locus-tag class description JR441_00005 PF00308 Bacterial dnaA protein JR441_00005 PF08299 Bacterial dnaA protein helix-turn-helix JR441_00005 PF11638 DnaA N-terminal domain JR441_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JR441_00010 PF02767 DNA polymerase III beta subunit, central domain JR441_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JR441_00020 PF02463 RecF/RecN/SMC N terminal domain JR441_00025 PF04025 Domain of unknown function (DUF370) JR441_00030 PF00204 DNA gyrase B JR441_00030 PF00986 DNA gyrase B subunit, carboxyl terminus JR441_00030 PF01751 Toprim domain JR441_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller JR441_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A JR441_00065 PF14175 YaaC-like Protein JR441_00070 PF00478 IMP dehydrogenase / GMP reductase domain JR441_00070 PF00571 CBS domain JR441_00075 PF07943 Penicillin-binding protein 5, C-terminal domain JR441_00075 PF00768 D-alanyl-D-alanine carboxypeptidase JR441_00080 PF01680 SOR/SNZ family JR441_00085 PF01174 SNO glutamine amidotransferase family JR441_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR441_00090 PF02403 Seryl-tRNA synthetase N-terminal domain JR441_00100 PF01712 Deoxynucleoside kinase JR441_00105 PF01712 Deoxynucleoside kinase JR441_00110 PF00704 Glycosyl hydrolases family 18 JR441_00110 PF01476 LysM domain JR441_00115 PF00857 Isochorismatase family JR441_00120 PF14437 MafB19-like deaminase JR441_00130 PF12169 DNA polymerase III subunits gamma and tau domain III JR441_00135 PF02575 YbaB/EbfC DNA-binding family JR441_00140 PF13662 Toprim domain JR441_00140 PF02132 RecR protein JR441_00145 PF10704 Protein of unknown function (DUF2508) JR441_00150 PF07441 SigmaK-factor processing regulatory protein BofA JR441_00180 PF10764 Inhibitor of sigma-G Gin JR441_00185 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein JR441_00190 PF05816 Toxic anion resistance protein (TelA) JR441_00195 PF01276 Orn/Lys/Arg decarboxylase, major domain JR441_00195 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JR441_00200 PF02223 Thymidylate kinase JR441_00205 PF06153 Cyclic-di-AMP receptor JR441_00210 PF03885 Protein of unknown function (DUF327) JR441_00215 PF09115 DNA polymerase III, delta subunit, C terminal JR441_00220 PF04468 PSP1 C-terminal conserved region JR441_00225 PF06156 Initiation control protein YabA JR441_00230 PF05175 Methyltransferase small domain JR441_00235 PF01541 GIY-YIG catalytic domain JR441_00240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR441_00245 PF18277 AbrB C-terminal domain JR441_00245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JR441_00250 PF01588 Putative tRNA binding domain JR441_00250 PF09334 tRNA synthetases class I (M) JR441_00250 PF08264 Anticodon-binding domain of tRNA JR441_00255 PF01026 TatD related DNase JR441_00260 PF07501 G5 domain JR441_00260 PF03990 G5-linked-Ubiquitin-like domain JR441_00260 PF06725 3D domain JR441_00265 PF13331 Domain of unknown function (DUF4093) JR441_00265 PF13662 Toprim domain JR441_00270 PF00398 Ribosomal RNA adenine dimethylase JR441_00275 PF05582 YabG peptidase U57 JR441_00280 PF06257 Biofilm formation stimulator VEG JR441_00285 PF00269 Small, acid-soluble spore proteins, alpha/beta type JR441_00290 PF00288 GHMP kinases N terminal domain JR441_00290 PF08544 GHMP kinases C terminal JR441_00295 PF09182 Bacterial purine repressor, N-terminal JR441_00295 PF00156 Phosphoribosyl transferase domain JR441_00300 PF01042 Endoribonuclease L-PSP JR441_00305 PF04026 SpoVG JR441_00310 PF00132 Bacterial transferase hexapeptide (six repeats) JR441_00310 PF00483 Nucleotidyl transferase JR441_00315 PF14572 Phosphoribosyl synthetase-associated domain JR441_00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JR441_00320 PF01386 Ribosomal L25p family JR441_00320 PF14693 Ribosomal protein TL5, C-terminal domain JR441_00325 PF01195 Peptidyl-tRNA hydrolase JR441_00330 PF10955 Protein of unknown function (DUF2757) JR441_00335 PF02559 CarD-like/TRCF domain JR441_00335 PF00270 DEAD/DEAH box helicase JR441_00335 PF00271 Helicase conserved C-terminal domain JR441_00335 PF17757 UvrB interaction domain JR441_00335 PF03461 TRCF domain JR441_00340 PF15714 Stage V sporulation protein T C-terminal, transcription factor JR441_00340 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JR441_00345 PF01943 Polysaccharide biosynthesis protein JR441_00345 PF14667 Polysaccharide biosynthesis C-terminal domain JR441_00350 PF03819 MazG nucleotide pyrophosphohydrolase domain JR441_00350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR441_00355 PF01479 S4 domain JR441_00360 PF07873 YabP family JR441_00365 PF09578 Spore cortex protein YabQ (Spore_YabQ) JR441_00370 PF04977 Septum formation initiator JR441_00375 PF00575 S1 RNA binding domain JR441_00390 PF07228 Stage II sporulation protein E (SpoIIE) JR441_00395 PF00092 von Willebrand factor type A domain JR441_00400 PF00069 Protein kinase domain JR441_00405 PF09179 TilS substrate binding domain JR441_00405 PF11734 TilS substrate C-terminal domain JR441_00405 PF01171 PP-loop family JR441_00410 PF00156 Phosphoribosyl transferase domain JR441_00415 PF06480 FtsH Extracellular JR441_00415 PF00004 ATPase family associated with various cellular activities (AAA) JR441_00415 PF01434 Peptidase family M41 JR441_00415 PF17862 AAA+ lid domain JR441_00420 PF03309 Type III pantothenate kinase JR441_00425 PF01430 Hsp33 protein JR441_00430 PF13145 PPIC-type PPIASE domain JR441_00435 PF00291 Pyridoxal-phosphate dependent enzyme JR441_00440 PF04715 Anthranilate synthase component I, N terminal region JR441_00440 PF00425 chorismate binding enzyme JR441_00445 PF00117 Glutamine amidotransferase class-I JR441_00450 PF01063 Amino-transferase class IV JR441_00455 PF00809 Pterin binding enzyme JR441_00460 PF02152 Dihydroneopterin aldolase JR441_00465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JR441_00470 PF01381 Helix-turn-helix JR441_00475 PF01207 Dihydrouridine synthase (Dus) JR441_00480 PF01336 OB-fold nucleic acid binding domain JR441_00480 PF00152 tRNA synthetases class II (D, K and N) JR441_00560 PF05848 CtsR N-terminal HTH domain JR441_00560 PF17727 CtsR C-terminal dimerization domain JR441_00565 PF02151 UvrB/uvrC motif JR441_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JR441_00575 PF02861 Clp amino terminal domain, pathogenicity island component JR441_00575 PF17871 AAA lid domain JR441_00575 PF10431 C-terminal, D2-small domain, of ClpB protein JR441_00575 PF07724 AAA domain (Cdc48 subfamily) JR441_00575 PF00004 ATPase family associated with various cellular activities (AAA) JR441_00580 PF18073 Rubredoxin metal binding domain JR441_00585 PF02457 DisA bacterial checkpoint controller nucleotide-binding JR441_00585 PF10635 DisA bacterial checkpoint controller linker region JR441_00595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JR441_00600 PF02542 YgbB family JR441_00605 PF00749 tRNA synthetases class I (E and Q), catalytic domain JR441_00610 PF06426 Serine acetyltransferase, N-terminal JR441_00610 PF00132 Bacterial transferase hexapeptide (six repeats) JR441_00615 PF09190 DALR domain JR441_00615 PF01406 tRNA synthetases class I (C) catalytic domain JR441_00620 PF00636 Ribonuclease III domain JR441_00625 PF00588 SpoU rRNA Methylase family JR441_00625 PF08032 RNA 2'-O ribose methyltransferase substrate binding JR441_00630 PF05991 YacP-like NYN domain JR441_00635 PF04542 Sigma-70 region 2 JR441_00635 PF08281 Sigma-70, region 4 JR441_00640 PF00471 Ribosomal protein L33 JR441_00645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JR441_00650 PF02357 Transcription termination factor nusG JR441_00650 PF00467 KOW motif JR441_00655 PF00298 Ribosomal protein L11, RNA binding domain JR441_00655 PF03946 Ribosomal protein L11, N-terminal domain JR441_00660 PF00687 Ribosomal protein L1p/L10e family JR441_00665 PF00466 Ribosomal protein L10 JR441_00670 PF16320 Ribosomal protein L7/L12 dimerisation domain JR441_00670 PF00542 Ribosomal protein L7/L12 C-terminal domain JR441_00675 PF05175 Methyltransferase small domain JR441_00680 PF10385 RNA polymerase beta subunit external 1 domain JR441_00680 PF04563 RNA polymerase beta subunit JR441_00680 PF04565 RNA polymerase Rpb2, domain 3 JR441_00680 PF00562 RNA polymerase Rpb2, domain 6 JR441_00680 PF04561 RNA polymerase Rpb2, domain 2 JR441_00680 PF04560 RNA polymerase Rpb2, domain 7 JR441_00685 PF04997 RNA polymerase Rpb1, domain 1 JR441_00685 PF00623 RNA polymerase Rpb1, domain 2 JR441_00685 PF04998 RNA polymerase Rpb1, domain 5 JR441_00685 PF05000 RNA polymerase Rpb1, domain 4 JR441_00685 PF04983 RNA polymerase Rpb1, domain 3 JR441_00690 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JR441_00695 PF00164 Ribosomal protein S12/S23 JR441_00700 PF00177 Ribosomal protein S7p/S5e JR441_00705 PF03764 Elongation factor G, domain IV JR441_00705 PF03144 Elongation factor Tu domain 2 JR441_00705 PF00679 Elongation factor G C-terminus JR441_00705 PF14492 Elongation Factor G, domain II JR441_00705 PF00009 Elongation factor Tu GTP binding domain JR441_00710 PF03144 Elongation factor Tu domain 2 JR441_00710 PF03143 Elongation factor Tu C-terminal domain JR441_00710 PF00009 Elongation factor Tu GTP binding domain JR441_00715 PF12146 Serine aminopeptidase, S33 JR441_00720 PF00338 Ribosomal protein S10p/S20e JR441_00725 PF00297 Ribosomal protein L3 JR441_00730 PF00573 Ribosomal protein L4/L1 family JR441_00735 PF00276 Ribosomal protein L23 JR441_00740 PF03947 Ribosomal Proteins L2, C-terminal domain JR441_00740 PF00181 Ribosomal Proteins L2, RNA binding domain JR441_00745 PF00203 Ribosomal protein S19 JR441_00750 PF00237 Ribosomal protein L22p/L17e JR441_00755 PF07650 KH domain JR441_00755 PF00189 Ribosomal protein S3, C-terminal domain JR441_00760 PF00252 Ribosomal protein L16p/L10e JR441_00765 PF00831 Ribosomal L29 protein JR441_00770 PF00366 Ribosomal protein S17 JR441_00775 PF00238 Ribosomal protein L14p/L23e JR441_00780 PF00467 KOW motif JR441_00780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JR441_00785 PF00673 ribosomal L5P family C-terminus JR441_00785 PF00281 Ribosomal protein L5 JR441_00790 PF00253 Ribosomal protein S14p/S29e JR441_00795 PF00410 Ribosomal protein S8 JR441_00800 PF00347 Ribosomal protein L6 JR441_00805 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JR441_00810 PF03719 Ribosomal protein S5, C-terminal domain JR441_00810 PF00333 Ribosomal protein S5, N-terminal domain JR441_00815 PF00327 Ribosomal protein L30p/L7e JR441_00820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JR441_00825 PF00344 SecY translocase JR441_00830 PF05191 Adenylate kinase, active site lid JR441_00835 PF00557 Metallopeptidase family M24 JR441_00845 PF01176 Translation initiation factor 1A / IF-1 JR441_00850 PF00444 Ribosomal protein L36 JR441_00855 PF00416 Ribosomal protein S13/S18 JR441_00860 PF00411 Ribosomal protein S11 JR441_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain JR441_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JR441_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JR441_00870 PF01196 Ribosomal protein L17 JR441_00875 PF00005 ABC transporter JR441_00880 PF00005 ABC transporter JR441_00885 PF02361 Cobalt transport protein JR441_00890 PF01416 tRNA pseudouridine synthase JR441_00895 PF00572 Ribosomal protein L13 JR441_00900 PF00380 Ribosomal protein S9/S16 JR441_00905 PF08241 Methyltransferase domain JR441_00910 PF10730 Protein of unknown function (DUF2521) JR441_00915 PF01520 N-acetylmuramoyl-L-alanine amidase JR441_00920 PF10609 NUBPL iron-transfer P-loop NTPase JR441_00925 PF17898 Spore germination GerD central core domain JR441_00930 PF14089 KinB-signalling pathway activation in sporulation JR441_00935 PF01522 Polysaccharide deacetylase JR441_01020 PF01740 STAS domain JR441_01020 PF00916 Sulfate permease family JR441_01025 PF01758 Sodium Bile acid symporter family JR441_01030 PF00756 Putative esterase JR441_01035 PF01032 FecCD transport family JR441_01040 PF01032 FecCD transport family JR441_01045 PF01497 Periplasmic binding protein JR441_01050 PF01497 Periplasmic binding protein JR441_01050 PF12833 Helix-turn-helix domain JR441_01055 PF07075 Protein of unknown function (DUF1343) JR441_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain JR441_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain JR441_01065 PF00144 Beta-lactamase JR441_01070 PF02378 Phosphotransferase system, EIIC JR441_01070 PF00367 phosphotransferase system, EIIB JR441_01075 PF01418 Helix-turn-helix domain, rpiR family JR441_01075 PF01380 SIS domain JR441_01080 PF01380 SIS domain JR441_01090 PF04463 Protein of unknown function (DUF523) JR441_01120 PF04542 Sigma-70 region 2 JR441_01120 PF08281 Sigma-70, region 4 JR441_01125 PF13490 Putative zinc-finger JR441_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding JR441_01135 PF07949 YbbR-like protein JR441_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR441_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR441_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR441_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR441_01145 PF01380 SIS domain JR441_01155 PF00730 HhH-GPD superfamily base excision DNA repair protein JR441_01155 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain JR441_01160 PF12833 Helix-turn-helix domain JR441_01160 PF02805 Metal binding domain of Ada JR441_01165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JR441_01165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JR441_01170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JR441_01170 PF00361 Proton-conducting membrane transporter JR441_01175 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JR441_01190 PF10057 Uncharacterized conserved protein (DUF2294) JR441_01200 PF07690 Major Facilitator Superfamily JR441_01215 PF00561 alpha/beta hydrolase fold JR441_01220 PF00486 Transcriptional regulatory protein, C terminal JR441_01220 PF00072 Response regulator receiver domain JR441_01225 PF00512 His Kinase A (phospho-acceptor) domain JR441_01225 PF00672 HAMP domain JR441_01235 PF00069 Protein kinase domain JR441_01245 PF16226 Domain of unknown function (DUF4885) JR441_01250 PF00324 Amino acid permease JR441_01255 PF17334 Minor curli fiber component A JR441_01260 PF17340 Family of unknown function (DUF5370) JR441_01265 PF00905 Penicillin binding protein transpeptidase domain JR441_01270 PF00067 Cytochrome P450 JR441_01280 PF13520 Amino acid permease JR441_01285 PF03009 Glycerophosphoryl diester phosphodiesterase family JR441_01290 PF07690 Major Facilitator Superfamily JR441_01295 PF10852 Protein of unknown function (DUF2651) JR441_01300 PF01047 MarR family JR441_01300 PF00583 Acetyltransferase (GNAT) family JR441_01305 PF07690 Major Facilitator Superfamily JR441_01310 PF00892 EamA-like transporter family JR441_01315 PF02311 AraC-like ligand binding domain JR441_01315 PF12833 Helix-turn-helix domain JR441_01320 PF02222 ATP-grasp domain JR441_01325 PF00089 Trypsin JR441_01330 PF10794 Protein of unknown function (DUF2606) JR441_01335 PF12697 Alpha/beta hydrolase family JR441_01340 PF01066 CDP-alcohol phosphatidyltransferase JR441_01345 PF09335 SNARE associated Golgi protein JR441_01350 PF02666 Phosphatidylserine decarboxylase JR441_01360 PF05139 Erythromycin esterase JR441_01365 PF12833 Helix-turn-helix domain JR441_01370 PF17773 UPF0176 acylphosphatase like domain JR441_01370 PF12368 Rhodanase C-terminal JR441_01370 PF00581 Rhodanese-like domain JR441_01375 PF00375 Sodium:dicarboxylate symporter family JR441_01380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR441_01380 PF00367 phosphotransferase system, EIIB JR441_01380 PF02378 Phosphotransferase system, EIIC JR441_01385 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JR441_01390 PF00392 Bacterial regulatory proteins, gntR family JR441_01390 PF07702 UTRA domain JR441_01395 PF07853 Protein of unknown function (DUF1648) JR441_01400 PF01063 Amino-transferase class IV JR441_01405 PF00324 Amino acid permease JR441_01410 PF02574 Homocysteine S-methyltransferase JR441_01415 PF01235 Sodium:alanine symporter family JR441_01420 PF04960 Glutaminase JR441_01425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_01430 PF00072 Response regulator receiver domain JR441_01430 PF08664 YcbB domain JR441_01435 PF00701 Dihydrodipicolinate synthetase family JR441_01440 PF00171 Aldehyde dehydrogenase family JR441_01445 PF07690 Major Facilitator Superfamily JR441_01450 PF13378 Enolase C-terminal domain-like JR441_01455 PF00392 Bacterial regulatory proteins, gntR family JR441_01455 PF07729 FCD domain JR441_01460 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JR441_01460 PF08666 SAF domain JR441_01465 PF01636 Phosphotransferase enzyme family JR441_01470 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein JR441_01475 PF00892 EamA-like transporter family JR441_01480 PF00486 Transcriptional regulatory protein, C terminal JR441_01480 PF00072 Response regulator receiver domain JR441_01485 PF00512 His Kinase A (phospho-acceptor) domain JR441_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_01490 PF00005 ABC transporter JR441_01505 PF10710 Protein of unknown function (DUF2512) JR441_01510 PF07486 Cell Wall Hydrolase JR441_01515 PF10138 vWA found in TerF C terminus JR441_01525 PF09423 PhoD-like phosphatase JR441_01525 PF16655 PhoD-like phosphatase, N-terminal domain JR441_01530 PF02416 mttA/Hcf106 family JR441_01535 PF00902 Sec-independent protein translocase protein (TatC) JR441_01540 PF01470 Pyroglutamyl peptidase JR441_01545 PF00266 Aminotransferase class-V JR441_01550 PF07690 Major Facilitator Superfamily JR441_01555 PF00440 Bacterial regulatory proteins, tetR family JR441_01560 PF00710 Asparaginase, N-terminal JR441_01560 PF17763 Glutaminase/Asparaginase C-terminal domain JR441_01565 PF01674 Lipase (class 2) JR441_01570 PF06271 RDD family JR441_01575 PF02810 SEC-C motif JR441_01575 PF05225 helix-turn-helix, Psq domain JR441_01580 PF14501 GHKL domain JR441_01585 PF04397 LytTr DNA-binding domain JR441_01585 PF00072 Response regulator receiver domain JR441_01590 PF00005 ABC transporter JR441_01595 PF12679 ABC-2 family transporter protein JR441_01600 PF00248 Aldo/keto reductase family JR441_01605 PF11611 Domain of unknown function (DUF4352) JR441_01605 PF17118 Domain of unknown function (DUF5105) JR441_01620 PF16244 Domain of unknown function (DUF4901) JR441_01625 PF13539 D-alanyl-D-alanine carboxypeptidase JR441_01630 PF18801 response regulator aspartate phosphatase H, N terminal JR441_01640 PF00128 Alpha amylase, catalytic domain JR441_01645 PF01297 Zinc-uptake complex component A periplasmic JR441_01650 PF00005 ABC transporter JR441_01655 PF00950 ABC 3 transport family JR441_01660 PF00296 Luciferase-like monooxygenase JR441_01665 PF02342 TerD domain JR441_01670 PF02342 TerD domain JR441_01675 PF02342 TerD domain JR441_01680 PF03741 Integral membrane protein TerC family JR441_01685 PF14266 Putative component of 'biosynthetic module' JR441_01690 PF05816 Toxic anion resistance protein (TelA) JR441_01695 PF07690 Major Facilitator Superfamily JR441_01700 PF07690 Major Facilitator Superfamily JR441_01710 PF00571 CBS domain JR441_01710 PF00005 ABC transporter JR441_01715 PF00528 Binding-protein-dependent transport system inner membrane component JR441_01720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JR441_01725 PF01546 Peptidase family M20/M25/M40 JR441_01725 PF07687 Peptidase dimerisation domain JR441_01730 PF03606 C4-dicarboxylate anaerobic carrier JR441_01740 PF00128 Alpha amylase, catalytic domain JR441_01740 PF16738 Starch-binding module 26 JR441_01745 PF00056 lactate/malate dehydrogenase, NAD binding domain JR441_01745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JR441_01750 PF02652 L-lactate permease JR441_01755 PF07690 Major Facilitator Superfamily JR441_01760 PF01047 MarR family JR441_01765 PF01810 LysE type translocator JR441_01770 PF08892 YqcI/YcgG family JR441_01775 PF00324 Amino acid permease JR441_01780 PF09347 Domain of unknown function (DUF1989) JR441_01785 PF02540 NAD synthase JR441_01795 PF01202 Shikimate kinase JR441_01800 PF08241 Methyltransferase domain JR441_01805 PF03466 LysR substrate binding domain JR441_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_01810 PF05448 Acetyl xylan esterase (AXE1) JR441_01815 PF10127 RNA repair pathway DNA polymerase beta family JR441_01820 PF01619 Proline dehydrogenase JR441_01825 PF00171 Aldehyde dehydrogenase family JR441_01830 PF00474 Sodium:solute symporter family JR441_01835 PF17853 GGDEF-like domain JR441_01835 PF13556 PucR C-terminal helix-turn-helix domain JR441_01840 PF09323 Domain of unknown function (DUF1980) JR441_01845 PF03773 Predicted permease JR441_01850 PF00561 alpha/beta hydrolase fold JR441_01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_01860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR441_01865 PF00355 Rieske [2Fe-2S] domain JR441_01870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JR441_01870 PF04324 BFD-like [2Fe-2S] binding domain JR441_01870 PF18267 Rubredoxin NAD+ reductase C-terminal domain JR441_01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_01870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JR441_01875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR441_01875 PF00384 Molybdopterin oxidoreductase JR441_01875 PF01568 Molydopterin dinucleotide binding domain JR441_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_01880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JR441_01880 PF18267 Rubredoxin NAD+ reductase C-terminal domain JR441_01880 PF04324 BFD-like [2Fe-2S] binding domain JR441_01885 PF07690 Major Facilitator Superfamily JR441_01890 PF02649 Type I GTP cyclohydrolase folE2 JR441_01905 PF07683 Cobalamin synthesis protein cobW C-terminal domain JR441_01905 PF02492 CobW/HypB/UreG, nucleotide-binding domain JR441_01910 PF00528 Binding-protein-dependent transport system inner membrane component JR441_01915 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR441_01925 PF06271 RDD family JR441_01930 PF10925 Protein of unknown function (DUF2680) JR441_01935 PF00232 Glycosyl hydrolase family 1 JR441_01940 PF11033 Competence protein J (ComJ) JR441_01945 PF14040 Deoxyribonuclease NucA/NucB JR441_01950 PF17202 Single cache domain 3 JR441_01950 PF00672 HAMP domain JR441_01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_01955 PF01380 SIS domain JR441_01960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JR441_01965 PF01638 HxlR-like helix-turn-helix JR441_01970 PF13193 AMP-binding enzyme C-terminal domain JR441_01970 PF00550 Phosphopantetheine attachment site JR441_01970 PF00668 Condensation domain JR441_01970 PF00501 AMP-binding enzyme JR441_01975 PF00668 Condensation domain JR441_01975 PF00550 Phosphopantetheine attachment site JR441_01975 PF13193 AMP-binding enzyme C-terminal domain JR441_01975 PF00501 AMP-binding enzyme JR441_01980 PF00550 Phosphopantetheine attachment site JR441_01980 PF00975 Thioesterase domain JR441_01980 PF13193 AMP-binding enzyme C-terminal domain JR441_01980 PF00501 AMP-binding enzyme JR441_01980 PF00668 Condensation domain JR441_01985 PF00975 Thioesterase domain JR441_01995 PF14317 YcxB-like protein JR441_02000 PF00892 EamA-like transporter family JR441_02005 PF00155 Aminotransferase class I and II JR441_02005 PF00392 Bacterial regulatory proteins, gntR family JR441_02010 PF01648 4'-phosphopantetheinyl transferase superfamily JR441_02020 PF00005 ABC transporter JR441_02025 PF00528 Binding-protein-dependent transport system inner membrane component JR441_02030 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR441_02035 PF03466 LysR substrate binding domain JR441_02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_02040 PF02441 Flavoprotein JR441_02045 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JR441_02060 PF00561 alpha/beta hydrolase fold JR441_02065 PF00854 POT family JR441_02070 PF12708 Pectate lyase superfamily protein JR441_02070 PF13229 Right handed beta helix region JR441_02080 PF03323 Bacillus/Clostridium GerA spore germination protein JR441_02085 PF05504 Spore germination B3/ GerAC like, C-terminal JR441_02090 PF03845 Spore germination protein JR441_02095 PF00005 ABC transporter JR441_02100 PF12704 MacB-like periplasmic core domain JR441_02100 PF02687 FtsX-like permease family JR441_02105 PF00486 Transcriptional regulatory protein, C terminal JR441_02105 PF00072 Response regulator receiver domain JR441_02110 PF00512 His Kinase A (phospho-acceptor) domain JR441_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_02110 PF00672 HAMP domain JR441_02115 PF18801 response regulator aspartate phosphatase H, N terminal JR441_02120 PF11131 Rap-phr extracellular signalling JR441_02125 PF09680 Family of unknown function JR441_02130 PF09680 Family of unknown function JR441_02135 PF00696 Amino acid kinase family JR441_02135 PF13840 ACT domain JR441_02140 PF01032 FecCD transport family JR441_02145 PF01032 FecCD transport family JR441_02150 PF00005 ABC transporter JR441_02155 PF01497 Periplasmic binding protein JR441_02160 PF07690 Major Facilitator Superfamily JR441_02165 PF00440 Bacterial regulatory proteins, tetR family JR441_02170 PF00881 Nitroreductase family JR441_02175 PF03992 Antibiotic biosynthesis monooxygenase JR441_02180 PF01022 Bacterial regulatory protein, arsR family JR441_02185 PF00392 Bacterial regulatory proteins, gntR family JR441_02185 PF00155 Aminotransferase class I and II JR441_02190 PF00202 Aminotransferase class-III JR441_02195 PF00171 Aldehyde dehydrogenase family JR441_02205 PF00005 ABC transporter JR441_02220 PF06800 Sugar transport protein JR441_02230 PF07987 Domain of unkown function (DUF1775) JR441_02235 PF05425 Copper resistance protein D JR441_02235 PF13115 YtkA-like JR441_02235 PF04234 CopC domain JR441_02240 PF08220 DeoR-like helix-turn-helix domain JR441_02240 PF05573 NosL JR441_02250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR441_02250 PF02378 Phosphotransferase system, EIIC JR441_02255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR441_02260 PF01232 Mannitol dehydrogenase Rossmann domain JR441_02260 PF08125 Mannitol dehydrogenase C-terminal domain JR441_02265 PF00180 Isocitrate/isopropylmalate dehydrogenase JR441_02270 PF10502 Signal peptidase, peptidase S26 JR441_02275 PF01738 Dienelactone hydrolase family JR441_02280 PF07977 FabA-like domain JR441_02295 PF03746 LamB/YcsF family JR441_02300 PF01566 Natural resistance-associated macrophage protein JR441_02305 PF07286 Protein of unknown function (DUF1445) JR441_02310 PF02682 Carboxyltransferase domain, subdomain C and D JR441_02315 PF02626 Carboxyltransferase domain, subdomain A and B JR441_02320 PF01614 Bacterial transcriptional regulator JR441_02320 PF09339 IclR helix-turn-helix domain JR441_02325 PF13472 GDSL-like Lipase/Acylhydrolase family JR441_02330 PF13129 Protein of unknown function (DUF3953) JR441_02335 PF03992 Antibiotic biosynthesis monooxygenase JR441_02340 PF03717 Penicillin-binding Protein dimerisation domain JR441_02340 PF00905 Penicillin binding protein transpeptidase domain JR441_02340 PF05223 NTF2-like N-terminal transpeptidase domain JR441_02345 PF00248 Aldo/keto reductase family JR441_02350 PF08279 HTH domain JR441_02350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR441_02350 PF00874 PRD domain JR441_02350 PF05043 Mga helix-turn-helix domain JR441_02350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR441_02355 PF00501 AMP-binding enzyme JR441_02355 PF13193 AMP-binding enzyme C-terminal domain JR441_02360 PF13649 Methyltransferase domain JR441_02375 PF13302 Acetyltransferase (GNAT) domain JR441_02380 PF16242 Pyridoxamine 5'-phosphate oxidase like JR441_02385 PF10997 Alternate to MurJ JR441_02390 PF12823 Domain of unknown function (DUF3817) JR441_02395 PF01037 Lrp/AsnC ligand binding domain JR441_02400 PF01131 DNA topoisomerase JR441_02400 PF01751 Toprim domain JR441_02410 PF00990 Diguanylate cyclase, GGDEF domain JR441_02415 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JR441_02425 PF03170 Bacterial cellulose synthase subunit JR441_02430 PF13520 Amino acid permease JR441_02435 PF00293 NUDIX domain JR441_02440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR441_02440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR441_02440 PF00205 Thiamine pyrophosphate enzyme, central domain JR441_02455 PF01566 Natural resistance-associated macrophage protein JR441_02460 PF04226 Transglycosylase associated protein JR441_02465 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JR441_02470 PF12787 EcsC protein family JR441_02475 PF10685 Stress-induced bacterial acidophilic repeat motif JR441_02475 PF00477 Small hydrophilic plant seed protein JR441_02480 PF07883 Cupin domain JR441_02485 PF16291 Domain of unknown function (DUF4937 JR441_02490 PF05067 Manganese containing catalase JR441_02495 PF03480 Bacterial extracellular solute-binding protein, family 7 JR441_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_02500 PF17203 Single cache domain 3 JR441_02500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JR441_02505 PF08279 HTH domain JR441_02505 PF00072 Response regulator receiver domain JR441_02510 PF00375 Sodium:dicarboxylate symporter family JR441_02515 PF01594 AI-2E family transporter JR441_02520 PF00005 ABC transporter JR441_02535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR441_02535 PF02770 Acyl-CoA dehydrogenase, middle domain JR441_02535 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JR441_02540 PF13040 Fur-regulated basic protein B JR441_02550 PF16916 Dimerisation domain of Zinc Transporter JR441_02550 PF01545 Cation efflux family JR441_02555 PF00085 Thioredoxin JR441_02560 PF07478 D-ala D-ala ligase C-terminus JR441_02560 PF01820 D-ala D-ala ligase N-terminus JR441_02565 PF08245 Mur ligase middle domain JR441_02565 PF02875 Mur ligase family, glutamate ligase domain JR441_02565 PF01225 Mur ligase family, catalytic domain JR441_02570 PF00270 DEAD/DEAH box helicase JR441_02570 PF00271 Helicase conserved C-terminal domain JR441_02575 PF03703 Bacterial PH domain JR441_02580 PF03703 Bacterial PH domain JR441_02585 PF01694 Rhomboid family JR441_02590 PF01648 4'-phosphopantetheinyl transferase superfamily JR441_02600 PF00842 Alanine racemase, C-terminal domain JR441_02600 PF01168 Alanine racemase, N-terminal domain JR441_02605 PF01402 Ribbon-helix-helix protein, copG family JR441_02610 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JR441_02615 PF08678 Rsbr N terminal JR441_02615 PF01740 STAS domain JR441_02620 PF01740 STAS domain JR441_02625 PF13581 Histidine kinase-like ATPase domain JR441_02630 PF07228 Stage II sporulation protein E (SpoIIE) JR441_02630 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JR441_02635 PF01740 STAS domain JR441_02640 PF13581 Histidine kinase-like ATPase domain JR441_02645 PF04539 Sigma-70 region 3 JR441_02645 PF04545 Sigma-70, region 4 JR441_02645 PF04542 Sigma-70 region 2 JR441_02650 PF07228 Stage II sporulation protein E (SpoIIE) JR441_02655 PF16921 Tex protein YqgF-like domain JR441_02655 PF00575 S1 RNA binding domain JR441_02655 PF09371 Tex-like protein N-terminal domain JR441_02655 PF17674 HHH domain JR441_02665 PF17283 SprT-like zinc ribbon domain JR441_02665 PF10263 SprT-like family JR441_02705 PF13302 Acetyltransferase (GNAT) domain JR441_02715 PF04740 LXG domain of WXG superfamily JR441_02715 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JR441_02720 PF01381 Helix-turn-helix JR441_02730 PF00487 Fatty acid desaturase JR441_02735 PF00313 'Cold-shock' DNA-binding domain JR441_02740 PF02559 CarD-like/TRCF domain JR441_02745 PF00892 EamA-like transporter family JR441_02750 PF12833 Helix-turn-helix domain JR441_02750 PF02311 AraC-like ligand binding domain JR441_02755 PF00892 EamA-like transporter family JR441_02760 PF12833 Helix-turn-helix domain JR441_02760 PF06445 GyrI-like small molecule binding domain JR441_02765 PF00392 Bacterial regulatory proteins, gntR family JR441_02765 PF00155 Aminotransferase class I and II JR441_02770 PF07690 Major Facilitator Superfamily JR441_02780 PF08818 Domain of unknown function (DU1801) JR441_02795 PF00381 PTS HPr component phosphorylation site JR441_02800 PF00440 Bacterial regulatory proteins, tetR family JR441_02805 PF00892 EamA-like transporter family JR441_02810 PF00392 Bacterial regulatory proteins, gntR family JR441_02810 PF00155 Aminotransferase class I and II JR441_02815 PF01575 MaoC like domain JR441_02820 PF06821 Serine hydrolase JR441_02825 PF01638 HxlR-like helix-turn-helix JR441_02830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JR441_02830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JR441_02835 PF07690 Major Facilitator Superfamily JR441_02840 PF00440 Bacterial regulatory proteins, tetR family JR441_02840 PF16859 Tetracyclin repressor-like, C-terminal domain JR441_02845 PF01022 Bacterial regulatory protein, arsR family JR441_02850 PF02040 Arsenical pump membrane protein JR441_02860 PF12746 GNAT acetyltransferase JR441_02865 PF00892 EamA-like transporter family JR441_02870 PF00392 Bacterial regulatory proteins, gntR family JR441_02870 PF00155 Aminotransferase class I and II JR441_02875 PF01613 Flavin reductase like domain JR441_02885 PF02627 Carboxymuconolactone decarboxylase family JR441_02900 PF07730 Histidine kinase JR441_02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_02905 PF00196 Bacterial regulatory proteins, luxR family JR441_02905 PF00072 Response regulator receiver domain JR441_02910 PF03176 MMPL family JR441_02915 PF12697 Alpha/beta hydrolase family JR441_02920 PF04474 Protein of unknown function (DUF554) JR441_02925 PF13411 MerR HTH family regulatory protein JR441_02925 PF06445 GyrI-like small molecule binding domain JR441_02930 PF01545 Cation efflux family JR441_02930 PF16916 Dimerisation domain of Zinc Transporter JR441_02935 PF00881 Nitroreductase family JR441_02940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_02945 PF07681 DoxX JR441_02950 PF00085 Thioredoxin JR441_02955 PF10676 Spore germination protein gerPA/gerPF JR441_02960 PF10676 Spore germination protein gerPA/gerPF JR441_02965 PF04239 Protein of unknown function (DUF421) JR441_02970 PF04239 Protein of unknown function (DUF421) JR441_02975 PF00011 Hsp20/alpha crystallin family JR441_02980 PF10676 Spore germination protein gerPA/gerPF JR441_02985 PF10676 Spore germination protein gerPA/gerPF JR441_02990 PF00440 Bacterial regulatory proteins, tetR family JR441_02995 PF13564 DoxX-like family JR441_03000 PF00583 Acetyltransferase (GNAT) family JR441_03005 PF12848 ABC transporter JR441_03005 PF00005 ABC transporter JR441_03010 PF00324 Amino acid permease JR441_03015 PF05163 DinB family JR441_03020 PF01047 MarR family JR441_03025 PF03176 MMPL family JR441_03030 PF00881 Nitroreductase family JR441_03035 PF01047 MarR family JR441_03040 PF07690 Major Facilitator Superfamily JR441_03045 PF01925 Sulfite exporter TauE/SafE JR441_03050 PF07729 FCD domain JR441_03050 PF00392 Bacterial regulatory proteins, gntR family JR441_03055 PF01476 LysM domain JR441_03055 PF00704 Glycosyl hydrolases family 18 JR441_03060 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JR441_03065 PF11611 Domain of unknown function (DUF4352) JR441_03065 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JR441_03070 PF00245 Alkaline phosphatase JR441_03075 PF08818 Domain of unknown function (DU1801) JR441_03080 PF16302 Domain of unknown function (DUF4944) JR441_03085 PF00583 Acetyltransferase (GNAT) family JR441_03090 PF01966 HD domain JR441_03095 PF07563 Protein of unknown function (DUF1541) JR441_03100 PF07690 Major Facilitator Superfamily JR441_03105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR441_03110 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JR441_03115 PF02378 Phosphotransferase system, EIIC JR441_03120 PF00232 Glycosyl hydrolase family 1 JR441_03125 PF07702 UTRA domain JR441_03125 PF00392 Bacterial regulatory proteins, gntR family JR441_03130 PF00480 ROK family JR441_03135 PF01238 Phosphomannose isomerase type I JR441_03140 PF02156 Glycosyl hydrolase family 26 JR441_03185 PF02769 AIR synthase related protein, C-terminal domain JR441_03185 PF00586 AIR synthase related protein, N-terminal domain JR441_03190 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JR441_03195 PF00814 Glycoprotease family JR441_03200 PF00583 Acetyltransferase (GNAT) family JR441_03205 PF00814 Glycoprotease family JR441_03210 PF00005 ABC transporter JR441_03210 PF12848 ABC transporter JR441_03210 PF16326 ABC transporter C-terminal domain JR441_03215 PF01967 MoaC family JR441_03220 PF02629 CoA binding domain JR441_03220 PF06971 Putative DNA-binding protein N-terminus JR441_03225 PF02416 mttA/Hcf106 family JR441_03230 PF00902 Sec-independent protein translocase protein (TatC) JR441_03235 PF14146 Domain of unknown function (DUF4305) JR441_03240 PF02517 CPBP intramembrane metalloprotease JR441_03245 PF00166 Chaperonin 10 Kd subunit JR441_03250 PF00118 TCP-1/cpn60 chaperonin family JR441_03255 PF01555 DNA methylase JR441_03270 PF00931 NB-ARC domain JR441_03270 PF13176 Tetratricopeptide repeat JR441_03275 PF00107 Zinc-binding dehydrogenase JR441_03275 PF08240 Alcohol dehydrogenase GroES-like domain JR441_03285 PF00294 pfkB family carbohydrate kinase JR441_03290 PF04012 PspA/IM30 family JR441_03295 PF08271 TFIIB zinc-binding JR441_03300 PF04536 TPM domain JR441_03305 PF13421 SPFH domain-Band 7 family JR441_03310 PF07885 Ion channel JR441_03315 PF00083 Sugar (and other) transporter JR441_03320 PF00107 Zinc-binding dehydrogenase JR441_03320 PF08240 Alcohol dehydrogenase GroES-like domain JR441_03325 PF03330 Lytic transglycolase JR441_03330 PF07676 WD40-like Beta Propeller Repeat JR441_03340 PF14169 Cold-inducible protein YdjO JR441_03345 PF12697 Alpha/beta hydrolase family JR441_03350 PF13170 Protein of unknown function (DUF4003) JR441_03355 PF07731 Multicopper oxidase JR441_03355 PF07732 Multicopper oxidase JR441_03355 PF00394 Multicopper oxidase JR441_03360 PF00324 Amino acid permease JR441_03370 PF01545 Cation efflux family JR441_03370 PF16916 Dimerisation domain of Zinc Transporter JR441_03375 PF17863 AAA lid domain JR441_03375 PF07726 ATPase family associated with various cellular activities (AAA) JR441_03380 PF01882 Protein of unknown function DUF58 JR441_03385 PF11992 Domain of unknown function (DUF3488) JR441_03385 PF01841 Transglutaminase-like superfamily JR441_03385 PF13559 Domain of unknown function (DUF4129) JR441_03390 PF00117 Glutamine amidotransferase class-I JR441_03390 PF02540 NAD synthase JR441_03390 PF00958 GMP synthase C terminal domain JR441_03395 PF04542 Sigma-70 region 2 JR441_03395 PF04545 Sigma-70, region 4 JR441_03405 PF00860 Permease family JR441_03415 PF13076 Fur-regulated basic protein A JR441_03420 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JR441_03425 PF14044 NETI protein JR441_03430 PF00731 AIR carboxylase JR441_03435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JR441_03435 PF02222 ATP-grasp domain JR441_03440 PF00206 Lyase JR441_03440 PF10397 Adenylosuccinate lyase C-terminus JR441_03445 PF01259 SAICAR synthetase JR441_03450 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JR441_03460 PF02769 AIR synthase related protein, C-terminal domain JR441_03460 PF00586 AIR synthase related protein, N-terminal domain JR441_03460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JR441_03465 PF00156 Phosphoribosyl transferase domain JR441_03470 PF00586 AIR synthase related protein, N-terminal domain JR441_03470 PF02769 AIR synthase related protein, C-terminal domain JR441_03475 PF00551 Formyl transferase JR441_03480 PF02142 MGS-like domain JR441_03480 PF01808 AICARFT/IMPCHase bienzyme JR441_03485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JR441_03485 PF02844 Phosphoribosylglycinamide synthetase, N domain JR441_03485 PF02843 Phosphoribosylglycinamide synthetase, C domain JR441_03490 PF01037 Lrp/AsnC ligand binding domain JR441_03495 PF13520 Amino acid permease JR441_03500 PF11127 Protein of unknown function (DUF2892) JR441_03505 PF13382 Adenine deaminase C-terminal domain JR441_03505 PF01979 Amidohydrolase family JR441_03510 PF17479 Protein of unknown function (DUF3048) C-terminal domain JR441_03510 PF11258 Protein of unknown function (DUF3048) N-terminal domain JR441_03515 PF01371 Trp repressor protein JR441_03520 PF01645 Conserved region in glutamate synthase JR441_03525 PF01884 PcrB family JR441_03530 PF00580 UvrD/REP helicase N-terminal domain JR441_03530 PF13361 UvrD-like helicase C-terminal domain JR441_03535 PF00533 BRCA1 C Terminus (BRCT) domain JR441_03535 PF03120 NAD-dependent DNA ligase OB-fold domain JR441_03535 PF12826 Helix-hairpin-helix motif JR441_03535 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JR441_03535 PF01653 NAD-dependent DNA ligase adenylation domain JR441_03540 PF07537 CamS sex pheromone cAM373 precursor JR441_03545 PF01636 Phosphotransferase enzyme family JR441_03550 PF02308 MgtC family JR441_03555 PF00474 Sodium:solute symporter family JR441_03560 PF02686 Glu-tRNAGln amidotransferase C subunit JR441_03565 PF01425 Amidase JR441_03570 PF02934 GatB/GatE catalytic domain JR441_03570 PF02637 GatB domain JR441_03575 PF00440 Bacterial regulatory proteins, tetR family JR441_03580 PF00873 AcrB/AcrD/AcrF family JR441_03585 PF00781 Diacylglycerol kinase catalytic domain JR441_03590 PF05958 tRNA (Uracil-5-)-methyltransferase JR441_03590 PF01938 TRAM domain JR441_03630 PF18801 response regulator aspartate phosphatase H, N terminal JR441_03630 PF13176 Tetratricopeptide repeat JR441_03640 PF01709 Transcriptional regulator JR441_03650 PF11007 Spore coat associated protein JA (CotJA) JR441_03655 PF12652 CotJB protein JR441_03660 PF05067 Manganese containing catalase JR441_03665 PF00583 Acetyltransferase (GNAT) family JR441_03675 PF04854 Protein of unknown function, DUF624 JR441_03680 PF00672 HAMP domain JR441_03680 PF06580 Histidine kinase JR441_03680 PF02743 Cache domain JR441_03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_03685 PF00072 Response regulator receiver domain JR441_03685 PF12833 Helix-turn-helix domain JR441_03690 PF13416 Bacterial extracellular solute-binding protein JR441_03695 PF00528 Binding-protein-dependent transport system inner membrane component JR441_03700 PF00528 Binding-protein-dependent transport system inner membrane component JR441_03705 PF07470 Glycosyl Hydrolase Family 88 JR441_03710 PF12833 Helix-turn-helix domain JR441_03715 PF13472 GDSL-like Lipase/Acylhydrolase family JR441_03720 PF09224 Domain of unknown function (DUF1961) JR441_03725 PF04854 Protein of unknown function, DUF624 JR441_03730 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JR441_03735 PF18370 Rhamnogalacturonan I lyases beta-sheet domain JR441_03735 PF01839 FG-GAP repeat JR441_03740 PF00657 GDSL-like Lipase/Acylhydrolase JR441_03745 PF08532 Beta-galactosidase trimerisation domain JR441_03745 PF08533 Beta-galactosidase C-terminal domain JR441_03745 PF02449 Beta-galactosidase JR441_03755 PF01547 Bacterial extracellular solute-binding protein JR441_03760 PF00528 Binding-protein-dependent transport system inner membrane component JR441_03765 PF00528 Binding-protein-dependent transport system inner membrane component JR441_03770 PF02056 Family 4 glycosyl hydrolase JR441_03770 PF11975 Family 4 glycosyl hydrolase C-terminal domain JR441_03775 PF04239 Protein of unknown function (DUF421) JR441_03780 PF03992 Antibiotic biosynthesis monooxygenase JR441_03785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_03795 PF01740 STAS domain JR441_03800 PF10055 Uncharacterized small protein (DUF2292) JR441_03805 PF01027 Inhibitor of apoptosis-promoting Bax1 JR441_03820 PF13037 Domain of unknown function (DUF3898) JR441_03820 PF13039 Protein of unknown function (DUF3900) JR441_03825 PF00667 FAD binding domain JR441_03825 PF00258 Flavodoxin JR441_03825 PF00175 Oxidoreductase NAD-binding domain JR441_03825 PF00067 Cytochrome P450 JR441_03830 PF00884 Sulfatase JR441_03835 PF00483 Nucleotidyl transferase JR441_03840 PF16363 GDP-mannose 4,6 dehydratase JR441_03845 PF03407 Nucleotide-diphospho-sugar transferase JR441_03850 PF00535 Glycosyl transferase family 2 JR441_03855 PF03407 Nucleotide-diphospho-sugar transferase JR441_03860 PF07690 Major Facilitator Superfamily JR441_03865 PF13419 Haloacid dehalogenase-like hydrolase JR441_03870 PF13520 Amino acid permease JR441_03875 PF00171 Aldehyde dehydrogenase family JR441_03880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_03885 PF12848 ABC transporter JR441_03885 PF00005 ABC transporter JR441_03885 PF16326 ABC transporter C-terminal domain JR441_03890 PF10787 Uncharacterised protein from bacillus cereus group JR441_03895 PF13411 MerR HTH family regulatory protein JR441_03900 PF07690 Major Facilitator Superfamily JR441_03910 PF12848 ABC transporter JR441_03910 PF00005 ABC transporter JR441_03915 PF00271 Helicase conserved C-terminal domain JR441_03915 PF00270 DEAD/DEAH box helicase JR441_03920 PF00583 Acetyltransferase (GNAT) family JR441_03925 PF00107 Zinc-binding dehydrogenase JR441_03925 PF16884 N-terminal domain of oxidoreductase JR441_03930 PF00005 ABC transporter JR441_03935 PF01032 FecCD transport family JR441_03940 PF01032 FecCD transport family JR441_03945 PF01497 Periplasmic binding protein JR441_03950 PF11486 Protein of unknown function (DUF3212) JR441_03955 PF11181 Heat induced stress protein YflT JR441_03960 PF00544 Pectate lyase JR441_03965 PF00939 Sodium:sulfate symporter transmembrane region JR441_03970 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JR441_03970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_03975 PF12431 Transcriptional regulator JR441_03975 PF08279 HTH domain JR441_03975 PF00072 Response regulator receiver domain JR441_03980 PF03401 Tripartite tricarboxylate transporter family receptor JR441_03985 PF03600 Citrate transporter JR441_03990 PF00753 Metallo-beta-lactamase superfamily JR441_03995 PF02898 Nitric oxide synthase, oxygenase domain JR441_04000 PF00708 Acylphosphatase JR441_04005 PF03475 3-alpha domain JR441_04005 PF03473 MOSC domain JR441_04010 PF11121 Protein of unknown function (DUF2639) JR441_04025 PF00557 Metallopeptidase family M24 JR441_04030 PF02378 Phosphotransferase system, EIIC JR441_04030 PF00367 phosphotransferase system, EIIB JR441_04035 PF00884 Sulfatase JR441_04045 PF09350 Domain of unknown function (DUF1992) JR441_04050 PF01235 Sodium:alanine symporter family JR441_04055 PF03845 Spore germination protein JR441_04065 PF05504 Spore germination B3/ GerAC like, C-terminal JR441_04070 PF03323 Bacillus/Clostridium GerA spore germination protein JR441_04075 PF02378 Phosphotransferase system, EIIC JR441_04075 PF00367 phosphotransferase system, EIIB JR441_04080 PF00128 Alpha amylase, catalytic domain JR441_04080 PF16657 Maltogenic Amylase, C-terminal domain JR441_04085 PF07702 UTRA domain JR441_04085 PF00392 Bacterial regulatory proteins, gntR family JR441_04090 PF00881 Nitroreductase family JR441_04095 PF00149 Calcineurin-like phosphoesterase JR441_04095 PF02872 5'-nucleotidase, C-terminal domain JR441_04100 PF01965 DJ-1/PfpI family JR441_04105 PF07690 Major Facilitator Superfamily JR441_04110 PF06569 Protein of unknown function (DUF1128) JR441_04115 PF01451 Low molecular weight phosphotyrosine protein phosphatase JR441_04125 PF03631 Virulence factor BrkB JR441_04130 PF07690 Major Facilitator Superfamily JR441_04135 PF01699 Sodium/calcium exchanger protein JR441_04140 PF14167 YfkD-like protein JR441_04145 PF00924 Mechanosensitive ion channel JR441_04150 PF08756 YfkB-like domain JR441_04150 PF04055 Radical SAM superfamily JR441_04160 PF01522 Polysaccharide deacetylase JR441_04165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR441_04165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JR441_04170 PF01544 CorA-like Mg2+ transporter protein JR441_04175 PF00730 HhH-GPD superfamily base excision DNA repair protein JR441_04180 PF05958 tRNA (Uracil-5-)-methyltransferase JR441_04180 PF01938 TRAM domain JR441_04185 PF14118 YfzA-like protein JR441_04190 PF01207 Dihydrouridine synthase (Dus) JR441_04200 PF00676 Dehydrogenase E1 component JR441_04205 PF02780 Transketolase, C-terminal domain JR441_04205 PF02779 Transketolase, pyrimidine binding domain JR441_04210 PF00364 Biotin-requiring enzyme JR441_04210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR441_04210 PF02817 e3 binding domain JR441_04215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR441_04215 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_04220 PF00158 Sigma-54 interaction domain JR441_04220 PF01590 GAF domain JR441_04220 PF02954 Bacterial regulatory protein, Fis family JR441_04225 PF08141 Small acid-soluble spore protein H family JR441_04230 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JR441_04235 PF17353 Family of unknown function (DUF5381) JR441_04240 PF17353 Family of unknown function (DUF5381) JR441_04255 PF06013 Proteins of 100 residues with WXG JR441_04260 PF11975 Family 4 glycosyl hydrolase C-terminal domain JR441_04260 PF02056 Family 4 glycosyl hydrolase JR441_04265 PF01418 Helix-turn-helix domain, rpiR family JR441_04265 PF01380 SIS domain JR441_04270 PF02378 Phosphotransferase system, EIIC JR441_04270 PF00367 phosphotransferase system, EIIB JR441_04275 PF12708 Pectate lyase superfamily protein JR441_04275 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain JR441_04280 PF00664 ABC transporter transmembrane region JR441_04280 PF00005 ABC transporter JR441_04285 PF00664 ABC transporter transmembrane region JR441_04285 PF00005 ABC transporter JR441_04290 PF07681 DoxX JR441_04295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_04300 PF07730 Histidine kinase JR441_04305 PF00196 Bacterial regulatory proteins, luxR family JR441_04305 PF00072 Response regulator receiver domain JR441_04310 PF00005 ABC transporter JR441_04325 PF10400 Virulence activator alpha C-term JR441_04325 PF03551 Transcriptional regulator PadR-like family JR441_04335 PF01757 Acyltransferase family JR441_04340 PF17922 Tetracyclin repressor-like, C-terminal domain JR441_04340 PF00440 Bacterial regulatory proteins, tetR family JR441_04345 PF07690 Major Facilitator Superfamily JR441_04350 PF12867 DinB superfamily JR441_04355 PF07690 Major Facilitator Superfamily JR441_04360 PF01047 MarR family JR441_04365 PF09924 Uncharacterised conserved protein (DUF2156) JR441_04365 PF03706 Lysylphosphatidylglycerol synthase TM region JR441_04370 PF01497 Periplasmic binding protein JR441_04375 PF01032 FecCD transport family JR441_04380 PF01032 FecCD transport family JR441_04385 PF02567 Phenazine biosynthesis-like protein JR441_04390 PF00881 Nitroreductase family JR441_04395 PF14151 YfhD-like protein JR441_04400 PF14152 YfhE-like protein JR441_04405 PF08338 Domain of unknown function (DUF1731) JR441_04405 PF01370 NAD dependent epimerase/dehydratase family JR441_04410 PF02631 RecX family JR441_04415 PF08838 Protein of unknown function (DUF1811) JR441_04420 PF07690 Major Facilitator Superfamily JR441_04425 PF08176 Small acid-soluble spore protein K family JR441_04430 PF14043 WVELL protein JR441_04435 PF08239 Bacterial SH3 domain JR441_04440 PF13630 SdpI/YhfL protein family JR441_04445 PF00561 alpha/beta hydrolase fold JR441_04450 PF00535 Glycosyl transferase family 2 JR441_04455 PF09586 Bacterial membrane protein YfhO JR441_04460 PF04307 LexA-binding, inner membrane-associated putative hydrolase JR441_04465 PF00730 HhH-GPD superfamily base excision DNA repair protein JR441_04465 PF14815 NUDIX domain JR441_04480 PF04259 Small, acid-soluble spore protein, gamma-type JR441_04485 PF14182 YgaB-like protein JR441_04490 PF04167 Protein of unknown function (DUF402) JR441_04495 PF00005 ABC transporter JR441_04495 PF00664 ABC transporter transmembrane region JR441_04500 PF06081 Aromatic acid exporter family member 1 JR441_04505 PF00202 Aminotransferase class-III JR441_04510 PF00578 AhpC/TSA family JR441_04515 PF01475 Ferric uptake regulator family JR441_04520 PF11023 Zinc-ribbon containing domain JR441_04525 PF14540 Nucleotidyltransferase-like JR441_04525 PF18576 Helix-turn-helix domain JR441_04625 PF07070 SpoOM protein JR441_04635 PF07875 Coat F domain JR441_04645 PF13667 ThiC-associated domain JR441_04645 PF01964 Radical SAM ThiC family JR441_04650 PF01565 FAD binding domain JR441_04650 PF08031 Berberine and berberine like JR441_04655 PF13040 Fur-regulated basic protein B JR441_04660 PF00199 Catalase JR441_04660 PF06628 Catalase-related immune-responsive JR441_04665 PF00005 ABC transporter JR441_04670 PF09084 NMT1/THI5 like JR441_04675 PF00528 Binding-protein-dependent transport system inner membrane component JR441_04680 PF00296 Luciferase-like monooxygenase JR441_04690 PF00253 Ribosomal protein S14p/S29e JR441_04700 PF01381 Helix-turn-helix JR441_04715 PF08331 Domain of unknown function (DUF1730) JR441_04720 PF12671 Putative amidase domain JR441_04725 PF00588 SpoU rRNA Methylase family JR441_04730 PF13171 Protein of unknown function (DUF4004) JR441_04745 PF06798 PrkA serine protein kinase C-terminal domain JR441_04745 PF08298 PrkA AAA domain JR441_04750 PF04285 Protein of unknown function (DUF444) JR441_04755 PF01047 MarR family JR441_04765 PF07690 Major Facilitator Superfamily JR441_04770 PF03358 NADPH-dependent FMN reductase JR441_04790 PF00392 Bacterial regulatory proteins, gntR family JR441_04795 PF00005 ABC transporter JR441_04800 PF00005 ABC transporter JR441_04805 PF12679 ABC-2 family transporter protein JR441_04810 PF00313 'Cold-shock' DNA-binding domain JR441_04815 PF03180 NLPA lipoprotein JR441_04820 PF00990 Diguanylate cyclase, GGDEF domain JR441_04820 PF07694 5TMR of 5TMR-LYT JR441_04825 PF00375 Sodium:dicarboxylate symporter family JR441_04835 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JR441_04845 PF07875 Coat F domain JR441_04850 PF02872 5'-nucleotidase, C-terminal domain JR441_04850 PF00746 LPXTG cell wall anchor motif JR441_04850 PF00149 Calcineurin-like phosphoesterase JR441_04850 PF00565 Staphylococcal nuclease homologue JR441_04855 PF04203 Sortase domain JR441_04860 PF01479 S4 domain JR441_04860 PF00849 RNA pseudouridylate synthase JR441_04865 PF17326 Family of unknown function (DUF5365) JR441_04870 PF00571 CBS domain JR441_04875 PF13419 Haloacid dehalogenase-like hydrolase JR441_04880 PF00583 Acetyltransferase (GNAT) family JR441_04880 PF00795 Carbon-nitrogen hydrolase JR441_04885 PF00202 Aminotransferase class-III JR441_04890 PF04309 Glycerol-3-phosphate responsive antiterminator JR441_04895 PF00230 Major intrinsic protein JR441_04900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR441_04900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR441_04905 PF01266 FAD dependent oxidoreductase JR441_04905 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JR441_04910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JR441_04910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JR441_04910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JR441_04910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JR441_04915 PF07730 Histidine kinase JR441_04915 PF13185 GAF domain JR441_04920 PF00072 Response regulator receiver domain JR441_04920 PF00196 Bacterial regulatory proteins, luxR family JR441_04925 PF03358 NADPH-dependent FMN reductase JR441_04930 PF14148 YhdB-like protein JR441_04935 PF13028 Protein of unknown function (DUF3889) JR441_04940 PF00877 NlpC/P60 family JR441_04940 PF01476 LysM domain JR441_04945 PF02082 Transcriptional regulator JR441_04950 PF05552 Conserved TM helix JR441_04955 PF04293 SpoVR like protein JR441_04960 PF00245 Alkaline phosphatase JR441_04965 PF00877 NlpC/P60 family JR441_04965 PF01476 LysM domain JR441_04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_04970 PF03466 LysR substrate binding domain JR441_04975 PF00285 Citrate synthase, C-terminal domain JR441_04985 PF13520 Amino acid permease JR441_04990 PF00209 Sodium:neurotransmitter symporter family JR441_05000 PF00583 Acetyltransferase (GNAT) family JR441_05005 PF17453 Sigma-M inhibitor JR441_05010 PF13800 Sigma factor regulator N-terminal JR441_05010 PF13791 Sigma factor regulator C-terminal JR441_05015 PF08281 Sigma-70, region 4 JR441_05015 PF04542 Sigma-70 region 2 JR441_05020 PF00248 Aldo/keto reductase family JR441_05025 PF01553 Acyltransferase JR441_05030 PF01595 Cyclin M transmembrane N-terminal domain JR441_05030 PF03471 Transporter associated domain JR441_05030 PF00571 CBS domain JR441_05035 PF13411 MerR HTH family regulatory protein JR441_05040 PF00155 Aminotransferase class I and II JR441_05045 PF01595 Cyclin M transmembrane N-terminal domain JR441_05045 PF00571 CBS domain JR441_05045 PF03471 Transporter associated domain JR441_05050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JR441_05055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JR441_05060 PF03009 Glycerophosphoryl diester phosphodiesterase family JR441_05065 PF17444 Uncharacterized YhdX-like JR441_05070 PF00924 Mechanosensitive ion channel JR441_05075 PF02146 Sir2 family JR441_05080 PF01522 Polysaccharide deacetylase JR441_05085 PF01063 Amino-transferase class IV JR441_05090 PF03553 Na+/H+ antiporter family JR441_05095 PF00582 Universal stress protein family JR441_05105 PF00664 ABC transporter transmembrane region JR441_05105 PF00005 ABC transporter JR441_05110 PF00664 ABC transporter transmembrane region JR441_05110 PF00005 ABC transporter JR441_05115 PF13460 NAD(P)H-binding JR441_05125 PF00269 Small, acid-soluble spore proteins, alpha/beta type JR441_05130 PF17277 Family of unknown function (DUF5342) JR441_05135 PF14398 YheC/D like ATP-grasp JR441_05140 PF14398 YheC/D like ATP-grasp JR441_05145 PF04286 Protein of unknown function (DUF445) JR441_05150 PF06133 Control of competence regulator ComK, YlbF/YmcA JR441_05155 PF08713 DNA alkylation repair enzyme JR441_05165 PF04055 Radical SAM superfamily JR441_05170 PF00999 Sodium/hydrogen exchanger family JR441_05175 PF02080 TrkA-C domain JR441_05185 PF00378 Enoyl-CoA hydratase/isomerase JR441_05190 PF14120 YhzD-like protein JR441_05195 PF13732 Domain of unknown function (DUF4162) JR441_05195 PF00005 ABC transporter JR441_05205 PF00149 Calcineurin-like phosphoesterase JR441_05210 PF13514 AAA domain JR441_05215 PF01966 HD domain JR441_05220 PF14147 Sporulation protein YhaL JR441_05230 PF09680 Family of unknown function JR441_05235 PF09680 Family of unknown function JR441_05245 PF11667 Putative zincin peptidase JR441_05250 PF08963 Protein of unknown function (DUF1878) JR441_05255 PF01047 MarR family JR441_05260 PF12732 YtxH-like protein JR441_05270 PF17099 Tryptophan transporter TrpP JR441_05275 PF00266 Aminotransferase class-V JR441_05280 PF01230 HIT domain JR441_05285 PF00005 ABC transporter JR441_05290 PF05975 Bacterial ABC transporter protein EcsB JR441_05295 PF12787 EcsC protein family JR441_05300 PF07687 Peptidase dimerisation domain JR441_05300 PF01546 Peptidase family M20/M25/M40 JR441_05315 PF03992 Antibiotic biosynthesis monooxygenase JR441_05320 PF00912 Transglycosylase JR441_05320 PF00905 Penicillin binding protein transpeptidase domain JR441_05325 PF01208 Uroporphyrinogen decarboxylase (URO-D) JR441_05330 PF00762 Ferrochelatase JR441_05335 PF01593 Flavin containing amine oxidoreductase JR441_05340 PF00440 Bacterial regulatory proteins, tetR family JR441_05340 PF17932 Tetracyclin repressor-like, C-terminal domain JR441_05350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JR441_05350 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JR441_05355 PF10086 YhfC intramembrane metalloprotease JR441_05365 PF05343 M42 glutamyl aminopeptidase JR441_05370 PF04266 ASCH domain JR441_05375 PF00375 Sodium:dicarboxylate symporter family JR441_05380 PF14149 YhfH-like protein JR441_05385 PF12706 Beta-lactamase superfamily domain JR441_05390 PF03099 Biotin/lipoate A/B protein ligase family JR441_05390 PF10437 Bacterial lipoate protein ligase C-terminus JR441_05395 PF13460 NAD(P)H-binding JR441_05400 PF13193 AMP-binding enzyme C-terminal domain JR441_05400 PF00501 AMP-binding enzyme JR441_05410 PF01435 Peptidase family M48 JR441_05410 PF16491 CAAX prenyl protease N-terminal, five membrane helices JR441_05415 PF05922 Peptidase inhibitor I9 JR441_05415 PF00082 Subtilase family JR441_05420 PF00583 Acetyltransferase (GNAT) family JR441_05425 PF08240 Alcohol dehydrogenase GroES-like domain JR441_05425 PF00107 Zinc-binding dehydrogenase JR441_05430 PF01497 Periplasmic binding protein JR441_05435 PF00300 Histidine phosphatase superfamily (branch 1) JR441_05440 PF02803 Thiolase, C-terminal domain JR441_05440 PF00108 Thiolase, N-terminal domain JR441_05445 PF13193 AMP-binding enzyme C-terminal domain JR441_05445 PF00501 AMP-binding enzyme JR441_05450 PF02632 BioY family JR441_05455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_05460 PF01266 FAD dependent oxidoreductase JR441_05460 PF00355 Rieske [2Fe-2S] domain JR441_05470 PF08858 IDEAL domain JR441_05475 PF06338 ComK protein JR441_05485 PF05901 Excalibur calcium-binding domain JR441_05490 PF00474 Sodium:solute symporter family JR441_05495 PF11755 Protein of unknown function (DUF3311) JR441_05505 PF09335 SNARE associated Golgi protein JR441_05510 PF10502 Signal peptidase, peptidase S26 JR441_05515 PF01494 FAD binding domain JR441_05520 PF01047 MarR family JR441_05525 PF07690 Major Facilitator Superfamily JR441_05530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR441_05530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR441_05535 PF05116 Sucrose-6F-phosphate phosphohydrolase JR441_05540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JR441_05545 PF00356 Bacterial regulatory proteins, lacI family JR441_05550 PF05145 Transition state regulatory protein AbrB JR441_05555 PF07690 Major Facilitator Superfamily JR441_05560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR441_05560 PF12793 Sugar transport-related sRNA regulator N-term JR441_05565 PF03860 Domain of Unknown Function (DUF326) JR441_05570 PF02915 Rubrerythrin JR441_05575 PF12705 PD-(D/E)XK nuclease superfamily JR441_05575 PF13361 UvrD-like helicase C-terminal domain JR441_05580 PF00580 UvrD/REP helicase N-terminal domain JR441_05580 PF12705 PD-(D/E)XK nuclease superfamily JR441_05580 PF13361 UvrD-like helicase C-terminal domain JR441_05585 PF12320 Type 5 capsule protein repressor C-terminal domain JR441_05585 PF00149 Calcineurin-like phosphoesterase JR441_05590 PF13476 AAA domain JR441_05600 PF10676 Spore germination protein gerPA/gerPF JR441_05605 PF10970 Spore germination protein GerPE JR441_05615 PF10737 Spore germination protein GerPC JR441_05620 PF10803 Spore germination GerPB JR441_05625 PF10676 Spore germination protein gerPA/gerPF JR441_05630 PF09388 Spo0E like sporulation regulatory protein JR441_05635 PF08757 CotH kinase protein JR441_05640 PF01557 Fumarylacetoacetate (FAA) hydrolase family JR441_05645 PF07457 Protein of unknown function (DUF1516) JR441_05650 PF00082 Subtilase family JR441_05650 PF17936 Bacterial Ig domain JR441_05655 PF10949 Protein of unknown function (DUF2777) JR441_05660 PF00733 Asparagine synthase JR441_05660 PF13537 Glutamine amidotransferase domain JR441_05665 PF05163 DinB family JR441_05675 PF01554 MatE JR441_05680 PF02311 AraC-like ligand binding domain JR441_05680 PF12833 Helix-turn-helix domain JR441_05685 PF00356 Bacterial regulatory proteins, lacI family JR441_05690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR441_05690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR441_05695 PF05163 DinB family JR441_05700 PF01810 LysE type translocator JR441_05705 PF00392 Bacterial regulatory proteins, gntR family JR441_05705 PF00155 Aminotransferase class I and II JR441_05710 PF13599 Pentapeptide repeats (9 copies) JR441_05715 PF08386 TAP-like protein JR441_05715 PF00561 alpha/beta hydrolase fold JR441_05725 PF14306 PUA-like domain JR441_05725 PF01747 ATP-sulfurylase JR441_05730 PF01507 Phosphoadenosine phosphosulfate reductase family JR441_05735 PF04029 2-phosphosulpholactate phosphatase JR441_05740 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) JR441_05745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JR441_05750 PF13378 Enolase C-terminal domain-like JR441_05750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR441_05755 PF07690 Major Facilitator Superfamily JR441_05760 PF18014 Acetyltransferase (GNAT) domain JR441_05760 PF13673 Acetyltransferase (GNAT) domain JR441_05765 PF13673 Acetyltransferase (GNAT) domain JR441_05770 PF02219 Methylenetetrahydrofolate reductase JR441_05770 PF02574 Homocysteine S-methyltransferase JR441_05775 PF04461 Protein of unknown function (DUF520) JR441_05780 PF13509 S1 domain JR441_05780 PF17783 CvfB-like winged helix domain JR441_05795 PF17418 Sporulation delaying protein SdpA JR441_05800 PF03551 Transcriptional regulator PadR-like family JR441_05810 PF12650 Domain of unknown function (DUF3784) JR441_05815 PF07504 Fungalysin/Thermolysin Propeptide Motif JR441_05815 PF03413 Peptidase propeptide and YPEB domain JR441_05815 PF02868 Thermolysin metallopeptidase, alpha-helical domain JR441_05815 PF01447 Thermolysin metallopeptidase, catalytic domain JR441_05820 PF02645 Uncharacterised protein, DegV family COG1307 JR441_05825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JR441_05825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JR441_05830 PF12690 Intracellular proteinase inhibitor JR441_05835 PF12758 Protein of unknown function (DUF3813) JR441_05850 PF00326 Prolyl oligopeptidase family JR441_05855 PF01883 Iron-sulfur cluster assembly protein JR441_05865 PF01565 FAD binding domain JR441_05870 PF07690 Major Facilitator Superfamily JR441_05875 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR441_05875 PF02774 Semialdehyde dehydrogenase, dimerisation domain JR441_05880 PF01960 ArgJ family JR441_05885 PF00696 Amino acid kinase family JR441_05890 PF00202 Aminotransferase class-III JR441_05895 PF00117 Glutamine amidotransferase class-I JR441_05895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JR441_05900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR441_05900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JR441_05905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JR441_05905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JR441_05910 PF14168 YjzC-like protein JR441_05915 PF11151 Protein of unknown function (DUF2929) JR441_05930 PF02608 ABC transporter substrate-binding protein PnrA-like JR441_05935 PF10815 ComZ JR441_05945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JR441_05945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JR441_05950 PF00109 Beta-ketoacyl synthase, N-terminal domain JR441_05950 PF02801 Beta-ketoacyl synthase, C-terminal domain JR441_05955 PF10026 Predicted Zn-dependent protease (DUF2268) JR441_05960 PF00005 ABC transporter JR441_05960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR441_05965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR441_05965 PF00005 ABC transporter JR441_05970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR441_05975 PF00528 Binding-protein-dependent transport system inner membrane component JR441_05980 PF00528 Binding-protein-dependent transport system inner membrane component JR441_05980 PF12911 N-terminal TM domain of oligopeptide transport permease C JR441_05985 PF12227 Protein of unknown function (DUF3603) JR441_05990 PF00579 tRNA synthetases class I (W and Y) JR441_05995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR441_06000 PF00528 Binding-protein-dependent transport system inner membrane component JR441_06005 PF12911 N-terminal TM domain of oligopeptide transport permease C JR441_06005 PF00528 Binding-protein-dependent transport system inner membrane component JR441_06010 PF00005 ABC transporter JR441_06010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR441_06015 PF00005 ABC transporter JR441_06015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR441_06020 PF07690 Major Facilitator Superfamily JR441_06025 PF13508 Acetyltransferase (GNAT) domain JR441_06030 PF03960 ArsC family JR441_06035 PF03741 Integral membrane protein TerC family JR441_06045 PF05389 Negative regulator of genetic competence (MecA) JR441_06055 PF06054 Competence protein CoiA-like family JR441_06060 PF01432 Peptidase family M3 JR441_06060 PF08439 Oligopeptidase F JR441_06075 PF01152 Bacterial-like globin JR441_06080 PF01464 Transglycosylase SLT domain JR441_06085 PF01928 CYTH domain JR441_06095 PF04607 Region found in RelA / SpoT proteins JR441_06100 PF01513 ATP-NAD kinase JR441_06105 PF00849 RNA pseudouridylate synthase JR441_06110 PF00149 Calcineurin-like phosphoesterase JR441_06115 PF02080 TrkA-C domain JR441_06115 PF00999 Sodium/hydrogen exchanger family JR441_06115 PF02254 TrkA-N domain JR441_06120 PF03070 TENA/THI-4/PQQC family JR441_06125 PF02581 Thiamine monophosphate synthase JR441_06130 PF01266 FAD dependent oxidoreductase JR441_06135 PF02597 ThiS family JR441_06140 PF05690 Thiazole biosynthesis protein ThiG JR441_06145 PF00899 ThiF family JR441_06150 PF08543 Phosphomethylpyrimidine kinase JR441_06160 PF14153 Spore coat protein CotO JR441_06165 PF10612 Spore coat protein Z JR441_06170 PF10612 Spore coat protein Z JR441_06175 PF07552 Spore Coat Protein X and V domain JR441_06185 PF07552 Spore Coat Protein X and V domain JR441_06190 PF07098 Protein of unknown function (DUF1360) JR441_06205 PF14069 Stage VI sporulation protein F JR441_06210 PF00580 UvrD/REP helicase N-terminal domain JR441_06210 PF13361 UvrD-like helicase C-terminal domain JR441_06220 PF13673 Acetyltransferase (GNAT) domain JR441_06230 PF00756 Putative esterase JR441_06235 PF01053 Cys/Met metabolism PLP-dependent enzyme JR441_06240 PF01053 Cys/Met metabolism PLP-dependent enzyme JR441_06245 PF13302 Acetyltransferase (GNAT) domain JR441_06250 PF05684 Protein of unknown function (DUF819) JR441_06260 PF00589 Phage integrase family JR441_06260 PF02899 Phage integrase, N-terminal SAM-like domain JR441_06265 PF06114 IrrE N-terminal-like domain JR441_06275 PF01381 Helix-turn-helix JR441_06295 PF01381 Helix-turn-helix JR441_06300 PF17448 Uncharacterized YqaH-like JR441_06305 PF09466 Hypothetical protein Yqai JR441_06320 PF09588 YqaJ-like viral recombinase domain JR441_06325 PF03837 RecT family JR441_06330 PF07261 Replication initiation and membrane attachment JR441_06335 PF01695 IstB-like ATP binding protein JR441_06360 PF17356 Phage-like element PBSX protein XtrA JR441_06410 PF10668 Phage terminase small subunit JR441_06480 PF00041 Fibronectin type III domain JR441_06480 PF00704 Glycosyl hydrolases family 18 JR441_06530 PF05105 Bacteriophage holin family JR441_06535 PF01471 Putative peptidoglycan binding domain JR441_06535 PF01510 N-acetylmuramoyl-L-alanine amidase JR441_06545 PF04740 LXG domain of WXG superfamily JR441_06550 PF02481 DNA recombination-mediator protein A JR441_06555 PF00156 Phosphoribosyl transferase domain JR441_06570 PF03992 Antibiotic biosynthesis monooxygenase JR441_06580 PF02368 Bacterial Ig-like domain (group 2) JR441_06585 PF05043 Mga helix-turn-helix domain JR441_06585 PF00874 PRD domain JR441_06585 PF08279 HTH domain JR441_06585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR441_06590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR441_06590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR441_06590 PF02378 Phosphotransferase system, EIIC JR441_06595 PF01238 Phosphomannose isomerase type I JR441_06600 PF11208 Protein of unknown function (DUF2992) JR441_06605 PF13302 Acetyltransferase (GNAT) domain JR441_06615 PF04073 Aminoacyl-tRNA editing domain JR441_06620 PF13783 Domain of unknown function (DUF4177) JR441_06625 PF14154 Domain of unknown function (DUF4306) JR441_06630 PF01040 UbiA prenyltransferase family JR441_06640 PF11738 Protein of unknown function (DUF3298) JR441_06640 PF13739 Deacetylase PdaC JR441_06640 PF01522 Polysaccharide deacetylase JR441_06645 PF10901 Protein of unknown function (DUF2690) JR441_06650 PF14070 Putative motility protein JR441_06655 PF10026 Predicted Zn-dependent protease (DUF2268) JR441_06660 PF10990 Protein of unknown function (DUF2809) JR441_06665 PF14172 Domain of unknown function (DUF4309) JR441_06670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JR441_06670 PF01568 Molydopterin dinucleotide binding domain JR441_06670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR441_06670 PF12838 4Fe-4S dicluster domain JR441_06670 PF00384 Molybdopterin oxidoreductase JR441_06675 PF07849 Protein of unknown function (DUF1641) JR441_06680 PF11611 Domain of unknown function (DUF4352) JR441_06685 PF00293 NUDIX domain JR441_06695 PF00067 Cytochrome P450 JR441_06700 PF04101 Glycosyltransferase family 28 C-terminal domain JR441_06710 PF02602 Uroporphyrinogen-III synthase HemD JR441_06715 PF03649 Uncharacterised protein family (UPF0014) JR441_06720 PF00005 ABC transporter JR441_06725 PF13536 Putative multidrug resistance efflux transporter JR441_06735 PF07849 Protein of unknown function (DUF1641) JR441_06740 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_06745 PF02614 Glucuronate isomerase JR441_06755 PF02615 Malate/L-lactate dehydrogenase JR441_06760 PF00107 Zinc-binding dehydrogenase JR441_06760 PF08240 Alcohol dehydrogenase GroES-like domain JR441_06765 PF03786 D-mannonate dehydratase (UxuA) JR441_06770 PF00106 short chain dehydrogenase JR441_06775 PF07690 Major Facilitator Superfamily JR441_06780 PF00356 Bacterial regulatory proteins, lacI family JR441_06785 PF01232 Mannitol dehydrogenase Rossmann domain JR441_06785 PF08125 Mannitol dehydrogenase C-terminal domain JR441_06790 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JR441_06790 PF08666 SAF domain JR441_06795 PF01925 Sulfite exporter TauE/SafE JR441_06800 PF05163 DinB family JR441_06805 PF00004 ATPase family associated with various cellular activities (AAA) JR441_06810 PF18801 response regulator aspartate phosphatase H, N terminal JR441_06820 PF03795 YCII-related domain JR441_06825 PF01510 N-acetylmuramoyl-L-alanine amidase JR441_06825 PF01476 LysM domain JR441_06825 PF01471 Putative peptidoglycan binding domain JR441_06830 PF08000 Bacterial PH domain JR441_06835 PF05908 Poly-gamma-glutamate hydrolase JR441_06840 PF05067 Manganese containing catalase JR441_06845 PF06114 IrrE N-terminal-like domain JR441_06850 PF01381 Helix-turn-helix JR441_06865 PF01695 IstB-like ATP binding protein JR441_06880 PF17356 Phage-like element PBSX protein XtrA JR441_06885 PF08281 Sigma-70, region 4 JR441_06890 PF03592 Terminase small subunit JR441_06890 PF10668 Phage terminase small subunit JR441_06895 PF17288 Terminase RNAseH like domain JR441_06895 PF04466 Phage terminase large subunit JR441_06900 PF04860 Phage portal protein JR441_06905 PF14550 Putative phage serine protease XkdF JR441_06910 PF05065 Phage capsid family JR441_06915 PF11436 Protein of unknown function (DUF3199) JR441_06920 PF12206 Domain of unknown function (DUF3599) JR441_06925 PF04883 Bacteriophage HK97-gp10, putative tail-component JR441_06940 PF04984 Phage tail sheath protein subtilisin-like domain JR441_06940 PF17482 Phage tail sheath C-terminal domain JR441_06940 PF17481 Phage tail sheath protein beta-sandwich domain JR441_06945 PF09393 Phage tail tube protein JR441_06950 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC JR441_06960 PF01464 Transglycosylase SLT domain JR441_06960 PF01464 Transglycosylase SLT domain JR441_06965 PF01476 LysM domain JR441_06975 PF10844 Protein of unknown function (DUF2577) JR441_06980 PF10934 Protein of unknown function (DUF2634) JR441_06985 PF04865 Baseplate J-like protein JR441_06990 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JR441_07005 PF09636 XkdW protein JR441_07010 PF09693 Phage uncharacterised protein (Phage_XkdX) JR441_07020 PF10779 Haemolysin XhlA JR441_07025 PF04688 SPP1 phage holin JR441_07030 PF01510 N-acetylmuramoyl-L-alanine amidase JR441_07030 PF01471 Putative peptidoglycan binding domain JR441_07030 PF01476 LysM domain JR441_07035 PF01757 Acyltransferase family JR441_07045 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system JR441_07050 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JR441_07055 PF01384 Phosphate transporter family JR441_07060 PF01865 Protein of unknown function DUF47 JR441_07065 PF13520 Amino acid permease JR441_07070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_07075 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JR441_07080 PF00535 Glycosyl transferase family 2 JR441_07090 PF13180 PDZ domain JR441_07095 PF14748 Pyrroline-5-carboxylate reductase dimerisation JR441_07095 PF03807 NADP oxidoreductase coenzyme F420-dependent JR441_07100 PF04951 D-aminopeptidase JR441_07105 PF00528 Binding-protein-dependent transport system inner membrane component JR441_07110 PF12911 N-terminal TM domain of oligopeptide transport permease C JR441_07110 PF00528 Binding-protein-dependent transport system inner membrane component JR441_07115 PF00005 ABC transporter JR441_07115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR441_07120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JR441_07125 PF17676 LD-carboxypeptidase C-terminal domain JR441_07125 PF02016 LD-carboxypeptidase N-terminal domain JR441_07130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR441_07130 PF13378 Enolase C-terminal domain-like JR441_07135 PF00877 NlpC/P60 family JR441_07140 PF00005 ABC transporter JR441_07140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JR441_07145 PF10282 Lactonase, 7-bladed beta-propeller JR441_07155 PF03061 Thioesterase superfamily JR441_07160 PF00042 Globin JR441_07160 PF00175 Oxidoreductase NAD-binding domain JR441_07160 PF00970 Oxidoreductase FAD-binding domain JR441_07170 PF04239 Protein of unknown function (DUF421) JR441_07175 PF12867 DinB superfamily JR441_07180 PF13302 Acetyltransferase (GNAT) domain JR441_07185 PF00893 Small Multidrug Resistance protein JR441_07190 PF00893 Small Multidrug Resistance protein JR441_07195 PF00551 Formyl transferase JR441_07195 PF01842 ACT domain JR441_07200 PF01472 PUA domain JR441_07200 PF00696 Amino acid kinase family JR441_07205 PF00171 Aldehyde dehydrogenase family JR441_07210 PF02566 OsmC-like protein JR441_07215 PF01047 MarR family JR441_07220 PF02566 OsmC-like protein JR441_07225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR441_07230 PF01717 Cobalamin-independent synthase, Catalytic domain JR441_07230 PF08267 Cobalamin-independent synthase, N-terminal domain JR441_07235 PF00082 Subtilase family JR441_07240 PF01740 STAS domain JR441_07245 PF02361 Cobalt transport protein JR441_07250 PF00005 ABC transporter JR441_07255 PF09819 ABC-type cobalt transport system, permease component JR441_07260 PF07615 YKOF-related Family JR441_07265 PF00072 Response regulator receiver domain JR441_07265 PF00486 Transcriptional regulatory protein, C terminal JR441_07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_07270 PF00512 His Kinase A (phospho-acceptor) domain JR441_07270 PF00672 HAMP domain JR441_07275 PF03413 Peptidase propeptide and YPEB domain JR441_07280 PF03413 Peptidase propeptide and YPEB domain JR441_07285 PF11132 Transcriptional regulator protein (SplA) JR441_07290 PF00571 CBS domain JR441_07290 PF01769 Divalent cation transporter JR441_07290 PF03448 MgtE intracellular N domain JR441_07295 PF13411 MerR HTH family regulatory protein JR441_07310 PF01047 MarR family JR441_07315 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JR441_07325 PF00149 Calcineurin-like phosphoesterase JR441_07335 PF00535 Glycosyl transferase family 2 JR441_07340 PF01068 ATP dependent DNA ligase domain JR441_07345 PF02735 Ku70/Ku80 beta-barrel domain JR441_07355 PF09335 SNARE associated Golgi protein JR441_07360 PF03741 Integral membrane protein TerC family JR441_07365 PF04542 Sigma-70 region 2 JR441_07370 PF12791 Anti-sigma factor N-terminus JR441_07375 PF00269 Small, acid-soluble spore proteins, alpha/beta type JR441_07380 PF08876 Domain of unknown function (DUF1836) JR441_07385 PF01435 Peptidase family M48 JR441_07390 PF02386 Cation transport protein JR441_07405 PF01757 Acyltransferase family JR441_07410 PF00989 PAS fold JR441_07410 PF00512 His Kinase A (phospho-acceptor) domain JR441_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_07410 PF13426 PAS domain JR441_07410 PF13188 PAS domain JR441_07415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JR441_07415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JR441_07425 PF01008 Initiation factor 2 subunit family JR441_07430 PF01636 Phosphotransferase enzyme family JR441_07435 PF00795 Carbon-nitrogen hydrolase JR441_07440 PF00155 Aminotransferase class I and II JR441_07445 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JR441_07445 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JR441_07455 PF00596 Class II Aldolase and Adducin N-terminal domain JR441_07460 PF03079 ARD/ARD' family JR441_07465 PF06803 Protein of unknown function (DUF1232) JR441_07470 PF09388 Spo0E like sporulation regulatory protein JR441_07480 PF00512 His Kinase A (phospho-acceptor) domain JR441_07480 PF02743 Cache domain JR441_07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_07485 PF01047 MarR family JR441_07490 PF13677 Membrane MotB of proton-channel complex MotA/MotB JR441_07490 PF00691 OmpA family JR441_07495 PF01618 MotA/TolQ/ExbB proton channel family JR441_07500 PF00004 ATPase family associated with various cellular activities (AAA) JR441_07500 PF07724 AAA domain (Cdc48 subfamily) JR441_07500 PF10431 C-terminal, D2-small domain, of ClpB protein JR441_07500 PF17871 AAA lid domain JR441_07510 PF06508 Queuosine biosynthesis protein QueC JR441_07515 PF01242 6-pyruvoyl tetrahydropterin synthase JR441_07520 PF04055 Radical SAM superfamily JR441_07525 PF14489 QueF-like protein JR441_07535 PF01638 HxlR-like helix-turn-helix JR441_07545 PF01476 LysM domain JR441_07550 PF01476 LysM domain JR441_07555 PF00704 Glycosyl hydrolases family 18 JR441_07560 PF11514 Protein of unknown function (DUF3219) JR441_07565 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JR441_07575 PF07486 Cell Wall Hydrolase JR441_07580 PF01943 Polysaccharide biosynthesis protein JR441_07585 PF00578 AhpC/TSA family JR441_07600 PF00557 Metallopeptidase family M24 JR441_07600 PF01321 Creatinase/Prolidase N-terminal domain JR441_07605 PF00356 Bacterial regulatory proteins, lacI family JR441_07605 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR441_07610 PF03123 CAT RNA binding domain JR441_07610 PF00874 PRD domain JR441_07615 PF02378 Phosphotransferase system, EIIC JR441_07615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR441_07615 PF00367 phosphotransferase system, EIIB JR441_07620 PF00381 PTS HPr component phosphorylation site JR441_07625 PF02896 PEP-utilising enzyme, TIM barrel domain JR441_07625 PF00391 PEP-utilising enzyme, mobile domain JR441_07625 PF05524 PEP-utilising enzyme, N-terminal JR441_07630 PF11132 Transcriptional regulator protein (SplA) JR441_07640 PF00583 Acetyltransferase (GNAT) family JR441_07645 PF00672 HAMP domain JR441_07645 PF02743 Cache domain JR441_07645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_07650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR441_07650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JR441_07655 PF00188 Cysteine-rich secretory protein family JR441_07660 PF03717 Penicillin-binding Protein dimerisation domain JR441_07660 PF00905 Penicillin binding protein transpeptidase domain JR441_07665 PF00989 PAS fold JR441_07665 PF08447 PAS fold JR441_07665 PF00512 His Kinase A (phospho-acceptor) domain JR441_07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_07670 PF00155 Aminotransferase class I and II JR441_07680 PF01584 CheW-like domain JR441_07680 PF00072 Response regulator receiver domain JR441_07685 PF14177 YkyB-like protein JR441_07690 PF07690 Major Facilitator Superfamily JR441_07695 PF01476 LysM domain JR441_07695 PF03734 L,D-transpeptidase catalytic domain JR441_07700 PF00149 Calcineurin-like phosphoesterase JR441_07700 PF10518 TAT (twin-arginine translocation) pathway signal sequence JR441_07710 PF00563 EAL domain JR441_07710 PF10388 EAL-domain associated signalling protein domain JR441_07715 PF08796 Protein of unknown function (DUF1797) JR441_07720 PF04308 Ribonuclease H-like JR441_07725 PF14156 Antirepressor AbbA JR441_07735 PF03466 LysR substrate binding domain JR441_07735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_07740 PF00258 Flavodoxin JR441_07750 PF00258 Flavodoxin JR441_07755 PF14602 Hexapeptide repeat of succinyl-transferase JR441_07755 PF00132 Bacterial transferase hexapeptide (six repeats) JR441_07755 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JR441_07760 PF01546 Peptidase family M20/M25/M40 JR441_07760 PF07687 Peptidase dimerisation domain JR441_07765 PF03698 Uncharacterised protein family (UPF0180) JR441_07770 PF00924 Mechanosensitive ion channel JR441_07775 PF10417 C-terminal domain of 1-Cys peroxiredoxin JR441_07775 PF00578 AhpC/TSA family JR441_07780 PF00578 AhpC/TSA family JR441_07795 PF12804 MobA-like NTP transferase domain JR441_07800 PF00899 ThiF family JR441_07805 PF00994 Probable molybdopterin binding domain JR441_07805 PF03453 MoeA N-terminal region (domain I and II) JR441_07805 PF03454 MoeA C-terminal region (domain IV) JR441_07810 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JR441_07815 PF02391 MoaE protein JR441_07820 PF02597 ThiS family JR441_07825 PF00005 ABC transporter JR441_07825 PF00664 ABC transporter transmembrane region JR441_07830 PF00664 ABC transporter transmembrane region JR441_07830 PF00005 ABC transporter JR441_07835 PF04893 Yip1 domain JR441_07840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR441_07845 PF00005 ABC transporter JR441_07850 PF12704 MacB-like periplasmic core domain JR441_07850 PF02687 FtsX-like permease family JR441_07855 PF08220 DeoR-like helix-turn-helix domain JR441_07855 PF00455 DeoR C terminal sensor domain JR441_07860 PF00294 pfkB family carbohydrate kinase JR441_07865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR441_07865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR441_07870 PF10502 Signal peptidase, peptidase S26 JR441_07880 PF00005 ABC transporter JR441_07880 PF12848 ABC transporter JR441_07885 PF02558 Ketopantoate reductase PanE/ApbA JR441_07885 PF08546 Ketopantoate reductase PanE/ApbA C terminal JR441_07890 PF02073 Thermophilic metalloprotease (M29) JR441_07895 PF17447 Uncharacterized YkpC-like JR441_07905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JR441_07905 PF18277 AbrB C-terminal domain JR441_07910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_07910 PF00512 His Kinase A (phospho-acceptor) domain JR441_07910 PF00989 PAS fold JR441_07915 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JR441_07920 PF02254 TrkA-N domain JR441_07920 PF02080 TrkA-C domain JR441_07925 PF13382 Adenine deaminase C-terminal domain JR441_07925 PF01979 Amidohydrolase family JR441_07930 PF00753 Metallo-beta-lactamase superfamily JR441_07930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JR441_07930 PF17770 Ribonuclease J C-terminal domain JR441_07935 PF07288 Protein of unknown function (DUF1447) JR441_07945 PF01327 Polypeptide deformylase JR441_07955 PF10368 Putative cell-wall binding lipoprotein JR441_07960 PF00676 Dehydrogenase E1 component JR441_07965 PF02779 Transketolase, pyrimidine binding domain JR441_07965 PF02780 Transketolase, C-terminal domain JR441_07970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR441_07970 PF00364 Biotin-requiring enzyme JR441_07970 PF02817 e3 binding domain JR441_07975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR441_07975 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_07985 PF13790 SR1 protein JR441_07990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JR441_07990 PF01276 Orn/Lys/Arg decarboxylase, major domain JR441_07995 PF05256 Uncharacterised protein family (UPF0223) JR441_08000 PF06335 Protein of unknown function (DUF1054) JR441_08010 PF00459 Inositol monophosphatase family JR441_08015 PF00583 Acetyltransferase (GNAT) family JR441_08020 PF04072 Leucine carboxyl methyltransferase JR441_08025 PF03413 Peptidase propeptide and YPEB domain JR441_08025 PF01447 Thermolysin metallopeptidase, catalytic domain JR441_08025 PF02868 Thermolysin metallopeptidase, alpha-helical domain JR441_08025 PF07504 Fungalysin/Thermolysin Propeptide Motif JR441_08040 PF08281 Sigma-70, region 4 JR441_08040 PF04542 Sigma-70 region 2 JR441_08045 PF13490 Putative zinc-finger JR441_08055 PF17259 Family of unknown function (DUF5325) JR441_08060 PF03144 Elongation factor Tu domain 2 JR441_08060 PF14492 Elongation Factor G, domain II JR441_08060 PF00679 Elongation factor G C-terminus JR441_08060 PF00009 Elongation factor Tu GTP binding domain JR441_08065 PF14036 YlaH-like protein JR441_08070 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JR441_08075 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JR441_08080 PF02562 PhoH-like protein JR441_08080 PF13638 PIN domain JR441_08090 PF04960 Glutaminase JR441_08095 PF07408 Protein of unknown function (DUF1507) JR441_08100 PF01098 Cell cycle protein JR441_08105 PF00289 Biotin carboxylase, N-terminal domain JR441_08105 PF00364 Biotin-requiring enzyme JR441_08105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR441_08105 PF02785 Biotin carboxylase C-terminal domain JR441_08105 PF00682 HMGL-like JR441_08105 PF02436 Conserved carboxylase domain JR441_08110 PF02628 Cytochrome oxidase assembly protein JR441_08115 PF01040 UbiA prenyltransferase family JR441_08120 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JR441_08120 PF00034 Cytochrome c JR441_08120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JR441_08125 PF00115 Cytochrome C and Quinol oxidase polypeptide I JR441_08130 PF00510 Cytochrome c oxidase subunit III JR441_08135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JR441_08140 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JR441_08145 PF08868 YugN-like family JR441_08150 PF00571 CBS domain JR441_08155 PF00188 Cysteine-rich secretory protein family JR441_08155 PF14504 CAP-associated N-terminal JR441_08160 PF14071 Putative coat protein JR441_08165 PF14003 YlbE-like protein JR441_08170 PF06133 Control of competence regulator ComK, YlbF/YmcA JR441_08175 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JR441_08185 PF01467 Cytidylyltransferase-like JR441_08190 PF07670 Nucleoside recognition JR441_08195 PF01734 Patatin-like phospholipase JR441_08200 PF05362 Lon protease (S16) C-terminal proteolytic domain JR441_08200 PF13180 PDZ domain JR441_08205 PF05636 HIGH Nucleotidyl Transferase JR441_08215 PF02620 Large ribosomal RNA subunit accumulation protein YceD JR441_08220 PF01783 Ribosomal L32p protein family JR441_08230 PF00583 Acetyltransferase (GNAT) family JR441_08235 PF08546 Ketopantoate reductase PanE/ApbA C terminal JR441_08235 PF02558 Ketopantoate reductase PanE/ApbA JR441_08240 PF10079 Bacillithiol biosynthesis BshC JR441_08245 PF02381 MraZ protein, putative antitoxin-like JR441_08250 PF01795 MraW methylase family JR441_08260 PF03717 Penicillin-binding Protein dimerisation domain JR441_08260 PF03793 PASTA domain JR441_08260 PF00905 Penicillin binding protein transpeptidase domain JR441_08265 PF03793 PASTA domain JR441_08265 PF00905 Penicillin binding protein transpeptidase domain JR441_08265 PF03717 Penicillin-binding Protein dimerisation domain JR441_08270 PF01225 Mur ligase family, catalytic domain JR441_08270 PF02875 Mur ligase family, glutamate ligase domain JR441_08270 PF08245 Mur ligase middle domain JR441_08275 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JR441_08275 PF00953 Glycosyl transferase family 4 JR441_08280 PF02875 Mur ligase family, glutamate ligase domain JR441_08280 PF08245 Mur ligase middle domain JR441_08285 PF01098 Cell cycle protein JR441_08290 PF04101 Glycosyltransferase family 28 C-terminal domain JR441_08290 PF03033 Glycosyltransferase family 28 N-terminal domain JR441_08295 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JR441_08295 PF01565 FAD binding domain JR441_08300 PF08478 POTRA domain, FtsQ-type JR441_08305 PF05949 Bacterial protein of unknown function (DUF881) JR441_08310 PF05949 Bacterial protein of unknown function (DUF881) JR441_08315 PF06947 Protein of unknown function (DUF1290) JR441_08320 PF02491 SHS2 domain inserted in FTSA JR441_08325 PF00091 Tubulin/FtsZ family, GTPase domain JR441_08325 PF12327 FtsZ family, C-terminal domain JR441_08330 PF05922 Peptidase inhibitor I9 JR441_08330 PF00082 Subtilase family JR441_08335 PF03419 Sporulation factor SpoIIGA JR441_08340 PF04545 Sigma-70, region 4 JR441_08340 PF04542 Sigma-70 region 2 JR441_08345 PF04545 Sigma-70, region 4 JR441_08345 PF04539 Sigma-70 region 3 JR441_08345 PF04542 Sigma-70 region 2 JR441_08350 PF00005 ABC transporter JR441_08355 PF01546 Peptidase family M20/M25/M40 JR441_08355 PF07687 Peptidase dimerisation domain JR441_08360 PF05239 PRC-barrel domain JR441_08365 PF02578 Multi-copper polyphenol oxidoreductase laccase JR441_08370 PF01168 Alanine racemase, N-terminal domain JR441_08375 PF04472 Cell division protein SepF JR441_08380 PF02325 YGGT family JR441_08385 PF01479 S4 domain JR441_08385 PF17774 Putative RNA-binding domain in YlmH JR441_08390 PF05103 DivIVA protein JR441_08395 PF08264 Anticodon-binding domain of tRNA JR441_08395 PF00133 tRNA synthetases class I (I, L, M and V) JR441_08400 PF01258 Prokaryotic dksA/traR C4-type zinc finger JR441_08405 PF01252 Signal peptidase (SPase) II JR441_08410 PF00849 RNA pseudouridylate synthase JR441_08410 PF01479 S4 domain JR441_08415 PF00156 Phosphoribosyl transferase domain JR441_08420 PF00860 Permease family JR441_08425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JR441_08425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JR441_08430 PF01979 Amidohydrolase family JR441_08435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JR441_08435 PF00117 Glutamine amidotransferase class-I JR441_08440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR441_08440 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JR441_08440 PF02142 MGS-like domain JR441_08445 PF00175 Oxidoreductase NAD-binding domain JR441_08445 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JR441_08450 PF01180 Dihydroorotate dehydrogenase JR441_08455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JR441_08460 PF00156 Phosphoribosyl transferase domain JR441_08465 PF01507 Phosphoadenosine phosphosulfate reductase family JR441_08470 PF01384 Phosphate transporter family JR441_08475 PF14306 PUA-like domain JR441_08475 PF01747 ATP-sulfurylase JR441_08485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JR441_08490 PF01903 CbiX JR441_08500 PF05670 NFACT protein RNA binding domain JR441_08505 PF00690 Cation transporter/ATPase, N-terminus JR441_08505 PF00689 Cation transporting ATPase, C-terminus JR441_08510 PF03755 YicC-like family, N-terminal region JR441_08510 PF08340 Domain of unknown function (DUF1732) JR441_08515 PF04025 Domain of unknown function (DUF370) JR441_08520 PF00625 Guanylate kinase JR441_08525 PF01192 RNA polymerase Rpb6 JR441_08530 PF02441 Flavoprotein JR441_08530 PF04127 DNA / pantothenate metabolism flavoprotein JR441_08535 PF00271 Helicase conserved C-terminal domain JR441_08535 PF17764 3′ DNA-binding domain (3′BD) JR441_08535 PF18074 Primosomal protein N C-terminal domain JR441_08535 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JR441_08535 PF04851 Type III restriction enzyme, res subunit JR441_08540 PF01327 Polypeptide deformylase JR441_08545 PF00551 Formyl transferase JR441_08545 PF02911 Formyl transferase, C-terminal domain JR441_08550 PF01189 16S rRNA methyltransferase RsmB/F JR441_08550 PF01029 NusB family JR441_08555 PF04055 Radical SAM superfamily JR441_08565 PF03793 PASTA domain JR441_08565 PF00069 Protein kinase domain JR441_08570 PF03193 RsgA GTPase JR441_08570 PF16745 RsgA N-terminal domain JR441_08575 PF00834 Ribulose-phosphate 3 epimerase family JR441_08580 PF04263 Thiamin pyrophosphokinase, catalytic domain JR441_08580 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JR441_08585 PF08183 Stage V sporulation protein family JR441_08590 PF00830 Ribosomal L28 family JR441_08595 PF03780 Asp23 family, cell envelope-related function JR441_08600 PF02734 DAK2 domain JR441_08600 PF13684 Dihydroxyacetone kinase family JR441_08605 PF01842 ACT domain JR441_08605 PF03315 Serine dehydratase beta chain JR441_08610 PF03313 Serine dehydratase alpha chain JR441_08615 PF17191 RecG wedge domain JR441_08615 PF00271 Helicase conserved C-terminal domain JR441_08615 PF00270 DEAD/DEAH box helicase JR441_08620 PF03061 Thioesterase superfamily JR441_08625 PF02504 Fatty acid synthesis protein JR441_08630 PF00698 Acyl transferase domain JR441_08640 PF00550 Phosphopantetheine attachment site JR441_08645 PF14622 Ribonuclease-III-like JR441_08645 PF00035 Double-stranded RNA binding motif JR441_08650 PF06470 SMC proteins Flexible Hinge Domain JR441_08650 PF02463 RecF/RecN/SMC N terminal domain JR441_08655 PF00448 SRP54-type protein, GTPase domain JR441_08655 PF02881 SRP54-type protein, helical bundle domain JR441_08660 PF02369 Bacterial Ig-like domain (group 1) JR441_08665 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JR441_08670 PF02978 Signal peptide binding domain JR441_08670 PF00448 SRP54-type protein, GTPase domain JR441_08670 PF02881 SRP54-type protein, helical bundle domain JR441_08675 PF00886 Ribosomal protein S16 JR441_08685 PF11068 YlqD protein JR441_08690 PF01782 RimM N-terminal domain JR441_08690 PF05239 PRC-barrel domain JR441_08695 PF01746 tRNA (Guanine-1)-methyltransferase JR441_08700 PF01245 Ribosomal protein L19 JR441_08705 PF01926 50S ribosome-binding GTPase JR441_08710 PF01351 Ribonuclease HII JR441_08720 PF01312 FlhB HrpN YscU SpaS Family JR441_08725 PF00549 CoA-ligase JR441_08725 PF08442 ATP-grasp domain JR441_08730 PF02629 CoA binding domain JR441_08730 PF00549 CoA-ligase JR441_08735 PF02481 DNA recombination-mediator protein A JR441_08740 PF01131 DNA topoisomerase JR441_08740 PF01396 Topoisomerase DNA binding C4 zinc finger JR441_08740 PF01751 Toprim domain JR441_08745 PF01134 Glucose inhibited division protein A JR441_08750 PF00589 Phage integrase family JR441_08750 PF02899 Phage integrase, N-terminal SAM-like domain JR441_08755 PF00227 Proteasome subunit JR441_08760 PF10431 C-terminal, D2-small domain, of ClpB protein JR441_08760 PF00004 ATPase family associated with various cellular activities (AAA) JR441_08760 PF07724 AAA domain (Cdc48 subfamily) JR441_08765 PF08222 CodY helix-turn-helix domain JR441_08765 PF06018 CodY GAF-like domain JR441_08770 PF00460 Flagella basal body rod protein JR441_08775 PF00460 Flagella basal body rod protein JR441_08775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR441_08780 PF02049 Flagellar hook-basal body complex protein FliE JR441_08785 PF08345 Flagellar M-ring protein C-terminal JR441_08785 PF01514 Secretory protein of YscJ/FliF family JR441_08790 PF14842 FliG N-terminal domain JR441_08790 PF14841 FliG middle domain JR441_08790 PF01706 FliG C-terminal domain JR441_08795 PF02108 Flagellar assembly protein FliH JR441_08800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR441_08800 PF02874 ATP synthase alpha/beta family, beta-barrel domain JR441_08800 PF18269 T3SS EscN ATPase C-terminal domain JR441_08805 PF02050 Flagellar FliJ protein JR441_08810 PF03448 MgtE intracellular N domain JR441_08815 PF02120 Flagellar hook-length control protein FliK JR441_08820 PF03963 Flagellar hook capping protein - N-terminal region JR441_08825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR441_08825 PF00460 Flagella basal body rod protein JR441_08830 PF06289 Flagellar and Swarming motility proteins JR441_08835 PF03748 Flagellar basal body-associated protein FliL JR441_08840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JR441_08840 PF02154 Flagellar motor switch protein FliM JR441_08845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JR441_08845 PF04509 CheC-like family JR441_08850 PF00072 Response regulator receiver domain JR441_08855 PF04347 Flagellar biosynthesis protein, FliO JR441_08860 PF00813 FliP family JR441_08865 PF01313 Bacterial export proteins, family 3 JR441_08870 PF01311 Bacterial export proteins, family 1 JR441_08875 PF01312 FlhB HrpN YscU SpaS Family JR441_08880 PF00771 FHIPEP family JR441_08885 PF00448 SRP54-type protein, GTPase domain JR441_08890 PF10609 NUBPL iron-transfer P-loop NTPase JR441_08895 PF00072 Response regulator receiver domain JR441_08895 PF01339 CheB methylesterase JR441_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_08900 PF02895 Signal transducing histidine kinase, homodimeric domain JR441_08900 PF01584 CheW-like domain JR441_08900 PF01627 Hpt domain JR441_08900 PF07194 P2 response regulator binding domain JR441_08905 PF01584 CheW-like domain JR441_08910 PF04509 CheC-like family JR441_08915 PF03975 CheD chemotactic sensory transduction JR441_08920 PF04545 Sigma-70, region 4 JR441_08920 PF04539 Sigma-70 region 3 JR441_08920 PF04542 Sigma-70 region 2 JR441_08930 PF00318 Ribosomal protein S2 JR441_08935 PF00889 Elongation factor TS JR441_08940 PF00696 Amino acid kinase family JR441_08945 PF01765 Ribosome recycling factor JR441_08950 PF01255 Putative undecaprenyl diphosphate synthase JR441_08960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JR441_08960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JR441_08960 PF13288 DXP reductoisomerase C-terminal domain JR441_08965 PF17820 PDZ domain JR441_08965 PF02163 Peptidase family M50 JR441_08970 PF04073 Aminoacyl-tRNA editing domain JR441_08970 PF03129 Anticodon binding domain JR441_08970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR441_08975 PF11490 DNA polymerase III polC-type N-terminus II JR441_08975 PF14579 Helix-hairpin-helix motif JR441_08975 PF07733 Bacterial DNA polymerase III alpha NTPase domain JR441_08975 PF02811 PHP domain JR441_08975 PF00929 Exonuclease JR441_08975 PF14480 DNA polymerase III polC-type N-terminus I JR441_08975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JR441_08980 PF17384 RimP C-terminal SH3 domain JR441_08980 PF02576 RimP N-terminal domain JR441_08985 PF13184 NusA-like KH domain JR441_08985 PF08529 NusA N-terminal domain JR441_08985 PF00575 S1 RNA binding domain JR441_08990 PF04296 Protein of unknown function (DUF448) JR441_08995 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JR441_09000 PF11987 Translation-initiation factor 2 JR441_09000 PF00009 Elongation factor Tu GTP binding domain JR441_09000 PF04760 Translation initiation factor IF-2, N-terminal region JR441_09005 PF04456 Protein of unknown function (DUF503) JR441_09010 PF02033 Ribosome-binding factor A JR441_09015 PF16198 tRNA pseudouridylate synthase B C-terminal domain JR441_09015 PF01509 TruB family pseudouridylate synthase (N terminal domain) JR441_09020 PF06574 FAD synthetase JR441_09020 PF01687 Riboflavin kinase JR441_09025 PF00312 Ribosomal protein S15 JR441_09030 PF03725 3' exoribonuclease family, domain 2 JR441_09030 PF01138 3' exoribonuclease family, domain 1 JR441_09030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JR441_09030 PF00575 S1 RNA binding domain JR441_09030 PF00013 KH domain JR441_09035 PF01522 Polysaccharide deacetylase JR441_09040 PF05193 Peptidase M16 inactive domain JR441_09040 PF00675 Insulinase (Peptidase family M16) JR441_09045 PF05239 PRC-barrel domain JR441_09050 PF16924 Dipicolinate synthase subunit A N-terminal domain JR441_09050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JR441_09055 PF02441 Flavoprotein JR441_09060 PF01118 Semialdehyde dehydrogenase, NAD binding domain JR441_09060 PF02774 Semialdehyde dehydrogenase, dimerisation domain JR441_09065 PF00696 Amino acid kinase family JR441_09065 PF13840 ACT domain JR441_09070 PF00701 Dihydrodipicolinate synthetase family JR441_09075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JR441_09075 PF17770 Ribonuclease J C-terminal domain JR441_09075 PF00753 Metallo-beta-lactamase superfamily JR441_09080 PF00574 Clp protease JR441_09085 PF14035 YlzJ-like protein JR441_09090 PF01580 FtsK/SpoIIIE family JR441_09090 PF09397 Ftsk gamma domain JR441_09090 PF17854 FtsK alpha domain JR441_09095 PF00392 Bacterial regulatory proteins, gntR family JR441_09095 PF07702 UTRA domain JR441_09100 PF07690 Major Facilitator Superfamily JR441_09105 PF05193 Peptidase M16 inactive domain JR441_09110 PF05193 Peptidase M16 inactive domain JR441_09110 PF00675 Insulinase (Peptidase family M16) JR441_09120 PF11588 Protein of unknown function (DUF3243) JR441_09125 PF11868 Protein of unknown function (DUF3388) JR441_09130 PF13464 Domain of unknown function (DUF4115) JR441_09135 PF01066 CDP-alcohol phosphatidyltransferase JR441_09140 PF18146 Damage-inducible protein CinA KH domain JR441_09140 PF02464 Competence-damaged protein JR441_09140 PF00994 Probable molybdopterin binding domain JR441_09145 PF00154 recA bacterial DNA recombination protein JR441_09150 PF00144 Beta-lactamase JR441_09155 PF12072 Domain of unknown function (DUF3552) JR441_09155 PF00013 KH domain JR441_09155 PF01966 HD domain JR441_09160 PF13277 YmdB-like protein JR441_09165 PF04232 Stage V sporulation protein S (SpoVS) JR441_09170 PF08240 Alcohol dehydrogenase GroES-like domain JR441_09170 PF00107 Zinc-binding dehydrogenase JR441_09175 PF00155 Aminotransferase class I and II JR441_09180 PF01938 TRAM domain JR441_09180 PF04055 Radical SAM superfamily JR441_09180 PF00919 Uncharacterized protein family UPF0004 JR441_09185 PF06133 Control of competence regulator ComK, YlbF/YmcA JR441_09190 PF10628 Outer spore coat protein E (CotE) JR441_09195 PF01624 MutS domain I JR441_09195 PF05188 MutS domain II JR441_09195 PF05192 MutS domain III JR441_09195 PF05190 MutS family domain IV JR441_09195 PF00488 MutS domain V JR441_09200 PF08676 MutL C terminal dimerisation domain JR441_09200 PF01119 DNA mismatch repair protein, C-terminal domain JR441_09205 PF14184 Regulatory protein YrvL JR441_09215 PF13977 BetI-type transcriptional repressor, C-terminal JR441_09215 PF00440 Bacterial regulatory proteins, tetR family JR441_09220 PF00753 Metallo-beta-lactamase superfamily JR441_09230 PF00698 Acyl transferase domain JR441_09235 PF00698 Acyl transferase domain JR441_09240 PF03060 Nitronate monooxygenase JR441_09240 PF00698 Acyl transferase domain JR441_09245 PF00550 Phosphopantetheine attachment site JR441_09250 PF00109 Beta-ketoacyl synthase, N-terminal domain JR441_09250 PF02801 Beta-ketoacyl synthase, C-terminal domain JR441_09255 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JR441_09255 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JR441_09260 PF00378 Enoyl-CoA hydratase/isomerase JR441_09265 PF00378 Enoyl-CoA hydratase/isomerase JR441_09270 PF02801 Beta-ketoacyl synthase, C-terminal domain JR441_09270 PF14765 Polyketide synthase dehydratase JR441_09270 PF00550 Phosphopantetheine attachment site JR441_09270 PF08659 KR domain JR441_09270 PF00109 Beta-ketoacyl synthase, N-terminal domain JR441_09270 PF13193 AMP-binding enzyme C-terminal domain JR441_09270 PF16197 Ketoacyl-synthetase C-terminal extension JR441_09270 PF00668 Condensation domain JR441_09270 PF00501 AMP-binding enzyme JR441_09275 PF14765 Polyketide synthase dehydratase JR441_09275 PF00109 Beta-ketoacyl synthase, N-terminal domain JR441_09275 PF02801 Beta-ketoacyl synthase, C-terminal domain JR441_09275 PF08659 KR domain JR441_09275 PF16197 Ketoacyl-synthetase C-terminal extension JR441_09275 PF00550 Phosphopantetheine attachment site JR441_09280 PF00109 Beta-ketoacyl synthase, N-terminal domain JR441_09280 PF14765 Polyketide synthase dehydratase JR441_09280 PF08659 KR domain JR441_09280 PF00550 Phosphopantetheine attachment site JR441_09280 PF08242 Methyltransferase domain JR441_09280 PF02801 Beta-ketoacyl synthase, C-terminal domain JR441_09280 PF16197 Ketoacyl-synthetase C-terminal extension JR441_09285 PF13193 AMP-binding enzyme C-terminal domain JR441_09285 PF00550 Phosphopantetheine attachment site JR441_09285 PF02801 Beta-ketoacyl synthase, C-terminal domain JR441_09285 PF00109 Beta-ketoacyl synthase, N-terminal domain JR441_09285 PF16197 Ketoacyl-synthetase C-terminal extension JR441_09285 PF08659 KR domain JR441_09285 PF00501 AMP-binding enzyme JR441_09285 PF14765 Polyketide synthase dehydratase JR441_09285 PF00668 Condensation domain JR441_09290 PF00975 Thioesterase domain JR441_09290 PF00109 Beta-ketoacyl synthase, N-terminal domain JR441_09290 PF14765 Polyketide synthase dehydratase JR441_09290 PF00550 Phosphopantetheine attachment site JR441_09290 PF16197 Ketoacyl-synthetase C-terminal extension JR441_09290 PF02801 Beta-ketoacyl synthase, C-terminal domain JR441_09290 PF08242 Methyltransferase domain JR441_09295 PF00067 Cytochrome P450 JR441_09310 PF00082 Subtilase family JR441_09320 PF05908 Poly-gamma-glutamate hydrolase JR441_09325 PF02566 OsmC-like protein JR441_09330 PF00893 Small Multidrug Resistance protein JR441_09335 PF00893 Small Multidrug Resistance protein JR441_09345 PF12788 YmaF family JR441_09355 PF17209 Hfq protein JR441_09360 PF14157 YmzC-like protein JR441_09370 PF07972 NrdI Flavodoxin like JR441_09375 PF02867 Ribonucleotide reductase, barrel domain JR441_09375 PF08343 Ribonucleotide reductase N-terminal JR441_09375 PF00317 Ribonucleotide reductase, all-alpha domain JR441_09380 PF00268 Ribonucleotide reductase, small chain JR441_09390 PF01520 N-acetylmuramoyl-L-alanine amidase JR441_09390 PF05036 Sporulation related domain JR441_09395 PF17866 AAA lid domain JR441_09395 PF00004 ATPase family associated with various cellular activities (AAA) JR441_09400 PF01926 50S ribosome-binding GTPase JR441_09400 PF13167 GTP-binding GTPase N-terminal JR441_09400 PF16360 GTP-binding GTPase Middle Region JR441_09405 PF06838 Methionine gamma-lyase JR441_09410 PF13411 MerR HTH family regulatory protein JR441_09415 PF00120 Glutamine synthetase, catalytic domain JR441_09415 PF03951 Glutamine synthetase, beta-Grasp domain JR441_09430 PF15652 HNH/Endo VII superfamily toxin with a SHH signature JR441_09430 PF04740 LXG domain of WXG superfamily JR441_09435 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JR441_09435 PF04740 LXG domain of WXG superfamily JR441_09455 PF00535 Glycosyl transferase family 2 JR441_09460 PF00535 Glycosyl transferase family 2 JR441_09460 PF00534 Glycosyl transferases group 1 JR441_09465 PF13302 Acetyltransferase (GNAT) domain JR441_09480 PF13443 Cro/C1-type HTH DNA-binding domain JR441_09485 PF13021 Domain of unknown function (DUF3885) JR441_09515 PF04616 Glycosyl hydrolases family 43 JR441_09515 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JR441_09520 PF00480 ROK family JR441_09525 PF01261 Xylose isomerase-like TIM barrel JR441_09530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR441_09530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR441_09540 PF00565 Staphylococcal nuclease homologue JR441_09545 PF00083 Sugar (and other) transporter JR441_09550 PF01168 Alanine racemase, N-terminal domain JR441_09550 PF00842 Alanine racemase, C-terminal domain JR441_09555 PF10903 Protein of unknown function (DUF2691) JR441_09560 PF00692 dUTPase JR441_09575 PF00303 Thymidylate synthase JR441_09590 PF15493 Domain of unknown function, YrpD JR441_09595 PF14037 YoqO-like protein JR441_09605 PF02416 mttA/Hcf106 family JR441_09615 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JR441_09630 PF03323 Bacillus/Clostridium GerA spore germination protein JR441_09635 PF03845 Spore germination protein JR441_09640 PF05504 Spore germination B3/ GerAC like, C-terminal JR441_09650 PF13761 Domain of unknown function (DUF4166) JR441_09655 PF14158 YndJ-like protein JR441_09665 PF05908 Poly-gamma-glutamate hydrolase JR441_09670 PF10710 Protein of unknown function (DUF2512) JR441_09675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_09680 PF00717 Peptidase S24-like JR441_09680 PF01726 LexA DNA binding domain JR441_09685 PF01476 LysM domain JR441_09690 PF00239 Resolvase, N terminal domain JR441_09695 PF05979 Bacterial protein of unknown function (DUF896) JR441_09700 PF02779 Transketolase, pyrimidine binding domain JR441_09700 PF00456 Transketolase, thiamine diphosphate binding domain JR441_09700 PF02780 Transketolase, C-terminal domain JR441_09705 PF10747 Sporulation inhibitor of replication protein SirA JR441_09710 PF03672 Uncharacterised protein family (UPF0154) JR441_09715 PF09388 Spo0E like sporulation regulatory protein JR441_09720 PF02683 Cytochrome C biogenesis protein transmembrane region JR441_09725 PF00072 Response regulator receiver domain JR441_09730 PF07301 Protein of unknown function (DUF1453) JR441_09735 PF11084 Protein of unknown function (DUF2621) JR441_09745 PF08179 Small acid-soluble spore protein P family JR441_09755 PF00330 Aconitase family (aconitate hydratase) JR441_09755 PF00694 Aconitase C-terminal domain JR441_09760 PF00578 AhpC/TSA family JR441_09765 PF13040 Fur-regulated basic protein B JR441_09770 PF08177 Small acid-soluble spore protein N family JR441_09780 PF03061 Thioesterase superfamily JR441_09790 PF01521 Iron-sulphur cluster biosynthesis JR441_09795 PF02660 Glycerol-3-phosphate acyltransferase JR441_09800 PF13380 CoA binding domain JR441_09805 PF00204 DNA gyrase B JR441_09805 PF01751 Toprim domain JR441_09805 PF00986 DNA gyrase B subunit, carboxyl terminus JR441_09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_09810 PF00521 DNA gyrase/topoisomerase IV, subunit A JR441_09810 PF03989 DNA gyrase C-terminal domain, beta-propeller JR441_09820 PF01235 Sodium:alanine symporter family JR441_09825 PF00942 Cellulose binding domain JR441_09825 PF00150 Cellulase (glycosyl hydrolase family 5) JR441_09830 PF17452 Uncharacterized YnfE-like JR441_09835 PF17189 Glycosyl hydrolase family 30 beta sandwich domain JR441_09840 PF03422 Carbohydrate binding module (family 6) JR441_09840 PF04616 Glycosyl hydrolases family 43 JR441_09845 PF04138 GtrA-like protein JR441_09850 PF00483 Nucleotidyl transferase JR441_09855 PF09335 SNARE associated Golgi protein JR441_09865 PF01039 Carboxyl transferase domain JR441_09870 PF00378 Enoyl-CoA hydratase/isomerase JR441_09875 PF00682 HMGL-like JR441_09880 PF00364 Biotin-requiring enzyme JR441_09885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR441_09885 PF02785 Biotin carboxylase C-terminal domain JR441_09885 PF00289 Biotin carboxylase, N-terminal domain JR441_09890 PF13193 AMP-binding enzyme C-terminal domain JR441_09890 PF00501 AMP-binding enzyme JR441_09895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR441_09895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR441_09895 PF02770 Acyl-CoA dehydrogenase, middle domain JR441_09910 PF02638 Glycosyl hydrolase-like 10 JR441_09915 PF07098 Protein of unknown function (DUF1360) JR441_09920 PF00975 Thioesterase domain JR441_09920 PF13193 AMP-binding enzyme C-terminal domain JR441_09920 PF00668 Condensation domain JR441_09920 PF00550 Phosphopantetheine attachment site JR441_09920 PF00501 AMP-binding enzyme JR441_09925 PF00501 AMP-binding enzyme JR441_09925 PF00668 Condensation domain JR441_09925 PF13193 AMP-binding enzyme C-terminal domain JR441_09925 PF00550 Phosphopantetheine attachment site JR441_09930 PF00501 AMP-binding enzyme JR441_09930 PF00668 Condensation domain JR441_09930 PF00550 Phosphopantetheine attachment site JR441_09930 PF13193 AMP-binding enzyme C-terminal domain JR441_09935 PF00501 AMP-binding enzyme JR441_09935 PF00668 Condensation domain JR441_09935 PF13193 AMP-binding enzyme C-terminal domain JR441_09935 PF00550 Phosphopantetheine attachment site JR441_09940 PF00501 AMP-binding enzyme JR441_09940 PF13193 AMP-binding enzyme C-terminal domain JR441_09940 PF00668 Condensation domain JR441_09940 PF00550 Phosphopantetheine attachment site JR441_09945 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JR441_09950 PF01263 Aldose 1-epimerase JR441_09955 PF01554 MatE JR441_09960 PF16800 IseA DL-endopeptidase inhibitor JR441_09970 PF00589 Phage integrase family JR441_09975 PF12728 Helix-turn-helix domain JR441_09985 PF03466 LysR substrate binding domain JR441_09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_09990 PF00107 Zinc-binding dehydrogenase JR441_09990 PF08240 Alcohol dehydrogenase GroES-like domain JR441_09995 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_09995 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JR441_10000 PF01645 Conserved region in glutamate synthase JR441_10000 PF01493 GXGXG motif JR441_10000 PF04898 Glutamate synthase central domain JR441_10000 PF00310 Glutamine amidotransferases class-II JR441_10005 PF03466 LysR substrate binding domain JR441_10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_10010 PF00696 Amino acid kinase family JR441_10010 PF01472 PUA domain JR441_10015 PF03807 NADP oxidoreductase coenzyme F420-dependent JR441_10015 PF14748 Pyrroline-5-carboxylate reductase dimerisation JR441_10020 PF02334 Replication terminator protein JR441_10025 PF00106 short chain dehydrogenase JR441_10030 PF06103 Bacterial protein of unknown function (DUF948) JR441_10040 PF13302 Acetyltransferase (GNAT) domain JR441_10045 PF07690 Major Facilitator Superfamily JR441_10050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR441_10050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR441_10055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR441_10055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR441_10060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR441_10060 PF01568 Molydopterin dinucleotide binding domain JR441_10060 PF00384 Molybdopterin oxidoreductase JR441_10070 PF17094 Uncharacterised protein family (UPF0715) JR441_10085 PF13217 Protein of unknown function (DUF4025) JR441_10090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_10090 PF00672 HAMP domain JR441_10090 PF05227 CHASE3 domain JR441_10095 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JR441_10095 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JR441_10100 PF03330 Lytic transglycolase JR441_10105 PF06912 Protein of unknown function (DUF1275) JR441_10110 PF00544 Pectate lyase JR441_10115 PF02586 SOS response associated peptidase (SRAP) JR441_10125 PF00190 Cupin JR441_10130 PF16302 Domain of unknown function (DUF4944) JR441_10140 PF00583 Acetyltransferase (GNAT) family JR441_10140 PF14268 YoaP-like JR441_10160 PF04294 VanW like protein JR441_10165 PF11188 Protein of unknown function (DUF2975) JR441_10170 PF13443 Cro/C1-type HTH DNA-binding domain JR441_10175 PF05675 Protein of unknown function (DUF817) JR441_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_10180 PF03466 LysR substrate binding domain JR441_10185 PF00892 EamA-like transporter family JR441_10195 PF01965 DJ-1/PfpI family JR441_10210 PF11518 Protein of unknown function (DUF3221) JR441_10220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JR441_10220 PF00391 PEP-utilising enzyme, mobile domain JR441_10225 PF00457 Glycosyl hydrolases family 11 JR441_10255 PF08863 YolD-like protein JR441_10265 PF02156 Glycosyl hydrolase family 26 JR441_10265 PF03425 Carbohydrate binding domain (family 11) JR441_10270 PF00356 Bacterial regulatory proteins, lacI family JR441_10275 PF00232 Glycosyl hydrolase family 1 JR441_10290 PF00528 Binding-protein-dependent transport system inner membrane component JR441_10295 PF00528 Binding-protein-dependent transport system inner membrane component JR441_10300 PF16874 Glycosyl hydrolase family 36 C-terminal domain JR441_10300 PF16875 Glycosyl hydrolase family 36 N-terminal domain JR441_10305 PF00480 ROK family JR441_10315 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JR441_10315 PF04740 LXG domain of WXG superfamily JR441_10320 PF09346 SMI1 / KNR4 family (SUKH-1) JR441_10325 PF01593 Flavin containing amine oxidoreductase JR441_10330 PF01588 Putative tRNA binding domain JR441_10335 PF07883 Cupin domain JR441_10335 PF12833 Helix-turn-helix domain JR441_10340 PF00583 Acetyltransferase (GNAT) family JR441_10345 PF13305 Tetracyclin repressor-like, C-terminal domain JR441_10345 PF00440 Bacterial regulatory proteins, tetR family JR441_10350 PF00753 Metallo-beta-lactamase superfamily JR441_10355 PF06445 GyrI-like small molecule binding domain JR441_10360 PF13280 WYL domain JR441_10360 PF08279 HTH domain JR441_10370 PF01022 Bacterial regulatory protein, arsR family JR441_10380 PF04238 Protein of unknown function (DUF420) JR441_10385 PF18846 Bacterial archaeo-eukaryotic release factor family 5 JR441_10400 PF00487 Fatty acid desaturase JR441_10405 PF07730 Histidine kinase JR441_10410 PF00196 Bacterial regulatory proteins, luxR family JR441_10410 PF00072 Response regulator receiver domain JR441_10415 PF06725 3D domain JR441_10415 PF01476 LysM domain JR441_10420 PF00271 Helicase conserved C-terminal domain JR441_10420 PF00270 DEAD/DEAH box helicase JR441_10420 PF00570 HRDC domain JR441_10420 PF16124 RecQ zinc-binding JR441_10420 PF09382 RQC domain JR441_10430 PF02525 Flavodoxin-like fold JR441_10435 PF01258 Prokaryotic dksA/traR C4-type zinc finger JR441_10450 PF00011 Hsp20/alpha crystallin family JR441_10465 PF08000 Bacterial PH domain JR441_10475 PF00171 Aldehyde dehydrogenase family JR441_10480 PF13249 Squalene-hopene cyclase N-terminal domain JR441_10480 PF13243 Squalene-hopene cyclase C-terminal domain JR441_10485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JR441_10485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JR441_10490 PF00209 Sodium:neurotransmitter symporter family JR441_10495 PF01758 Sodium Bile acid symporter family JR441_10500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR441_10500 PF02817 e3 binding domain JR441_10500 PF00364 Biotin-requiring enzyme JR441_10505 PF16870 2-oxoglutarate dehydrogenase C-terminal JR441_10505 PF02779 Transketolase, pyrimidine binding domain JR441_10505 PF00676 Dehydrogenase E1 component JR441_10510 PF00092 von Willebrand factor type A domain JR441_10515 PF07728 AAA domain (dynein-related subfamily) JR441_10520 PF00080 Copper/zinc superoxide dismutase (SODC) JR441_10520 PF13627 Prokaryotic lipoprotein-attachment site JR441_10525 PF00877 NlpC/P60 family JR441_10525 PF01476 LysM domain JR441_10530 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JR441_10535 PF10372 Bacterial membrane-spanning protein N-terminus JR441_10535 PF02457 DisA bacterial checkpoint controller nucleotide-binding JR441_10540 PF01554 MatE JR441_10545 PF01740 STAS domain JR441_10550 PF02585 GlcNAc-PI de-N-acetylase JR441_10555 PF08830 Protein of unknown function (DUF1806) JR441_10565 PF00892 EamA-like transporter family JR441_10580 PF02447 GntP family permease JR441_10585 PF14552 Tautomerase enzyme JR441_10590 PF01638 HxlR-like helix-turn-helix JR441_10595 PF00881 Nitroreductase family JR441_10600 PF01738 Dienelactone hydrolase family JR441_10605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_10610 PF11755 Protein of unknown function (DUF3311) JR441_10615 PF00474 Sodium:solute symporter family JR441_10620 PF01471 Putative peptidoglycan binding domain JR441_10620 PF17820 PDZ domain JR441_10620 PF03572 Peptidase family S41 JR441_10625 PF08241 Methyltransferase domain JR441_10635 PF02557 D-alanyl-D-alanine carboxypeptidase JR441_10640 PF01048 Phosphorylase superfamily JR441_10650 PF14191 YodL-like JR441_10655 PF01569 PAP2 superfamily JR441_10660 PF14162 YozD-like protein JR441_10675 PF06855 YozE SAM-like fold JR441_10680 PF14122 YokU-like protein, putative antitoxin JR441_10685 PF12544 Lysine-2,3-aminomutase JR441_10690 PF00583 Acetyltransferase (GNAT) family JR441_10695 PF07687 Peptidase dimerisation domain JR441_10695 PF01546 Peptidase family M20/M25/M40 JR441_10700 PF01144 Coenzyme A transferase JR441_10705 PF01144 Coenzyme A transferase JR441_10710 PF00202 Aminotransferase class-III JR441_10725 PF00583 Acetyltransferase (GNAT) family JR441_10730 PF00535 Glycosyl transferase family 2 JR441_10745 PF12996 DUF based on E. rectale Gene description (DUF3880) JR441_10750 PF02333 Phytase JR441_10755 PF02719 Polysaccharide biosynthesis protein JR441_10760 PF01641 SelR domain JR441_10765 PF01625 Peptide methionine sulfoxide reductase JR441_10770 PF01047 MarR family JR441_10775 PF01554 MatE JR441_10780 PF17431 Uncharacterized YmpT-like JR441_10785 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JR441_10790 PF13472 GDSL-like Lipase/Acylhydrolase family JR441_10795 PF02630 SCO1/SenC JR441_10800 PF10751 Protein of unknown function (DUF2535) JR441_10805 PF00291 Pyridoxal-phosphate dependent enzyme JR441_10805 PF00585 C-terminal regulatory domain of Threonine dehydratase JR441_10810 PF00158 Sigma-54 interaction domain JR441_10810 PF08461 Ribonuclease R winged-helix domain JR441_10815 PF03006 Haemolysin-III related JR441_10825 PF00186 Dihydrofolate reductase JR441_10830 PF00303 Thymidylate synthase JR441_10835 PF04608 Phosphatidylglycerophosphatase A JR441_10840 PF14005 YpjP-like protein JR441_10845 PF04445 Putative SAM-dependent methyltransferase JR441_10850 PF06491 Disulphide isomerase JR441_10855 PF00920 Dehydratase family JR441_10860 PF08712 Scaffold protein Nfu/NifU N terminal JR441_10860 PF13769 Virulence factor JR441_10865 PF01966 HD domain JR441_10870 PF00255 Glutathione peroxidase JR441_10875 PF04204 Homoserine O-succinyltransferase JR441_10880 PF00534 Glycosyl transferases group 1 JR441_10880 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JR441_10890 PF00313 'Cold-shock' DNA-binding domain JR441_10900 PF10819 Protein of unknown function (DUF2564) JR441_10905 PF10782 Zinc-finger JR441_10910 PF13456 Reverse transcriptase-like JR441_10915 PF02592 Putative vitamin uptake transporter JR441_10920 PF13456 Reverse transcriptase-like JR441_10930 PF01367 5'-3' exonuclease, C-terminal SAM fold JR441_10930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JR441_10940 PF10752 Protein of unknown function (DUF2533) JR441_10945 PF00350 Dynamin family JR441_10955 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JR441_10960 PF02797 Chalcone and stilbene synthases, C-terminal domain JR441_10960 PF00195 Chalcone and stilbene synthases, N-terminal domain JR441_10965 PF00860 Permease family JR441_10970 PF00156 Phosphoribosyl transferase domain JR441_10975 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JR441_10980 PF03812 2-keto-3-deoxygluconate permease JR441_10985 PF01081 KDPG and KHG aldolase JR441_10990 PF00294 pfkB family carbohydrate kinase JR441_10995 PF00356 Bacterial regulatory proteins, lacI family JR441_11000 PF04962 KduI/IolB family JR441_11010 PF13307 Helicase C-terminal domain JR441_11020 PF14139 YpzG-like protein JR441_11025 PF02926 THUMP domain JR441_11025 PF01170 Putative RNA methylase family UPF0020 JR441_11035 PF05103 DivIVA protein JR441_11040 PF06908 YspA SLOG family JR441_11045 PF11122 Inner spore coat protein D JR441_11055 PF13482 RNase_H superfamily JR441_11060 PF09369 Domain of unknown function (DUF1998) JR441_11060 PF00271 Helicase conserved C-terminal domain JR441_11060 PF00270 DEAD/DEAH box helicase JR441_11065 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR441_11075 PF14179 YppG-like protein JR441_11080 PF14178 YppF-like protein JR441_11085 PF08807 Bacterial domain of unknown function (DUF1798) JR441_11090 PF17522 Family of unknown function (DUF5446) JR441_11100 PF10720 Protein of unknown function (DUF2515) JR441_11105 PF03838 Recombination protein U JR441_11110 PF00912 Transglycosylase JR441_11110 PF00905 Penicillin binding protein transpeptidase domain JR441_11120 PF00633 Helix-hairpin-helix motif JR441_11120 PF00730 HhH-GPD superfamily base excision DNA repair protein JR441_11120 PF10576 Iron-sulfur binding domain of endonuclease III JR441_11125 PF07261 Replication initiation and membrane attachment JR441_11130 PF01336 OB-fold nucleic acid binding domain JR441_11130 PF00152 tRNA synthetases class II (D, K and N) JR441_11135 PF00155 Aminotransferase class I and II JR441_11140 PF03413 Peptidase propeptide and YPEB domain JR441_11140 PF17881 Domain of unknown function (DUF5590) JR441_11145 PF14084 Protein of unknown function (DUF4264) JR441_11150 PF04851 Type III restriction enzyme, res subunit JR441_11150 PF13307 Helicase C-terminal domain JR441_11150 PF00929 Exonuclease JR441_11155 PF02261 Aspartate decarboxylase JR441_11160 PF02569 Pantoate-beta-alanine ligase JR441_11165 PF02548 Ketopantoate hydroxymethyltransferase JR441_11170 PF03099 Biotin/lipoate A/B protein ligase family JR441_11170 PF02237 Biotin protein ligase C terminal domain JR441_11170 PF08279 HTH domain JR441_11175 PF12627 Probable RNA and SrmB- binding site of polymerase A JR441_11175 PF13735 tRNA nucleotidyltransferase domain 2 putative JR441_11175 PF01743 Poly A polymerase head domain JR441_11180 PF00534 Glycosyl transferases group 1 JR441_11180 PF13439 Glycosyltransferase Family 4 JR441_11185 PF02585 GlcNAc-PI de-N-acetylase JR441_11190 PF02142 MGS-like domain JR441_11195 PF05173 Dihydrodipicolinate reductase, C-terminus JR441_11195 PF01113 Dihydrodipicolinate reductase, N-terminus JR441_11200 PF03819 MazG nucleotide pyrophosphohydrolase domain JR441_11205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JR441_11205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JR441_11210 PF09577 Sporulation protein YpjB (SpoYpjB) JR441_11215 PF07187 Protein of unknown function (DUF1405) JR441_11220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JR441_11220 PF00032 Cytochrome b(C-terminal)/b6/petD JR441_11225 PF00033 Cytochrome b/b6/petB JR441_11230 PF00355 Rieske [2Fe-2S] domain JR441_11235 PF10673 Protein of unknown function (DUF2487) JR441_11240 PF08864 UPF0302 domain JR441_11240 PF08858 IDEAL domain JR441_11250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JR441_11255 PF02153 Prephenate dehydrogenase JR441_11255 PF01842 ACT domain JR441_11260 PF00155 Aminotransferase class I and II JR441_11265 PF00290 Tryptophan synthase alpha chain JR441_11270 PF00291 Pyridoxal-phosphate dependent enzyme JR441_11275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JR441_11280 PF00218 Indole-3-glycerol phosphate synthase JR441_11285 PF02885 Glycosyl transferase family, helical bundle domain JR441_11285 PF00591 Glycosyl transferase family, a/b domain JR441_11290 PF04715 Anthranilate synthase component I, N terminal region JR441_11290 PF00425 chorismate binding enzyme JR441_11295 PF07736 Chorismate mutase type I JR441_11300 PF01761 3-dehydroquinate synthase JR441_11305 PF01264 Chorismate synthase JR441_11310 PF03705 CheR methyltransferase, all-alpha domain JR441_11310 PF01739 CheR methyltransferase, SAM binding domain JR441_11315 PF00334 Nucleoside diphosphate kinase JR441_11320 PF00348 Polyprenyl synthetase JR441_11325 PF01209 ubiE/COQ5 methyltransferase family JR441_11330 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JR441_11335 PF02081 Tryptophan RNA-binding attenuator protein JR441_11340 PF01227 GTP cyclohydrolase I JR441_11345 PF00216 Bacterial DNA-binding protein JR441_11350 PF09547 Stage IV sporulation protein A (spore_IV_A) JR441_11360 PF10966 Protein of unknown function (DUF2768) JR441_11365 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JR441_11365 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JR441_11370 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JR441_11370 PF01926 50S ribosome-binding GTPase JR441_11380 PF14045 YIEGIA protein JR441_11390 PF14140 YpzI-like protein JR441_11395 PF01070 FMN-dependent dehydrogenase JR441_11400 PF00575 S1 RNA binding domain JR441_11405 PF02224 Cytidylate kinase JR441_11410 PF17313 Family of unknown function (DUF5359) JR441_11415 PF07238 PilZ domain JR441_11415 PF12945 Flagellar protein YcgR JR441_11420 PF03413 Peptidase propeptide and YPEB domain JR441_11420 PF14620 YpeB sporulation JR441_11425 PF07486 Cell Wall Hydrolase JR441_11425 PF01471 Putative peptidoglycan binding domain JR441_11430 PF13367 PrsW family intramembrane metalloprotease JR441_11440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JR441_11440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JR441_11445 PF05389 Negative regulator of genetic competence (MecA) JR441_11450 PF00149 Calcineurin-like phosphoesterase JR441_11455 PF10864 Protein of unknown function (DUF2663) JR441_11460 PF01476 LysM domain JR441_11465 PF02517 CPBP intramembrane metalloprotease JR441_11470 PF00270 DEAD/DEAH box helicase JR441_11470 PF00271 Helicase conserved C-terminal domain JR441_11475 PF14493 Helix-turn-helix domain JR441_11485 PF12822 ECF transporter, substrate-specific component JR441_11490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR441_11490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR441_11490 PF01842 ACT domain JR441_11495 PF01487 Type I 3-dehydroquinase JR441_11505 PF04542 Sigma-70 region 2 JR441_11505 PF08281 Sigma-70, region 4 JR441_11510 PF00512 His Kinase A (phospho-acceptor) domain JR441_11510 PF18698 Histidine kinase sensor domain JR441_11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_11510 PF00672 HAMP domain JR441_11510 PF00989 PAS fold JR441_11515 PF00486 Transcriptional regulatory protein, C terminal JR441_11515 PF00072 Response regulator receiver domain JR441_11520 PF01578 Cytochrome C assembly protein JR441_11525 PF05140 ResB-like family JR441_11530 PF00578 AhpC/TSA family JR441_11535 PF00849 RNA pseudouridylate synthase JR441_11535 PF01479 S4 domain JR441_11540 PF07670 Nucleoside recognition JR441_11545 PF07670 Nucleoside recognition JR441_11550 PF00768 D-alanyl-D-alanine carboxypeptidase JR441_11550 PF07943 Penicillin-binding protein 5, C-terminal domain JR441_11555 PF13047 Protein of unknown function (DUF3907) JR441_11560 PF04079 Segregation and condensation complex subunit ScpB JR441_11565 PF02616 Segregation and condensation protein ScpA JR441_11570 PF03745 Domain of unknown function (DUF309) JR441_11575 PF00583 Acetyltransferase (GNAT) family JR441_11580 PF00885 6,7-dimethyl-8-ribityllumazine synthase JR441_11585 PF00925 GTP cyclohydrolase II JR441_11585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JR441_11590 PF00677 Lumazine binding domain JR441_11595 PF01872 RibD C-terminal domain JR441_11595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR441_11605 PF10502 Signal peptidase, peptidase S26 JR441_11615 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) JR441_11635 PF10676 Spore germination protein gerPA/gerPF JR441_11640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JR441_11645 PF06207 Protein of unknown function (DUF1002) JR441_11650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JR441_11650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JR441_11655 PF03323 Bacillus/Clostridium GerA spore germination protein JR441_11660 PF14097 Stage V sporulation protein AE1 JR441_11665 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JR441_11670 PF07451 Stage V sporulation protein AD (SpoVAD) JR441_11675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JR441_11680 PF13782 Stage V sporulation protein AB JR441_11685 PF12164 Stage V sporulation protein AA JR441_11690 PF04542 Sigma-70 region 2 JR441_11690 PF04539 Sigma-70 region 3 JR441_11690 PF04545 Sigma-70, region 4 JR441_11695 PF13581 Histidine kinase-like ATPase domain JR441_11700 PF01740 STAS domain JR441_11705 PF00768 D-alanyl-D-alanine carboxypeptidase JR441_11705 PF07943 Penicillin-binding protein 5, C-terminal domain JR441_11710 PF01048 Phosphorylase superfamily JR441_11715 PF01676 Metalloenzyme superfamily JR441_11720 PF00589 Phage integrase family JR441_11720 PF02899 Phage integrase, N-terminal SAM-like domain JR441_11725 PF14004 Protein of unknown function (DUF4227) JR441_11730 PF01475 Ferric uptake regulator family JR441_11735 PF01944 Stage II sporulation protein M JR441_11745 PF03949 Malic enzyme, NAD binding domain JR441_11745 PF00390 Malic enzyme, N-terminal domain JR441_11745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR441_11750 PF03553 Na+/H+ antiporter family JR441_11755 PF00206 Lyase JR441_11755 PF10415 Fumarase C C-terminus JR441_11760 PF00710 Asparaginase, N-terminal JR441_11760 PF17763 Glutaminase/Asparaginase C-terminal domain JR441_11765 PF01381 Helix-turn-helix JR441_11775 PF00293 NUDIX domain JR441_11780 PF13072 Mother cell inhibitor of FtsZ JR441_11785 PF00248 Aldo/keto reductase family JR441_11790 PF13025 Protein of unknown function (DUF3886) JR441_11795 PF12146 Serine aminopeptidase, S33 JR441_11800 PF10827 Protein of unknown function (DUF2552) JR441_11805 PF01521 Iron-sulphur cluster biosynthesis JR441_11810 PF04229 GrpB protein JR441_11810 PF13673 Acetyltransferase (GNAT) domain JR441_11815 PF03992 Antibiotic biosynthesis monooxygenase JR441_11820 PF00583 Acetyltransferase (GNAT) family JR441_11825 PF08863 YolD-like protein JR441_11830 PF00817 impB/mucB/samB family JR441_11830 PF11799 impB/mucB/samB family C-terminal domain JR441_11835 PF14164 YqzH-like protein JR441_11840 PF07690 Major Facilitator Superfamily JR441_11855 PF00485 Phosphoribulokinase / Uridine kinase family JR441_11860 PF00291 Pyridoxal-phosphate dependent enzyme JR441_11865 PF00106 short chain dehydrogenase JR441_11870 PF00753 Metallo-beta-lactamase superfamily JR441_11875 PF03807 NADP oxidoreductase coenzyme F420-dependent JR441_11875 PF14748 Pyrroline-5-carboxylate reductase dimerisation JR441_11880 PF01546 Peptidase family M20/M25/M40 JR441_11885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JR441_11890 PF12146 Serine aminopeptidase, S33 JR441_11895 PF00471 Ribosomal protein L33 JR441_11900 PF12706 Beta-lactamase superfamily domain JR441_11905 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JR441_11905 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JR441_11910 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JR441_11910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR441_11915 PF11798 IMS family HHH motif JR441_11915 PF11799 impB/mucB/samB family C-terminal domain JR441_11915 PF00817 impB/mucB/samB family JR441_11925 PF02096 60Kd inner membrane protein JR441_11930 PF09844 Uncharacterized conserved protein (COG2071) JR441_11935 PF07687 Peptidase dimerisation domain JR441_11935 PF01546 Peptidase family M20/M25/M40 JR441_11940 PF01039 Carboxyl transferase domain JR441_11955 PF03734 L,D-transpeptidase catalytic domain JR441_11960 PF06081 Aromatic acid exporter family member 1 JR441_11960 PF11728 Putative aromatic acid exporter C-terminal domain JR441_11965 PF00005 ABC transporter JR441_11970 PF00528 Binding-protein-dependent transport system inner membrane component JR441_11975 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR441_11980 PF06491 Disulphide isomerase JR441_11985 PF00781 Diacylglycerol kinase catalytic domain JR441_11990 PF07690 Major Facilitator Superfamily JR441_11995 PF06445 GyrI-like small molecule binding domain JR441_11995 PF13411 MerR HTH family regulatory protein JR441_12000 PF02817 e3 binding domain JR441_12000 PF00364 Biotin-requiring enzyme JR441_12000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JR441_12005 PF02779 Transketolase, pyrimidine binding domain JR441_12005 PF02780 Transketolase, C-terminal domain JR441_12010 PF00676 Dehydrogenase E1 component JR441_12015 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_12015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JR441_12020 PF00871 Acetokinase family JR441_12025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JR441_12025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JR441_12030 PF01515 Phosphate acetyl/butaryl transferase JR441_12035 PF00158 Sigma-54 interaction domain JR441_12035 PF00989 PAS fold JR441_12035 PF02954 Bacterial regulatory protein, Fis family JR441_12040 PF11118 Protein of unknown function (DUF2627) JR441_12050 PF03972 MmgE/PrpD family JR441_12055 PF00285 Citrate synthase, C-terminal domain JR441_12060 PF02770 Acyl-CoA dehydrogenase, middle domain JR441_12060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR441_12060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR441_12065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JR441_12065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JR441_12070 PF02803 Thiolase, C-terminal domain JR441_12070 PF00108 Thiolase, N-terminal domain JR441_12075 PF03009 Glycerophosphoryl diester phosphodiesterase family JR441_12080 PF01520 N-acetylmuramoyl-L-alanine amidase JR441_12095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JR441_12100 PF00072 Response regulator receiver domain JR441_12100 PF08769 Sporulation initiation factor Spo0A C terminal JR441_12105 PF05580 SpoIVB peptidase S55 JR441_12105 PF17820 PDZ domain JR441_12110 PF13476 AAA domain JR441_12115 PF02863 Arginine repressor, C-terminal domain JR441_12115 PF01316 Arginine repressor, DNA binding domain JR441_12120 PF01479 S4 domain JR441_12120 PF01728 FtsJ-like methyltransferase JR441_12125 PF02780 Transketolase, C-terminal domain JR441_12125 PF02779 Transketolase, pyrimidine binding domain JR441_12125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JR441_12130 PF00348 Polyprenyl synthetase JR441_12135 PF02609 Exonuclease VII small subunit JR441_12140 PF13742 OB-fold nucleic acid binding domain JR441_12140 PF02601 Exonuclease VII, large subunit JR441_12145 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JR441_12145 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JR441_12150 PF01029 NusB family JR441_12155 PF03780 Asp23 family, cell envelope-related function JR441_12160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JR441_12160 PF02785 Biotin carboxylase C-terminal domain JR441_12160 PF00289 Biotin carboxylase, N-terminal domain JR441_12165 PF00364 Biotin-requiring enzyme JR441_12170 PF12685 SpoIIIAH-like protein JR441_12180 PF09581 Stage III sporulation protein AF (Spore_III_AF) JR441_12185 PF09546 Stage III sporulation protein AE (spore_III_AE) JR441_12190 PF06686 Stage III sporulation protein AC/AD protein family JR441_12195 PF06686 Stage III sporulation protein AC/AD protein family JR441_12200 PF09548 Stage III sporulation protein AB (spore_III_AB) JR441_12210 PF10942 Protein of unknown function (DUF2619) JR441_12215 PF01132 Elongation factor P (EF-P) OB domain JR441_12215 PF09285 Elongation factor P, C-terminal JR441_12215 PF08207 Elongation factor P (EF-P) KOW-like domain JR441_12220 PF01321 Creatinase/Prolidase N-terminal domain JR441_12220 PF00557 Metallopeptidase family M24 JR441_12225 PF01220 Dehydroquinase class II JR441_12230 PF11085 Conserved membrane protein YqhR JR441_12235 PF07136 Protein of unknown function (DUF1385) JR441_12245 PF01734 Patatin-like phospholipase JR441_12250 PF01325 Iron dependent repressor, N-terminal DNA binding domain JR441_12250 PF02742 Iron dependent repressor, metal binding and dimerisation domain JR441_12255 PF03099 Biotin/lipoate A/B protein ligase family JR441_12260 PF00581 Rhodanese-like domain JR441_12265 PF02347 Glycine cleavage system P-protein JR441_12270 PF02347 Glycine cleavage system P-protein JR441_12275 PF08669 Glycine cleavage T-protein C-terminal barrel domain JR441_12275 PF01571 Aminomethyltransferase folate-binding domain JR441_12280 PF00176 SNF2 family N-terminal domain JR441_12280 PF00271 Helicase conserved C-terminal domain JR441_12285 PF11079 Bacterial protein YqhG of unknown function JR441_12290 PF08671 Anti-repressor SinI JR441_12295 PF01381 Helix-turn-helix JR441_12295 PF08671 Anti-repressor SinI JR441_12300 PF12389 Camelysin metallo-endopeptidase JR441_12315 PF13028 Protein of unknown function (DUF3889) JR441_12320 PF14038 YqzE-like protein JR441_12325 PF14173 ComG operon protein 7 JR441_12330 PF15980 Putative Competence protein ComGF JR441_12340 PF07963 Prokaryotic N-terminal methylation motif JR441_12345 PF07963 Prokaryotic N-terminal methylation motif JR441_12350 PF00482 Type II secretion system (T2SS), protein F JR441_12355 PF00437 Type II/IV secretion system protein JR441_12360 PF00571 CBS domain JR441_12365 PF01544 CorA-like Mg2+ transporter protein JR441_12370 PF01595 Cyclin M transmembrane N-terminal domain JR441_12370 PF03471 Transporter associated domain JR441_12370 PF00571 CBS domain JR441_12375 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain JR441_12375 PF01740 STAS domain JR441_12385 PF03960 ArsC family JR441_12390 PF11117 Protein of unknown function (DUF2626) JR441_12395 PF00753 Metallo-beta-lactamase superfamily JR441_12400 PF10958 Protein of unknown function (DUF2759) JR441_12405 PF01910 Thiamine-binding protein JR441_12415 PF00246 Zinc carboxypeptidase JR441_12420 PF00884 Sulfatase JR441_12425 PF00480 ROK family JR441_12430 PF06014 Bacterial protein of unknown function (DUF910) JR441_12435 PF01694 Rhomboid family JR441_12445 PF01812 5-formyltetrahydrofolate cyclo-ligase family JR441_12450 PF00471 Ribosomal protein L33 JR441_12455 PF00534 Glycosyl transferases group 1 JR441_12455 PF13439 Glycosyltransferase Family 4 JR441_12475 PF00005 ABC transporter JR441_12480 PF00005 ABC transporter JR441_12485 PF00528 Binding-protein-dependent transport system inner membrane component JR441_12490 PF00528 Binding-protein-dependent transport system inner membrane component JR441_12495 PF12849 PBP superfamily domain JR441_12500 PF00905 Penicillin binding protein transpeptidase domain JR441_12500 PF03717 Penicillin-binding Protein dimerisation domain JR441_12505 PF07690 Major Facilitator Superfamily JR441_12510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JR441_12510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JR441_12515 PF04306 Protein of unknown function (DUF456) JR441_12520 PF06691 Protein of unknown function (DUF1189) JR441_12530 PF04551 GcpE protein JR441_12545 PF01475 Ferric uptake regulator family JR441_12550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JR441_12550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JR441_12555 PF11116 Protein of unknown function (DUF2624) JR441_12560 PF01261 Xylose isomerase-like TIM barrel JR441_12565 PF00271 Helicase conserved C-terminal domain JR441_12565 PF00270 DEAD/DEAH box helicase JR441_12570 PF14181 YqfQ-like protein JR441_12575 PF02401 LytB protein JR441_12580 PF01784 NIF3 (NGG1p interacting factor 3) JR441_12585 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JR441_12590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JR441_12595 PF00140 Sigma-70 factor, region 1.2 JR441_12595 PF04545 Sigma-70, region 4 JR441_12595 PF04539 Sigma-70 region 3 JR441_12595 PF04542 Sigma-70 region 2 JR441_12595 PF03979 Sigma-70 factor, region 1.1 JR441_12600 PF01807 CHC2 zinc finger JR441_12600 PF10410 DnaB-helicase binding domain of primase JR441_12600 PF08275 DNA primase catalytic core, N-terminal domain JR441_12605 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JR441_12610 PF03618 Kinase/pyrophosphorylase JR441_12615 PF00571 CBS domain JR441_12615 PF08279 HTH domain JR441_12620 PF02092 Glycyl-tRNA synthetase beta subunit JR441_12625 PF02091 Glycyl-tRNA synthetase alpha subunit JR441_12630 PF02565 Recombination protein O C terminal JR441_12630 PF11967 Recombination protein O N terminal JR441_12635 PF14006 YqzL-like protein JR441_12640 PF01926 50S ribosome-binding GTPase JR441_12640 PF07650 KH domain JR441_12645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR441_12650 PF01219 Prokaryotic diacylglycerol kinase JR441_12655 PF02130 Uncharacterized protein family UPF0054 JR441_12660 PF01966 HD domain JR441_12660 PF07698 7TM receptor with intracellular HD hydrolase JR441_12660 PF07697 7TM-HD extracellular JR441_12665 PF02562 PhoH-like protein JR441_12670 PF06898 Putative stage IV sporulation protein YqfD JR441_12675 PF07873 YabP family JR441_12685 PF12127 SigmaW regulon antibacterial JR441_12690 PF01972 Serine dehydrogenase proteinase JR441_12690 PF01957 NfeD-like C-terminal, partner-binding JR441_12695 PF09424 Yqey-like protein JR441_12700 PF01165 Ribosomal protein S21 JR441_12705 PF02690 Na+/Pi-cotransporter JR441_12710 PF01938 TRAM domain JR441_12710 PF00919 Uncharacterized protein family UPF0004 JR441_12710 PF04055 Radical SAM superfamily JR441_12715 PF04452 RNA methyltransferase JR441_12725 PF00226 DnaJ domain JR441_12725 PF00684 DnaJ central domain JR441_12725 PF01556 DnaJ C terminal domain JR441_12730 PF00012 Hsp70 protein JR441_12735 PF01025 GrpE JR441_12740 PF01628 HrcA protein C terminal domain JR441_12745 PF06969 HemN C-terminal domain JR441_12745 PF04055 Radical SAM superfamily JR441_12750 PF06421 GTP-binding protein LepA C-terminus JR441_12750 PF03144 Elongation factor Tu domain 2 JR441_12750 PF00679 Elongation factor G C-terminus JR441_12750 PF00009 Elongation factor Tu GTP binding domain JR441_12755 PF12438 Protein of unknown function (DUF3679) JR441_12760 PF07454 Stage II sporulation protein P (SpoIIP) JR441_12765 PF03418 Germination protease JR441_12770 PF01649 Ribosomal protein S20 JR441_12775 PF06144 DNA polymerase III, delta subunit JR441_12785 PF14141 YqzM-like protein JR441_12790 PF00753 Metallo-beta-lactamase superfamily JR441_12790 PF03772 Competence protein JR441_12790 PF13567 Domain of unknown function (DUF4131) JR441_12795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JR441_12800 PF10531 SLBB domain JR441_12805 PF14748 Pyrroline-5-carboxylate reductase dimerisation JR441_12805 PF03807 NADP oxidoreductase coenzyme F420-dependent JR441_12810 PF13649 Methyltransferase domain JR441_12820 PF01966 HD domain JR441_12825 PF01467 Cytidylyltransferase-like JR441_12830 PF01985 CRS1 / YhbY (CRM) domain JR441_12835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JR441_12835 PF01488 Shikimate / quinate 5-dehydrogenase JR441_12835 PF08501 Shikimate dehydrogenase substrate binding domain JR441_12840 PF01926 50S ribosome-binding GTPase JR441_12850 PF08970 Sporulation inhibitor A JR441_12855 PF00657 GDSL-like Lipase/Acylhydrolase JR441_12860 PF01510 N-acetylmuramoyl-L-alanine amidase JR441_12860 PF01471 Putative peptidoglycan binding domain JR441_12865 PF09335 SNARE associated Golgi protein JR441_12870 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JR441_12870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR441_12880 PF14040 Deoxyribonuclease NucA/NucB JR441_12890 PF07508 Recombinase JR441_12890 PF13408 Recombinase zinc beta ribbon domain JR441_12890 PF00239 Resolvase, N terminal domain JR441_12895 PF01451 Low molecular weight phosphotyrosine protein phosphatase JR441_12900 PF01758 Sodium Bile acid symporter family JR441_12905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_12910 PF01022 Bacterial regulatory protein, arsR family JR441_12915 PF08892 YqcI/YcgG family JR441_12935 PF00107 Zinc-binding dehydrogenase JR441_12935 PF08240 Alcohol dehydrogenase GroES-like domain JR441_12960 PF18801 response regulator aspartate phosphatase H, N terminal JR441_12960 PF13181 Tetratricopeptide repeat JR441_12975 PF14449 Pre-toxin TG JR441_12975 PF04740 LXG domain of WXG superfamily JR441_12975 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues JR441_12980 PF05076 Suppressor of fused protein (SUFU) JR441_13000 PF01471 Putative peptidoglycan binding domain JR441_13000 PF01510 N-acetylmuramoyl-L-alanine amidase JR441_13005 PF05105 Bacteriophage holin family JR441_13015 PF09693 Phage uncharacterised protein (Phage_XkdX) JR441_13020 PF09636 XkdW protein JR441_13035 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JR441_13040 PF04865 Baseplate J-like protein JR441_13045 PF10934 Protein of unknown function (DUF2634) JR441_13050 PF10844 Protein of unknown function (DUF2577) JR441_13060 PF01476 LysM domain JR441_13065 PF01464 Transglycosylase SLT domain JR441_13075 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC JR441_13080 PF09393 Phage tail tube protein JR441_13085 PF04984 Phage tail sheath protein subtilisin-like domain JR441_13085 PF17482 Phage tail sheath C-terminal domain JR441_13085 PF17481 Phage tail sheath protein beta-sandwich domain JR441_13100 PF04883 Bacteriophage HK97-gp10, putative tail-component JR441_13105 PF12206 Domain of unknown function (DUF3599) JR441_13110 PF11436 Protein of unknown function (DUF3199) JR441_13115 PF14553 YqbF, hypothetical protein domain JR441_13120 PF05065 Phage capsid family JR441_13125 PF14550 Putative phage serine protease XkdF JR441_13135 PF04233 Phage Mu protein F like protein JR441_13140 PF04860 Phage portal protein JR441_13145 PF04466 Phage terminase large subunit JR441_13145 PF17288 Terminase RNAseH like domain JR441_13150 PF10668 Phage terminase small subunit JR441_13170 PF17356 Phage-like element PBSX protein XtrA JR441_13175 PF05866 Endodeoxyribonuclease RusA JR441_13185 PF01695 IstB-like ATP binding protein JR441_13190 PF07261 Replication initiation and membrane attachment JR441_13195 PF03837 RecT family JR441_13200 PF09588 YqaJ-like viral recombinase domain JR441_13205 PF09466 Hypothetical protein Yqai JR441_13215 PF17448 Uncharacterized YqaH-like JR441_13220 PF01381 Helix-turn-helix JR441_13230 PF01381 Helix-turn-helix JR441_13235 PF01381 Helix-turn-helix JR441_13250 PF06114 IrrE N-terminal-like domain JR441_13260 PF02909 Tetracyclin repressor-like, C-terminal domain JR441_13260 PF00440 Bacterial regulatory proteins, tetR family JR441_13265 PF01554 MatE JR441_13270 PF02156 Glycosyl hydrolase family 26 JR441_13275 PF01925 Sulfite exporter TauE/SafE JR441_13280 PF01206 Sulfurtransferase TusA JR441_13285 PF00581 Rhodanese-like domain JR441_13285 PF00753 Metallo-beta-lactamase superfamily JR441_13295 PF00581 Rhodanese-like domain JR441_13295 PF01206 Sulfurtransferase TusA JR441_13300 PF13686 DsrE/DsrF/DrsH-like family JR441_13305 PF02583 Metal-sensitive transcriptional repressor JR441_13310 PF07883 Cupin domain JR441_13320 PF06445 GyrI-like small molecule binding domain JR441_13320 PF13411 MerR HTH family regulatory protein JR441_13325 PF07690 Major Facilitator Superfamily JR441_13335 PF00571 CBS domain JR441_13335 PF01595 Cyclin M transmembrane N-terminal domain JR441_13335 PF03471 Transporter associated domain JR441_13340 PF14142 YrzO-like protein JR441_13345 PF00892 EamA-like transporter family JR441_13350 PF03466 LysR substrate binding domain JR441_13350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_13360 PF01545 Cation efflux family JR441_13360 PF16916 Dimerisation domain of Zinc Transporter JR441_13365 PF14552 Tautomerase enzyme JR441_13370 PF03466 LysR substrate binding domain JR441_13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_13380 PF05525 Branched-chain amino acid transport protein JR441_13385 PF05437 Branched-chain amino acid transport protein (AzlD) JR441_13390 PF03591 AzlC protein JR441_13395 PF01037 Lrp/AsnC ligand binding domain JR441_13405 PF00067 Cytochrome P450 JR441_13415 PF00857 Isochorismatase family JR441_13420 PF10823 Protein of unknown function (DUF2568) JR441_13430 PF05163 DinB family JR441_13435 PF04439 Streptomycin adenylyltransferase JR441_13440 PF03060 Nitronate monooxygenase JR441_13445 PF01177 Asp/Glu/Hydantoin racemase JR441_13450 PF15493 Domain of unknown function, YrpD JR441_13455 PF09680 Family of unknown function JR441_13465 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JR441_13470 PF08281 Sigma-70, region 4 JR441_13470 PF04542 Sigma-70 region 2 JR441_13475 PF00248 Aldo/keto reductase family JR441_13480 PF03600 Citrate transporter JR441_13485 PF03466 LysR substrate binding domain JR441_13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_13490 PF04303 PrpF protein JR441_13495 PF01374 Glycosyl hydrolase family 46 JR441_13505 PF00561 alpha/beta hydrolase fold JR441_13525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_13535 PF07875 Coat F domain JR441_13540 PF08240 Alcohol dehydrogenase GroES-like domain JR441_13540 PF13823 Alcohol dehydrogenase GroES-associated JR441_13540 PF00107 Zinc-binding dehydrogenase JR441_13550 PF07875 Coat F domain JR441_13555 PF13411 MerR HTH family regulatory protein JR441_13565 PF08240 Alcohol dehydrogenase GroES-like domain JR441_13565 PF00107 Zinc-binding dehydrogenase JR441_13570 PF01965 DJ-1/PfpI family JR441_13575 PF00251 Glycosyl hydrolases family 32 N-terminal domain JR441_13575 PF08244 Glycosyl hydrolases family 32 C terminal JR441_13580 PF03613 PTS system mannose/fructose/sorbose family IID component JR441_13585 PF03609 PTS system sorbose-specific iic component JR441_13590 PF03830 PTS system sorbose subfamily IIB component JR441_13595 PF03610 PTS system fructose IIA component JR441_13600 PF03610 PTS system fructose IIA component JR441_13600 PF00874 PRD domain JR441_13600 PF00158 Sigma-54 interaction domain JR441_13610 PF00324 Amino acid permease JR441_13615 PF01810 LysE type translocator JR441_13620 PF11495 Archaeal transcriptional regulator TrmB JR441_13620 PF01978 Sugar-specific transcriptional regulator TrmB JR441_13625 PF08281 Sigma-70, region 4 JR441_13625 PF04542 Sigma-70 region 2 JR441_13630 PF11738 Protein of unknown function (DUF3298) JR441_13630 PF13739 Deacetylase PdaC JR441_13640 PF14145 YrhK-like protein JR441_13645 PF00667 FAD binding domain JR441_13645 PF00258 Flavodoxin JR441_13645 PF00175 Oxidoreductase NAD-binding domain JR441_13645 PF00067 Cytochrome P450 JR441_13650 PF00440 Bacterial regulatory proteins, tetR family JR441_13650 PF16295 Tetracyclin repressor-like, C-terminal domain JR441_13655 PF08241 Methyltransferase domain JR441_13665 PF09501 Probable sporulation protein (Bac_small_yrzI) JR441_13670 PF01226 Formate/nitrite transporter JR441_13675 PF10057 Uncharacterized conserved protein (DUF2294) JR441_13680 PF00037 4Fe-4S binding domain JR441_13680 PF01568 Molydopterin dinucleotide binding domain JR441_13680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JR441_13680 PF00384 Molybdopterin oxidoreductase JR441_13680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR441_13685 PF07849 Protein of unknown function (DUF1641) JR441_13690 PF14143 YrhC-like protein JR441_13695 PF01053 Cys/Met metabolism PLP-dependent enzyme JR441_13700 PF00291 Pyridoxal-phosphate dependent enzyme JR441_13705 PF01048 Phosphorylase superfamily JR441_13710 PF13649 Methyltransferase domain JR441_13715 PF10750 Protein of unknown function (DUF2536) JR441_13720 PF07423 Domain of unknown function (DUF1510) JR441_13725 PF03717 Penicillin-binding Protein dimerisation domain JR441_13725 PF00905 Penicillin binding protein transpeptidase domain JR441_13730 PF03449 Transcription elongation factor, N-terminal JR441_13730 PF01272 Transcription elongation factor, GreA/GreB, C-term JR441_13735 PF00485 Phosphoribulokinase / Uridine kinase family JR441_13740 PF01136 Peptidase family U32 JR441_13740 PF16325 Peptidase family U32 C-terminal domain JR441_13745 PF01136 Peptidase family U32 JR441_13750 PF01596 O-methyltransferase JR441_13755 PF02618 YceG-like family JR441_13760 PF06949 Protein of unknown function (DUF1292) JR441_13765 PF03652 Holliday junction resolvase JR441_13770 PF06135 IreB regulatory phosphoprotein JR441_13775 PF02272 DHHA1 domain JR441_13775 PF01411 tRNA synthetases class II (A) JR441_13775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JR441_13780 PF01594 AI-2E family transporter JR441_13785 PF00005 ABC transporter JR441_13790 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR441_13795 PF00528 Binding-protein-dependent transport system inner membrane component JR441_13800 PF00528 Binding-protein-dependent transport system inner membrane component JR441_13805 PF13056 Protein of unknown function (DUF3918) JR441_13815 PF05239 PRC-barrel domain JR441_13820 PF14490 Helix-hairpin-helix containing domain JR441_13820 PF13538 UvrD-like helicase C-terminal domain JR441_13820 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JR441_13825 PF07719 Tetratricopeptide repeat JR441_13825 PF13181 Tetratricopeptide repeat JR441_13835 PF00266 Aminotransferase class-V JR441_13840 PF02082 Transcriptional regulator JR441_13845 PF05496 Holliday junction DNA helicase RuvB P-loop domain JR441_13845 PF16193 AAA C-terminal domain JR441_13845 PF12002 MgsA AAA+ ATPase C terminal JR441_13850 PF00899 ThiF family JR441_13860 PF00152 tRNA synthetases class II (D, K and N) JR441_13860 PF01336 OB-fold nucleic acid binding domain JR441_13860 PF02938 GAD domain JR441_13865 PF13393 Histidyl-tRNA synthetase JR441_13865 PF03129 Anticodon binding domain JR441_13870 PF17449 Uncharacterized YrzK-like JR441_13875 PF08239 Bacterial SH3 domain JR441_13875 PF01520 N-acetylmuramoyl-L-alanine amidase JR441_13880 PF02580 D-Tyr-tRNA(Tyr) deacylase JR441_13885 PF13291 ACT domain JR441_13885 PF04607 Region found in RelA / SpoT proteins JR441_13885 PF02824 TGS domain JR441_13890 PF00156 Phosphoribosyl transferase domain JR441_13895 PF17768 RecJ OB domain JR441_13895 PF02272 DHHA1 domain JR441_13895 PF01368 DHH family JR441_13895 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JR441_13900 PF06305 Lipopolysaccharide assembly protein A domain JR441_13905 PF02080 TrkA-C domain JR441_13910 PF02355 Protein export membrane protein JR441_13910 PF07549 SecD/SecF GG Motif JR441_13915 PF13797 Post-transcriptional regulator JR441_13920 PF14667 Polysaccharide biosynthesis C-terminal domain JR441_13920 PF01943 Polysaccharide biosynthesis protein JR441_13925 PF04239 Protein of unknown function (DUF421) JR441_13930 PF12670 Protein of unknown function (DUF3792) JR441_13935 PF02699 Preprotein translocase subunit JR441_13940 PF01702 Queuine tRNA-ribosyltransferase JR441_13945 PF02547 Queuosine biosynthesis protein JR441_13950 PF11146 Protein of unknown function (DUF2905) JR441_13955 PF05491 RuvB C-terminal winged helix domain JR441_13955 PF17864 RuvB AAA lid domain JR441_13955 PF05496 Holliday junction DNA helicase RuvB P-loop domain JR441_13960 PF01330 RuvA N terminal domain JR441_13960 PF07499 RuvA, C-terminal domain JR441_13965 PF08977 Bypass of Forespore C, N terminal JR441_13965 PF08955 BofC C-terminal domain JR441_13970 PF07690 Major Facilitator Superfamily JR441_13975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR441_13975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR441_14000 PF01235 Sodium:alanine symporter family JR441_14005 PF01709 Transcriptional regulator JR441_14010 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JR441_14015 PF01476 LysM domain JR441_14020 PF02445 Quinolinate synthetase A protein JR441_14025 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JR441_14025 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JR441_14030 PF02910 Fumarate reductase flavoprotein C-term JR441_14030 PF00890 FAD binding domain JR441_14035 PF00266 Aminotransferase class-V JR441_14040 PF08279 HTH domain JR441_14040 PF02829 3H domain JR441_14045 PF01842 ACT domain JR441_14045 PF00800 Prephenate dehydratase JR441_14050 PF01842 ACT domain JR441_14055 PF09269 Domain of unknown function (DUF1967) JR441_14055 PF01018 GTP1/OBG JR441_14055 PF01926 50S ribosome-binding GTPase JR441_14060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JR441_14060 PF14682 Sporulation initiation phospho-transferase B, C-terminal JR441_14070 PF01016 Ribosomal L27 protein JR441_14075 PF04327 Cysteine protease Prp JR441_14080 PF00829 Ribosomal prokaryotic L21 protein JR441_14085 PF02163 Peptidase family M50 JR441_14090 PF01551 Peptidase family M23 JR441_14095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JR441_14100 PF03775 Septum formation inhibitor MinC, C-terminal domain JR441_14105 PF04093 rod shape-determining protein MreD JR441_14110 PF04085 rod shape-determining protein MreC JR441_14120 PF04002 RadC-like JAB domain JR441_14120 PF00633 Helix-hairpin-helix motif JR441_14125 PF02545 Maf-like protein JR441_14130 PF05036 Sporulation related domain JR441_14135 PF06750 Bacterial Peptidase A24 N-terminal domain JR441_14135 PF01478 Type IV leader peptidase family JR441_14140 PF02875 Mur ligase family, glutamate ligase domain JR441_14140 PF08245 Mur ligase middle domain JR441_14145 PF08264 Anticodon-binding domain of tRNA JR441_14145 PF00133 tRNA synthetases class I (I, L, M and V) JR441_14145 PF10458 Valyl tRNA synthetase tRNA binding arm JR441_14160 PF01476 LysM domain JR441_14165 PF00202 Aminotransferase class-III JR441_14170 PF00490 Delta-aminolevulinic acid dehydratase JR441_14175 PF02602 Uroporphyrinogen-III synthase HemD JR441_14180 PF03900 Porphobilinogen deaminase, C-terminal domain JR441_14180 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JR441_14185 PF01578 Cytochrome C assembly protein JR441_14190 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JR441_14190 PF01488 Shikimate / quinate 5-dehydrogenase JR441_14190 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JR441_14200 PF01926 50S ribosome-binding GTPase JR441_14205 PF00004 ATPase family associated with various cellular activities (AAA) JR441_14205 PF02190 ATP-dependent protease La (LON) substrate-binding domain JR441_14205 PF05362 Lon protease (S16) C-terminal proteolytic domain JR441_14210 PF00004 ATPase family associated with various cellular activities (AAA) JR441_14210 PF05362 Lon protease (S16) C-terminal proteolytic domain JR441_14215 PF10431 C-terminal, D2-small domain, of ClpB protein JR441_14215 PF07724 AAA domain (Cdc48 subfamily) JR441_14215 PF06689 ClpX C4-type zinc finger JR441_14220 PF05698 Bacterial trigger factor protein (TF) C-terminus JR441_14220 PF05697 Bacterial trigger factor protein (TF) JR441_14220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JR441_14230 PF00694 Aconitase C-terminal domain JR441_14235 PF00330 Aconitase family (aconitate hydratase) JR441_14240 PF00180 Isocitrate/isopropylmalate dehydrogenase JR441_14245 PF00682 HMGL-like JR441_14245 PF08502 LeuA allosteric (dimerisation) domain JR441_14250 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JR441_14250 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JR441_14255 PF01842 ACT domain JR441_14255 PF10369 Small subunit of acetolactate synthase JR441_14260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR441_14260 PF00205 Thiamine pyrophosphate enzyme, central domain JR441_14260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR441_14270 PF00583 Acetyltransferase (GNAT) family JR441_14275 PF09557 Domain of unknown function (DUF2382) JR441_14275 PF11181 Heat induced stress protein YflT JR441_14285 PF12850 Calcineurin-like phosphoesterase superfamily domain JR441_14290 PF01725 Ham1 family JR441_14295 PF01138 3' exoribonuclease family, domain 1 JR441_14295 PF03725 3' exoribonuclease family, domain 2 JR441_14300 PF10646 Sporulation and spore germination JR441_14305 PF01177 Asp/Glu/Hydantoin racemase JR441_14310 PF01047 MarR family JR441_14315 PF00196 Bacterial regulatory proteins, luxR family JR441_14320 PF03061 Thioesterase superfamily JR441_14325 PF13085 2Fe-2S iron-sulfur cluster binding domain JR441_14325 PF13183 4Fe-4S dicluster domain JR441_14330 PF00890 FAD binding domain JR441_14330 PF02910 Fumarate reductase flavoprotein C-term JR441_14335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JR441_14340 PF10702 Protein of unknown function (DUF2507) JR441_14345 PF13840 ACT domain JR441_14345 PF01842 ACT domain JR441_14345 PF00696 Amino acid kinase family JR441_14350 PF01541 GIY-YIG catalytic domain JR441_14350 PF02151 UvrB/uvrC motif JR441_14350 PF08459 UvrC Helix-hairpin-helix N-terminal JR441_14355 PF00085 Thioredoxin JR441_14360 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JR441_14365 PF01012 Electron transfer flavoprotein domain JR441_14365 PF00766 Electron transfer flavoprotein FAD-binding domain JR441_14370 PF01012 Electron transfer flavoprotein domain JR441_14375 PF00378 Enoyl-CoA hydratase/isomerase JR441_14380 PF08359 YsiA-like protein, C-terminal region JR441_14380 PF00440 Bacterial regulatory proteins, tetR family JR441_14385 PF13193 AMP-binding enzyme C-terminal domain JR441_14385 PF00501 AMP-binding enzyme JR441_14390 PF03994 Domain of Unknown Function (DUF350) JR441_14395 PF01713 Smr domain JR441_14395 PF00488 MutS domain V JR441_14400 PF14791 DNA polymerase beta thumb JR441_14400 PF14716 Helix-hairpin-helix domain JR441_14400 PF02811 PHP domain JR441_14405 PF02674 Colicin V production protein JR441_14410 PF05164 Cell division protein ZapA JR441_14415 PF01351 Ribonuclease HII JR441_14415 PF11858 Domain of unknown function (DUF3378) JR441_14420 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JR441_14420 PF03484 tRNA synthetase B5 domain JR441_14420 PF01588 Putative tRNA binding domain JR441_14420 PF03483 B3/4 domain JR441_14420 PF03147 Ferredoxin-fold anticodon binding domain JR441_14425 PF01409 tRNA synthetases class II core domain (F) JR441_14425 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JR441_14435 PF00588 SpoU rRNA Methylase family JR441_14435 PF08032 RNA 2'-O ribose methyltransferase substrate binding JR441_14440 PF14098 Small, acid-soluble spore protein I JR441_14445 PF13556 PucR C-terminal helix-turn-helix domain JR441_14445 PF17853 GGDEF-like domain JR441_14445 PF05651 Putative sugar diacid recognition JR441_14450 PF01565 FAD binding domain JR441_14450 PF02913 FAD linked oxidases, C-terminal domain JR441_14455 PF13183 4Fe-4S dicluster domain JR441_14455 PF02754 Cysteine-rich domain JR441_14460 PF12681 Glyoxalase-like domain JR441_14465 PF02554 Carbon starvation protein CstA JR441_14465 PF13722 5TM C-terminal transporter carbon starvation CstA JR441_14470 PF06964 Alpha-L-arabinofuranosidase C-terminal domain JR441_14475 PF00528 Binding-protein-dependent transport system inner membrane component JR441_14480 PF00528 Binding-protein-dependent transport system inner membrane component JR441_14485 PF01547 Bacterial extracellular solute-binding protein JR441_14490 PF13685 Iron-containing alcohol dehydrogenase JR441_14495 PF13344 Haloacid dehalogenase-like hydrolase JR441_14500 PF00596 Class II Aldolase and Adducin N-terminal domain JR441_14505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR441_14505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR441_14510 PF11762 L-arabinose isomerase C-terminal domain JR441_14510 PF02610 L-arabinose isomerase JR441_14515 PF04616 Glycosyl hydrolases family 43 JR441_14520 PF05343 M42 glutamyl aminopeptidase JR441_14530 PF06961 Protein of unknown function (DUF1294) JR441_14535 PF00453 Ribosomal protein L20 JR441_14540 PF01632 Ribosomal protein L35 JR441_14545 PF00707 Translation initiation factor IF-3, C-terminal domain JR441_14545 PF05198 Translation initiation factor IF-3, N-terminal domain JR441_14555 PF04172 LrgB-like family JR441_14560 PF03788 LrgA family JR441_14565 PF04397 LytTr DNA-binding domain JR441_14565 PF00072 Response regulator receiver domain JR441_14570 PF06580 Histidine kinase JR441_14570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_14570 PF07694 5TMR of 5TMR-LYT JR441_14575 PF13419 Haloacid dehalogenase-like hydrolase JR441_14580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JR441_14580 PF02824 TGS domain JR441_14580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR441_14580 PF03129 Anticodon binding domain JR441_14585 PF08812 YtxC-like family JR441_14590 PF09335 SNARE associated Golgi protein JR441_14595 PF01695 IstB-like ATP binding protein JR441_14595 PF07319 Primosomal protein DnaI N-terminus JR441_14600 PF07261 Replication initiation and membrane attachment JR441_14605 PF03477 ATP cone domain JR441_14610 PF02675 S-adenosylmethionine decarboxylase JR441_14615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JR441_14615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JR441_14620 PF01638 HxlR-like helix-turn-helix JR441_14625 PF07690 Major Facilitator Superfamily JR441_14630 PF00248 Aldo/keto reductase family JR441_14635 PF01121 Dephospho-CoA kinase JR441_14640 PF02659 Putative manganese efflux pump JR441_14645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JR441_14645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JR441_14645 PF06827 Zinc finger found in FPG and IleRS JR441_14650 PF00476 DNA polymerase family A JR441_14650 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JR441_14650 PF01367 5'-3' exonuclease, C-terminal SAM fold JR441_14655 PF00512 His Kinase A (phospho-acceptor) domain JR441_14655 PF00989 PAS fold JR441_14655 PF16736 Single Cache-like JR441_14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_14660 PF00486 Transcriptional regulatory protein, C terminal JR441_14660 PF00072 Response regulator receiver domain JR441_14665 PF00056 lactate/malate dehydrogenase, NAD binding domain JR441_14665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JR441_14670 PF00180 Isocitrate/isopropylmalate dehydrogenase JR441_14675 PF00285 Citrate synthase, C-terminal domain JR441_14680 PF04284 Protein of unknown function (DUF441) JR441_14685 PF01594 AI-2E family transporter JR441_14690 PF04186 FxsA cytoplasmic membrane protein JR441_14695 PF00391 PEP-utilising enzyme, mobile domain JR441_14695 PF00224 Pyruvate kinase, barrel domain JR441_14695 PF02887 Pyruvate kinase, alpha/beta domain JR441_14700 PF00365 Phosphofructokinase JR441_14705 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JR441_14710 PF17848 Acetyl-coA carboxylase zinc finger domain JR441_14710 PF01039 Carboxyl transferase domain JR441_14715 PF00390 Malic enzyme, N-terminal domain JR441_14715 PF03949 Malic enzyme, NAD binding domain JR441_14720 PF01336 OB-fold nucleic acid binding domain JR441_14720 PF02811 PHP domain JR441_14720 PF14579 Helix-hairpin-helix motif JR441_14720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JR441_14720 PF07733 Bacterial DNA polymerase III alpha NTPase domain JR441_14725 PF14034 Sporulation protein YtrH JR441_14740 PF01368 DHH family JR441_14740 PF02272 DHHA1 domain JR441_14745 PF14007 YtpI-like protein JR441_14750 PF00571 CBS domain JR441_14750 PF07085 DRTGG domain JR441_14750 PF00392 Bacterial regulatory proteins, gntR family JR441_14750 PF03061 Thioesterase superfamily JR441_14755 PF01925 Sulfite exporter TauE/SafE JR441_14760 PF01546 Peptidase family M20/M25/M40 JR441_14760 PF07687 Peptidase dimerisation domain JR441_14765 PF01687 Riboflavin kinase JR441_14770 PF00296 Luciferase-like monooxygenase JR441_14775 PF00462 Glutaredoxin JR441_14780 PF00296 Luciferase-like monooxygenase JR441_14785 PF00005 ABC transporter JR441_14790 PF00528 Binding-protein-dependent transport system inner membrane component JR441_14795 PF00528 Binding-protein-dependent transport system inner membrane component JR441_14800 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR441_14805 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR441_14810 PF00583 Acetyltransferase (GNAT) family JR441_14815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_14815 PF03466 LysR substrate binding domain JR441_14830 PF00206 Lyase JR441_14830 PF14698 Argininosuccinate lyase C-terminal JR441_14835 PF00764 Arginosuccinate synthase JR441_14840 PF00994 Probable molybdopterin binding domain JR441_14845 PF00871 Acetokinase family JR441_14855 PF02384 N-6 DNA Methylase JR441_14860 PF08534 Redoxin JR441_14865 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JR441_14870 PF11167 Protein of unknown function (DUF2953) JR441_14875 PF06271 RDD family JR441_14880 PF01343 Peptidase family S49 JR441_14885 PF01513 ATP-NAD kinase JR441_14890 PF07969 Amidohydrolase family JR441_14895 PF00501 AMP-binding enzyme JR441_14895 PF13193 AMP-binding enzyme C-terminal domain JR441_14900 PF00269 Small, acid-soluble spore proteins, alpha/beta type JR441_14905 PF02926 THUMP domain JR441_14905 PF02568 Thiamine biosynthesis protein (ThiI) JR441_14910 PF00266 Aminotransferase class-V JR441_14915 PF05525 Branched-chain amino acid transport protein JR441_14920 PF06160 Septation ring formation regulator, EzrA JR441_14925 PF02811 PHP domain JR441_14930 PF00440 Bacterial regulatory proteins, tetR family JR441_14935 PF13185 GAF domain JR441_14940 PF00990 Diguanylate cyclase, GGDEF domain JR441_14945 PF01479 S4 domain JR441_14945 PF00163 Ribosomal protein S4/S9 N-terminal domain JR441_14950 PF00579 tRNA synthetases class I (W and Y) JR441_14950 PF01479 S4 domain JR441_14955 PF00501 AMP-binding enzyme JR441_14955 PF13193 AMP-binding enzyme C-terminal domain JR441_14960 PF00583 Acetyltransferase (GNAT) family JR441_14965 PF00571 CBS domain JR441_14970 PF00850 Histone deacetylase domain JR441_14975 PF00691 OmpA family JR441_14975 PF13677 Membrane MotB of proton-channel complex MotA/MotB JR441_14980 PF01618 MotA/TolQ/ExbB proton channel family JR441_14985 PF00356 Bacterial regulatory proteins, lacI family JR441_14990 PF01817 Chorismate mutase type II JR441_14990 PF00793 DAHP synthetase I family JR441_14995 PF11009 Protein of unknown function (DUF2847) JR441_15000 PF12732 YtxH-like protein JR441_15005 PF06103 Bacterial protein of unknown function (DUF948) JR441_15010 PF02875 Mur ligase family, glutamate ligase domain JR441_15010 PF01225 Mur ligase family, catalytic domain JR441_15010 PF08245 Mur ligase middle domain JR441_15015 PF01580 FtsK/SpoIIIE family JR441_15015 PF09397 Ftsk gamma domain JR441_15015 PF17854 FtsK alpha domain JR441_15020 PF14794 Domain of unknown function (DUF4479) JR441_15020 PF01588 Putative tRNA binding domain JR441_15025 PF07285 Protein of unknown function (DUF1444) JR441_15030 PF00085 Thioredoxin JR441_15040 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ JR441_15045 PF05343 M42 glutamyl aminopeptidase JR441_15050 PF03413 Peptidase propeptide and YPEB domain JR441_15055 PF03949 Malic enzyme, NAD binding domain JR441_15055 PF00390 Malic enzyme, N-terminal domain JR441_15060 PF00753 Metallo-beta-lactamase superfamily JR441_15065 PF02390 Putative methyltransferase JR441_15070 PF14165 YtzH-like protein JR441_15075 PF01636 Phosphotransferase enzyme family JR441_15080 PF17999 Pullulanase N1-terminal domain JR441_15080 PF00128 Alpha amylase, catalytic domain JR441_15080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JR441_15085 PF00781 Diacylglycerol kinase catalytic domain JR441_15100 PF00291 Pyridoxal-phosphate dependent enzyme JR441_15105 PF01546 Peptidase family M20/M25/M40 JR441_15110 PF00860 Permease family JR441_15115 PF05975 Bacterial ABC transporter protein EcsB JR441_15120 PF00005 ABC transporter JR441_15125 PF08220 DeoR-like helix-turn-helix domain JR441_15130 PF00849 RNA pseudouridylate synthase JR441_15130 PF01479 S4 domain JR441_15135 PF01943 Polysaccharide biosynthesis protein JR441_15135 PF14667 Polysaccharide biosynthesis C-terminal domain JR441_15145 PF02028 BCCT, betaine/carnitine/choline family transporter JR441_15150 PF10957 Sporulation protein Cse60 JR441_15155 PF04854 Protein of unknown function, DUF624 JR441_15160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR441_15160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR441_15170 PF07470 Glycosyl Hydrolase Family 88 JR441_15175 PF00528 Binding-protein-dependent transport system inner membrane component JR441_15180 PF12833 Helix-turn-helix domain JR441_15180 PF17853 GGDEF-like domain JR441_15185 PF13416 Bacterial extracellular solute-binding protein JR441_15190 PF00528 Binding-protein-dependent transport system inner membrane component JR441_15195 PF01370 NAD dependent epimerase/dehydratase family JR441_15200 PF00067 Cytochrome P450 JR441_15205 PF06968 Biotin and Thiamin Synthesis associated domain JR441_15205 PF04055 Radical SAM superfamily JR441_15215 PF00155 Aminotransferase class I and II JR441_15220 PF00202 Aminotransferase class-III JR441_15225 PF03744 6-carboxyhexanoate--CoA ligase JR441_15230 PF01738 Dienelactone hydrolase family JR441_15235 PF00356 Bacterial regulatory proteins, lacI family JR441_15240 PF01547 Bacterial extracellular solute-binding protein JR441_15245 PF00528 Binding-protein-dependent transport system inner membrane component JR441_15250 PF00528 Binding-protein-dependent transport system inner membrane component JR441_15255 PF11975 Family 4 glycosyl hydrolase C-terminal domain JR441_15255 PF02056 Family 4 glycosyl hydrolase JR441_15260 PF00581 Rhodanese-like domain JR441_15265 PF13603 Leucyl-tRNA synthetase, Domain 2 JR441_15265 PF00133 tRNA synthetases class I (I, L, M and V) JR441_15265 PF08264 Anticodon-binding domain of tRNA JR441_15265 PF09334 tRNA synthetases class I (M) JR441_15270 PF14074 Protein of unknown function (DUF4257) JR441_15275 PF13426 PAS domain JR441_15275 PF01740 STAS domain JR441_15280 PF07690 Major Facilitator Superfamily JR441_15285 PF04791 LMBR1-like membrane protein JR441_15290 PF02687 FtsX-like permease family JR441_15295 PF00005 ABC transporter JR441_15300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_15305 PF00486 Transcriptional regulatory protein, C terminal JR441_15305 PF00072 Response regulator receiver domain JR441_15310 PF12704 MacB-like periplasmic core domain JR441_15310 PF02687 FtsX-like permease family JR441_15315 PF00005 ABC transporter JR441_15330 PF00005 ABC transporter JR441_15335 PF00392 Bacterial regulatory proteins, gntR family JR441_15345 PF10732 Protein of unknown function (DUF2524) JR441_15350 PF04055 Radical SAM superfamily JR441_15350 PF16199 Radical_SAM C-terminal domain JR441_15355 PF06962 Putative rRNA methylase JR441_15360 PF10776 Protein of unknown function (DUF2600) JR441_15365 PF12146 Serine aminopeptidase, S33 JR441_15370 PF00132 Bacterial transferase hexapeptide (six repeats) JR441_15375 PF00324 Amino acid permease JR441_15380 PF13537 Glutamine amidotransferase domain JR441_15380 PF00733 Asparagine synthase JR441_15385 PF02773 S-adenosylmethionine synthetase, C-terminal domain JR441_15385 PF00438 S-adenosylmethionine synthetase, N-terminal domain JR441_15385 PF02772 S-adenosylmethionine synthetase, central domain JR441_15390 PF01293 Phosphoenolpyruvate carboxykinase JR441_15395 PF10763 Protein of unknown function (DUF2584) JR441_15400 PF00326 Prolyl oligopeptidase family JR441_15410 PF00005 ABC transporter JR441_15415 PF00528 Binding-protein-dependent transport system inner membrane component JR441_15420 PF00293 NUDIX domain JR441_15425 PF05105 Bacteriophage holin family JR441_15430 PF00210 Ferritin-like domain JR441_15440 PF13115 YtkA-like JR441_15445 PF02664 S-Ribosylhomocysteinase (LuxS) JR441_15450 PF01809 Putative membrane protein insertion efficiency factor JR441_15455 PF00484 Carbonic anhydrase JR441_15460 PF01197 Ribosomal protein L31 JR441_15465 PF01654 Cytochrome bd terminal oxidase subunit I JR441_15470 PF02322 Cytochrome bd terminal oxidase subunit II JR441_15475 PF07561 Domain of Unknown Function (DUF1540) JR441_15480 PF00950 ABC 3 transport family JR441_15485 PF00950 ABC 3 transport family JR441_15490 PF00005 ABC transporter JR441_15495 PF01297 Zinc-uptake complex component A periplasmic JR441_15500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JR441_15500 PF13378 Enolase C-terminal domain-like JR441_15505 PF00501 AMP-binding enzyme JR441_15505 PF13193 AMP-binding enzyme C-terminal domain JR441_15510 PF00378 Enoyl-CoA hydratase/isomerase JR441_15515 PF00561 alpha/beta hydrolase fold JR441_15520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR441_15520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR441_15520 PF16582 Middle domain of thiamine pyrophosphate JR441_15525 PF00425 chorismate binding enzyme JR441_15530 PF01258 Prokaryotic dksA/traR C4-type zinc finger JR441_15535 PF00483 Nucleotidyl transferase JR441_15540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JR441_15540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JR441_15540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JR441_15545 PF01370 NAD dependent epimerase/dehydratase family JR441_15550 PF00534 Glycosyl transferases group 1 JR441_15550 PF13439 Glycosyltransferase Family 4 JR441_15565 PF13439 Glycosyltransferase Family 4 JR441_15565 PF00534 Glycosyl transferases group 1 JR441_15570 PF01636 Phosphotransferase enzyme family JR441_15575 PF03073 TspO/MBR family JR441_15580 PF00343 Carbohydrate phosphorylase JR441_15585 PF08323 Starch synthase catalytic domain JR441_15585 PF00534 Glycosyl transferases group 1 JR441_15590 PF00483 Nucleotidyl transferase JR441_15595 PF00483 Nucleotidyl transferase JR441_15600 PF00128 Alpha amylase, catalytic domain JR441_15600 PF02806 Alpha amylase, C-terminal all-beta domain JR441_15600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JR441_15725 PF09515 Thiamine transporter protein (Thia_YuaJ) JR441_15730 PF00583 Acetyltransferase (GNAT) family JR441_15735 PF01145 SPFH domain / Band 7 family JR441_15735 PF15975 Flotillin JR441_15745 PF12867 DinB superfamily JR441_15755 PF00465 Iron-containing alcohol dehydrogenase JR441_15760 PF00171 Aldehyde dehydrogenase family JR441_15770 PF17735 Biofilm surface layer A JR441_15775 PF02080 TrkA-C domain JR441_15775 PF02254 TrkA-N domain JR441_15780 PF02386 Cation transport protein JR441_15785 PF05360 yiaA/B two helix domain JR441_15790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JR441_15790 PF13457 GW (Gly-Tryp) dipeptide domain JR441_15795 PF07690 Major Facilitator Superfamily JR441_15800 PF05995 Cysteine dioxygenase type I JR441_15810 PF02673 Bacitracin resistance protein BacA JR441_15815 PF01594 AI-2E family transporter JR441_15820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR441_15820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR441_15825 PF06134 L-rhamnose isomerase (RhaA) JR441_15830 PF05336 L-rhamnose mutarotase JR441_15835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR441_15835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR441_15840 PF00455 DeoR C terminal sensor domain JR441_15840 PF08220 DeoR-like helix-turn-helix domain JR441_15845 PF00596 Class II Aldolase and Adducin N-terminal domain JR441_15850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_15850 PF00672 HAMP domain JR441_15850 PF02743 Cache domain JR441_15855 PF02743 Cache domain JR441_15855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_15855 PF00672 HAMP domain JR441_15860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_15860 PF00672 HAMP domain JR441_15860 PF02743 Cache domain JR441_15865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_15865 PF00672 HAMP domain JR441_15865 PF02743 Cache domain JR441_15880 PF01894 Uncharacterised protein family UPF0047 JR441_15890 PF16657 Maltogenic Amylase, C-terminal domain JR441_15890 PF00128 Alpha amylase, catalytic domain JR441_15895 PF00571 CBS domain JR441_15895 PF01595 Cyclin M transmembrane N-terminal domain JR441_15895 PF03471 Transporter associated domain JR441_15900 PF04298 Putative neutral zinc metallopeptidase JR441_15910 PF11458 Membrane-integrating protein Mistic JR441_15915 PF07885 Ion channel JR441_15915 PF02254 TrkA-N domain JR441_15920 PF08868 YugN-like family JR441_15930 PF00342 Phosphoglucose isomerase JR441_15935 PF00465 Iron-containing alcohol dehydrogenase JR441_15940 PF00465 Iron-containing alcohol dehydrogenase JR441_15945 PF04070 Domain of unknown function (DUF378) JR441_15950 PF00575 S1 RNA binding domain JR441_15955 PF00155 Aminotransferase class I and II JR441_15960 PF01037 Lrp/AsnC ligand binding domain JR441_15965 PF00561 alpha/beta hydrolase fold JR441_15965 PF08386 TAP-like protein JR441_15970 PF08958 Domain of unknown function (DUF1871) JR441_15975 PF00155 Aminotransferase class I and II JR441_15980 PF00512 His Kinase A (phospho-acceptor) domain JR441_15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_15985 PF08810 Kinase associated protein B JR441_15990 PF00929 Exonuclease JR441_15995 PF07690 Major Facilitator Superfamily JR441_16000 PF00912 Transglycosylase JR441_16000 PF00905 Penicillin binding protein transpeptidase domain JR441_16005 PF04134 Protein of unknown function, DUF393 JR441_16010 PF17328 Family of unknown function (DUF5366) JR441_16015 PF00989 PAS fold JR441_16015 PF17203 Single cache domain 3 JR441_16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_16015 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JR441_16020 PF00072 Response regulator receiver domain JR441_16025 PF02608 ABC transporter substrate-binding protein PnrA-like JR441_16030 PF00005 ABC transporter JR441_16035 PF02653 Branched-chain amino acid transport system / permease component JR441_16040 PF02653 Branched-chain amino acid transport system / permease component JR441_16045 PF03390 2-hydroxycarboxylate transporter family JR441_16055 PF13244 Domain of unknown function (DUF4040) JR441_16055 PF00361 Proton-conducting membrane transporter JR441_16055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JR441_16060 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JR441_16065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JR441_16070 PF00361 Proton-conducting membrane transporter JR441_16075 PF01899 Na+/H+ ion antiporter subunit JR441_16080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JR441_16085 PF03334 Na+/H+ antiporter subunit JR441_16090 PF03061 Thioesterase superfamily JR441_16095 PF00196 Bacterial regulatory proteins, luxR family JR441_16095 PF00072 Response regulator receiver domain JR441_16110 PF00348 Polyprenyl synthetase JR441_16115 PF08181 DegQ (SacQ) family JR441_16130 PF00563 EAL domain JR441_16130 PF08668 HDOD domain JR441_16135 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JR441_16135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JR441_16135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JR441_16140 PF00857 Isochorismatase family JR441_16145 PF07997 Protein of unknown function (DUF1694) JR441_16150 PF14166 YueH-like protein JR441_16155 PF10676 Spore germination protein gerPA/gerPF JR441_16160 PF01594 AI-2E family transporter JR441_16165 PF10049 Protein of unknown function (DUF2283) JR441_16170 PF10842 Protein of unknown function (DUF2642) JR441_16175 PF01966 HD domain JR441_16180 PF00106 short chain dehydrogenase JR441_16185 PF17355 Family of unknown function (DUF5383) JR441_16195 PF12538 DNA transporter JR441_16195 PF01580 FtsK/SpoIIIE family JR441_16200 PF10140 WXG100 protein secretion system (Wss), protein YukC JR441_16205 PF08817 WXG100 protein secretion system (Wss), protein YukD JR441_16210 PF06013 Proteins of 100 residues with WXG JR441_16215 PF06018 CodY GAF-like domain JR441_16215 PF17853 GGDEF-like domain JR441_16215 PF13556 PucR C-terminal helix-turn-helix domain JR441_16220 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JR441_16220 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JR441_16225 PF10042 Uncharacterized conserved protein (DUF2278) JR441_16230 PF03621 MbtH-like protein JR441_16235 PF13193 AMP-binding enzyme C-terminal domain JR441_16235 PF00501 AMP-binding enzyme JR441_16235 PF00550 Phosphopantetheine attachment site JR441_16235 PF00975 Thioesterase domain JR441_16235 PF00668 Condensation domain JR441_16240 PF00550 Phosphopantetheine attachment site JR441_16240 PF00857 Isochorismatase family JR441_16245 PF13193 AMP-binding enzyme C-terminal domain JR441_16245 PF00501 AMP-binding enzyme JR441_16250 PF00425 chorismate binding enzyme JR441_16255 PF00106 short chain dehydrogenase JR441_16260 PF00756 Putative esterase JR441_16265 PF00174 Oxidoreductase molybdopterin binding domain JR441_16270 PF02632 BioY family JR441_16275 PF13726 Na+-H+ antiporter family JR441_16275 PF03553 Na+/H+ antiporter family JR441_16280 PF02789 Cytosol aminopeptidase family, N-terminal domain JR441_16280 PF00883 Cytosol aminopeptidase family, catalytic domain JR441_16285 PF02681 Divergent PAP2 family JR441_16290 PF06725 3D domain JR441_16295 PF14068 Putative membrane protein JR441_16300 PF17302 Family of unknown function (DUF5351) JR441_16305 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_16310 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_16320 PF00478 IMP dehydrogenase / GMP reductase domain JR441_16325 PF04299 Putative FMN-binding domain JR441_16330 PF00583 Acetyltransferase (GNAT) family JR441_16335 PF01521 Iron-sulphur cluster biosynthesis JR441_16340 PF01678 Diaminopimelate epimerase JR441_16345 PF01773 Na+ dependent nucleoside transporter N-terminus JR441_16345 PF07662 Na+ dependent nucleoside transporter C-terminus JR441_16350 PF07293 Protein of unknown function (DUF1450) JR441_16355 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_16360 PF07315 Protein of unknown function (DUF1462) JR441_16365 PF01106 NifU-like domain JR441_16370 PF07676 WD40-like Beta Propeller Repeat JR441_16370 PF00326 Prolyl oligopeptidase family JR441_16375 PF08544 GHMP kinases C terminal JR441_16375 PF00288 GHMP kinases N terminal domain JR441_16380 PF00291 Pyridoxal-phosphate dependent enzyme JR441_16385 PF03447 Homoserine dehydrogenase, NAD binding domain JR441_16385 PF00742 Homoserine dehydrogenase JR441_16385 PF01842 ACT domain JR441_16395 PF04608 Phosphatidylglycerophosphatase A JR441_16400 PF13344 Haloacid dehalogenase-like hydrolase JR441_16405 PF01934 Protein of unknown function DUF86 JR441_16410 PF06265 Protein of unknown function (DUF1027) JR441_16415 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JR441_16420 PF04055 Radical SAM superfamily JR441_16420 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JR441_16425 PF01551 Peptidase family M23 JR441_16430 PF09560 Sporulation protein YunB (Spo_YunB) JR441_16435 PF08827 Domain of unknown function (DUF1805) JR441_16440 PF02872 5'-nucleotidase, C-terminal domain JR441_16445 PF01925 Sulfite exporter TauE/SafE JR441_16450 PF01904 Protein of unknown function DUF72 JR441_16460 PF01979 Amidohydrolase family JR441_16465 PF17853 GGDEF-like domain JR441_16465 PF13556 PucR C-terminal helix-turn-helix domain JR441_16465 PF07905 Purine catabolism regulatory protein-like family JR441_16470 PF00860 Permease family JR441_16475 PF00860 Permease family JR441_16480 PF09349 OHCU decarboxylase JR441_16480 PF01014 Uricase JR441_16485 PF00576 HIUase/Transthyretin family JR441_16490 PF09680 Family of unknown function JR441_16495 PF00111 2Fe-2S iron-sulfur cluster binding domain JR441_16495 PF01799 [2Fe-2S] binding domain JR441_16500 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JR441_16500 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JR441_16505 PF00941 FAD binding domain in molybdopterin dehydrogenase JR441_16510 PF12804 MobA-like NTP transferase domain JR441_16515 PF13478 XdhC Rossmann domain JR441_16515 PF02625 XdhC and CoxI family JR441_16520 PF00266 Aminotransferase class-V JR441_16525 PF01546 Peptidase family M20/M25/M40 JR441_16535 PF04231 Endonuclease I JR441_16540 PF00005 ABC transporter JR441_16540 PF17912 MalK OB fold domain JR441_16540 PF03459 TOBE domain JR441_16545 PF00392 Bacterial regulatory proteins, gntR family JR441_16545 PF07702 UTRA domain JR441_16550 PF00294 pfkB family carbohydrate kinase JR441_16555 PF00528 Binding-protein-dependent transport system inner membrane component JR441_16560 PF00528 Binding-protein-dependent transport system inner membrane component JR441_16565 PF01547 Bacterial extracellular solute-binding protein JR441_16570 PF01380 SIS domain JR441_16575 PF01541 GIY-YIG catalytic domain JR441_16580 PF01266 FAD dependent oxidoreductase JR441_16595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_16605 PF01458 Uncharacterized protein family (UPF0051) JR441_16610 PF01592 NifU-like N terminal domain JR441_16615 PF00266 Aminotransferase class-V JR441_16620 PF01458 Uncharacterized protein family (UPF0051) JR441_16625 PF00005 ABC transporter JR441_16635 PF02627 Carboxymuconolactone decarboxylase family JR441_16640 PF03180 NLPA lipoprotein JR441_16645 PF00528 Binding-protein-dependent transport system inner membrane component JR441_16650 PF00005 ABC transporter JR441_16650 PF09383 NIL domain JR441_16655 PF02036 SCP-2 sterol transfer family JR441_16660 PF00085 Thioredoxin JR441_16665 PF01751 Toprim domain JR441_16670 PF10830 Protein of unknown function (DUF2553) JR441_16675 PF01597 Glycine cleavage H-protein JR441_16680 PF03960 ArsC family JR441_16685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR441_16685 PF02770 Acyl-CoA dehydrogenase, middle domain JR441_16685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR441_16690 PF00108 Thiolase, N-terminal domain JR441_16690 PF02803 Thiolase, C-terminal domain JR441_16695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JR441_16695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JR441_16695 PF00378 Enoyl-CoA hydratase/isomerase JR441_16700 PF14115 YuzL-like protein JR441_16705 PF01619 Proline dehydrogenase JR441_16715 PF07875 Coat F domain JR441_16720 PF01047 MarR family JR441_16725 PF07690 Major Facilitator Superfamily JR441_16730 PF14552 Tautomerase enzyme JR441_16740 PF03466 LysR substrate binding domain JR441_16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_16745 PF10835 Protein of unknown function (DUF2573) JR441_16750 PF00005 ABC transporter JR441_16755 PF14039 YusW-like protein JR441_16765 PF00106 short chain dehydrogenase JR441_16770 PF00210 Ferritin-like domain JR441_16775 PF13180 PDZ domain JR441_16780 PF00072 Response regulator receiver domain JR441_16780 PF00486 Transcriptional regulatory protein, C terminal JR441_16785 PF00672 HAMP domain JR441_16785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_16785 PF00512 His Kinase A (phospho-acceptor) domain JR441_16795 PF00440 Bacterial regulatory proteins, tetR family JR441_16800 PF00206 Lyase JR441_16800 PF10415 Fumarase C C-terminus JR441_16805 PF13113 Protein of unknown function (DUF3970) JR441_16810 PF03323 Bacillus/Clostridium GerA spore germination protein JR441_16815 PF03845 Spore germination protein JR441_16820 PF05504 Spore germination B3/ GerAC like, C-terminal JR441_16825 PF00196 Bacterial regulatory proteins, luxR family JR441_16825 PF00072 Response regulator receiver domain JR441_16830 PF00672 HAMP domain JR441_16830 PF07730 Histidine kinase JR441_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_16835 PF09922 Cell wall-active antibiotics response 4TMS YvqF JR441_16840 PF13349 Putative adhesin JR441_16845 PF04012 PspA/IM30 family JR441_16855 PF07690 Major Facilitator Superfamily JR441_16860 PF01923 Cobalamin adenosyltransferase JR441_16865 PF00005 ABC transporter JR441_16870 PF01032 FecCD transport family JR441_16875 PF01497 Periplasmic binding protein JR441_16880 PF00106 short chain dehydrogenase JR441_16885 PF08450 SMP-30/Gluconolactonase/LRE-like region JR441_16890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_16890 PF00512 His Kinase A (phospho-acceptor) domain JR441_16895 PF00486 Transcriptional regulatory protein, C terminal JR441_16895 PF00072 Response regulator receiver domain JR441_16905 PF04545 Sigma-70, region 4 JR441_16910 PF12841 YvrJ protein family JR441_16915 PF00190 Cupin JR441_16920 PF14184 Regulatory protein YrvL JR441_16925 PF02687 FtsX-like permease family JR441_16925 PF12704 MacB-like periplasmic core domain JR441_16930 PF00005 ABC transporter JR441_16935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JR441_16940 PF00005 ABC transporter JR441_16945 PF01032 FecCD transport family JR441_16950 PF01032 FecCD transport family JR441_16955 PF01497 Periplasmic binding protein JR441_16960 PF13520 Amino acid permease JR441_16965 PF09575 Small spore protein J (Spore_SspJ) JR441_16970 PF04307 LexA-binding, inner membrane-associated putative hydrolase JR441_16975 PF00884 Sulfatase JR441_16980 PF12727 PBP superfamily domain JR441_16980 PF12728 Helix-turn-helix domain JR441_16990 PF00528 Binding-protein-dependent transport system inner membrane component JR441_16995 PF00248 Aldo/keto reductase family JR441_17005 PF00999 Sodium/hydrogen exchanger family JR441_17010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JR441_17010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JR441_17015 PF00175 Oxidoreductase NAD-binding domain JR441_17015 PF00258 Flavodoxin JR441_17015 PF00667 FAD binding domain JR441_17020 PF13538 UvrD-like helicase C-terminal domain JR441_17030 PF03458 UPF0126 domain JR441_17035 PF02600 Disulfide bond formation protein DsbB JR441_17040 PF13462 Thioredoxin JR441_17045 PF00403 Heavy-metal-associated domain JR441_17050 PF00403 Heavy-metal-associated domain JR441_17055 PF00403 Heavy-metal-associated domain JR441_17060 PF02583 Metal-sensitive transcriptional repressor JR441_17065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR441_17065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR441_17070 PF02525 Flavodoxin-like fold JR441_17080 PF17314 Family of unknown function (DUF5360) JR441_17085 PF00893 Small Multidrug Resistance protein JR441_17090 PF00440 Bacterial regulatory proteins, tetR family JR441_17095 PF00106 short chain dehydrogenase JR441_17105 PF01668 SmpB protein JR441_17110 PF00575 S1 RNA binding domain JR441_17110 PF00773 RNB domain JR441_17110 PF08206 Ribonuclease B OB domain JR441_17110 PF17876 Cold shock domain JR441_17115 PF12146 Serine aminopeptidase, S33 JR441_17120 PF03840 Preprotein translocase SecG subunit JR441_17125 PF00561 alpha/beta hydrolase fold JR441_17130 PF01381 Helix-turn-helix JR441_17145 PF01638 HxlR-like helix-turn-helix JR441_17150 PF12729 Four helix bundle sensory module for signal transduction JR441_17150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JR441_17150 PF00672 HAMP domain JR441_17155 PF00528 Binding-protein-dependent transport system inner membrane component JR441_17160 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JR441_17165 PF00528 Binding-protein-dependent transport system inner membrane component JR441_17170 PF00005 ABC transporter JR441_17170 PF00571 CBS domain JR441_17175 PF12802 MarR family JR441_17180 PF00528 Binding-protein-dependent transport system inner membrane component JR441_17185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JR441_17190 PF00528 Binding-protein-dependent transport system inner membrane component JR441_17195 PF00005 ABC transporter JR441_17195 PF00571 CBS domain JR441_17200 PF12802 MarR family JR441_17205 PF01914 MarC family integral membrane protein JR441_17210 PF11724 YvbH-like oligomerisation region JR441_17210 PF08000 Bacterial PH domain JR441_17220 PF13240 zinc-ribbon domain JR441_17225 PF00583 Acetyltransferase (GNAT) family JR441_17240 PF02585 GlcNAc-PI de-N-acetylase JR441_17245 PF08889 WbqC-like protein family JR441_17255 PF00155 Aminotransferase class I and II JR441_17260 PF01370 NAD dependent epimerase/dehydratase family JR441_17265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JR441_17270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JR441_17270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JR441_17270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JR441_17275 PF02225 PA domain JR441_17275 PF04389 Peptidase family M28 JR441_17280 PF00113 Enolase, C-terminal TIM barrel domain JR441_17280 PF03952 Enolase, N-terminal domain JR441_17285 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JR441_17285 PF01676 Metalloenzyme superfamily JR441_17290 PF00121 Triosephosphate isomerase JR441_17295 PF00162 Phosphoglycerate kinase JR441_17300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JR441_17300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JR441_17305 PF04198 Putative sugar-binding domain JR441_17310 PF00083 Sugar (and other) transporter JR441_17315 PF00392 Bacterial regulatory proteins, gntR family JR441_17320 PF00296 Luciferase-like monooxygenase JR441_17325 PF03466 LysR substrate binding domain JR441_17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_17330 PF00892 EamA-like transporter family JR441_17335 PF00324 Amino acid permease JR441_17340 PF00704 Glycosyl hydrolases family 18 JR441_17345 PF02589 LUD domain JR441_17350 PF11870 Domain of unknown function (DUF3390) JR441_17350 PF13183 4Fe-4S dicluster domain JR441_17350 PF02589 LUD domain JR441_17355 PF02754 Cysteine-rich domain JR441_17360 PF00196 Bacterial regulatory proteins, luxR family JR441_17360 PF00072 Response regulator receiver domain JR441_17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_17365 PF07730 Histidine kinase JR441_17375 PF00005 ABC transporter JR441_17380 PF12697 Alpha/beta hydrolase family JR441_17385 PF07228 Stage II sporulation protein E (SpoIIE) JR441_17385 PF13426 PAS domain JR441_17390 PF07745 Glycosyl hydrolase family 53 JR441_17395 PF02449 Beta-galactosidase JR441_17395 PF08533 Beta-galactosidase C-terminal domain JR441_17395 PF08532 Beta-galactosidase trimerisation domain JR441_17400 PF00528 Binding-protein-dependent transport system inner membrane component JR441_17410 PF13416 Bacterial extracellular solute-binding protein JR441_17415 PF00356 Bacterial regulatory proteins, lacI family JR441_17420 PF00392 Bacterial regulatory proteins, gntR family JR441_17420 PF07729 FCD domain JR441_17425 PF02652 L-lactate permease JR441_17430 PF00309 Sigma-54 factor, Activator interacting domain (AID) JR441_17430 PF04963 Sigma-54 factor, core binding domain JR441_17430 PF04552 Sigma-54, DNA binding domain JR441_17435 PF09628 YvfG protein JR441_17440 PF04230 Polysaccharide pyruvyl transferase JR441_17445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JR441_17450 PF00132 Bacterial transferase hexapeptide (six repeats) JR441_17450 PF17836 PglD N-terminal domain JR441_17455 PF02397 Bacterial sugar transferase JR441_17460 PF01943 Polysaccharide biosynthesis protein JR441_17460 PF14667 Polysaccharide biosynthesis C-terminal domain JR441_17465 PF00535 Glycosyl transferase family 2 JR441_17470 PF04230 Polysaccharide pyruvyl transferase JR441_17475 PF00535 Glycosyl transferase family 2 JR441_17485 PF13439 Glycosyltransferase Family 4 JR441_17485 PF00534 Glycosyl transferases group 1 JR441_17490 PF00535 Glycosyl transferase family 2 JR441_17495 PF00534 Glycosyl transferases group 1 JR441_17495 PF13439 Glycosyltransferase Family 4 JR441_17500 PF02719 Polysaccharide biosynthesis protein JR441_17505 PF13614 AAA domain JR441_17510 PF02706 Chain length determinant protein JR441_17515 PF01381 Helix-turn-helix JR441_17515 PF08671 Anti-repressor SinI JR441_17520 PF00135 Carboxylesterase family JR441_17530 PF05870 Phenolic acid decarboxylase (PAD) JR441_17540 PF01177 Asp/Glu/Hydantoin racemase JR441_17550 PF02435 Levansucrase/Invertase JR441_17555 PF08244 Glycosyl hydrolases family 32 C terminal JR441_17555 PF00251 Glycosyl hydrolases family 32 N-terminal domain JR441_17560 PF13520 Amino acid permease JR441_17565 PF00440 Bacterial regulatory proteins, tetR family JR441_17565 PF17934 Tetracyclin repressor-like, C-terminal domain JR441_17570 PF00893 Small Multidrug Resistance protein JR441_17575 PF00893 Small Multidrug Resistance protein JR441_17580 PF11553 Protein of unknown function (DUF3231) JR441_17585 PF08031 Berberine and berberine like JR441_17585 PF01565 FAD binding domain JR441_17590 PF01734 Patatin-like phospholipase JR441_17630 PF00574 Clp protease JR441_17635 PF13419 Haloacid dehalogenase-like hydrolase JR441_17640 PF00128 Alpha amylase, catalytic domain JR441_17640 PF16657 Maltogenic Amylase, C-terminal domain JR441_17645 PF03633 Glycosyl hydrolase family 65, C-terminal domain JR441_17645 PF03632 Glycosyl hydrolase family 65 central catalytic domain JR441_17645 PF03636 Glycosyl hydrolase family 65, N-terminal domain JR441_17650 PF06691 Protein of unknown function (DUF1189) JR441_17655 PF00528 Binding-protein-dependent transport system inner membrane component JR441_17660 PF00528 Binding-protein-dependent transport system inner membrane component JR441_17665 PF13416 Bacterial extracellular solute-binding protein JR441_17670 PF02903 Alpha amylase, N-terminal ig-like domain JR441_17670 PF00128 Alpha amylase, catalytic domain JR441_17675 PF00356 Bacterial regulatory proteins, lacI family JR441_17680 PF03641 Possible lysine decarboxylase JR441_17685 PF03819 MazG nucleotide pyrophosphohydrolase domain JR441_17690 PF00916 Sulfate permease family JR441_17690 PF01740 STAS domain JR441_17695 PF00484 Carbonic anhydrase JR441_17700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JR441_17700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JR441_17705 PF02687 FtsX-like permease family JR441_17710 PF00005 ABC transporter JR441_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_17720 PF00072 Response regulator receiver domain JR441_17720 PF00486 Transcriptional regulatory protein, C terminal JR441_17730 PF00797 N-acetyltransferase JR441_17735 PF00381 PTS HPr component phosphorylation site JR441_17740 PF10298 WhiA N-terminal LAGLIDADG-like domain JR441_17740 PF14527 WhiA LAGLIDADG-like domain JR441_17740 PF02650 WhiA C-terminal HTH domain JR441_17745 PF01933 Uncharacterised protein family UPF0052 JR441_17750 PF03668 P-loop ATPase protein family JR441_17755 PF00293 NUDIX domain JR441_17760 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_17765 PF00877 NlpC/P60 family JR441_17775 PF00664 ABC transporter transmembrane region JR441_17775 PF00005 ABC transporter JR441_17795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JR441_17795 PF01502 Phosphoribosyl-AMP cyclohydrolase JR441_17800 PF00977 Histidine biosynthesis protein JR441_17805 PF00977 Histidine biosynthesis protein JR441_17810 PF00117 Glutamine amidotransferase class-I JR441_17815 PF00475 Imidazoleglycerol-phosphate dehydratase JR441_17820 PF00815 Histidinol dehydrogenase JR441_17825 PF01634 ATP phosphoribosyltransferase JR441_17830 PF13393 Histidyl-tRNA synthetase JR441_17835 PF13529 Peptidase_C39 like family JR441_17840 PF03211 Pectate lyase JR441_17845 PF14602 Hexapeptide repeat of succinyl-transferase JR441_17850 PF13419 Haloacid dehalogenase-like hydrolase JR441_17855 PF07670 Nucleoside recognition JR441_17860 PF01790 Prolipoprotein diacylglyceryl transferase JR441_17865 PF07475 HPr Serine kinase C-terminal domain JR441_17865 PF02603 HPr Serine kinase N terminus JR441_17870 PF01979 Amidohydrolase family JR441_17875 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JR441_17880 PF07702 UTRA domain JR441_17880 PF00392 Bacterial regulatory proteins, gntR family JR441_17885 PF00149 Calcineurin-like phosphoesterase JR441_17890 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JR441_17895 PF04024 PspC domain JR441_17900 PF13349 Putative adhesin JR441_17915 PF00669 Bacterial flagellin N-terminal helical region JR441_17915 PF00700 Bacterial flagellin C-terminal helical region JR441_17920 PF17760 UvrA interaction domain JR441_17920 PF17755 UvrA DNA-binding domain JR441_17920 PF00005 ABC transporter JR441_17925 PF02151 UvrB/uvrC motif JR441_17925 PF12344 Ultra-violet resistance protein B JR441_17925 PF17757 UvrB interaction domain JR441_17925 PF04851 Type III restriction enzyme, res subunit JR441_17925 PF00271 Helicase conserved C-terminal domain JR441_17930 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) JR441_17935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JR441_17935 PF00391 PEP-utilising enzyme, mobile domain JR441_17940 PF00440 Bacterial regulatory proteins, tetR family JR441_17945 PF07690 Major Facilitator Superfamily JR441_17950 PF17820 PDZ domain JR441_17955 PF17423 Swarming motility protein JR441_17960 PF01471 Putative peptidoglycan binding domain JR441_17960 PF17820 PDZ domain JR441_17960 PF03572 Peptidase family S41 JR441_17965 PF02687 FtsX-like permease family JR441_17965 PF18075 FtsX extracellular domain JR441_17970 PF00005 ABC transporter JR441_17975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JR441_17980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JR441_17980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JR441_17990 PF07517 SecA DEAD-like domain JR441_17990 PF01043 SecA preprotein cross-linking domain JR441_17990 PF07516 SecA Wing and Scaffold domain JR441_17990 PF02810 SEC-C motif JR441_17995 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JR441_17995 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JR441_18010 PF02561 Flagellar protein FliS JR441_18015 PF02465 Flagellar hook-associated protein 2 N-terminus JR441_18015 PF07196 Flagellin hook IN motif JR441_18015 PF07195 Flagellar hook-associated protein 2 C-terminus JR441_18020 PF03646 FlaG protein JR441_18025 PF00700 Bacterial flagellin C-terminal helical region JR441_18025 PF00669 Bacterial flagellin N-terminal helical region JR441_18030 PF02599 Global regulator protein family JR441_18035 PF02623 FliW protein JR441_18045 PF00700 Bacterial flagellin C-terminal helical region JR441_18045 PF00669 Bacterial flagellin N-terminal helical region JR441_18050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR441_18050 PF00460 Flagella basal body rod protein JR441_18055 PF05130 FlgN protein JR441_18060 PF04316 Anti-sigma-28 factor, FlgM JR441_18075 PF10719 Late competence development protein ComFB JR441_18080 PF00271 Helicase conserved C-terminal domain JR441_18080 PF04851 Type III restriction enzyme, res subunit JR441_18085 PF02645 Uncharacterised protein, DegV family COG1307 JR441_18090 PF00196 Bacterial regulatory proteins, luxR family JR441_18090 PF00072 Response regulator receiver domain JR441_18095 PF07730 Histidine kinase JR441_18095 PF05384 Sensor protein DegS JR441_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_18100 PF01205 Uncharacterized protein family UPF0029 JR441_18100 PF09186 Domain of unknown function (DUF1949) JR441_18105 PF03816 Cell envelope-related transcriptional attenuator domain JR441_18110 PF00953 Glycosyl transferase family 4 JR441_18120 PF00535 Glycosyl transferase family 2 JR441_18125 PF02706 Chain length determinant protein JR441_18130 PF04932 O-Antigen ligase JR441_18135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JR441_18135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JR441_18135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JR441_18140 PF13439 Glycosyltransferase Family 4 JR441_18140 PF00534 Glycosyl transferases group 1 JR441_18145 PF01943 Polysaccharide biosynthesis protein JR441_18145 PF14667 Polysaccharide biosynthesis C-terminal domain JR441_18150 PF02397 Bacterial sugar transferase JR441_18155 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JR441_18155 PF00535 Glycosyl transferase family 2 JR441_18160 PF04122 Putative cell wall binding repeat 2 JR441_18160 PF01520 N-acetylmuramoyl-L-alanine amidase JR441_18165 PF04122 Putative cell wall binding repeat 2 JR441_18165 PF08486 Stage II sporulation protein JR441_18175 PF03816 Cell envelope-related transcriptional attenuator domain JR441_18180 PF02350 UDP-N-acetylglucosamine 2-epimerase JR441_18185 PF00535 Glycosyl transferase family 2 JR441_18185 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JR441_18190 PF00534 Glycosyl transferases group 1 JR441_18200 PF00483 Nucleotidyl transferase JR441_18205 PF00005 ABC transporter JR441_18210 PF01061 ABC-2 type transporter JR441_18215 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JR441_18215 PF00535 Glycosyl transferase family 2 JR441_18220 PF00535 Glycosyl transferase family 2 JR441_18225 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JR441_18230 PF01467 Cytidylyltransferase-like JR441_18235 PF03808 Glycosyl transferase WecB/TagA/CpsF family JR441_18240 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JR441_18245 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JR441_18250 PF08240 Alcohol dehydrogenase GroES-like domain JR441_18250 PF16912 Glucose dehydrogenase C-terminus JR441_18255 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JR441_18260 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JR441_18265 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JR441_18265 PF05036 Sporulation related domain JR441_18265 PF08239 Bacterial SH3 domain JR441_18270 PF01238 Phosphomannose isomerase type I JR441_18275 PF03323 Bacillus/Clostridium GerA spore germination protein JR441_18280 PF03845 Spore germination protein JR441_18285 PF05504 Spore germination B3/ GerAC like, C-terminal JR441_18290 PF00083 Sugar (and other) transporter JR441_18295 PF03816 Cell envelope-related transcriptional attenuator domain JR441_18305 PF00877 NlpC/P60 family JR441_18315 PF09587 Bacterial capsule synthesis protein PGA_cap JR441_18320 PF14102 Capsule biosynthesis CapC JR441_18325 PF08245 Mur ligase middle domain JR441_18330 PF00356 Bacterial regulatory proteins, lacI family JR441_18335 PF00294 pfkB family carbohydrate kinase JR441_18340 PF05025 RbsD / FucU transport protein family JR441_18345 PF00005 ABC transporter JR441_18350 PF02653 Branched-chain amino acid transport system / permease component JR441_18355 PF13407 Periplasmic binding protein domain JR441_18360 PF08239 Bacterial SH3 domain JR441_18365 PF13031 Protein of unknown function (DUF3892) JR441_18370 PF02525 Flavodoxin-like fold JR441_18375 PF03306 Alpha-acetolactate decarboxylase JR441_18380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR441_18380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR441_18380 PF00205 Thiamine pyrophosphate enzyme, central domain JR441_18385 PF03466 LysR substrate binding domain JR441_18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_18390 PF02040 Arsenical pump membrane protein JR441_18405 PF08757 CotH kinase protein JR441_18415 PF01613 Flavin reductase like domain JR441_18420 PF13789 Domain of unknown function (DUF4181) JR441_18430 PF13404 AsnC-type helix-turn-helix domain JR441_18430 PF01037 Lrp/AsnC ligand binding domain JR441_18435 PF02417 Chromate transporter JR441_18440 PF02417 Chromate transporter JR441_18450 PF03358 NADPH-dependent FMN reductase JR441_18455 PF03466 LysR substrate binding domain JR441_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_18460 PF04493 Endonuclease V JR441_18475 PF14449 Pre-toxin TG JR441_18475 PF04740 LXG domain of WXG superfamily JR441_18475 PF14431 YwqJ-like deaminase JR441_18485 PF16888 Domain of unknown function (DUF5082) JR441_18490 PF09234 Domain of unknown function (DUF1963) JR441_18495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JR441_18495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JR441_18495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JR441_18505 PF13614 AAA domain JR441_18510 PF13807 G-rich domain on putative tyrosine kinase JR441_18510 PF02706 Chain length determinant protein JR441_18520 PF04434 SWIM zinc finger JR441_18525 PF12419 SNF2 Helicase protein JR441_18525 PF00271 Helicase conserved C-terminal domain JR441_18525 PF00176 SNF2 family N-terminal domain JR441_18535 PF08220 DeoR-like helix-turn-helix domain JR441_18535 PF00455 DeoR C terminal sensor domain JR441_18540 PF00436 Single-strand binding protein family JR441_18550 PF14183 YwpF-like protein JR441_18555 PF04203 Sortase domain JR441_18560 PF06580 Histidine kinase JR441_18560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_18565 PF01741 Large-conductance mechanosensitive channel, MscL JR441_18570 PF07977 FabA-like domain JR441_18575 PF18801 response regulator aspartate phosphatase H, N terminal JR441_18580 PF00460 Flagella basal body rod protein JR441_18580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR441_18585 PF00460 Flagella basal body rod protein JR441_18585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JR441_18595 PF12116 Stage III sporulation protein D JR441_18605 PF01047 MarR family JR441_18610 PF07690 Major Facilitator Superfamily JR441_18615 PF13229 Right handed beta helix region JR441_18620 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JR441_18625 PF07690 Major Facilitator Superfamily JR441_18630 PF00857 Isochorismatase family JR441_18640 PF00909 Ammonium Transporter Family JR441_18645 PF00543 Nitrogen regulatory protein P-II JR441_18650 PF01569 PAP2 superfamily JR441_18655 PF04892 VanZ like family JR441_18660 PF01551 Peptidase family M23 JR441_18665 PF00583 Acetyltransferase (GNAT) family JR441_18670 PF17319 Family of unknown function (DUF5362) JR441_18680 PF17370 Family of unknown function (DUF5392) JR441_18685 PF13396 Phospholipase_D-nuclease N-terminal JR441_18685 PF13091 PLD-like domain JR441_18690 PF13411 MerR HTH family regulatory protein JR441_18690 PF07739 TipAS antibiotic-recognition domain JR441_18695 PF17319 Family of unknown function (DUF5362) JR441_18700 PF13460 NAD(P)H-binding JR441_18705 PF02082 Transcriptional regulator JR441_18710 PF01979 Amidohydrolase family JR441_18710 PF00449 Urease alpha-subunit, N-terminal domain JR441_18715 PF00699 Urease beta subunit JR441_18720 PF00547 Urease, gamma subunit JR441_18735 PF05532 CsbD-like JR441_18745 PF18801 response regulator aspartate phosphatase H, N terminal JR441_18745 PF17874 MalT-like TPR region JR441_18750 PF04055 Radical SAM superfamily JR441_18750 PF06463 Molybdenum Cofactor Synthesis C JR441_18755 PF02634 FdhD/NarQ family JR441_18765 PF00092 von Willebrand factor type A domain JR441_18775 PF00092 von Willebrand factor type A domain JR441_18780 PF08486 Stage II sporulation protein JR441_18785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JR441_18790 PF08680 TATA-box binding JR441_18795 PF06612 Protein of unknown function (DUF1146) JR441_18805 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JR441_18805 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JR441_18810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR441_18810 PF02874 ATP synthase alpha/beta family, beta-barrel domain JR441_18815 PF00231 ATP synthase JR441_18820 PF00306 ATP synthase alpha/beta chain, C terminal domain JR441_18820 PF02874 ATP synthase alpha/beta family, beta-barrel domain JR441_18820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR441_18825 PF00213 ATP synthase delta (OSCP) subunit JR441_18830 PF00430 ATP synthase B/B' CF(0) JR441_18835 PF00137 ATP synthase subunit C JR441_18840 PF00119 ATP synthase A chain JR441_18845 PF03899 ATP synthase I chain JR441_18855 PF00464 Serine hydroxymethyltransferase JR441_18860 PF04260 Protein of unknown function (DUF436) JR441_18865 PF02502 Ribose/Galactose Isomerase JR441_18870 PF01451 Low molecular weight phosphotyrosine protein phosphatase JR441_18875 PF02659 Putative manganese efflux pump JR441_18880 PF01300 Telomere recombination JR441_18880 PF03481 Putative GTP-binding controlling metal-binding JR441_18890 PF09551 Stage II sporulation protein R (spore_II_R) JR441_18895 PF17094 Uncharacterised protein family (UPF0715) JR441_18900 PF17247 Family of unknown function (DUF5316) JR441_18905 PF05175 Methyltransferase small domain JR441_18905 PF17827 PrmC N-terminal domain JR441_18910 PF03462 PCRF domain JR441_18910 PF00472 RF-1 domain JR441_18915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_18920 PF13411 MerR HTH family regulatory protein JR441_18925 PF03547 Membrane transport protein JR441_18930 PF03949 Malic enzyme, NAD binding domain JR441_18930 PF00390 Malic enzyme, N-terminal domain JR441_18935 PF00265 Thymidine kinase JR441_18940 PF01197 Ribosomal protein L31 JR441_18945 PF07498 Rho termination factor, N-terminal domain JR441_18945 PF07497 Rho termination factor, RNA-binding domain JR441_18945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JR441_18955 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JR441_18960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JR441_18965 PF00923 Transaldolase/Fructose-6-phosphate aldolase JR441_18970 PF01116 Fructose-bisphosphate aldolase class-II JR441_18975 PF00072 Response regulator receiver domain JR441_18980 PF10740 Domain of unknown function (DUF2529) JR441_18985 PF06418 CTP synthase N-terminus JR441_18985 PF00117 Glutamine amidotransferase class-I JR441_18990 PF05066 HB1, ASXL, restriction endonuclease HTH domain JR441_18995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JR441_18995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JR441_18995 PF02770 Acyl-CoA dehydrogenase, middle domain JR441_19000 PF02754 Cysteine-rich domain JR441_19000 PF13183 4Fe-4S dicluster domain JR441_19005 PF13091 PLD-like domain JR441_19010 PF03851 UV-endonuclease UvdE JR441_19025 PF00005 ABC transporter JR441_19025 PF00664 ABC transporter transmembrane region JR441_19030 PF13396 Phospholipase_D-nuclease N-terminal JR441_19030 PF13091 PLD-like domain JR441_19035 PF02665 Nitrate reductase gamma subunit JR441_19040 PF02613 Nitrate reductase delta subunit JR441_19045 PF14711 Respiratory nitrate reductase beta C-terminal JR441_19045 PF13247 4Fe-4S dicluster domain JR441_19050 PF14710 Respiratory nitrate reductase alpha N-terminal JR441_19050 PF01568 Molydopterin dinucleotide binding domain JR441_19050 PF00384 Molybdopterin oxidoreductase JR441_19060 PF14256 YwiC-like protein JR441_19065 PF00027 Cyclic nucleotide-binding domain JR441_19065 PF00325 Bacterial regulatory proteins, crp family JR441_19070 PF07690 Major Facilitator Superfamily JR441_19075 PF03485 Arginyl tRNA synthetase N terminal domain JR441_19075 PF05746 DALR anticodon binding domain JR441_19075 PF00750 tRNA synthetases class I (R) JR441_19080 PF09148 Domain of unknown function (DUF1934) JR441_19085 PF11420 Bacteriocin subtilosin A JR441_19095 PF13186 Iron-sulfur cluster-binding domain JR441_19095 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JR441_19095 PF04055 Radical SAM superfamily JR441_19105 PF00005 ABC transporter JR441_19115 PF05193 Peptidase M16 inactive domain JR441_19120 PF00675 Insulinase (Peptidase family M16) JR441_19140 PF18801 response regulator aspartate phosphatase H, N terminal JR441_19145 PF11131 Rap-phr extracellular signalling JR441_19155 PF00491 Arginase family JR441_19160 PF17284 Spermidine synthase tetramerisation domain JR441_19165 PF00905 Penicillin binding protein transpeptidase domain JR441_19165 PF00912 Transglycosylase JR441_19170 PF08741 YwhD family JR441_19175 PF02163 Peptidase family M50 JR441_19180 PF01361 Tautomerase enzyme JR441_19185 PF01047 MarR family JR441_19190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JR441_19190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JR441_19190 PF02824 TGS domain JR441_19190 PF03129 Anticodon binding domain JR441_19195 PF07690 Major Facilitator Superfamily JR441_19200 PF02082 Transcriptional regulator JR441_19210 PF01966 HD domain JR441_19215 PF07293 Protein of unknown function (DUF1450) JR441_19225 PF00892 EamA-like transporter family JR441_19230 PF03099 Biotin/lipoate A/B protein ligase family JR441_19235 PF03466 LysR substrate binding domain JR441_19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_19240 PF01515 Phosphate acetyl/butaryl transferase JR441_19245 PF06778 Chlorite dismutase JR441_19255 PF00155 Aminotransferase class I and II JR441_19260 PF07690 Major Facilitator Superfamily JR441_19275 PF07883 Cupin domain JR441_19285 PF07690 Major Facilitator Superfamily JR441_19290 PF00324 Amino acid permease JR441_19295 PF01546 Peptidase family M20/M25/M40 JR441_19300 PF00171 Aldehyde dehydrogenase family JR441_19305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JR441_19305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JR441_19310 PF17735 Biofilm surface layer A JR441_19315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JR441_19320 PF04321 RmlD substrate binding domain JR441_19325 PF16363 GDP-mannose 4,6 dehydratase JR441_19330 PF00483 Nucleotidyl transferase JR441_19335 PF04101 Glycosyltransferase family 28 C-terminal domain JR441_19340 PF02348 Cytidylyltransferase JR441_19345 PF08666 SAF domain JR441_19345 PF03102 NeuB family JR441_19350 PF00583 Acetyltransferase (GNAT) family JR441_19355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JR441_19360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JR441_19365 PF00535 Glycosyl transferase family 2 JR441_19370 PF09671 Spore coat protein (Spore_GerQ) JR441_19375 PF04241 Protein of unknown function (DUF423) JR441_19380 PF00860 Permease family JR441_19385 PF17261 Family of unknown function (DUF5327) JR441_19390 PF00171 Aldehyde dehydrogenase family JR441_19395 PF03167 Uracil DNA glycosylase superfamily JR441_19400 PF00535 Glycosyl transferase family 2 JR441_19405 PF08543 Phosphomethylpyrimidine kinase JR441_19415 PF08244 Glycosyl hydrolases family 32 C terminal JR441_19415 PF00251 Glycosyl hydrolases family 32 N-terminal domain JR441_19420 PF02378 Phosphotransferase system, EIIC JR441_19420 PF00367 phosphotransferase system, EIIB JR441_19425 PF01226 Formate/nitrite transporter JR441_19430 PF00874 PRD domain JR441_19430 PF03123 CAT RNA binding domain JR441_19440 PF02225 PA domain JR441_19440 PF05922 Peptidase inhibitor I9 JR441_19440 PF00082 Subtilase family JR441_19440 PF13860 FlgD Ig-like domain JR441_19445 PF00296 Luciferase-like monooxygenase JR441_19450 PF00881 Nitroreductase family JR441_19455 PF01098 Cell cycle protein JR441_19460 PF17368 Spore morphogenesis and germination YwcE JR441_19465 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JR441_19470 PF00510 Cytochrome c oxidase subunit III JR441_19475 PF00115 Cytochrome C and Quinol oxidase polypeptide I JR441_19480 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JR441_19480 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JR441_19485 PF04226 Transglycosylase associated protein JR441_19490 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JR441_19490 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JR441_19495 PF00288 GHMP kinases N terminal domain JR441_19495 PF10509 Galactokinase galactose-binding signature JR441_19495 PF08544 GHMP kinases C terminal JR441_19500 PF04138 GtrA-like protein JR441_19505 PF00440 Bacterial regulatory proteins, tetR family JR441_19510 PF08671 Anti-repressor SinI JR441_19515 PF04341 Protein of unknown function, DUF485 JR441_19520 PF00474 Sodium:solute symporter family JR441_19525 PF01323 DSBA-like thioredoxin domain JR441_19530 PF10518 TAT (twin-arginine translocation) pathway signal sequence JR441_19530 PF04261 Dyp-type peroxidase family JR441_19535 PF09375 Imelysin JR441_19540 PF03239 Iron permease FTR1 family JR441_19545 PF02581 Thiamine monophosphate synthase JR441_19550 PF02110 Hydroxyethylthiazole kinase family JR441_19555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_19555 PF03466 LysR substrate binding domain JR441_19560 PF03788 LrgA family JR441_19565 PF04172 LrgB-like family JR441_19570 PF12832 MFS_1 like family JR441_19575 PF09962 Uncharacterized conserved protein (DUF2196) JR441_19580 PF17785 PUA-like domain JR441_19580 PF10672 S-adenosylmethionine-dependent methyltransferase JR441_19585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_19590 PF10924 Protein of unknown function (DUF2711) JR441_19595 PF02378 Phosphotransferase system, EIIC JR441_19600 PF00082 Subtilase family JR441_19605 PF02378 Phosphotransferase system, EIIC JR441_19605 PF00367 phosphotransferase system, EIIB JR441_19610 PF00874 PRD domain JR441_19610 PF03123 CAT RNA binding domain JR441_19615 PF01501 Glycosyl transferase family 8 JR441_19620 PF09529 Integral membrane protein (intg_mem_TP0381) JR441_19625 PF01047 MarR family JR441_19630 PF00579 tRNA synthetases class I (W and Y) JR441_19630 PF01479 S4 domain JR441_19635 PF02225 PA domain JR441_19635 PF04389 Peptidase family M28 JR441_19640 PF04607 Region found in RelA / SpoT proteins JR441_19645 PF01040 UbiA prenyltransferase family JR441_19655 PF12459 D-Ala-teichoic acid biosynthesis protein JR441_19660 PF13193 AMP-binding enzyme C-terminal domain JR441_19660 PF00501 AMP-binding enzyme JR441_19665 PF03062 MBOAT, membrane-bound O-acyltransferase family JR441_19670 PF00550 Phosphopantetheine attachment site JR441_19675 PF04914 DltD protein JR441_19680 PF00106 short chain dehydrogenase JR441_19685 PF01063 Amino-transferase class IV JR441_19690 PF11975 Family 4 glycosyl hydrolase C-terminal domain JR441_19690 PF02056 Family 4 glycosyl hydrolase JR441_19695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JR441_19700 PF02378 Phosphotransferase system, EIIC JR441_19705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JR441_19710 PF05043 Mga helix-turn-helix domain JR441_19710 PF00874 PRD domain JR441_19710 PF08279 HTH domain JR441_19710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JR441_19720 PF02245 Methylpurine-DNA glycosylase (MPG) JR441_19725 PF00199 Catalase JR441_19725 PF06628 Catalase-related immune-responsive JR441_19730 PF07690 Major Facilitator Superfamily JR441_19735 PF12679 ABC-2 family transporter protein JR441_19740 PF00005 ABC transporter JR441_19740 PF13732 Domain of unknown function (DUF4162) JR441_19745 PF13396 Phospholipase_D-nuclease N-terminal JR441_19755 PF17280 Family of unknown function (DUF5345) JR441_19760 PF04542 Sigma-70 region 2 JR441_19760 PF08281 Sigma-70, region 4 JR441_19765 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JR441_19770 PF01256 Carbohydrate kinase JR441_19775 PF00664 ABC transporter transmembrane region JR441_19775 PF00005 ABC transporter JR441_19780 PF00664 ABC transporter transmembrane region JR441_19780 PF00005 ABC transporter JR441_19785 PF02322 Cytochrome bd terminal oxidase subunit II JR441_19790 PF01654 Cytochrome bd terminal oxidase subunit I JR441_19795 PF03390 2-hydroxycarboxylate transporter family JR441_19800 PF01435 Peptidase family M48 JR441_19810 PF01522 Polysaccharide deacetylase JR441_19815 PF03459 TOBE domain JR441_19815 PF00005 ABC transporter JR441_19815 PF17912 MalK OB fold domain JR441_19820 PF13556 PucR C-terminal helix-turn-helix domain JR441_19825 PF00171 Aldehyde dehydrogenase family JR441_19830 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JR441_19830 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JR441_19835 PF11611 Domain of unknown function (DUF4352) JR441_19840 PF16363 GDP-mannose 4,6 dehydratase JR441_19850 PF07730 Histidine kinase JR441_19855 PF00072 Response regulator receiver domain JR441_19855 PF00196 Bacterial regulatory proteins, luxR family JR441_19860 PF01546 Peptidase family M20/M25/M40 JR441_19860 PF07687 Peptidase dimerisation domain JR441_19870 PF04525 LURP-one-related JR441_19875 PF01717 Cobalamin-independent synthase, Catalytic domain JR441_19880 PF01717 Cobalamin-independent synthase, Catalytic domain JR441_19890 PF01144 Coenzyme A transferase JR441_19895 PF01144 Coenzyme A transferase JR441_19905 PF08241 Methyltransferase domain JR441_19910 PF01773 Na+ dependent nucleoside transporter N-terminus JR441_19910 PF07662 Na+ dependent nucleoside transporter C-terminus JR441_19925 PF06628 Catalase-related immune-responsive JR441_19925 PF18011 C-terminal domain found in long catalases JR441_19925 PF00199 Catalase JR441_19930 PF03600 Citrate transporter JR441_19935 PF00722 Glycosyl hydrolases family 16 JR441_19940 PF03123 CAT RNA binding domain JR441_19940 PF00874 PRD domain JR441_19950 PF11700 Vacuole effluxer Atg22 like JR441_19955 PF03880 DbpA RNA binding domain JR441_19955 PF00270 DEAD/DEAH box helicase JR441_19955 PF00271 Helicase conserved C-terminal domain JR441_19960 PF13472 GDSL-like Lipase/Acylhydrolase family JR441_19975 PF14176 YxiJ-like protein JR441_19980 PF05593 RHS Repeat JR441_19985 PF00892 EamA-like transporter family JR441_19990 PF00582 Universal stress protein family JR441_19995 PF00232 Glycosyl hydrolase family 1 JR441_20000 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JR441_20000 PF00367 phosphotransferase system, EIIB JR441_20000 PF02378 Phosphotransferase system, EIIC JR441_20010 PF04740 LXG domain of WXG superfamily JR441_20010 PF14449 Pre-toxin TG JR441_20020 PF16888 Domain of unknown function (DUF5082) JR441_20025 PF04616 Glycosyl hydrolases family 43 JR441_20025 PF16369 C-terminal lipocalin-like domain JR441_20030 PF09021 HutP JR441_20035 PF00221 Aromatic amino acid lyase JR441_20040 PF17391 Urocanase N-terminal domain JR441_20040 PF17392 Urocanase C-terminal domain JR441_20040 PF01175 Urocanase Rossmann-like domain JR441_20045 PF01979 Amidohydrolase family JR441_20050 PF00491 Arginase family JR441_20055 PF00324 Amino acid permease JR441_20060 PF00591 Glycosyl transferase family, a/b domain JR441_20060 PF02885 Glycosyl transferase family, helical bundle domain JR441_20060 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JR441_20065 PF07662 Na+ dependent nucleoside transporter C-terminus JR441_20065 PF01773 Na+ dependent nucleoside transporter N-terminus JR441_20070 PF01791 DeoC/LacD family aldolase JR441_20075 PF04198 Putative sugar-binding domain JR441_20080 PF06724 Domain of Unknown Function (DUF1206) JR441_20085 PF04346 Ethanolamine utilisation protein, EutH JR441_20090 PF03972 MmgE/PrpD family JR441_20095 PF01546 Peptidase family M20/M25/M40 JR441_20095 PF07687 Peptidase dimerisation domain JR441_20100 PF00005 ABC transporter JR441_20105 PF00528 Binding-protein-dependent transport system inner membrane component JR441_20110 PF00497 Bacterial extracellular solute-binding proteins, family 3 JR441_20115 PF00583 Acetyltransferase (GNAT) family JR441_20120 PF00296 Luciferase-like monooxygenase JR441_20130 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JR441_20145 PF11631 Protein of unknown function (DUF3255) JR441_20165 PF01497 Periplasmic binding protein JR441_20170 PF06486 Protein of unknown function (DUF1093) JR441_20175 PF02687 FtsX-like permease family JR441_20180 PF00005 ABC transporter JR441_20185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_20190 PF00072 Response regulator receiver domain JR441_20190 PF00486 Transcriptional regulatory protein, C terminal JR441_20195 PF01116 Fructose-bisphosphate aldolase class-II JR441_20200 PF01261 Xylose isomerase-like TIM barrel JR441_20205 PF01261 Xylose isomerase-like TIM barrel JR441_20210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JR441_20210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JR441_20215 PF07690 Major Facilitator Superfamily JR441_20220 PF01261 Xylose isomerase-like TIM barrel JR441_20225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JR441_20225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JR441_20225 PF00205 Thiamine pyrophosphate enzyme, central domain JR441_20230 PF00294 pfkB family carbohydrate kinase JR441_20235 PF04962 KduI/IolB family JR441_20240 PF00171 Aldehyde dehydrogenase family JR441_20245 PF00455 DeoR C terminal sensor domain JR441_20245 PF08220 DeoR-like helix-turn-helix domain JR441_20250 PF00248 Aldo/keto reductase family JR441_20260 PF10850 Protein of unknown function (DUF2653) JR441_20265 PF00083 Sugar (and other) transporter JR441_20270 PF00183 Hsp90 protein JR441_20285 PF00440 Bacterial regulatory proteins, tetR family JR441_20290 PF00171 Aldehyde dehydrogenase family JR441_20295 PF06271 RDD family JR441_20300 PF13570 PQQ-like domain JR441_20300 PF13360 PQQ-like domain JR441_20300 PF01011 PQQ enzyme repeat JR441_20305 PF17369 Family of unknown function (DUF5391) JR441_20310 PF06271 RDD family JR441_20315 PF04235 Protein of unknown function (DUF418) JR441_20320 PF07883 Cupin domain JR441_20325 PF00440 Bacterial regulatory proteins, tetR family JR441_20330 PF00106 short chain dehydrogenase JR441_20335 PF01047 MarR family JR441_20340 PF03788 LrgA family JR441_20345 PF04172 LrgB-like family JR441_20350 PF04230 Polysaccharide pyruvyl transferase JR441_20355 PF02595 Glycerate kinase family JR441_20360 PF00392 Bacterial regulatory proteins, gntR family JR441_20360 PF07729 FCD domain JR441_20365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JR441_20365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JR441_20370 PF02447 GntP family permease JR441_20375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JR441_20375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JR441_20380 PF00578 AhpC/TSA family JR441_20385 PF13192 Thioredoxin domain JR441_20385 PF07992 Pyridine nucleotide-disulphide oxidoreductase JR441_20395 PF00232 Glycosyl hydrolase family 1 JR441_20405 PF07702 UTRA domain JR441_20405 PF00392 Bacterial regulatory proteins, gntR family JR441_20420 PF00005 ABC transporter JR441_20430 PF04055 Radical SAM superfamily JR441_20440 PF06874 Firmicute fructose-1,6-bisphosphatase JR441_20460 PF02590 Predicted SPOUT methyltransferase JR441_20465 PF14116 YyzF-like protein JR441_20475 PF08240 Alcohol dehydrogenase GroES-like domain JR441_20475 PF00107 Zinc-binding dehydrogenase JR441_20485 PF10852 Protein of unknown function (DUF2651) JR441_20500 PF00583 Acetyltransferase (GNAT) family JR441_20505 PF18801 response regulator aspartate phosphatase H, N terminal JR441_20515 PF00491 Arginase family JR441_20520 PF00324 Amino acid permease JR441_20525 PF00202 Aminotransferase class-III JR441_20530 PF13426 PAS domain JR441_20530 PF02954 Bacterial regulatory protein, Fis family JR441_20530 PF00158 Sigma-54 interaction domain JR441_20545 PF13180 PDZ domain JR441_20550 PF00753 Metallo-beta-lactamase superfamily JR441_20555 PF09648 YycH protein JR441_20560 PF07435 YycH protein JR441_20565 PF13426 PAS domain JR441_20565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JR441_20565 PF00672 HAMP domain JR441_20565 PF00512 His Kinase A (phospho-acceptor) domain JR441_20570 PF00072 Response regulator receiver domain JR441_20570 PF00486 Transcriptional regulatory protein, C terminal JR441_20595 PF00709 Adenylosuccinate synthetase JR441_20600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_20605 PF00772 DnaB-like helicase N terminal domain JR441_20605 PF03796 DnaB-like helicase C terminal domain JR441_20610 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JR441_20620 PF14174 YycC-like protein JR441_20625 PF07690 Major Facilitator Superfamily JR441_20630 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase JR441_20635 PF03948 Ribosomal protein L9, C-terminal domain JR441_20635 PF01281 Ribosomal protein L9, N-terminal domain JR441_20640 PF02272 DHHA1 domain JR441_20640 PF01368 DHH family JR441_20645 PF09991 Predicted membrane protein (DUF2232) JR441_20655 PF07875 Coat F domain JR441_20660 PF01638 HxlR-like helix-turn-helix JR441_20665 PF02833 DHHA2 domain JR441_20665 PF01368 DHH family JR441_20680 PF07690 Major Facilitator Superfamily JR441_20685 PF06445 GyrI-like small molecule binding domain JR441_20685 PF13411 MerR HTH family regulatory protein JR441_20695 PF13474 SnoaL-like domain JR441_20700 PF00805 Pentapeptide repeats (8 copies) JR441_20705 PF07690 Major Facilitator Superfamily JR441_20710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JR441_20710 PF03466 LysR substrate binding domain JR441_20715 PF13673 Acetyltransferase (GNAT) domain JR441_20725 PF00753 Metallo-beta-lactamase superfamily JR441_20730 PF01047 MarR family JR441_20735 PF13673 Acetyltransferase (GNAT) domain JR441_20745 PF00583 Acetyltransferase (GNAT) family JR441_20750 PF04237 YjbR JR441_20755 PF01872 RibD C-terminal domain JR441_20765 PF07690 Major Facilitator Superfamily JR441_20770 PF08050 Tetracycline resistance leader peptide JR441_20775 PF03190 Protein of unknown function, DUF255 JR441_20780 PF13411 MerR HTH family regulatory protein JR441_20785 PF00892 EamA-like transporter family JR441_20790 PF03190 Protein of unknown function, DUF255 JR441_20795 PF02517 CPBP intramembrane metalloprotease JR441_20800 PF00083 Sugar (and other) transporter JR441_20805 PF14602 Hexapeptide repeat of succinyl-transferase JR441_20805 PF12464 Maltose acetyltransferase JR441_20810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JR441_20815 PF00356 Bacterial regulatory proteins, lacI family JR441_20815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JR441_20820 PF03372 Endonuclease/Exonuclease/phosphatase family JR441_20825 PF01084 Ribosomal protein S18 JR441_20830 PF00436 Single-strand binding protein family JR441_20835 PF01250 Ribosomal protein S6 JR441_20840 PF06071 Protein of unknown function (DUF933) JR441_20840 PF01926 50S ribosome-binding GTPase JR441_20845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JR441_20845 PF01568 Molydopterin dinucleotide binding domain JR441_20845 PF00384 Molybdopterin oxidoreductase JR441_20850 PF06107 Bacterial protein of unknown function (DUF951) JR441_20860 PF06866 Protein of unknown function (DUF1256) JR441_20865 PF02195 ParB-like nuclease domain JR441_20865 PF17762 HTH domain found in ParB protein JR441_20870 PF13614 AAA domain JR441_20875 PF06713 Bacterial PH domain JR441_20880 PF02195 ParB-like nuclease domain JR441_20880 PF17762 HTH domain found in ParB protein JR441_20885 PF02527 rRNA small subunit methyltransferase G JR441_20890 PF13932 GidA associated domain JR441_20890 PF01134 Glucose inhibited division protein A JR441_20895 PF01926 50S ribosome-binding GTPase JR441_20895 PF10396 GTP-binding protein TrmE N-terminus JR441_20895 PF12631 MnmE helical domain JR441_20900 PF01424 R3H domain JR441_20900 PF14804 Jag N-terminus JR441_20905 PF02096 60Kd inner membrane protein JR441_20910 PF00825 Ribonuclease P JR441_20915 PF00468 Ribosomal protein L34