST7613_0892 PF07690 Major Facilitator Superfamily BEST7613_0893 PF03358 NADPH-dependent FMN reductase BEST7613_0896 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0897 PF00005 ABC transporter BEST7613_0898 PF00005 ABC transporter BEST7613_0899 PF12679 ABC-2 family transporter protein BEST7613_0900 PF00313 'Cold-shock' DNA-binding domain BEST7613_0901 PF03180 NLPA lipoprotein BEST7613_0902 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_0902 PF07694 5TMR of 5TMR-LYT BEST7613_0903 PF00375 Sodium:dicarboxylate symporter family BEST7613_0905 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BEST7613_0907 PF07875 Coat F domain BEST7613_0908 PF00746 LPXTG cell wall anchor motif BEST7613_0908 PF02872 5'-nucleotidase, C-terminal domain BEST7613_0908 PF00149 Calcineurin-like phosphoesterase BEST7613_0908 PF00565 Staphylococcal nuclease homologue BEST7613_0909 PF04203 Sortase domain BEST7613_0910 PF00849 RNA pseudouridylate synthase BEST7613_0910 PF01479 S4 domain BEST7613_0911 PF17326 Family of unknown function (DUF5365) BEST7613_0912 PF00571 CBS domain BEST7613_0913 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_0914 PF00583 Acetyltransferase (GNAT) family BEST7613_0914 PF00795 Carbon-nitrogen hydrolase BEST7613_0916 PF00202 Aminotransferase class-III BEST7613_0917 PF04309 Glycerol-3-phosphate responsive antiterminator BEST7613_0918 PF00230 Major intrinsic protein BEST7613_0919 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_0919 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEST7613_0920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BEST7613_0920 PF01266 FAD dependent oxidoreductase BEST7613_0921 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEST7613_0921 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEST7613_0921 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEST7613_0921 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEST7613_0922 PF13185 GAF domain BEST7613_0922 PF07730 Histidine kinase BEST7613_0923 PF00072 Response regulator receiver domain BEST7613_0923 PF00196 Bacterial regulatory proteins, luxR family BEST7613_0924 PF03358 NADPH-dependent FMN reductase BEST7613_0925 PF14148 YhdB-like protein BEST7613_0926 PF13028 Protein of unknown function (DUF3889) BEST7613_0927 PF01476 LysM domain BEST7613_0927 PF00877 NlpC/P60 family BEST7613_0928 PF02082 Transcriptional regulator BEST7613_0929 PF05552 Conserved TM helix BEST7613_0930 PF04293 SpoVR like protein BEST7613_0931 PF00245 Alkaline phosphatase BEST7613_0932 PF01476 LysM domain BEST7613_0932 PF00877 NlpC/P60 family BEST7613_0933 PF03466 LysR substrate binding domain BEST7613_0933 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_0934 PF00285 Citrate synthase, C-terminal domain BEST7613_0936 PF13520 Amino acid permease BEST7613_0937 PF00209 Sodium:neurotransmitter symporter family BEST7613_0938 PF00392 Bacterial regulatory proteins, gntR family BEST7613_0938 PF00155 Aminotransferase class I and II BEST7613_0939 PF00583 Acetyltransferase (GNAT) family BEST7613_0940 PF17453 Sigma-M inhibitor BEST7613_0941 PF13800 Sigma factor regulator N-terminal BEST7613_0941 PF13791 Sigma factor regulator C-terminal BEST7613_0942 PF08281 Sigma-70, region 4 BEST7613_0942 PF04542 Sigma-70 region 2 BEST7613_0943 PF00248 Aldo/keto reductase family BEST7613_0944 PF01553 Acyltransferase BEST7613_0945 PF00571 CBS domain BEST7613_0945 PF03471 Transporter associated domain BEST7613_0945 PF01595 Cyclin M transmembrane N-terminal domain BEST7613_0946 PF13411 MerR HTH family regulatory protein BEST7613_0947 PF00155 Aminotransferase class I and II BEST7613_0948 PF00571 CBS domain BEST7613_0948 PF03471 Transporter associated domain BEST7613_0948 PF01595 Cyclin M transmembrane N-terminal domain BEST7613_0949 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BEST7613_0950 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BEST7613_0951 PF03009 Glycerophosphoryl diester phosphodiesterase family BEST7613_0952 PF17444 Uncharacterized YhdX-like BEST7613_0953 PF00924 Mechanosensitive ion channel BEST7613_0954 PF02146 Sir2 family BEST7613_0955 PF01522 Polysaccharide deacetylase BEST7613_0956 PF01063 Amino-transferase class IV BEST7613_0957 PF03553 Na+/H+ antiporter family BEST7613_0958 PF00582 Universal stress protein family BEST7613_0959 PF00664 ABC transporter transmembrane region BEST7613_0959 PF00005 ABC transporter BEST7613_0960 PF00005 ABC transporter BEST7613_0960 PF00664 ABC transporter transmembrane region BEST7613_0961 PF13460 NAD(P)H-binding BEST7613_0962 PF00269 Small, acid-soluble spore proteins, alpha/beta type BEST7613_0963 PF17277 Family of unknown function (DUF5342) BEST7613_0964 PF14398 YheC/D like ATP-grasp BEST7613_0965 PF14398 YheC/D like ATP-grasp BEST7613_0966 PF04286 Protein of unknown function (DUF445) BEST7613_0967 PF06133 Control of competence regulator ComK, YlbF/YmcA BEST7613_0968 PF08713 DNA alkylation repair enzyme BEST7613_0970 PF04055 Radical SAM superfamily BEST7613_0971 PF00999 Sodium/hydrogen exchanger family BEST7613_0972 PF02080 TrkA-C domain BEST7613_0974 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_0975 PF14120 YhzD-like protein BEST7613_0976 PF00005 ABC transporter BEST7613_0976 PF13732 Domain of unknown function (DUF4162) BEST7613_0978 PF00149 Calcineurin-like phosphoesterase BEST7613_0979 PF13514 AAA domain BEST7613_0980 PF01966 HD domain BEST7613_0981 PF14147 Sporulation protein YhaL BEST7613_0983 PF11667 Putative zincin peptidase BEST7613_0984 PF08963 Protein of unknown function (DUF1878) BEST7613_0985 PF01047 MarR family BEST7613_0986 PF12732 YtxH-like protein BEST7613_0987 PF17099 Tryptophan transporter TrpP BEST7613_0988 PF00266 Aminotransferase class-V BEST7613_0989 PF01230 HIT domain BEST7613_0990 PF00005 ABC transporter BEST7613_0991 PF05975 Bacterial ABC transporter protein EcsB BEST7613_0992 PF12787 EcsC protein family BEST7613_0993 PF01546 Peptidase family M20/M25/M40 BEST7613_0993 PF07687 Peptidase dimerisation domain BEST7613_0995 PF03992 Antibiotic biosynthesis monooxygenase BEST7613_0996 PF00905 Penicillin binding protein transpeptidase domain BEST7613_0996 PF00912 Transglycosylase BEST7613_0997 PF01208 Uroporphyrinogen decarboxylase (URO-D) BEST7613_1000 PF00440 Bacterial regulatory proteins, tetR family BEST7613_1000 PF17932 Tetracyclin repressor-like, C-terminal domain BEST7613_1002 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEST7613_1002 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEST7613_1003 PF10086 YhfC intramembrane metalloprotease BEST7613_1005 PF05343 M42 glutamyl aminopeptidase BEST7613_1006 PF04266 ASCH domain BEST7613_1007 PF00375 Sodium:dicarboxylate symporter family BEST7613_1008 PF12706 Beta-lactamase superfamily domain BEST7613_1009 PF10437 Bacterial lipoate protein ligase C-terminus BEST7613_1009 PF03099 Biotin/lipoate A/B protein ligase family BEST7613_1010 PF13460 NAD(P)H-binding BEST7613_1011 PF13193 AMP-binding enzyme C-terminal domain BEST7613_1011 PF00501 AMP-binding enzyme BEST7613_1013 PF01435 Peptidase family M48 BEST7613_1013 PF16491 CAAX prenyl protease N-terminal, five membrane helices BEST7613_1014 PF05922 Peptidase inhibitor I9 BEST7613_1014 PF00082 Subtilase family BEST7613_1015 PF00583 Acetyltransferase (GNAT) family BEST7613_1016 PF00107 Zinc-binding dehydrogenase BEST7613_1016 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_1017 PF01497 Periplasmic binding protein BEST7613_1018 PF00300 Histidine phosphatase superfamily (branch 1) BEST7613_1019 PF02803 Thiolase, C-terminal domain BEST7613_1019 PF00108 Thiolase, N-terminal domain BEST7613_1020 PF00501 AMP-binding enzyme BEST7613_1020 PF13193 AMP-binding enzyme C-terminal domain BEST7613_1021 PF02632 BioY family BEST7613_1022 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_1023 PF00355 Rieske [2Fe-2S] domain BEST7613_1023 PF01266 FAD dependent oxidoreductase BEST7613_1025 PF08858 IDEAL domain BEST7613_1026 PF06338 ComK protein BEST7613_1028 PF05901 Excalibur calcium-binding domain BEST7613_1029 PF00474 Sodium:solute symporter family BEST7613_1030 PF11755 Protein of unknown function (DUF3311) BEST7613_1032 PF09335 SNARE associated Golgi protein BEST7613_1033 PF10502 Signal peptidase, peptidase S26 BEST7613_1034 PF01494 FAD binding domain BEST7613_1035 PF01047 MarR family BEST7613_1036 PF07690 Major Facilitator Superfamily BEST7613_1038 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_1038 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_1039 PF05116 Sucrose-6F-phosphate phosphohydrolase BEST7613_1040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEST7613_1041 PF00356 Bacterial regulatory proteins, lacI family BEST7613_1042 PF05145 Transition state regulatory protein AbrB BEST7613_1043 PF07690 Major Facilitator Superfamily BEST7613_1044 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEST7613_1044 PF12793 Sugar transport-related sRNA regulator N-term BEST7613_1046 PF02915 Rubrerythrin BEST7613_1047 PF13361 UvrD-like helicase C-terminal domain BEST7613_1047 PF12705 PD-(D/E)XK nuclease superfamily BEST7613_1048 PF13361 UvrD-like helicase C-terminal domain BEST7613_1048 PF00580 UvrD/REP helicase N-terminal domain BEST7613_1048 PF12705 PD-(D/E)XK nuclease superfamily BEST7613_1049 PF12320 Type 5 capsule protein repressor C-terminal domain BEST7613_1049 PF00149 Calcineurin-like phosphoesterase BEST7613_1050 PF13476 AAA domain BEST7613_1052 PF10676 Spore germination protein gerPA/gerPF BEST7613_1053 PF10970 Spore germination protein GerPE BEST7613_1055 PF10737 Spore germination protein GerPC BEST7613_1056 PF10803 Spore germination GerPB BEST7613_1057 PF10676 Spore germination protein gerPA/gerPF BEST7613_1058 PF09388 Spo0E like sporulation regulatory protein BEST7613_1059 PF08757 CotH kinase protein BEST7613_1060 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEST7613_1061 PF07457 Protein of unknown function (DUF1516) BEST7613_1062 PF00082 Subtilase family BEST7613_1062 PF17936 Bacterial Ig domain BEST7613_1063 PF10949 Protein of unknown function (DUF2777) BEST7613_1064 PF13537 Glutamine amidotransferase domain BEST7613_1064 PF00733 Asparagine synthase BEST7613_1065 PF05163 DinB family BEST7613_1067 PF01554 MatE BEST7613_1068 PF02311 AraC-like ligand binding domain BEST7613_1068 PF12833 Helix-turn-helix domain BEST7613_1069 PF00356 Bacterial regulatory proteins, lacI family BEST7613_1070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_1070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_1071 PF05163 DinB family BEST7613_1072 PF01810 LysE type translocator BEST7613_1073 PF00155 Aminotransferase class I and II BEST7613_1073 PF00392 Bacterial regulatory proteins, gntR family BEST7613_1074 PF13599 Pentapeptide repeats (9 copies) BEST7613_1075 PF00561 alpha/beta hydrolase fold BEST7613_1075 PF08386 TAP-like protein BEST7613_1077 PF01747 ATP-sulfurylase BEST7613_1077 PF14306 PUA-like domain BEST7613_1078 PF01507 Phosphoadenosine phosphosulfate reductase family BEST7613_1079 PF04029 2-phosphosulpholactate phosphatase BEST7613_1080 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) BEST7613_1081 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BEST7613_1082 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEST7613_1082 PF13378 Enolase C-terminal domain-like BEST7613_1083 PF07690 Major Facilitator Superfamily BEST7613_1084 PF13673 Acetyltransferase (GNAT) domain BEST7613_1084 PF18014 Acetyltransferase (GNAT) domain BEST7613_1085 PF13673 Acetyltransferase (GNAT) domain BEST7613_1086 PF02574 Homocysteine S-methyltransferase BEST7613_1086 PF02219 Methylenetetrahydrofolate reductase BEST7613_1087 PF04461 Protein of unknown function (DUF520) BEST7613_1088 PF13509 S1 domain BEST7613_1088 PF17783 CvfB-like winged helix domain BEST7613_1092 PF17418 Sporulation delaying protein SdpA BEST7613_1093 PF03551 Transcriptional regulator PadR-like family BEST7613_1095 PF12650 Domain of unknown function (DUF3784) BEST7613_1096 PF01447 Thermolysin metallopeptidase, catalytic domain BEST7613_1096 PF03413 Peptidase propeptide and YPEB domain BEST7613_1096 PF07504 Fungalysin/Thermolysin Propeptide Motif BEST7613_1096 PF02868 Thermolysin metallopeptidase, alpha-helical domain BEST7613_1097 PF02645 Uncharacterised protein, DegV family COG1307 BEST7613_1098 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BEST7613_1098 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BEST7613_1099 PF12690 Intracellular proteinase inhibitor BEST7613_1100 PF12758 Protein of unknown function (DUF3813) BEST7613_1102 PF00326 Prolyl oligopeptidase family BEST7613_1103 PF01883 Iron-sulfur cluster assembly protein BEST7613_1105 PF01565 FAD binding domain BEST7613_1106 PF07690 Major Facilitator Superfamily BEST7613_1107 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEST7613_1107 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEST7613_1108 PF01960 ArgJ family BEST7613_1109 PF00696 Amino acid kinase family BEST7613_1110 PF00202 Aminotransferase class-III BEST7613_1111 PF00117 Glutamine amidotransferase class-I BEST7613_1111 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEST7613_1112 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEST7613_1112 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_1113 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEST7613_1113 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEST7613_1114 PF14168 YjzC-like protein BEST7613_1115 PF11151 Protein of unknown function (DUF2929) BEST7613_1118 PF02608 ABC transporter substrate-binding protein PnrA-like BEST7613_1119 PF10815 ComZ BEST7613_1121 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEST7613_1121 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEST7613_1122 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_1122 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_1123 PF10026 Predicted Zn-dependent protease (DUF2268) BEST7613_1124 PF00005 ABC transporter BEST7613_1124 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEST7613_1125 PF00005 ABC transporter BEST7613_1125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEST7613_1126 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEST7613_1127 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEST7613_1128 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_1129 PF12911 N-terminal TM domain of oligopeptide transport permease C BEST7613_1129 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_1130 PF12227 Protein of unknown function (DUF3603) BEST7613_1131 PF00579 tRNA synthetases class I (W and Y) BEST7613_1132 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEST7613_1133 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_1134 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_1134 PF12911 N-terminal TM domain of oligopeptide transport permease C BEST7613_1135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEST7613_1135 PF00005 ABC transporter BEST7613_1136 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEST7613_1136 PF00005 ABC transporter BEST7613_1137 PF07690 Major Facilitator Superfamily BEST7613_1138 PF13508 Acetyltransferase (GNAT) domain BEST7613_1139 PF03960 ArsC family BEST7613_1140 PF03741 Integral membrane protein TerC family BEST7613_1141 PF05389 Negative regulator of genetic competence (MecA) BEST7613_1142 PF06054 Competence protein CoiA-like family BEST7613_1143 PF08439 Oligopeptidase F BEST7613_1143 PF01432 Peptidase family M3 BEST7613_1146 PF01152 Bacterial-like globin BEST7613_1147 PF01464 Transglycosylase SLT domain BEST7613_1148 PF01928 CYTH domain BEST7613_1150 PF04607 Region found in RelA / SpoT proteins BEST7613_1151 PF01513 ATP-NAD kinase BEST7613_1152 PF00849 RNA pseudouridylate synthase BEST7613_1153 PF00149 Calcineurin-like phosphoesterase BEST7613_1154 PF02254 TrkA-N domain BEST7613_1154 PF02080 TrkA-C domain BEST7613_1154 PF00999 Sodium/hydrogen exchanger family BEST7613_1155 PF03070 TENA/THI-4/PQQC family BEST7613_1156 PF02581 Thiamine monophosphate synthase BEST7613_1157 PF01266 FAD dependent oxidoreductase BEST7613_1158 PF02597 ThiS family BEST7613_1159 PF05690 Thiazole biosynthesis protein ThiG BEST7613_1160 PF00899 ThiF family BEST7613_1161 PF08543 Phosphomethylpyrimidine kinase BEST7613_1163 PF14153 Spore coat protein CotO BEST7613_1164 PF10612 Spore coat protein Z BEST7613_1165 PF10612 Spore coat protein Z BEST7613_1166 PF07552 Spore Coat Protein X and V domain BEST7613_1168 PF07552 Spore Coat Protein X and V domain BEST7613_1169 PF07098 Protein of unknown function (DUF1360) BEST7613_1172 PF14069 Stage VI sporulation protein F BEST7613_1173 PF13361 UvrD-like helicase C-terminal domain BEST7613_1173 PF00580 UvrD/REP helicase N-terminal domain BEST7613_1175 PF13673 Acetyltransferase (GNAT) domain BEST7613_1177 PF00756 Putative esterase BEST7613_1178 PF01053 Cys/Met metabolism PLP-dependent enzyme BEST7613_1179 PF01053 Cys/Met metabolism PLP-dependent enzyme BEST7613_1180 PF13302 Acetyltransferase (GNAT) domain BEST7613_1181 PF05684 Protein of unknown function (DUF819) BEST7613_1183 PF12671 Putative amidase domain BEST7613_1189 PF09639 YjcQ protein BEST7613_1190 PF10668 Phage terminase small subunit BEST7613_1191 PF03992 Antibiotic biosynthesis monooxygenase BEST7613_1193 PF02368 Bacterial Ig-like domain (group 2) BEST7613_1194 PF05043 Mga helix-turn-helix domain BEST7613_1194 PF08279 HTH domain BEST7613_1194 PF00874 PRD domain BEST7613_1194 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEST7613_1195 PF02378 Phosphotransferase system, EIIC BEST7613_1195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEST7613_1195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BEST7613_1196 PF01238 Phosphomannose isomerase type I BEST7613_1197 PF11208 Protein of unknown function (DUF2992) BEST7613_1198 PF13302 Acetyltransferase (GNAT) domain BEST7613_1200 PF04073 Aminoacyl-tRNA editing domain BEST7613_1201 PF13783 Domain of unknown function (DUF4177) BEST7613_1202 PF14154 Domain of unknown function (DUF4306) BEST7613_1204 PF01040 UbiA prenyltransferase family BEST7613_1206 PF11738 Protein of unknown function (DUF3298) BEST7613_1206 PF13739 Deacetylase PdaC BEST7613_1206 PF01522 Polysaccharide deacetylase BEST7613_1207 PF10901 Protein of unknown function (DUF2690) BEST7613_1208 PF14070 Putative motility protein BEST7613_1209 PF10026 Predicted Zn-dependent protease (DUF2268) BEST7613_1210 PF10990 Protein of unknown function (DUF2809) BEST7613_1211 PF14172 Domain of unknown function (DUF4309) BEST7613_1212 PF00384 Molybdopterin oxidoreductase BEST7613_1212 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEST7613_1212 PF01568 Molydopterin dinucleotide binding domain BEST7613_1212 PF12838 4Fe-4S dicluster domain BEST7613_1212 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEST7613_1213 PF07849 Protein of unknown function (DUF1641) BEST7613_1214 PF11611 Domain of unknown function (DUF4352) BEST7613_1215 PF00293 NUDIX domain BEST7613_1217 PF00067 Cytochrome P450 BEST7613_1218 PF04101 Glycosyltransferase family 28 C-terminal domain BEST7613_1220 PF02602 Uroporphyrinogen-III synthase HemD BEST7613_1221 PF03649 Uncharacterised protein family (UPF0014) BEST7613_1222 PF00005 ABC transporter BEST7613_1223 PF13536 Putative multidrug resistance efflux transporter BEST7613_1225 PF07849 Protein of unknown function (DUF1641) BEST7613_1226 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_1227 PF02614 Glucuronate isomerase BEST7613_1229 PF02615 Malate/L-lactate dehydrogenase BEST7613_1230 PF00107 Zinc-binding dehydrogenase BEST7613_1230 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_1231 PF03786 D-mannonate dehydratase (UxuA) BEST7613_1232 PF00106 short chain dehydrogenase BEST7613_1233 PF07690 Major Facilitator Superfamily BEST7613_1234 PF00356 Bacterial regulatory proteins, lacI family BEST7613_1235 PF08125 Mannitol dehydrogenase C-terminal domain BEST7613_1235 PF01232 Mannitol dehydrogenase Rossmann domain BEST7613_1236 PF08666 SAF domain BEST7613_1236 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BEST7613_1237 PF01925 Sulfite exporter TauE/SafE BEST7613_1238 PF05163 DinB family BEST7613_1239 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_1240 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_1242 PF03795 YCII-related domain BEST7613_1243 PF01510 N-acetylmuramoyl-L-alanine amidase BEST7613_1243 PF01476 LysM domain BEST7613_1243 PF01471 Putative peptidoglycan binding domain BEST7613_1244 PF08000 Bacterial PH domain BEST7613_1245 PF05908 Poly-gamma-glutamate hydrolase BEST7613_1246 PF05067 Manganese containing catalase BEST7613_1247 PF06114 IrrE N-terminal-like domain BEST7613_1248 PF01381 Helix-turn-helix BEST7613_1251 PF01695 IstB-like ATP binding protein BEST7613_1254 PF17356 Phage-like element PBSX protein XtrA BEST7613_1255 PF08281 Sigma-70, region 4 BEST7613_1256 PF10668 Phage terminase small subunit BEST7613_1256 PF03592 Terminase small subunit BEST7613_1257 PF17288 Terminase RNAseH like domain BEST7613_1257 PF04466 Phage terminase large subunit BEST7613_1258 PF04860 Phage portal protein BEST7613_1259 PF14550 Putative phage serine protease XkdF BEST7613_1260 PF05065 Phage capsid family BEST7613_1261 PF11436 Protein of unknown function (DUF3199) BEST7613_1262 PF12206 Domain of unknown function (DUF3599) BEST7613_1263 PF04883 Bacteriophage HK97-gp10, putative tail-component BEST7613_1266 PF17482 Phage tail sheath C-terminal domain BEST7613_1266 PF04984 Phage tail sheath protein subtilisin-like domain BEST7613_1266 PF17481 Phage tail sheath protein beta-sandwich domain BEST7613_1267 PF09393 Phage tail tube protein BEST7613_1268 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC BEST7613_1270 PF01464 Transglycosylase SLT domain BEST7613_1271 PF01476 LysM domain BEST7613_1273 PF10844 Protein of unknown function (DUF2577) BEST7613_1274 PF10934 Protein of unknown function (DUF2634) BEST7613_1275 PF04865 Baseplate J-like protein BEST7613_1276 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) BEST7613_1279 PF09636 XkdW protein BEST7613_1280 PF09693 Phage uncharacterised protein (Phage_XkdX) BEST7613_1282 PF10779 Haemolysin XhlA BEST7613_1283 PF04688 SPP1 phage holin BEST7613_1284 PF01510 N-acetylmuramoyl-L-alanine amidase BEST7613_1284 PF01471 Putative peptidoglycan binding domain BEST7613_1284 PF01476 LysM domain BEST7613_1285 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system BEST7613_1286 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BEST7613_1287 PF01384 Phosphate transporter family BEST7613_1288 PF01865 Protein of unknown function DUF47 BEST7613_1289 PF13520 Amino acid permease BEST7613_1290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_1292 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BEST7613_1293 PF00535 Glycosyl transferase family 2 BEST7613_1295 PF13180 PDZ domain BEST7613_1296 PF03807 NADP oxidoreductase coenzyme F420-dependent BEST7613_1296 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEST7613_1297 PF04951 D-aminopeptidase BEST7613_1298 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_1299 PF12911 N-terminal TM domain of oligopeptide transport permease C BEST7613_1299 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_1300 PF00005 ABC transporter BEST7613_1300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEST7613_1301 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEST7613_1302 PF17676 LD-carboxypeptidase C-terminal domain BEST7613_1302 PF02016 LD-carboxypeptidase N-terminal domain BEST7613_1303 PF13378 Enolase C-terminal domain-like BEST7613_1303 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEST7613_1304 PF00877 NlpC/P60 family BEST7613_1305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEST7613_1305 PF00005 ABC transporter BEST7613_1306 PF10282 Lactonase, 7-bladed beta-propeller BEST7613_1308 PF03061 Thioesterase superfamily BEST7613_1309 PF00175 Oxidoreductase NAD-binding domain BEST7613_1309 PF00970 Oxidoreductase FAD-binding domain BEST7613_1309 PF00042 Globin BEST7613_1311 PF04239 Protein of unknown function (DUF421) BEST7613_1312 PF12867 DinB superfamily BEST7613_1313 PF13302 Acetyltransferase (GNAT) domain BEST7613_1314 PF00893 Small Multidrug Resistance protein BEST7613_1315 PF00893 Small Multidrug Resistance protein BEST7613_1316 PF00551 Formyl transferase BEST7613_1316 PF01842 ACT domain BEST7613_1317 PF01472 PUA domain BEST7613_1317 PF00696 Amino acid kinase family BEST7613_1318 PF01815 Rop protein BEST7613_1321 PF07690 Major Facilitator Superfamily BEST7613_1322 PF07690 Major Facilitator Superfamily BEST7613_1324 PF12704 MacB-like periplasmic core domain BEST7613_1324 PF02687 FtsX-like permease family BEST7613_1324 PF00005 ABC transporter BEST7613_1325 PF01475 Ferric uptake regulator family BEST7613_1326 PF02633 Creatinine amidohydrolase BEST7613_1327 PF01808 AICARFT/IMPCHase bienzyme BEST7613_1327 PF02142 MGS-like domain BEST7613_1331 PF00069 Protein kinase domain BEST7613_1332 PF01494 FAD binding domain BEST7613_1336 PF14579 Helix-hairpin-helix motif BEST7613_1336 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEST7613_1336 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEST7613_1336 PF02811 PHP domain BEST7613_1336 PF01336 OB-fold nucleic acid binding domain BEST7613_1338 PF00679 Elongation factor G C-terminus BEST7613_1338 PF03144 Elongation factor Tu domain 2 BEST7613_1338 PF06421 GTP-binding protein LepA C-terminus BEST7613_1338 PF00009 Elongation factor Tu GTP binding domain BEST7613_1339 PF13409 Glutathione S-transferase, N-terminal domain BEST7613_1342 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BEST7613_1342 PF01502 Phosphoribosyl-AMP cyclohydrolase BEST7613_1343 PF07683 Cobalamin synthesis protein cobW C-terminal domain BEST7613_1343 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEST7613_1345 PF00348 Polyprenyl synthetase BEST7613_1346 PF00849 RNA pseudouridylate synthase BEST7613_1348 PF16416 ARM-like repeat domain, GUN4-N terminal BEST7613_1348 PF05419 GUN4-like BEST7613_1349 PF02915 Rubrerythrin BEST7613_1350 PF01370 NAD dependent epimerase/dehydratase family BEST7613_1351 PF16363 GDP-mannose 4,6 dehydratase BEST7613_1352 PF00124 Photosynthetic reaction centre protein BEST7613_1353 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEST7613_1353 PF17944 Arginine decarboxylase C-terminal helical extension BEST7613_1353 PF17810 Arginine decarboxylase helical bundle domain BEST7613_1354 PF00533 BRCA1 C Terminus (BRCT) domain BEST7613_1354 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BEST7613_1354 PF12826 Helix-hairpin-helix motif BEST7613_1354 PF01653 NAD-dependent DNA ligase adenylation domain BEST7613_1354 PF03120 NAD-dependent DNA ligase OB-fold domain BEST7613_1356 PF01032 FecCD transport family BEST7613_1357 PF01032 FecCD transport family BEST7613_1358 PF00005 ABC transporter BEST7613_1359 PF01497 Periplasmic binding protein BEST7613_1360 PF07715 TonB-dependent Receptor Plug Domain BEST7613_1360 PF00593 TonB dependent receptor BEST7613_1361 PF12833 Helix-turn-helix domain BEST7613_1361 PF02311 AraC-like ligand binding domain BEST7613_1365 PF00593 TonB dependent receptor BEST7613_1365 PF07715 TonB-dependent Receptor Plug Domain BEST7613_1366 PF17853 GGDEF-like domain BEST7613_1366 PF12833 Helix-turn-helix domain BEST7613_1367 PF13649 Methyltransferase domain BEST7613_1368 PF00593 TonB dependent receptor BEST7613_1368 PF07715 TonB-dependent Receptor Plug Domain BEST7613_1369 PF02472 Biopolymer transport protein ExbD/TolR BEST7613_1370 PF01618 MotA/TolQ/ExbB proton channel family BEST7613_1374 PF00664 ABC transporter transmembrane region BEST7613_1374 PF00005 ABC transporter BEST7613_1376 PF07715 TonB-dependent Receptor Plug Domain BEST7613_1376 PF00593 TonB dependent receptor BEST7613_1377 PF00593 TonB dependent receptor BEST7613_1377 PF07715 TonB-dependent Receptor Plug Domain BEST7613_1377 PF07660 Secretin and TonB N terminus short domain BEST7613_1378 PF01497 Periplasmic binding protein BEST7613_1379 PF01497 Periplasmic binding protein BEST7613_1381 PF00664 ABC transporter transmembrane region BEST7613_1381 PF00005 ABC transporter BEST7613_1386 PF03912 Psb28 protein BEST7613_1390 PF01924 Hydrogenase formation hypA family BEST7613_1391 PF04321 RmlD substrate binding domain BEST7613_1392 PF01625 Peptide methionine sulfoxide reductase BEST7613_1393 PF08323 Starch synthase catalytic domain BEST7613_1393 PF00534 Glycosyl transferases group 1 BEST7613_1396 PF13732 Domain of unknown function (DUF4162) BEST7613_1396 PF00005 ABC transporter BEST7613_1399 PF05163 DinB family BEST7613_1402 PF03808 Glycosyl transferase WecB/TagA/CpsF family BEST7613_1403 PF00814 Glycoprotease family BEST7613_1407 PF03699 Uncharacterised protein family (UPF0182) BEST7613_1410 PF06750 Bacterial Peptidase A24 N-terminal domain BEST7613_1410 PF01478 Type IV leader peptidase family BEST7613_1412 PF01113 Dihydrodipicolinate reductase, N-terminus BEST7613_1412 PF05173 Dihydrodipicolinate reductase, C-terminus BEST7613_1416 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BEST7613_1416 PF00586 AIR synthase related protein, N-terminal domain BEST7613_1416 PF02769 AIR synthase related protein, C-terminal domain BEST7613_1419 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEST7613_1420 PF00625 Guanylate kinase BEST7613_1421 PF00300 Histidine phosphatase superfamily (branch 1) BEST7613_1422 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BEST7613_1423 PF01925 Sulfite exporter TauE/SafE BEST7613_1424 PF03130 PBS lyase HEAT-like repeat BEST7613_1427 PF01145 SPFH domain / Band 7 family BEST7613_1428 PF10150 Ribonuclease E/G family BEST7613_1429 PF01351 Ribonuclease HII BEST7613_1430 PF00293 NUDIX domain BEST7613_1431 PF03725 3' exoribonuclease family, domain 2 BEST7613_1431 PF01138 3' exoribonuclease family, domain 1 BEST7613_1431 PF00575 S1 RNA binding domain BEST7613_1431 PF00013 KH domain BEST7613_1431 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BEST7613_1432 PF10502 Signal peptidase, peptidase S26 BEST7613_1433 PF00390 Malic enzyme, N-terminal domain BEST7613_1433 PF03949 Malic enzyme, NAD binding domain BEST7613_1434 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_1434 PF00571 CBS domain BEST7613_1435 PF08544 GHMP kinases C terminal BEST7613_1435 PF00288 GHMP kinases N terminal domain BEST7613_1437 PF07728 AAA domain (dynein-related subfamily) BEST7613_1438 PF00398 Ribosomal RNA adenine dimethylase BEST7613_1439 PF04452 RNA methyltransferase BEST7613_1442 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system BEST7613_1445 PF11378 Protein of unknown function (DUF3181) BEST7613_1448 PF00266 Aminotransferase class-V BEST7613_1453 PF02899 Phage integrase, N-terminal SAM-like domain BEST7613_1453 PF00589 Phage integrase family BEST7613_1455 PF01266 FAD dependent oxidoreductase BEST7613_1455 PF05690 Thiazole biosynthesis protein ThiG BEST7613_1458 PF00672 HAMP domain BEST7613_1458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_1458 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_1458 PF00989 PAS fold BEST7613_1459 PF02531 PsaD BEST7613_1460 PF00425 chorismate binding enzyme BEST7613_1460 PF04715 Anthranilate synthase component I, N terminal region BEST7613_1461 PF00348 Polyprenyl synthetase BEST7613_1464 PF01895 PhoU domain BEST7613_1465 PF17384 RimP C-terminal SH3 domain BEST7613_1465 PF02576 RimP N-terminal domain BEST7613_1466 PF00575 S1 RNA binding domain BEST7613_1466 PF08529 NusA N-terminal domain BEST7613_1466 PF13184 NusA-like KH domain BEST7613_1468 PF04760 Translation initiation factor IF-2, N-terminal region BEST7613_1468 PF11987 Translation-initiation factor 2 BEST7613_1468 PF00009 Elongation factor Tu GTP binding domain BEST7613_1470 PF00128 Alpha amylase, catalytic domain BEST7613_1470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEST7613_1473 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_1474 PF03965 Penicillinase repressor BEST7613_1476 PF00578 AhpC/TSA family BEST7613_1478 PF01910 Thiamine-binding protein BEST7613_1479 PF00582 Universal stress protein family BEST7613_1480 PF05151 Photosystem II reaction centre M protein (PsbM) BEST7613_1481 PF00850 Histone deacetylase domain BEST7613_1482 PF00491 Arginase family BEST7613_1483 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEST7613_1484 PF02392 Ycf4 BEST7613_1490 PF00005 ABC transporter BEST7613_1491 PF02571 Precorrin-6x reductase CbiJ/CobK BEST7613_1492 PF01241 Photosystem I psaG / psaK BEST7613_1494 PF00361 Proton-conducting membrane transporter BEST7613_1495 PF00149 Calcineurin-like phosphoesterase BEST7613_1497 PF03742 PetN BEST7613_1499 PF00578 AhpC/TSA family BEST7613_1500 PF01380 SIS domain BEST7613_1501 PF01613 Flavin reductase like domain BEST7613_1501 PF00258 Flavodoxin BEST7613_1503 PF01613 Flavin reductase like domain BEST7613_1503 PF00753 Metallo-beta-lactamase superfamily BEST7613_1505 PF03572 Peptidase family S41 BEST7613_1505 PF00595 PDZ domain BEST7613_1506 PF01300 Telomere recombination BEST7613_1507 PF01969 Protein of unknown function DUF111 BEST7613_1508 PF00231 ATP synthase BEST7613_1509 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEST7613_1509 PF00306 ATP synthase alpha/beta chain, C terminal domain BEST7613_1509 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEST7613_1510 PF00213 ATP synthase delta (OSCP) subunit BEST7613_1511 PF00430 ATP synthase B/B' CF(0) BEST7613_1513 PF00137 ATP synthase subunit C BEST7613_1514 PF00119 ATP synthase A chain BEST7613_1515 PF12966 N-ATPase, AtpR subunit BEST7613_1516 PF01926 50S ribosome-binding GTPase BEST7613_1516 PF12631 MnmE helical domain BEST7613_1516 PF10396 GTP-binding protein TrmE N-terminus BEST7613_1517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_1517 PF07689 KaiB domain BEST7613_1519 PF17863 AAA lid domain BEST7613_1519 PF07726 ATPase family associated with various cellular activities (AAA) BEST7613_1520 PF01521 Iron-sulphur cluster biosynthesis BEST7613_1521 PF00892 EamA-like transporter family BEST7613_1523 PF00005 ABC transporter BEST7613_1525 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BEST7613_1527 PF14403 Circularly permuted ATP-grasp type 2 BEST7613_1527 PF04168 A predicted alpha-helical domain with a conserved ER motif. BEST7613_1529 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEST7613_1529 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_1532 PF02441 Flavoprotein BEST7613_1534 PF00582 Universal stress protein family BEST7613_1535 PF00563 EAL domain BEST7613_1535 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1535 PF03707 Bacterial signalling protein N terminal repeat BEST7613_1536 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1536 PF00498 FHA domain BEST7613_1536 PF00563 EAL domain BEST7613_1537 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1537 PF03707 Bacterial signalling protein N terminal repeat BEST7613_1537 PF00563 EAL domain BEST7613_1541 PF12706 Beta-lactamase superfamily domain BEST7613_1548 PF00101 Ribulose bisphosphate carboxylase, small chain BEST7613_1549 PF03319 Ethanolamine utilisation protein EutN/carboxysome BEST7613_1550 PF00936 BMC domain BEST7613_1551 PF00936 BMC domain BEST7613_1552 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_1552 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEST7613_1560 PF01740 STAS domain BEST7613_1560 PF00916 Sulfate permease family BEST7613_1561 PF03040 CemA family BEST7613_1562 PF01078 Magnesium chelatase, subunit ChlI BEST7613_1562 PF13519 von Willebrand factor type A domain BEST7613_1562 PF17863 AAA lid domain BEST7613_1565 PF01276 Orn/Lys/Arg decarboxylase, major domain BEST7613_1565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BEST7613_1566 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEST7613_1566 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BEST7613_1567 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BEST7613_1568 PF10674 Protein of unknown function (DUF2488) BEST7613_1570 PF01641 SelR domain BEST7613_1571 PF13180 PDZ domain BEST7613_1572 PF00072 Response regulator receiver domain BEST7613_1573 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_1573 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_1574 PF07670 Nucleoside recognition BEST7613_1575 PF07670 Nucleoside recognition BEST7613_1576 PF02446 4-alpha-glucanotransferase BEST7613_1578 PF02769 AIR synthase related protein, C-terminal domain BEST7613_1578 PF00586 AIR synthase related protein, N-terminal domain BEST7613_1581 PF00360 Phytochrome region BEST7613_1581 PF00563 EAL domain BEST7613_1581 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1581 PF01590 GAF domain BEST7613_1582 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_1582 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_1582 PF00072 Response regulator receiver domain BEST7613_1582 PF09308 LuxQ, periplasmic BEST7613_1585 PF01507 Phosphoadenosine phosphosulfate reductase family BEST7613_1586 PF01628 HrcA protein C terminal domain BEST7613_1587 PF01202 Shikimate kinase BEST7613_1588 PF13202 EF hand BEST7613_1588 PF00923 Transaldolase/Fructose-6-phosphate aldolase BEST7613_1590 PF17886 HSP20-like domain found in ArsA BEST7613_1590 PF02374 Anion-transporting ATPase BEST7613_1591 PF01625 Peptide methionine sulfoxide reductase BEST7613_1594 PF00226 DnaJ domain BEST7613_1594 PF00684 DnaJ central domain BEST7613_1594 PF01556 DnaJ C terminal domain BEST7613_1597 PF00535 Glycosyl transferase family 2 BEST7613_1599 PF01817 Chorismate mutase type II BEST7613_1599 PF01842 ACT domain BEST7613_1599 PF00800 Prephenate dehydratase BEST7613_1600 PF00360 Phytochrome region BEST7613_1600 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1600 PF00563 EAL domain BEST7613_1600 PF01590 GAF domain BEST7613_1603 PF04055 Radical SAM superfamily BEST7613_1608 PF02237 Biotin protein ligase C terminal domain BEST7613_1608 PF08279 HTH domain BEST7613_1608 PF03099 Biotin/lipoate A/B protein ligase family BEST7613_1609 PF00582 Universal stress protein family BEST7613_1610 PF01209 ubiE/COQ5 methyltransferase family BEST7613_1612 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEST7613_1614 PF00180 Isocitrate/isopropylmalate dehydrogenase BEST7613_1615 PF05685 Putative restriction endonuclease BEST7613_1617 PF00361 Proton-conducting membrane transporter BEST7613_1619 PF01593 Flavin containing amine oxidoreductase BEST7613_1621 PF13416 Bacterial extracellular solute-binding protein BEST7613_1622 PF01746 tRNA (Guanine-1)-methyltransferase BEST7613_1624 PF00365 Phosphofructokinase BEST7613_1625 PF12805 FUSC-like inner membrane protein yccS BEST7613_1626 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) BEST7613_1629 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEST7613_1629 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEST7613_1629 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEST7613_1630 PF01494 FAD binding domain BEST7613_1631 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BEST7613_1636 PF12867 DinB superfamily BEST7613_1636 PF03781 Sulfatase-modifying factor enzyme 1 BEST7613_1637 PF01565 FAD binding domain BEST7613_1638 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1638 PF00563 EAL domain BEST7613_1638 PF03707 Bacterial signalling protein N terminal repeat BEST7613_1641 PF01790 Prolipoprotein diacylglyceryl transferase BEST7613_1643 PF01218 Coproporphyrinogen III oxidase BEST7613_1644 PF01126 Heme oxygenase BEST7613_1646 PF00830 Ribosomal L28 family BEST7613_1649 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEST7613_1649 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEST7613_1650 PF03239 Iron permease FTR1 family BEST7613_1651 PF02767 DNA polymerase III beta subunit, central domain BEST7613_1651 PF00712 DNA polymerase III beta subunit, N-terminal domain BEST7613_1651 PF02768 DNA polymerase III beta subunit, C-terminal domain BEST7613_1652 PF00290 Tryptophan synthase alpha chain BEST7613_1655 PF00155 Aminotransferase class I and II BEST7613_1657 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BEST7613_1658 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_1658 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEST7613_1660 PF18152 DAHP synthase ferredoxin-like domain BEST7613_1660 PF00793 DAHP synthetase I family BEST7613_1662 PF00312 Ribosomal protein S15 BEST7613_1663 PF03773 Predicted permease BEST7613_1666 PF00502 Phycobilisome protein BEST7613_1667 PF00438 S-adenosylmethionine synthetase, N-terminal domain BEST7613_1667 PF02772 S-adenosylmethionine synthetase, central domain BEST7613_1667 PF02773 S-adenosylmethionine synthetase, C-terminal domain BEST7613_1668 PF01207 Dihydrouridine synthase (Dus) BEST7613_1669 PF05685 Putative restriction endonuclease BEST7613_1670 PF00707 Translation initiation factor IF-3, C-terminal domain BEST7613_1670 PF05198 Translation initiation factor IF-3, N-terminal domain BEST7613_1673 PF02706 Chain length determinant protein BEST7613_1673 PF13807 G-rich domain on putative tyrosine kinase BEST7613_1673 PF13614 AAA domain BEST7613_1680 PF00005 ABC transporter BEST7613_1680 PF14524 Wzt C-terminal domain BEST7613_1681 PF00483 Nucleotidyl transferase BEST7613_1682 PF16363 GDP-mannose 4,6 dehydratase BEST7613_1683 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BEST7613_1684 PF08484 C-methyltransferase C-terminal domain BEST7613_1684 PF08421 Putative zinc binding domain BEST7613_1689 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEST7613_1690 PF02142 MGS-like domain BEST7613_1690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_1690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEST7613_1691 PF16363 GDP-mannose 4,6 dehydratase BEST7613_1693 PF04989 Cephalosporin hydroxylase BEST7613_1696 PF00535 Glycosyl transferase family 2 BEST7613_1697 PF13439 Glycosyltransferase Family 4 BEST7613_1697 PF00534 Glycosyl transferases group 1 BEST7613_1698 PF00535 Glycosyl transferase family 2 BEST7613_1699 PF13439 Glycosyltransferase Family 4 BEST7613_1699 PF00534 Glycosyl transferases group 1 BEST7613_1700 PF01370 NAD dependent epimerase/dehydratase family BEST7613_1705 PF16363 GDP-mannose 4,6 dehydratase BEST7613_1709 PF13439 Glycosyltransferase Family 4 BEST7613_1709 PF00534 Glycosyl transferases group 1 BEST7613_1710 PF00534 Glycosyl transferases group 1 BEST7613_1710 PF13439 Glycosyltransferase Family 4 BEST7613_1711 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BEST7613_1713 PF16363 GDP-mannose 4,6 dehydratase BEST7613_1719 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_1722 PF01266 FAD dependent oxidoreductase BEST7613_1724 PF01062 Bestrophin, RFP-TM, chloride channel BEST7613_1725 PF00549 CoA-ligase BEST7613_1725 PF08442 ATP-grasp domain BEST7613_1726 PF03741 Integral membrane protein TerC family BEST7613_1727 PF15975 Flotillin BEST7613_1727 PF01145 SPFH domain / Band 7 family BEST7613_1728 PF00535 Glycosyl transferase family 2 BEST7613_1729 PF01926 50S ribosome-binding GTPase BEST7613_1729 PF01018 GTP1/OBG BEST7613_1731 PF00753 Metallo-beta-lactamase superfamily BEST7613_1731 PF16123 Hydroxyacylglutathione hydrolase C-terminus BEST7613_1733 PF00909 Ammonium Transporter Family BEST7613_1734 PF00072 Response regulator receiver domain BEST7613_1734 PF00486 Transcriptional regulatory protein, C terminal BEST7613_1737 PF02872 5'-nucleotidase, C-terminal domain BEST7613_1737 PF00149 Calcineurin-like phosphoesterase BEST7613_1739 PF01618 MotA/TolQ/ExbB proton channel family BEST7613_1740 PF02472 Biopolymer transport protein ExbD/TolR BEST7613_1741 PF01029 NusB family BEST7613_1741 PF01189 16S rRNA methyltransferase RsmB/F BEST7613_1743 PF01699 Sodium/calcium exchanger protein BEST7613_1747 PF00486 Transcriptional regulatory protein, C terminal BEST7613_1747 PF00072 Response regulator receiver domain BEST7613_1748 PF00953 Glycosyl transferase family 4 BEST7613_1750 PF00211 Adenylate and Guanylate cyclase catalytic domain BEST7613_1750 PF00072 Response regulator receiver domain BEST7613_1752 PF07859 alpha/beta hydrolase fold BEST7613_1754 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEST7613_1755 PF00360 Phytochrome region BEST7613_1755 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1755 PF01590 GAF domain BEST7613_1755 PF00563 EAL domain BEST7613_1757 PF03600 Citrate transporter BEST7613_1757 PF02080 TrkA-C domain BEST7613_1765 PF17792 ThiD2 family BEST7613_1765 PF02581 Thiamine monophosphate synthase BEST7613_1766 PF03437 BtpA family BEST7613_1770 PF00849 RNA pseudouridylate synthase BEST7613_1771 PF00360 Phytochrome region BEST7613_1771 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1771 PF01590 GAF domain BEST7613_1771 PF00563 EAL domain BEST7613_1773 PF00999 Sodium/hydrogen exchanger family BEST7613_1775 PF03040 CemA family BEST7613_1777 PF13614 AAA domain BEST7613_1778 PF00011 Hsp20/alpha crystallin family BEST7613_1779 PF01578 Cytochrome C assembly protein BEST7613_1780 PF01638 HxlR-like helix-turn-helix BEST7613_1781 PF04055 Radical SAM superfamily BEST7613_1784 PF04483 Protein of unknown function (DUF565) BEST7613_1787 PF07465 Photosystem I protein M (PsaM) BEST7613_1789 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BEST7613_1792 PF06480 FtsH Extracellular BEST7613_1792 PF01434 Peptidase family M41 BEST7613_1792 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_1792 PF17862 AAA+ lid domain BEST7613_1793 PF01850 PIN domain BEST7613_1797 PF01934 Protein of unknown function DUF86 BEST7613_1800 PF00310 Glutamine amidotransferases class-II BEST7613_1800 PF04898 Glutamate synthase central domain BEST7613_1800 PF01493 GXGXG motif BEST7613_1800 PF01645 Conserved region in glutamate synthase BEST7613_1804 PF07995 Glucose / Sorbosone dehydrogenase BEST7613_1805 PF07685 CobB/CobQ-like glutamine amidotransferase domain BEST7613_1805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEST7613_1808 PF00501 AMP-binding enzyme BEST7613_1809 PF14332 Domain of unknown function (DUF4388) BEST7613_1809 PF00072 Response regulator receiver domain BEST7613_1810 PF00486 Transcriptional regulatory protein, C terminal BEST7613_1810 PF00072 Response regulator receiver domain BEST7613_1812 PF01590 GAF domain BEST7613_1812 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_1813 PF02405 Permease MlaE BEST7613_1814 PF02416 mttA/Hcf106 family BEST7613_1815 PF00360 Phytochrome region BEST7613_1815 PF00563 EAL domain BEST7613_1815 PF01590 GAF domain BEST7613_1815 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1816 PF13476 AAA domain BEST7613_1817 PF00684 DnaJ central domain BEST7613_1817 PF01556 DnaJ C terminal domain BEST7613_1817 PF00226 DnaJ domain BEST7613_1818 PF01783 Ribosomal L32p protein family BEST7613_1824 PF02514 CobN/Magnesium Chelatase BEST7613_1824 PF11965 Domain of unknown function (DUF3479) BEST7613_1825 PF02463 RecF/RecN/SMC N terminal domain BEST7613_1827 PF03819 MazG nucleotide pyrophosphohydrolase domain BEST7613_1829 PF00672 HAMP domain BEST7613_1829 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_1829 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_1829 PF13426 PAS domain BEST7613_1834 PF03459 TOBE domain BEST7613_1834 PF00005 ABC transporter BEST7613_1837 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BEST7613_1837 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BEST7613_1838 PF00583 Acetyltransferase (GNAT) family BEST7613_1839 PF00120 Glutamine synthetase, catalytic domain BEST7613_1839 PF03951 Glutamine synthetase, beta-Grasp domain BEST7613_1840 PF00072 Response regulator receiver domain BEST7613_1840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_1840 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_1840 PF01627 Hpt domain BEST7613_1840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEST7613_1840 PF00672 HAMP domain BEST7613_1841 PF00563 EAL domain BEST7613_1841 PF01590 GAF domain BEST7613_1841 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_1841 PF00360 Phytochrome region BEST7613_1842 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEST7613_1843 PF01812 5-formyltetrahydrofolate cyclo-ligase family BEST7613_1844 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_1847 PF02342 TerD domain BEST7613_1848 PF00282 Pyridoxal-dependent decarboxylase conserved domain BEST7613_1851 PF00795 Carbon-nitrogen hydrolase BEST7613_1852 PF01774 UreD urease accessory protein BEST7613_1855 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_1855 PF06426 Serine acetyltransferase, N-terminal BEST7613_1858 PF02511 Thymidylate synthase complementing protein BEST7613_1859 PF02533 Photosystem II 4 kDa reaction centre component BEST7613_1861 PF01722 BolA-like protein BEST7613_1862 PF00462 Glutaredoxin BEST7613_1863 PF02575 YbaB/EbfC DNA-binding family BEST7613_1865 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_1865 PF00403 Heavy-metal-associated domain BEST7613_1865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEST7613_1867 PF00449 Urease alpha-subunit, N-terminal domain BEST7613_1867 PF01979 Amidohydrolase family BEST7613_1870 PF00805 Pentapeptide repeats (8 copies) BEST7613_1874 PF02779 Transketolase, pyrimidine binding domain BEST7613_1874 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BEST7613_1874 PF02780 Transketolase, C-terminal domain BEST7613_1875 PF00301 Rubredoxin BEST7613_1876 PF14870 Photosynthesis system II assembly factor YCF48 BEST7613_1877 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit BEST7613_1877 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits BEST7613_1878 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits BEST7613_1879 PF02419 PsbL protein BEST7613_1880 PF01788 PsbJ BEST7613_1881 PF00696 Amino acid kinase family BEST7613_1881 PF01472 PUA domain BEST7613_1882 PF13546 DDE superfamily endonuclease BEST7613_1884 PF01609 Transposase DDE domain BEST7613_1888 PF00521 DNA gyrase/topoisomerase IV, subunit A BEST7613_1888 PF03989 DNA gyrase C-terminal domain, beta-propeller BEST7613_1890 PF06167 Glucose-regulated metallo-peptidase M90 BEST7613_1896 PF01297 Zinc-uptake complex component A periplasmic BEST7613_1897 PF00005 ABC transporter BEST7613_1898 PF00950 ABC 3 transport family BEST7613_1901 PF02562 PhoH-like protein BEST7613_1903 PF09367 CpeS-like protein BEST7613_1904 PF00427 Phycobilisome Linker polypeptide BEST7613_1907 PF00561 alpha/beta hydrolase fold BEST7613_1908 PF00226 DnaJ domain BEST7613_1908 PF01556 DnaJ C terminal domain BEST7613_1909 PF00012 Hsp70 protein BEST7613_1910 PF00464 Serine hydroxymethyltransferase BEST7613_1916 PF04966 Carbohydrate-selective porin, OprB family BEST7613_1917 PF00486 Transcriptional regulatory protein, C terminal BEST7613_1917 PF00072 Response regulator receiver domain BEST7613_1918 PF04122 Putative cell wall binding repeat 2 BEST7613_1918 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_1927 PF12697 Alpha/beta hydrolase family BEST7613_1928 PF12697 Alpha/beta hydrolase family BEST7613_1930 PF03793 PASTA domain BEST7613_1930 PF03717 Penicillin-binding Protein dimerisation domain BEST7613_1930 PF00905 Penicillin binding protein transpeptidase domain BEST7613_1932 PF13183 4Fe-4S dicluster domain BEST7613_1932 PF02754 Cysteine-rich domain BEST7613_1934 PF03109 ABC1 family BEST7613_1936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_1936 PF03466 LysR substrate binding domain BEST7613_1938 PF02567 Phenazine biosynthesis-like protein BEST7613_1940 PF04055 Radical SAM superfamily BEST7613_1940 PF01938 TRAM domain BEST7613_1940 PF00919 Uncharacterized protein family UPF0004 BEST7613_1941 PF04055 Radical SAM superfamily BEST7613_1941 PF01938 TRAM domain BEST7613_1941 PF00919 Uncharacterized protein family UPF0004 BEST7613_1946 PF00999 Sodium/hydrogen exchanger family BEST7613_1946 PF02254 TrkA-N domain BEST7613_1947 PF00202 Aminotransferase class-III BEST7613_1951 PF00756 Putative esterase BEST7613_1952 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_1952 PF00107 Zinc-binding dehydrogenase BEST7613_1954 PF17863 AAA lid domain BEST7613_1954 PF01078 Magnesium chelatase, subunit ChlI BEST7613_1955 PF00579 tRNA synthetases class I (W and Y) BEST7613_1955 PF01479 S4 domain BEST7613_1958 PF00579 tRNA synthetases class I (W and Y) BEST7613_1958 PF01479 S4 domain BEST7613_1959 PF00436 Single-strand binding protein family BEST7613_1962 PF00924 Mechanosensitive ion channel BEST7613_1964 PF00072 Response regulator receiver domain BEST7613_1964 PF00486 Transcriptional regulatory protein, C terminal BEST7613_1965 PF01266 FAD dependent oxidoreductase BEST7613_1965 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BEST7613_1969 PF01209 ubiE/COQ5 methyltransferase family BEST7613_1971 PF10502 Signal peptidase, peptidase S26 BEST7613_1973 PF01654 Cytochrome bd terminal oxidase subunit I BEST7613_1974 PF02322 Cytochrome bd terminal oxidase subunit II BEST7613_1975 PF02390 Putative methyltransferase BEST7613_1976 PF00871 Acetokinase family BEST7613_1977 PF01738 Dienelactone hydrolase family BEST7613_1984 PF00355 Rieske [2Fe-2S] domain BEST7613_1984 PF00111 2Fe-2S iron-sulfur cluster binding domain BEST7613_1986 PF00072 Response regulator receiver domain BEST7613_1986 PF01584 CheW-like domain BEST7613_1986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_1986 PF01627 Hpt domain BEST7613_1987 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_1987 PF01590 GAF domain BEST7613_1989 PF00072 Response regulator receiver domain BEST7613_1990 PF14332 Domain of unknown function (DUF4388) BEST7613_1990 PF00072 Response regulator receiver domain BEST7613_1991 PF00773 RNB domain BEST7613_1993 PF01434 Peptidase family M41 BEST7613_1993 PF17862 AAA+ lid domain BEST7613_1993 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_1996 PF02421 Ferrous iron transport protein B BEST7613_1996 PF07664 Ferrous iron transport protein B C terminus BEST7613_1996 PF07670 Nucleoside recognition BEST7613_1998 PF18698 Histidine kinase sensor domain BEST7613_1998 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_1998 PF00672 HAMP domain BEST7613_1998 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_1998 PF00989 PAS fold BEST7613_1999 PF02681 Divergent PAP2 family BEST7613_2001 PF00440 Bacterial regulatory proteins, tetR family BEST7613_2006 PF04055 Radical SAM superfamily BEST7613_2008 PF08486 Stage II sporulation protein BEST7613_2011 PF12826 Helix-hairpin-helix motif BEST7613_2011 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BEST7613_2011 PF01653 NAD-dependent DNA ligase adenylation domain BEST7613_2011 PF00533 BRCA1 C Terminus (BRCT) domain BEST7613_2011 PF03120 NAD-dependent DNA ligase OB-fold domain BEST7613_2013 PF10531 SLBB domain BEST7613_2013 PF02563 Polysaccharide biosynthesis/export protein BEST7613_2013 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BEST7613_2016 PF02403 Seryl-tRNA synthetase N-terminal domain BEST7613_2016 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEST7613_2017 PF01383 CpcD/allophycocyanin linker domain BEST7613_2018 PF01383 CpcD/allophycocyanin linker domain BEST7613_2018 PF00427 Phycobilisome Linker polypeptide BEST7613_2019 PF01383 CpcD/allophycocyanin linker domain BEST7613_2019 PF00427 Phycobilisome Linker polypeptide BEST7613_2020 PF00502 Phycobilisome protein BEST7613_2021 PF00502 Phycobilisome protein BEST7613_2025 PF00069 Protein kinase domain BEST7613_2026 PF00069 Protein kinase domain BEST7613_2028 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BEST7613_2029 PF01370 NAD dependent epimerase/dehydratase family BEST7613_2031 PF01551 Peptidase family M23 BEST7613_2032 PF02811 PHP domain BEST7613_2032 PF01336 OB-fold nucleic acid binding domain BEST7613_2032 PF14579 Helix-hairpin-helix motif BEST7613_2032 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEST7613_2032 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEST7613_2035 PF00905 Penicillin binding protein transpeptidase domain BEST7613_2035 PF00912 Transglycosylase BEST7613_2035 PF17092 Penicillin-binding protein OB-like domain BEST7613_2037 PF00005 ABC transporter BEST7613_2037 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEST7613_2041 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEST7613_2044 PF13244 Domain of unknown function (DUF4040) BEST7613_2044 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEST7613_2044 PF00361 Proton-conducting membrane transporter BEST7613_2051 PF00027 Cyclic nucleotide-binding domain BEST7613_2051 PF13545 Crp-like helix-turn-helix domain BEST7613_2056 PF00664 ABC transporter transmembrane region BEST7613_2056 PF00005 ABC transporter BEST7613_2058 PF00403 Heavy-metal-associated domain BEST7613_2059 PF00698 Acyl transferase domain BEST7613_2060 PF00486 Transcriptional regulatory protein, C terminal BEST7613_2060 PF00072 Response regulator receiver domain BEST7613_2062 PF04055 Radical SAM superfamily BEST7613_2063 PF01467 Cytidylyltransferase-like BEST7613_2065 PF00809 Pterin binding enzyme BEST7613_2067 PF17806 Sarcosine oxidase A3 domain BEST7613_2067 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_2067 PF08669 Glycine cleavage T-protein C-terminal barrel domain BEST7613_2067 PF01571 Aminomethyltransferase folate-binding domain BEST7613_2071 PF17876 Cold shock domain BEST7613_2071 PF08206 Ribonuclease B OB domain BEST7613_2071 PF00773 RNB domain BEST7613_2071 PF00575 S1 RNA binding domain BEST7613_2073 PF07228 Stage II sporulation protein E (SpoIIE) BEST7613_2073 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BEST7613_2075 PF14698 Argininosuccinate lyase C-terminal BEST7613_2075 PF00206 Lyase BEST7613_2076 PF00293 NUDIX domain BEST7613_2076 PF09297 NADH pyrophosphatase zinc ribbon domain BEST7613_2079 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEST7613_2079 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BEST7613_2080 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEST7613_2081 PF00510 Cytochrome c oxidase subunit III BEST7613_2082 PF00085 Thioredoxin BEST7613_2084 PF00005 ABC transporter BEST7613_2085 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2087 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEST7613_2088 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BEST7613_2089 PF00491 Arginase family BEST7613_2091 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_2092 PF00690 Cation transporter/ATPase, N-terminus BEST7613_2092 PF00689 Cation transporting ATPase, C-terminus BEST7613_2094 PF08264 Anticodon-binding domain of tRNA BEST7613_2094 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_2094 PF13603 Leucyl-tRNA synthetase, Domain 2 BEST7613_2094 PF09334 tRNA synthetases class I (M) BEST7613_2095 PF03616 Sodium/glutamate symporter BEST7613_2097 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2097 PF07689 KaiB domain BEST7613_2099 PF00005 ABC transporter BEST7613_2099 PF00664 ABC transporter transmembrane region BEST7613_2103 PF00456 Transketolase, thiamine diphosphate binding domain BEST7613_2103 PF02780 Transketolase, C-terminal domain BEST7613_2103 PF02779 Transketolase, pyrimidine binding domain BEST7613_2104 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_2104 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_2105 PF00550 Phosphopantetheine attachment site BEST7613_2108 PF00210 Ferritin-like domain BEST7613_2110 PF01386 Ribosomal L25p family BEST7613_2111 PF00709 Adenylosuccinate synthetase BEST7613_2113 PF01197 Ribosomal protein L31 BEST7613_2114 PF00380 Ribosomal protein S9/S16 BEST7613_2115 PF00572 Ribosomal protein L13 BEST7613_2116 PF01416 tRNA pseudouridine synthase BEST7613_2117 PF01196 Ribosomal protein L17 BEST7613_2118 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BEST7613_2118 PF01000 RNA polymerase Rpb3/RpoA insert domain BEST7613_2118 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BEST7613_2119 PF00411 Ribosomal protein S11 BEST7613_2120 PF00416 Ribosomal protein S13/S18 BEST7613_2121 PF00444 Ribosomal protein L36 BEST7613_2122 PF01176 Translation initiation factor 1A / IF-1 BEST7613_2124 PF00344 SecY translocase BEST7613_2125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BEST7613_2126 PF00333 Ribosomal protein S5, N-terminal domain BEST7613_2126 PF03719 Ribosomal protein S5, C-terminal domain BEST7613_2127 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BEST7613_2128 PF00347 Ribosomal protein L6 BEST7613_2129 PF00410 Ribosomal protein S8 BEST7613_2130 PF00281 Ribosomal protein L5 BEST7613_2130 PF00673 ribosomal L5P family C-terminus BEST7613_2131 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BEST7613_2131 PF00467 KOW motif BEST7613_2132 PF00238 Ribosomal protein L14p/L23e BEST7613_2133 PF00366 Ribosomal protein S17 BEST7613_2134 PF00831 Ribosomal L29 protein BEST7613_2135 PF00252 Ribosomal protein L16p/L10e BEST7613_2136 PF00189 Ribosomal protein S3, C-terminal domain BEST7613_2136 PF07650 KH domain BEST7613_2137 PF00237 Ribosomal protein L22p/L17e BEST7613_2138 PF00203 Ribosomal protein S19 BEST7613_2139 PF00181 Ribosomal Proteins L2, RNA binding domain BEST7613_2139 PF03947 Ribosomal Proteins L2, C-terminal domain BEST7613_2140 PF00276 Ribosomal protein L23 BEST7613_2141 PF00573 Ribosomal protein L4/L1 family BEST7613_2142 PF00297 Ribosomal protein L3 BEST7613_2143 PF00210 Ferritin-like domain BEST7613_2147 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEST7613_2149 PF00696 Amino acid kinase family BEST7613_2150 PF01730 UreF BEST7613_2152 PF00005 ABC transporter BEST7613_2157 PF05000 RNA polymerase Rpb1, domain 4 BEST7613_2157 PF04983 RNA polymerase Rpb1, domain 3 BEST7613_2157 PF04998 RNA polymerase Rpb1, domain 5 BEST7613_2158 PF04563 RNA polymerase beta subunit BEST7613_2158 PF04561 RNA polymerase Rpb2, domain 2 BEST7613_2158 PF04565 RNA polymerase Rpb2, domain 3 BEST7613_2158 PF10385 RNA polymerase beta subunit external 1 domain BEST7613_2158 PF00562 RNA polymerase Rpb2, domain 6 BEST7613_2158 PF04560 RNA polymerase Rpb2, domain 7 BEST7613_2159 PF01026 TatD related DNase BEST7613_2160 PF01649 Ribosomal protein S20 BEST7613_2161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2161 PF16736 Single Cache-like BEST7613_2161 PF00989 PAS fold BEST7613_2161 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2163 PF00580 UvrD/REP helicase N-terminal domain BEST7613_2163 PF13361 UvrD-like helicase C-terminal domain BEST7613_2163 PF00580 UvrD/REP helicase N-terminal domain BEST7613_2163 PF13361 UvrD-like helicase C-terminal domain BEST7613_2164 PF06470 SMC proteins Flexible Hinge Domain BEST7613_2164 PF02463 RecF/RecN/SMC N terminal domain BEST7613_2165 PF01636 Phosphotransferase enzyme family BEST7613_2170 PF17782 DprA winged helix domain BEST7613_2170 PF02481 DNA recombination-mediator protein A BEST7613_2171 PF01906 Putative heavy-metal-binding BEST7613_2173 PF00578 AhpC/TSA family BEST7613_2173 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEST7613_2174 PF08676 MutL C terminal dimerisation domain BEST7613_2174 PF01119 DNA mismatch repair protein, C-terminal domain BEST7613_2175 PF02653 Branched-chain amino acid transport system / permease component BEST7613_2177 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2179 PF13180 PDZ domain BEST7613_2184 PF00596 Class II Aldolase and Adducin N-terminal domain BEST7613_2187 PF02514 CobN/Magnesium Chelatase BEST7613_2188 PF01590 GAF domain BEST7613_2188 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_2188 PF00360 Phytochrome region BEST7613_2188 PF00563 EAL domain BEST7613_2189 PF12833 Helix-turn-helix domain BEST7613_2189 PF01965 DJ-1/PfpI family BEST7613_2190 PF00072 Response regulator receiver domain BEST7613_2190 PF14332 Domain of unknown function (DUF4388) BEST7613_2192 PF01220 Dehydroquinase class II BEST7613_2194 PF03448 MgtE intracellular N domain BEST7613_2194 PF01769 Divalent cation transporter BEST7613_2194 PF00571 CBS domain BEST7613_2195 PF00534 Glycosyl transferases group 1 BEST7613_2195 PF13439 Glycosyltransferase Family 4 BEST7613_2200 PF05958 tRNA (Uracil-5-)-methyltransferase BEST7613_2200 PF01938 TRAM domain BEST7613_2201 PF00585 C-terminal regulatory domain of Threonine dehydratase BEST7613_2201 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_2202 PF04472 Cell division protein SepF BEST7613_2204 PF01050 Mannose-6-phosphate isomerase BEST7613_2204 PF00483 Nucleotidyl transferase BEST7613_2207 PF00166 Chaperonin 10 Kd subunit BEST7613_2208 PF00118 TCP-1/cpn60 chaperonin family BEST7613_2209 PF03707 Bacterial signalling protein N terminal repeat BEST7613_2209 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_2209 PF00563 EAL domain BEST7613_2210 PF00293 NUDIX domain BEST7613_2212 PF01264 Chorismate synthase BEST7613_2213 PF16320 Ribosomal protein L7/L12 dimerisation domain BEST7613_2213 PF00542 Ribosomal protein L7/L12 C-terminal domain BEST7613_2214 PF00466 Ribosomal protein L10 BEST7613_2215 PF00687 Ribosomal protein L1p/L10e family BEST7613_2216 PF00298 Ribosomal protein L11, RNA binding domain BEST7613_2216 PF03946 Ribosomal protein L11, N-terminal domain BEST7613_2217 PF02357 Transcription termination factor nusG BEST7613_2217 PF00467 KOW motif BEST7613_2218 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BEST7613_2219 PF01245 Ribosomal protein L19 BEST7613_2224 PF16166 Chloroplast import apparatus Tic20-like BEST7613_2225 PF00111 2Fe-2S iron-sulfur cluster binding domain BEST7613_2226 PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) BEST7613_2227 PF00561 alpha/beta hydrolase fold BEST7613_2229 PF02469 Fasciclin domain BEST7613_2231 PF00361 Proton-conducting membrane transporter BEST7613_2232 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEST7613_2232 PF00361 Proton-conducting membrane transporter BEST7613_2232 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BEST7613_2234 PF00223 Photosystem I psaA/psaB protein BEST7613_2235 PF00223 Photosystem I psaA/psaB protein BEST7613_2237 PF00005 ABC transporter BEST7613_2237 PF00664 ABC transporter transmembrane region BEST7613_2238 PF13439 Glycosyltransferase Family 4 BEST7613_2238 PF00534 Glycosyl transferases group 1 BEST7613_2239 PF00534 Glycosyl transferases group 1 BEST7613_2239 PF13439 Glycosyltransferase Family 4 BEST7613_2241 PF00486 Transcriptional regulatory protein, C terminal BEST7613_2241 PF00072 Response regulator receiver domain BEST7613_2242 PF00364 Biotin-requiring enzyme BEST7613_2242 PF02779 Transketolase, pyrimidine binding domain BEST7613_2242 PF02780 Transketolase, C-terminal domain BEST7613_2243 PF00936 BMC domain BEST7613_2244 PF00936 BMC domain BEST7613_2245 PF02595 Glycerate kinase family BEST7613_2246 PF04966 Carbohydrate-selective porin, OprB family BEST7613_2246 PF00395 S-layer homology domain BEST7613_2247 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_2248 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BEST7613_2248 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BEST7613_2249 PF17755 UvrA DNA-binding domain BEST7613_2249 PF17760 UvrA interaction domain BEST7613_2255 PF00155 Aminotransferase class I and II BEST7613_2256 PF00216 Bacterial DNA-binding protein BEST7613_2259 PF00270 DEAD/DEAH box helicase BEST7613_2259 PF00271 Helicase conserved C-terminal domain BEST7613_2259 PF16124 RecQ zinc-binding BEST7613_2261 PF01888 CbiD BEST7613_2262 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BEST7613_2265 PF02542 YgbB family BEST7613_2270 PF04542 Sigma-70 region 2 BEST7613_2270 PF08281 Sigma-70, region 4 BEST7613_2273 PF13439 Glycosyltransferase Family 4 BEST7613_2274 PF02416 mttA/Hcf106 family BEST7613_2275 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BEST7613_2276 PF17862 AAA+ lid domain BEST7613_2276 PF06480 FtsH Extracellular BEST7613_2276 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_2276 PF01434 Peptidase family M41 BEST7613_2277 PF00586 AIR synthase related protein, N-terminal domain BEST7613_2277 PF02769 AIR synthase related protein, C-terminal domain BEST7613_2279 PF01975 Survival protein SurE BEST7613_2280 PF01327 Polypeptide deformylase BEST7613_2282 PF00152 tRNA synthetases class II (D, K and N) BEST7613_2282 PF01336 OB-fold nucleic acid binding domain BEST7613_2289 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEST7613_2289 PF00384 Molybdopterin oxidoreductase BEST7613_2289 PF01568 Molydopterin dinucleotide binding domain BEST7613_2290 PF00005 ABC transporter BEST7613_2291 PF00005 ABC transporter BEST7613_2292 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2296 PF03330 Lytic transglycolase BEST7613_2297 PF12327 FtsZ family, C-terminal domain BEST7613_2297 PF00091 Tubulin/FtsZ family, GTPase domain BEST7613_2299 PF03572 Peptidase family S41 BEST7613_2299 PF00595 PDZ domain BEST7613_2301 PF01795 MraW methylase family BEST7613_2303 PF02814 UreE urease accessory protein, N-terminal domain BEST7613_2303 PF05194 UreE urease accessory protein, C-terminal domain BEST7613_2309 PF00580 UvrD/REP helicase N-terminal domain BEST7613_2309 PF13361 UvrD-like helicase C-terminal domain BEST7613_2310 PF02577 Bifunctional nuclease BEST7613_2311 PF08338 Domain of unknown function (DUF1731) BEST7613_2311 PF01370 NAD dependent epimerase/dehydratase family BEST7613_2313 PF00069 Protein kinase domain BEST7613_2314 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_2315 PF01259 SAICAR synthetase BEST7613_2317 PF07244 Surface antigen variable number repeat BEST7613_2317 PF01103 Surface antigen BEST7613_2318 PF16658 Class II release factor RF3, C-terminal domain BEST7613_2318 PF00009 Elongation factor Tu GTP binding domain BEST7613_2319 PF00916 Sulfate permease family BEST7613_2319 PF01740 STAS domain BEST7613_2320 PF00582 Universal stress protein family BEST7613_2324 PF02910 Fumarate reductase flavoprotein C-term BEST7613_2324 PF00890 FAD binding domain BEST7613_2325 PF00148 Nitrogenase component 1 type Oxidoreductase BEST7613_2325 PF08369 Proto-chlorophyllide reductase 57 kD subunit BEST7613_2326 PF01230 HIT domain BEST7613_2327 PF12697 Alpha/beta hydrolase family BEST7613_2332 PF07969 Amidohydrolase family BEST7613_2335 PF00561 alpha/beta hydrolase fold BEST7613_2337 PF00462 Glutaredoxin BEST7613_2338 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BEST7613_2338 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BEST7613_2340 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_2341 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BEST7613_2341 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEST7613_2341 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BEST7613_2346 PF02233 NAD(P) transhydrogenase beta subunit BEST7613_2347 PF01523 Putative modulator of DNA gyrase BEST7613_2351 PF08264 Anticodon-binding domain of tRNA BEST7613_2351 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_2353 PF12169 DNA polymerase III subunits gamma and tau domain III BEST7613_2358 PF00190 Cupin BEST7613_2359 PF00343 Carbohydrate phosphorylase BEST7613_2364 PF00069 Protein kinase domain BEST7613_2367 PF02272 DHHA1 domain BEST7613_2367 PF17768 RecJ OB domain BEST7613_2367 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BEST7613_2367 PF01368 DHH family BEST7613_2368 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEST7613_2368 PF00672 HAMP domain BEST7613_2368 PF00072 Response regulator receiver domain BEST7613_2368 PF01627 Hpt domain BEST7613_2368 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2370 PF00294 pfkB family carbohydrate kinase BEST7613_2374 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_2375 PF08331 Domain of unknown function (DUF1730) BEST7613_2376 PF00885 6,7-dimethyl-8-ribityllumazine synthase BEST7613_2377 PF01737 YCF9 BEST7613_2378 PF01435 Peptidase family M48 BEST7613_2379 PF00575 S1 RNA binding domain BEST7613_2381 PF02463 RecF/RecN/SMC N terminal domain BEST7613_2382 PF00664 ABC transporter transmembrane region BEST7613_2382 PF00005 ABC transporter BEST7613_2383 PF00224 Pyruvate kinase, barrel domain BEST7613_2383 PF02887 Pyruvate kinase, alpha/beta domain BEST7613_2383 PF00391 PEP-utilising enzyme, mobile domain BEST7613_2386 PF03976 Polyphosphate kinase 2 (PPK2) BEST7613_2387 PF06968 Biotin and Thiamin Synthesis associated domain BEST7613_2387 PF04055 Radical SAM superfamily BEST7613_2388 PF02632 BioY family BEST7613_2389 PF01252 Signal peptidase (SPase) II BEST7613_2393 PF04966 Carbohydrate-selective porin, OprB family BEST7613_2396 PF00343 Carbohydrate phosphorylase BEST7613_2397 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_2403 PF01741 Large-conductance mechanosensitive channel, MscL BEST7613_2404 PF01330 RuvA N terminal domain BEST7613_2404 PF07499 RuvA, C-terminal domain BEST7613_2405 PF01940 Integral membrane protein DUF92 BEST7613_2406 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_2407 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BEST7613_2408 PF01425 Amidase BEST7613_2409 PF01476 LysM domain BEST7613_2409 PF08525 Opacity-associated protein A N-terminal motif BEST7613_2409 PF01551 Peptidase family M23 BEST7613_2410 PF01597 Glycine cleavage H-protein BEST7613_2412 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEST7613_2413 PF00762 Ferrochelatase BEST7613_2418 PF03816 Cell envelope-related transcriptional attenuator domain BEST7613_2420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEST7613_2420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEST7613_2422 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BEST7613_2423 PF04055 Radical SAM superfamily BEST7613_2429 PF03109 ABC1 family BEST7613_2430 PF03109 ABC1 family BEST7613_2432 PF08459 UvrC Helix-hairpin-helix N-terminal BEST7613_2432 PF02151 UvrB/uvrC motif BEST7613_2432 PF01541 GIY-YIG catalytic domain BEST7613_2432 PF12826 Helix-hairpin-helix motif BEST7613_2433 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_2433 PF11741 AMIN domain BEST7613_2437 PF13580 SIS domain BEST7613_2439 PF01333 Apocytochrome F, C-terminal BEST7613_2439 PF16639 Apocytochrome F, N-terminal BEST7613_2440 PF00355 Rieske [2Fe-2S] domain BEST7613_2441 PF00737 Photosystem II 10 kDa phosphoprotein BEST7613_2442 PF02468 Photosystem II reaction centre N protein (psbN) BEST7613_2445 PF03480 Bacterial extracellular solute-binding protein, family 7 BEST7613_2450 PF00400 WD domain, G-beta repeat BEST7613_2451 PF00400 WD domain, G-beta repeat BEST7613_2454 PF00561 alpha/beta hydrolase fold BEST7613_2455 PF01261 Xylose isomerase-like TIM barrel BEST7613_2459 PF03992 Antibiotic biosynthesis monooxygenase BEST7613_2464 PF01740 STAS domain BEST7613_2465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEST7613_2465 PF00128 Alpha amylase, catalytic domain BEST7613_2466 PF01740 STAS domain BEST7613_2467 PF07228 Stage II sporulation protein E (SpoIIE) BEST7613_2467 PF00672 HAMP domain BEST7613_2470 PF01609 Transposase DDE domain BEST7613_2475 PF02885 Glycosyl transferase family, helical bundle domain BEST7613_2475 PF00591 Glycosyl transferase family, a/b domain BEST7613_2476 PF01791 DeoC/LacD family aldolase BEST7613_2484 PF02678 Pirin BEST7613_2484 PF17954 Quercetinase C-terminal cupin domain BEST7613_2485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_2485 PF03466 LysR substrate binding domain BEST7613_2486 PF01713 Smr domain BEST7613_2486 PF00488 MutS domain V BEST7613_2488 PF03109 ABC1 family BEST7613_2493 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2495 PF07478 D-ala D-ala ligase C-terminus BEST7613_2495 PF01820 D-ala D-ala ligase N-terminus BEST7613_2496 PF06055 Exopolysaccharide synthesis, ExoD BEST7613_2497 PF02617 ATP-dependent Clp protease adaptor protein ClpS BEST7613_2499 PF01250 Ribosomal protein S6 BEST7613_2500 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEST7613_2501 PF03130 PBS lyase HEAT-like repeat BEST7613_2502 PF04055 Radical SAM superfamily BEST7613_2507 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_2509 PF08544 GHMP kinases C terminal BEST7613_2509 PF00288 GHMP kinases N terminal domain BEST7613_2511 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEST7613_2511 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEST7613_2511 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEST7613_2511 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEST7613_2512 PF00037 4Fe-4S binding domain BEST7613_2513 PF00005 ABC transporter BEST7613_2514 PF01687 Riboflavin kinase BEST7613_2514 PF06574 FAD synthetase BEST7613_2518 PF00579 tRNA synthetases class I (W and Y) BEST7613_2520 PF01966 HD domain BEST7613_2523 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BEST7613_2523 PF03900 Porphobilinogen deaminase, C-terminal domain BEST7613_2524 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEST7613_2524 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEST7613_2525 PF01515 Phosphate acetyl/butaryl transferase BEST7613_2525 PF07085 DRTGG domain BEST7613_2527 PF03749 Sugar fermentation stimulation protein RE domain BEST7613_2527 PF17746 SfsA N-terminal OB domain BEST7613_2529 PF04545 Sigma-70, region 4 BEST7613_2529 PF04539 Sigma-70 region 3 BEST7613_2529 PF04542 Sigma-70 region 2 BEST7613_2529 PF00140 Sigma-70 factor, region 1.2 BEST7613_2531 PF04055 Radical SAM superfamily BEST7613_2532 PF02875 Mur ligase family, glutamate ligase domain BEST7613_2532 PF08245 Mur ligase middle domain BEST7613_2533 PF05193 Peptidase M16 inactive domain BEST7613_2533 PF00675 Insulinase (Peptidase family M16) BEST7613_2534 PF00675 Insulinase (Peptidase family M16) BEST7613_2534 PF05193 Peptidase M16 inactive domain BEST7613_2537 PF04551 GcpE protein BEST7613_2540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2540 PF00204 DNA gyrase B BEST7613_2540 PF00986 DNA gyrase B subunit, carboxyl terminus BEST7613_2540 PF01751 Toprim domain BEST7613_2542 PF06298 Photosystem II protein Y (PsbY) BEST7613_2543 PF02574 Homocysteine S-methyltransferase BEST7613_2543 PF02219 Methylenetetrahydrofolate reductase BEST7613_2545 PF00266 Aminotransferase class-V BEST7613_2548 PF02086 D12 class N6 adenine-specific DNA methyltransferase BEST7613_2552 PF00196 Bacterial regulatory proteins, luxR family BEST7613_2552 PF00072 Response regulator receiver domain BEST7613_2553 PF00360 Phytochrome region BEST7613_2553 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_2553 PF00563 EAL domain BEST7613_2553 PF01590 GAF domain BEST7613_2555 PF01343 Peptidase family S49 BEST7613_2556 PF10726 Protein of function (DUF2518) BEST7613_2557 PF12697 Alpha/beta hydrolase family BEST7613_2558 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BEST7613_2558 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BEST7613_2558 PF01488 Shikimate / quinate 5-dehydrogenase BEST7613_2560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEST7613_2562 PF04015 Domain of unknown function (DUF362) BEST7613_2570 PF07963 Prokaryotic N-terminal methylation motif BEST7613_2570 PF14245 Type IV pilin PilA BEST7613_2571 PF14245 Type IV pilin PilA BEST7613_2571 PF07963 Prokaryotic N-terminal methylation motif BEST7613_2572 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus BEST7613_2572 PF05175 Methyltransferase small domain BEST7613_2576 PF00805 Pentapeptide repeats (8 copies) BEST7613_2577 PF00140 Sigma-70 factor, region 1.2 BEST7613_2577 PF04545 Sigma-70, region 4 BEST7613_2577 PF04539 Sigma-70 region 3 BEST7613_2577 PF04542 Sigma-70 region 2 BEST7613_2578 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_2580 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_2580 PF07694 5TMR of 5TMR-LYT BEST7613_2581 PF13180 PDZ domain BEST7613_2581 PF02163 Peptidase family M50 BEST7613_2582 PF00730 HhH-GPD superfamily base excision DNA repair protein BEST7613_2582 PF00633 Helix-hairpin-helix motif BEST7613_2584 PF14437 MafB19-like deaminase BEST7613_2586 PF00875 DNA photolyase BEST7613_2586 PF03441 FAD binding domain of DNA photolyase BEST7613_2589 PF01471 Putative peptidoglycan binding domain BEST7613_2589 PF10128 Glucose-6-phosphate dehydrogenase subunit BEST7613_2590 PF00005 ABC transporter BEST7613_2591 PF00717 Peptidase S24-like BEST7613_2591 PF01726 LexA DNA binding domain BEST7613_2592 PF13085 2Fe-2S iron-sulfur cluster binding domain BEST7613_2593 PF00072 Response regulator receiver domain BEST7613_2594 PF00005 ABC transporter BEST7613_2595 PF01040 UbiA prenyltransferase family BEST7613_2597 PF08534 Redoxin BEST7613_2598 PF01475 Ferric uptake regulator family BEST7613_2600 PF03912 Psb28 protein BEST7613_2601 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEST7613_2603 PF07685 CobB/CobQ-like glutamine amidotransferase domain BEST7613_2604 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_2605 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_2606 PF01177 Asp/Glu/Hydantoin racemase BEST7613_2608 PF14759 Reductase C-terminal BEST7613_2608 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_2611 PF03441 FAD binding domain of DNA photolyase BEST7613_2611 PF00875 DNA photolyase BEST7613_2614 PF08281 Sigma-70, region 4 BEST7613_2614 PF04542 Sigma-70 region 2 BEST7613_2615 PF00654 Voltage gated chloride channel BEST7613_2617 PF09367 CpeS-like protein BEST7613_2620 PF00421 Photosystem II protein BEST7613_2621 PF00124 Photosynthetic reaction centre protein BEST7613_2622 PF08299 Bacterial dnaA protein helix-turn-helix BEST7613_2622 PF11638 DnaA N-terminal domain BEST7613_2622 PF00308 Bacterial dnaA protein BEST7613_2624 PF02222 ATP-grasp domain BEST7613_2625 PF06803 Protein of unknown function (DUF1232) BEST7613_2626 PF00288 GHMP kinases N terminal domain BEST7613_2626 PF08544 GHMP kinases C terminal BEST7613_2627 PF01523 Putative modulator of DNA gyrase BEST7613_2630 PF00128 Alpha amylase, catalytic domain BEST7613_2630 PF16657 Maltogenic Amylase, C-terminal domain BEST7613_2630 PF02903 Alpha amylase, N-terminal ig-like domain BEST7613_2631 PF12848 ABC transporter BEST7613_2631 PF16326 ABC transporter C-terminal domain BEST7613_2631 PF00005 ABC transporter BEST7613_2632 PF10017 Histidine-specific methyltransferase, SAM-dependent BEST7613_2634 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BEST7613_2643 PF05190 MutS family domain IV BEST7613_2643 PF05188 MutS domain II BEST7613_2643 PF05192 MutS domain III BEST7613_2643 PF00488 MutS domain V BEST7613_2643 PF01624 MutS domain I BEST7613_2645 PF00892 EamA-like transporter family BEST7613_2648 PF00111 2Fe-2S iron-sulfur cluster binding domain BEST7613_2652 PF03466 LysR substrate binding domain BEST7613_2652 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_2658 PF07690 Major Facilitator Superfamily BEST7613_2659 PF12849 PBP superfamily domain BEST7613_2660 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2661 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2662 PF00005 ABC transporter BEST7613_2663 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEST7613_2664 PF01329 Pterin 4 alpha carbinolamine dehydratase BEST7613_2669 PF01593 Flavin containing amine oxidoreductase BEST7613_2671 PF01124 MAPEG family BEST7613_2672 PF00547 Urease, gamma subunit BEST7613_2673 PF02254 TrkA-N domain BEST7613_2673 PF07885 Ion channel BEST7613_2677 PF11127 Protein of unknown function (DUF2892) BEST7613_2677 PF00581 Rhodanese-like domain BEST7613_2680 PF07702 UTRA domain BEST7613_2680 PF00392 Bacterial regulatory proteins, gntR family BEST7613_2682 PF00459 Inositol monophosphatase family BEST7613_2683 PF00155 Aminotransferase class I and II BEST7613_2684 PF01022 Bacterial regulatory protein, arsR family BEST7613_2685 PF00230 Major intrinsic protein BEST7613_2686 PF13368 Topoisomerase C-terminal repeat BEST7613_2686 PF01751 Toprim domain BEST7613_2686 PF01131 DNA topoisomerase BEST7613_2692 PF07282 Putative transposase DNA-binding domain BEST7613_2692 PF12323 Helix-turn-helix domain BEST7613_2692 PF01385 Probable transposase BEST7613_2693 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BEST7613_2696 PF00502 Phycobilisome protein BEST7613_2697 PF00502 Phycobilisome protein BEST7613_2698 PF01383 CpcD/allophycocyanin linker domain BEST7613_2700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEST7613_2700 PF01842 ACT domain BEST7613_2700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEST7613_2702 PF00211 Adenylate and Guanylate cyclase catalytic domain BEST7613_2703 PF00255 Glutathione peroxidase BEST7613_2704 PF02803 Thiolase, C-terminal domain BEST7613_2704 PF00108 Thiolase, N-terminal domain BEST7613_2706 PF03209 PUCC protein BEST7613_2707 PF00672 HAMP domain BEST7613_2707 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEST7613_2707 PF01627 Hpt domain BEST7613_2707 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2707 PF00072 Response regulator receiver domain BEST7613_2707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2711 PF03575 Peptidase family S51 BEST7613_2712 PF08245 Mur ligase middle domain BEST7613_2712 PF08443 RimK-like ATP-grasp domain BEST7613_2712 PF02875 Mur ligase family, glutamate ligase domain BEST7613_2719 PF12631 MnmE helical domain BEST7613_2719 PF10396 GTP-binding protein TrmE N-terminus BEST7613_2719 PF01926 50S ribosome-binding GTPase BEST7613_2720 PF00690 Cation transporter/ATPase, N-terminus BEST7613_2720 PF00689 Cation transporting ATPase, C-terminus BEST7613_2722 PF02875 Mur ligase family, glutamate ligase domain BEST7613_2722 PF08245 Mur ligase middle domain BEST7613_2726 PF05685 Putative restriction endonuclease BEST7613_2729 PF02540 NAD synthase BEST7613_2731 PF07977 FabA-like domain BEST7613_2732 PF04029 2-phosphosulpholactate phosphatase BEST7613_2733 PF00881 Nitroreductase family BEST7613_2734 PF01336 OB-fold nucleic acid binding domain BEST7613_2734 PF00152 tRNA synthetases class II (D, K and N) BEST7613_2734 PF02938 GAD domain BEST7613_2736 PF00478 IMP dehydrogenase / GMP reductase domain BEST7613_2737 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2738 PF03435 Saccharopine dehydrogenase NADP binding domain BEST7613_2740 PF02653 Branched-chain amino acid transport system / permease component BEST7613_2740 PF11862 Domain of unknown function (DUF3382) BEST7613_2741 PF00950 ABC 3 transport family BEST7613_2742 PF00005 ABC transporter BEST7613_2743 PF01297 Zinc-uptake complex component A periplasmic BEST7613_2745 PF07689 KaiB domain BEST7613_2746 PF06745 KaiC BEST7613_2748 PF03466 LysR substrate binding domain BEST7613_2748 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_2749 PF00999 Sodium/hydrogen exchanger family BEST7613_2750 PF00196 Bacterial regulatory proteins, luxR family BEST7613_2750 PF00072 Response regulator receiver domain BEST7613_2751 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2751 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2751 PF18698 Histidine kinase sensor domain BEST7613_2751 PF00989 PAS fold BEST7613_2751 PF00672 HAMP domain BEST7613_2752 PF03814 Potassium-transporting ATPase A subunit BEST7613_2755 PF02669 K+-transporting ATPase, c chain BEST7613_2756 PF02702 Osmosensitive K+ channel His kinase sensor domain BEST7613_2758 PF01593 Flavin containing amine oxidoreductase BEST7613_2760 PF12557 Cob(I)alamin adenosyltransferase N terminal BEST7613_2760 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BEST7613_2762 PF08486 Stage II sporulation protein BEST7613_2763 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BEST7613_2766 PF12697 Alpha/beta hydrolase family BEST7613_2768 PF02441 Flavoprotein BEST7613_2768 PF04127 DNA / pantothenate metabolism flavoprotein BEST7613_2769 PF10742 Protein of unknown function (DUF2555) BEST7613_2771 PF00258 Flavodoxin BEST7613_2772 PF00421 Photosystem II protein BEST7613_2773 PF01926 50S ribosome-binding GTPase BEST7613_2774 PF06071 Protein of unknown function (DUF933) BEST7613_2774 PF01926 50S ribosome-binding GTPase BEST7613_2775 PF16363 GDP-mannose 4,6 dehydratase BEST7613_2777 PF10792 Protein of unknown function (DUF2605) BEST7613_2778 PF04485 Phycobilisome degradation protein nblA BEST7613_2779 PF04485 Phycobilisome degradation protein nblA BEST7613_2787 PF00005 ABC transporter BEST7613_2787 PF08402 TOBE domain BEST7613_2788 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_2790 PF00542 Ribosomal protein L7/L12 C-terminal domain BEST7613_2790 PF16320 Ribosomal protein L7/L12 dimerisation domain BEST7613_2792 PF04960 Glutaminase BEST7613_2796 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEST7613_2797 PF00510 Cytochrome c oxidase subunit III BEST7613_2799 PF01430 Hsp33 protein BEST7613_2800 PF00141 Peroxidase BEST7613_2801 PF05140 ResB-like family BEST7613_2802 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_2802 PF00205 Thiamine pyrophosphate enzyme, central domain BEST7613_2802 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_2803 PF13243 Squalene-hopene cyclase C-terminal domain BEST7613_2803 PF13249 Squalene-hopene cyclase N-terminal domain BEST7613_2804 PF13546 DDE superfamily endonuclease BEST7613_2807 PF13546 DDE superfamily endonuclease BEST7613_2810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_2810 PF00205 Thiamine pyrophosphate enzyme, central domain BEST7613_2810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_2812 PF00085 Thioredoxin BEST7613_2814 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BEST7613_2816 PF01152 Bacterial-like globin BEST7613_2817 PF00072 Response regulator receiver domain BEST7613_2817 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEST7613_2817 PF00672 HAMP domain BEST7613_2817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2817 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2817 PF01627 Hpt domain BEST7613_2818 PF00072 Response regulator receiver domain BEST7613_2819 PF00072 Response regulator receiver domain BEST7613_2820 PF07883 Cupin domain BEST7613_2821 PF02881 SRP54-type protein, helical bundle domain BEST7613_2821 PF00448 SRP54-type protein, GTPase domain BEST7613_2823 PF00672 HAMP domain BEST7613_2823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2823 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2823 PF00072 Response regulator receiver domain BEST7613_2823 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEST7613_2823 PF01627 Hpt domain BEST7613_2824 PF02660 Glycerol-3-phosphate acyltransferase BEST7613_2826 PF00156 Phosphoribosyl transferase domain BEST7613_2829 PF01758 Sodium Bile acid symporter family BEST7613_2830 PF00248 Aldo/keto reductase family BEST7613_2831 PF13180 PDZ domain BEST7613_2834 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEST7613_2834 PF03129 Anticodon binding domain BEST7613_2834 PF04073 Aminoacyl-tRNA editing domain BEST7613_2836 PF11283 Protein of unknown function (DUF3084) BEST7613_2837 PF00027 Cyclic nucleotide-binding domain BEST7613_2837 PF13545 Crp-like helix-turn-helix domain BEST7613_2841 PF04055 Radical SAM superfamily BEST7613_2841 PF06463 Molybdenum Cofactor Synthesis C BEST7613_2842 PF13439 Glycosyltransferase Family 4 BEST7613_2843 PF02386 Cation transport protein BEST7613_2844 PF02504 Fatty acid synthesis protein BEST7613_2845 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEST7613_2845 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEST7613_2849 PF01513 ATP-NAD kinase BEST7613_2850 PF11264 Thylakoid formation protein BEST7613_2855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEST7613_2855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEST7613_2856 PF00180 Isocitrate/isopropylmalate dehydrogenase BEST7613_2858 PF01040 UbiA prenyltransferase family BEST7613_2860 PF00248 Aldo/keto reductase family BEST7613_2862 PF13546 DDE superfamily endonuclease BEST7613_2866 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEST7613_2868 PF00535 Glycosyl transferase family 2 BEST7613_2873 PF00535 Glycosyl transferase family 2 BEST7613_2874 PF04199 Putative cyclase BEST7613_2876 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEST7613_2876 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEST7613_2883 PF00535 Glycosyl transferase family 2 BEST7613_2884 PF00490 Delta-aminolevulinic acid dehydratase BEST7613_2886 PF01761 3-dehydroquinate synthase BEST7613_2887 PF00873 AcrB/AcrD/AcrF family BEST7613_2893 PF01523 Putative modulator of DNA gyrase BEST7613_2894 PF05175 Methyltransferase small domain BEST7613_2895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2895 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2898 PF04607 Region found in RelA / SpoT proteins BEST7613_2898 PF02824 TGS domain BEST7613_2898 PF13291 ACT domain BEST7613_2899 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BEST7613_2899 PF05221 S-adenosyl-L-homocysteine hydrolase BEST7613_2904 PF13439 Glycosyltransferase Family 4 BEST7613_2904 PF00534 Glycosyl transferases group 1 BEST7613_2905 PF00072 Response regulator receiver domain BEST7613_2906 PF00989 PAS fold BEST7613_2906 PF01627 Hpt domain BEST7613_2906 PF00072 Response regulator receiver domain BEST7613_2906 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_2906 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_2906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_2907 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEST7613_2907 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEST7613_2908 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BEST7613_2908 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BEST7613_2909 PF00675 Insulinase (Peptidase family M16) BEST7613_2909 PF05193 Peptidase M16 inactive domain BEST7613_2910 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_2910 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_2911 PF00374 Nickel-dependent hydrogenase BEST7613_2914 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BEST7613_2915 PF00384 Molybdopterin oxidoreductase BEST7613_2915 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEST7613_2915 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BEST7613_2917 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BEST7613_2917 PF00037 4Fe-4S binding domain BEST7613_2917 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BEST7613_2920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEST7613_2920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEST7613_2920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEST7613_2920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEST7613_2922 PF13460 NAD(P)H-binding BEST7613_2925 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BEST7613_2927 PF01701 Photosystem I reaction centre subunit IX / PsaJ BEST7613_2928 PF02507 Photosystem I reaction centre subunit III BEST7613_2929 PF00814 Glycoprotease family BEST7613_2930 PF01782 RimM N-terminal domain BEST7613_2930 PF05239 PRC-barrel domain BEST7613_2931 PF16363 GDP-mannose 4,6 dehydratase BEST7613_2933 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_2936 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_2936 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_2939 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEST7613_2939 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BEST7613_2940 PF03309 Type III pantothenate kinase BEST7613_2943 PF10716 NADH dehydrogenase transmembrane subunit BEST7613_2948 PF03099 Biotin/lipoate A/B protein ligase family BEST7613_2949 PF00425 chorismate binding enzyme BEST7613_2951 PF00795 Carbon-nitrogen hydrolase BEST7613_2953 PF02397 Bacterial sugar transferase BEST7613_2955 PF02597 ThiS family BEST7613_2956 PF00834 Ribulose-phosphate 3 epimerase family BEST7613_2957 PF00689 Cation transporting ATPase, C-terminus BEST7613_2957 PF00690 Cation transporter/ATPase, N-terminus BEST7613_2959 PF01926 50S ribosome-binding GTPase BEST7613_2959 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEST7613_2963 PF16916 Dimerisation domain of Zinc Transporter BEST7613_2963 PF01545 Cation efflux family BEST7613_2964 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N BEST7613_2965 PF00889 Elongation factor TS BEST7613_2966 PF00318 Ribosomal protein S2 BEST7613_2967 PF01699 Sodium/calcium exchanger protein BEST7613_2968 PF00692 dUTPase BEST7613_2975 PF01609 Transposase DDE domain BEST7613_2976 PF00571 CBS domain BEST7613_2976 PF01595 Cyclin M transmembrane N-terminal domain BEST7613_2978 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BEST7613_2979 PF00478 IMP dehydrogenase / GMP reductase domain BEST7613_2979 PF00571 CBS domain BEST7613_2981 PF02405 Permease MlaE BEST7613_2985 PF02224 Cytidylate kinase BEST7613_2985 PF02569 Pantoate-beta-alanine ligase BEST7613_2986 PF00484 Carbonic anhydrase BEST7613_2987 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_2988 PF00342 Phosphoglucose isomerase BEST7613_2989 PF00487 Fatty acid desaturase BEST7613_2991 PF01225 Mur ligase family, catalytic domain BEST7613_2991 PF08245 Mur ligase middle domain BEST7613_2991 PF02875 Mur ligase family, glutamate ligase domain BEST7613_2992 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEST7613_2993 PF01281 Ribosomal protein L9, N-terminal domain BEST7613_2993 PF03948 Ribosomal protein L9, C-terminal domain BEST7613_2995 PF02310 B12 binding domain BEST7613_2995 PF04055 Radical SAM superfamily BEST7613_2995 PF13282 Domain of unknown function (DUF4070) BEST7613_3000 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_3001 PF01455 HupF/HypC family BEST7613_3002 PF01040 UbiA prenyltransferase family BEST7613_3003 PF02628 Cytochrome oxidase assembly protein BEST7613_3006 PF13546 DDE superfamily endonuclease BEST7613_3008 PF03480 Bacterial extracellular solute-binding protein, family 7 BEST7613_3009 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_3009 PF00498 FHA domain BEST7613_3009 PF00563 EAL domain BEST7613_3011 PF07690 Major Facilitator Superfamily BEST7613_3012 PF07690 Major Facilitator Superfamily BEST7613_3015 PF01472 PUA domain BEST7613_3015 PF00696 Amino acid kinase family BEST7613_3016 PF00171 Aldehyde dehydrogenase family BEST7613_3017 PF02566 OsmC-like protein BEST7613_3018 PF01047 MarR family BEST7613_3019 PF02566 OsmC-like protein BEST7613_3021 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEST7613_3022 PF08267 Cobalamin-independent synthase, N-terminal domain BEST7613_3022 PF01717 Cobalamin-independent synthase, Catalytic domain BEST7613_3023 PF00082 Subtilase family BEST7613_3024 PF01740 STAS domain BEST7613_3025 PF02361 Cobalt transport protein BEST7613_3026 PF00005 ABC transporter BEST7613_3027 PF09819 ABC-type cobalt transport system, permease component BEST7613_3028 PF07615 YKOF-related Family BEST7613_3029 PF00486 Transcriptional regulatory protein, C terminal BEST7613_3029 PF00072 Response regulator receiver domain BEST7613_3030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3030 PF00672 HAMP domain BEST7613_3030 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_3031 PF03413 Peptidase propeptide and YPEB domain BEST7613_3032 PF03413 Peptidase propeptide and YPEB domain BEST7613_3033 PF11132 Transcriptional regulator protein (SplA) BEST7613_3035 PF01769 Divalent cation transporter BEST7613_3035 PF03448 MgtE intracellular N domain BEST7613_3035 PF00571 CBS domain BEST7613_3036 PF13411 MerR HTH family regulatory protein BEST7613_3039 PF01047 MarR family BEST7613_3040 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BEST7613_3042 PF00149 Calcineurin-like phosphoesterase BEST7613_3044 PF00535 Glycosyl transferase family 2 BEST7613_3045 PF01068 ATP dependent DNA ligase domain BEST7613_3046 PF02735 Ku70/Ku80 beta-barrel domain BEST7613_3047 PF00563 EAL domain BEST7613_3047 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_3047 PF03707 Bacterial signalling protein N terminal repeat BEST7613_3048 PF09335 SNARE associated Golgi protein BEST7613_3049 PF03741 Integral membrane protein TerC family BEST7613_3050 PF04542 Sigma-70 region 2 BEST7613_3051 PF12791 Anti-sigma factor N-terminus BEST7613_3052 PF00269 Small, acid-soluble spore proteins, alpha/beta type BEST7613_3053 PF08876 Domain of unknown function (DUF1836) BEST7613_3054 PF01435 Peptidase family M48 BEST7613_3055 PF02386 Cation transport protein BEST7613_3058 PF01757 Acyltransferase family BEST7613_3059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3059 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_3059 PF00989 PAS fold BEST7613_3059 PF13188 PAS domain BEST7613_3059 PF13426 PAS domain BEST7613_3060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEST7613_3060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEST7613_3062 PF01008 Initiation factor 2 subunit family BEST7613_3063 PF01636 Phosphotransferase enzyme family BEST7613_3064 PF00795 Carbon-nitrogen hydrolase BEST7613_3065 PF00155 Aminotransferase class I and II BEST7613_3066 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BEST7613_3066 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BEST7613_3068 PF00596 Class II Aldolase and Adducin N-terminal domain BEST7613_3069 PF03079 ARD/ARD' family BEST7613_3070 PF06803 Protein of unknown function (DUF1232) BEST7613_3071 PF09388 Spo0E like sporulation regulatory protein BEST7613_3073 PF02743 Cache domain BEST7613_3073 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3073 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_3074 PF01047 MarR family BEST7613_3075 PF13677 Membrane MotB of proton-channel complex MotA/MotB BEST7613_3075 PF00691 OmpA family BEST7613_3076 PF01618 MotA/TolQ/ExbB proton channel family BEST7613_3077 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_3077 PF07724 AAA domain (Cdc48 subfamily) BEST7613_3077 PF17871 AAA lid domain BEST7613_3077 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_3079 PF06508 Queuosine biosynthesis protein QueC BEST7613_3080 PF01242 6-pyruvoyl tetrahydropterin synthase BEST7613_3081 PF04055 Radical SAM superfamily BEST7613_3082 PF14489 QueF-like protein BEST7613_3083 PF01638 HxlR-like helix-turn-helix BEST7613_3085 PF01476 LysM domain BEST7613_3086 PF01476 LysM domain BEST7613_3087 PF00704 Glycosyl hydrolases family 18 BEST7613_3089 PF11514 Protein of unknown function (DUF3219) BEST7613_3090 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BEST7613_3092 PF07486 Cell Wall Hydrolase BEST7613_3093 PF01943 Polysaccharide biosynthesis protein BEST7613_3094 PF00578 AhpC/TSA family BEST7613_3097 PF01321 Creatinase/Prolidase N-terminal domain BEST7613_3097 PF00557 Metallopeptidase family M24 BEST7613_3099 PF00356 Bacterial regulatory proteins, lacI family BEST7613_3099 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BEST7613_3100 PF03123 CAT RNA binding domain BEST7613_3100 PF00874 PRD domain BEST7613_3101 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BEST7613_3101 PF02378 Phosphotransferase system, EIIC BEST7613_3101 PF00367 phosphotransferase system, EIIB BEST7613_3102 PF00381 PTS HPr component phosphorylation site BEST7613_3103 PF02896 PEP-utilising enzyme, TIM barrel domain BEST7613_3103 PF05524 PEP-utilising enzyme, N-terminal BEST7613_3103 PF00391 PEP-utilising enzyme, mobile domain BEST7613_3104 PF11132 Transcriptional regulator protein (SplA) BEST7613_3106 PF00583 Acetyltransferase (GNAT) family BEST7613_3107 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_3107 PF00672 HAMP domain BEST7613_3107 PF02743 Cache domain BEST7613_3108 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEST7613_3108 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEST7613_3109 PF00188 Cysteine-rich secretory protein family BEST7613_3110 PF03717 Penicillin-binding Protein dimerisation domain BEST7613_3110 PF00905 Penicillin binding protein transpeptidase domain BEST7613_3111 PF08447 PAS fold BEST7613_3111 PF00989 PAS fold BEST7613_3111 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_3111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3112 PF00155 Aminotransferase class I and II BEST7613_3114 PF01584 CheW-like domain BEST7613_3114 PF00072 Response regulator receiver domain BEST7613_3115 PF14177 YkyB-like protein BEST7613_3116 PF07690 Major Facilitator Superfamily BEST7613_3117 PF03734 L,D-transpeptidase catalytic domain BEST7613_3117 PF01476 LysM domain BEST7613_3118 PF10518 TAT (twin-arginine translocation) pathway signal sequence BEST7613_3118 PF00149 Calcineurin-like phosphoesterase BEST7613_3120 PF08924 Domain of unknown function (DUF1906) BEST7613_3120 PF01471 Putative peptidoglycan binding domain BEST7613_3123 PF10388 EAL-domain associated signalling protein domain BEST7613_3123 PF00563 EAL domain BEST7613_3124 PF08796 Protein of unknown function (DUF1797) BEST7613_3125 PF04308 Ribonuclease H-like BEST7613_3126 PF14156 Antirepressor AbbA BEST7613_3128 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_3128 PF03466 LysR substrate binding domain BEST7613_3129 PF00258 Flavodoxin BEST7613_3131 PF00258 Flavodoxin BEST7613_3132 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_3132 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BEST7613_3132 PF14602 Hexapeptide repeat of succinyl-transferase BEST7613_3133 PF07687 Peptidase dimerisation domain BEST7613_3133 PF01546 Peptidase family M20/M25/M40 BEST7613_3134 PF03698 Uncharacterised protein family (UPF0180) BEST7613_3135 PF00924 Mechanosensitive ion channel BEST7613_3136 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEST7613_3136 PF00578 AhpC/TSA family BEST7613_3137 PF00578 AhpC/TSA family BEST7613_3140 PF12804 MobA-like NTP transferase domain BEST7613_3141 PF00899 ThiF family BEST7613_3142 PF00994 Probable molybdopterin binding domain BEST7613_3142 PF03454 MoeA C-terminal region (domain IV) BEST7613_3142 PF03453 MoeA N-terminal region (domain I and II) BEST7613_3143 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BEST7613_3144 PF02391 MoaE protein BEST7613_3145 PF02597 ThiS family BEST7613_3146 PF00664 ABC transporter transmembrane region BEST7613_3146 PF00005 ABC transporter BEST7613_3147 PF00664 ABC transporter transmembrane region BEST7613_3147 PF00005 ABC transporter BEST7613_3148 PF04893 Yip1 domain BEST7613_3149 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEST7613_3150 PF00005 ABC transporter BEST7613_3151 PF12704 MacB-like periplasmic core domain BEST7613_3151 PF02687 FtsX-like permease family BEST7613_3152 PF08220 DeoR-like helix-turn-helix domain BEST7613_3152 PF00455 DeoR C terminal sensor domain BEST7613_3153 PF00294 pfkB family carbohydrate kinase BEST7613_3154 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BEST7613_3154 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEST7613_3155 PF10502 Signal peptidase, peptidase S26 BEST7613_3157 PF00005 ABC transporter BEST7613_3157 PF12848 ABC transporter BEST7613_3158 PF08546 Ketopantoate reductase PanE/ApbA C terminal BEST7613_3158 PF02558 Ketopantoate reductase PanE/ApbA BEST7613_3159 PF02073 Thermophilic metalloprotease (M29) BEST7613_3160 PF17447 Uncharacterized YkpC-like BEST7613_3162 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BEST7613_3162 PF18277 AbrB C-terminal domain BEST7613_3163 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3163 PF00989 PAS fold BEST7613_3163 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_3164 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BEST7613_3165 PF02254 TrkA-N domain BEST7613_3165 PF02080 TrkA-C domain BEST7613_3166 PF13382 Adenine deaminase C-terminal domain BEST7613_3166 PF01979 Amidohydrolase family BEST7613_3167 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BEST7613_3167 PF17770 Ribonuclease J C-terminal domain BEST7613_3167 PF00753 Metallo-beta-lactamase superfamily BEST7613_3170 PF01327 Polypeptide deformylase BEST7613_3172 PF10368 Putative cell-wall binding lipoprotein BEST7613_3173 PF00676 Dehydrogenase E1 component BEST7613_3174 PF02780 Transketolase, C-terminal domain BEST7613_3174 PF02779 Transketolase, pyrimidine binding domain BEST7613_3175 PF00364 Biotin-requiring enzyme BEST7613_3175 PF02817 e3 binding domain BEST7613_3175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEST7613_3176 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_3176 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEST7613_3178 PF01276 Orn/Lys/Arg decarboxylase, major domain BEST7613_3178 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BEST7613_3179 PF05256 Uncharacterised protein family (UPF0223) BEST7613_3180 PF06335 Protein of unknown function (DUF1054) BEST7613_3182 PF00459 Inositol monophosphatase family BEST7613_3183 PF00583 Acetyltransferase (GNAT) family BEST7613_3184 PF04072 Leucine carboxyl methyltransferase BEST7613_3185 PF02868 Thermolysin metallopeptidase, alpha-helical domain BEST7613_3185 PF03413 Peptidase propeptide and YPEB domain BEST7613_3185 PF01447 Thermolysin metallopeptidase, catalytic domain BEST7613_3185 PF07504 Fungalysin/Thermolysin Propeptide Motif BEST7613_3188 PF08281 Sigma-70, region 4 BEST7613_3188 PF04542 Sigma-70 region 2 BEST7613_3189 PF13490 Putative zinc-finger BEST7613_3191 PF17259 Family of unknown function (DUF5325) BEST7613_3193 PF14036 YlaH-like protein BEST7613_3194 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BEST7613_3195 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BEST7613_3196 PF02562 PhoH-like protein BEST7613_3196 PF13638 PIN domain BEST7613_3198 PF04960 Glutaminase BEST7613_3199 PF07408 Protein of unknown function (DUF1507) BEST7613_3200 PF01098 Cell cycle protein BEST7613_3201 PF00289 Biotin carboxylase, N-terminal domain BEST7613_3201 PF02436 Conserved carboxylase domain BEST7613_3201 PF00682 HMGL-like BEST7613_3201 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_3201 PF00364 Biotin-requiring enzyme BEST7613_3201 PF02785 Biotin carboxylase C-terminal domain BEST7613_3202 PF02628 Cytochrome oxidase assembly protein BEST7613_3203 PF01040 UbiA prenyltransferase family BEST7613_3204 PF00034 Cytochrome c BEST7613_3204 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEST7613_3204 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BEST7613_3205 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEST7613_3206 PF00510 Cytochrome c oxidase subunit III BEST7613_3207 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BEST7613_3208 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BEST7613_3209 PF08868 YugN-like family BEST7613_3210 PF00571 CBS domain BEST7613_3211 PF00188 Cysteine-rich secretory protein family BEST7613_3211 PF14504 CAP-associated N-terminal BEST7613_3212 PF14071 Putative coat protein BEST7613_3213 PF14003 YlbE-like protein BEST7613_3214 PF06133 Control of competence regulator ComK, YlbF/YmcA BEST7613_3215 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BEST7613_3217 PF01467 Cytidylyltransferase-like BEST7613_3218 PF07670 Nucleoside recognition BEST7613_3220 PF01734 Patatin-like phospholipase BEST7613_3221 PF05362 Lon protease (S16) C-terminal proteolytic domain BEST7613_3221 PF13180 PDZ domain BEST7613_3222 PF05636 HIGH Nucleotidyl Transferase BEST7613_3223 PF02620 Large ribosomal RNA subunit accumulation protein YceD BEST7613_3224 PF01783 Ribosomal L32p protein family BEST7613_3226 PF00583 Acetyltransferase (GNAT) family BEST7613_3227 PF02558 Ketopantoate reductase PanE/ApbA BEST7613_3227 PF08546 Ketopantoate reductase PanE/ApbA C terminal BEST7613_3228 PF10079 Bacillithiol biosynthesis BshC BEST7613_3229 PF02381 MraZ protein, putative antitoxin-like BEST7613_3230 PF01795 MraW methylase family BEST7613_3233 PF03793 PASTA domain BEST7613_3233 PF03717 Penicillin-binding Protein dimerisation domain BEST7613_3233 PF00905 Penicillin binding protein transpeptidase domain BEST7613_3234 PF01225 Mur ligase family, catalytic domain BEST7613_3234 PF02875 Mur ligase family, glutamate ligase domain BEST7613_3234 PF08245 Mur ligase middle domain BEST7613_3235 PF00953 Glycosyl transferase family 4 BEST7613_3235 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BEST7613_3236 PF02875 Mur ligase family, glutamate ligase domain BEST7613_3236 PF08245 Mur ligase middle domain BEST7613_3237 PF01098 Cell cycle protein BEST7613_3238 PF03033 Glycosyltransferase family 28 N-terminal domain BEST7613_3238 PF04101 Glycosyltransferase family 28 C-terminal domain BEST7613_3239 PF01565 FAD binding domain BEST7613_3239 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BEST7613_3240 PF08478 POTRA domain, FtsQ-type BEST7613_3241 PF05949 Bacterial protein of unknown function (DUF881) BEST7613_3242 PF05949 Bacterial protein of unknown function (DUF881) BEST7613_3243 PF06947 Protein of unknown function (DUF1290) BEST7613_3244 PF02491 SHS2 domain inserted in FTSA BEST7613_3245 PF12327 FtsZ family, C-terminal domain BEST7613_3245 PF00091 Tubulin/FtsZ family, GTPase domain BEST7613_3246 PF05922 Peptidase inhibitor I9 BEST7613_3246 PF00082 Subtilase family BEST7613_3247 PF03419 Sporulation factor SpoIIGA BEST7613_3248 PF04542 Sigma-70 region 2 BEST7613_3248 PF04545 Sigma-70, region 4 BEST7613_3249 PF04545 Sigma-70, region 4 BEST7613_3249 PF04539 Sigma-70 region 3 BEST7613_3249 PF04542 Sigma-70 region 2 BEST7613_3250 PF00005 ABC transporter BEST7613_3251 PF07687 Peptidase dimerisation domain BEST7613_3251 PF01546 Peptidase family M20/M25/M40 BEST7613_3252 PF05239 PRC-barrel domain BEST7613_3254 PF01168 Alanine racemase, N-terminal domain BEST7613_3255 PF04472 Cell division protein SepF BEST7613_3256 PF02325 YGGT family BEST7613_3257 PF17774 Putative RNA-binding domain in YlmH BEST7613_3257 PF01479 S4 domain BEST7613_3258 PF05103 DivIVA protein BEST7613_3259 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_3259 PF08264 Anticodon-binding domain of tRNA BEST7613_3260 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEST7613_3261 PF01252 Signal peptidase (SPase) II BEST7613_3262 PF00849 RNA pseudouridylate synthase BEST7613_3262 PF01479 S4 domain BEST7613_3263 PF00156 Phosphoribosyl transferase domain BEST7613_3264 PF00860 Permease family BEST7613_3265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEST7613_3265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEST7613_3266 PF01979 Amidohydrolase family BEST7613_3267 PF00117 Glutamine amidotransferase class-I BEST7613_3267 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEST7613_3268 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEST7613_3268 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_3268 PF02142 MGS-like domain BEST7613_3269 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BEST7613_3269 PF00175 Oxidoreductase NAD-binding domain BEST7613_3270 PF01180 Dihydroorotate dehydrogenase BEST7613_3271 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BEST7613_3272 PF00156 Phosphoribosyl transferase domain BEST7613_3273 PF01507 Phosphoadenosine phosphosulfate reductase family BEST7613_3274 PF01384 Phosphate transporter family BEST7613_3275 PF01747 ATP-sulfurylase BEST7613_3275 PF14306 PUA-like domain BEST7613_3277 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_3278 PF01903 CbiX BEST7613_3281 PF00690 Cation transporter/ATPase, N-terminus BEST7613_3281 PF00689 Cation transporting ATPase, C-terminus BEST7613_3282 PF08340 Domain of unknown function (DUF1732) BEST7613_3282 PF03755 YicC-like family, N-terminal region BEST7613_3283 PF04025 Domain of unknown function (DUF370) BEST7613_3284 PF00625 Guanylate kinase BEST7613_3285 PF01192 RNA polymerase Rpb6 BEST7613_3286 PF04127 DNA / pantothenate metabolism flavoprotein BEST7613_3286 PF02441 Flavoprotein BEST7613_3287 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BEST7613_3287 PF00271 Helicase conserved C-terminal domain BEST7613_3287 PF18074 Primosomal protein N C-terminal domain BEST7613_3287 PF04851 Type III restriction enzyme, res subunit BEST7613_3287 PF17764 3′ DNA-binding domain (3′BD) BEST7613_3288 PF01327 Polypeptide deformylase BEST7613_3289 PF02911 Formyl transferase, C-terminal domain BEST7613_3289 PF00551 Formyl transferase BEST7613_3290 PF01029 NusB family BEST7613_3290 PF01189 16S rRNA methyltransferase RsmB/F BEST7613_3291 PF04055 Radical SAM superfamily BEST7613_3293 PF03793 PASTA domain BEST7613_3293 PF00069 Protein kinase domain BEST7613_3294 PF03193 RsgA GTPase BEST7613_3294 PF16745 RsgA N-terminal domain BEST7613_3295 PF00834 Ribulose-phosphate 3 epimerase family BEST7613_3296 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BEST7613_3296 PF04263 Thiamin pyrophosphokinase, catalytic domain BEST7613_3297 PF00830 Ribosomal L28 family BEST7613_3298 PF03780 Asp23 family, cell envelope-related function BEST7613_3299 PF13684 Dihydroxyacetone kinase family BEST7613_3299 PF02734 DAK2 domain BEST7613_3300 PF03315 Serine dehydratase beta chain BEST7613_3300 PF01842 ACT domain BEST7613_3301 PF03313 Serine dehydratase alpha chain BEST7613_3302 PF00270 DEAD/DEAH box helicase BEST7613_3302 PF17191 RecG wedge domain BEST7613_3302 PF00271 Helicase conserved C-terminal domain BEST7613_3303 PF03061 Thioesterase superfamily BEST7613_3304 PF02504 Fatty acid synthesis protein BEST7613_3305 PF00698 Acyl transferase domain BEST7613_3307 PF00550 Phosphopantetheine attachment site BEST7613_3308 PF14622 Ribonuclease-III-like BEST7613_3308 PF00035 Double-stranded RNA binding motif BEST7613_3309 PF02463 RecF/RecN/SMC N terminal domain BEST7613_3309 PF06470 SMC proteins Flexible Hinge Domain BEST7613_3310 PF00448 SRP54-type protein, GTPase domain BEST7613_3310 PF02881 SRP54-type protein, helical bundle domain BEST7613_3311 PF02369 Bacterial Ig-like domain (group 1) BEST7613_3312 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BEST7613_3313 PF00448 SRP54-type protein, GTPase domain BEST7613_3313 PF02881 SRP54-type protein, helical bundle domain BEST7613_3313 PF02978 Signal peptide binding domain BEST7613_3314 PF00886 Ribosomal protein S16 BEST7613_3316 PF11068 YlqD protein BEST7613_3317 PF05239 PRC-barrel domain BEST7613_3317 PF01782 RimM N-terminal domain BEST7613_3318 PF01746 tRNA (Guanine-1)-methyltransferase BEST7613_3319 PF01245 Ribosomal protein L19 BEST7613_3320 PF01926 50S ribosome-binding GTPase BEST7613_3321 PF01351 Ribonuclease HII BEST7613_3323 PF01312 FlhB HrpN YscU SpaS Family BEST7613_3324 PF00549 CoA-ligase BEST7613_3324 PF08442 ATP-grasp domain BEST7613_3325 PF02629 CoA binding domain BEST7613_3325 PF00549 CoA-ligase BEST7613_3326 PF02481 DNA recombination-mediator protein A BEST7613_3327 PF01751 Toprim domain BEST7613_3327 PF01396 Topoisomerase DNA binding C4 zinc finger BEST7613_3327 PF01131 DNA topoisomerase BEST7613_3328 PF01134 Glucose inhibited division protein A BEST7613_3329 PF00589 Phage integrase family BEST7613_3329 PF02899 Phage integrase, N-terminal SAM-like domain BEST7613_3330 PF00227 Proteasome subunit BEST7613_3331 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_3331 PF07724 AAA domain (Cdc48 subfamily) BEST7613_3331 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_3332 PF06018 CodY GAF-like domain BEST7613_3332 PF08222 CodY helix-turn-helix domain BEST7613_3333 PF00460 Flagella basal body rod protein BEST7613_3334 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEST7613_3334 PF00460 Flagella basal body rod protein BEST7613_3335 PF02049 Flagellar hook-basal body complex protein FliE BEST7613_3336 PF01514 Secretory protein of YscJ/FliF family BEST7613_3336 PF08345 Flagellar M-ring protein C-terminal BEST7613_3337 PF14841 FliG middle domain BEST7613_3337 PF14842 FliG N-terminal domain BEST7613_3337 PF01706 FliG C-terminal domain BEST7613_3338 PF02108 Flagellar assembly protein FliH BEST7613_3339 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEST7613_3339 PF18269 T3SS EscN ATPase C-terminal domain BEST7613_3339 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEST7613_3340 PF02050 Flagellar FliJ protein BEST7613_3341 PF03448 MgtE intracellular N domain BEST7613_3342 PF02120 Flagellar hook-length control protein FliK BEST7613_3343 PF03963 Flagellar hook capping protein - N-terminal region BEST7613_3344 PF00460 Flagella basal body rod protein BEST7613_3344 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEST7613_3345 PF06289 Flagellar and Swarming motility proteins BEST7613_3346 PF03748 Flagellar basal body-associated protein FliL BEST7613_3347 PF02154 Flagellar motor switch protein FliM BEST7613_3347 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BEST7613_3348 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BEST7613_3348 PF04509 CheC-like family BEST7613_3349 PF00072 Response regulator receiver domain BEST7613_3350 PF04347 Flagellar biosynthesis protein, FliO BEST7613_3351 PF00813 FliP family BEST7613_3352 PF01313 Bacterial export proteins, family 3 BEST7613_3353 PF01311 Bacterial export proteins, family 1 BEST7613_3354 PF01312 FlhB HrpN YscU SpaS Family BEST7613_3355 PF00771 FHIPEP family BEST7613_3356 PF00448 SRP54-type protein, GTPase domain BEST7613_3357 PF10609 NUBPL iron-transfer P-loop NTPase BEST7613_3358 PF01339 CheB methylesterase BEST7613_3358 PF00072 Response regulator receiver domain BEST7613_3359 PF02895 Signal transducing histidine kinase, homodimeric domain BEST7613_3359 PF01584 CheW-like domain BEST7613_3359 PF07194 P2 response regulator binding domain BEST7613_3359 PF01627 Hpt domain BEST7613_3359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3360 PF01584 CheW-like domain BEST7613_3361 PF04509 CheC-like family BEST7613_3362 PF03975 CheD chemotactic sensory transduction BEST7613_3363 PF04539 Sigma-70 region 3 BEST7613_3363 PF04545 Sigma-70, region 4 BEST7613_3363 PF04542 Sigma-70 region 2 BEST7613_3365 PF00318 Ribosomal protein S2 BEST7613_3366 PF00889 Elongation factor TS BEST7613_3367 PF00696 Amino acid kinase family BEST7613_3368 PF01765 Ribosome recycling factor BEST7613_3369 PF01255 Putative undecaprenyl diphosphate synthase BEST7613_3371 PF13288 DXP reductoisomerase C-terminal domain BEST7613_3371 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BEST7613_3371 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BEST7613_3372 PF17820 PDZ domain BEST7613_3372 PF02163 Peptidase family M50 BEST7613_3373 PF03129 Anticodon binding domain BEST7613_3373 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEST7613_3373 PF04073 Aminoacyl-tRNA editing domain BEST7613_3374 PF14480 DNA polymerase III polC-type N-terminus I BEST7613_3374 PF11490 DNA polymerase III polC-type N-terminus II BEST7613_3374 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEST7613_3374 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEST7613_3374 PF14579 Helix-hairpin-helix motif BEST7613_3374 PF02811 PHP domain BEST7613_3374 PF00929 Exonuclease BEST7613_3375 PF17384 RimP C-terminal SH3 domain BEST7613_3375 PF02576 RimP N-terminal domain BEST7613_3376 PF13184 NusA-like KH domain BEST7613_3376 PF08529 NusA N-terminal domain BEST7613_3376 PF00575 S1 RNA binding domain BEST7613_3377 PF04296 Protein of unknown function (DUF448) BEST7613_3378 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BEST7613_3379 PF04760 Translation initiation factor IF-2, N-terminal region BEST7613_3379 PF11987 Translation-initiation factor 2 BEST7613_3379 PF00009 Elongation factor Tu GTP binding domain BEST7613_3380 PF04456 Protein of unknown function (DUF503) BEST7613_3381 PF02033 Ribosome-binding factor A BEST7613_3382 PF01509 TruB family pseudouridylate synthase (N terminal domain) BEST7613_3382 PF16198 tRNA pseudouridylate synthase B C-terminal domain BEST7613_3383 PF06574 FAD synthetase BEST7613_3383 PF01687 Riboflavin kinase BEST7613_3384 PF00312 Ribosomal protein S15 BEST7613_3385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BEST7613_3385 PF01138 3' exoribonuclease family, domain 1 BEST7613_3385 PF03725 3' exoribonuclease family, domain 2 BEST7613_3385 PF00575 S1 RNA binding domain BEST7613_3385 PF00013 KH domain BEST7613_3386 PF01522 Polysaccharide deacetylase BEST7613_3387 PF05193 Peptidase M16 inactive domain BEST7613_3387 PF00675 Insulinase (Peptidase family M16) BEST7613_3388 PF05239 PRC-barrel domain BEST7613_3389 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEST7613_3389 PF16924 Dipicolinate synthase subunit A N-terminal domain BEST7613_3390 PF02441 Flavoprotein BEST7613_3391 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEST7613_3391 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEST7613_3392 PF00696 Amino acid kinase family BEST7613_3392 PF13840 ACT domain BEST7613_3393 PF00701 Dihydrodipicolinate synthetase family BEST7613_3394 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BEST7613_3394 PF00753 Metallo-beta-lactamase superfamily BEST7613_3394 PF17770 Ribonuclease J C-terminal domain BEST7613_3395 PF00574 Clp protease BEST7613_3396 PF14035 YlzJ-like protein BEST7613_3397 PF01580 FtsK/SpoIIIE family BEST7613_3397 PF09397 Ftsk gamma domain BEST7613_3397 PF17854 FtsK alpha domain BEST7613_3398 PF00392 Bacterial regulatory proteins, gntR family BEST7613_3398 PF07702 UTRA domain BEST7613_3399 PF07690 Major Facilitator Superfamily BEST7613_3400 PF05193 Peptidase M16 inactive domain BEST7613_3401 PF00675 Insulinase (Peptidase family M16) BEST7613_3401 PF05193 Peptidase M16 inactive domain BEST7613_3403 PF11588 Protein of unknown function (DUF3243) BEST7613_3404 PF11868 Protein of unknown function (DUF3388) BEST7613_3405 PF11868 Protein of unknown function (DUF3388) BEST7613_3406 PF13464 Domain of unknown function (DUF4115) BEST7613_3407 PF01066 CDP-alcohol phosphatidyltransferase BEST7613_3408 PF00994 Probable molybdopterin binding domain BEST7613_3408 PF18146 Damage-inducible protein CinA KH domain BEST7613_3408 PF02464 Competence-damaged protein BEST7613_3409 PF00154 recA bacterial DNA recombination protein BEST7613_3410 PF00144 Beta-lactamase BEST7613_3411 PF00013 KH domain BEST7613_3411 PF01966 HD domain BEST7613_3411 PF12072 Domain of unknown function (DUF3552) BEST7613_3412 PF13277 YmdB-like protein BEST7613_3413 PF04232 Stage V sporulation protein S (SpoVS) BEST7613_3414 PF00107 Zinc-binding dehydrogenase BEST7613_3414 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_3415 PF00155 Aminotransferase class I and II BEST7613_3416 PF01938 TRAM domain BEST7613_3416 PF00919 Uncharacterized protein family UPF0004 BEST7613_3416 PF04055 Radical SAM superfamily BEST7613_3417 PF06133 Control of competence regulator ComK, YlbF/YmcA BEST7613_3418 PF10628 Outer spore coat protein E (CotE) BEST7613_3419 PF01624 MutS domain I BEST7613_3419 PF05188 MutS domain II BEST7613_3419 PF00488 MutS domain V BEST7613_3419 PF05190 MutS family domain IV BEST7613_3419 PF05192 MutS domain III BEST7613_3420 PF01119 DNA mismatch repair protein, C-terminal domain BEST7613_3420 PF08676 MutL C terminal dimerisation domain BEST7613_3421 PF14184 Regulatory protein YrvL BEST7613_3423 PF13977 BetI-type transcriptional repressor, C-terminal BEST7613_3423 PF00440 Bacterial regulatory proteins, tetR family BEST7613_3424 PF00753 Metallo-beta-lactamase superfamily BEST7613_3425 PF00698 Acyl transferase domain BEST7613_3426 PF00698 Acyl transferase domain BEST7613_3427 PF03060 Nitronate monooxygenase BEST7613_3427 PF00698 Acyl transferase domain BEST7613_3428 PF00550 Phosphopantetheine attachment site BEST7613_3429 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_3429 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_3430 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal BEST7613_3430 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal BEST7613_3431 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_3432 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_3433 PF00550 Phosphopantetheine attachment site BEST7613_3433 PF08659 KR domain BEST7613_3433 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_3433 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_3433 PF16197 Ketoacyl-synthetase C-terminal extension BEST7613_3433 PF00668 Condensation domain BEST7613_3433 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3433 PF00501 AMP-binding enzyme BEST7613_3433 PF14765 Polyketide synthase dehydratase BEST7613_3434 PF16197 Ketoacyl-synthetase C-terminal extension BEST7613_3434 PF14765 Polyketide synthase dehydratase BEST7613_3434 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_3434 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_3434 PF08659 KR domain BEST7613_3434 PF00550 Phosphopantetheine attachment site BEST7613_3435 PF14765 Polyketide synthase dehydratase BEST7613_3435 PF00550 Phosphopantetheine attachment site BEST7613_3435 PF16197 Ketoacyl-synthetase C-terminal extension BEST7613_3435 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_3435 PF08242 Methyltransferase domain BEST7613_3435 PF08659 KR domain BEST7613_3435 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_3436 PF00668 Condensation domain BEST7613_3436 PF16197 Ketoacyl-synthetase C-terminal extension BEST7613_3436 PF08659 KR domain BEST7613_3436 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_3436 PF00501 AMP-binding enzyme BEST7613_3436 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3436 PF14765 Polyketide synthase dehydratase BEST7613_3436 PF00550 Phosphopantetheine attachment site BEST7613_3436 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_3437 PF08659 KR domain BEST7613_3437 PF14765 Polyketide synthase dehydratase BEST7613_3437 PF00550 Phosphopantetheine attachment site BEST7613_3437 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_3437 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_3437 PF16197 Ketoacyl-synthetase C-terminal extension BEST7613_3437 PF00668 Condensation domain BEST7613_3437 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3437 PF00501 AMP-binding enzyme BEST7613_3438 PF16197 Ketoacyl-synthetase C-terminal extension BEST7613_3438 PF00109 Beta-ketoacyl synthase, N-terminal domain BEST7613_3438 PF02801 Beta-ketoacyl synthase, C-terminal domain BEST7613_3438 PF08242 Methyltransferase domain BEST7613_3438 PF00550 Phosphopantetheine attachment site BEST7613_3438 PF14765 Polyketide synthase dehydratase BEST7613_3438 PF00975 Thioesterase domain BEST7613_3439 PF00067 Cytochrome P450 BEST7613_3442 PF00082 Subtilase family BEST7613_3443 PF05908 Poly-gamma-glutamate hydrolase BEST7613_3444 PF02566 OsmC-like protein BEST7613_3445 PF00893 Small Multidrug Resistance protein BEST7613_3446 PF00893 Small Multidrug Resistance protein BEST7613_3448 PF12788 YmaF family BEST7613_3450 PF17209 Hfq protein BEST7613_3451 PF14157 YmzC-like protein BEST7613_3453 PF07972 NrdI Flavodoxin like BEST7613_3454 PF08343 Ribonucleotide reductase N-terminal BEST7613_3454 PF00317 Ribonucleotide reductase, all-alpha domain BEST7613_3454 PF02867 Ribonucleotide reductase, barrel domain BEST7613_3455 PF00268 Ribonucleotide reductase, small chain BEST7613_3457 PF05036 Sporulation related domain BEST7613_3457 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_3458 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_3458 PF17866 AAA lid domain BEST7613_3459 PF16360 GTP-binding GTPase Middle Region BEST7613_3459 PF13167 GTP-binding GTPase N-terminal BEST7613_3459 PF01926 50S ribosome-binding GTPase BEST7613_3460 PF06838 Methionine gamma-lyase BEST7613_3461 PF13411 MerR HTH family regulatory protein BEST7613_3462 PF00120 Glutamine synthetase, catalytic domain BEST7613_3462 PF03951 Glutamine synthetase, beta-Grasp domain BEST7613_3468 PF13302 Acetyltransferase (GNAT) domain BEST7613_3469 PF13021 Domain of unknown function (DUF3885) BEST7613_3475 PF04616 Glycosyl hydrolases family 43 BEST7613_3475 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BEST7613_3476 PF00480 ROK family BEST7613_3477 PF01261 Xylose isomerase-like TIM barrel BEST7613_3478 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_3478 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEST7613_3479 PF00565 Staphylococcal nuclease homologue BEST7613_3480 PF00083 Sugar (and other) transporter BEST7613_3481 PF01168 Alanine racemase, N-terminal domain BEST7613_3481 PF00842 Alanine racemase, C-terminal domain BEST7613_3482 PF10903 Protein of unknown function (DUF2691) BEST7613_3483 PF00692 dUTPase BEST7613_3487 PF00303 Thymidylate synthase BEST7613_3489 PF15493 Domain of unknown function, YrpD BEST7613_3492 PF02416 mttA/Hcf106 family BEST7613_3494 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BEST7613_3496 PF03323 Bacillus/Clostridium GerA spore germination protein BEST7613_3497 PF03845 Spore germination protein BEST7613_3498 PF05504 Spore germination B3/ GerAC like, C-terminal BEST7613_3500 PF13761 Domain of unknown function (DUF4166) BEST7613_3501 PF14158 YndJ-like protein BEST7613_3503 PF05908 Poly-gamma-glutamate hydrolase BEST7613_3504 PF10710 Protein of unknown function (DUF2512) BEST7613_3505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_3506 PF00717 Peptidase S24-like BEST7613_3506 PF01726 LexA DNA binding domain BEST7613_3507 PF01476 LysM domain BEST7613_3508 PF00239 Resolvase, N terminal domain BEST7613_3509 PF05979 Bacterial protein of unknown function (DUF896) BEST7613_3510 PF02779 Transketolase, pyrimidine binding domain BEST7613_3510 PF00456 Transketolase, thiamine diphosphate binding domain BEST7613_3510 PF02780 Transketolase, C-terminal domain BEST7613_3511 PF10747 Sporulation inhibitor of replication protein SirA BEST7613_3512 PF03672 Uncharacterised protein family (UPF0154) BEST7613_3513 PF09388 Spo0E like sporulation regulatory protein BEST7613_3514 PF02683 Cytochrome C biogenesis protein transmembrane region BEST7613_3515 PF00072 Response regulator receiver domain BEST7613_3516 PF07301 Protein of unknown function (DUF1453) BEST7613_3517 PF11084 Protein of unknown function (DUF2621) BEST7613_3519 PF08179 Small acid-soluble spore protein P family BEST7613_3521 PF00330 Aconitase family (aconitate hydratase) BEST7613_3521 PF00694 Aconitase C-terminal domain BEST7613_3522 PF00578 AhpC/TSA family BEST7613_3523 PF13040 Fur-regulated basic protein B BEST7613_3524 PF08177 Small acid-soluble spore protein N family BEST7613_3526 PF03061 Thioesterase superfamily BEST7613_3528 PF01521 Iron-sulphur cluster biosynthesis BEST7613_3529 PF02660 Glycerol-3-phosphate acyltransferase BEST7613_3530 PF13380 CoA binding domain BEST7613_3531 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3531 PF00986 DNA gyrase B subunit, carboxyl terminus BEST7613_3531 PF00204 DNA gyrase B BEST7613_3531 PF01751 Toprim domain BEST7613_3532 PF00521 DNA gyrase/topoisomerase IV, subunit A BEST7613_3532 PF03989 DNA gyrase C-terminal domain, beta-propeller BEST7613_3535 PF01235 Sodium:alanine symporter family BEST7613_3536 PF00942 Cellulose binding domain BEST7613_3536 PF00150 Cellulase (glycosyl hydrolase family 5) BEST7613_3537 PF17452 Uncharacterized YnfE-like BEST7613_3538 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BEST7613_3539 PF03422 Carbohydrate binding module (family 6) BEST7613_3539 PF04616 Glycosyl hydrolases family 43 BEST7613_3540 PF04138 GtrA-like protein BEST7613_3541 PF00483 Nucleotidyl transferase BEST7613_3542 PF09335 SNARE associated Golgi protein BEST7613_3544 PF01039 Carboxyl transferase domain BEST7613_3545 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_3546 PF00682 HMGL-like BEST7613_3547 PF00364 Biotin-requiring enzyme BEST7613_3548 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_3548 PF00289 Biotin carboxylase, N-terminal domain BEST7613_3548 PF02785 Biotin carboxylase C-terminal domain BEST7613_3549 PF00501 AMP-binding enzyme BEST7613_3549 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEST7613_3550 PF02770 Acyl-CoA dehydrogenase, middle domain BEST7613_3550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEST7613_3551 PF17329 Family of unknown function (DUF5367) BEST7613_3552 PF02638 Glycosyl hydrolase-like 10 BEST7613_3553 PF07098 Protein of unknown function (DUF1360) BEST7613_3554 PF00501 AMP-binding enzyme BEST7613_3554 PF00975 Thioesterase domain BEST7613_3554 PF00668 Condensation domain BEST7613_3554 PF00550 Phosphopantetheine attachment site BEST7613_3554 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3555 PF00550 Phosphopantetheine attachment site BEST7613_3555 PF00501 AMP-binding enzyme BEST7613_3555 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3555 PF00668 Condensation domain BEST7613_3556 PF00501 AMP-binding enzyme BEST7613_3556 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3556 PF00550 Phosphopantetheine attachment site BEST7613_3556 PF00668 Condensation domain BEST7613_3557 PF13193 AMP-binding enzyme C-terminal domain BEST7613_3557 PF00501 AMP-binding enzyme BEST7613_3557 PF00668 Condensation domain BEST7613_3557 PF00550 Phosphopantetheine attachment site BEST7613_3558 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BEST7613_3559 PF01263 Aldose 1-epimerase BEST7613_3560 PF01554 MatE BEST7613_3561 PF16800 IseA DL-endopeptidase inhibitor BEST7613_3562 PF00589 Phage integrase family BEST7613_3563 PF12728 Helix-turn-helix domain BEST7613_3565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_3565 PF03466 LysR substrate binding domain BEST7613_3566 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_3566 PF00107 Zinc-binding dehydrogenase BEST7613_3567 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_3567 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEST7613_3568 PF00310 Glutamine amidotransferases class-II BEST7613_3568 PF04898 Glutamate synthase central domain BEST7613_3568 PF01645 Conserved region in glutamate synthase BEST7613_3568 PF01493 GXGXG motif BEST7613_3569 PF03466 LysR substrate binding domain BEST7613_3569 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_3570 PF00696 Amino acid kinase family BEST7613_3570 PF01472 PUA domain BEST7613_3571 PF03807 NADP oxidoreductase coenzyme F420-dependent BEST7613_3571 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEST7613_3572 PF02334 Replication terminator protein BEST7613_3573 PF00106 short chain dehydrogenase BEST7613_3574 PF06103 Bacterial protein of unknown function (DUF948) BEST7613_3576 PF13302 Acetyltransferase (GNAT) domain BEST7613_3577 PF07690 Major Facilitator Superfamily BEST7613_3578 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_3578 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEST7613_3579 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEST7613_3579 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEST7613_3580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEST7613_3580 PF00384 Molybdopterin oxidoreductase BEST7613_3580 PF01568 Molydopterin dinucleotide binding domain BEST7613_3582 PF17094 Uncharacterised protein family (UPF0715) BEST7613_3584 PF13217 Protein of unknown function (DUF4025) BEST7613_3585 PF05227 CHASE3 domain BEST7613_3585 PF00672 HAMP domain BEST7613_3585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_3586 PF05227 CHASE3 domain BEST7613_3586 PF00672 HAMP domain BEST7613_3586 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_3587 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BEST7613_3587 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BEST7613_3588 PF03330 Lytic transglycolase BEST7613_3589 PF06912 Protein of unknown function (DUF1275) BEST7613_3590 PF00544 Pectate lyase BEST7613_3591 PF02586 SOS response associated peptidase (SRAP) BEST7613_3593 PF00190 Cupin BEST7613_3594 PF16302 Domain of unknown function (DUF4944) BEST7613_3595 PF14268 YoaP-like BEST7613_3595 PF00583 Acetyltransferase (GNAT) family BEST7613_3598 PF04294 VanW like protein BEST7613_3599 PF11188 Protein of unknown function (DUF2975) BEST7613_3600 PF13443 Cro/C1-type HTH DNA-binding domain BEST7613_3601 PF05675 Protein of unknown function (DUF817) BEST7613_3602 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_3602 PF03466 LysR substrate binding domain BEST7613_3603 PF00892 EamA-like transporter family BEST7613_3605 PF01965 DJ-1/PfpI family BEST7613_3607 PF11518 Protein of unknown function (DUF3221) BEST7613_3610 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BEST7613_3610 PF00391 PEP-utilising enzyme, mobile domain BEST7613_3611 PF00457 Glycosyl hydrolases family 11 BEST7613_3612 PF05154 TM2 domain BEST7613_3613 PF01381 Helix-turn-helix BEST7613_3616 PF02586 SOS response associated peptidase (SRAP) BEST7613_3622 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_3624 PF11799 impB/mucB/samB family C-terminal domain BEST7613_3624 PF11798 IMS family HHH motif BEST7613_3625 PF00817 impB/mucB/samB family BEST7613_3626 PF08863 YolD-like protein BEST7613_3628 PF07693 KAP family P-loop domain BEST7613_3632 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH BEST7613_3632 PF04740 LXG domain of WXG superfamily BEST7613_3633 PF09346 SMI1 / KNR4 family (SUKH-1) BEST7613_3634 PF01593 Flavin containing amine oxidoreductase BEST7613_3635 PF12708 Pectate lyase superfamily protein BEST7613_3635 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain BEST7613_3636 PF01588 Putative tRNA binding domain BEST7613_3637 PF07883 Cupin domain BEST7613_3637 PF12833 Helix-turn-helix domain BEST7613_3638 PF00583 Acetyltransferase (GNAT) family BEST7613_3639 PF00440 Bacterial regulatory proteins, tetR family BEST7613_3639 PF13305 Tetracyclin repressor-like, C-terminal domain BEST7613_3640 PF00753 Metallo-beta-lactamase superfamily BEST7613_3641 PF06445 GyrI-like small molecule binding domain BEST7613_3642 PF13280 WYL domain BEST7613_3642 PF08279 HTH domain BEST7613_3644 PF01022 Bacterial regulatory protein, arsR family BEST7613_3646 PF04238 Protein of unknown function (DUF420) BEST7613_3647 PF18846 Bacterial archaeo-eukaryotic release factor family 5 BEST7613_3649 PF02016 LD-carboxypeptidase N-terminal domain BEST7613_3649 PF17676 LD-carboxypeptidase C-terminal domain BEST7613_3650 PF00487 Fatty acid desaturase BEST7613_3651 PF07730 Histidine kinase BEST7613_3652 PF00196 Bacterial regulatory proteins, luxR family BEST7613_3652 PF00072 Response regulator receiver domain BEST7613_3653 PF01476 LysM domain BEST7613_3653 PF06725 3D domain BEST7613_3654 PF16124 RecQ zinc-binding BEST7613_3654 PF00570 HRDC domain BEST7613_3654 PF00271 Helicase conserved C-terminal domain BEST7613_3654 PF00270 DEAD/DEAH box helicase BEST7613_3654 PF09382 RQC domain BEST7613_3655 PF02525 Flavodoxin-like fold BEST7613_3656 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEST7613_3659 PF00011 Hsp20/alpha crystallin family BEST7613_3662 PF08000 Bacterial PH domain BEST7613_3664 PF00171 Aldehyde dehydrogenase family BEST7613_3665 PF13243 Squalene-hopene cyclase C-terminal domain BEST7613_3665 PF13249 Squalene-hopene cyclase N-terminal domain BEST7613_3666 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEST7613_3666 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEST7613_3667 PF00209 Sodium:neurotransmitter symporter family BEST7613_3668 PF01758 Sodium Bile acid symporter family BEST7613_3669 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEST7613_3669 PF02817 e3 binding domain BEST7613_3669 PF00364 Biotin-requiring enzyme BEST7613_3670 PF02779 Transketolase, pyrimidine binding domain BEST7613_3670 PF16870 2-oxoglutarate dehydrogenase C-terminal BEST7613_3670 PF00676 Dehydrogenase E1 component BEST7613_3671 PF00092 von Willebrand factor type A domain BEST7613_3672 PF07728 AAA domain (dynein-related subfamily) BEST7613_3673 PF13627 Prokaryotic lipoprotein-attachment site BEST7613_3673 PF00080 Copper/zinc superoxide dismutase (SODC) BEST7613_3674 PF00877 NlpC/P60 family BEST7613_3674 PF01476 LysM domain BEST7613_3675 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BEST7613_3676 PF02457 DisA bacterial checkpoint controller nucleotide-binding BEST7613_3676 PF10372 Bacterial membrane-spanning protein N-terminus BEST7613_3677 PF01554 MatE BEST7613_3678 PF01740 STAS domain BEST7613_3679 PF02585 GlcNAc-PI de-N-acetylase BEST7613_3680 PF08830 Protein of unknown function (DUF1806) BEST7613_3682 PF00892 EamA-like transporter family BEST7613_3685 PF02447 GntP family permease BEST7613_3686 PF14552 Tautomerase enzyme BEST7613_3687 PF01638 HxlR-like helix-turn-helix BEST7613_3688 PF00881 Nitroreductase family BEST7613_3689 PF01738 Dienelactone hydrolase family BEST7613_3690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_3691 PF11755 Protein of unknown function (DUF3311) BEST7613_3692 PF00474 Sodium:solute symporter family BEST7613_3693 PF03572 Peptidase family S41 BEST7613_3693 PF17820 PDZ domain BEST7613_3693 PF01471 Putative peptidoglycan binding domain BEST7613_3694 PF08241 Methyltransferase domain BEST7613_3696 PF02557 D-alanyl-D-alanine carboxypeptidase BEST7613_3697 PF01048 Phosphorylase superfamily BEST7613_3699 PF14191 YodL-like BEST7613_3700 PF01569 PAP2 superfamily BEST7613_3701 PF14162 YozD-like protein BEST7613_3704 PF06855 YozE SAM-like fold BEST7613_3705 PF14122 YokU-like protein, putative antitoxin BEST7613_3706 PF12544 Lysine-2,3-aminomutase BEST7613_3707 PF00583 Acetyltransferase (GNAT) family BEST7613_3708 PF07687 Peptidase dimerisation domain BEST7613_3708 PF01546 Peptidase family M20/M25/M40 BEST7613_3709 PF01144 Coenzyme A transferase BEST7613_3710 PF01144 Coenzyme A transferase BEST7613_3711 PF00202 Aminotransferase class-III BEST7613_3712 PF00583 Acetyltransferase (GNAT) family BEST7613_3713 PF00535 Glycosyl transferase family 2 BEST7613_3716 PF12996 DUF based on E. rectale Gene description (DUF3880) BEST7613_3717 PF02333 Phytase BEST7613_3718 PF02719 Polysaccharide biosynthesis protein BEST7613_3719 PF01641 SelR domain BEST7613_3720 PF01625 Peptide methionine sulfoxide reductase BEST7613_3721 PF01047 MarR family BEST7613_3722 PF01554 MatE BEST7613_3723 PF17431 Uncharacterized YmpT-like BEST7613_3724 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) BEST7613_3725 PF13472 GDSL-like Lipase/Acylhydrolase family BEST7613_3726 PF02630 SCO1/SenC BEST7613_3727 PF10751 Protein of unknown function (DUF2535) BEST7613_3728 PF00585 C-terminal regulatory domain of Threonine dehydratase BEST7613_3728 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_3729 PF08461 Ribonuclease R winged-helix domain BEST7613_3729 PF00158 Sigma-54 interaction domain BEST7613_3730 PF03006 Haemolysin-III related BEST7613_3732 PF00186 Dihydrofolate reductase BEST7613_3733 PF00303 Thymidylate synthase BEST7613_3734 PF04608 Phosphatidylglycerophosphatase A BEST7613_3735 PF14005 YpjP-like protein BEST7613_3736 PF04445 Putative SAM-dependent methyltransferase BEST7613_3737 PF06491 Disulphide isomerase BEST7613_3738 PF00920 Dehydratase family BEST7613_3739 PF13769 Virulence factor BEST7613_3739 PF08712 Scaffold protein Nfu/NifU N terminal BEST7613_3740 PF01966 HD domain BEST7613_3741 PF00255 Glutathione peroxidase BEST7613_3742 PF04204 Homoserine O-succinyltransferase BEST7613_3743 PF00534 Glycosyl transferases group 1 BEST7613_3743 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BEST7613_3744 PF00313 'Cold-shock' DNA-binding domain BEST7613_3746 PF10819 Protein of unknown function (DUF2564) BEST7613_3747 PF10782 Zinc-finger BEST7613_3748 PF13456 Reverse transcriptase-like BEST7613_3749 PF02592 Putative vitamin uptake transporter BEST7613_3750 PF13456 Reverse transcriptase-like BEST7613_3752 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEST7613_3752 PF01367 5'-3' exonuclease, C-terminal SAM fold BEST7613_3754 PF10752 Protein of unknown function (DUF2533) BEST7613_3755 PF00350 Dynamin family BEST7613_3756 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BEST7613_3757 PF02797 Chalcone and stilbene synthases, C-terminal domain BEST7613_3757 PF00195 Chalcone and stilbene synthases, N-terminal domain BEST7613_3758 PF00860 Permease family BEST7613_3759 PF00156 Phosphoribosyl transferase domain BEST7613_3760 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BEST7613_3761 PF03812 2-keto-3-deoxygluconate permease BEST7613_3762 PF01081 KDPG and KHG aldolase BEST7613_3763 PF00294 pfkB family carbohydrate kinase BEST7613_3764 PF00356 Bacterial regulatory proteins, lacI family BEST7613_3765 PF04962 KduI/IolB family BEST7613_3767 PF13307 Helicase C-terminal domain BEST7613_3769 PF01170 Putative RNA methylase family UPF0020 BEST7613_3769 PF02926 THUMP domain BEST7613_3770 PF05103 DivIVA protein BEST7613_3771 PF06908 YspA SLOG family BEST7613_3772 PF13482 RNase_H superfamily BEST7613_3773 PF09369 Domain of unknown function (DUF1998) BEST7613_3773 PF00271 Helicase conserved C-terminal domain BEST7613_3773 PF00270 DEAD/DEAH box helicase BEST7613_3774 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BEST7613_3776 PF14179 YppG-like protein BEST7613_3777 PF14178 YppF-like protein BEST7613_3778 PF08807 Bacterial domain of unknown function (DUF1798) BEST7613_3779 PF17522 Family of unknown function (DUF5446) BEST7613_3780 PF10720 Protein of unknown function (DUF2515) BEST7613_3781 PF03838 Recombination protein U BEST7613_3782 PF00912 Transglycosylase BEST7613_3782 PF00905 Penicillin binding protein transpeptidase domain BEST7613_3784 PF00730 HhH-GPD superfamily base excision DNA repair protein BEST7613_3784 PF00633 Helix-hairpin-helix motif BEST7613_3784 PF10576 Iron-sulfur binding domain of endonuclease III BEST7613_3785 PF07261 Replication initiation and membrane attachment BEST7613_3786 PF00152 tRNA synthetases class II (D, K and N) BEST7613_3786 PF01336 OB-fold nucleic acid binding domain BEST7613_3787 PF00155 Aminotransferase class I and II BEST7613_3788 PF03413 Peptidase propeptide and YPEB domain BEST7613_3788 PF17881 Domain of unknown function (DUF5590) BEST7613_3789 PF14084 Protein of unknown function (DUF4264) BEST7613_3790 PF04851 Type III restriction enzyme, res subunit BEST7613_3790 PF13307 Helicase C-terminal domain BEST7613_3790 PF00929 Exonuclease BEST7613_3791 PF02261 Aspartate decarboxylase BEST7613_3792 PF02569 Pantoate-beta-alanine ligase BEST7613_3793 PF02548 Ketopantoate hydroxymethyltransferase BEST7613_3794 PF02237 Biotin protein ligase C terminal domain BEST7613_3794 PF08279 HTH domain BEST7613_3794 PF03099 Biotin/lipoate A/B protein ligase family BEST7613_3795 PF13735 tRNA nucleotidyltransferase domain 2 putative BEST7613_3795 PF12627 Probable RNA and SrmB- binding site of polymerase A BEST7613_3795 PF01743 Poly A polymerase head domain BEST7613_3796 PF00534 Glycosyl transferases group 1 BEST7613_3796 PF13439 Glycosyltransferase Family 4 BEST7613_3797 PF02585 GlcNAc-PI de-N-acetylase BEST7613_3798 PF02142 MGS-like domain BEST7613_3799 PF05173 Dihydrodipicolinate reductase, C-terminus BEST7613_3799 PF01113 Dihydrodipicolinate reductase, N-terminus BEST7613_3800 PF03819 MazG nucleotide pyrophosphohydrolase domain BEST7613_3801 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BEST7613_3801 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BEST7613_3802 PF09577 Sporulation protein YpjB (SpoYpjB) BEST7613_3803 PF07187 Protein of unknown function (DUF1405) BEST7613_3804 PF00032 Cytochrome b(C-terminal)/b6/petD BEST7613_3804 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEST7613_3805 PF00033 Cytochrome b/b6/petB BEST7613_3806 PF00355 Rieske [2Fe-2S] domain BEST7613_3807 PF10673 Protein of unknown function (DUF2487) BEST7613_3808 PF08858 IDEAL domain BEST7613_3808 PF08864 UPF0302 domain BEST7613_3810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEST7613_3811 PF01842 ACT domain BEST7613_3811 PF02153 Prephenate dehydrogenase BEST7613_3812 PF00155 Aminotransferase class I and II BEST7613_3813 PF00290 Tryptophan synthase alpha chain BEST7613_3814 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_3815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEST7613_3816 PF00218 Indole-3-glycerol phosphate synthase BEST7613_3817 PF02885 Glycosyl transferase family, helical bundle domain BEST7613_3817 PF00591 Glycosyl transferase family, a/b domain BEST7613_3818 PF00425 chorismate binding enzyme BEST7613_3818 PF04715 Anthranilate synthase component I, N terminal region BEST7613_3819 PF07736 Chorismate mutase type I BEST7613_3820 PF01761 3-dehydroquinate synthase BEST7613_3821 PF01264 Chorismate synthase BEST7613_3822 PF01739 CheR methyltransferase, SAM binding domain BEST7613_3822 PF03705 CheR methyltransferase, all-alpha domain BEST7613_3823 PF00334 Nucleoside diphosphate kinase BEST7613_3824 PF00348 Polyprenyl synthetase BEST7613_3825 PF01209 ubiE/COQ5 methyltransferase family BEST7613_3826 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BEST7613_3827 PF02081 Tryptophan RNA-binding attenuator protein BEST7613_3828 PF01227 GTP cyclohydrolase I BEST7613_3829 PF00216 Bacterial DNA-binding protein BEST7613_3830 PF09547 Stage IV sporulation protein A (spore_IV_A) BEST7613_3832 PF10966 Protein of unknown function (DUF2768) BEST7613_3833 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BEST7613_3833 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BEST7613_3834 PF01926 50S ribosome-binding GTPase BEST7613_3834 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEST7613_3836 PF14045 YIEGIA protein BEST7613_3838 PF14140 YpzI-like protein BEST7613_3839 PF01070 FMN-dependent dehydrogenase BEST7613_3840 PF00575 S1 RNA binding domain BEST7613_3841 PF02224 Cytidylate kinase BEST7613_3842 PF17313 Family of unknown function (DUF5359) BEST7613_3843 PF12945 Flagellar protein YcgR BEST7613_3843 PF07238 PilZ domain BEST7613_3844 PF03413 Peptidase propeptide and YPEB domain BEST7613_3844 PF14620 YpeB sporulation BEST7613_3845 PF14620 YpeB sporulation BEST7613_3845 PF03413 Peptidase propeptide and YPEB domain BEST7613_3846 PF07486 Cell Wall Hydrolase BEST7613_3846 PF01471 Putative peptidoglycan binding domain BEST7613_3847 PF13367 PrsW family intramembrane metalloprotease BEST7613_3849 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEST7613_3849 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEST7613_3850 PF05389 Negative regulator of genetic competence (MecA) BEST7613_3851 PF00149 Calcineurin-like phosphoesterase BEST7613_3852 PF01476 LysM domain BEST7613_3853 PF02517 CPBP intramembrane metalloprotease BEST7613_3854 PF00271 Helicase conserved C-terminal domain BEST7613_3854 PF00270 DEAD/DEAH box helicase BEST7613_3855 PF14493 Helix-turn-helix domain BEST7613_3857 PF12822 ECF transporter, substrate-specific component BEST7613_3859 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEST7613_3859 PF01842 ACT domain BEST7613_3859 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEST7613_3860 PF01487 Type I 3-dehydroquinase BEST7613_3862 PF08281 Sigma-70, region 4 BEST7613_3862 PF04542 Sigma-70 region 2 BEST7613_3863 PF18698 Histidine kinase sensor domain BEST7613_3863 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_3863 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_3863 PF00672 HAMP domain BEST7613_3863 PF00989 PAS fold BEST7613_3864 PF00486 Transcriptional regulatory protein, C terminal BEST7613_3864 PF00072 Response regulator receiver domain BEST7613_3865 PF01578 Cytochrome C assembly protein BEST7613_3866 PF05140 ResB-like family BEST7613_3867 PF00578 AhpC/TSA family BEST7613_3868 PF00849 RNA pseudouridylate synthase BEST7613_3868 PF01479 S4 domain BEST7613_3869 PF07670 Nucleoside recognition BEST7613_3870 PF07670 Nucleoside recognition BEST7613_3871 PF07943 Penicillin-binding protein 5, C-terminal domain BEST7613_3871 PF00768 D-alanyl-D-alanine carboxypeptidase BEST7613_3872 PF13047 Protein of unknown function (DUF3907) BEST7613_3873 PF04079 Segregation and condensation complex subunit ScpB BEST7613_3874 PF02616 Segregation and condensation protein ScpA BEST7613_3875 PF03745 Domain of unknown function (DUF309) BEST7613_3876 PF00583 Acetyltransferase (GNAT) family BEST7613_3877 PF00885 6,7-dimethyl-8-ribityllumazine synthase BEST7613_3878 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEST7613_3878 PF00925 GTP cyclohydrolase II BEST7613_3879 PF00677 Lumazine binding domain BEST7613_3880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEST7613_3880 PF01872 RibD C-terminal domain BEST7613_3882 PF10502 Signal peptidase, peptidase S26 BEST7613_3884 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) BEST7613_3886 PF10676 Spore germination protein gerPA/gerPF BEST7613_3887 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEST7613_3888 PF06207 Protein of unknown function (DUF1002) BEST7613_3889 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEST7613_3889 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEST7613_3890 PF03323 Bacillus/Clostridium GerA spore germination protein BEST7613_3891 PF14097 Stage V sporulation protein AE1 BEST7613_3892 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BEST7613_3893 PF07451 Stage V sporulation protein AD (SpoVAD) BEST7613_3894 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BEST7613_3895 PF13782 Stage V sporulation protein AB BEST7613_3896 PF12164 Stage V sporulation protein AA BEST7613_3897 PF04539 Sigma-70 region 3 BEST7613_3897 PF04542 Sigma-70 region 2 BEST7613_3897 PF04545 Sigma-70, region 4 BEST7613_3898 PF13581 Histidine kinase-like ATPase domain BEST7613_3899 PF01740 STAS domain BEST7613_3900 PF00768 D-alanyl-D-alanine carboxypeptidase BEST7613_3900 PF07943 Penicillin-binding protein 5, C-terminal domain BEST7613_3901 PF01048 Phosphorylase superfamily BEST7613_3902 PF01676 Metalloenzyme superfamily BEST7613_3903 PF00589 Phage integrase family BEST7613_3903 PF02899 Phage integrase, N-terminal SAM-like domain BEST7613_3904 PF14004 Protein of unknown function (DUF4227) BEST7613_3905 PF01475 Ferric uptake regulator family BEST7613_3906 PF01944 Stage II sporulation protein M BEST7613_3908 PF00390 Malic enzyme, N-terminal domain BEST7613_3908 PF03949 Malic enzyme, NAD binding domain BEST7613_3908 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEST7613_3909 PF03553 Na+/H+ antiporter family BEST7613_3910 PF10415 Fumarase C C-terminus BEST7613_3910 PF00206 Lyase BEST7613_3911 PF17763 Glutaminase/Asparaginase C-terminal domain BEST7613_3911 PF00710 Asparaginase, N-terminal BEST7613_3912 PF01381 Helix-turn-helix BEST7613_3914 PF00293 NUDIX domain BEST7613_3915 PF13072 Mother cell inhibitor of FtsZ BEST7613_3916 PF00248 Aldo/keto reductase family BEST7613_3917 PF13025 Protein of unknown function (DUF3886) BEST7613_3918 PF12146 Serine aminopeptidase, S33 BEST7613_3919 PF10827 Protein of unknown function (DUF2552) BEST7613_3920 PF01521 Iron-sulphur cluster biosynthesis BEST7613_3921 PF04229 GrpB protein BEST7613_3921 PF13673 Acetyltransferase (GNAT) domain BEST7613_3922 PF03992 Antibiotic biosynthesis monooxygenase BEST7613_3923 PF00583 Acetyltransferase (GNAT) family BEST7613_3924 PF08863 YolD-like protein BEST7613_3925 PF00817 impB/mucB/samB family BEST7613_3925 PF11799 impB/mucB/samB family C-terminal domain BEST7613_3926 PF14164 YqzH-like protein BEST7613_3927 PF07690 Major Facilitator Superfamily BEST7613_3930 PF00485 Phosphoribulokinase / Uridine kinase family BEST7613_3931 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_3932 PF00106 short chain dehydrogenase BEST7613_3933 PF00753 Metallo-beta-lactamase superfamily BEST7613_3934 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEST7613_3934 PF03807 NADP oxidoreductase coenzyme F420-dependent BEST7613_3935 PF01546 Peptidase family M20/M25/M40 BEST7613_3936 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEST7613_3937 PF12146 Serine aminopeptidase, S33 BEST7613_3938 PF12706 Beta-lactamase superfamily domain BEST7613_3939 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BEST7613_3939 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BEST7613_3940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BEST7613_3940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEST7613_3941 PF00817 impB/mucB/samB family BEST7613_3941 PF11799 impB/mucB/samB family C-terminal domain BEST7613_3941 PF11798 IMS family HHH motif BEST7613_3943 PF02096 60Kd inner membrane protein BEST7613_3944 PF09844 Uncharacterized conserved protein (COG2071) BEST7613_3945 PF01546 Peptidase family M20/M25/M40 BEST7613_3945 PF07687 Peptidase dimerisation domain BEST7613_3946 PF01039 Carboxyl transferase domain BEST7613_3948 PF03734 L,D-transpeptidase catalytic domain BEST7613_3949 PF06081 Aromatic acid exporter family member 1 BEST7613_3949 PF11728 Putative aromatic acid exporter C-terminal domain BEST7613_3950 PF00005 ABC transporter BEST7613_3951 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_3952 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_3953 PF06491 Disulphide isomerase BEST7613_3954 PF00781 Diacylglycerol kinase catalytic domain BEST7613_3955 PF07690 Major Facilitator Superfamily BEST7613_3956 PF13411 MerR HTH family regulatory protein BEST7613_3956 PF06445 GyrI-like small molecule binding domain BEST7613_3957 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEST7613_3957 PF02817 e3 binding domain BEST7613_3957 PF00364 Biotin-requiring enzyme BEST7613_3958 PF02780 Transketolase, C-terminal domain BEST7613_3958 PF02779 Transketolase, pyrimidine binding domain BEST7613_3959 PF00676 Dehydrogenase E1 component BEST7613_3960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEST7613_3960 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_3961 PF00871 Acetokinase family BEST7613_3962 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEST7613_3962 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEST7613_3963 PF01515 Phosphate acetyl/butaryl transferase BEST7613_3964 PF02954 Bacterial regulatory protein, Fis family BEST7613_3964 PF00989 PAS fold BEST7613_3964 PF00158 Sigma-54 interaction domain BEST7613_3965 PF11118 Protein of unknown function (DUF2627) BEST7613_3967 PF03972 MmgE/PrpD family BEST7613_3968 PF00285 Citrate synthase, C-terminal domain BEST7613_3969 PF02770 Acyl-CoA dehydrogenase, middle domain BEST7613_3969 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEST7613_3969 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEST7613_3970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEST7613_3970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEST7613_3971 PF00108 Thiolase, N-terminal domain BEST7613_3971 PF02803 Thiolase, C-terminal domain BEST7613_3972 PF03009 Glycerophosphoryl diester phosphodiesterase family BEST7613_3973 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_3975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEST7613_3976 PF00072 Response regulator receiver domain BEST7613_3976 PF08769 Sporulation initiation factor Spo0A C terminal BEST7613_3977 PF17820 PDZ domain BEST7613_3977 PF05580 SpoIVB peptidase S55 BEST7613_3978 PF13476 AAA domain BEST7613_3979 PF01316 Arginine repressor, DNA binding domain BEST7613_3979 PF02863 Arginine repressor, C-terminal domain BEST7613_3980 PF01479 S4 domain BEST7613_3980 PF01728 FtsJ-like methyltransferase BEST7613_3981 PF02780 Transketolase, C-terminal domain BEST7613_3981 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BEST7613_3981 PF02779 Transketolase, pyrimidine binding domain BEST7613_3982 PF00348 Polyprenyl synthetase BEST7613_3983 PF02609 Exonuclease VII small subunit BEST7613_3984 PF13742 OB-fold nucleic acid binding domain BEST7613_3984 PF02601 Exonuclease VII, large subunit BEST7613_3985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEST7613_3985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEST7613_3986 PF01029 NusB family BEST7613_3987 PF03780 Asp23 family, cell envelope-related function BEST7613_3988 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_3988 PF00289 Biotin carboxylase, N-terminal domain BEST7613_3988 PF02785 Biotin carboxylase C-terminal domain BEST7613_3989 PF00364 Biotin-requiring enzyme BEST7613_3990 PF12685 SpoIIIAH-like protein BEST7613_3992 PF09581 Stage III sporulation protein AF (Spore_III_AF) BEST7613_3993 PF09546 Stage III sporulation protein AE (spore_III_AE) BEST7613_3994 PF06686 Stage III sporulation protein AC/AD protein family BEST7613_3995 PF06686 Stage III sporulation protein AC/AD protein family BEST7613_3996 PF09548 Stage III sporulation protein AB (spore_III_AB) BEST7613_3998 PF10942 Protein of unknown function (DUF2619) BEST7613_3999 PF09285 Elongation factor P, C-terminal BEST7613_3999 PF08207 Elongation factor P (EF-P) KOW-like domain BEST7613_3999 PF01132 Elongation factor P (EF-P) OB domain BEST7613_4000 PF01321 Creatinase/Prolidase N-terminal domain BEST7613_4000 PF00557 Metallopeptidase family M24 BEST7613_4001 PF01220 Dehydroquinase class II BEST7613_4002 PF11085 Conserved membrane protein YqhR BEST7613_4003 PF07136 Protein of unknown function (DUF1385) BEST7613_4005 PF01734 Patatin-like phospholipase BEST7613_4006 PF01325 Iron dependent repressor, N-terminal DNA binding domain BEST7613_4006 PF02742 Iron dependent repressor, metal binding and dimerisation domain BEST7613_4007 PF03099 Biotin/lipoate A/B protein ligase family BEST7613_4008 PF00581 Rhodanese-like domain BEST7613_4009 PF02347 Glycine cleavage system P-protein BEST7613_4010 PF02347 Glycine cleavage system P-protein BEST7613_4011 PF01571 Aminomethyltransferase folate-binding domain BEST7613_4011 PF08669 Glycine cleavage T-protein C-terminal barrel domain BEST7613_4012 PF00271 Helicase conserved C-terminal domain BEST7613_4012 PF00176 SNF2 family N-terminal domain BEST7613_4013 PF11079 Bacterial protein YqhG of unknown function BEST7613_4014 PF08671 Anti-repressor SinI BEST7613_4015 PF01381 Helix-turn-helix BEST7613_4015 PF08671 Anti-repressor SinI BEST7613_4016 PF12389 Camelysin metallo-endopeptidase BEST7613_4020 PF13028 Protein of unknown function (DUF3889) BEST7613_4021 PF14038 YqzE-like protein BEST7613_4022 PF14173 ComG operon protein 7 BEST7613_4023 PF15980 Putative Competence protein ComGF BEST7613_4025 PF07963 Prokaryotic N-terminal methylation motif BEST7613_4026 PF07963 Prokaryotic N-terminal methylation motif BEST7613_4027 PF00482 Type II secretion system (T2SS), protein F BEST7613_4028 PF00437 Type II/IV secretion system protein BEST7613_4029 PF01544 CorA-like Mg2+ transporter protein BEST7613_4030 PF01595 Cyclin M transmembrane N-terminal domain BEST7613_4030 PF03471 Transporter associated domain BEST7613_4030 PF00571 CBS domain BEST7613_4031 PF01740 STAS domain BEST7613_4031 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BEST7613_4032 PF03960 ArsC family BEST7613_4033 PF11117 Protein of unknown function (DUF2626) BEST7613_4034 PF00753 Metallo-beta-lactamase superfamily BEST7613_4035 PF10958 Protein of unknown function (DUF2759) BEST7613_4036 PF01910 Thiamine-binding protein BEST7613_4038 PF00246 Zinc carboxypeptidase BEST7613_4039 PF00884 Sulfatase BEST7613_4040 PF00480 ROK family BEST7613_4041 PF06014 Bacterial protein of unknown function (DUF910) BEST7613_4042 PF01694 Rhomboid family BEST7613_4044 PF01812 5-formyltetrahydrofolate cyclo-ligase family BEST7613_4045 PF00471 Ribosomal protein L33 BEST7613_4046 PF13439 Glycosyltransferase Family 4 BEST7613_4046 PF00534 Glycosyl transferases group 1 BEST7613_4050 PF00005 ABC transporter BEST7613_4051 PF00005 ABC transporter BEST7613_4052 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4053 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4054 PF12849 PBP superfamily domain BEST7613_4056 PF07690 Major Facilitator Superfamily BEST7613_4057 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEST7613_4057 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEST7613_4058 PF04306 Protein of unknown function (DUF456) BEST7613_4059 PF06691 Protein of unknown function (DUF1189) BEST7613_4062 PF04551 GcpE protein BEST7613_4065 PF01475 Ferric uptake regulator family BEST7613_4066 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BEST7613_4066 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BEST7613_4067 PF11116 Protein of unknown function (DUF2624) BEST7613_4068 PF01261 Xylose isomerase-like TIM barrel BEST7613_4069 PF00271 Helicase conserved C-terminal domain BEST7613_4069 PF00270 DEAD/DEAH box helicase BEST7613_4071 PF02401 LytB protein BEST7613_4072 PF01784 NIF3 (NGG1p interacting factor 3) BEST7613_4073 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BEST7613_4074 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEST7613_4075 PF03979 Sigma-70 factor, region 1.1 BEST7613_4075 PF00140 Sigma-70 factor, region 1.2 BEST7613_4075 PF04539 Sigma-70 region 3 BEST7613_4075 PF04542 Sigma-70 region 2 BEST7613_4075 PF04545 Sigma-70, region 4 BEST7613_4076 PF10410 DnaB-helicase binding domain of primase BEST7613_4076 PF08275 DNA primase catalytic core, N-terminal domain BEST7613_4076 PF01807 CHC2 zinc finger BEST7613_4077 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BEST7613_4078 PF03618 Kinase/pyrophosphorylase BEST7613_4079 PF00571 CBS domain BEST7613_4079 PF08279 HTH domain BEST7613_4080 PF02092 Glycyl-tRNA synthetase beta subunit BEST7613_4081 PF02091 Glycyl-tRNA synthetase alpha subunit BEST7613_4082 PF02565 Recombination protein O C terminal BEST7613_4082 PF11967 Recombination protein O N terminal BEST7613_4083 PF14006 YqzL-like protein BEST7613_4084 PF01926 50S ribosome-binding GTPase BEST7613_4084 PF07650 KH domain BEST7613_4085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEST7613_4086 PF01219 Prokaryotic diacylglycerol kinase BEST7613_4087 PF02130 Uncharacterized protein family UPF0054 BEST7613_4088 PF07698 7TM receptor with intracellular HD hydrolase BEST7613_4088 PF07697 7TM-HD extracellular BEST7613_4088 PF01966 HD domain BEST7613_4089 PF02562 PhoH-like protein BEST7613_4090 PF06898 Putative stage IV sporulation protein YqfD BEST7613_4091 PF07873 YabP family BEST7613_4093 PF12127 SigmaW regulon antibacterial BEST7613_4094 PF01957 NfeD-like C-terminal, partner-binding BEST7613_4094 PF01972 Serine dehydrogenase proteinase BEST7613_4095 PF09424 Yqey-like protein BEST7613_4096 PF01165 Ribosomal protein S21 BEST7613_4097 PF02690 Na+/Pi-cotransporter BEST7613_4098 PF04055 Radical SAM superfamily BEST7613_4098 PF01938 TRAM domain BEST7613_4098 PF00919 Uncharacterized protein family UPF0004 BEST7613_4099 PF04452 RNA methyltransferase BEST7613_4101 PF01556 DnaJ C terminal domain BEST7613_4101 PF00684 DnaJ central domain BEST7613_4101 PF00226 DnaJ domain BEST7613_4102 PF00012 Hsp70 protein BEST7613_4103 PF01025 GrpE BEST7613_4104 PF01628 HrcA protein C terminal domain BEST7613_4105 PF06969 HemN C-terminal domain BEST7613_4105 PF04055 Radical SAM superfamily BEST7613_4106 PF03144 Elongation factor Tu domain 2 BEST7613_4106 PF00009 Elongation factor Tu GTP binding domain BEST7613_4106 PF00679 Elongation factor G C-terminus BEST7613_4106 PF06421 GTP-binding protein LepA C-terminus BEST7613_4107 PF12438 Protein of unknown function (DUF3679) BEST7613_4108 PF07454 Stage II sporulation protein P (SpoIIP) BEST7613_4109 PF03418 Germination protease BEST7613_4111 PF01649 Ribosomal protein S20 BEST7613_4112 PF06144 DNA polymerase III, delta subunit BEST7613_4113 PF14141 YqzM-like protein BEST7613_4114 PF00753 Metallo-beta-lactamase superfamily BEST7613_4114 PF13567 Domain of unknown function (DUF4131) BEST7613_4114 PF03772 Competence protein BEST7613_4115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEST7613_4116 PF10531 SLBB domain BEST7613_4117 PF03807 NADP oxidoreductase coenzyme F420-dependent BEST7613_4117 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEST7613_4118 PF13649 Methyltransferase domain BEST7613_4120 PF01966 HD domain BEST7613_4121 PF01467 Cytidylyltransferase-like BEST7613_4122 PF01985 CRS1 / YhbY (CRM) domain BEST7613_4123 PF08501 Shikimate dehydrogenase substrate binding domain BEST7613_4123 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BEST7613_4123 PF01488 Shikimate / quinate 5-dehydrogenase BEST7613_4124 PF01926 50S ribosome-binding GTPase BEST7613_4126 PF00657 GDSL-like Lipase/Acylhydrolase BEST7613_4127 PF01471 Putative peptidoglycan binding domain BEST7613_4127 PF01510 N-acetylmuramoyl-L-alanine amidase BEST7613_4128 PF09335 SNARE associated Golgi protein BEST7613_4129 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BEST7613_4129 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEST7613_4131 PF14040 Deoxyribonuclease NucA/NucB BEST7613_4132 PF04542 Sigma-70 region 2 BEST7613_4132 PF04545 Sigma-70, region 4 BEST7613_4134 PF06146 Phosphate-starvation-inducible E BEST7613_4135 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_4136 PF00072 Response regulator receiver domain BEST7613_4136 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4137 PF04235 Protein of unknown function (DUF418) BEST7613_4138 PF00583 Acetyltransferase (GNAT) family BEST7613_4139 PF02525 Flavodoxin-like fold BEST7613_4140 PF13787 Protein of unknown function with HXXEE motif BEST7613_4141 PF01925 Sulfite exporter TauE/SafE BEST7613_4142 PF01206 Sulfurtransferase TusA BEST7613_4143 PF00753 Metallo-beta-lactamase superfamily BEST7613_4143 PF00581 Rhodanese-like domain BEST7613_4144 PF00581 Rhodanese-like domain BEST7613_4144 PF01206 Sulfurtransferase TusA BEST7613_4145 PF13686 DsrE/DsrF/DrsH-like family BEST7613_4146 PF02583 Metal-sensitive transcriptional repressor BEST7613_4149 PF07883 Cupin domain BEST7613_4151 PF13411 MerR HTH family regulatory protein BEST7613_4151 PF06445 GyrI-like small molecule binding domain BEST7613_4152 PF07690 Major Facilitator Superfamily BEST7613_4153 PF00583 Acetyltransferase (GNAT) family BEST7613_4154 PF03471 Transporter associated domain BEST7613_4154 PF01595 Cyclin M transmembrane N-terminal domain BEST7613_4154 PF00571 CBS domain BEST7613_4155 PF14142 YrzO-like protein BEST7613_4156 PF00892 EamA-like transporter family BEST7613_4157 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_4157 PF03466 LysR substrate binding domain BEST7613_4159 PF16916 Dimerisation domain of Zinc Transporter BEST7613_4159 PF01545 Cation efflux family BEST7613_4160 PF14552 Tautomerase enzyme BEST7613_4161 PF03466 LysR substrate binding domain BEST7613_4161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_4163 PF05525 Branched-chain amino acid transport protein BEST7613_4164 PF05437 Branched-chain amino acid transport protein (AzlD) BEST7613_4165 PF03591 AzlC protein BEST7613_4166 PF01037 Lrp/AsnC ligand binding domain BEST7613_4167 PF01337 Barstar (barnase inhibitor) BEST7613_4168 PF00067 Cytochrome P450 BEST7613_4171 PF00857 Isochorismatase family BEST7613_4172 PF10823 Protein of unknown function (DUF2568) BEST7613_4173 PF05163 DinB family BEST7613_4174 PF04439 Streptomycin adenylyltransferase BEST7613_4175 PF03060 Nitronate monooxygenase BEST7613_4178 PF01177 Asp/Glu/Hydantoin racemase BEST7613_4179 PF15493 Domain of unknown function, YrpD BEST7613_4181 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BEST7613_4182 PF04542 Sigma-70 region 2 BEST7613_4182 PF08281 Sigma-70, region 4 BEST7613_4183 PF00248 Aldo/keto reductase family BEST7613_4184 PF03600 Citrate transporter BEST7613_4185 PF03466 LysR substrate binding domain BEST7613_4185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_4186 PF04303 PrpF protein BEST7613_4188 PF01374 Glycosyl hydrolase family 46 BEST7613_4190 PF00561 alpha/beta hydrolase fold BEST7613_4193 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_4195 PF07875 Coat F domain BEST7613_4196 PF13823 Alcohol dehydrogenase GroES-associated BEST7613_4196 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_4196 PF00107 Zinc-binding dehydrogenase BEST7613_4198 PF07875 Coat F domain BEST7613_4199 PF13411 MerR HTH family regulatory protein BEST7613_4201 PF00107 Zinc-binding dehydrogenase BEST7613_4201 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_4202 PF01965 DJ-1/PfpI family BEST7613_4203 PF00251 Glycosyl hydrolases family 32 N-terminal domain BEST7613_4203 PF08244 Glycosyl hydrolases family 32 C terminal BEST7613_4204 PF03613 PTS system mannose/fructose/sorbose family IID component BEST7613_4205 PF03609 PTS system sorbose-specific iic component BEST7613_4206 PF03830 PTS system sorbose subfamily IIB component BEST7613_4207 PF03610 PTS system fructose IIA component BEST7613_4208 PF03610 PTS system fructose IIA component BEST7613_4208 PF00874 PRD domain BEST7613_4208 PF00158 Sigma-54 interaction domain BEST7613_4209 PF00324 Amino acid permease BEST7613_4210 PF01810 LysE type translocator BEST7613_4211 PF01978 Sugar-specific transcriptional regulator TrmB BEST7613_4211 PF11495 Archaeal transcriptional regulator TrmB BEST7613_4212 PF04542 Sigma-70 region 2 BEST7613_4212 PF08281 Sigma-70, region 4 BEST7613_4213 PF11738 Protein of unknown function (DUF3298) BEST7613_4213 PF13739 Deacetylase PdaC BEST7613_4214 PF01757 Acyltransferase family BEST7613_4215 PF14145 YrhK-like protein BEST7613_4216 PF00067 Cytochrome P450 BEST7613_4216 PF00175 Oxidoreductase NAD-binding domain BEST7613_4216 PF00258 Flavodoxin BEST7613_4216 PF00667 FAD binding domain BEST7613_4217 PF16295 Tetracyclin repressor-like, C-terminal domain BEST7613_4217 PF00440 Bacterial regulatory proteins, tetR family BEST7613_4218 PF08241 Methyltransferase domain BEST7613_4219 PF09501 Probable sporulation protein (Bac_small_yrzI) BEST7613_4220 PF01226 Formate/nitrite transporter BEST7613_4221 PF10057 Uncharacterized conserved protein (DUF2294) BEST7613_4222 PF00037 4Fe-4S binding domain BEST7613_4222 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEST7613_4222 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEST7613_4222 PF01568 Molydopterin dinucleotide binding domain BEST7613_4222 PF00384 Molybdopterin oxidoreductase BEST7613_4223 PF07849 Protein of unknown function (DUF1641) BEST7613_4224 PF14143 YrhC-like protein BEST7613_4225 PF01053 Cys/Met metabolism PLP-dependent enzyme BEST7613_4226 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_4227 PF01048 Phosphorylase superfamily BEST7613_4228 PF13649 Methyltransferase domain BEST7613_4229 PF10750 Protein of unknown function (DUF2536) BEST7613_4230 PF07423 Domain of unknown function (DUF1510) BEST7613_4231 PF00905 Penicillin binding protein transpeptidase domain BEST7613_4231 PF03717 Penicillin-binding Protein dimerisation domain BEST7613_4232 PF03449 Transcription elongation factor, N-terminal BEST7613_4232 PF01272 Transcription elongation factor, GreA/GreB, C-term BEST7613_4233 PF00485 Phosphoribulokinase / Uridine kinase family BEST7613_4237 PF02618 YceG-like family BEST7613_4238 PF06949 Protein of unknown function (DUF1292) BEST7613_4239 PF03652 Holliday junction resolvase BEST7613_4240 PF06135 IreB regulatory phosphoprotein BEST7613_4241 PF02272 DHHA1 domain BEST7613_4241 PF01411 tRNA synthetases class II (A) BEST7613_4241 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEST7613_4242 PF01594 AI-2E family transporter BEST7613_4243 PF00005 ABC transporter BEST7613_4244 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_4245 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4246 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4247 PF13056 Protein of unknown function (DUF3918) BEST7613_4249 PF05239 PRC-barrel domain BEST7613_4250 PF13538 UvrD-like helicase C-terminal domain BEST7613_4250 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BEST7613_4250 PF14490 Helix-hairpin-helix containing domain BEST7613_4251 PF13181 Tetratricopeptide repeat BEST7613_4251 PF07719 Tetratricopeptide repeat BEST7613_4253 PF00266 Aminotransferase class-V BEST7613_4254 PF02082 Transcriptional regulator BEST7613_4255 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEST7613_4255 PF16193 AAA C-terminal domain BEST7613_4255 PF12002 MgsA AAA+ ATPase C terminal BEST7613_4256 PF00899 ThiF family BEST7613_4257 PF01336 OB-fold nucleic acid binding domain BEST7613_4257 PF00152 tRNA synthetases class II (D, K and N) BEST7613_4257 PF02938 GAD domain BEST7613_4258 PF13393 Histidyl-tRNA synthetase BEST7613_4258 PF03129 Anticodon binding domain BEST7613_4259 PF17449 Uncharacterized YrzK-like BEST7613_4260 PF08239 Bacterial SH3 domain BEST7613_4260 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_4261 PF02580 D-Tyr-tRNA(Tyr) deacylase BEST7613_4262 PF13291 ACT domain BEST7613_4262 PF04607 Region found in RelA / SpoT proteins BEST7613_4262 PF02824 TGS domain BEST7613_4263 PF00156 Phosphoribosyl transferase domain BEST7613_4264 PF17768 RecJ OB domain BEST7613_4264 PF02272 DHHA1 domain BEST7613_4264 PF01368 DHH family BEST7613_4264 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BEST7613_4265 PF06305 Lipopolysaccharide assembly protein A domain BEST7613_4266 PF02080 TrkA-C domain BEST7613_4267 PF02355 Protein export membrane protein BEST7613_4267 PF07549 SecD/SecF GG Motif BEST7613_4268 PF13797 Post-transcriptional regulator BEST7613_4269 PF01943 Polysaccharide biosynthesis protein BEST7613_4269 PF14667 Polysaccharide biosynthesis C-terminal domain BEST7613_4270 PF04239 Protein of unknown function (DUF421) BEST7613_4271 PF12670 Protein of unknown function (DUF3792) BEST7613_4272 PF02699 Preprotein translocase subunit BEST7613_4273 PF01702 Queuine tRNA-ribosyltransferase BEST7613_4274 PF02547 Queuosine biosynthesis protein BEST7613_4275 PF11146 Protein of unknown function (DUF2905) BEST7613_4276 PF05491 RuvB C-terminal winged helix domain BEST7613_4276 PF17864 RuvB AAA lid domain BEST7613_4276 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEST7613_4277 PF07499 RuvA, C-terminal domain BEST7613_4277 PF01330 RuvA N terminal domain BEST7613_4278 PF08955 BofC C-terminal domain BEST7613_4278 PF08977 Bypass of Forespore C, N terminal BEST7613_4279 PF07690 Major Facilitator Superfamily BEST7613_4280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_4280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_4285 PF01235 Sodium:alanine symporter family BEST7613_4286 PF01709 Transcriptional regulator BEST7613_4287 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BEST7613_4288 PF01476 LysM domain BEST7613_4289 PF02445 Quinolinate synthetase A protein BEST7613_4290 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BEST7613_4290 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BEST7613_4291 PF00890 FAD binding domain BEST7613_4291 PF02910 Fumarate reductase flavoprotein C-term BEST7613_4292 PF00266 Aminotransferase class-V BEST7613_4293 PF08279 HTH domain BEST7613_4293 PF02829 3H domain BEST7613_4294 PF01842 ACT domain BEST7613_4294 PF00800 Prephenate dehydratase BEST7613_4295 PF01842 ACT domain BEST7613_4296 PF09269 Domain of unknown function (DUF1967) BEST7613_4296 PF01926 50S ribosome-binding GTPase BEST7613_4296 PF01018 GTP1/OBG BEST7613_4297 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BEST7613_4297 PF14682 Sporulation initiation phospho-transferase B, C-terminal BEST7613_4298 PF01016 Ribosomal L27 protein BEST7613_4299 PF04327 Cysteine protease Prp BEST7613_4300 PF00829 Ribosomal prokaryotic L21 protein BEST7613_4301 PF02163 Peptidase family M50 BEST7613_4302 PF01551 Peptidase family M23 BEST7613_4303 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEST7613_4304 PF03775 Septum formation inhibitor MinC, C-terminal domain BEST7613_4305 PF04093 rod shape-determining protein MreD BEST7613_4306 PF04085 rod shape-determining protein MreC BEST7613_4308 PF04002 RadC-like JAB domain BEST7613_4308 PF00633 Helix-hairpin-helix motif BEST7613_4309 PF02545 Maf-like protein BEST7613_4310 PF05036 Sporulation related domain BEST7613_4311 PF06750 Bacterial Peptidase A24 N-terminal domain BEST7613_4311 PF01478 Type IV leader peptidase family BEST7613_4312 PF02875 Mur ligase family, glutamate ligase domain BEST7613_4312 PF08245 Mur ligase middle domain BEST7613_4313 PF10458 Valyl tRNA synthetase tRNA binding arm BEST7613_4313 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_4313 PF08264 Anticodon-binding domain of tRNA BEST7613_4316 PF01476 LysM domain BEST7613_4317 PF00202 Aminotransferase class-III BEST7613_4318 PF00490 Delta-aminolevulinic acid dehydratase BEST7613_4319 PF02602 Uroporphyrinogen-III synthase HemD BEST7613_4320 PF03900 Porphobilinogen deaminase, C-terminal domain BEST7613_4320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BEST7613_4321 PF01578 Cytochrome C assembly protein BEST7613_4322 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BEST7613_4322 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BEST7613_4322 PF01488 Shikimate / quinate 5-dehydrogenase BEST7613_4324 PF01926 50S ribosome-binding GTPase BEST7613_4325 PF02190 ATP-dependent protease La (LON) substrate-binding domain BEST7613_4325 PF05362 Lon protease (S16) C-terminal proteolytic domain BEST7613_4325 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_4326 PF05362 Lon protease (S16) C-terminal proteolytic domain BEST7613_4326 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_4327 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_4327 PF07724 AAA domain (Cdc48 subfamily) BEST7613_4327 PF06689 ClpX C4-type zinc finger BEST7613_4328 PF05698 Bacterial trigger factor protein (TF) C-terminus BEST7613_4328 PF05697 Bacterial trigger factor protein (TF) BEST7613_4328 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEST7613_4330 PF00694 Aconitase C-terminal domain BEST7613_4331 PF00330 Aconitase family (aconitate hydratase) BEST7613_4333 PF12704 MacB-like periplasmic core domain BEST7613_4333 PF02687 FtsX-like permease family BEST7613_4333 PF00005 ABC transporter BEST7613_4334 PF00154 recA bacterial DNA recombination protein BEST7613_4335 PF00154 recA bacterial DNA recombination protein BEST7613_4336 PF00027 Cyclic nucleotide-binding domain BEST7613_4336 PF07885 Ion channel BEST7613_4340 PF00696 Amino acid kinase family BEST7613_4341 PF00268 Ribonucleotide reductase, small chain BEST7613_4342 PF01061 ABC-2 type transporter BEST7613_4343 PF00005 ABC transporter BEST7613_4343 PF14524 Wzt C-terminal domain BEST7613_4344 PF01370 NAD dependent epimerase/dehydratase family BEST7613_4349 PF02222 ATP-grasp domain BEST7613_4349 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BEST7613_4352 PF00764 Arginosuccinate synthase BEST7613_4353 PF00107 Zinc-binding dehydrogenase BEST7613_4353 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_4357 PF04012 PspA/IM30 family BEST7613_4360 PF00355 Rieske [2Fe-2S] domain BEST7613_4364 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BEST7613_4365 PF00124 Photosynthetic reaction centre protein BEST7613_4366 PF01975 Survival protein SurE BEST7613_4368 PF00472 RF-1 domain BEST7613_4368 PF03462 PCRF domain BEST7613_4369 PF03702 Anhydro-N-acetylmuramic acid kinase BEST7613_4372 PF00483 Nucleotidyl transferase BEST7613_4374 PF00183 Hsp90 protein BEST7613_4375 PF13546 DDE superfamily endonuclease BEST7613_4376 PF13546 DDE superfamily endonuclease BEST7613_4378 PF13546 DDE superfamily endonuclease BEST7613_4380 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_4381 PF01509 TruB family pseudouridylate synthase (N terminal domain) BEST7613_4384 PF00873 AcrB/AcrD/AcrF family BEST7613_4387 PF09363 XFP C-terminal domain BEST7613_4387 PF09364 XFP N-terminal domain BEST7613_4387 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BEST7613_4388 PF00920 Dehydratase family BEST7613_4389 PF08459 UvrC Helix-hairpin-helix N-terminal BEST7613_4389 PF12826 Helix-hairpin-helix motif BEST7613_4389 PF02151 UvrB/uvrC motif BEST7613_4389 PF01541 GIY-YIG catalytic domain BEST7613_4391 PF08148 DSHCT (NUC185) domain BEST7613_4391 PF00271 Helicase conserved C-terminal domain BEST7613_4391 PF00270 DEAD/DEAH box helicase BEST7613_4399 PF00027 Cyclic nucleotide-binding domain BEST7613_4399 PF13545 Crp-like helix-turn-helix domain BEST7613_4400 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEST7613_4401 PF13673 Acetyltransferase (GNAT) domain BEST7613_4410 PF00072 Response regulator receiver domain BEST7613_4410 PF00196 Bacterial regulatory proteins, luxR family BEST7613_4412 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEST7613_4413 PF01678 Diaminopimelate epimerase BEST7613_4417 PF02541 Ppx/GppA phosphatase family BEST7613_4418 PF03652 Holliday junction resolvase BEST7613_4422 PF00360 Phytochrome region BEST7613_4422 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4422 PF00563 EAL domain BEST7613_4422 PF01590 GAF domain BEST7613_4423 PF03033 Glycosyltransferase family 28 N-terminal domain BEST7613_4423 PF04101 Glycosyltransferase family 28 C-terminal domain BEST7613_4424 PF00796 Photosystem I reaction centre subunit VIII BEST7613_4425 PF02605 Photosystem I reaction centre subunit XI BEST7613_4427 PF04966 Carbohydrate-selective porin, OprB family BEST7613_4428 PF07687 Peptidase dimerisation domain BEST7613_4428 PF01546 Peptidase family M20/M25/M40 BEST7613_4430 PF00664 ABC transporter transmembrane region BEST7613_4430 PF03412 Peptidase C39 family BEST7613_4430 PF00005 ABC transporter BEST7613_4433 PF02794 RTX toxin acyltransferase family BEST7613_4437 PF06745 KaiC BEST7613_4438 PF07689 KaiB domain BEST7613_4439 PF07688 KaiA C-terminal domain BEST7613_4440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEST7613_4440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEST7613_4440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEST7613_4440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEST7613_4443 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BEST7613_4448 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BEST7613_4451 PF03600 Citrate transporter BEST7613_4453 PF03952 Enolase, N-terminal domain BEST7613_4453 PF00113 Enolase, C-terminal TIM barrel domain BEST7613_4454 PF00515 Tetratricopeptide repeat BEST7613_4456 PF00148 Nitrogenase component 1 type Oxidoreductase BEST7613_4458 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family BEST7613_4460 PF09210 Domain of unknown function (DUF1957) BEST7613_4460 PF03065 Glycosyl hydrolase family 57 BEST7613_4462 PF00005 ABC transporter BEST7613_4462 PF17912 MalK OB fold domain BEST7613_4462 PF03459 TOBE domain BEST7613_4463 PF09506 Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase) BEST7613_4464 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4464 PF03707 Bacterial signalling protein N terminal repeat BEST7613_4464 PF00563 EAL domain BEST7613_4465 PF00330 Aconitase family (aconitate hydratase) BEST7613_4468 PF00072 Response regulator receiver domain BEST7613_4468 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4468 PF01627 Hpt domain BEST7613_4469 PF00427 Phycobilisome Linker polypeptide BEST7613_4471 PF00563 EAL domain BEST7613_4471 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4471 PF01590 GAF domain BEST7613_4471 PF00360 Phytochrome region BEST7613_4472 PF01609 Transposase DDE domain BEST7613_4473 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4473 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_4476 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BEST7613_4479 PF02469 Fasciclin domain BEST7613_4487 PF12794 Mechanosensitive ion channel inner membrane domain 1 BEST7613_4487 PF00924 Mechanosensitive ion channel BEST7613_4487 PF12795 Mechanosensitive ion channel porin domain BEST7613_4488 PF04025 Domain of unknown function (DUF370) BEST7613_4493 PF01551 Peptidase family M23 BEST7613_4493 PF08525 Opacity-associated protein A N-terminal motif BEST7613_4493 PF01476 LysM domain BEST7613_4494 PF00731 AIR carboxylase BEST7613_4497 PF00400 WD domain, G-beta repeat BEST7613_4497 PF12894 Anaphase-promoting complex subunit 4 WD40 domain BEST7613_4498 PF00535 Glycosyl transferase family 2 BEST7613_4499 PF01521 Iron-sulphur cluster biosynthesis BEST7613_4500 PF04539 Sigma-70 region 3 BEST7613_4500 PF04545 Sigma-70, region 4 BEST7613_4500 PF04542 Sigma-70 region 2 BEST7613_4503 PF00462 Glutaredoxin BEST7613_4504 PF13393 Histidyl-tRNA synthetase BEST7613_4505 PF01488 Shikimate / quinate 5-dehydrogenase BEST7613_4505 PF08501 Shikimate dehydrogenase substrate binding domain BEST7613_4505 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BEST7613_4506 PF01266 FAD dependent oxidoreductase BEST7613_4507 PF00483 Nucleotidyl transferase BEST7613_4509 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEST7613_4509 PF00117 Glutamine amidotransferase class-I BEST7613_4510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEST7613_4510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEST7613_4512 PF01645 Conserved region in glutamate synthase BEST7613_4512 PF04898 Glutamate synthase central domain BEST7613_4512 PF00310 Glutamine amidotransferases class-II BEST7613_4512 PF01493 GXGXG motif BEST7613_4513 PF13409 Glutathione S-transferase, N-terminal domain BEST7613_4516 PF06434 Aconitate hydratase 2 N-terminus BEST7613_4516 PF11791 Aconitate B N-terminal domain BEST7613_4516 PF00330 Aconitase family (aconitate hydratase) BEST7613_4520 PF02445 Quinolinate synthetase A protein BEST7613_4522 PF17944 Arginine decarboxylase C-terminal helical extension BEST7613_4522 PF17810 Arginine decarboxylase helical bundle domain BEST7613_4522 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEST7613_4527 PF03807 NADP oxidoreductase coenzyme F420-dependent BEST7613_4527 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEST7613_4528 PF01432 Peptidase family M3 BEST7613_4530 PF00696 Amino acid kinase family BEST7613_4530 PF13840 ACT domain BEST7613_4534 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_4535 PF04539 Sigma-70 region 3 BEST7613_4535 PF00140 Sigma-70 factor, region 1.2 BEST7613_4535 PF04545 Sigma-70, region 4 BEST7613_4535 PF04542 Sigma-70 region 2 BEST7613_4536 PF01241 Photosystem I psaG / psaK BEST7613_4538 PF02910 Fumarate reductase flavoprotein C-term BEST7613_4538 PF00890 FAD binding domain BEST7613_4539 PF00977 Histidine biosynthesis protein BEST7613_4540 PF14251 Domain of unknown function (DUF4346) BEST7613_4541 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BEST7613_4541 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BEST7613_4542 PF01106 NifU-like domain BEST7613_4543 PF04055 Radical SAM superfamily BEST7613_4544 PF00009 Elongation factor Tu GTP binding domain BEST7613_4544 PF03764 Elongation factor G, domain IV BEST7613_4544 PF14492 Elongation Factor G, domain II BEST7613_4544 PF00679 Elongation factor G C-terminus BEST7613_4544 PF03144 Elongation factor Tu domain 2 BEST7613_4545 PF10396 GTP-binding protein TrmE N-terminus BEST7613_4545 PF01926 50S ribosome-binding GTPase BEST7613_4545 PF12631 MnmE helical domain BEST7613_4547 PF01694 Rhomboid family BEST7613_4548 PF00176 SNF2 family N-terminal domain BEST7613_4548 PF00271 Helicase conserved C-terminal domain BEST7613_4548 PF12419 SNF2 Helicase protein BEST7613_4549 PF00502 Phycobilisome protein BEST7613_4550 PF02417 Chromate transporter BEST7613_4551 PF07963 Prokaryotic N-terminal methylation motif BEST7613_4551 PF08334 Type II secretion system (T2SS), protein G BEST7613_4552 PF08402 TOBE domain BEST7613_4552 PF00005 ABC transporter BEST7613_4553 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4554 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4555 PF09383 NIL domain BEST7613_4559 PF00459 Inositol monophosphatase family BEST7613_4560 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4560 PF00072 Response regulator receiver domain BEST7613_4566 PF01926 50S ribosome-binding GTPase BEST7613_4566 PF12631 MnmE helical domain BEST7613_4566 PF10396 GTP-binding protein TrmE N-terminus BEST7613_4569 PF02132 RecR protein BEST7613_4569 PF13662 Toprim domain BEST7613_4571 PF00210 Ferritin-like domain BEST7613_4573 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BEST7613_4573 PF01565 FAD binding domain BEST7613_4574 PF08245 Mur ligase middle domain BEST7613_4574 PF02875 Mur ligase family, glutamate ligase domain BEST7613_4574 PF01225 Mur ligase family, catalytic domain BEST7613_4575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEST7613_4575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEST7613_4576 PF11940 Domain of unknown function (DUF3458) Ig-like fold BEST7613_4576 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BEST7613_4576 PF01433 Peptidase family M1 domain BEST7613_4580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_4581 PF02657 Fe-S metabolism associated domain BEST7613_4582 PF01180 Dihydroorotate dehydrogenase BEST7613_4583 PF00146 NADH dehydrogenase BEST7613_4584 PF13237 4Fe-4S dicluster domain BEST7613_4585 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BEST7613_4586 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEST7613_4587 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_4587 PF08264 Anticodon-binding domain of tRNA BEST7613_4587 PF10458 Valyl tRNA synthetase tRNA binding arm BEST7613_4588 PF08495 FIST N domain BEST7613_4588 PF10442 FIST C domain BEST7613_4591 PF01168 Alanine racemase, N-terminal domain BEST7613_4592 PF00571 CBS domain BEST7613_4592 PF02163 Peptidase family M50 BEST7613_4594 PF12965 Domain of unknown function (DUF3854) BEST7613_4595 PF01121 Dephospho-CoA kinase BEST7613_4597 PF17770 Ribonuclease J C-terminal domain BEST7613_4597 PF00753 Metallo-beta-lactamase superfamily BEST7613_4597 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BEST7613_4598 PF00701 Dihydrodipicolinate synthetase family BEST7613_4599 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEST7613_4599 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEST7613_4600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEST7613_4600 PF05698 Bacterial trigger factor protein (TF) C-terminus BEST7613_4600 PF05697 Bacterial trigger factor protein (TF) BEST7613_4601 PF00574 Clp protease BEST7613_4602 PF06689 ClpX C4-type zinc finger BEST7613_4602 PF07724 AAA domain (Cdc48 subfamily) BEST7613_4602 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_4603 PF02080 TrkA-C domain BEST7613_4603 PF02254 TrkA-N domain BEST7613_4604 PF00672 HAMP domain BEST7613_4604 PF00909 Ammonium Transporter Family BEST7613_4605 PF00909 Ammonium Transporter Family BEST7613_4605 PF00672 HAMP domain BEST7613_4606 PF00218 Indole-3-glycerol phosphate synthase BEST7613_4608 PF00459 Inositol monophosphatase family BEST7613_4609 PF02075 Crossover junction endodeoxyribonuclease RuvC BEST7613_4610 PF01556 DnaJ C terminal domain BEST7613_4610 PF00226 DnaJ domain BEST7613_4610 PF00684 DnaJ central domain BEST7613_4612 PF03193 RsgA GTPase BEST7613_4614 PF12804 MobA-like NTP transferase domain BEST7613_4614 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_4615 PF01634 ATP phosphoribosyltransferase BEST7613_4616 PF01169 Uncharacterized protein family UPF0016 BEST7613_4618 PF13614 AAA domain BEST7613_4619 PF00124 Photosynthetic reaction centre protein BEST7613_4620 PF01040 UbiA prenyltransferase family BEST7613_4622 PF00436 Single-strand binding protein family BEST7613_4623 PF00731 AIR carboxylase BEST7613_4624 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEST7613_4624 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEST7613_4625 PF02254 TrkA-N domain BEST7613_4625 PF02080 TrkA-C domain BEST7613_4627 PF00152 tRNA synthetases class II (D, K and N) BEST7613_4627 PF01336 OB-fold nucleic acid binding domain BEST7613_4629 PF00248 Aldo/keto reductase family BEST7613_4631 PF05154 TM2 domain BEST7613_4632 PF00005 ABC transporter BEST7613_4634 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_4635 PF00574 Clp protease BEST7613_4636 PF00117 Glutamine amidotransferase class-I BEST7613_4637 PF00535 Glycosyl transferase family 2 BEST7613_4638 PF00750 tRNA synthetases class I (R) BEST7613_4638 PF05746 DALR anticodon binding domain BEST7613_4638 PF03485 Arginyl tRNA synthetase N terminal domain BEST7613_4639 PF01926 50S ribosome-binding GTPase BEST7613_4639 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEST7613_4640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEST7613_4640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEST7613_4641 PF02457 DisA bacterial checkpoint controller nucleotide-binding BEST7613_4642 PF01255 Putative undecaprenyl diphosphate synthase BEST7613_4643 PF01544 CorA-like Mg2+ transporter protein BEST7613_4644 PF00294 pfkB family carbohydrate kinase BEST7613_4647 PF01208 Uroporphyrinogen decarboxylase (URO-D) BEST7613_4648 PF00082 Subtilase family BEST7613_4650 PF01464 Transglycosylase SLT domain BEST7613_4650 PF14718 Soluble lytic murein transglycosylase L domain BEST7613_4651 PF00672 HAMP domain BEST7613_4651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4651 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_4654 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4655 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4656 PF01547 Bacterial extracellular solute-binding protein BEST7613_4657 PF12706 Beta-lactamase superfamily domain BEST7613_4657 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BEST7613_4658 PF08245 Mur ligase middle domain BEST7613_4658 PF02875 Mur ligase family, glutamate ligase domain BEST7613_4658 PF01225 Mur ligase family, catalytic domain BEST7613_4659 PF06508 Queuosine biosynthesis protein QueC BEST7613_4660 PF02548 Ketopantoate hydroxymethyltransferase BEST7613_4661 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus BEST7613_4662 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BEST7613_4664 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEST7613_4664 PF00361 Proton-conducting membrane transporter BEST7613_4664 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BEST7613_4666 PF00005 ABC transporter BEST7613_4667 PF00005 ABC transporter BEST7613_4668 PF04966 Carbohydrate-selective porin, OprB family BEST7613_4669 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4671 PF03466 LysR substrate binding domain BEST7613_4671 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_4672 PF07085 DRTGG domain BEST7613_4678 PF02142 MGS-like domain BEST7613_4678 PF00781 Diacylglycerol kinase catalytic domain BEST7613_4679 PF01903 CbiX BEST7613_4680 PF02686 Glu-tRNAGln amidotransferase C subunit BEST7613_4681 PF01063 Amino-transferase class IV BEST7613_4683 PF14332 Domain of unknown function (DUF4388) BEST7613_4683 PF00072 Response regulator receiver domain BEST7613_4684 PF00072 Response regulator receiver domain BEST7613_4686 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_4686 PF01590 GAF domain BEST7613_4687 PF02743 Cache domain BEST7613_4687 PF00672 HAMP domain BEST7613_4687 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_4688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4688 PF01584 CheW-like domain BEST7613_4688 PF01627 Hpt domain BEST7613_4688 PF00072 Response regulator receiver domain BEST7613_4691 PF00862 Sucrose synthase BEST7613_4691 PF00534 Glycosyl transferases group 1 BEST7613_4693 PF05969 Photosystem II complex subunit Ycf12 BEST7613_4697 PF00005 ABC transporter BEST7613_4697 PF08402 TOBE domain BEST7613_4699 PF10371 Domain of unknown function BEST7613_4699 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_4699 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BEST7613_4699 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BEST7613_4699 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BEST7613_4703 PF00365 Phosphofructokinase BEST7613_4704 PF00924 Mechanosensitive ion channel BEST7613_4705 PF00953 Glycosyl transferase family 4 BEST7613_4705 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BEST7613_4706 PF03683 Uncharacterised protein family (UPF0175) BEST7613_4709 PF01702 Queuine tRNA-ribosyltransferase BEST7613_4710 PF08041 PetM family of cytochrome b6f complex subunit 7 BEST7613_4711 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BEST7613_4715 PF03706 Lysylphosphatidylglycerol synthase TM region BEST7613_4716 PF14489 QueF-like protein BEST7613_4717 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEST7613_4717 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEST7613_4718 PF01042 Endoribonuclease L-PSP BEST7613_4721 PF13546 DDE superfamily endonuclease BEST7613_4723 PF00476 DNA polymerase family A BEST7613_4723 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEST7613_4723 PF01367 5'-3' exonuclease, C-terminal SAM fold BEST7613_4723 PF01612 3'-5' exonuclease BEST7613_4725 PF01544 CorA-like Mg2+ transporter protein BEST7613_4726 PF00690 Cation transporter/ATPase, N-terminus BEST7613_4726 PF00689 Cation transporting ATPase, C-terminus BEST7613_4736 PF13411 MerR HTH family regulatory protein BEST7613_4740 PF01968 Hydantoinase/oxoprolinase BEST7613_4740 PF05378 Hydantoinase/oxoprolinase N-terminal region BEST7613_4741 PF01679 Proteolipid membrane potential modulator BEST7613_4743 PF08239 Bacterial SH3 domain BEST7613_4743 PF00069 Protein kinase domain BEST7613_4745 PF00498 FHA domain BEST7613_4745 PF00005 ABC transporter BEST7613_4745 PF01061 ABC-2 type transporter BEST7613_4746 PF00360 Phytochrome region BEST7613_4746 PF00563 EAL domain BEST7613_4746 PF01590 GAF domain BEST7613_4746 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4749 PF00072 Response regulator receiver domain BEST7613_4749 PF00196 Bacterial regulatory proteins, luxR family BEST7613_4752 PF00795 Carbon-nitrogen hydrolase BEST7613_4755 PF00586 AIR synthase related protein, N-terminal domain BEST7613_4755 PF02769 AIR synthase related protein, C-terminal domain BEST7613_4759 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4759 PF00072 Response regulator receiver domain BEST7613_4760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4760 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_4761 PF00403 Heavy-metal-associated domain BEST7613_4762 PF01022 Bacterial regulatory protein, arsR family BEST7613_4763 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BEST7613_4765 PF02570 Precorrin-8X methylmutase BEST7613_4766 PF07690 Major Facilitator Superfamily BEST7613_4768 PF00873 AcrB/AcrD/AcrF family BEST7613_4770 PF00072 Response regulator receiver domain BEST7613_4770 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4770 PF01627 Hpt domain BEST7613_4771 PF16736 Single Cache-like BEST7613_4771 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_4771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4771 PF00989 PAS fold BEST7613_4772 PF11798 IMS family HHH motif BEST7613_4772 PF13438 Domain of unknown function (DUF4113) BEST7613_4772 PF00817 impB/mucB/samB family BEST7613_4772 PF11799 impB/mucB/samB family C-terminal domain BEST7613_4774 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BEST7613_4775 PF00293 NUDIX domain BEST7613_4775 PF01467 Cytidylyltransferase-like BEST7613_4778 PF00557 Metallopeptidase family M24 BEST7613_4780 PF00905 Penicillin binding protein transpeptidase domain BEST7613_4783 PF05368 NmrA-like family BEST7613_4786 PF00106 short chain dehydrogenase BEST7613_4787 PF00561 alpha/beta hydrolase fold BEST7613_4788 PF06965 Na+/H+ antiporter 1 BEST7613_4788 PF13462 Thioredoxin BEST7613_4789 PF00072 Response regulator receiver domain BEST7613_4789 PF00196 Bacterial regulatory proteins, luxR family BEST7613_4790 PF00672 HAMP domain BEST7613_4790 PF07730 Histidine kinase BEST7613_4790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4795 PF04055 Radical SAM superfamily BEST7613_4795 PF02310 B12 binding domain BEST7613_4798 PF00583 Acetyltransferase (GNAT) family BEST7613_4799 PF02872 5'-nucleotidase, C-terminal domain BEST7613_4800 PF09335 SNARE associated Golgi protein BEST7613_4802 PF01209 ubiE/COQ5 methyltransferase family BEST7613_4803 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4803 PF00072 Response regulator receiver domain BEST7613_4804 PF02896 PEP-utilising enzyme, TIM barrel domain BEST7613_4804 PF00391 PEP-utilising enzyme, mobile domain BEST7613_4804 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BEST7613_4807 PF12773 Double zinc ribbon BEST7613_4807 PF00498 FHA domain BEST7613_4808 PF03775 Septum formation inhibitor MinC, C-terminal domain BEST7613_4809 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEST7613_4810 PF03776 Septum formation topological specificity factor MinE BEST7613_4813 PF13090 Polyphosphate kinase C-terminal domain 2 BEST7613_4813 PF13089 Polyphosphate kinase N-terminal domain BEST7613_4813 PF02503 Polyphosphate kinase middle domain BEST7613_4813 PF17941 Polyphosphate kinase C-terminal domain 1 BEST7613_4815 PF00588 SpoU rRNA Methylase family BEST7613_4817 PF01964 Radical SAM ThiC family BEST7613_4818 PF13546 DDE superfamily endonuclease BEST7613_4820 PF05996 Ferredoxin-dependent bilin reductase BEST7613_4821 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4821 PF00072 Response regulator receiver domain BEST7613_4825 PF13614 AAA domain BEST7613_4826 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4826 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_4826 PF09308 LuxQ, periplasmic BEST7613_4826 PF00072 Response regulator receiver domain BEST7613_4827 PF03109 ABC1 family BEST7613_4831 PF04055 Radical SAM superfamily BEST7613_4832 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_4833 PF01546 Peptidase family M20/M25/M40 BEST7613_4833 PF07687 Peptidase dimerisation domain BEST7613_4836 PF13614 AAA domain BEST7613_4838 PF00092 von Willebrand factor type A domain BEST7613_4839 PF01966 HD domain BEST7613_4839 PF07697 7TM-HD extracellular BEST7613_4839 PF07698 7TM receptor with intracellular HD hydrolase BEST7613_4840 PF01081 KDPG and KHG aldolase BEST7613_4841 PF00909 Ammonium Transporter Family BEST7613_4842 PF13546 DDE superfamily endonuclease BEST7613_4843 PF13181 Tetratricopeptide repeat BEST7613_4843 PF00535 Glycosyl transferase family 2 BEST7613_4846 PF02350 UDP-N-acetylglucosamine 2-epimerase BEST7613_4849 PF00085 Thioredoxin BEST7613_4851 PF02887 Pyruvate kinase, alpha/beta domain BEST7613_4851 PF00224 Pyruvate kinase, barrel domain BEST7613_4855 PF07685 CobB/CobQ-like glutamine amidotransferase domain BEST7613_4855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEST7613_4856 PF00924 Mechanosensitive ion channel BEST7613_4859 PF07690 Major Facilitator Superfamily BEST7613_4860 PF00005 ABC transporter BEST7613_4860 PF00664 ABC transporter transmembrane region BEST7613_4861 PF02685 Glucokinase BEST7613_4862 PF13545 Crp-like helix-turn-helix domain BEST7613_4865 PF01594 AI-2E family transporter BEST7613_4866 PF02547 Queuosine biosynthesis protein BEST7613_4868 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BEST7613_4868 PF14572 Phosphoribosyl synthetase-associated domain BEST7613_4874 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BEST7613_4876 PF00583 Acetyltransferase (GNAT) family BEST7613_4878 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4878 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_4879 PF00805 Pentapeptide repeats (8 copies) BEST7613_4883 PF01618 MotA/TolQ/ExbB proton channel family BEST7613_4884 PF02472 Biopolymer transport protein ExbD/TolR BEST7613_4885 PF02472 Biopolymer transport protein ExbD/TolR BEST7613_4888 PF12795 Mechanosensitive ion channel porin domain BEST7613_4888 PF00924 Mechanosensitive ion channel BEST7613_4888 PF12794 Mechanosensitive ion channel inner membrane domain 1 BEST7613_4889 PF09335 SNARE associated Golgi protein BEST7613_4890 PF00155 Aminotransferase class I and II BEST7613_4893 PF00106 short chain dehydrogenase BEST7613_4895 PF07444 Ycf66 protein N-terminus BEST7613_4896 PF07683 Cobalamin synthesis protein cobW C-terminal domain BEST7613_4896 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEST7613_4897 PF00005 ABC transporter BEST7613_4897 PF12704 MacB-like periplasmic core domain BEST7613_4897 PF02687 FtsX-like permease family BEST7613_4898 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4898 PF00072 Response regulator receiver domain BEST7613_4899 PF07689 KaiB domain BEST7613_4900 PF13847 Methyltransferase domain BEST7613_4902 PF00475 Imidazoleglycerol-phosphate dehydratase BEST7613_4903 PF00005 ABC transporter BEST7613_4905 PF00916 Sulfate permease family BEST7613_4905 PF01740 STAS domain BEST7613_4906 PF01596 O-methyltransferase BEST7613_4907 PF01556 DnaJ C terminal domain BEST7613_4907 PF00226 DnaJ domain BEST7613_4908 PF00535 Glycosyl transferase family 2 BEST7613_4908 PF02709 N-terminal domain of galactosyltransferase BEST7613_4909 PF00171 Aldehyde dehydrogenase family BEST7613_4910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_4911 PF08241 Methyltransferase domain BEST7613_4913 PF00012 Hsp70 protein BEST7613_4914 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEST7613_4914 PF03129 Anticodon binding domain BEST7613_4914 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEST7613_4915 PF00117 Glutamine amidotransferase class-I BEST7613_4916 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEST7613_4916 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEST7613_4917 PF00271 Helicase conserved C-terminal domain BEST7613_4917 PF00270 DEAD/DEAH box helicase BEST7613_4918 PF18693 TRAM domain BEST7613_4918 PF04055 Radical SAM superfamily BEST7613_4918 PF00919 Uncharacterized protein family UPF0004 BEST7613_4919 PF00486 Transcriptional regulatory protein, C terminal BEST7613_4919 PF00072 Response regulator receiver domain BEST7613_4920 PF00075 RNase H BEST7613_4922 PF00437 Type II/IV secretion system protein BEST7613_4923 PF01242 6-pyruvoyl tetrahydropterin synthase BEST7613_4924 PF13580 SIS domain BEST7613_4925 PF08645 Polynucleotide kinase 3 phosphatase BEST7613_4927 PF02374 Anion-transporting ATPase BEST7613_4927 PF17886 HSP20-like domain found in ArsA BEST7613_4928 PF00266 Aminotransferase class-V BEST7613_4929 PF01458 Uncharacterized protein family (UPF0051) BEST7613_4930 PF00005 ABC transporter BEST7613_4931 PF01458 Uncharacterized protein family (UPF0051) BEST7613_4933 PF01584 CheW-like domain BEST7613_4933 PF09078 CheY binding BEST7613_4933 PF02895 Signal transducing histidine kinase, homodimeric domain BEST7613_4933 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_4933 PF01627 Hpt domain BEST7613_4934 PF02527 rRNA small subunit methyltransferase G BEST7613_4936 PF01467 Cytidylyltransferase-like BEST7613_4937 PF01590 GAF domain BEST7613_4937 PF00360 Phytochrome region BEST7613_4937 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4937 PF00563 EAL domain BEST7613_4938 PF02082 Transcriptional regulator BEST7613_4940 PF13085 2Fe-2S iron-sulfur cluster binding domain BEST7613_4943 PF00361 Proton-conducting membrane transporter BEST7613_4943 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEST7613_4943 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BEST7613_4945 PF13735 tRNA nucleotidyltransferase domain 2 putative BEST7613_4945 PF01743 Poly A polymerase head domain BEST7613_4945 PF12627 Probable RNA and SrmB- binding site of polymerase A BEST7613_4946 PF01590 GAF domain BEST7613_4946 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4946 PF00360 Phytochrome region BEST7613_4946 PF00563 EAL domain BEST7613_4949 PF01425 Amidase BEST7613_4950 PF00762 Ferrochelatase BEST7613_4951 PF08241 Methyltransferase domain BEST7613_4952 PF00586 AIR synthase related protein, N-terminal domain BEST7613_4952 PF02769 AIR synthase related protein, C-terminal domain BEST7613_4953 PF03764 Elongation factor G, domain IV BEST7613_4953 PF00009 Elongation factor Tu GTP binding domain BEST7613_4953 PF14492 Elongation Factor G, domain II BEST7613_4953 PF00679 Elongation factor G C-terminus BEST7613_4955 PF16363 GDP-mannose 4,6 dehydratase BEST7613_4956 PF17863 AAA lid domain BEST7613_4956 PF07726 ATPase family associated with various cellular activities (AAA) BEST7613_4957 PF00772 DnaB-like helicase N terminal domain BEST7613_4957 PF14528 LAGLIDADG-like domain BEST7613_4957 PF03796 DnaB-like helicase C terminal domain BEST7613_4960 PF12911 N-terminal TM domain of oligopeptide transport permease C BEST7613_4960 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_4961 PF00916 Sulfate permease family BEST7613_4961 PF01740 STAS domain BEST7613_4962 PF00563 EAL domain BEST7613_4962 PF01590 GAF domain BEST7613_4962 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_4962 PF00360 Phytochrome region BEST7613_4963 PF00842 Alanine racemase, C-terminal domain BEST7613_4963 PF01168 Alanine racemase, N-terminal domain BEST7613_4964 PF01084 Ribosomal protein S18 BEST7613_4965 PF00471 Ribosomal protein L33 BEST7613_4966 PF00326 Prolyl oligopeptidase family BEST7613_4967 PF01370 NAD dependent epimerase/dehydratase family BEST7613_4969 PF12849 PBP superfamily domain BEST7613_4972 PF06838 Methionine gamma-lyase BEST7613_4975 PF16177 Acetyl-coenzyme A synthetase N-terminus BEST7613_4975 PF00501 AMP-binding enzyme BEST7613_4975 PF13193 AMP-binding enzyme C-terminal domain BEST7613_4976 PF11016 Protein of unknown function (DUF2854) BEST7613_4977 PF00067 Cytochrome P450 BEST7613_4987 PF01253 Translation initiation factor SUI1 BEST7613_4989 PF11074 Domain of unknown function(DUF2779) BEST7613_4990 PF02811 PHP domain BEST7613_4991 PF00753 Metallo-beta-lactamase superfamily BEST7613_4991 PF01613 Flavin reductase like domain BEST7613_4992 PF07884 Vitamin K epoxide reductase family BEST7613_4993 PF12697 Alpha/beta hydrolase family BEST7613_4994 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain BEST7613_4995 PF00557 Metallopeptidase family M24 BEST7613_4996 PF02080 TrkA-C domain BEST7613_4996 PF00999 Sodium/hydrogen exchanger family BEST7613_4996 PF03471 Transporter associated domain BEST7613_4997 PF13458 Periplasmic binding protein BEST7613_4999 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) BEST7613_5000 PF01195 Peptidyl-tRNA hydrolase BEST7613_5002 PF11910 Cyanobacterial and plant NDH-1 subunit O BEST7613_5003 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BEST7613_5003 PF00056 lactate/malate dehydrogenase, NAD binding domain BEST7613_5004 PF02261 Aspartate decarboxylase BEST7613_5005 PF00293 NUDIX domain BEST7613_5007 PF00557 Metallopeptidase family M24 BEST7613_5009 PF00155 Aminotransferase class I and II BEST7613_5016 PF00421 Photosystem II protein BEST7613_5017 PF02310 B12 binding domain BEST7613_5017 PF04055 Radical SAM superfamily BEST7613_5018 PF01078 Magnesium chelatase, subunit ChlI BEST7613_5018 PF13335 Magnesium chelatase, subunit ChlI C-terminal BEST7613_5020 PF02391 MoaE protein BEST7613_5022 PF12804 MobA-like NTP transferase domain BEST7613_5022 PF01967 MoaC family BEST7613_5023 PF04055 Radical SAM superfamily BEST7613_5023 PF06463 Molybdenum Cofactor Synthesis C BEST7613_5024 PF03453 MoeA N-terminal region (domain I and II) BEST7613_5024 PF00994 Probable molybdopterin binding domain BEST7613_5024 PF03454 MoeA C-terminal region (domain IV) BEST7613_5025 PF02560 Cyanate lyase C-terminal domain BEST7613_5026 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEST7613_5026 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEST7613_5027 PF00041 Fibronectin type III domain BEST7613_5027 PF00942 Cellulose binding domain BEST7613_5027 PF00759 Glycosyl hydrolase family 9 BEST7613_5027 PF00553 Cellulose binding domain BEST7613_5028 PF01554 MatE BEST7613_5029 PF16859 Tetracyclin repressor-like, C-terminal domain BEST7613_5029 PF00440 Bacterial regulatory proteins, tetR family BEST7613_5032 PF02607 B12 binding domain BEST7613_5032 PF02574 Homocysteine S-methyltransferase BEST7613_5032 PF00809 Pterin binding enzyme BEST7613_5032 PF02965 Vitamin B12 dependent methionine synthase, activation domain BEST7613_5032 PF02310 B12 binding domain BEST7613_5038 PF02965 Vitamin B12 dependent methionine synthase, activation domain BEST7613_5038 PF00809 Pterin binding enzyme BEST7613_5038 PF02607 B12 binding domain BEST7613_5038 PF02574 Homocysteine S-methyltransferase BEST7613_5038 PF02310 B12 binding domain BEST7613_5041 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5041 PF00989 PAS fold BEST7613_5041 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5043 PF02941 Ferredoxin thioredoxin reductase variable alpha chain BEST7613_5046 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEST7613_5047 PF03061 Thioesterase superfamily BEST7613_5048 PF13533 Biotin-lipoyl like BEST7613_5052 PF00005 ABC transporter BEST7613_5052 PF06472 ABC transporter transmembrane region 2 BEST7613_5055 PF02325 YGGT family BEST7613_5056 PF02754 Cysteine-rich domain BEST7613_5057 PF04539 Sigma-70 region 3 BEST7613_5057 PF04545 Sigma-70, region 4 BEST7613_5057 PF00140 Sigma-70 factor, region 1.2 BEST7613_5057 PF04542 Sigma-70 region 2 BEST7613_5058 PF13230 Glutamine amidotransferases class-II BEST7613_5060 PF13091 PLD-like domain BEST7613_5063 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BEST7613_5065 PF00581 Rhodanese-like domain BEST7613_5066 PF08486 Stage II sporulation protein BEST7613_5066 PF04122 Putative cell wall binding repeat 2 BEST7613_5068 PF02021 Uncharacterised protein family UPF0102 BEST7613_5069 PF00994 Probable molybdopterin binding domain BEST7613_5069 PF18146 Damage-inducible protein CinA KH domain BEST7613_5069 PF02464 Competence-damaged protein BEST7613_5070 PF01227 GTP cyclohydrolase I BEST7613_5071 PF00156 Phosphoribosyl transferase domain BEST7613_5073 PF02142 MGS-like domain BEST7613_5073 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEST7613_5073 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_5075 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BEST7613_5079 PF00171 Aldehyde dehydrogenase family BEST7613_5080 PF00005 ABC transporter BEST7613_5081 PF03330 Lytic transglycolase BEST7613_5083 PF02559 CarD-like/TRCF domain BEST7613_5083 PF00270 DEAD/DEAH box helicase BEST7613_5083 PF00271 Helicase conserved C-terminal domain BEST7613_5083 PF17757 UvrB interaction domain BEST7613_5083 PF03461 TRCF domain BEST7613_5084 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEST7613_5087 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BEST7613_5087 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_5088 PF00534 Glycosyl transferases group 1 BEST7613_5088 PF13477 Glycosyl transferase 4-like BEST7613_5094 PF01891 Cobalt uptake substrate-specific transmembrane region BEST7613_5096 PF00005 ABC transporter BEST7613_5098 PF03989 DNA gyrase C-terminal domain, beta-propeller BEST7613_5098 PF00521 DNA gyrase/topoisomerase IV, subunit A BEST7613_5101 PF00999 Sodium/hydrogen exchanger family BEST7613_5101 PF00582 Universal stress protein family BEST7613_5103 PF00300 Histidine phosphatase superfamily (branch 1) BEST7613_5104 PF00072 Response regulator receiver domain BEST7613_5104 PF00486 Transcriptional regulatory protein, C terminal BEST7613_5106 PF01966 HD domain BEST7613_5106 PF13286 Phosphohydrolase-associated domain BEST7613_5108 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_5108 PF09334 tRNA synthetases class I (M) BEST7613_5108 PF08264 Anticodon-binding domain of tRNA BEST7613_5109 PF00795 Carbon-nitrogen hydrolase BEST7613_5110 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BEST7613_5113 PF16582 Middle domain of thiamine pyrophosphate BEST7613_5113 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_5113 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_5114 PF01207 Dihydrouridine synthase (Dus) BEST7613_5117 PF03092 BT1 family BEST7613_5118 PF10693 Protein of unknown function (DUF2499) BEST7613_5120 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5120 PF00989 PAS fold BEST7613_5120 PF16736 Single Cache-like BEST7613_5121 PF05552 Conserved TM helix BEST7613_5121 PF00924 Mechanosensitive ion channel BEST7613_5122 PF02091 Glycyl-tRNA synthetase alpha subunit BEST7613_5125 PF02654 Cobalamin-5-phosphate synthase BEST7613_5127 PF08669 Glycine cleavage T-protein C-terminal barrel domain BEST7613_5127 PF01571 Aminomethyltransferase folate-binding domain BEST7613_5129 PF05690 Thiazole biosynthesis protein ThiG BEST7613_5129 PF01266 FAD dependent oxidoreductase BEST7613_5130 PF17864 RuvB AAA lid domain BEST7613_5130 PF05491 RuvB C-terminal winged helix domain BEST7613_5130 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEST7613_5132 PF01169 Uncharacterized protein family UPF0016 BEST7613_5133 PF01043 SecA preprotein cross-linking domain BEST7613_5133 PF07516 SecA Wing and Scaffold domain BEST7613_5133 PF07517 SecA DEAD-like domain BEST7613_5136 PF04012 PspA/IM30 family BEST7613_5137 PF00253 Ribosomal protein S14p/S29e BEST7613_5138 PF01815 Rop protein BEST7613_5140 PF07690 Major Facilitator Superfamily BEST7613_5141 PF07690 Major Facilitator Superfamily BEST7613_5144 PF00330 Aconitase family (aconitate hydratase) BEST7613_5145 PF00180 Isocitrate/isopropylmalate dehydrogenase BEST7613_5146 PF08502 LeuA allosteric (dimerisation) domain BEST7613_5146 PF00682 HMGL-like BEST7613_5147 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BEST7613_5147 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BEST7613_5148 PF10369 Small subunit of acetolactate synthase BEST7613_5148 PF01842 ACT domain BEST7613_5149 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_5149 PF00205 Thiamine pyrophosphate enzyme, central domain BEST7613_5149 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_5151 PF00583 Acetyltransferase (GNAT) family BEST7613_5152 PF09557 Domain of unknown function (DUF2382) BEST7613_5152 PF11181 Heat induced stress protein YflT BEST7613_5153 PF12850 Calcineurin-like phosphoesterase superfamily domain BEST7613_5154 PF01725 Ham1 family BEST7613_5155 PF01138 3' exoribonuclease family, domain 1 BEST7613_5155 PF03725 3' exoribonuclease family, domain 2 BEST7613_5156 PF10646 Sporulation and spore germination BEST7613_5157 PF01177 Asp/Glu/Hydantoin racemase BEST7613_5158 PF01047 MarR family BEST7613_5159 PF00196 Bacterial regulatory proteins, luxR family BEST7613_5160 PF03061 Thioesterase superfamily BEST7613_5161 PF13085 2Fe-2S iron-sulfur cluster binding domain BEST7613_5161 PF13183 4Fe-4S dicluster domain BEST7613_5162 PF00890 FAD binding domain BEST7613_5162 PF02910 Fumarate reductase flavoprotein C-term BEST7613_5163 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEST7613_5164 PF10702 Protein of unknown function (DUF2507) BEST7613_5165 PF13840 ACT domain BEST7613_5165 PF01842 ACT domain BEST7613_5165 PF00696 Amino acid kinase family BEST7613_5166 PF08459 UvrC Helix-hairpin-helix N-terminal BEST7613_5166 PF01541 GIY-YIG catalytic domain BEST7613_5166 PF02151 UvrB/uvrC motif BEST7613_5167 PF00085 Thioredoxin BEST7613_5168 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BEST7613_5169 PF00766 Electron transfer flavoprotein FAD-binding domain BEST7613_5169 PF01012 Electron transfer flavoprotein domain BEST7613_5170 PF01012 Electron transfer flavoprotein domain BEST7613_5171 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_5172 PF08359 YsiA-like protein, C-terminal region BEST7613_5172 PF00440 Bacterial regulatory proteins, tetR family BEST7613_5173 PF13193 AMP-binding enzyme C-terminal domain BEST7613_5173 PF00501 AMP-binding enzyme BEST7613_5174 PF03994 Domain of Unknown Function (DUF350) BEST7613_5175 PF00488 MutS domain V BEST7613_5175 PF01713 Smr domain BEST7613_5176 PF14791 DNA polymerase beta thumb BEST7613_5176 PF14716 Helix-hairpin-helix domain BEST7613_5176 PF02811 PHP domain BEST7613_5177 PF02674 Colicin V production protein BEST7613_5178 PF05164 Cell division protein ZapA BEST7613_5179 PF11858 Domain of unknown function (DUF3378) BEST7613_5179 PF01351 Ribonuclease HII BEST7613_5180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BEST7613_5180 PF01588 Putative tRNA binding domain BEST7613_5180 PF03147 Ferredoxin-fold anticodon binding domain BEST7613_5180 PF03483 B3/4 domain BEST7613_5180 PF03484 tRNA synthetase B5 domain BEST7613_5181 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BEST7613_5181 PF01409 tRNA synthetases class II core domain (F) BEST7613_5182 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEST7613_5182 PF00588 SpoU rRNA Methylase family BEST7613_5183 PF14098 Small, acid-soluble spore protein I BEST7613_5184 PF05651 Putative sugar diacid recognition BEST7613_5184 PF13556 PucR C-terminal helix-turn-helix domain BEST7613_5184 PF17853 GGDEF-like domain BEST7613_5185 PF01565 FAD binding domain BEST7613_5185 PF02913 FAD linked oxidases, C-terminal domain BEST7613_5186 PF13183 4Fe-4S dicluster domain BEST7613_5186 PF02754 Cysteine-rich domain BEST7613_5187 PF12681 Glyoxalase-like domain BEST7613_5189 PF02554 Carbon starvation protein CstA BEST7613_5189 PF13722 5TM C-terminal transporter carbon starvation CstA BEST7613_5190 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BEST7613_5191 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5192 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5193 PF01547 Bacterial extracellular solute-binding protein BEST7613_5194 PF13685 Iron-containing alcohol dehydrogenase BEST7613_5195 PF13344 Haloacid dehalogenase-like hydrolase BEST7613_5196 PF00596 Class II Aldolase and Adducin N-terminal domain BEST7613_5197 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEST7613_5197 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_5198 PF11762 L-arabinose isomerase C-terminal domain BEST7613_5198 PF02610 L-arabinose isomerase BEST7613_5199 PF04616 Glycosyl hydrolases family 43 BEST7613_5200 PF05343 M42 glutamyl aminopeptidase BEST7613_5202 PF06961 Protein of unknown function (DUF1294) BEST7613_5203 PF00453 Ribosomal protein L20 BEST7613_5204 PF01632 Ribosomal protein L35 BEST7613_5205 PF05198 Translation initiation factor IF-3, N-terminal domain BEST7613_5205 PF00707 Translation initiation factor IF-3, C-terminal domain BEST7613_5207 PF04172 LrgB-like family BEST7613_5208 PF03788 LrgA family BEST7613_5209 PF04397 LytTr DNA-binding domain BEST7613_5209 PF00072 Response regulator receiver domain BEST7613_5210 PF06580 Histidine kinase BEST7613_5210 PF07694 5TMR of 5TMR-LYT BEST7613_5210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5212 PF02824 TGS domain BEST7613_5212 PF03129 Anticodon binding domain BEST7613_5212 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEST7613_5212 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEST7613_5213 PF08812 YtxC-like family BEST7613_5214 PF09335 SNARE associated Golgi protein BEST7613_5215 PF07319 Primosomal protein DnaI N-terminus BEST7613_5215 PF01695 IstB-like ATP binding protein BEST7613_5216 PF07261 Replication initiation and membrane attachment BEST7613_5217 PF03477 ATP cone domain BEST7613_5218 PF02675 S-adenosylmethionine decarboxylase BEST7613_5219 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEST7613_5219 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEST7613_5220 PF01638 HxlR-like helix-turn-helix BEST7613_5221 PF07690 Major Facilitator Superfamily BEST7613_5222 PF00248 Aldo/keto reductase family BEST7613_5223 PF01121 Dephospho-CoA kinase BEST7613_5224 PF02659 Putative manganese efflux pump BEST7613_5225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BEST7613_5225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BEST7613_5225 PF06827 Zinc finger found in FPG and IleRS BEST7613_5226 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEST7613_5226 PF01367 5'-3' exonuclease, C-terminal SAM fold BEST7613_5226 PF00476 DNA polymerase family A BEST7613_5227 PF00989 PAS fold BEST7613_5227 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5227 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5227 PF16736 Single Cache-like BEST7613_5228 PF00072 Response regulator receiver domain BEST7613_5228 PF00486 Transcriptional regulatory protein, C terminal BEST7613_5229 PF00056 lactate/malate dehydrogenase, NAD binding domain BEST7613_5229 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BEST7613_5230 PF00180 Isocitrate/isopropylmalate dehydrogenase BEST7613_5231 PF00285 Citrate synthase, C-terminal domain BEST7613_5232 PF04284 Protein of unknown function (DUF441) BEST7613_5233 PF01594 AI-2E family transporter BEST7613_5234 PF04186 FxsA cytoplasmic membrane protein BEST7613_5235 PF02887 Pyruvate kinase, alpha/beta domain BEST7613_5235 PF00391 PEP-utilising enzyme, mobile domain BEST7613_5235 PF00224 Pyruvate kinase, barrel domain BEST7613_5236 PF00365 Phosphofructokinase BEST7613_5237 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BEST7613_5238 PF01039 Carboxyl transferase domain BEST7613_5238 PF17848 Acetyl-coA carboxylase zinc finger domain BEST7613_5239 PF00390 Malic enzyme, N-terminal domain BEST7613_5239 PF03949 Malic enzyme, NAD binding domain BEST7613_5240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEST7613_5240 PF01336 OB-fold nucleic acid binding domain BEST7613_5240 PF14579 Helix-hairpin-helix motif BEST7613_5240 PF02811 PHP domain BEST7613_5240 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEST7613_5241 PF14034 Sporulation protein YtrH BEST7613_5244 PF02272 DHHA1 domain BEST7613_5244 PF01368 DHH family BEST7613_5245 PF14007 YtpI-like protein BEST7613_5246 PF03061 Thioesterase superfamily BEST7613_5246 PF00392 Bacterial regulatory proteins, gntR family BEST7613_5246 PF07085 DRTGG domain BEST7613_5246 PF00571 CBS domain BEST7613_5247 PF01925 Sulfite exporter TauE/SafE BEST7613_5248 PF01546 Peptidase family M20/M25/M40 BEST7613_5248 PF07687 Peptidase dimerisation domain BEST7613_5249 PF01687 Riboflavin kinase BEST7613_5250 PF00296 Luciferase-like monooxygenase BEST7613_5251 PF00462 Glutaredoxin BEST7613_5252 PF00296 Luciferase-like monooxygenase BEST7613_5253 PF00005 ABC transporter BEST7613_5254 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5255 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5256 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_5257 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_5258 PF00583 Acetyltransferase (GNAT) family BEST7613_5259 PF03466 LysR substrate binding domain BEST7613_5259 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_5263 PF14698 Argininosuccinate lyase C-terminal BEST7613_5263 PF00206 Lyase BEST7613_5264 PF00764 Arginosuccinate synthase BEST7613_5265 PF00764 Arginosuccinate synthase BEST7613_5266 PF00994 Probable molybdopterin binding domain BEST7613_5267 PF00871 Acetokinase family BEST7613_5268 PF02384 N-6 DNA Methylase BEST7613_5269 PF08534 Redoxin BEST7613_5270 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BEST7613_5271 PF11167 Protein of unknown function (DUF2953) BEST7613_5272 PF06271 RDD family BEST7613_5273 PF01343 Peptidase family S49 BEST7613_5274 PF01513 ATP-NAD kinase BEST7613_5275 PF07969 Amidohydrolase family BEST7613_5276 PF00501 AMP-binding enzyme BEST7613_5276 PF13193 AMP-binding enzyme C-terminal domain BEST7613_5277 PF00269 Small, acid-soluble spore proteins, alpha/beta type BEST7613_5278 PF02568 Thiamine biosynthesis protein (ThiI) BEST7613_5278 PF02926 THUMP domain BEST7613_5279 PF00266 Aminotransferase class-V BEST7613_5280 PF05525 Branched-chain amino acid transport protein BEST7613_5281 PF06160 Septation ring formation regulator, EzrA BEST7613_5282 PF02811 PHP domain BEST7613_5283 PF00440 Bacterial regulatory proteins, tetR family BEST7613_5284 PF13185 GAF domain BEST7613_5285 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_5286 PF00163 Ribosomal protein S4/S9 N-terminal domain BEST7613_5286 PF01479 S4 domain BEST7613_5288 PF00579 tRNA synthetases class I (W and Y) BEST7613_5288 PF01479 S4 domain BEST7613_5289 PF00501 AMP-binding enzyme BEST7613_5289 PF13193 AMP-binding enzyme C-terminal domain BEST7613_5290 PF00583 Acetyltransferase (GNAT) family BEST7613_5291 PF00571 CBS domain BEST7613_5292 PF00850 Histone deacetylase domain BEST7613_5293 PF00691 OmpA family BEST7613_5293 PF13677 Membrane MotB of proton-channel complex MotA/MotB BEST7613_5294 PF01618 MotA/TolQ/ExbB proton channel family BEST7613_5295 PF00356 Bacterial regulatory proteins, lacI family BEST7613_5296 PF01817 Chorismate mutase type II BEST7613_5296 PF00793 DAHP synthetase I family BEST7613_5297 PF11009 Protein of unknown function (DUF2847) BEST7613_5298 PF12732 YtxH-like protein BEST7613_5299 PF06103 Bacterial protein of unknown function (DUF948) BEST7613_5300 PF01225 Mur ligase family, catalytic domain BEST7613_5300 PF02875 Mur ligase family, glutamate ligase domain BEST7613_5300 PF08245 Mur ligase middle domain BEST7613_5301 PF01580 FtsK/SpoIIIE family BEST7613_5301 PF09397 Ftsk gamma domain BEST7613_5301 PF17854 FtsK alpha domain BEST7613_5302 PF14794 Domain of unknown function (DUF4479) BEST7613_5302 PF01588 Putative tRNA binding domain BEST7613_5303 PF07285 Protein of unknown function (DUF1444) BEST7613_5304 PF00085 Thioredoxin BEST7613_5305 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BEST7613_5306 PF05343 M42 glutamyl aminopeptidase BEST7613_5307 PF03413 Peptidase propeptide and YPEB domain BEST7613_5308 PF00390 Malic enzyme, N-terminal domain BEST7613_5308 PF03949 Malic enzyme, NAD binding domain BEST7613_5309 PF00753 Metallo-beta-lactamase superfamily BEST7613_5310 PF02390 Putative methyltransferase BEST7613_5311 PF14165 YtzH-like protein BEST7613_5312 PF01636 Phosphotransferase enzyme family BEST7613_5313 PF17999 Pullulanase N1-terminal domain BEST7613_5313 PF00128 Alpha amylase, catalytic domain BEST7613_5313 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEST7613_5314 PF00781 Diacylglycerol kinase catalytic domain BEST7613_5317 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_5318 PF01546 Peptidase family M20/M25/M40 BEST7613_5319 PF00860 Permease family BEST7613_5320 PF05975 Bacterial ABC transporter protein EcsB BEST7613_5321 PF00005 ABC transporter BEST7613_5323 PF08220 DeoR-like helix-turn-helix domain BEST7613_5324 PF01479 S4 domain BEST7613_5324 PF00849 RNA pseudouridylate synthase BEST7613_5325 PF14667 Polysaccharide biosynthesis C-terminal domain BEST7613_5325 PF01943 Polysaccharide biosynthesis protein BEST7613_5327 PF02028 BCCT, betaine/carnitine/choline family transporter BEST7613_5328 PF10957 Sporulation protein Cse60 BEST7613_5329 PF04854 Protein of unknown function, DUF624 BEST7613_5330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_5330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_5332 PF07470 Glycosyl Hydrolase Family 88 BEST7613_5333 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5334 PF12833 Helix-turn-helix domain BEST7613_5334 PF17853 GGDEF-like domain BEST7613_5335 PF13416 Bacterial extracellular solute-binding protein BEST7613_5336 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5337 PF01370 NAD dependent epimerase/dehydratase family BEST7613_5338 PF00067 Cytochrome P450 BEST7613_5339 PF06968 Biotin and Thiamin Synthesis associated domain BEST7613_5339 PF04055 Radical SAM superfamily BEST7613_5341 PF00155 Aminotransferase class I and II BEST7613_5342 PF00202 Aminotransferase class-III BEST7613_5343 PF03744 6-carboxyhexanoate--CoA ligase BEST7613_5344 PF01738 Dienelactone hydrolase family BEST7613_5349 PF02056 Family 4 glycosyl hydrolase BEST7613_5349 PF11975 Family 4 glycosyl hydrolase C-terminal domain BEST7613_5350 PF00581 Rhodanese-like domain BEST7613_5351 PF13603 Leucyl-tRNA synthetase, Domain 2 BEST7613_5351 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_5351 PF08264 Anticodon-binding domain of tRNA BEST7613_5351 PF09334 tRNA synthetases class I (M) BEST7613_5352 PF14074 Protein of unknown function (DUF4257) BEST7613_5353 PF01740 STAS domain BEST7613_5353 PF13426 PAS domain BEST7613_5354 PF07690 Major Facilitator Superfamily BEST7613_5355 PF04791 LMBR1-like membrane protein BEST7613_5356 PF02687 FtsX-like permease family BEST7613_5357 PF00005 ABC transporter BEST7613_5358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5359 PF00486 Transcriptional regulatory protein, C terminal BEST7613_5359 PF00072 Response regulator receiver domain BEST7613_5360 PF12704 MacB-like periplasmic core domain BEST7613_5360 PF02687 FtsX-like permease family BEST7613_5361 PF00005 ABC transporter BEST7613_5364 PF00005 ABC transporter BEST7613_5365 PF00392 Bacterial regulatory proteins, gntR family BEST7613_5366 PF10732 Protein of unknown function (DUF2524) BEST7613_5367 PF04055 Radical SAM superfamily BEST7613_5367 PF16199 Radical_SAM C-terminal domain BEST7613_5368 PF06962 Putative rRNA methylase BEST7613_5370 PF00302 Chloramphenicol acetyltransferase BEST7613_5371 PF07516 SecA Wing and Scaffold domain BEST7613_5371 PF01043 SecA preprotein cross-linking domain BEST7613_5371 PF07517 SecA DEAD-like domain BEST7613_5374 PF04012 PspA/IM30 family BEST7613_5375 PF00253 Ribosomal protein S14p/S29e BEST7613_5377 PF12849 PBP superfamily domain BEST7613_5378 PF12849 PBP superfamily domain BEST7613_5379 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5380 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5381 PF00005 ABC transporter BEST7613_5382 PF00005 ABC transporter BEST7613_5383 PF08534 Redoxin BEST7613_5384 PF11412 Disulphide bond corrector protein DsbC BEST7613_5384 PF02683 Cytochrome C biogenesis protein transmembrane region BEST7613_5385 PF04545 Sigma-70, region 4 BEST7613_5385 PF04542 Sigma-70 region 2 BEST7613_5387 PF00999 Sodium/hydrogen exchanger family BEST7613_5391 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BEST7613_5391 PF01409 tRNA synthetases class II core domain (F) BEST7613_5393 PF01648 4'-phosphopantetheinyl transferase superfamily BEST7613_5394 PF01842 ACT domain BEST7613_5394 PF00742 Homoserine dehydrogenase BEST7613_5394 PF03447 Homoserine dehydrogenase, NAD binding domain BEST7613_5396 PF01050 Mannose-6-phosphate isomerase BEST7613_5396 PF00483 Nucleotidyl transferase BEST7613_5397 PF13193 AMP-binding enzyme C-terminal domain BEST7613_5397 PF00501 AMP-binding enzyme BEST7613_5400 PF03023 Lipid II flippase MurJ BEST7613_5402 PF00672 HAMP domain BEST7613_5402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5402 PF13426 PAS domain BEST7613_5402 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5403 PF10458 Valyl tRNA synthetase tRNA binding arm BEST7613_5403 PF08264 Anticodon-binding domain of tRNA BEST7613_5403 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase BEST7613_5403 PF00133 tRNA synthetases class I (I, L, M and V) BEST7613_5404 PF05175 Methyltransferase small domain BEST7613_5404 PF17827 PrmC N-terminal domain BEST7613_5405 PF17862 AAA+ lid domain BEST7613_5405 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_5405 PF01434 Peptidase family M41 BEST7613_5407 PF00551 Formyl transferase BEST7613_5408 PF06596 Photosystem II reaction centre X protein (PsbX) BEST7613_5410 PF12344 Ultra-violet resistance protein B BEST7613_5410 PF02151 UvrB/uvrC motif BEST7613_5410 PF04851 Type III restriction enzyme, res subunit BEST7613_5410 PF00271 Helicase conserved C-terminal domain BEST7613_5410 PF17757 UvrB interaction domain BEST7613_5411 PF00072 Response regulator receiver domain BEST7613_5412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5412 PF00360 Phytochrome region BEST7613_5412 PF08446 PAS fold BEST7613_5412 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5412 PF01590 GAF domain BEST7613_5413 PF00171 Aldehyde dehydrogenase family BEST7613_5415 PF00163 Ribosomal protein S4/S9 N-terminal domain BEST7613_5415 PF01479 S4 domain BEST7613_5417 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEST7613_5417 PF00005 ABC transporter BEST7613_5418 PF00551 Formyl transferase BEST7613_5418 PF02911 Formyl transferase, C-terminal domain BEST7613_5419 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEST7613_5421 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEST7613_5421 PF02785 Biotin carboxylase C-terminal domain BEST7613_5421 PF00289 Biotin carboxylase, N-terminal domain BEST7613_5422 PF01883 Iron-sulfur cluster assembly protein BEST7613_5422 PF10609 NUBPL iron-transfer P-loop NTPase BEST7613_5423 PF05193 Peptidase M16 inactive domain BEST7613_5423 PF00675 Insulinase (Peptidase family M16) BEST7613_5424 PF01872 RibD C-terminal domain BEST7613_5424 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEST7613_5426 PF02926 THUMP domain BEST7613_5426 PF01170 Putative RNA methylase family UPF0020 BEST7613_5427 PF00437 Type II/IV secretion system protein BEST7613_5428 PF01025 GrpE BEST7613_5429 PF00012 Hsp70 protein BEST7613_5430 PF01594 AI-2E family transporter BEST7613_5436 PF01594 AI-2E family transporter BEST7613_5438 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_5439 PF01040 UbiA prenyltransferase family BEST7613_5440 PF00117 Glutamine amidotransferase class-I BEST7613_5441 PF01219 Prokaryotic diacylglycerol kinase BEST7613_5442 PF02130 Uncharacterized protein family UPF0054 BEST7613_5444 PF10369 Small subunit of acetolactate synthase BEST7613_5446 PF00043 Glutathione S-transferase, C-terminal domain BEST7613_5446 PF02798 Glutathione S-transferase, N-terminal domain BEST7613_5449 PF00484 Carbonic anhydrase BEST7613_5450 PF01842 ACT domain BEST7613_5450 PF00551 Formyl transferase BEST7613_5453 PF12706 Beta-lactamase superfamily domain BEST7613_5455 PF03435 Saccharopine dehydrogenase NADP binding domain BEST7613_5455 PF16653 Saccharopine dehydrogenase C-terminal domain BEST7613_5456 PF12697 Alpha/beta hydrolase family BEST7613_5457 PF00300 Histidine phosphatase superfamily (branch 1) BEST7613_5458 PF00285 Citrate synthase, C-terminal domain BEST7613_5459 PF00155 Aminotransferase class I and II BEST7613_5466 PF01565 FAD binding domain BEST7613_5466 PF02913 FAD linked oxidases, C-terminal domain BEST7613_5471 PF00364 Biotin-requiring enzyme BEST7613_5472 PF08207 Elongation factor P (EF-P) KOW-like domain BEST7613_5472 PF09285 Elongation factor P, C-terminal BEST7613_5472 PF01132 Elongation factor P (EF-P) OB domain BEST7613_5473 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEST7613_5474 PF13378 Enolase C-terminal domain-like BEST7613_5475 PF03061 Thioesterase superfamily BEST7613_5476 PF04286 Protein of unknown function (DUF445) BEST7613_5481 PF00005 ABC transporter BEST7613_5482 PF00118 TCP-1/cpn60 chaperonin family BEST7613_5483 PF13640 2OG-Fe(II) oxygenase superfamily BEST7613_5484 PF00085 Thioredoxin BEST7613_5485 PF09335 SNARE associated Golgi protein BEST7613_5487 PF00730 HhH-GPD superfamily base excision DNA repair protein BEST7613_5490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEST7613_5490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEST7613_5491 PF00902 Sec-independent protein translocase protein (TatC) BEST7613_5492 PF02190 ATP-dependent protease La (LON) substrate-binding domain BEST7613_5492 PF05362 Lon protease (S16) C-terminal proteolytic domain BEST7613_5492 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_5493 PF06480 FtsH Extracellular BEST7613_5493 PF01434 Peptidase family M41 BEST7613_5493 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_5493 PF17862 AAA+ lid domain BEST7613_5496 PF00127 Copper binding proteins, plastocyanin/azurin family BEST7613_5500 PF01134 Glucose inhibited division protein A BEST7613_5500 PF13932 GidA associated domain BEST7613_5501 PF00672 HAMP domain BEST7613_5501 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5501 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5501 PF13426 PAS domain BEST7613_5502 PF01134 Glucose inhibited division protein A BEST7613_5505 PF02092 Glycyl-tRNA synthetase beta subunit BEST7613_5505 PF05746 DALR anticodon binding domain BEST7613_5506 PF00483 Nucleotidyl transferase BEST7613_5507 PF11266 Long-chain fatty aldehyde decarbonylase BEST7613_5508 PF01488 Shikimate / quinate 5-dehydrogenase BEST7613_5512 PF02673 Bacitracin resistance protein BacA BEST7613_5513 PF00145 C-5 cytosine-specific DNA methylase BEST7613_5514 PF00117 Glutamine amidotransferase class-I BEST7613_5514 PF00958 GMP synthase C terminal domain BEST7613_5516 PF00905 Penicillin binding protein transpeptidase domain BEST7613_5516 PF00912 Transglycosylase BEST7613_5517 PF01343 Peptidase family S49 BEST7613_5518 PF00270 DEAD/DEAH box helicase BEST7613_5518 PF00271 Helicase conserved C-terminal domain BEST7613_5518 PF17191 RecG wedge domain BEST7613_5519 PF03109 ABC1 family BEST7613_5520 PF00155 Aminotransferase class I and II BEST7613_5524 PF10415 Fumarase C C-terminus BEST7613_5524 PF00206 Lyase BEST7613_5525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEST7613_5527 PF00111 2Fe-2S iron-sulfur cluster binding domain BEST7613_5528 PF02684 Lipid-A-disaccharide synthetase BEST7613_5530 PF02308 MgtC family BEST7613_5533 PF00101 Ribulose bisphosphate carboxylase, small chain BEST7613_5535 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BEST7613_5535 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BEST7613_5536 PF03572 Peptidase family S41 BEST7613_5536 PF00595 PDZ domain BEST7613_5541 PF00202 Aminotransferase class-III BEST7613_5542 PF01116 Fructose-bisphosphate aldolase class-II BEST7613_5543 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BEST7613_5543 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BEST7613_5543 PF13288 DXP reductoisomerase C-terminal domain BEST7613_5544 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_5544 PF07724 AAA domain (Cdc48 subfamily) BEST7613_5544 PF17871 AAA lid domain BEST7613_5544 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_5544 PF02861 Clp amino terminal domain, pathogenicity island component BEST7613_5553 PF03129 Anticodon binding domain BEST7613_5553 PF13393 Histidyl-tRNA synthetase BEST7613_5554 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5557 PF07827 KNTase C-terminal domain BEST7613_5558 PF01165 Ribosomal protein S21 BEST7613_5559 PF00005 ABC transporter BEST7613_5562 PF01609 Transposase DDE domain BEST7613_5564 PF01609 Transposase DDE domain BEST7613_5569 PF02401 LytB protein BEST7613_5574 PF01300 Telomere recombination BEST7613_5574 PF17788 HypF Kae1-like domain BEST7613_5574 PF07503 HypF finger BEST7613_5574 PF00708 Acylphosphatase BEST7613_5575 PF00035 Double-stranded RNA binding motif BEST7613_5575 PF14622 Ribonuclease-III-like BEST7613_5579 PF00032 Cytochrome b(C-terminal)/b6/petD BEST7613_5580 PF00033 Cytochrome b/b6/petB BEST7613_5583 PF01594 AI-2E family transporter BEST7613_5584 PF00121 Triosephosphate isomerase BEST7613_5586 PF07689 KaiB domain BEST7613_5586 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5587 PF01593 Flavin containing amine oxidoreductase BEST7613_5589 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEST7613_5589 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEST7613_5591 PF02033 Ribosome-binding factor A BEST7613_5592 PF00578 AhpC/TSA family BEST7613_5592 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEST7613_5594 PF03477 ATP cone domain BEST7613_5595 PF01405 Photosystem II reaction centre T protein BEST7613_5597 PF00156 Phosphoribosyl transferase domain BEST7613_5599 PF00005 ABC transporter BEST7613_5603 PF00005 ABC transporter BEST7613_5603 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEST7613_5606 PF04002 RadC-like JAB domain BEST7613_5607 PF01632 Ribosomal protein L35 BEST7613_5608 PF00453 Ribosomal protein L20 BEST7613_5609 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BEST7613_5609 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_5610 PF07549 SecD/SecF GG Motif BEST7613_5610 PF02355 Protein export membrane protein BEST7613_5611 PF07549 SecD/SecF GG Motif BEST7613_5611 PF02355 Protein export membrane protein BEST7613_5612 PF00083 Sugar (and other) transporter BEST7613_5613 PF04966 Carbohydrate-selective porin, OprB family BEST7613_5615 PF08369 Proto-chlorophyllide reductase 57 kD subunit BEST7613_5615 PF00148 Nitrogenase component 1 type Oxidoreductase BEST7613_5618 PF01476 LysM domain BEST7613_5618 PF03734 L,D-transpeptidase catalytic domain BEST7613_5619 PF00156 Phosphoribosyl transferase domain BEST7613_5620 PF00266 Aminotransferase class-V BEST7613_5624 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEST7613_5624 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BEST7613_5625 PF13439 Glycosyltransferase Family 4 BEST7613_5625 PF00534 Glycosyl transferases group 1 BEST7613_5628 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_5630 PF02223 Thymidylate kinase BEST7613_5631 PF01804 Penicillin amidase BEST7613_5634 PF01434 Peptidase family M41 BEST7613_5634 PF17862 AAA+ lid domain BEST7613_5634 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_5636 PF14403 Circularly permuted ATP-grasp type 2 BEST7613_5637 PF01039 Carboxyl transferase domain BEST7613_5637 PF17848 Acetyl-coA carboxylase zinc finger domain BEST7613_5638 PF00989 PAS fold BEST7613_5638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5638 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_5639 PF00171 Aldehyde dehydrogenase family BEST7613_5640 PF00873 AcrB/AcrD/AcrF family BEST7613_5643 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) BEST7613_5646 PF01479 S4 domain BEST7613_5646 PF00849 RNA pseudouridylate synthase BEST7613_5648 PF08448 PAS fold BEST7613_5648 PF08447 PAS fold BEST7613_5648 PF00563 EAL domain BEST7613_5648 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_5649 PF08502 LeuA allosteric (dimerisation) domain BEST7613_5649 PF00682 HMGL-like BEST7613_5650 PF01933 Uncharacterised protein family UPF0052 BEST7613_5654 PF00128 Alpha amylase, catalytic domain BEST7613_5654 PF02806 Alpha amylase, C-terminal all-beta domain BEST7613_5654 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEST7613_5657 PF02565 Recombination protein O C terminal BEST7613_5657 PF11967 Recombination protein O N terminal BEST7613_5660 PF01609 Transposase DDE domain BEST7613_5663 PF00400 WD domain, G-beta repeat BEST7613_5664 PF02602 Uroporphyrinogen-III synthase HemD BEST7613_5667 PF00226 DnaJ domain BEST7613_5667 PF01556 DnaJ C terminal domain BEST7613_5667 PF00684 DnaJ central domain BEST7613_5668 PF00012 Hsp70 protein BEST7613_5669 PF01571 Aminomethyltransferase folate-binding domain BEST7613_5669 PF08669 Glycine cleavage T-protein C-terminal barrel domain BEST7613_5676 PF02583 Metal-sensitive transcriptional repressor BEST7613_5678 PF00571 CBS domain BEST7613_5678 PF00478 IMP dehydrogenase / GMP reductase domain BEST7613_5688 PF00502 Phycobilisome protein BEST7613_5688 PF00427 Phycobilisome Linker polypeptide BEST7613_5693 PF00361 Proton-conducting membrane transporter BEST7613_5695 PF00196 Bacterial regulatory proteins, luxR family BEST7613_5695 PF00072 Response regulator receiver domain BEST7613_5699 PF00480 ROK family BEST7613_5700 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEST7613_5701 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5703 PF00677 Lumazine binding domain BEST7613_5706 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_5708 PF01627 Hpt domain BEST7613_5708 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_5708 PF02895 Signal transducing histidine kinase, homodimeric domain BEST7613_5708 PF07194 P2 response regulator binding domain BEST7613_5708 PF01584 CheW-like domain BEST7613_5709 PF07650 KH domain BEST7613_5709 PF01926 50S ribosome-binding GTPase BEST7613_5710 PF00140 Sigma-70 factor, region 1.2 BEST7613_5710 PF04542 Sigma-70 region 2 BEST7613_5710 PF04545 Sigma-70, region 4 BEST7613_5710 PF04539 Sigma-70 region 3 BEST7613_5712 PF08865 Domain of unknown function (DUF1830) BEST7613_5713 PF08323 Starch synthase catalytic domain BEST7613_5713 PF00534 Glycosyl transferases group 1 BEST7613_5715 PF03099 Biotin/lipoate A/B protein ligase family BEST7613_5716 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BEST7613_5716 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BEST7613_5717 PF01551 Peptidase family M23 BEST7613_5717 PF01476 LysM domain BEST7613_5717 PF08525 Opacity-associated protein A N-terminal motif BEST7613_5718 PF00588 SpoU rRNA Methylase family BEST7613_5719 PF04107 Glutamate-cysteine ligase family 2(GCS2) BEST7613_5720 PF01709 Transcriptional regulator BEST7613_5722 PF00403 Heavy-metal-associated domain BEST7613_5723 PF11780 Protein of unknown function (DUF3318) BEST7613_5724 PF02817 e3 binding domain BEST7613_5724 PF00364 Biotin-requiring enzyme BEST7613_5724 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEST7613_5727 PF01676 Metalloenzyme superfamily BEST7613_5727 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BEST7613_5729 PF00535 Glycosyl transferase family 2 BEST7613_5731 PF06745 KaiC BEST7613_5735 PF01435 Peptidase family M48 BEST7613_5736 PF01553 Acyltransferase BEST7613_5737 PF01008 Initiation factor 2 subunit family BEST7613_5738 PF00355 Rieske [2Fe-2S] domain BEST7613_5742 PF00334 Nucleoside diphosphate kinase BEST7613_5746 PF00676 Dehydrogenase E1 component BEST7613_5748 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BEST7613_5752 PF00561 alpha/beta hydrolase fold BEST7613_5754 PF08334 Type II secretion system (T2SS), protein G BEST7613_5754 PF07963 Prokaryotic N-terminal methylation motif BEST7613_5758 PF00654 Voltage gated chloride channel BEST7613_5760 PF00472 RF-1 domain BEST7613_5760 PF03462 PCRF domain BEST7613_5761 PF03186 CobD/Cbib protein BEST7613_5762 PF00144 Beta-lactamase BEST7613_5763 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus BEST7613_5763 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term BEST7613_5768 PF01048 Phosphorylase superfamily BEST7613_5769 PF05195 Aminopeptidase P, N-terminal domain BEST7613_5769 PF00557 Metallopeptidase family M24 BEST7613_5770 PF00574 Clp protease BEST7613_5771 PF00574 Clp protease BEST7613_5772 PF00482 Type II secretion system (T2SS), protein F BEST7613_5773 PF00482 Type II secretion system (T2SS), protein F BEST7613_5774 PF00437 Type II/IV secretion system protein BEST7613_5776 PF00873 AcrB/AcrD/AcrF family BEST7613_5778 PF02861 Clp amino terminal domain, pathogenicity island component BEST7613_5778 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_5778 PF17871 AAA lid domain BEST7613_5778 PF07724 AAA domain (Cdc48 subfamily) BEST7613_5778 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_5780 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BEST7613_5781 PF00696 Amino acid kinase family BEST7613_5782 PF01765 Ribosome recycling factor BEST7613_5783 PF02653 Branched-chain amino acid transport system / permease component BEST7613_5783 PF11862 Domain of unknown function (DUF3382) BEST7613_5787 PF03793 PASTA domain BEST7613_5787 PF00069 Protein kinase domain BEST7613_5789 PF00111 2Fe-2S iron-sulfur cluster binding domain BEST7613_5796 PF00400 WD domain, G-beta repeat BEST7613_5799 PF01209 ubiE/COQ5 methyltransferase family BEST7613_5800 PF01979 Amidohydrolase family BEST7613_5803 PF00892 EamA-like transporter family BEST7613_5804 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEST7613_5808 PF00543 Nitrogen regulatory protein P-II BEST7613_5809 PF01725 Ham1 family BEST7613_5811 PF01513 ATP-NAD kinase BEST7613_5812 PF05368 NmrA-like family BEST7613_5819 PF02272 DHHA1 domain BEST7613_5819 PF01411 tRNA synthetases class II (A) BEST7613_5819 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEST7613_5820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_5820 PF03466 LysR substrate binding domain BEST7613_5821 PF00162 Phosphoglycerate kinase BEST7613_5827 PF02347 Glycine cleavage system P-protein BEST7613_5828 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BEST7613_5831 PF14495 Cytochrome c-550 domain BEST7613_5833 PF12437 Glutamine synthetase type III N terminal BEST7613_5833 PF18318 Glutamine synthetase C-terminal domain BEST7613_5833 PF00120 Glutamine synthetase, catalytic domain BEST7613_5835 PF00886 Ribosomal protein S16 BEST7613_5836 PF00571 CBS domain BEST7613_5836 PF01595 Cyclin M transmembrane N-terminal domain BEST7613_5836 PF03471 Transporter associated domain BEST7613_5840 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BEST7613_5841 PF02080 TrkA-C domain BEST7613_5841 PF02254 TrkA-N domain BEST7613_5842 PF00487 Fatty acid desaturase BEST7613_5844 PF00355 Rieske [2Fe-2S] domain BEST7613_5847 PF00563 EAL domain BEST7613_5847 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_5847 PF03707 Bacterial signalling protein N terminal repeat BEST7613_5850 PF00270 DEAD/DEAH box helicase BEST7613_5850 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BEST7613_5850 PF18074 Primosomal protein N C-terminal domain BEST7613_5850 PF17764 3′ DNA-binding domain (3′BD) BEST7613_5850 PF00271 Helicase conserved C-terminal domain BEST7613_5852 PF01029 NusB family BEST7613_5854 PF00999 Sodium/hydrogen exchanger family BEST7613_5856 PF06745 KaiC BEST7613_5856 PF18073 Rubredoxin metal binding domain BEST7613_5858 PF09115 DNA polymerase III, delta subunit, C terminal BEST7613_5859 PF08241 Methyltransferase domain BEST7613_5861 PF00699 Urease beta subunit BEST7613_5863 PF00206 Lyase BEST7613_5863 PF10397 Adenylosuccinate lyase C-terminus BEST7613_5864 PF01112 Asparaginase BEST7613_5866 PF04055 Radical SAM superfamily BEST7613_5866 PF00919 Uncharacterized protein family UPF0004 BEST7613_5866 PF01938 TRAM domain BEST7613_5867 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEST7613_5870 PF01716 Manganese-stabilising protein / photosystem II polypeptide BEST7613_5871 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BEST7613_5877 PF13640 2OG-Fe(II) oxygenase superfamily BEST7613_5879 PF02463 RecF/RecN/SMC N terminal domain BEST7613_5880 PF00258 Flavodoxin BEST7613_5880 PF01613 Flavin reductase like domain BEST7613_5881 PF01066 CDP-alcohol phosphatidyltransferase BEST7613_5882 PF06206 CpeT/CpcT family (DUF1001) BEST7613_5883 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BEST7613_5884 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BEST7613_5885 PF03055 Retinal pigment epithelial membrane protein BEST7613_5886 PF03649 Uncharacterised protein family (UPF0014) BEST7613_5887 PF14622 Ribonuclease-III-like BEST7613_5887 PF00035 Double-stranded RNA binding motif BEST7613_5888 PF13326 Photosystem II Pbs27 BEST7613_5891 PF00175 Oxidoreductase NAD-binding domain BEST7613_5891 PF00970 Oxidoreductase FAD-binding domain BEST7613_5891 PF01383 CpcD/allophycocyanin linker domain BEST7613_5892 PF00485 Phosphoribulokinase / Uridine kinase family BEST7613_5894 PF07724 AAA domain (Cdc48 subfamily) BEST7613_5894 PF17871 AAA lid domain BEST7613_5894 PF02861 Clp amino terminal domain, pathogenicity island component BEST7613_5894 PF10431 C-terminal, D2-small domain, of ClpB protein BEST7613_5894 PF00004 ATPase family associated with various cellular activities (AAA) BEST7613_5895 PF13847 Methyltransferase domain BEST7613_5895 PF10119 Predicted methyltransferase regulatory domain BEST7613_5897 PF13439 Glycosyltransferase Family 4 BEST7613_5897 PF00534 Glycosyl transferases group 1 BEST7613_5900 PF01668 SmpB protein BEST7613_5903 PF01609 Transposase DDE domain BEST7613_5904 PF01192 RNA polymerase Rpb6 BEST7613_5907 PF00437 Type II/IV secretion system protein BEST7613_5908 PF13439 Glycosyltransferase Family 4 BEST7613_5908 PF00534 Glycosyl transferases group 1 BEST7613_5909 PF02397 Bacterial sugar transferase BEST7613_5910 PF01479 S4 domain BEST7613_5910 PF00849 RNA pseudouridylate synthase BEST7613_5912 PF00581 Rhodanese-like domain BEST7613_5912 PF00899 ThiF family BEST7613_5913 PF01810 LysE type translocator BEST7613_5914 PF02152 Dihydroneopterin aldolase BEST7613_5915 PF09297 NADH pyrophosphatase zinc ribbon domain BEST7613_5915 PF00293 NUDIX domain BEST7613_5916 PF00933 Glycosyl hydrolase family 3 N terminal domain BEST7613_5916 PF01915 Glycosyl hydrolase family 3 C-terminal domain BEST7613_5918 PF10664 Cyanobacterial and plastid NDH-1 subunit M BEST7613_5919 PF00719 Inorganic pyrophosphatase BEST7613_5920 PF00535 Glycosyl transferase family 2 BEST7613_5921 PF02617 ATP-dependent Clp protease adaptor protein ClpS BEST7613_5922 PF03055 Retinal pigment epithelial membrane protein BEST7613_5925 PF02545 Maf-like protein BEST7613_5926 PF01406 tRNA synthetases class I (C) catalytic domain BEST7613_5926 PF09190 DALR domain BEST7613_5928 PF00588 SpoU rRNA Methylase family BEST7613_5928 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEST7613_5929 PF00636 Ribonuclease III domain BEST7613_5930 PF01740 STAS domain BEST7613_5931 PF05116 Sucrose-6F-phosphate phosphohydrolase BEST7613_5932 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BEST7613_5933 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BEST7613_5937 PF01728 FtsJ-like methyltransferase BEST7613_5937 PF01479 S4 domain BEST7613_5939 PF12848 ABC transporter BEST7613_5939 PF16326 ABC transporter C-terminal domain BEST7613_5939 PF00005 ABC transporter BEST7613_5942 PF00486 Transcriptional regulatory protein, C terminal BEST7613_5942 PF00072 Response regulator receiver domain BEST7613_5943 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEST7613_5944 PF03358 NADPH-dependent FMN reductase BEST7613_5945 PF01758 Sodium Bile acid symporter family BEST7613_5947 PF00274 Fructose-bisphosphate aldolase class-I BEST7613_5948 PF00248 Aldo/keto reductase family BEST7613_5950 PF01593 Flavin containing amine oxidoreductase BEST7613_5951 PF05193 Peptidase M16 inactive domain BEST7613_5951 PF00675 Insulinase (Peptidase family M16) BEST7613_5952 PF02570 Precorrin-8X methylmutase BEST7613_5953 PF08245 Mur ligase middle domain BEST7613_5953 PF08353 Domain of unknown function (DUF1727) BEST7613_5955 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BEST7613_5955 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BEST7613_5958 PF00311 Phosphoenolpyruvate carboxylase BEST7613_5959 PF00196 Bacterial regulatory proteins, luxR family BEST7613_5959 PF00072 Response regulator receiver domain BEST7613_5960 PF00069 Protein kinase domain BEST7613_5960 PF00805 Pentapeptide repeats (8 copies) BEST7613_5961 PF03483 B3/4 domain BEST7613_5961 PF01588 Putative tRNA binding domain BEST7613_5961 PF03147 Ferredoxin-fold anticodon binding domain BEST7613_5961 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BEST7613_5961 PF03484 tRNA synthetase B5 domain BEST7613_5963 PF00072 Response regulator receiver domain BEST7613_5963 PF14332 Domain of unknown function (DUF4388) BEST7613_5964 PF00360 Phytochrome region BEST7613_5964 PF00563 EAL domain BEST7613_5964 PF01590 GAF domain BEST7613_5964 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_5965 PF00795 Carbon-nitrogen hydrolase BEST7613_5965 PF02540 NAD synthase BEST7613_5967 PF06827 Zinc finger found in FPG and IleRS BEST7613_5967 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BEST7613_5967 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BEST7613_5968 PF02427 Photosystem I reaction centre subunit IV / PsaE BEST7613_5969 PF00072 Response regulator receiver domain BEST7613_5969 PF00486 Transcriptional regulatory protein, C terminal BEST7613_5970 PF01070 FMN-dependent dehydrogenase BEST7613_5971 PF02629 CoA binding domain BEST7613_5971 PF00549 CoA-ligase BEST7613_5972 PF00483 Nucleotidyl transferase BEST7613_5975 PF00498 FHA domain BEST7613_5975 PF03704 Bacterial transcriptional activator domain BEST7613_5975 PF00486 Transcriptional regulatory protein, C terminal BEST7613_5976 PF00266 Aminotransferase class-V BEST7613_5977 PF13546 DDE superfamily endonuclease BEST7613_5978 PF13546 DDE superfamily endonuclease BEST7613_5979 PF01609 Transposase DDE domain BEST7613_5980 PF13546 DDE superfamily endonuclease BEST7613_5982 PF00171 Aldehyde dehydrogenase family BEST7613_5988 PF00005 ABC transporter BEST7613_5988 PF08239 Bacterial SH3 domain BEST7613_5989 PF08502 LeuA allosteric (dimerisation) domain BEST7613_5989 PF00682 HMGL-like BEST7613_5990 PF01427 D-ala-D-ala dipeptidase BEST7613_5991 PF01016 Ribosomal L27 protein BEST7613_5992 PF00829 Ribosomal prokaryotic L21 protein BEST7613_5995 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BEST7613_5997 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEST7613_5997 PF00588 SpoU rRNA Methylase family BEST7613_5998 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEST7613_5998 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_6000 PF00982 Glycosyltransferase family 20 BEST7613_6001 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BEST7613_6001 PF01266 FAD dependent oxidoreductase BEST7613_6006 PF00474 Sodium:solute symporter family BEST7613_6009 PF00255 Glutathione peroxidase BEST7613_6013 PF00465 Iron-containing alcohol dehydrogenase BEST7613_6014 PF01494 FAD binding domain BEST7613_6018 PF00534 Glycosyl transferases group 1 BEST7613_6018 PF13439 Glycosyltransferase Family 4 BEST7613_6019 PF01747 ATP-sulfurylase BEST7613_6019 PF14306 PUA-like domain BEST7613_6020 PF03477 ATP cone domain BEST7613_6020 PF00317 Ribonucleotide reductase, all-alpha domain BEST7613_6020 PF02867 Ribonucleotide reductase, barrel domain BEST7613_6027 PF02502 Ribose/Galactose Isomerase BEST7613_6029 PF02844 Phosphoribosylglycinamide synthetase, N domain BEST7613_6029 PF02843 Phosphoribosylglycinamide synthetase, C domain BEST7613_6029 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BEST7613_6031 PF00164 Ribosomal protein S12/S23 BEST7613_6032 PF00177 Ribosomal protein S7p/S5e BEST7613_6033 PF00679 Elongation factor G C-terminus BEST7613_6033 PF14492 Elongation Factor G, domain II BEST7613_6033 PF03144 Elongation factor Tu domain 2 BEST7613_6033 PF00009 Elongation factor Tu GTP binding domain BEST7613_6033 PF03764 Elongation factor G, domain IV BEST7613_6034 PF00009 Elongation factor Tu GTP binding domain BEST7613_6034 PF03144 Elongation factor Tu domain 2 BEST7613_6034 PF03143 Elongation factor Tu C-terminal domain BEST7613_6035 PF00338 Ribosomal protein S10p/S20e BEST7613_6037 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BEST7613_6038 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_6040 PF00805 Pentapeptide repeats (8 copies) BEST7613_6041 PF02016 LD-carboxypeptidase N-terminal domain BEST7613_6041 PF17676 LD-carboxypeptidase C-terminal domain BEST7613_6043 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEST7613_6044 PF01256 Carbohydrate kinase BEST7613_6044 PF03853 YjeF-related protein N-terminus BEST7613_6045 PF00905 Penicillin binding protein transpeptidase domain BEST7613_6045 PF00912 Transglycosylase BEST7613_6046 PF02934 GatB/GatE catalytic domain BEST7613_6046 PF02637 GatB domain BEST7613_6049 PF00448 SRP54-type protein, GTPase domain BEST7613_6049 PF02881 SRP54-type protein, helical bundle domain BEST7613_6049 PF02978 Signal peptide binding domain BEST7613_6053 PF01243 Pyridoxamine 5'-phosphate oxidase BEST7613_6053 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BEST7613_6055 PF00487 Fatty acid desaturase BEST7613_6056 PF00158 Sigma-54 interaction domain BEST7613_6056 PF00072 Response regulator receiver domain BEST7613_6056 PF02954 Bacterial regulatory protein, Fis family BEST7613_6059 PF00117 Glutamine amidotransferase class-I BEST7613_6059 PF06418 CTP synthase N-terminus BEST7613_6060 PF00694 Aconitase C-terminal domain BEST7613_6063 PF01594 AI-2E family transporter BEST7613_6064 PF02517 CPBP intramembrane metalloprotease BEST7613_6065 PF11805 Protein of unknown function (DUF3326) BEST7613_6067 PF00144 Beta-lactamase BEST7613_6070 PF00563 EAL domain BEST7613_6070 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_6070 PF03707 Bacterial signalling protein N terminal repeat BEST7613_6073 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BEST7613_6074 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BEST7613_6075 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BEST7613_6076 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_6077 PF09179 TilS substrate binding domain BEST7613_6077 PF01171 PP-loop family BEST7613_6080 PF03958 Bacterial type II/III secretion system short domain BEST7613_6080 PF00263 Bacterial type II and III secretion system protein BEST7613_6085 PF04966 Carbohydrate-selective porin, OprB family BEST7613_6085 PF00395 S-layer homology domain BEST7613_6086 PF03808 Glycosyl transferase WecB/TagA/CpsF family BEST7613_6089 PF01098 Cell cycle protein BEST7613_6091 PF16861 Carbamoyltransferase C-terminus BEST7613_6091 PF02543 Carbamoyltransferase N-terminus BEST7613_6092 PF04997 RNA polymerase Rpb1, domain 1 BEST7613_6092 PF00623 RNA polymerase Rpb1, domain 2 BEST7613_6092 PF04983 RNA polymerase Rpb1, domain 3 BEST7613_6093 PF00005 ABC transporter BEST7613_6093 PF00664 ABC transporter transmembrane region BEST7613_6093 PF03412 Peptidase C39 family BEST7613_6095 PF00355 Rieske [2Fe-2S] domain BEST7613_6097 PF00483 Nucleotidyl transferase BEST7613_6097 PF01050 Mannose-6-phosphate isomerase BEST7613_6098 PF00325 Bacterial regulatory proteins, crp family BEST7613_6098 PF00027 Cyclic nucleotide-binding domain BEST7613_6103 PF00106 short chain dehydrogenase BEST7613_6107 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEST7613_6107 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEST7613_6110 PF00877 NlpC/P60 family BEST7613_6111 PF00111 2Fe-2S iron-sulfur cluster binding domain BEST7613_6112 PF00459 Inositol monophosphatase family BEST7613_6113 PF01556 DnaJ C terminal domain BEST7613_6113 PF00226 DnaJ domain BEST7613_6113 PF00684 DnaJ central domain BEST7613_6115 PF02096 60Kd inner membrane protein BEST7613_6117 PF00825 Ribonuclease P BEST7613_6118 PF00468 Ribosomal protein L34 BEST7613_6120 PF02570 Precorrin-8X methylmutase BEST7613_6122 PF00149 Calcineurin-like phosphoesterase BEST7613_6123 PF02529 Cytochrome B6-F complex subunit 5 BEST7613_6124 PF00582 Universal stress protein family BEST7613_6128 PF01300 Telomere recombination BEST7613_6128 PF03481 Putative GTP-binding controlling metal-binding BEST7613_6129 PF00124 Photosynthetic reaction centre protein BEST7613_6130 PF08275 DNA primase catalytic core, N-terminal domain BEST7613_6130 PF01807 CHC2 zinc finger BEST7613_6131 PF00575 S1 RNA binding domain BEST7613_6132 PF00355 Rieske [2Fe-2S] domain BEST7613_6133 PF00005 ABC transporter BEST7613_6133 PF09383 NIL domain BEST7613_6134 PF00672 HAMP domain BEST7613_6134 PF07228 Stage II sporulation protein E (SpoIIE) BEST7613_6135 PF00072 Response regulator receiver domain BEST7613_6135 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_6136 PF01627 Hpt domain BEST7613_6136 PF00672 HAMP domain BEST7613_6136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6136 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_6136 PF00072 Response regulator receiver domain BEST7613_6136 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEST7613_6137 PF03816 Cell envelope-related transcriptional attenuator domain BEST7613_6139 PF02915 Rubrerythrin BEST7613_6140 PF01126 Heme oxygenase BEST7613_6141 PF04055 Radical SAM superfamily BEST7613_6141 PF06969 HemN C-terminal domain BEST7613_6143 PF00425 chorismate binding enzyme BEST7613_6143 PF04715 Anthranilate synthase component I, N terminal region BEST7613_6144 PF02361 Cobalt transport protein BEST7613_6146 PF00005 ABC transporter BEST7613_6146 PF08402 TOBE domain BEST7613_6147 PF00072 Response regulator receiver domain BEST7613_6147 PF12452 Protein of unknown function (DUF3685) BEST7613_6148 PF01894 Uncharacterised protein family UPF0047 BEST7613_6151 PF01960 ArgJ family BEST7613_6153 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEST7613_6153 PF01926 50S ribosome-binding GTPase BEST7613_6158 PF00072 Response regulator receiver domain BEST7613_6158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6158 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEST7613_6158 PF01627 Hpt domain BEST7613_6158 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_6158 PF00672 HAMP domain BEST7613_6159 PF01435 Peptidase family M48 BEST7613_6162 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_6162 PF00989 PAS fold BEST7613_6162 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6163 PF02514 CobN/Magnesium Chelatase BEST7613_6167 PF00977 Histidine biosynthesis protein BEST7613_6169 PF00925 GTP cyclohydrolase II BEST7613_6169 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEST7613_6170 PF18032 Photoprotection regulator fluorescence recovery protein BEST7613_6171 PF09150 Orange carotenoid protein, N-terminal BEST7613_6171 PF02136 Nuclear transport factor 2 (NTF2) domain BEST7613_6172 PF00563 EAL domain BEST7613_6172 PF00498 FHA domain BEST7613_6172 PF00990 Diguanylate cyclase, GGDEF domain BEST7613_6173 PF03480 Bacterial extracellular solute-binding protein, family 7 BEST7613_6175 PF13546 DDE superfamily endonuclease BEST7613_6178 PF01815 Rop protein BEST7613_6180 PF07690 Major Facilitator Superfamily BEST7613_6181 PF07690 Major Facilitator Superfamily BEST7613_6184 PF06962 Putative rRNA methylase BEST7613_6185 PF10776 Protein of unknown function (DUF2600) BEST7613_6186 PF12146 Serine aminopeptidase, S33 BEST7613_6187 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_6188 PF00324 Amino acid permease BEST7613_6189 PF00733 Asparagine synthase BEST7613_6189 PF13537 Glutamine amidotransferase domain BEST7613_6190 PF02773 S-adenosylmethionine synthetase, C-terminal domain BEST7613_6190 PF00438 S-adenosylmethionine synthetase, N-terminal domain BEST7613_6190 PF02772 S-adenosylmethionine synthetase, central domain BEST7613_6191 PF01293 Phosphoenolpyruvate carboxykinase BEST7613_6192 PF10763 Protein of unknown function (DUF2584) BEST7613_6193 PF00326 Prolyl oligopeptidase family BEST7613_6195 PF00005 ABC transporter BEST7613_6196 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6197 PF00293 NUDIX domain BEST7613_6198 PF05105 Bacteriophage holin family BEST7613_6199 PF00210 Ferritin-like domain BEST7613_6201 PF13115 YtkA-like BEST7613_6202 PF02664 S-Ribosylhomocysteinase (LuxS) BEST7613_6203 PF01809 Putative membrane protein insertion efficiency factor BEST7613_6204 PF00484 Carbonic anhydrase BEST7613_6205 PF01197 Ribosomal protein L31 BEST7613_6206 PF01654 Cytochrome bd terminal oxidase subunit I BEST7613_6207 PF02322 Cytochrome bd terminal oxidase subunit II BEST7613_6208 PF07561 Domain of Unknown Function (DUF1540) BEST7613_6209 PF00950 ABC 3 transport family BEST7613_6210 PF00950 ABC 3 transport family BEST7613_6211 PF00005 ABC transporter BEST7613_6212 PF01297 Zinc-uptake complex component A periplasmic BEST7613_6213 PF13378 Enolase C-terminal domain-like BEST7613_6213 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEST7613_6214 PF13193 AMP-binding enzyme C-terminal domain BEST7613_6214 PF00501 AMP-binding enzyme BEST7613_6215 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_6216 PF00561 alpha/beta hydrolase fold BEST7613_6217 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_6217 PF16582 Middle domain of thiamine pyrophosphate BEST7613_6217 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_6218 PF00425 chorismate binding enzyme BEST7613_6219 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEST7613_6220 PF00483 Nucleotidyl transferase BEST7613_6221 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEST7613_6221 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEST7613_6221 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEST7613_6222 PF01370 NAD dependent epimerase/dehydratase family BEST7613_6223 PF00534 Glycosyl transferases group 1 BEST7613_6223 PF13439 Glycosyltransferase Family 4 BEST7613_6226 PF13439 Glycosyltransferase Family 4 BEST7613_6226 PF00534 Glycosyl transferases group 1 BEST7613_6227 PF01636 Phosphotransferase enzyme family BEST7613_6228 PF03073 TspO/MBR family BEST7613_6229 PF00343 Carbohydrate phosphorylase BEST7613_6230 PF08323 Starch synthase catalytic domain BEST7613_6230 PF00534 Glycosyl transferases group 1 BEST7613_6231 PF00483 Nucleotidyl transferase BEST7613_6232 PF00483 Nucleotidyl transferase BEST7613_6233 PF00128 Alpha amylase, catalytic domain BEST7613_6233 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BEST7613_6233 PF02806 Alpha amylase, C-terminal all-beta domain BEST7613_6234 PF09515 Thiamine transporter protein (Thia_YuaJ) BEST7613_6235 PF00583 Acetyltransferase (GNAT) family BEST7613_6236 PF15975 Flotillin BEST7613_6236 PF01145 SPFH domain / Band 7 family BEST7613_6238 PF12867 DinB superfamily BEST7613_6240 PF00465 Iron-containing alcohol dehydrogenase BEST7613_6243 PF17735 Biofilm surface layer A BEST7613_6244 PF02254 TrkA-N domain BEST7613_6244 PF02080 TrkA-C domain BEST7613_6245 PF02386 Cation transport protein BEST7613_6246 PF05360 yiaA/B two helix domain BEST7613_6247 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BEST7613_6247 PF13457 GW (Gly-Tryp) dipeptide domain BEST7613_6248 PF07690 Major Facilitator Superfamily BEST7613_6249 PF05995 Cysteine dioxygenase type I BEST7613_6250 PF02673 Bacitracin resistance protein BacA BEST7613_6251 PF01594 AI-2E family transporter BEST7613_6252 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_6252 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_6253 PF06134 L-rhamnose isomerase (RhaA) BEST7613_6254 PF05336 L-rhamnose mutarotase BEST7613_6255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEST7613_6255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_6256 PF00455 DeoR C terminal sensor domain BEST7613_6256 PF08220 DeoR-like helix-turn-helix domain BEST7613_6257 PF00596 Class II Aldolase and Adducin N-terminal domain BEST7613_6258 PF02743 Cache domain BEST7613_6258 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_6258 PF00672 HAMP domain BEST7613_6259 PF00672 HAMP domain BEST7613_6259 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_6259 PF02743 Cache domain BEST7613_6260 PF02743 Cache domain BEST7613_6260 PF00672 HAMP domain BEST7613_6260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_6261 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_6261 PF00672 HAMP domain BEST7613_6261 PF02743 Cache domain BEST7613_6264 PF01894 Uncharacterised protein family UPF0047 BEST7613_6265 PF00128 Alpha amylase, catalytic domain BEST7613_6265 PF16657 Maltogenic Amylase, C-terminal domain BEST7613_6266 PF01595 Cyclin M transmembrane N-terminal domain BEST7613_6266 PF03471 Transporter associated domain BEST7613_6266 PF00571 CBS domain BEST7613_6267 PF04298 Putative neutral zinc metallopeptidase BEST7613_6269 PF11458 Membrane-integrating protein Mistic BEST7613_6270 PF02254 TrkA-N domain BEST7613_6270 PF07885 Ion channel BEST7613_6271 PF08868 YugN-like family BEST7613_6273 PF00342 Phosphoglucose isomerase BEST7613_6274 PF00465 Iron-containing alcohol dehydrogenase BEST7613_6275 PF00465 Iron-containing alcohol dehydrogenase BEST7613_6276 PF04070 Domain of unknown function (DUF378) BEST7613_6277 PF00575 S1 RNA binding domain BEST7613_6278 PF00155 Aminotransferase class I and II BEST7613_6279 PF01037 Lrp/AsnC ligand binding domain BEST7613_6280 PF00561 alpha/beta hydrolase fold BEST7613_6280 PF08386 TAP-like protein BEST7613_6281 PF08958 Domain of unknown function (DUF1871) BEST7613_6282 PF00155 Aminotransferase class I and II BEST7613_6283 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_6283 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6284 PF08810 Kinase associated protein B BEST7613_6285 PF00929 Exonuclease BEST7613_6287 PF07690 Major Facilitator Superfamily BEST7613_6288 PF00905 Penicillin binding protein transpeptidase domain BEST7613_6288 PF00912 Transglycosylase BEST7613_6289 PF04134 Protein of unknown function, DUF393 BEST7613_6290 PF17328 Family of unknown function (DUF5366) BEST7613_6291 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BEST7613_6291 PF17203 Single cache domain 3 BEST7613_6291 PF00989 PAS fold BEST7613_6291 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6292 PF00072 Response regulator receiver domain BEST7613_6297 PF03390 2-hydroxycarboxylate transporter family BEST7613_6299 PF00361 Proton-conducting membrane transporter BEST7613_6299 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEST7613_6299 PF13244 Domain of unknown function (DUF4040) BEST7613_6300 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BEST7613_6301 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEST7613_6302 PF00361 Proton-conducting membrane transporter BEST7613_6303 PF01899 Na+/H+ ion antiporter subunit BEST7613_6304 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BEST7613_6305 PF03334 Na+/H+ antiporter subunit BEST7613_6306 PF03061 Thioesterase superfamily BEST7613_6307 PF00196 Bacterial regulatory proteins, luxR family BEST7613_6307 PF00072 Response regulator receiver domain BEST7613_6308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6308 PF07730 Histidine kinase BEST7613_6311 PF00348 Polyprenyl synthetase BEST7613_6312 PF08181 DegQ (SacQ) family BEST7613_6314 PF08668 HDOD domain BEST7613_6314 PF00563 EAL domain BEST7613_6315 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BEST7613_6315 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BEST7613_6315 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BEST7613_6316 PF00857 Isochorismatase family BEST7613_6317 PF07997 Protein of unknown function (DUF1694) BEST7613_6318 PF14166 YueH-like protein BEST7613_6319 PF10676 Spore germination protein gerPA/gerPF BEST7613_6320 PF01594 AI-2E family transporter BEST7613_6321 PF10049 Protein of unknown function (DUF2283) BEST7613_6322 PF10842 Protein of unknown function (DUF2642) BEST7613_6323 PF01966 HD domain BEST7613_6324 PF00106 short chain dehydrogenase BEST7613_6325 PF17355 Family of unknown function (DUF5383) BEST7613_6327 PF12538 DNA transporter BEST7613_6327 PF01580 FtsK/SpoIIIE family BEST7613_6328 PF10140 WXG100 protein secretion system (Wss), protein YukC BEST7613_6329 PF08817 WXG100 protein secretion system (Wss), protein YukD BEST7613_6330 PF06013 Proteins of 100 residues with WXG BEST7613_6331 PF17853 GGDEF-like domain BEST7613_6331 PF13556 PucR C-terminal helix-turn-helix domain BEST7613_6331 PF06018 CodY GAF-like domain BEST7613_6332 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEST7613_6332 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BEST7613_6333 PF10042 Uncharacterized conserved protein (DUF2278) BEST7613_6334 PF03621 MbtH-like protein BEST7613_6335 PF00501 AMP-binding enzyme BEST7613_6335 PF13193 AMP-binding enzyme C-terminal domain BEST7613_6335 PF00668 Condensation domain BEST7613_6335 PF00550 Phosphopantetheine attachment site BEST7613_6335 PF00975 Thioesterase domain BEST7613_6336 PF00857 Isochorismatase family BEST7613_6336 PF00550 Phosphopantetheine attachment site BEST7613_6337 PF13193 AMP-binding enzyme C-terminal domain BEST7613_6337 PF00501 AMP-binding enzyme BEST7613_6338 PF00425 chorismate binding enzyme BEST7613_6339 PF00106 short chain dehydrogenase BEST7613_6340 PF00756 Putative esterase BEST7613_6341 PF00174 Oxidoreductase molybdopterin binding domain BEST7613_6342 PF02632 BioY family BEST7613_6343 PF03553 Na+/H+ antiporter family BEST7613_6343 PF13726 Na+-H+ antiporter family BEST7613_6344 PF02789 Cytosol aminopeptidase family, N-terminal domain BEST7613_6344 PF00883 Cytosol aminopeptidase family, catalytic domain BEST7613_6345 PF02681 Divergent PAP2 family BEST7613_6346 PF06725 3D domain BEST7613_6347 PF14068 Putative membrane protein BEST7613_6348 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_6349 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_6351 PF00478 IMP dehydrogenase / GMP reductase domain BEST7613_6352 PF04299 Putative FMN-binding domain BEST7613_6353 PF00583 Acetyltransferase (GNAT) family BEST7613_6354 PF01521 Iron-sulphur cluster biosynthesis BEST7613_6355 PF01678 Diaminopimelate epimerase BEST7613_6356 PF01773 Na+ dependent nucleoside transporter N-terminus BEST7613_6356 PF07662 Na+ dependent nucleoside transporter C-terminus BEST7613_6357 PF07293 Protein of unknown function (DUF1450) BEST7613_6358 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_6359 PF07315 Protein of unknown function (DUF1462) BEST7613_6360 PF01106 NifU-like domain BEST7613_6361 PF00326 Prolyl oligopeptidase family BEST7613_6361 PF07676 WD40-like Beta Propeller Repeat BEST7613_6362 PF00288 GHMP kinases N terminal domain BEST7613_6362 PF08544 GHMP kinases C terminal BEST7613_6363 PF00291 Pyridoxal-phosphate dependent enzyme BEST7613_6364 PF01842 ACT domain BEST7613_6364 PF03447 Homoserine dehydrogenase, NAD binding domain BEST7613_6364 PF00742 Homoserine dehydrogenase BEST7613_6366 PF04608 Phosphatidylglycerophosphatase A BEST7613_6367 PF13344 Haloacid dehalogenase-like hydrolase BEST7613_6368 PF01934 Protein of unknown function DUF86 BEST7613_6369 PF06265 Protein of unknown function (DUF1027) BEST7613_6370 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BEST7613_6371 PF04055 Radical SAM superfamily BEST7613_6371 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BEST7613_6372 PF01551 Peptidase family M23 BEST7613_6373 PF09560 Sporulation protein YunB (Spo_YunB) BEST7613_6374 PF08827 Domain of unknown function (DUF1805) BEST7613_6375 PF02872 5'-nucleotidase, C-terminal domain BEST7613_6376 PF01925 Sulfite exporter TauE/SafE BEST7613_6377 PF01904 Protein of unknown function DUF72 BEST7613_6379 PF01979 Amidohydrolase family BEST7613_6380 PF07905 Purine catabolism regulatory protein-like family BEST7613_6380 PF13556 PucR C-terminal helix-turn-helix domain BEST7613_6380 PF17853 GGDEF-like domain BEST7613_6381 PF00860 Permease family BEST7613_6382 PF00860 Permease family BEST7613_6383 PF01014 Uricase BEST7613_6383 PF09349 OHCU decarboxylase BEST7613_6384 PF00576 HIUase/Transthyretin family BEST7613_6385 PF09680 Family of unknown function BEST7613_6386 PF01799 [2Fe-2S] binding domain BEST7613_6386 PF00111 2Fe-2S iron-sulfur cluster binding domain BEST7613_6387 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BEST7613_6387 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BEST7613_6388 PF00941 FAD binding domain in molybdopterin dehydrogenase BEST7613_6389 PF12804 MobA-like NTP transferase domain BEST7613_6390 PF02625 XdhC and CoxI family BEST7613_6390 PF13478 XdhC Rossmann domain BEST7613_6391 PF00266 Aminotransferase class-V BEST7613_6392 PF01546 Peptidase family M20/M25/M40 BEST7613_6393 PF04231 Endonuclease I BEST7613_6394 PF17912 MalK OB fold domain BEST7613_6394 PF03459 TOBE domain BEST7613_6394 PF00005 ABC transporter BEST7613_6395 PF00392 Bacterial regulatory proteins, gntR family BEST7613_6395 PF07702 UTRA domain BEST7613_6396 PF00294 pfkB family carbohydrate kinase BEST7613_6397 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6398 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6399 PF01547 Bacterial extracellular solute-binding protein BEST7613_6400 PF01380 SIS domain BEST7613_6401 PF01541 GIY-YIG catalytic domain BEST7613_6402 PF01266 FAD dependent oxidoreductase BEST7613_6405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_6407 PF01458 Uncharacterized protein family (UPF0051) BEST7613_6408 PF01592 NifU-like N terminal domain BEST7613_6409 PF00266 Aminotransferase class-V BEST7613_6410 PF01458 Uncharacterized protein family (UPF0051) BEST7613_6411 PF00005 ABC transporter BEST7613_6413 PF02627 Carboxymuconolactone decarboxylase family BEST7613_6414 PF03180 NLPA lipoprotein BEST7613_6415 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6416 PF00005 ABC transporter BEST7613_6416 PF09383 NIL domain BEST7613_6417 PF02036 SCP-2 sterol transfer family BEST7613_6418 PF00085 Thioredoxin BEST7613_6419 PF01751 Toprim domain BEST7613_6420 PF10830 Protein of unknown function (DUF2553) BEST7613_6421 PF01597 Glycine cleavage H-protein BEST7613_6422 PF03960 ArsC family BEST7613_6423 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEST7613_6423 PF02770 Acyl-CoA dehydrogenase, middle domain BEST7613_6423 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEST7613_6424 PF02803 Thiolase, C-terminal domain BEST7613_6424 PF00108 Thiolase, N-terminal domain BEST7613_6425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEST7613_6425 PF00378 Enoyl-CoA hydratase/isomerase BEST7613_6425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEST7613_6426 PF14115 YuzL-like protein BEST7613_6427 PF01619 Proline dehydrogenase BEST7613_6429 PF07875 Coat F domain BEST7613_6430 PF01047 MarR family BEST7613_6431 PF07690 Major Facilitator Superfamily BEST7613_6432 PF14552 Tautomerase enzyme BEST7613_6434 PF00106 short chain dehydrogenase BEST7613_6435 PF03466 LysR substrate binding domain BEST7613_6435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_6436 PF10835 Protein of unknown function (DUF2573) BEST7613_6437 PF00005 ABC transporter BEST7613_6438 PF14039 YusW-like protein BEST7613_6441 PF00106 short chain dehydrogenase BEST7613_6442 PF00210 Ferritin-like domain BEST7613_6443 PF13180 PDZ domain BEST7613_6444 PF00486 Transcriptional regulatory protein, C terminal BEST7613_6444 PF00072 Response regulator receiver domain BEST7613_6445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6445 PF00672 HAMP domain BEST7613_6445 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_6447 PF00440 Bacterial regulatory proteins, tetR family BEST7613_6448 PF10415 Fumarase C C-terminus BEST7613_6448 PF00206 Lyase BEST7613_6449 PF13113 Protein of unknown function (DUF3970) BEST7613_6450 PF03323 Bacillus/Clostridium GerA spore germination protein BEST7613_6451 PF03845 Spore germination protein BEST7613_6452 PF05504 Spore germination B3/ GerAC like, C-terminal BEST7613_6453 PF00072 Response regulator receiver domain BEST7613_6453 PF00196 Bacterial regulatory proteins, luxR family BEST7613_6454 PF07730 Histidine kinase BEST7613_6454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6454 PF00672 HAMP domain BEST7613_6455 PF09922 Cell wall-active antibiotics response 4TMS YvqF BEST7613_6456 PF13349 Putative adhesin BEST7613_6457 PF04012 PspA/IM30 family BEST7613_6459 PF07690 Major Facilitator Superfamily BEST7613_6460 PF01923 Cobalamin adenosyltransferase BEST7613_6461 PF00005 ABC transporter BEST7613_6462 PF01032 FecCD transport family BEST7613_6463 PF01497 Periplasmic binding protein BEST7613_6464 PF00106 short chain dehydrogenase BEST7613_6465 PF08450 SMP-30/Gluconolactonase/LRE-like region BEST7613_6466 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_6466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6467 PF00486 Transcriptional regulatory protein, C terminal BEST7613_6467 PF00072 Response regulator receiver domain BEST7613_6469 PF04545 Sigma-70, region 4 BEST7613_6470 PF12841 YvrJ protein family BEST7613_6471 PF00190 Cupin BEST7613_6472 PF14184 Regulatory protein YrvL BEST7613_6473 PF12704 MacB-like periplasmic core domain BEST7613_6473 PF02687 FtsX-like permease family BEST7613_6474 PF00005 ABC transporter BEST7613_6475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEST7613_6476 PF00005 ABC transporter BEST7613_6477 PF01032 FecCD transport family BEST7613_6478 PF01032 FecCD transport family BEST7613_6479 PF01497 Periplasmic binding protein BEST7613_6480 PF13520 Amino acid permease BEST7613_6481 PF09575 Small spore protein J (Spore_SspJ) BEST7613_6482 PF04307 LexA-binding, inner membrane-associated putative hydrolase BEST7613_6483 PF00884 Sulfatase BEST7613_6484 PF12727 PBP superfamily domain BEST7613_6484 PF12728 Helix-turn-helix domain BEST7613_6486 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6487 PF00248 Aldo/keto reductase family BEST7613_6489 PF00999 Sodium/hydrogen exchanger family BEST7613_6490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEST7613_6490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEST7613_6491 PF00258 Flavodoxin BEST7613_6491 PF00175 Oxidoreductase NAD-binding domain BEST7613_6491 PF00667 FAD binding domain BEST7613_6492 PF13538 UvrD-like helicase C-terminal domain BEST7613_6493 PF03458 UPF0126 domain BEST7613_6494 PF02600 Disulfide bond formation protein DsbB BEST7613_6495 PF13462 Thioredoxin BEST7613_6496 PF00403 Heavy-metal-associated domain BEST7613_6497 PF00403 Heavy-metal-associated domain BEST7613_6498 PF00403 Heavy-metal-associated domain BEST7613_6499 PF02583 Metal-sensitive transcriptional repressor BEST7613_6500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_6500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_6501 PF02525 Flavodoxin-like fold BEST7613_6503 PF17314 Family of unknown function (DUF5360) BEST7613_6504 PF00893 Small Multidrug Resistance protein BEST7613_6505 PF00440 Bacterial regulatory proteins, tetR family BEST7613_6506 PF00106 short chain dehydrogenase BEST7613_6507 PF01668 SmpB protein BEST7613_6508 PF00773 RNB domain BEST7613_6508 PF17876 Cold shock domain BEST7613_6508 PF00575 S1 RNA binding domain BEST7613_6508 PF08206 Ribonuclease B OB domain BEST7613_6509 PF12146 Serine aminopeptidase, S33 BEST7613_6510 PF03840 Preprotein translocase SecG subunit BEST7613_6511 PF00561 alpha/beta hydrolase fold BEST7613_6512 PF01381 Helix-turn-helix BEST7613_6515 PF01638 HxlR-like helix-turn-helix BEST7613_6516 PF00672 HAMP domain BEST7613_6516 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEST7613_6516 PF12729 Four helix bundle sensory module for signal transduction BEST7613_6517 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6518 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BEST7613_6519 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6520 PF00005 ABC transporter BEST7613_6520 PF00571 CBS domain BEST7613_6521 PF12802 MarR family BEST7613_6522 PF17418 Sporulation delaying protein SdpA BEST7613_6523 PF05090 Vitamin K-dependent gamma-carboxylase BEST7613_6525 PF07853 Protein of unknown function (DUF1648) BEST7613_6525 PF13630 SdpI/YhfL protein family BEST7613_6526 PF01022 Bacterial regulatory protein, arsR family BEST7613_6527 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6528 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BEST7613_6529 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6530 PF00005 ABC transporter BEST7613_6530 PF00571 CBS domain BEST7613_6531 PF12802 MarR family BEST7613_6532 PF01914 MarC family integral membrane protein BEST7613_6533 PF11724 YvbH-like oligomerisation region BEST7613_6533 PF08000 Bacterial PH domain BEST7613_6535 PF13240 zinc-ribbon domain BEST7613_6536 PF00583 Acetyltransferase (GNAT) family BEST7613_6537 PF00113 Enolase, C-terminal TIM barrel domain BEST7613_6537 PF03952 Enolase, N-terminal domain BEST7613_6538 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BEST7613_6538 PF01676 Metalloenzyme superfamily BEST7613_6539 PF00121 Triosephosphate isomerase BEST7613_6540 PF00162 Phosphoglycerate kinase BEST7613_6541 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEST7613_6541 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEST7613_6542 PF04198 Putative sugar-binding domain BEST7613_6543 PF00083 Sugar (and other) transporter BEST7613_6544 PF00392 Bacterial regulatory proteins, gntR family BEST7613_6545 PF00296 Luciferase-like monooxygenase BEST7613_6546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_6546 PF03466 LysR substrate binding domain BEST7613_6547 PF00892 EamA-like transporter family BEST7613_6548 PF00324 Amino acid permease BEST7613_6549 PF00704 Glycosyl hydrolases family 18 BEST7613_6550 PF02589 LUD domain BEST7613_6551 PF02589 LUD domain BEST7613_6551 PF13183 4Fe-4S dicluster domain BEST7613_6551 PF11870 Domain of unknown function (DUF3390) BEST7613_6552 PF02754 Cysteine-rich domain BEST7613_6553 PF00072 Response regulator receiver domain BEST7613_6553 PF00196 Bacterial regulatory proteins, luxR family BEST7613_6554 PF07730 Histidine kinase BEST7613_6554 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6556 PF00005 ABC transporter BEST7613_6557 PF12697 Alpha/beta hydrolase family BEST7613_6558 PF13426 PAS domain BEST7613_6558 PF07228 Stage II sporulation protein E (SpoIIE) BEST7613_6559 PF07745 Glycosyl hydrolase family 53 BEST7613_6560 PF08533 Beta-galactosidase C-terminal domain BEST7613_6560 PF08532 Beta-galactosidase trimerisation domain BEST7613_6560 PF02449 Beta-galactosidase BEST7613_6561 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6562 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6563 PF13416 Bacterial extracellular solute-binding protein BEST7613_6564 PF00356 Bacterial regulatory proteins, lacI family BEST7613_6565 PF00392 Bacterial regulatory proteins, gntR family BEST7613_6565 PF07729 FCD domain BEST7613_6566 PF02652 L-lactate permease BEST7613_6567 PF04963 Sigma-54 factor, core binding domain BEST7613_6567 PF00309 Sigma-54 factor, Activator interacting domain (AID) BEST7613_6567 PF04552 Sigma-54, DNA binding domain BEST7613_6568 PF09628 YvfG protein BEST7613_6569 PF04230 Polysaccharide pyruvyl transferase BEST7613_6570 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEST7613_6571 PF00132 Bacterial transferase hexapeptide (six repeats) BEST7613_6571 PF17836 PglD N-terminal domain BEST7613_6572 PF02397 Bacterial sugar transferase BEST7613_6573 PF00302 Chloramphenicol acetyltransferase BEST7613_6575 PF07827 KNTase C-terminal domain BEST7613_6576 PF00534 Glycosyl transferases group 1 BEST7613_6576 PF13439 Glycosyltransferase Family 4 BEST7613_6577 PF00535 Glycosyl transferase family 2 BEST7613_6578 PF00534 Glycosyl transferases group 1 BEST7613_6578 PF13439 Glycosyltransferase Family 4 BEST7613_6579 PF02719 Polysaccharide biosynthesis protein BEST7613_6580 PF13614 AAA domain BEST7613_6581 PF02706 Chain length determinant protein BEST7613_6582 PF08671 Anti-repressor SinI BEST7613_6582 PF01381 Helix-turn-helix BEST7613_6583 PF00135 Carboxylesterase family BEST7613_6585 PF05870 Phenolic acid decarboxylase (PAD) BEST7613_6587 PF01177 Asp/Glu/Hydantoin racemase BEST7613_6588 PF11954 Domain of unknown function (DUF3471) BEST7613_6588 PF00144 Beta-lactamase BEST7613_6589 PF02435 Levansucrase/Invertase BEST7613_6590 PF00251 Glycosyl hydrolases family 32 N-terminal domain BEST7613_6590 PF08244 Glycosyl hydrolases family 32 C terminal BEST7613_6591 PF13520 Amino acid permease BEST7613_6592 PF17934 Tetracyclin repressor-like, C-terminal domain BEST7613_6592 PF00440 Bacterial regulatory proteins, tetR family BEST7613_6593 PF00893 Small Multidrug Resistance protein BEST7613_6594 PF00893 Small Multidrug Resistance protein BEST7613_6595 PF11553 Protein of unknown function (DUF3231) BEST7613_6596 PF08031 Berberine and berberine like BEST7613_6596 PF01565 FAD binding domain BEST7613_6597 PF01734 Patatin-like phospholipase BEST7613_6598 PF00574 Clp protease BEST7613_6599 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_6600 PF00128 Alpha amylase, catalytic domain BEST7613_6600 PF16657 Maltogenic Amylase, C-terminal domain BEST7613_6601 PF03633 Glycosyl hydrolase family 65, C-terminal domain BEST7613_6601 PF03636 Glycosyl hydrolase family 65, N-terminal domain BEST7613_6601 PF03632 Glycosyl hydrolase family 65 central catalytic domain BEST7613_6602 PF06691 Protein of unknown function (DUF1189) BEST7613_6603 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6604 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_6605 PF13416 Bacterial extracellular solute-binding protein BEST7613_6606 PF00128 Alpha amylase, catalytic domain BEST7613_6606 PF02903 Alpha amylase, N-terminal ig-like domain BEST7613_6607 PF00356 Bacterial regulatory proteins, lacI family BEST7613_6608 PF03641 Possible lysine decarboxylase BEST7613_6609 PF03819 MazG nucleotide pyrophosphohydrolase domain BEST7613_6610 PF01740 STAS domain BEST7613_6610 PF00916 Sulfate permease family BEST7613_6611 PF00484 Carbonic anhydrase BEST7613_6612 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEST7613_6612 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEST7613_6613 PF02687 FtsX-like permease family BEST7613_6614 PF00005 ABC transporter BEST7613_6615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6616 PF00072 Response regulator receiver domain BEST7613_6616 PF00486 Transcriptional regulatory protein, C terminal BEST7613_6618 PF00797 N-acetyltransferase BEST7613_6619 PF00381 PTS HPr component phosphorylation site BEST7613_6620 PF10298 WhiA N-terminal LAGLIDADG-like domain BEST7613_6620 PF14527 WhiA LAGLIDADG-like domain BEST7613_6620 PF02650 WhiA C-terminal HTH domain BEST7613_6621 PF01933 Uncharacterised protein family UPF0052 BEST7613_6622 PF03668 P-loop ATPase protein family BEST7613_6623 PF00293 NUDIX domain BEST7613_6624 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_6625 PF00877 NlpC/P60 family BEST7613_6627 PF00664 ABC transporter transmembrane region BEST7613_6627 PF00005 ABC transporter BEST7613_6631 PF01502 Phosphoribosyl-AMP cyclohydrolase BEST7613_6631 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BEST7613_6632 PF00977 Histidine biosynthesis protein BEST7613_6633 PF00977 Histidine biosynthesis protein BEST7613_6634 PF00117 Glutamine amidotransferase class-I BEST7613_6635 PF00475 Imidazoleglycerol-phosphate dehydratase BEST7613_6636 PF00815 Histidinol dehydrogenase BEST7613_6637 PF01634 ATP phosphoribosyltransferase BEST7613_6638 PF13393 Histidyl-tRNA synthetase BEST7613_6639 PF13529 Peptidase_C39 like family BEST7613_6640 PF03211 Pectate lyase BEST7613_6641 PF14602 Hexapeptide repeat of succinyl-transferase BEST7613_6642 PF13419 Haloacid dehalogenase-like hydrolase BEST7613_6643 PF07670 Nucleoside recognition BEST7613_6644 PF01790 Prolipoprotein diacylglyceryl transferase BEST7613_6645 PF02603 HPr Serine kinase N terminus BEST7613_6645 PF07475 HPr Serine kinase C-terminal domain BEST7613_6646 PF01979 Amidohydrolase family BEST7613_6647 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BEST7613_6649 PF00149 Calcineurin-like phosphoesterase BEST7613_6650 PF01047 MarR family BEST7613_6651 PF00067 Cytochrome P450 BEST7613_6652 PF16715 Cyclodipeptide synthase BEST7613_6653 PF01047 MarR family BEST7613_6654 PF07690 Major Facilitator Superfamily BEST7613_6655 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BEST7613_6656 PF04024 PspC domain BEST7613_6657 PF13349 Putative adhesin BEST7613_6660 PF00700 Bacterial flagellin C-terminal helical region BEST7613_6661 PF17760 UvrA interaction domain BEST7613_6661 PF17755 UvrA DNA-binding domain BEST7613_6661 PF00005 ABC transporter BEST7613_6662 PF00271 Helicase conserved C-terminal domain BEST7613_6662 PF17757 UvrB interaction domain BEST7613_6662 PF12344 Ultra-violet resistance protein B BEST7613_6662 PF02151 UvrB/uvrC motif BEST7613_6662 PF04851 Type III restriction enzyme, res subunit BEST7613_6663 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) BEST7613_6664 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BEST7613_6664 PF00391 PEP-utilising enzyme, mobile domain BEST7613_6665 PF00440 Bacterial regulatory proteins, tetR family BEST7613_6666 PF07690 Major Facilitator Superfamily BEST7613_6667 PF17820 PDZ domain BEST7613_6668 PF17423 Swarming motility protein BEST7613_6669 PF17820 PDZ domain BEST7613_6669 PF03572 Peptidase family S41 BEST7613_6669 PF01471 Putative peptidoglycan binding domain BEST7613_6670 PF02687 FtsX-like permease family BEST7613_6670 PF18075 FtsX extracellular domain BEST7613_6671 PF00005 ABC transporter BEST7613_6672 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BEST7613_6673 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BEST7613_6673 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BEST7613_6674 PF00472 RF-1 domain BEST7613_6674 PF03462 PCRF domain BEST7613_6675 PF07516 SecA Wing and Scaffold domain BEST7613_6675 PF01043 SecA preprotein cross-linking domain BEST7613_6675 PF07517 SecA DEAD-like domain BEST7613_6675 PF02810 SEC-C motif BEST7613_6676 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BEST7613_6676 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BEST7613_6679 PF02561 Flagellar protein FliS BEST7613_6680 PF02465 Flagellar hook-associated protein 2 N-terminus BEST7613_6680 PF07195 Flagellar hook-associated protein 2 C-terminus BEST7613_6680 PF07196 Flagellin hook IN motif BEST7613_6681 PF03646 FlaG protein BEST7613_6682 PF00669 Bacterial flagellin N-terminal helical region BEST7613_6682 PF00700 Bacterial flagellin C-terminal helical region BEST7613_6683 PF02599 Global regulator protein family BEST7613_6684 PF02623 FliW protein BEST7613_6686 PF00700 Bacterial flagellin C-terminal helical region BEST7613_6686 PF00669 Bacterial flagellin N-terminal helical region BEST7613_6687 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEST7613_6687 PF00460 Flagella basal body rod protein BEST7613_6688 PF05130 FlgN protein BEST7613_6689 PF04316 Anti-sigma-28 factor, FlgM BEST7613_6692 PF10719 Late competence development protein ComFB BEST7613_6693 PF00271 Helicase conserved C-terminal domain BEST7613_6693 PF04851 Type III restriction enzyme, res subunit BEST7613_6694 PF02645 Uncharacterised protein, DegV family COG1307 BEST7613_6695 PF00072 Response regulator receiver domain BEST7613_6695 PF00196 Bacterial regulatory proteins, luxR family BEST7613_6696 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6696 PF05384 Sensor protein DegS BEST7613_6696 PF07730 Histidine kinase BEST7613_6697 PF09186 Domain of unknown function (DUF1949) BEST7613_6697 PF01205 Uncharacterized protein family UPF0029 BEST7613_6698 PF03816 Cell envelope-related transcriptional attenuator domain BEST7613_6699 PF00953 Glycosyl transferase family 4 BEST7613_6701 PF00535 Glycosyl transferase family 2 BEST7613_6702 PF02706 Chain length determinant protein BEST7613_6703 PF04932 O-Antigen ligase BEST7613_6704 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEST7613_6704 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEST7613_6704 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEST7613_6705 PF00534 Glycosyl transferases group 1 BEST7613_6705 PF13439 Glycosyltransferase Family 4 BEST7613_6706 PF14667 Polysaccharide biosynthesis C-terminal domain BEST7613_6706 PF01943 Polysaccharide biosynthesis protein BEST7613_6707 PF02397 Bacterial sugar transferase BEST7613_6708 PF01520 N-acetylmuramoyl-L-alanine amidase BEST7613_6708 PF04122 Putative cell wall binding repeat 2 BEST7613_6709 PF08486 Stage II sporulation protein BEST7613_6709 PF04122 Putative cell wall binding repeat 2 BEST7613_6711 PF03816 Cell envelope-related transcriptional attenuator domain BEST7613_6712 PF02350 UDP-N-acetylglucosamine 2-epimerase BEST7613_6713 PF00483 Nucleotidyl transferase BEST7613_6714 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BEST7613_6714 PF00535 Glycosyl transferase family 2 BEST7613_6715 PF00535 Glycosyl transferase family 2 BEST7613_6717 PF00483 Nucleotidyl transferase BEST7613_6718 PF00005 ABC transporter BEST7613_6719 PF01061 ABC-2 type transporter BEST7613_6720 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BEST7613_6721 PF09318 Glycosyl transferase 1 domain A BEST7613_6721 PF00534 Glycosyl transferases group 1 BEST7613_6722 PF01467 Cytidylyltransferase-like BEST7613_6723 PF03808 Glycosyl transferase WecB/TagA/CpsF family BEST7613_6724 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BEST7613_6726 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BEST7613_6726 PF08239 Bacterial SH3 domain BEST7613_6726 PF05036 Sporulation related domain BEST7613_6727 PF01238 Phosphomannose isomerase type I BEST7613_6728 PF03323 Bacillus/Clostridium GerA spore germination protein BEST7613_6729 PF03845 Spore germination protein BEST7613_6730 PF05504 Spore germination B3/ GerAC like, C-terminal BEST7613_6731 PF00083 Sugar (and other) transporter BEST7613_6732 PF03816 Cell envelope-related transcriptional attenuator domain BEST7613_6734 PF00877 NlpC/P60 family BEST7613_6736 PF09587 Bacterial capsule synthesis protein PGA_cap BEST7613_6737 PF14102 Capsule biosynthesis CapC BEST7613_6738 PF08245 Mur ligase middle domain BEST7613_6739 PF00356 Bacterial regulatory proteins, lacI family BEST7613_6740 PF00294 pfkB family carbohydrate kinase BEST7613_6741 PF05025 RbsD / FucU transport protein family BEST7613_6742 PF00005 ABC transporter BEST7613_6743 PF02653 Branched-chain amino acid transport system / permease component BEST7613_6744 PF13407 Periplasmic binding protein domain BEST7613_6745 PF08239 Bacterial SH3 domain BEST7613_6746 PF13031 Protein of unknown function (DUF3892) BEST7613_6747 PF02525 Flavodoxin-like fold BEST7613_6748 PF03306 Alpha-acetolactate decarboxylase BEST7613_6749 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_6749 PF00205 Thiamine pyrophosphate enzyme, central domain BEST7613_6749 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_6750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_6750 PF03466 LysR substrate binding domain BEST7613_6751 PF02040 Arsenical pump membrane protein BEST7613_6754 PF08757 CotH kinase protein BEST7613_6756 PF01613 Flavin reductase like domain BEST7613_6757 PF13789 Domain of unknown function (DUF4181) BEST7613_6759 PF13404 AsnC-type helix-turn-helix domain BEST7613_6759 PF01037 Lrp/AsnC ligand binding domain BEST7613_6760 PF02417 Chromate transporter BEST7613_6761 PF02417 Chromate transporter BEST7613_6763 PF03358 NADPH-dependent FMN reductase BEST7613_6764 PF03466 LysR substrate binding domain BEST7613_6764 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_6765 PF04493 Endonuclease V BEST7613_6766 PF07661 MORN repeat variant BEST7613_6767 PF04740 LXG domain of WXG superfamily BEST7613_6767 PF14431 YwqJ-like deaminase BEST7613_6767 PF14449 Pre-toxin TG BEST7613_6769 PF16888 Domain of unknown function (DUF5082) BEST7613_6770 PF09234 Domain of unknown function (DUF1963) BEST7613_6771 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEST7613_6771 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEST7613_6771 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEST7613_6773 PF13614 AAA domain BEST7613_6774 PF13807 G-rich domain on putative tyrosine kinase BEST7613_6774 PF02706 Chain length determinant protein BEST7613_6776 PF04434 SWIM zinc finger BEST7613_6777 PF00176 SNF2 family N-terminal domain BEST7613_6777 PF12419 SNF2 Helicase protein BEST7613_6777 PF00271 Helicase conserved C-terminal domain BEST7613_6779 PF00455 DeoR C terminal sensor domain BEST7613_6779 PF08220 DeoR-like helix-turn-helix domain BEST7613_6780 PF00436 Single-strand binding protein family BEST7613_6782 PF14183 YwpF-like protein BEST7613_6783 PF04203 Sortase domain BEST7613_6785 PF06580 Histidine kinase BEST7613_6785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_6786 PF01741 Large-conductance mechanosensitive channel, MscL BEST7613_6787 PF07977 FabA-like domain BEST7613_6788 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_6789 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEST7613_6789 PF00460 Flagella basal body rod protein BEST7613_6790 PF00460 Flagella basal body rod protein BEST7613_6790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BEST7613_6792 PF12116 Stage III sporulation protein D BEST7613_6793 PF01047 MarR family BEST7613_6794 PF07690 Major Facilitator Superfamily BEST7613_6795 PF13229 Right handed beta helix region BEST7613_6796 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BEST7613_6797 PF07690 Major Facilitator Superfamily BEST7613_6798 PF00857 Isochorismatase family BEST7613_6800 PF00909 Ammonium Transporter Family BEST7613_6801 PF00543 Nitrogen regulatory protein P-II BEST7613_6802 PF01569 PAP2 superfamily BEST7613_6803 PF04892 VanZ like family BEST7613_6804 PF01551 Peptidase family M23 BEST7613_6805 PF00583 Acetyltransferase (GNAT) family BEST7613_6806 PF17319 Family of unknown function (DUF5362) BEST7613_6807 PF17370 Family of unknown function (DUF5392) BEST7613_6808 PF13091 PLD-like domain BEST7613_6808 PF13396 Phospholipase_D-nuclease N-terminal BEST7613_6809 PF07739 TipAS antibiotic-recognition domain BEST7613_6809 PF13411 MerR HTH family regulatory protein BEST7613_6810 PF17319 Family of unknown function (DUF5362) BEST7613_6811 PF13460 NAD(P)H-binding BEST7613_6812 PF02082 Transcriptional regulator BEST7613_6813 PF00449 Urease alpha-subunit, N-terminal domain BEST7613_6813 PF01979 Amidohydrolase family BEST7613_6814 PF00699 Urease beta subunit BEST7613_6815 PF00547 Urease, gamma subunit BEST7613_6818 PF05532 CsbD-like BEST7613_6820 PF17874 MalT-like TPR region BEST7613_6820 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_6821 PF04055 Radical SAM superfamily BEST7613_6821 PF06463 Molybdenum Cofactor Synthesis C BEST7613_6822 PF02634 FdhD/NarQ family BEST7613_6824 PF00092 von Willebrand factor type A domain BEST7613_6825 PF00092 von Willebrand factor type A domain BEST7613_6827 PF08486 Stage II sporulation protein BEST7613_6828 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEST7613_6829 PF08680 TATA-box binding BEST7613_6830 PF06612 Protein of unknown function (DUF1146) BEST7613_6832 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BEST7613_6832 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BEST7613_6833 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEST7613_6833 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEST7613_6834 PF00231 ATP synthase BEST7613_6835 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEST7613_6835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEST7613_6835 PF00306 ATP synthase alpha/beta chain, C terminal domain BEST7613_6836 PF00213 ATP synthase delta (OSCP) subunit BEST7613_6837 PF00430 ATP synthase B/B' CF(0) BEST7613_6838 PF00137 ATP synthase subunit C BEST7613_6839 PF00119 ATP synthase A chain BEST7613_6840 PF03899 ATP synthase I chain BEST7613_6842 PF00464 Serine hydroxymethyltransferase BEST7613_6843 PF04260 Protein of unknown function (DUF436) BEST7613_6844 PF02502 Ribose/Galactose Isomerase BEST7613_6845 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEST7613_6846 PF02659 Putative manganese efflux pump BEST7613_6847 PF03481 Putative GTP-binding controlling metal-binding BEST7613_6847 PF01300 Telomere recombination BEST7613_6849 PF09551 Stage II sporulation protein R (spore_II_R) BEST7613_6850 PF17094 Uncharacterised protein family (UPF0715) BEST7613_6851 PF17247 Family of unknown function (DUF5316) BEST7613_6852 PF05175 Methyltransferase small domain BEST7613_6852 PF17827 PrmC N-terminal domain BEST7613_6853 PF00472 RF-1 domain BEST7613_6853 PF03462 PCRF domain BEST7613_6854 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_6855 PF13411 MerR HTH family regulatory protein BEST7613_6856 PF03547 Membrane transport protein BEST7613_6857 PF03949 Malic enzyme, NAD binding domain BEST7613_6857 PF00390 Malic enzyme, N-terminal domain BEST7613_6858 PF00265 Thymidine kinase BEST7613_6859 PF01197 Ribosomal protein L31 BEST7613_6860 PF07497 Rho termination factor, RNA-binding domain BEST7613_6860 PF07498 Rho termination factor, N-terminal domain BEST7613_6860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEST7613_6861 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BEST7613_6862 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEST7613_6863 PF00923 Transaldolase/Fructose-6-phosphate aldolase BEST7613_6864 PF01116 Fructose-bisphosphate aldolase class-II BEST7613_6865 PF00072 Response regulator receiver domain BEST7613_6866 PF10740 Domain of unknown function (DUF2529) BEST7613_6867 PF00117 Glutamine amidotransferase class-I BEST7613_6867 PF06418 CTP synthase N-terminus BEST7613_6868 PF05066 HB1, ASXL, restriction endonuclease HTH domain BEST7613_6869 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEST7613_6869 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEST7613_6869 PF02770 Acyl-CoA dehydrogenase, middle domain BEST7613_6870 PF13183 4Fe-4S dicluster domain BEST7613_6870 PF02754 Cysteine-rich domain BEST7613_6871 PF13091 PLD-like domain BEST7613_6872 PF03851 UV-endonuclease UvdE BEST7613_6874 PF01872 RibD C-terminal domain BEST7613_6875 PF00664 ABC transporter transmembrane region BEST7613_6875 PF00005 ABC transporter BEST7613_6876 PF13091 PLD-like domain BEST7613_6876 PF13396 Phospholipase_D-nuclease N-terminal BEST7613_6877 PF02665 Nitrate reductase gamma subunit BEST7613_6878 PF02613 Nitrate reductase delta subunit BEST7613_6879 PF13247 4Fe-4S dicluster domain BEST7613_6879 PF14711 Respiratory nitrate reductase beta C-terminal BEST7613_6880 PF01568 Molydopterin dinucleotide binding domain BEST7613_6880 PF00384 Molybdopterin oxidoreductase BEST7613_6880 PF14710 Respiratory nitrate reductase alpha N-terminal BEST7613_6883 PF00325 Bacterial regulatory proteins, crp family BEST7613_6883 PF00027 Cyclic nucleotide-binding domain BEST7613_6884 PF07690 Major Facilitator Superfamily BEST7613_6885 PF03485 Arginyl tRNA synthetase N terminal domain BEST7613_6885 PF05746 DALR anticodon binding domain BEST7613_6885 PF00750 tRNA synthetases class I (R) BEST7613_6886 PF09148 Domain of unknown function (DUF1934) BEST7613_6887 PF11420 Bacteriocin subtilosin A BEST7613_6888 PF13186 Iron-sulfur cluster-binding domain BEST7613_6888 PF04055 Radical SAM superfamily BEST7613_6888 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BEST7613_6890 PF00005 ABC transporter BEST7613_6892 PF05193 Peptidase M16 inactive domain BEST7613_6893 PF00675 Insulinase (Peptidase family M16) BEST7613_6897 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_6898 PF11131 Rap-phr extracellular signalling BEST7613_6899 PF04073 Aminoacyl-tRNA editing domain BEST7613_6900 PF00491 Arginase family BEST7613_6901 PF17284 Spermidine synthase tetramerisation domain BEST7613_6902 PF00905 Penicillin binding protein transpeptidase domain BEST7613_6902 PF00912 Transglycosylase BEST7613_6903 PF08741 YwhD family BEST7613_6904 PF02163 Peptidase family M50 BEST7613_6905 PF01361 Tautomerase enzyme BEST7613_6906 PF01047 MarR family BEST7613_6907 PF02824 TGS domain BEST7613_6907 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEST7613_6907 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEST7613_6907 PF03129 Anticodon binding domain BEST7613_6908 PF07690 Major Facilitator Superfamily BEST7613_6909 PF02082 Transcriptional regulator BEST7613_6911 PF01966 HD domain BEST7613_6912 PF07293 Protein of unknown function (DUF1450) BEST7613_6914 PF00892 EamA-like transporter family BEST7613_6915 PF03099 Biotin/lipoate A/B protein ligase family BEST7613_6916 PF03466 LysR substrate binding domain BEST7613_6916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_6917 PF01515 Phosphate acetyl/butaryl transferase BEST7613_6920 PF00155 Aminotransferase class I and II BEST7613_6921 PF07690 Major Facilitator Superfamily BEST7613_6924 PF07883 Cupin domain BEST7613_6926 PF07690 Major Facilitator Superfamily BEST7613_6927 PF00324 Amino acid permease BEST7613_6928 PF01546 Peptidase family M20/M25/M40 BEST7613_6929 PF00171 Aldehyde dehydrogenase family BEST7613_6930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEST7613_6930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEST7613_6931 PF17735 Biofilm surface layer A BEST7613_6932 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BEST7613_6933 PF04321 RmlD substrate binding domain BEST7613_6934 PF16363 GDP-mannose 4,6 dehydratase BEST7613_6935 PF00483 Nucleotidyl transferase BEST7613_6936 PF04101 Glycosyltransferase family 28 C-terminal domain BEST7613_6937 PF02348 Cytidylyltransferase BEST7613_6938 PF08666 SAF domain BEST7613_6938 PF03102 NeuB family BEST7613_6939 PF00583 Acetyltransferase (GNAT) family BEST7613_6940 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEST7613_6941 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BEST7613_6942 PF00535 Glycosyl transferase family 2 BEST7613_6943 PF09671 Spore coat protein (Spore_GerQ) BEST7613_6944 PF04241 Protein of unknown function (DUF423) BEST7613_6945 PF00860 Permease family BEST7613_6946 PF17261 Family of unknown function (DUF5327) BEST7613_6947 PF00171 Aldehyde dehydrogenase family BEST7613_6948 PF03167 Uracil DNA glycosylase superfamily BEST7613_6949 PF00535 Glycosyl transferase family 2 BEST7613_6952 PF03551 Transcriptional regulator PadR-like family BEST7613_6953 PF08543 Phosphomethylpyrimidine kinase BEST7613_6955 PF08244 Glycosyl hydrolases family 32 C terminal BEST7613_6955 PF00251 Glycosyl hydrolases family 32 N-terminal domain BEST7613_6956 PF02378 Phosphotransferase system, EIIC BEST7613_6956 PF00367 phosphotransferase system, EIIB BEST7613_6957 PF01226 Formate/nitrite transporter BEST7613_6958 PF03123 CAT RNA binding domain BEST7613_6958 PF00874 PRD domain BEST7613_6960 PF13860 FlgD Ig-like domain BEST7613_6960 PF00082 Subtilase family BEST7613_6960 PF05922 Peptidase inhibitor I9 BEST7613_6960 PF02225 PA domain BEST7613_6961 PF00296 Luciferase-like monooxygenase BEST7613_6962 PF00881 Nitroreductase family BEST7613_6963 PF01098 Cell cycle protein BEST7613_6964 PF17368 Spore morphogenesis and germination YwcE BEST7613_6965 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BEST7613_6966 PF00510 Cytochrome c oxidase subunit III BEST7613_6967 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEST7613_6968 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BEST7613_6968 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEST7613_6969 PF04226 Transglycosylase associated protein BEST7613_6970 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BEST7613_6970 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BEST7613_6971 PF10509 Galactokinase galactose-binding signature BEST7613_6971 PF00288 GHMP kinases N terminal domain BEST7613_6971 PF08544 GHMP kinases C terminal BEST7613_6972 PF04138 GtrA-like protein BEST7613_6973 PF00440 Bacterial regulatory proteins, tetR family BEST7613_6974 PF08671 Anti-repressor SinI BEST7613_6975 PF04341 Protein of unknown function, DUF485 BEST7613_6976 PF00474 Sodium:solute symporter family BEST7613_6977 PF01323 DSBA-like thioredoxin domain BEST7613_6978 PF04261 Dyp-type peroxidase family BEST7613_6978 PF10518 TAT (twin-arginine translocation) pathway signal sequence BEST7613_6979 PF09375 Imelysin BEST7613_6980 PF03239 Iron permease FTR1 family BEST7613_6981 PF02581 Thiamine monophosphate synthase BEST7613_6982 PF02110 Hydroxyethylthiazole kinase family BEST7613_6983 PF03466 LysR substrate binding domain BEST7613_6983 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_6984 PF03788 LrgA family BEST7613_6985 PF04172 LrgB-like family BEST7613_6986 PF12832 MFS_1 like family BEST7613_6987 PF09962 Uncharacterized conserved protein (DUF2196) BEST7613_6988 PF10672 S-adenosylmethionine-dependent methyltransferase BEST7613_6988 PF17785 PUA-like domain BEST7613_6989 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_6990 PF10924 Protein of unknown function (DUF2711) BEST7613_6991 PF02378 Phosphotransferase system, EIIC BEST7613_6992 PF00082 Subtilase family BEST7613_6993 PF02378 Phosphotransferase system, EIIC BEST7613_6993 PF00367 phosphotransferase system, EIIB BEST7613_6994 PF03123 CAT RNA binding domain BEST7613_6994 PF00874 PRD domain BEST7613_6995 PF01501 Glycosyl transferase family 8 BEST7613_6996 PF09529 Integral membrane protein (intg_mem_TP0381) BEST7613_6997 PF01047 MarR family BEST7613_6998 PF00579 tRNA synthetases class I (W and Y) BEST7613_6998 PF01479 S4 domain BEST7613_6999 PF02225 PA domain BEST7613_6999 PF04389 Peptidase family M28 BEST7613_7000 PF04607 Region found in RelA / SpoT proteins BEST7613_7001 PF01040 UbiA prenyltransferase family BEST7613_7002 PF13193 AMP-binding enzyme C-terminal domain BEST7613_7002 PF00501 AMP-binding enzyme BEST7613_7003 PF03062 MBOAT, membrane-bound O-acyltransferase family BEST7613_7004 PF00550 Phosphopantetheine attachment site BEST7613_7005 PF04914 DltD protein BEST7613_7006 PF00106 short chain dehydrogenase BEST7613_7007 PF01063 Amino-transferase class IV BEST7613_7008 PF02056 Family 4 glycosyl hydrolase BEST7613_7008 PF11975 Family 4 glycosyl hydrolase C-terminal domain BEST7613_7009 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BEST7613_7010 PF02378 Phosphotransferase system, EIIC BEST7613_7011 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BEST7613_7012 PF08279 HTH domain BEST7613_7012 PF05043 Mga helix-turn-helix domain BEST7613_7012 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEST7613_7012 PF00874 PRD domain BEST7613_7014 PF02245 Methylpurine-DNA glycosylase (MPG) BEST7613_7015 PF06628 Catalase-related immune-responsive BEST7613_7015 PF00199 Catalase BEST7613_7016 PF07690 Major Facilitator Superfamily BEST7613_7017 PF12679 ABC-2 family transporter protein BEST7613_7018 PF00005 ABC transporter BEST7613_7018 PF13732 Domain of unknown function (DUF4162) BEST7613_7019 PF13396 Phospholipase_D-nuclease N-terminal BEST7613_7021 PF17280 Family of unknown function (DUF5345) BEST7613_7022 PF08281 Sigma-70, region 4 BEST7613_7022 PF04542 Sigma-70 region 2 BEST7613_7023 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BEST7613_7024 PF01256 Carbohydrate kinase BEST7613_7025 PF00005 ABC transporter BEST7613_7025 PF00664 ABC transporter transmembrane region BEST7613_7026 PF00664 ABC transporter transmembrane region BEST7613_7026 PF00005 ABC transporter BEST7613_7027 PF02322 Cytochrome bd terminal oxidase subunit II BEST7613_7028 PF01654 Cytochrome bd terminal oxidase subunit I BEST7613_7029 PF03390 2-hydroxycarboxylate transporter family BEST7613_7030 PF01435 Peptidase family M48 BEST7613_7032 PF01522 Polysaccharide deacetylase BEST7613_7033 PF03459 TOBE domain BEST7613_7033 PF17912 MalK OB fold domain BEST7613_7033 PF00005 ABC transporter BEST7613_7034 PF13556 PucR C-terminal helix-turn-helix domain BEST7613_7035 PF00171 Aldehyde dehydrogenase family BEST7613_7036 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BEST7613_7036 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BEST7613_7037 PF11611 Domain of unknown function (DUF4352) BEST7613_7038 PF16363 GDP-mannose 4,6 dehydratase BEST7613_7039 PF01161 Phosphatidylethanolamine-binding protein BEST7613_7040 PF03466 LysR substrate binding domain BEST7613_7040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_7042 PF07730 Histidine kinase BEST7613_7043 PF00196 Bacterial regulatory proteins, luxR family BEST7613_7043 PF00072 Response regulator receiver domain BEST7613_7044 PF01546 Peptidase family M20/M25/M40 BEST7613_7044 PF07687 Peptidase dimerisation domain BEST7613_7046 PF04525 LURP-one-related BEST7613_7047 PF01717 Cobalamin-independent synthase, Catalytic domain BEST7613_7048 PF01717 Cobalamin-independent synthase, Catalytic domain BEST7613_7050 PF01144 Coenzyme A transferase BEST7613_7051 PF01144 Coenzyme A transferase BEST7613_7053 PF08241 Methyltransferase domain BEST7613_7054 PF01773 Na+ dependent nucleoside transporter N-terminus BEST7613_7054 PF07662 Na+ dependent nucleoside transporter C-terminus BEST7613_7058 PF18011 C-terminal domain found in long catalases BEST7613_7058 PF06628 Catalase-related immune-responsive BEST7613_7058 PF00199 Catalase BEST7613_7059 PF03600 Citrate transporter BEST7613_7060 PF00722 Glycosyl hydrolases family 16 BEST7613_7061 PF00874 PRD domain BEST7613_7061 PF03123 CAT RNA binding domain BEST7613_7063 PF11700 Vacuole effluxer Atg22 like BEST7613_7064 PF03880 DbpA RNA binding domain BEST7613_7064 PF00271 Helicase conserved C-terminal domain BEST7613_7064 PF00270 DEAD/DEAH box helicase BEST7613_7065 PF13472 GDSL-like Lipase/Acylhydrolase family BEST7613_7069 PF14176 YxiJ-like protein BEST7613_7070 PF10898 Protein of unknown function (DUF2716) BEST7613_7077 PF05593 RHS Repeat BEST7613_7078 PF00892 EamA-like transporter family BEST7613_7079 PF00582 Universal stress protein family BEST7613_7080 PF00232 Glycosyl hydrolase family 1 BEST7613_7081 PF02378 Phosphotransferase system, EIIC BEST7613_7081 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BEST7613_7081 PF00367 phosphotransferase system, EIIB BEST7613_7082 PF18593 CdiI immunity protein BEST7613_7084 PF04740 LXG domain of WXG superfamily BEST7613_7084 PF14449 Pre-toxin TG BEST7613_7086 PF16888 Domain of unknown function (DUF5082) BEST7613_7087 PF16369 C-terminal lipocalin-like domain BEST7613_7087 PF04616 Glycosyl hydrolases family 43 BEST7613_7089 PF09021 HutP BEST7613_7090 PF00221 Aromatic amino acid lyase BEST7613_7091 PF17392 Urocanase C-terminal domain BEST7613_7091 PF17391 Urocanase N-terminal domain BEST7613_7091 PF01175 Urocanase Rossmann-like domain BEST7613_7092 PF01979 Amidohydrolase family BEST7613_7093 PF00491 Arginase family BEST7613_7094 PF00324 Amino acid permease BEST7613_7095 PF02885 Glycosyl transferase family, helical bundle domain BEST7613_7095 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BEST7613_7095 PF00591 Glycosyl transferase family, a/b domain BEST7613_7096 PF01773 Na+ dependent nucleoside transporter N-terminus BEST7613_7096 PF07662 Na+ dependent nucleoside transporter C-terminus BEST7613_7097 PF01791 DeoC/LacD family aldolase BEST7613_7098 PF04198 Putative sugar-binding domain BEST7613_7099 PF06724 Domain of Unknown Function (DUF1206) BEST7613_7100 PF04346 Ethanolamine utilisation protein, EutH BEST7613_7101 PF03972 MmgE/PrpD family BEST7613_7103 PF00005 ABC transporter BEST7613_7104 PF00528 Binding-protein-dependent transport system inner membrane component BEST7613_7105 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEST7613_7109 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BEST7613_7112 PF11631 Protein of unknown function (DUF3255) BEST7613_7116 PF01497 Periplasmic binding protein BEST7613_7117 PF06486 Protein of unknown function (DUF1093) BEST7613_7118 PF02687 FtsX-like permease family BEST7613_7119 PF00005 ABC transporter BEST7613_7120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_7121 PF00486 Transcriptional regulatory protein, C terminal BEST7613_7121 PF00072 Response regulator receiver domain BEST7613_7122 PF01116 Fructose-bisphosphate aldolase class-II BEST7613_7123 PF01261 Xylose isomerase-like TIM barrel BEST7613_7124 PF01261 Xylose isomerase-like TIM barrel BEST7613_7125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BEST7613_7125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BEST7613_7126 PF07690 Major Facilitator Superfamily BEST7613_7127 PF01261 Xylose isomerase-like TIM barrel BEST7613_7128 PF00205 Thiamine pyrophosphate enzyme, central domain BEST7613_7128 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEST7613_7128 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEST7613_7129 PF00294 pfkB family carbohydrate kinase BEST7613_7130 PF04962 KduI/IolB family BEST7613_7131 PF00171 Aldehyde dehydrogenase family BEST7613_7132 PF00455 DeoR C terminal sensor domain BEST7613_7132 PF08220 DeoR-like helix-turn-helix domain BEST7613_7133 PF00248 Aldo/keto reductase family BEST7613_7136 PF10850 Protein of unknown function (DUF2653) BEST7613_7137 PF00083 Sugar (and other) transporter BEST7613_7138 PF00183 Hsp90 protein BEST7613_7141 PF00440 Bacterial regulatory proteins, tetR family BEST7613_7142 PF00171 Aldehyde dehydrogenase family BEST7613_7143 PF00583 Acetyltransferase (GNAT) family BEST7613_7144 PF08007 Cupin superfamily protein BEST7613_7145 PF08241 Methyltransferase domain BEST7613_7146 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BEST7613_7148 PF00733 Asparagine synthase BEST7613_7148 PF13537 Glutamine amidotransferase domain BEST7613_7149 PF07690 Major Facilitator Superfamily BEST7613_7150 PF01011 PQQ enzyme repeat BEST7613_7150 PF13360 PQQ-like domain BEST7613_7150 PF13570 PQQ-like domain BEST7613_7151 PF17369 Family of unknown function (DUF5391) BEST7613_7152 PF06271 RDD family BEST7613_7153 PF04235 Protein of unknown function (DUF418) BEST7613_7154 PF07883 Cupin domain BEST7613_7155 PF00440 Bacterial regulatory proteins, tetR family BEST7613_7156 PF00106 short chain dehydrogenase BEST7613_7157 PF01047 MarR family BEST7613_7158 PF03788 LrgA family BEST7613_7159 PF04172 LrgB-like family BEST7613_7160 PF04230 Polysaccharide pyruvyl transferase BEST7613_7161 PF02595 Glycerate kinase family BEST7613_7162 PF00392 Bacterial regulatory proteins, gntR family BEST7613_7162 PF07729 FCD domain BEST7613_7163 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEST7613_7163 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEST7613_7164 PF02447 GntP family permease BEST7613_7165 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BEST7613_7165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEST7613_7166 PF00578 AhpC/TSA family BEST7613_7167 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEST7613_7167 PF13192 Thioredoxin domain BEST7613_7168 PF00232 Glycosyl hydrolase family 1 BEST7613_7169 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BEST7613_7170 PF00392 Bacterial regulatory proteins, gntR family BEST7613_7170 PF07702 UTRA domain BEST7613_7173 PF00005 ABC transporter BEST7613_7175 PF04055 Radical SAM superfamily BEST7613_7177 PF06874 Firmicute fructose-1,6-bisphosphatase BEST7613_7178 PF10088 Uncharacterised protein conserved in bacteria (DUF2326) BEST7613_7178 PF13476 AAA domain BEST7613_7180 PF00149 Calcineurin-like phosphoesterase BEST7613_7181 PF02590 Predicted SPOUT methyltransferase BEST7613_7182 PF14116 YyzF-like protein BEST7613_7184 PF08240 Alcohol dehydrogenase GroES-like domain BEST7613_7184 PF00107 Zinc-binding dehydrogenase BEST7613_7186 PF10852 Protein of unknown function (DUF2651) BEST7613_7189 PF00583 Acetyltransferase (GNAT) family BEST7613_7190 PF18801 response regulator aspartate phosphatase H, N terminal BEST7613_7191 PF00491 Arginase family BEST7613_7192 PF00324 Amino acid permease BEST7613_7193 PF00202 Aminotransferase class-III BEST7613_7194 PF02954 Bacterial regulatory protein, Fis family BEST7613_7194 PF13426 PAS domain BEST7613_7194 PF00158 Sigma-54 interaction domain BEST7613_7195 PF00672 HAMP domain BEST7613_7195 PF18698 Histidine kinase sensor domain BEST7613_7195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_7195 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_7196 PF13180 PDZ domain BEST7613_7197 PF00753 Metallo-beta-lactamase superfamily BEST7613_7198 PF09648 YycH protein BEST7613_7199 PF07435 YycH protein BEST7613_7200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEST7613_7200 PF00672 HAMP domain BEST7613_7200 PF00512 His Kinase A (phospho-acceptor) domain BEST7613_7200 PF13426 PAS domain BEST7613_7201 PF00072 Response regulator receiver domain BEST7613_7201 PF00486 Transcriptional regulatory protein, C terminal BEST7613_7202 PF00709 Adenylosuccinate synthetase BEST7613_7203 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_7204 PF00772 DnaB-like helicase N terminal domain BEST7613_7204 PF03796 DnaB-like helicase C terminal domain BEST7613_7205 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) BEST7613_7207 PF14174 YycC-like protein BEST7613_7208 PF07690 Major Facilitator Superfamily BEST7613_7209 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BEST7613_7210 PF03948 Ribosomal protein L9, C-terminal domain BEST7613_7210 PF01281 Ribosomal protein L9, N-terminal domain BEST7613_7211 PF01368 DHH family BEST7613_7211 PF02272 DHHA1 domain BEST7613_7212 PF09991 Predicted membrane protein (DUF2232) BEST7613_7214 PF07875 Coat F domain BEST7613_7215 PF01638 HxlR-like helix-turn-helix BEST7613_7216 PF01368 DHH family BEST7613_7216 PF02833 DHHA2 domain BEST7613_7219 PF07690 Major Facilitator Superfamily BEST7613_7222 PF10916 Protein of unknown function (DUF2712) BEST7613_7223 PF10920 Protein of unknown function (DUF2705) BEST7613_7225 PF10920 Protein of unknown function (DUF2705) BEST7613_7226 PF00005 ABC transporter BEST7613_7228 PF13474 SnoaL-like domain BEST7613_7229 PF00805 Pentapeptide repeats (8 copies) BEST7613_7230 PF07690 Major Facilitator Superfamily BEST7613_7231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEST7613_7231 PF03466 LysR substrate binding domain BEST7613_7232 PF13673 Acetyltransferase (GNAT) domain BEST7613_7234 PF00753 Metallo-beta-lactamase superfamily BEST7613_7235 PF01047 MarR family BEST7613_7236 PF13673 Acetyltransferase (GNAT) domain BEST7613_7238 PF00583 Acetyltransferase (GNAT) family BEST7613_7239 PF04237 YjbR BEST7613_7240 PF01872 RibD C-terminal domain BEST7613_7241 PF07690 Major Facilitator Superfamily BEST7613_7242 PF03190 Protein of unknown function, DUF255 BEST7613_7243 PF13411 MerR HTH family regulatory protein BEST7613_7244 PF00892 EamA-like transporter family BEST7613_7245 PF03190 Protein of unknown function, DUF255 BEST7613_7246 PF02517 CPBP intramembrane metalloprotease BEST7613_7247 PF00083 Sugar (and other) transporter BEST7613_7248 PF14602 Hexapeptide repeat of succinyl-transferase BEST7613_7248 PF12464 Maltose acetyltransferase BEST7613_7249 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEST7613_7250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BEST7613_7250 PF00356 Bacterial regulatory proteins, lacI family BEST7613_7251 PF03372 Endonuclease/Exonuclease/phosphatase family BEST7613_7252 PF01084 Ribosomal protein S18 BEST7613_7253 PF00436 Single-strand binding protein family BEST7613_7254 PF01250 Ribosomal protein S6 BEST7613_7255 PF01926 50S ribosome-binding GTPase BEST7613_7255 PF06071 Protein of unknown function (DUF933) BEST7613_7256 PF01568 Molydopterin dinucleotide binding domain BEST7613_7256 PF00384 Molybdopterin oxidoreductase BEST7613_7256 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEST7613_7257 PF06107 Bacterial protein of unknown function (DUF951) BEST7613_7259 PF06866 Protein of unknown function (DUF1256) BEST7613_7260 PF02195 ParB-like nuclease domain BEST7613_7260 PF17762 HTH domain found in ParB protein BEST7613_7261 PF13614 AAA domain BEST7613_7262 PF06713 Bacterial PH domain BEST7613_7263 PF17762 HTH domain found in ParB protein BEST7613_7263 PF02195 ParB-like nuclease domain BEST7613_7264 PF02527 rRNA small subunit methyltransferase G BEST7613_7265 PF01134 Glucose inhibited division protein A BEST7613_7265 PF13932 GidA associated domain BEST7613_7266 PF10396 GTP-binding protein TrmE N-terminus BEST7613_7266 PF01926 50S ribosome-binding GTPase BEST7613_7266 PF12631 MnmE helical domain BEST7613_7267 PF14804 Jag N-terminus BEST7613_7267 PF01424 R3H domain BEST7613_7268 PF02096 60Kd inner membrane protein BEST7613_7269 PF00825 Ribonuclease P BEST7613_7270 PF00468 Ribosomal protein L34