        rlbA NONE
        recF NONE
        remB NONE
        gyrB    6793 ..    6818 + -10.6  -5.24129   ATCTAATCATAAAAA         GCCTTATTTC CAATAA GAAATAAGGC          TTTTTTCTGAACAAG 100 35
        gyrA    9466 ..    9486 + -13.3  -5.39721   GAAGTGTGAGAAAAA            GCGCAGCTG AAA TAGCTGCGC            TTTTTTGTGTCATAA 100 32
 JR441_00040   11371 ..   11383 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 99
 JR441_00045 NONE
 JR441_00050   11622 ..   11632 +  -5.4  -4.42235   TAGTAATACAAGATA                 TCAC ATA GTGA                 TTCTTTTTAACGGTT  70 84
 JR441_00055   14587 ..   14604 +  -8.5  -4.49556   ATCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf   14734 ..   14752 + -14.6  -5.80003   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTGTTAA 100 35
        guaB   17323 ..   17347 +  -9.3   -5.9873   ACAAATTAAAAACAT          TTGACAGGGTC TCT GACTCTGTCTA          TTTTTTTTATACTGA 100 50
        dacA   18793 ..   18816 +    -6  -3.63068   TTTAATCAATTGAAA          GAGCTCTGAT GGAT GTTAGGGCTC           TTTCGCGTAATATAC  61 36
        pdxS NONE
        pdxT   20724 ..   20755 + -15.2  -5.48213   AGGGTGGCAACGCGA      GAGCTCTCGTCCCT TTAT GGGGATGAGGGCTC       TTTTTATTTTCGATA 100 274
        serS   22085 ..   22106 + -10.1  -4.96646   CGTAAATTATGGAAA           GGCGTGCCT GACA AGGTGCGCC            TTTTTGCTTATGTAA 100 36
 JR441_00095   22352 ..   22374 +  -8.4  -5.79595   TTGGAGATTGTTTTG           TCCGTTGCAT TCG GTGCGGCGGA           TTTTTTATTTTAAAG 100 76
 JR441_00120 NONE
         ffs   26626 ..   26645 + -10.8  -5.60689   CATCAAATTTTCAGA            CTCACCTA ACAT TAGGTGAG             TTTTTTGTTATGTAA 100 50
        dnaX NONE
 JR441_00135 NONE
        recR NONE
 JR441_00145 NONE
        bofA   30005 ..   30020 +  -3.2  -5.00616   ATTCTAATATACGTC              GCTGAT GACG AACAGC               TTTTTTGAAAAGAAA  70 78
 JR441_00155   31821 ..   31833 +  -7.7  -3.09933   TTGTTTAGTTTTGAA                GGAAC TTT GTTCC                TTGAATAAGTTAAGA  65 99
 JR441_00160 NONE
 JR441_00165   32072 ..   32082 +  -5.4  -4.42235   TAGTAATACAAGATA                 TCAC ATG GTGA                 TTCTTTTTAACGGTT  70 84
 JR441_00170   35054 ..   35071 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf   35201 ..   35219 + -14.6  -5.68438   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTACTCA 100 35
        csfB   35564 ..   35577 +  -6.7  -5.70829   GCCATTATATTCATA               GACCT GAAA AGGTC                TTTTTTTGTACTCTT  93 25
 JR441_00185 NONE
 JR441_00190   37481 ..   37493 +  -4.8  -2.89511   AAGGAAAGATAGTTA                CCAG TAAGT CTGG                CTTTAAGTTCTGTCA  50 29
 JR441_00195 NONE
 JR441_00200   39616 ..   39630 +  -2.9  -3.38218   GTGATCGATGAAGCG               TTGAA AAAAA TTCAA               TTGTGACCTGTTTCC  46 5
        darA   40017 ..   40033 +  -3.7  -4.13014   TATTTGTCCTTCCAG              TCGATGA ATT TCATCAA              TTTTAAGGATCTGAA  58 3
 JR441_00210 NONE
        holB NONE
        ricT NONE
        yabA   42704 ..   42726 +  -8.4  -4.58663   AAAAAATAGGGAAAA           GGCTTCCG CATAAGA CGGGAGCC           TTTTTCAAAGGTACT  88 32
 JR441_00230 NONE
 JR441_00235 NONE
        rsmI   44644 ..   44667 +  -9.7  -5.24129   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 31
        metG   47474 ..   47515 + -10.3  -3.34398   TAAATAATGATAAGA CAAAAGGTGTTTCACGTGT AACA ATTCGTCGAACACCTTTTG  TGTTTCGACAAGAAA  80 34
 JR441_00255   48384 ..   48402 +  -3.8  -3.86524   AGTTCTACATGCTTT             CTTCTCCT CAT AGGATAGG             TTTGTCGACAAGTCT  56 97
 JR441_00260   49798 ..   49818 +    -9  -5.68023   ATATACTTATGTATT            CAGAGGGT TTTGC GCCCTCTG            TTTTTTTCGTTATAA 100 42
        rnmV NONE
        rsmA   51346 ..   51363 +  -9.9  -5.45802   AACGGATTGTATAAA             GCCCTTT TCTA AAAGGGC              TTTTTGTTTTGCGCA 100 14
        prtG   52402 ..   52424 +  -9.9  -5.80951   ATTAACAGTTGAAAA           CCTGCATAG GAGAG CTATGCGGG           TTTTTTATTTTACAT 100 36
 JR441_00280   52866 ..   52888 +  -8.5  -5.46706   GTGGCATTTTAACGG           GCAGTGAAC CTTTT GTTTACTGC           TTTTTGTTTTGCCCT 100 29
 JR441_00285   53217 ..   53239 +  -9.8  -6.09196   CGATAAGGATGTGAC           CCGGGGGACG TGC TGTTCCCTGG           TTTTTTTATTTTGGA 100 35
 JR441_00290 NONE
        purR NONE
 JR441_00300   55520 ..   55545 + -11.9  -5.67283   GAAATAATAAGAAAA         GTGATTCTGGG AGAG CCCGGGATCAC          TTTTTTATTTACCTT 100 34
       spoVG   56018 ..   56059 +  -5.3  -5.33848   ATAACCAAAAAGCAA GGACTGCTG--AAAGGGCT GACATA AGCCTTTTGCCGGCGGTCC TTTTTTAATTCTGAT  86 44
        glmU NONE
 JR441_00315 NONE
 JR441_00320   59246 ..   59270 +  -7.9  -4.46926   ACAATAATAGCTTAA          GGCGTAACC CTCCCGC GGTTACGTC          TTTTGTGCTAGAATG  82 34
 JR441_00325 NONE
         fin   60203 ..   60231 +  -8.9   -5.1523   ATTTATTCAATAAAA        AGCTTTGGTGTAG ACA CTAGACCAAAGCG        TTTTTCTGTTCTCGC 100 28
         mfd   63821 ..   63831 +    -4  -3.83205   TTTGTTACTCTCTGG                 TGTA TAT TACA                 TTTGATGTGACGGAT  56 43
       spoVT   64510 ..   64535 +  -9.1   -4.7497   AAATAGGTATGTAAA         GAACAGC-TCTC CTT GGGACGCTGTTC         TTTTTCATGCGTGCC 100 60
 JR441_00345 NONE
        mazG NONE
 JR441_00355 NONE
        yabP NONE
        yabQ NONE
       divIC   69397 ..   69414 +  -3.5  -2.90075   GTAGCCTTGTTGACA             CTTAAAT TTTT ATTTAGG              TATAATTAAGCAAAC  44 37
 JR441_00375   69880 ..   69903 +  -8.9  -5.58179   TATAAAATAAATGAA          GCATCCGTT CATCCC GACGGATGC           TTTTTTATTATCCTC 100 53
 JR441_00380 NONE
 JR441_00385   70189 ..   70211 +  -8.5  -5.85011   GGTCATCCTAAAAAA           TCGGTTTCT CTTGC AGAAGCCGA           TTTTTTTCATTTTTA 100 33
      spoIIE   72913 ..   72924 +  -2.2  -3.21276   GGGAATATATGAATC                TGAG AATC CTCG                 TATTCTCCAGGAGGA  43 77
 JR441_00395 NONE
        prkT   74724 ..   74735 +    -3  -3.61356   GGTTGAAAGTGTTAG                GATA TGAA TATC                 TTTAAAATACCTGCT  48 84
        tilS NONE
         hpt NONE
        ftsH   78759 ..   78778 + -11.4  -5.72616   TTCTTTCTAAAAAAA            CTGCCGGC TGAA GCTGGCAG             TTTTTTTATGTAAAT 100 47
 JR441_00420 NONE
        hslO   80587 ..   80607 + -11.9  -4.98531   TTCGTGACCAAACTA            CCCGCTAAG CTC TTTAGCGGG            TTTTTAATTTGAGAA 100 18
 JR441_00430 NONE
        cysK   82548 ..   82565 + -12.7  -5.88197   TTAAAAAAGCCAAAA             CTCCCGG TCCG CCGGGAG              TTTTTTTATATTTCG 100 37
 JR441_00440 NONE
        pabA NONE
        pabC NONE
        folP NONE
        folB NONE
        folK NONE
 JR441_00470 NONE
        dusB   88497 ..   88517 +  -5.4  -5.14894   TCTATTTGCTGCTCA            CTGCTAGT TTTAC GCTGGCAG            TTTTTCTGCTTTTTT  81 49
        lysS   90072 ..   90105 + -10.4  -4.77896   AACGCTAATAAAGAA     GAGCGGTATCCT CCATAGGGAA AGGATGCCGCTC      TTTTTAAATTCCTTA 100 33
 JR441_00485   91989 ..   92014 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 91
 JR441_00490   95054 ..   95071 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf   95194 ..   95209 +  -7.6  -3.31322   GACGCCGCCAAGCAA              TTGCAC GTTA GTGCAA               TTATGGAGGATTAGC  67 28
 JR441_00500 NONE
 JR441_00505 NONE
 JR441_00510 NONE
 JR441_00515   95609 ..   95620 +  -2.2  -3.09516   AACTGGACATCCTGT                CTGC GGAA GTAG                 TTCAGTGGTAGAACA  42 64
 JR441_00520 NONE
 JR441_00525   95775 ..   95785 +  -2.4  -3.95435   TGCCGGTTCAAGTCC                 GGCC CTC GGCA                 TTATGTTTTGCGCCC  51 15
 JR441_00530 NONE
 JR441_00535 NONE
 JR441_00540   96212 ..   96228 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 178
 JR441_00545   97845 ..   97870 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 91
 JR441_00550  100910 ..  100927 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf  101057 ..  101075 + -14.6  -5.63645   CCAAGCAAGTTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTATTTTGG 100 35
        ctsR NONE
        mcsA NONE
 JR441_00570 NONE
        clpC  105859 ..  105889 +  -9.9  -2.89602   TATAGAAGACGGAAA       TGAGGCATACA GCATGTAAG TGTATGCCTCA       CTTTCATATCAAGAA  75 41
        radA NONE
        disA NONE
 JR441_00590 NONE
 JR441_00595 NONE
 JR441_00600 NONE
 JR441_00605  112561 ..  112591 + -14.9   -5.8187   AACCGCGCGGTTAAA      GCGTCTCTGTCATG TTTA CATG-CAGAGACGC       TTTTTTTATTGGGTA 100 248
        cysE NONE
        cysS NONE
 JR441_00620 NONE
        rlmB NONE
        rae1 NONE
        sigH NONE
        rpmG NONE
        secE  117599 ..  117611 +  -6.9  -5.56673   TATTACTTGCCAAAA                CCCGT TCA GCGGG                TTTTTTATTGTGGCT 100 73
        nusG NONE
        rplK  118870 ..  118899 + -13.7  -3.72027   AATTTGTTTCTTGTC       GGGTTGCGAGTTT TAAC AAGTTCGCAACCC        TTATTCGTGGGAGGT 100 39
        rplA  119800 ..  119820 + -15.5   -4.9792   ATGCTTGTATATACA            GCCTCCATG TCT CATGGAGGC            TTTTTATATGGAATC 100 176
 JR441_00665 NONE
        rplL  120841 ..  120861 +  -9.7  -5.29846   TTACCTGTAGGGGAA            GCTCGCTTT TAT GAGGCGAGC            TTTTTCTTTGCCATT 100 48
 JR441_00675  121649 ..  121669 +    -4   -5.8901   TTTGTTTTTGGATGT            GGTTTTCT TAATT AGAAACCC            TTTTTTCTTTTGTCT  90 161
        rpoB NONE
        rpoC  129012 ..  129047 + -14.9   -3.3353   AATAACTGATTTAAT    GCTGCTGAAAGACTG CAAAAA CAGTCTTTCAGCAGA     TATATTTATGAAAAA 100 36
 JR441_00690  129437 ..  129471 +  -8.8  -4.68528   TTTATAACGTACTTT     TGTTTTTGCGTAAGAT TCC ATCTTGTGTAAAGACA     TTGTTTTTTGCCTTT  90 34
        rpsL NONE
        rpsG NONE
        fusA  132652 ..  132669 +  -8.5   -3.2918   TTGTAAGATGAGGAA             GTGAAAG CTTT CTTTCAC              TTCCTATCACTCTAT  70 75
         tuf  133928 ..  133947 + -13.6  -5.72053   TAGTATGATTTTAAA            CGAGACCC CTGT GGGTCTCG             TTTTTTGTTTGCTTA 100 41
 JR441_00715  135119 ..  135150 +    -5  -4.82901   GAGGTTGCTGACACA      CCCGGCCGCTTTGC CATG GCAAGGTGTTCAGG       TTTTTCTCACGGAGA  74 177
        rpsJ  135502 ..  135512 +  -2.6  -3.34962   GTGTCGATATCGAAA                 TTAA ACT TTAA                 TTCTAAAATATAGAA  46 15
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY  145661 ..  145686 + -10.5  -3.14132   ATTTATGAAAAACTA         GAGGAAATGGA TTTA TCCATTCCCTC          TTAATAAAGAGAGGA  79 25
 JR441_00830 NONE
         map  147182 ..  147202 +  -2.6  -2.89447   CTTGGGTGAACATTG            GCAAGA CCGAATTCA TCTTGC            TGCTTGTCGTTGGAA  42 95
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK  148706 ..  148739 +  -5.4  -3.66666   CTAAACAATGGGGAA     TTTCGGATGGAATC TCATAT GATTCTATTCGAGG      TTTCGACGTTTTGAA  60 138
 JR441_00865  149715 ..  149735 +  -4.7  -2.55002   CGCAAAGACGATTGA            CTAGTTTCC CTT GTGAACTAG            GATTTTCGTGTGTTT  49 26
        rplQ  150135 ..  150148 +  -3.9  -2.85346   ACGGAGCACCAATGG               CAATT ATCG AATTG                GTTTAATCACATATT  46 6
 JR441_00875 NONE
 JR441_00880 NONE
 JR441_00885 NONE
        truA  153571 ..  153581 +    -4  -3.34398   AAAGTTATAAGATAT                 CATA TGG TATG                 TATTTCAACCCCACG  50 77
        rplM NONE
        rpsI  154549 ..  154571 +   -12  -5.65927   TTACGTTTTCAAAAA           GCTCTCGACC TTG GGTTGGGAGC           TTTTTTCTTTCAATA 100 43
 JR441_00905  155763 ..  155786 +  -3.1  -5.14563   GTGAAAGTATGAAAA          GCAGCGACCT GTTAG AGGG-GCTGC          TTTTTTCATAACCAA  73 29
 JR441_00910 NONE
        cwlD  157149 ..  157168 +  -7.1  -4.85396   CACAGAAAAAGGAGA            CCCTCCG GAGTAA TGGAGGG             TTTTCTTGTGGTTCT  83 13
        salA  158324 ..  158342 +   -11  -2.95234   GGTATAAAAGGTGAA             CCGGGATT CCA GATCCCGG             CTTTCCCTTTATTCA  79 34
        kbaA  159765 ..  159779 +  -4.2  -3.40639   ATGTAAAAGAATAAT               GTCTCC ACC GGAAAC               TTGCTTGGTCACATT  50 176
 JR441_00940  162347 ..  162370 +    -9  -3.34652   CCCTGTCTTGTTTAG          TTTTGAAGGA TCAT TCCTTCGAAA           TGTGTTCTTTGAAAA  73 92
 JR441_00945  165411 ..  165428 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf  165540 ..  165550 +  -2.4  -3.21235   TGTGAGAGTAGGACG                 CCGC CAA GCAG                 ATTTATTAATTCTAC  43 17
 JR441_00955  165649 ..  165697 +  -5.1  -3.09516   ATCGGTCGTAGGTTC GAATCCTACCTGCGGAGCCATTG CTT CCATAGCTCAGCAGGTAGAGCAC TTCCATGGTAAGGAA  52 6
 JR441_00960  165766 ..  165786 +    -4  -5.80364   ATGTATTATTACCAA            GGTTTCTC ATAAG GAGAAAGC            TTTTTTTATTGCGAT  90 46
 JR441_00965  165881 ..  165895 +  -8.6  -3.43564   GTCTTCCGCTCCATT               TATCCC AAC GGGATA               TTGTAAATTGAATTG  73 28
 JR441_00970 NONE
 JR441_00975 NONE
 JR441_00980  166325 ..  166341 +  -2.3   -3.8709   CGCACAGCGATGTGC              GTAGT CAGTCAA ACTAC              TTTATCGGAGAGTTT  51 176
 JR441_00985  167959 ..  167982 +    -9  -3.34652   CCCTGTCTTGTTTAG          TTTTGAAGGA TCAT TCCTTCGAAA           TGTGTTCTTTGAAAA  73 92
 JR441_00990  171023 ..  171040 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf  171163 ..  171178 +    -4  -5.40072   GACGCCGCCAAGCAA              TTGCAC GTTA GTGTAA               TTTTTTTAAAAAAAG  78 28
 JR441_01000  172962 ..  172985 +    -9  -3.34652   CCCTGTCTTGTTTAG          TTTTGAAGGA TCAT TCCTTCGAAA           TGTGTTCTTTGAAAA  73 92
 JR441_01005  176026 ..  176043 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf  176173 ..  176191 + -14.6  -5.98675   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTTTATC 100 35
 JR441_01020  178358 ..  178380 +  -9.2  -5.37043   GCATAAAATAGAGAA           GCCCAGAT GAATGAG ATCTGGGC           TTTTTTATATAACAT 100 35
 JR441_01025  179420 ..  179439 +  -9.3   -5.1287   GAAAGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 31
 JR441_01095 NONE
 JR441_01100 NONE
 JR441_01105  194257 ..  194267 +  -2.6  -4.52589   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTTATGTGGAGGGG  60 27
 JR441_01110 NONE
 JR441_01115  194442 ..  194464 + -10.7  -5.79595   GCTAGCCCAGTCACA           GACACCTTT GATCA AAAGGTGTC           TTTTTTCTTTTCGGA 100 28
        sigW NONE
        rsiW  195865 ..  195891 +  -8.8  -5.41143   AGTCCGAAGGGAGAA         GAGTAAAGCG CGTTAGC CGCTTTGCTC         TTTTTTTGCGGGCTG 100 20
        cdaA NONE
        cdaR NONE
 JR441_01140  199781 ..  199793 +  -3.4  -4.26938   CACATGTTGTAAAAT                CAAG CTTGT CTTG                TTCTTATTTTCTCAA  59 142
        glmS  201910 ..  201941 +  -8.8  -4.96848   GAGTAATAAATGTTT      AACCCCTTTGGATA AGAT TGTCTAAAGGGGTG       TTTTTATGTCCAAAA 100 35
 JR441_01150  202289 ..  202311 +  -3.4  -4.96435   CTTACAATGTACTTG           TGGGCCTTAG GTT TTAAAGCTCA           TTCTTTTTTTATTGA  70 227
        adaA NONE
        adaB  205044 ..  205101 +  -8.1  -3.86307   TTAGTTGAAGTGAAG CCGACAATTTTCAGGATTCAATGATCTA ACA TA-ATCATTGAAATTTTGAAGTTGTCGG CTTTTTTGTTGGAAA  77 370
 JR441_01170 NONE
 JR441_01175  209386 ..  209397 +    -3  -3.18264   AATCTAAGCATTTAT                CAAA TGGA TTTG                 TTACTCAATACAAAA  45 46
 JR441_01180 NONE
 JR441_01185 NONE
 JR441_01190  210935 ..  210959 +  -7.2  -5.51402   TGTCGAAAGATCTAA          CATCCGCT GTTGTTATG AGCGGATG          TTTTTTTACATCTAT 100 205
 JR441_01195  211557 ..  211576 +    -8  -4.58395   ACAGAGATATAAAAA            TAAACATC AAAA GATGTTTA             TTTTTACACCATACA  84 29
 JR441_01200  212868 ..  212892 + -10.7    -5.626   TTTCGAAAGTTCTAA          CATCCGCTCGT TAT ACAAGCGGGTG          TTTTTTTATACGCTC 100 41
 JR441_01205  213578 ..  213589 +  -2.2   -2.8829   TTAATGTCTTCTGGG                TGGA TGAG TCCG                 ATTTCATCATGGTAT  41 190
 JR441_01215 NONE
        ybdJ NONE
        ybdK NONE
 JR441_01230  217014 ..  217032 +  -6.6  -2.54459   CAAGGCCGAAATCGA             GGAGGCAG AGC CTGCCGTC             ATTGATGATGATATT  54 288
 JR441_01245  219767 ..  219791 +  -9.4    -5.252   GTGTGAATTATTAAG          TAAGCTGTTC ATGTA GGACAGCTTA          TTTTTTATGAGAATC 100 27
 JR441_01250  221482 ..  221501 +  -7.2  -6.28401   AATAACGATAAAAAA            GAGACATT CGCG GATGTCTC             TTTTTTTATTTTTTG 100 36
        csgA NONE
 JR441_01260  222039 ..  222059 + -13.3  -4.89521   TGAGCATGAGATTTA            GAGCCCTGT CGT GCAGGGCTC            TTTTATTTAGGATGT 100 25
        cypC  224304 ..  224328 + -10.1   -4.9445   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 34
 JR441_01280  226498 ..  226519 + -10.9  -5.48054   AAATAAATAAGAAAA           CCTTGCGAT AGTT GTCGCAAGG            TTTTTTGCTTTTAAT 100 40
 JR441_01295  229412 ..  229459 + -14.5  -3.03124   TCACTTTCTAATATA TCGTTGACTAAAGCAACTATA TGTGAT TATAATTGCCTTAGTCAACGA TATTAGAAAGTGGGG 100 48
 JR441_01300  230389 ..  230407 +    -3  -2.61912   ACGGTGGGATTTGGA             GCTGTCAT GAA AAGACTGC             ATTATGCGTGGATCA  41 16
 JR441_01305  231662 ..  231692 +  -8.4   -5.9667   GAGGACAAAGGGAAA       GCATCTCTGATT TGGGATT ATTCAGAGATGC       TTTTTTTGTATTTTT 100 42
        purT  235013 ..  235038 + -13.4  -5.84381   AAAATAGAGTTTGAA         CAGGCCTTGT CATCGT ACAAGGCCTG          TTTTTTTCTTCCTCC 100 34
 JR441_01325 NONE
 JR441_01330  236449 ..  236478 +  -7.9  -5.80003   TAGTCTTCAAAGAAT       AGCAGTTTCCTTG ATTT TAAGGGAACTGCC        TTTTTTATTTATTGC 100 24
        cesB  237579 ..  237603 +    -5  -3.21438   ATAATAATAGAATTT          GAATGCTGCT TTTTT GGGAGCATTC          TATGTTATCATGCTT  53 93
        pssA NONE
 JR441_01345 NONE
 JR441_01350  239506 ..  239532 +  -4.4  -5.40072   TATGAAGAGTAAAAA        GAGGAGCTTGC ATAAAC GCA-GCGCCTC         TTTTTTTGAAGAAAG  81 29
 JR441_01355  239837 ..  239856 +  -7.2   -5.4505   GAGAATCCAGCTAAA            GCTTCTTT CAAC AGAGAAGC             TTTTTTGTTGGCAGG 100 27
 JR441_01360  241286 ..  241306 + -11.2  -4.70659   ATCAAGTGAGCGGTG            TCCCCTGT GGTAA ACAGGGGA            TTTTTACATATCGCA  95 32
 JR441_01365  242272 ..  242288 +  -2.3  -5.14163   GAGGAACTACAAAAA              TAGTTTT CAG ACAACTA              TTTTTATTAGTGAGT  69 23
 JR441_01370  243448 ..  243470 + -12.8  -5.76633   TGCTGAATAAAAAAA           GAACACCTCG TAT TGAGGTGTTC           TTTTTTTCTATATGC 100 31
        gamR  248436 ..  248492 +  -5.3  -4.27026   GAACGAAATTCACCG TAGAACAGTCATATCATTCATAAAGCA ATG TGTTTTAAGAAGGGAATGGTGGTTCTA TGTTTTTATTTACGA  67 3
 JR441_01395  248774 ..  248794 +  -8.3  -5.41941   GCGGTCTAAATCAAA            CAGCCAG AATAAAA CTGGCTG            TTTTTCTTTAATTTC 100 32
 JR441_01400  250059 ..  250080 + -14.5  -5.48213   GTGAAAATCGAAAAA           GAACCTGCC TGAA GGCAGGTTC            TTTTTATTTTGAATA 100 37
        glnK NONE
        glnL  257630 ..  257648 +  -6.7  -5.52384   AGGATATAAACCAAA            CAGCC-GG CTGA CCAGGCTG             TTTTTTTGCTGCGCA  93 32
        kdgD NONE
 JR441_01440  260277 ..  260307 +  -9.1  -3.85698   TGAAGCCGTAATGGT      GCT-GGAAAGAGGC ATGC GTCTCTTTCCCGGC       TTTATCACAGCCAGC  80 30
        gudP NONE
        gudD  263117 ..  263129 +  -2.7   -4.0127   CGGAAGCGTCCATGT                CTTGT GCG ATAAG                TTTGATTGTAAATAT  55 14
 JR441_01455  263910 ..  263935 +    -4  -5.40072   AATAATGGTGAGCAA         CCGCAGTT GAAACGTAAG AGCTGCGG          TTTTTTTAAAACCAA  78 36
        garD  265715 ..  265736 +  -5.1  -5.28176   ATGGTTATTAAAAAA           GAGGGT-GGC GAT GCCTGCCTTC           TTTTTTCTGCCTCCA  84 217
        mphK  267013 ..  267038 + -12.6  -5.28414   GGTGGTACCACGAGA         CCCTCGTCCT TTGCAT AGGACGGGGG          TTTTTGTGTTTCTTA 100 316
        rtpA NONE
 JR441_01475  268255 ..  268296 +  -5.3  -5.50313   ATAATTTTTATAAAA CACACACGTT-TTTCAATTA CAA TAAGTGTAATTACGTGTGTG TTTTTTGATTTTGTA  88 37
        ycbL NONE
        ycbM  269958 ..  269976 +  -2.4  -3.55444   CGCATGACATATTAA             TCGTAAGA ATT TCTTAAGG             TTTGAGAAATAAAAA  47 26
 JR441_01490 NONE
 JR441_01495  271703 ..  271725 + -17.8  -3.81339   CCAATATGTATAAAA           GGCCGATGCT GTC AGCATCGGCC           TTTCCATTATGAGTC 100 51
        cwlJ  272868 ..  272888 + -14.1  -5.27335   ATTTTAGAGACAGGA            CACCGTTCA AAT TGAACGGTG            TTTTTCTTTGAAAAG 100 34
 JR441_01515  273708 ..  273737 +  -9.4  -5.86609   ATAACTGATAAAGAG       CACTGAGTCATT CTGCGA AATGGCTCGGTG        TTTTTGTTTTTTTAA 100 37
 JR441_01520 NONE
        phoD NONE
       tatAD  275958 ..  275980 + -13.5  -5.60993   GGGCTGAATGCTGAT           GAGGCAGAC ACCGG GTCTGCCTC           TTTTTTTATGAAAGG 100 34
        tatC  276791 ..  276844 + -11.8  -4.51847   ATTGTGCGGCCGTAA CAGCGGCGATTCTCAATGCCCGGACA ATCG TGTCCAGGC-T-GAGGCTCGGCGCTG TTTTGTCGATTGTTT 100 78
 JR441_01545  278585 ..  278607 + -10.6  -4.44797   GTAAACATAAAAAAA           GCCCCTGA ACACTAG TCAGGGGC           TTTTCATATTAATGA  95 37
        ansZ  282012 ..  282029 +    -7  -6.17292   GAGTATTGAAGAAAA             GAAGGC GAATAA GCCTTC              TTTTTTTTTGGCTTT 100 32
        lipA  282817 ..  282847 +   -15  -3.60151   AACTAATGAGATAAA       TAACCTTGAAGAGT CCT ATTCTTCAAGGTTA       TTCTGCTTTCAGCAC 100 35
 JR441_01575  284549 ..  284573 + -15.9  -6.02919   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 35
        natA NONE
        natB  288305 ..  288323 +  -7.5  -5.05601   AATAAACTTGCAAAA             GGAGAAA TACAC TTTCTCC             TTTTTGTATATCCTG  89 36
 JR441_01600  289358 ..  289398 +  -9.9  -5.02606   TCAGCGACATTTTTA  AATAAAAAGGAAATAGCCG TCA TGGCTATTTCCTTTTGGTG  TTTTATTCTTTGATG 100 21
 JR441_01620  293916 ..  293927 +  -4.4  -3.83561   TTCCATATCCCATAT                GATG CTTC CATC                 CTTTTTTTGAAGGGC  58 180
        rapJ  295523 ..  295545 + -12.8  -5.70829   TTTCAATAGGAAATG           GCAGAGAACT ACA GGTTCTCTGC           TTTTTTTGTGCTGTT 100 32
 JR441_01635 NONE
 JR441_01640  298122 ..  298140 +  -8.8  -5.53991   TAATGATTGAAGTAG             CCCGGC ATTCTTA GCCGGG             TTTTTTTAGTACATA 100 38
 JR441_01645  299259 ..  299285 + -13.1  -4.55295   GGTTAAATCATAAGA         TAGTGTGCGCC GGAGG GGTGCACACTA         TTTCTTTGTGAGAAA 100 28
        znuC NONE
        znuB  300816 ..  300839 +  -9.7  -5.60993   CCGATAACATGAAAA          GCAGTTTTC CCTAGA GAAAACTGC           TTTTTTTATAGAAAC 100 34
 JR441_01665 NONE
 JR441_01670 NONE
 JR441_01675 NONE
 JR441_01680  304775 ..  304797 +  -4.8   -5.4505   AATAAAACAAAACAA           GGAGGGAGGT TCA ATGTCCTTCC           TTTTTTGTTACCGAA  88 36
 JR441_01685 NONE
 JR441_01690  307575 ..  307599 + -16.5  -4.75174   CAGCAATAATAAAAA          CCCCGCTTGTG GAA CATAAGCGGGG          TTTTTCAATTACATC 100 32
        niaP  309120 ..  309139 +  -9.3  -4.02139   TGTCAACAATCTGAG            GCACCTC TTGAAT GAGGTGC             TATTTTTACATTTGC  85 253
       opuAA NONE
       opuAB NONE
       opuAC  313974 ..  313993 + -13.6  -5.15969   TAAATAATGAAGAAA            GCAGCCTG TAGC CAGGCTGC             TTTTTTGCGTTAAGA 100 34
 JR441_01730  316746 ..  316768 + -13.4  -4.36729   GTTTTAACGATTGCT           GCCCGCCG GCTTGTA CGGCGGGC           TTTTGAGTTATTCAT 100 34
 JR441_01735  317332 ..  317359 +    -5  -5.95539   AGAAGAAATAAAAAA        GAAATCATCT TGAAAAAT AGATGGTTTC         TTTTTTTGTTTGGAA  91 13
        amyE  319611 ..  319631 + -12.7   -5.5112   CGGGACTTACCGAAA            GAAACCATC AAT GATGGTTTC            TTTTTTGTTCATAAA 100 54
 JR441_01745 NONE
 JR441_01750  322378 ..  322428 +   -18  -4.29621   TGCAAGATTAGGAGT GTAATAGAAAAAAGCAGTACATGC CCA GCATGTACTGCTTTTTTATGTTAA TTTGCTTTCTTTGTC 100 22
 JR441_01760 NONE
 JR441_01765 NONE
 JR441_01770  326086 ..  326109 +  -5.2  -5.53991   ATAAATCAAGGACTG          GCAGGGCGAT CTTT ATGACCCTGC           TTTTTTTGATAGATC  88 37
 JR441_01780  328128 ..  328139 +  -2.2  -2.78504   GTGACATCCATACGG                GTTG AAGT CAGC                 TGATCTCTCTTGTTC  41 11
        nadE  329101 ..  329119 +   -16  -4.50976   AATAAGTTGAAGAAA             GCCCGCTC TTG GAGCGGGC             TTTTGTCGTGTACAG 100 36
 JR441_01795  330563 ..  330603 + -22.1  -4.49939   GGGATCTTTATCAGC  CGATGTAAAAAGCCGTGCG CAG CGCACGGCTTTTTTTATCG  TTTTATCCCTTGTAT 100 18
 JR441_01805 NONE
         cah  333493 ..  333513 +  -5.3  -5.60993   GATAAATGTGAAAAG            CCGCCGCAT ATC ATCAGGCGG            TTTTTTTCTGCAAAC  88 39
 JR441_01815  334337 ..  334362 +  -2.6  -4.67256   GTGTGGAAGGATGGA         GGAAGCTGATG TTTTT TGTC-GCTTCC         TTTTCTCCTTTATTC  62 17
 JR441_01820 NONE
        pruA  337022 ..  337048 +  -8.7   -3.7829   CTAAGCGGGACTAAA         TGGGCATCCTC CCTGC GGGGGTGTCCA         TTTCATCCATATACT  78 37
        putP  338561 ..  338599 + -16.2  -3.08032   GTCACAATAAAGATC   GAAAGGAGGAGGAAGGGG CTG TCCCTTTTTCCTCTTTTC   TCCTTTTAAGCGGCC 100 31
        putR  339952 ..  339967 +  -7.6  -3.94853   GAAATAAAAAAGAAA              CCAGTA CTTG TACTGG               TTTCGTCTTCACTTA  74 34
        ffoR  343866 ..  343887 + -10.2  -3.60805   GGTACATAAATAAAA           CAGCCCTT GGGGGA AAGGGCTG            TTTGCCATCAGCTGT  80 28
 JR441_01885  354147 ..  354166 +   -10   -5.8901   TTTAGGATTTTGACG            GACACGCG TTTG TGCGTGTC             TTTTTTATTTTCTCT 100 36
 JR441_01890  355536 ..  355549 +  -2.3  -2.78596   AGGATACCAGGAAGG               CGCAG AATA CTGGG                TATCATGGAAAAATC  41 394
 JR441_01900  356160 ..  356173 +  -3.9  -3.29461   GTAATCATTCTATTT               TAATG GAGG CATTA                TTATGAAAAAAATTC  50 118
        zinU  357377 ..  357396 +   -10  -5.52384   ATCAATAGAAAAAAA            GCCG-TCCC ATG GGGAACGGC            TTTTTTTAATGAAAC 100 33
 JR441_01925  359666 ..  359697 + -11.8  -4.87665   TGCTGACGAAGAGAT      TAGAAAGAGCGAAT AATG GTTCGCTCTTTTTA       TTTTTATGCATAAAA 100 10
 JR441_01930  360104 ..  360125 +  -9.5  -4.39407   ACATTAAAATGGTAA           GCATCCAAT TGGA ATTGGGTGC            TTTTGCGTTATTTAC  91 34
        bglC  361686 ..  361710 + -12.2   -4.8622   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG 100 30
        hxlR  366383 ..  366403 +  -8.3  -5.91981   AAAGAATCGTTGTAA            GACGCTCTT CGC AAGGGTGTC            TTTTTTTTGCCTTTT 100 26
       srfAA NONE
       srfAB NONE
       srfAC NONE
       srfAD  393108 ..  393130 +  -9.9  -5.80817   CAACCGTGATCAAAA          GCGG-ACAGC TTCG GCTGTTCCGC           TTTTTTTGTGTTGAA 100 32
 JR441_02005  397897 ..  397910 +  -6.7   -3.3382   GGAAGATCAGGGATG               TACGG CTTC CCGTA                TTCCTGTGTGCTAAA  61 465
 JR441_02040  403141 ..  403160 +  -3.6  -2.73635   AACAAAAAGGAGGAG            CTTGATCA TGGC TTATCAAG             ATTTCAGAGAATTTC  45 21
        bsdC NONE
        bsdD NONE
 JR441_02055  405283 ..  405303 + -16.9  -5.74122   ACGGTAATAGCGATA            GCCTGACGC CAT GCGTCAGGC            TTTTTTTATATAATG 100 34
 JR441_02060  406193 ..  406220 + -15.6   -4.1021   GATCAATAAAAAAAA        CAGCCCGCAGAT CAAA ATCCGCGGGCTG         TTTCTGATTATAAGA 100 32
 JR441_02070  409746 ..  409764 +  -3.7  -5.89947   TATTGTCTAAAAAAA             GCGCCCC CTCTA GGGGTTC             TTTTTTTTCGATTTA  90 31
       gerKA NONE
       gerKC NONE
       gerKB  414102 ..  414126 +  -8.5   -5.1167   AAAAAATGATAAAAA          GAGCGGGGG GATGCGG CCGCCGCTC          TTTTTATGTTCACTT 100 32
        yclJ NONE
        yclK  418670 ..  418694 + -12.1  -5.00616   AATAGCATACAGGGC          GGCGGCATCAT CTG ATGGAGCCGCC          TTTTTTGCACACCGC 100 36
        rapC NONE
        phrC  420085 ..  420108 + -12.5  -5.45802   TGACGTAAGAACAAG          CCCCTTCTC ATTTGC GAGAAGGGG           TTTTTCTTTTCAAAA 100 33
        yclN NONE
        yclO NONE
        yclP NONE
        yclQ  425990 ..  426014 + -12.2  -5.84381   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 35
 JR441_02180  430020 ..  430035 +  -6.1  -5.72616   CCGCTGGTGAATCAA              TCCCC TGTAAC GGGGA               TTTTTTTATGTCCGT  91 31
        gabT  432847 ..  432866 +  -4.2  -2.56164   TGAAGGGCTCAGCAT            CTTGGAGG CGGG CCTGCGAG             CTTAATCATTGGAAA  47 1
 JR441_02195  434424 ..  434468 + -13.9  -3.65529   GGATCAAAACAATTT TTAAACAGCCAATTGTCGATA GTT TATCGGTGATTGGTTGTTTAG TTTGGATACGAATAT 100 121
        glcU NONE
 JR441_02225  440994 ..  441020 +    -8  -5.26875   GGTTAAACAAAAAAA         GCGACCCAGA CATGACA TCTGGATCGC         TTTTTTGATTAGGCA  95 35
 JR441_02245  444398 ..  444417 + -13.6  -5.61881   AGAGGAAAGAGAAAA            GGCTCCTG AAAT CAGGAGCC             TTTTTATTTTTAAAA 100 17
 JR441_02250 NONE
 JR441_02255 NONE
 JR441_02260  447597 ..  447619 +  -9.1  -5.69473   CTCAACCAATAATCA           CCCCGTGAC ACCAC GTCACGGGA           TTTTTTTCTAGTATA 100 29
 JR441_02265  448732 ..  448770 + -19.7  -3.90291   TTAAGAAAGCTCTGA  TGAATCAGGCCGGGGCAG ATGG CTGCCCCGGCCTG-TCCA   TTTCCTTACGAAAAT 100 26
        lepB  449517 ..  449542 +  -8.2  -5.31275   AAATTTCTGATGAAA         CAGGGCGGAG CCGTTT TTCCGCCCCG          TTTTTTATGATAGAG 100 114
 JR441_02280  450590 ..  450613 + -11.8  -4.05861   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG  91 32
 JR441_02290  451668 ..  451689 + -10.2  -5.37593   GGTACTATAAAAAAA           GAGAGTCC TAAGAT GGACTCTC            TTTTTTAGTTTGGCA 100 31
        pxpA NONE
 JR441_02300 NONE
 JR441_02305 NONE
        pxpB NONE
 JR441_02315 NONE
 JR441_02320 NONE
        lipC  457913 ..  457950 +   -18  -2.79679   AAGAATTATCAGTTT   CATAGAAAACGCGCCT CATGAC AGGCGCGTTTTTTATG    TGTGATCGAAATATT 100 21
 JR441_02330 NONE
        pbpC NONE
 JR441_02345  461792 ..  461813 + -13.1  -4.76312   GATATTCCATAAAAA           GCATCAGCT TACC AGCTGATGC            TTTTTCAATATTGTC 100 29
        mtlR  464069 ..  464092 + -11.8  -4.99035   TGTAAACCTGCATGG          CACACGTCAA AAAT TTGGCGTGTG           TTTTTCTGTGGATGG 100 36
 JR441_02355  465787 ..  465816 + -14.4  -3.66178   ACATTCATAAAAGAA       GAAGCCCGTCCAC TTTAT GTGG-CGGGCTTC       TTTGCAGTTGCACAG 100 31
 JR441_02365 NONE
        lyxE  467932 ..  467954 +  -8.5  -5.47159   GATCCAAGAATATAA          GGATGAGGCT TAGC AGCC-CATCC           TTTTTTGTATTGAAA 100 26
 JR441_02375 NONE
 JR441_02380  469466 ..  469487 + -12.9   -5.7946   AAAGAATAAGACAAA           CCGCCCGGC GTAC GCCGGACGG            TTTTTTTATTGCAAA 100 421
         amj  470393 ..  470415 +  -9.2  -5.16572   GGTTTTAATAAAAAA           GGCTGGAT CATAAAA ATCCAGCC           TTTTTTGCGTTCCCT 100 33
        lrpC NONE
 JR441_02400  473596 ..  473614 + -10.3  -5.52986   TAAATAATAAAAAAA             CCTGTGC CTATC GCACAGG             TTTTTTTAGTGGACT 100 34
 JR441_02405 NONE
        epsK NONE
 JR441_02415 NONE
 JR441_02420 NONE
 JR441_02425  480805 ..  480825 +  -9.7  -5.95286   AGATACAGAATAAAA            CAGAGGCGA TAT TAGCCTCTG            TTTTTTATTTTTGGT 100 28
        kimA  483104 ..  483127 + -12.5  -5.00616   AAAAGTAAAGCTCTA          GGACCAAGG GAATTA CCTTGGTCC           TTTTTTGCGGGAAAA 100 33
        mutT NONE
 JR441_02440  485483 ..  485537 + -11.9  -4.51812   CATTCTCGAAACAGA CA-A-AAGGACAAATGCATCTTGTTTC AAA GCAATGAGATGCATTTGTCCTTGTATG TTTATTCTTATCAAA 100 114
 JR441_02470  489181 ..  489206 +  -6.1  -5.52384   ATGGAATAGCAGAAA         GCAGACGGA CACCGCGA TCCGCCTGC          TTTTTTTAGTGGAAA  91 32
 JR441_02475  489712 ..  489737 + -12.6  -5.79526   CCTGTAAATAAAAAA         GCGATCCGGC ACATCA GCTGGATCGC          TTTTTTTTGGAATCT 100 63
 JR441_02480 NONE
 JR441_02485  490506 ..  490528 +   -15  -3.78419   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 31
        dctS NONE
        dctR NONE
        dctP  496237 ..  496255 +  -8.8  -5.73672   AGTCTGAAAAAAGAA             CGGCCC ATCCATG GGGCCG             TTTTTTTAATTGTTT 100 34
 JR441_02515  497648 ..  497677 + -12.3  -5.24129   ACAAATGCTATAATA       CAAACAGTGCCTA ATGT TAGGCACTGTTTA        TTTTTTGTCGAAAAA 100 244
 JR441_02520 NONE
 JR441_02525  499436 ..  499447 +    -3  -4.63479   GCTCACGTAAATCAA                TATC AAGT GATA                 TTTTGGTTTATACTA  62 69
 JR441_02530  499824 ..  499850 + -16.6  -5.00895   CAAATCCTGTGTAAT         CGCGCTGTTCCC TTG GGGAACGGCGTG         TTTTTCTATACTGGA 100 27
 JR441_02535  501103 ..  501117 +  -7.1   -5.1383   TGAGTCATAAAAAAA               GAGCC TAGCC GGCTC               TTTTTATGTATTGTT  90 31
 JR441_02550  502656 ..  502667 +  -5.8  -3.50466   TGAAAATAAGTAGGC                TGGG AATG CCCA                 TTACTTGGTATTTTT  57 144
 JR441_02560  504122 ..  504143 +  -7.3  -5.08169   TCTAATGAAGAAGGA           CACTGCC GGTAAAAG GGCAGTG            TTTTTTCCCGTATAT  90 36
 JR441_02565  505759 ..  505798 +  -8.6  -2.63073   TCTTGGGAGCGGATG  GAGCAGCAG-CCGGCATAT TCG AGATGCCGATCTGCTTCTC  ATCTTATTGAAAAAC  68 228
        cshA  507456 ..  507478 +   -15  -5.47159   TTTGATCGATTCAGA           GCCCAAAACA TGA TGTTTTGGGC           TTTTTTATGTTCGCG 100 41
 JR441_02575 NONE
 JR441_02580  509752 ..  509775 + -12.4  -5.75342   TTTGTCATCAATCTG          AAGCGGCGGT TAAT ACCGCCGCTC           TTTTTTTTGCACGCA 100 214
        acpS NONE
 JR441_02595  512010 ..  512028 +  -8.9  -5.63103   CGAAATAACAACAAA             GGCCAAA CATGA TTTGGCC             TTTTTTTCGTTAGAC 100 33
         alr NONE
        endB NONE
        ndoA  514050 ..  514068 +  -8.9  -6.09196   TAGACATATTTGCAG             GTTGCTC AAATA GAGCAAC             TTTTTTTGTTTTCAA 100 38
       rsbRA NONE
        rsbS NONE
        rsbT  515732 ..  515744 +  -7.7  -3.05816   GGAACAGAGATACAA                GCCAT CAA ATGGC                TTCGGTAGGAGGTAA  65 5
        rsbU NONE
 JR441_02635 NONE
        rsbW NONE
        sigB NONE
        rsbX  519012 ..  519031 +  -5.7  -6.08563   GAATAAGAACAAGAA            GAAGCTG AAATAC CGGCTTC             TTTTTTTTATGTGTT  95 43
 JR441_02655  521266 ..  521283 +  -9.9  -5.21709   ATGGTAAAATAAAAG             CACTGCT TACG AGCAGTG              TTTTTTCCTATAGAA 100 29
 JR441_02665  522032 ..  522054 +  -5.6  -3.01745   CTTGACACTGTAAAT           CAAGGCTGAT ATA ATAAGTCTTG           TCTCATTATTCCACA  53 116
 JR441_02670 NONE
 JR441_02675  522208 ..  522220 +  -3.3   -2.8294   GCGTAAGCGGCGCGA                GGGTT CAA ATCCC                TCCTTCTCCGCCATA  44 0
 JR441_02680 NONE
 JR441_02685 NONE
 JR441_02690 NONE
 JR441_02695 NONE
 JR441_02700  522857 ..  522881 + -13.7  -3.00946   TTTGTGACTAAAACT          GACCACTTACT TTA AGTAGGTGGTC          TGATTTGTCCGCAAA 100 101
 JR441_02720 NONE
 JR441_02725  527532 ..  527543 +  -4.4  -5.47821   CCGCGCCGATACTTG                GCTT TTAG AAGC                 TTTTTTTAAGTGGCT  90 479
        cspC  529459 ..  529480 +    -8  -5.77988   AATCGTTTATACAAA           CAGGCTCT TTATAT AGGGCCTG            TTTTTTTATGTCTAT 100 46
 JR441_02755  534315 ..  534340 +  -9.8   -5.4505   CGGCAATATCAAAAA         TACCAAGGGT TTTGAC GCCCTTGGTA          TTTTTTCTTCAAGAA 100 103
 JR441_02765  536883 ..  536908 + -10.6  -5.30686   TACCTAATATTGTTT         GCCATACAAT TATGAC ATTGTATGGC          TTTTTTGTGCGTGTT 100 34
 JR441_02770  538290 ..  538303 +  -2.5  -4.51763   AAAGGATAGGATTGT               TTAAT TTAC ATTAA                TTTGTTATATTGTTA  60 39
 JR441_02775  538934 ..  538952 +  -7.4  -6.62203   AATAAAACAAGATGA             GAAGGCTT TGT GGGCCTTC             TTTTTTTTTTGTTGT 100 78
 JR441_02780  539783 ..  539802 +  -6.5   -5.4505   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTCTTAGGACA  93 93
 JR441_02790  541309 ..  541340 + -15.4  -3.27653   TCTTTCGGTATCCAA      TAATACCAAGGGTA TAAC TGCCCTTGGTATTA       TGTTCTGCTGCACAT 100 95
 JR441_02800  542769 ..  542793 + -11.5  -4.92314   CGATCGCATACAAAA          TACCAAGGGTT GCT GGCCCTTGGTA          TTTTTATACCTTCAT 100 122
 JR441_02810  545356 ..  545375 +  -5.1  -3.99436   CCAGTCCACGATATG            TCTGTTT AGCGAA AAACAGA             ATTTTTTATTTGCTC  61 131
 JR441_02815  545878 ..  545894 + -10.8  -2.52543   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  77 34
 JR441_02830  548142 ..  548167 +  -9.1  -5.24129   TCTGAATCACAGAAA         TACCAAGGG CGTCAAAA CCCTTGGTA          TTTTTTCTGCCAAAA 100 135
 JR441_02840  550478 ..  550497 +  -7.8  -5.21709   TACTTGCAATGTAAA            CAGGCCTC TAAA GAGACCTG             TTTTTTAATATCCAG  93 312
        aseR NONE
 JR441_02850  552809 ..  552839 + -13.4  -5.16841   CAATGTGTTGTTCAA       CAGGTGTCTGCG AGCTGAG TGCAGACACCTG       TTTTTATTAGTCTGA 100 383
 JR441_02860  553753 ..  553774 + -11.7  -5.79595   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG 100 51
 JR441_02870  556583 ..  556614 +  -7.4  -3.65199   TGACGATTCATATTC      TGGAAACCGAATGTG TTT CAC-TTCGGCTTCTA      TTTGAATAGGACATT  67 323
 JR441_02880  557838 ..  557871 + -13.4  -4.20868   GAGGCACGATATCTA     GGAGGAGTAAGATT TGTTCT AATCTTACTCCTTC      TTCTTATTTTGAAGC 100 68
        ydfH NONE
        ydfI  560871 ..  560890 +  -6.5  -5.73563   TGAAAATTGCCCAAA            CGTACAT GCCCGA ATGTACG             TTTTTTTCATTTCAT  93 51
 JR441_02910  563144 ..  563163 +  -7.9  -5.33848   TGTGTAATAGAAAAA            GCAGATC TTTTAT GATCTGC             TTTTTTGCTTATGGT  95 34
 JR441_02935 NONE
 JR441_02940 NONE
 JR441_02945  569811 ..  569839 + -12.6  -5.10163   TACGAAAGTATGTAA        GAACAGTTGCTG CTTGT CAGTAACTGTTC        TTTTATTTTGACATT 100 41
 JR441_02950  570338 ..  570353 +  -7.6  -5.95946   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 44
 JR441_02970  573307 ..  573335 +  -3.9  -4.32857   TAAACAAACGTAGAA       GCTTCGGAATCA AAAAAA TG-TTCCGGGGC        TTTATATTTGAGCAC  64 356
 JR441_02990 NONE
 JR441_02995  575382 ..  575399 +  -3.3  -5.60993   ATTTCTGCGTTATTC             GTCCGGT GTCA GCTGGGC              TTTTTTTATAAAGGA  84 146
 JR441_03000  576015 ..  576032 +  -9.9  -4.18762   CATATAAAGAAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT  86 142
 JR441_03020 NONE
 JR441_03025  583383 ..  583404 + -11.7   -5.1675   GAGTAATCGAGAGAA           GAGTGATGA ATGG TCATCACTC            TTTTTTCATGACTAA 100 35
 JR441_03040  586179 ..  586209 +  -9.9  -4.88918   TAGGGCAGAATTCAT       AAAAAAACCTGAC ATGAC GTCAGGTTTTTTG       TTTTATTTAGAATAA 100 24
 JR441_03050  587891 ..  587917 +  -8.1  -5.80248   ATTTCTATGATCCGG         TACCAAGGG GGAGCAGAA CCCTTGGTA         TTTTTTTATGTATTC 100 40
 JR441_03055  589271 ..  589290 +    -5  -5.95166   AAAAGTGTAAAAAAA            GACACC AGAGCTTG GGTGTC             TTTTTTTTGATTAAG  91 31
 JR441_03060  590620 ..  590646 + -19.6  -3.52918   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTCATTTAAAACTTG 100 32
         fra  593675 ..  593691 +  -2.3  -3.55219   ATGATTACCTTGTTT              CCATT TCACTTC AATGG              TTATATCATGGCCTT  47 181
 JR441_03090  595661 ..  595676 +  -7.5  -5.88197   CTTAAATCAGTAATT              GCCGC CTGACA GCGGC               TTTTTTTATGTTTGG 100 28
 JR441_03095  596425 ..  596444 + -10.8  -5.60864   CTAAATCATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTCTG 100 30
 JR441_03105 NONE
 JR441_03110 NONE
        celB NONE
        gmuD NONE
        gmuR NONE
        gmuE  603114 ..  603132 +  -3.8  -3.50746   GGCAGCATCCGGGGA             GGTGCG ATCATGA CGCATC             CTTTATTTTTAGAGC  52 13
        manA NONE
        gmuG  605192 ..  605231 + -10.8  -2.53911   AATCAGTAATGTACA  ATAAGAAGGTGCTCAAGA AGTT TCTTGAGCACCTTCCCAC   TGGATTAAGCATTCA  77 40
 JR441_03150  606503 ..  606516 +  -3.1  -3.78775   CGCCAATATAAGATA               CTACG CGGG TGTAG                TTTAGTGGTAAAACC  52 36
 JR441_03155  606579 ..  606590 +    -3  -2.61144   TCTCATCACCCGCTC                CATT ATTG AATG                 ATCTTTGAAAACTAA  41 23
 JR441_03160  608356 ..  608381 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 91
 JR441_03165  611421 ..  611438 +  -8.5  -4.49556   ACCTGTTATCTAGTT             TTGAGAG AACA CTCTCAA              TTTGTTTGGTGGCGA  86 58
         rrf NONE
 JR441_03175 NONE
 JR441_03180  611848 ..  611867 +  -5.7  -4.62441   TTTACTGTATCTTCT            GCTTGGT GTCATA GCCAAGC             TTTCTTTATATCGGG  73 87
 JR441_03185 NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD  615590 ..  615614 +  -7.2   -5.1634   TGACTTCTTATCAAA          GTCTCACG AGATAATAG CGTGAGAC          TTTTTATATGTTTGT  90 12
        moaC NONE
 JR441_03220 NONE
       tatAY NONE
        tatC  620211 ..  620233 +  -9.3   -5.3167   AGGATTTAATTTGAA           TCCATTTCT CATTC AGAAATGGA           TTTTCTTTATTTTTG 100 228
       groES  621668 ..  621685 +  -2.7  -3.67597   CGTGAAAGCGACATT             TTAGCTG TTAT TGGCTAA              TTCTTAAATAAACAA  50 8
        groL  623474 ..  623512 + -10.4  -5.19916   TAAGGATCTAAATTA   GAGGTTTTCCATGAGTTT TTT GAACTTTTGGGAAGCCTC   TTTTTTAACTCTTTT 100 136
 JR441_03255 NONE
 JR441_03260  626365 ..  626397 +  -8.5  -5.18371   GTTGATTGATTAAAA      AGCACTTTTGACTTT TTT GATGTCAAAAGTGCG      TTTTCTTTTATAACA 100 32
        gutB  631922 ..  631943 +  -6.6  -3.59252   ATCGCTGAGTGAACA           GGGAGGAT CTTCGT ATTCTCCC            TCTTGTTTACTGGAA  64 33
 JR441_03280 NONE
 JR441_03285  634446 ..  634482 +  -2.4  -5.87996   TTGTAAATCATTGAA   GATGTTTCTTGAAAGTC TTTG GACTTTTGGGGG-CATC    TTTTTTTATTGCTTA  83 35
 JR441_03290  635323 ..  635349 + -14.4  -3.27674   ATAAGTAATACATAG         GAGGCCGCAGCT TTC GGCTGCGGCGTC         ATTTTATCATAAGAT 100 33
 JR441_03295 NONE
 JR441_03300 NONE
 JR441_03305  638190 ..  638215 +    -9  -5.63517   ATCATACAGTGAAAA         GTCCGGAGTG ATCAGA CACTCGGGAC          TTTTTTATTTAGGAG 100 43
        iolT  641247 ..  641270 + -15.4  -4.99134   GGATAATTAAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 35
        walM  643155 ..  643174 +  -6.5   -5.1244   TATATAATCTGGAAA            GCAAGAA GTCACA TTCTTGC             TTTTTCTATTGGTGG  86 47
 JR441_03330  644251 ..  644274 +  -8.8   -5.1675   GATTAACTAATAAAA          ACCACTCGGC ATGA GCTGAGTGGC           TTTTTTAATGGATGA 100 31
        mneS  651419 ..  651437 + -13.2  -5.13521   TGTCAACAATCTGGA             GCTTCCTG TCA CAGGAAGC             TTTTTTGCGTGATTT 100 229
 JR441_03375 NONE
 JR441_03380  653699 ..  653715 +  -4.3  -3.90744   TCGGGTCATGAGGGG              CGGGCGA GTT TCGCGTG              TTGTTTAGAAAGAGA  59 1
 JR441_03385  656046 ..  656075 +  -2.1  -4.04353   AACGGCCTTGCCAAA       GAGGGCGGA-GCGA GCT TCATATCTGTCCTC       GTTTTTTTCTGTGTC  53 113
        guaA  657683 ..  657704 + -10.9  -6.11243   TAACAACGAAAAAAA           CGTCCCTTT TTCA AAAGGGGCG            TTTTTTTTGTTAACT 100 46
 JR441_03395 NONE
 JR441_03400  659770 ..  659791 +  -8.8  -5.03945   TCATAAGTTGAAAAG           CCGTATGT TGCCAT ACATACGG            TTTTTATCATTGTTA 100 41
        pbuG  661472 ..  661491 + -13.6   -5.7946   ATAAGGAATGAAAAA            CCAGCTGC CGGT GCAGCTGG             TTTTTTTGTTGCAAA 100 37
 JR441_03410  662483 ..  662500 + -11.3  -5.71712   GCTTTAATGAAAAAA             CCGGCTA ATCC TAGCCGG              TTTTTTTATGTCACA 100 34
 JR441_03415  662821 ..  662838 +  -5.5  -5.85244   GATATAAAGAGGTGA             GTCTGCT GAAA AGCGGGC              TTTTTTGTTTTGATT  91 46
 JR441_03420 NONE
 JR441_03425  663997 ..  664042 +  -4.1  -5.86976   ACGATACATGTACCA TGCCCGGTTTGTATTGC TTCCTCATAAGT GCAATGCAGAGCGGGTA TTTTTTATTTTCTGA  90 257
        purE NONE
        purK NONE
        purB  667003 ..  667023 +  -3.9  -3.28712   TTTAGGTTTAGCATA            GAAGAAGCT TTT AGCGGCTTC            TTCTAAGCCGCCGCA  48 25
 JR441_03445 NONE
        purS NONE
        purQ NONE
        purL NONE
 JR441_03465  672368 ..  672387 +  -6.4  -4.40003   GAAAAATGACATAAA            GGCAGC GCAGTTCG GCTGCC             TTTCTCTTTCTGCCC  76 46
 JR441_03470 NONE
        purN NONE
        purH NONE
        purD  676903 ..  676922 + -10.7   -5.9218   AATAAGTGAGGAAAA            CCCGCAG ATGAAG CTGCGGG             TTTTTTTATTATGTA 100 36
 JR441_03495  678753 ..  678777 +  -8.7  -4.39571   TGGGCATAAAAAAAA          GCTTGATCA CGTTTTA TGATCAAGC          TTTTCCATTTATCCG  90 7
 JR441_03505 NONE
 JR441_03510 NONE
 JR441_03515  682231 ..  682255 + -13.6  -4.55295   CAAAATAACATAGAA         CCGCCC-TGCC GTTC GGCAAGGGCGG          TTTCTTTATGAAACA 100 33
 JR441_03525 NONE
        pcrA NONE
        ligA NONE
 JR441_03540  690312 ..  690336 + -18.7  -5.09762   ATGACTGATAGAAAA          CCCTTGTGCCA TAT TGGCACAAGGG          TTTTTATGTTACAAT 100 33
 JR441_03545  691486 ..  691511 + -13.4  -4.53163   GTGTAGATAGAAAAA         GCCAATGGGA ATCCAG TCCCATTGGC          TTTTATAATGTATCA 100 35
        gatC  694507 ..  694520 +  -2.4  -3.01162   CTGGACTAAAGGAGG               GACA CAAGAA TGTC                ATTATTTGATCATAA  42 32
        gatA NONE
        gatB  697425 ..  697442 +  -8.4  -4.98857   AACGCTAATAAAAAA             GCAGCC CTTAGA GGCTGC              TTTTTATGGTTAAAT  95 33
 JR441_03580  701601 ..  701619 + -12.4  -4.54477   AGTAAAAAACAAAAA             GCCTCAGC TCT GCTGGGGC             TTTTGTGCGTTTTCA 100 36
 JR441_03585  702682 ..  702726 + -16.1  -4.12902   AGCCAAGCTCAGAAT GTTGACAAAATCCTAAAAC AGTTTTC GTTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 55
        rlmD  704339 ..  704366 +   -12  -5.39221   CTTAAACTTAGAGAA        GGCAACTAACCC TTGG GGGTTGGGTGCC         TTTTTTGATTGTTAT 100 17
 JR441_03620  709681 ..  709691 +    -4  -3.48024   CTTTTTCTTTTTTGT                 TCAA GAG TTGA                 TCTTTGCTGATAACA  52 59
 JR441_03625  710661 ..  710675 +  -5.7  -4.61482   ATAGAATGACAAAGA               CCCTT GGATA AAGGG               TTCTTTTTTACGAAG  73 54
        rapH NONE
        phrH  712078 ..  712092 +  -7.1  -5.24551   AGTGATCAGAAGAAA               GCCCT TAGCT AGGGC               TTTTTCTTGCTTTAC  90 14
 JR441_03640  712976 ..  712994 +  -8.8  -5.67063   GTGAGTAAGGAGTGA             GCAGGCTG TTA TGGCCTGC             TTTTTTTGTCCTGGA 100 33
 JR441_03645  713528 ..  713550 + -13.5   -3.9461   AGAAGATGCTAGAAA           GACCTTCGG CGCTT CCGAAGGTC           TTCTTATTGAAAAAG 100 41
       cotJA NONE
       cotJB NONE
       cotJC  714785 ..  714800 +  -4.7  -3.41229   AAAATGGTCTGTTTT              TGCAG TTTGGT CTGCA               TTATAATCAAGGTGT  55 85
 JR441_03665  715393 ..  715410 +  -3.3  -5.65678   ATTACGGCAGAATAA             GCGTCCT TTGC AGGGGGC              TTTTTTGTCTTTTCT  84 26
 JR441_03675 NONE
        yesM NONE
        yesN  719272 ..  719304 +  -4.2  -5.58209   GAATTCAGAAGAAAA     CAGGGAGGCGCT-TCC GCA GGATAGC-CATCTCTG     TTTTTTTGACTTTCG  84 2
 JR441_03690 NONE
 JR441_03695 NONE
 JR441_03700 NONE
        yesR NONE
        yesS NONE
 JR441_03715 NONE
 JR441_03720 NONE
 JR441_03725 NONE
 JR441_03730 NONE
 JR441_03735 NONE
 JR441_03740 NONE
        yesZ  734417 ..  734440 +  -6.8  -5.36441   AATTTGACAATCCCA          GCTGATTC TTTGCATC GAATCAGC           TTTTTTCTATGGAGG  91 21
 JR441_03750 NONE
 JR441_03755 NONE
 JR441_03760 NONE
 JR441_03765 NONE
 JR441_03770  741931 ..  741943 +  -5.5  -2.71712   CCATGCAACGTTGAG                CGGAG CTT TTCCG                GTTTAGAAAAGAAAC  51 27
 JR441_03775  742713 ..  742732 +  -8.6   -5.2204   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 39
 JR441_03795  745195 ..  745230 + -15.6  -4.98531   AATAGGAAGTTTCCA    GGCATATGATTGTCCG TCAC CGGGTGATCATATGCC     TTTTTGATTTGAACA 100 36
 JR441_03800 NONE
 JR441_03805  746268 ..  746287 +   -10  -5.81412   TGATTAATGAAAAAG            CGCCTGTC ATTG GATAGGCG             TTTTTTTTCCATACA 100 34
 JR441_03815  748340 ..  748363 +  -8.3    -5.093   GGTTATCTAAAGAAA          GAGAGAATA CTGAAA TATTCTCTC           TTTTATTATTTTCAA 100 50
        cypD  753056 ..  753073 +  -9.9  -4.84363   GTCAACAATCTGGAA             GACTGGA GACA TCCAGTC              TTTTTAGTCCTTTCG 100 288
       ltaS1  755422 ..  755458 + -15.9  -5.68023   AAATAAGATGAAAAA    GAGCCTTGAGCGGGCGT ATT GCCTTCGCTCAAGGCTC    TTTTTTTGGTTATAC 100 35
 JR441_03835 NONE
 JR441_03840 NONE
 JR441_03845 NONE
 JR441_03850 NONE
 JR441_03855  760471 ..  760490 +   -15  -5.07567   GCTGGATTAAAAAAC            CCCCTGCC GCCT GGCAGGGG             TTTTTTCAGCTATGC 100 31
        yfmT NONE
 JR441_03880  766600 ..  766635 + -18.4  -2.84732   AGCGCTTGAGGAAGA    GTAAGAGACCGGGGAC AAAT GTCCCCGGTCTTTTTC     TATCCTGCATTTCCA 100 22
 JR441_03885  768630 ..  768651 + -10.8  -5.44721   CTGGAAAGCTAAAAA           GCGTGGCC GCAGCA GGCCGCGC            TTTTTTTCACATAAT 100 29
 JR441_03890  769210 ..  769233 +  -3.1  -5.80727   AACAGGAAAGTGAAA          GACGGGT-GC TTTAT GCTGCTCGTC          TTTTTTATTGTTTTT  88 40
 JR441_03895  769756 ..  769771 +  -5.4  -4.72007   GAAAAGTTTGTTAAA              CGCTAT TTTT GTAGCG               TTTCTTTTAATGGAA  75 39
 JR441_03900  771007 ..  771028 + -13.1  -5.55664   GCATTAATAACGAAA           GACACTGCA CAGA TGCAGTGTC            TTTTTTTAATCGTGG 100 34
 JR441_03915  774433 ..  774445 +  -6.2  -5.88565   ACGAAATAAAAAGGA                GGGC GGAAA GCCC                TTTTTTTGTTGTAAA  93 32
 JR441_03920  774959 ..  774977 + -11.7   -2.5497   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT  80 44
 JR441_03955  781030 ..  781055 + -16.3  -5.46629   AAAGCAGGGAAAAAA         CCAAAAGGCCA GTGT TGGCCTTTTGG          TTTTTTTGCGGTCTT 100 39
 JR441_03960  782482 ..  782504 +  -9.2  -5.32565   TAAGAAAGTGAAAAA           CACAAAGGGT GCT AACCTTTGTG           TTTTTTAATTAATTA 100 38
 JR441_03965  784033 ..  784067 + -13.8  -4.23892   CTAGGAATATGGTAG     AAAGAAAAAGGCAGAC GCG GTCTGCCTTTTTTTTA     TTTTCACTCCTTCGC 100 26
        yflR NONE
        citT NONE
 JR441_03980  787405 ..  787420 + -10.4  -5.52384   GACAGGAAATTAAGA              TCCCGG CATC CCGGGA               TTTTTTTCATGCCGA 100 28
        citM  788950 ..  788962 +  -2.7     -2.89   AACATTCCGGAGGTG                TCATT ATG AGTGA                TCCTTATATGCCGCT  42 76
 JR441_03990  789750 ..  789768 + -11.7  -5.77677   TTATCGTCTATTTGA             CACCCGC ATTAC GCGGGTG             TTTTTTATTGTTTTC 100 26
 JR441_03995  791107 ..  791118 +  -5.8  -4.56597   AAAATCTCGACACGC                CCGT CATC ACGG                 TTTTTGACCCAGCCG  72 173
 JR441_04005  791964 ..  791987 + -11.7    -3.695   GTTGAATAGAAAAAA          GCCGCGCAT ATCAAC GTGCGCGGC           TTTGCCATATTTAAG  91 32
 JR441_04030  795235 ..  795256 + -15.9  -5.42164   CTGTCAAATAAAAAA           GCGGAGAGG TTGC CCTCTCCGC            TTTTTCTTATTTATC 100 30
 JR441_04040 NONE
 JR441_04045  797877 ..  797901 + -11.5   -5.0916   TTTGTCTTGTCTGCA          GGATGGCGATT GAT AATAGCCATCC          TTTTTATGTTCCAAG 100 41
 JR441_04050  799860 ..  799872 +  -3.3  -3.53012   AATGGTGTATTTTAG                CGGGA CGC TCCGG                TTTGAGAAGAGAAGC  50 484
        treP  804996 ..  805031 +  -4.7  -4.36595   AACATAAATAACAAG    TGGGGAGCGGG-ACGT GTTGA ACGTTCCCTTTTCCCG    TTTTCAATTTAAATA  68 30
        treC NONE
        treR  807493 ..  807514 + -12.3  -5.69793   GGGGAAATGAGAGAG           GCGC-CTGCC TGC GGCAGCGCGC           TTTTTTGTTTGGTAT 100 31
 JR441_04090  808300 ..  808324 + -14.3  -5.64274   GGGTTTAAATAAAGA          AAGCTGCTCGC TTA GCGAGCAGCTC          TTTTTTTATGCCTGA 100 33
        yfkM  813487 ..  813506 +   -15  -5.87996   AGAAATAAGAAAAAA            CGGACGCC CACG GGCGTCCG             TTTTTTTGTTGCTTA 100 33
 JR441_04115 NONE
 JR441_04120 NONE
 JR441_04125  817063 ..  817087 + -16.5   -4.8622   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 192
         cax NONE
 JR441_04140  820367 ..  820387 +  -9.8  -6.32017   AAGATAAATAAAAAA            CTGATTCC AACTC GGAATCAG            TTTTTTTTGTTTATT 100 34
 JR441_04155  822695 ..  822711 +  -6.5  -5.80364   AGATTGGGAATAAAA              CCGCG CGCCCGC CGCGG              TTTTTTTATTGGCAT  93 28
        pdaA  823589 ..  823620 +  -9.5  -4.66535   CGTCTTTGTAAAAGA      GAAAGACCTCTCC TTAAAC GGAGAGGCTTTTC       TTTATTTTAAACATT  91 30
 JR441_04175  826589 ..  826609 +  -9.8  -3.01726   GAAAAAACCATTTCA            CTTTCTGC CATCT GCAGAAAG            CTTTATATAGAAACG  76 92
        rlmD  828047 ..  828088 +  -5.1   -4.7497   ATTAATTCCTAATCA GATCTGGATTTCGGCAG AATGAACA TTGCCGATTTCCGGGTC  TTTTTCGTGCATAGC  74 36
 JR441_04185  828983 ..  829006 +  -7.5  -3.89837   TATCTTATGAGTGAA          GACTGC-GAC ACTTA GTCAGCAGTC          TATTTTATGGTTCTG  74 97
 JR441_04190  830685 ..  830711 +  -5.9  -5.24129   AATTCTTGACTAAAA         TACCTGGATTT TCGGT AAATCCGGGTC         TTTTTTGTACGCAGC  83 72
 JR441_04195  831462 ..  831480 +  -8.8  -5.82316   TCGATCATTGTCAAA             GGCCGGGT GAT ATCCGGTC             TTTTTTTTGCATGCT 100 223
        acoA NONE
        acoB  833664 ..  833678 +  -4.2  -2.52464   TCACGCTTGAATTGC               TTGGCG AGC CGGCAA               TGAATTAAAGGGGGA  47 3
        acoC NONE
        acoL  836305 ..  836331 +  -9.4  -5.64873   ATAATAAAGGAAAAA         GCAGGCGCAT GGATATA AGGCGCCTGC         TTTTTTATTGTTGAA 100 37
        acoR NONE
 JR441_04225  838467 ..  838489 +   -12  -4.77165   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 33
 JR441_04260 NONE
 JR441_04265 NONE
        malP  846468 ..  846487 +   -10  -6.02919   AAATTATTTTATCTT            GCGCTGTT TAAA GACAGCGC             TTTTTTTGTTTGTCA 100 44
 JR441_04275  848923 ..  848960 + -13.7  -4.48175   ATTAAAATGTACAGA   TTCTAAATAGAGTGCTT AACA ATGCACTCTATTTAGAG    TTTTAATTAGATTTT 100 42
 JR441_04280 NONE
 JR441_04285  852850 ..  852872 +  -8.5   -5.4756   CCAATTTGAGAAATA           GACCTTTGT CCTGC ACAGAGGTC           TTTTTTGTTACAGTT 100 25
        catD NONE
        catE  854290 ..  854317 + -14.9  -5.79595   GTGATTTAACTGCAA        TCCCCTTGCCG AAAAAA CGGCAGGGGGA         TTTTTTATTTTCCAG 100 32
        lnrJ NONE
        lnrK  856296 ..  856310 +  -7.1  -5.52986   ACGCTTCTCTGAAAA               GGCCT TTTAC AGGCC               TTTTTTTCATGCCCT 100 60
        lnrL NONE
        lnrM NONE
        lnrN  859718 ..  859738 + -11.2  -5.50499   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 30
 JR441_04335  862522 ..  862543 + -13.7  -3.34905   CAGGGTGAAAAACAA           GCGGCAGGG GGGC TCCTGCCGC            GTTTCTTTACTTCTC 100 33
        bstA  865160 ..  865172 +  -2.6  -4.27316   CTCGCATGAATGGCG                TCGC TTATC GCGG                TTTTGACTTCAGGAA  58 140
        mprF  869922 ..  869945 + -15.4  -6.25578   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTTATTTCGT 100 14
 JR441_04375  872051 ..  872068 +  -4.1  -4.20696   TCGCAAGAAGGGGGG             CGAAGCT ATGA AACTTCG              TTTTGGCGTTACTGC  61 15
 JR441_04380  873098 ..  873124 + -12.5  -5.55664   TTCTTAATCGTTACA         CCCATTTTCTT AAAAA AAGAAAATGGG         TTTTTTTGATAATGA 100 34
 JR441_04385  874122 ..  874141 +  -6.6  -3.13906   AAGATGCACTTTCCG            TTATCATT ATGA AATGATAA             TCATTTTCAATTGCA  61 61
 JR441_04390  874763 ..  874789 + -16.7   -4.8622   CTGAAATGTAAAAAG         CCCCTTGTCTC AAACG GAGACAAGGGG         TTTTTCATTAACGAG 100 30
        recX NONE
 JR441_04415  877342 ..  877360 + -13.2  -5.27335   TTAAAGCGTAACGGG             GAGGCTGA TGA TCAGCCTC             TTTTTGTTTGCAGCA 100 37
 JR441_04420  878671 ..  878691 + -11.2   -4.1023   AATAAAGGGTAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT  89 29
 JR441_04430  879249 ..  879270 + -10.1  -5.52347   CTTTTGCATTAAAAA           CCTGCCGTT AACG ACCGGCAGG            TTTTTTCATTTTCTT 100 29
 JR441_04435  879912 ..  879929 +  -5.5  -4.71061   CAAATGCGATAAAAA             GGCAGGC CGAG GCTTGTC              TTTTTGCCTATGCAT  73 29
        spdL NONE
        ephM  881193 ..  881211 +  -9.6  -5.01546   AATTTCTCTCCATCC             GTCTGTCA TAA TGGCAGAC             TTTTTCTGTGCGTTT 100 46
 JR441_04450  882404 ..  882415 +  -2.2  -3.51573   ACTGAAAATACCAAG                C-GCC ATT GGCAG                TGCTTTTTTTGCGTG  47 36
 JR441_04455  885030 ..  885063 +  -8.1  -5.28826   TTTTATATAAGACGT     AAAAAGCCCGGCTCT ATAT AGAGCCGAGCTTTAA      TTTTTTCTGAAGTTT 100 5
        mutY  887414 ..  887424 +  -2.4  -3.38162   TCATTGCGCTTCATT                 CCGC CGC GCGC                 TTCAATTTCTTGCGT  45 88
        fabL NONE
 JR441_04480  888759 ..  888783 +  -5.8  -5.56264   CTGAAACAGAAAAAA         GCACTT-CATC TTCG GGTGGAAGTGC          TTTTTTCTGTTTGGA  91 44
 JR441_04485  889183 ..  889208 +    -9  -5.24291   GTGTAGTGCAGGAAT         GTGCCATTCC CCGGCC GGAATGGCTC          TTTTATTTTCATTTT 100 35
 JR441_04490  889862 ..  889882 +  -6.9  -4.62336   ATGGTTACGTAAAAA            CCTGTTG CGGGGTA CAACAGG            TTTTTCACATGGGCT  81 40
 JR441_04495  891685 ..  891714 + -11.7  -5.76633   GAACTAAAACATCAA       TCTTATATCCTTT TAAC GAAGGATATAAGA        TTTTTTTGTGTATAA 100 34
         bcp  894957 ..  894970 +  -3.1  -3.09286   AAAAGTAAATCTCTA               TGAGC CTAT GCTTA                CTTTTACCCTGATAT  45 33
        perR  895508 ..  895546 + -13.4  -3.87694   AAAAAGAAAATCATT   AAAAATAAGCTGACCG CACGAAA CGGTCAGCTTATTTTA   TTTCGATATTTTCTT 100 24
 JR441_04525  897070 ..  897089 +  -2.2  -2.65751   TAAATCAAAAAAACA            TTTGAC AAAAGAAA GTCAAA             ATGTTATATTAATAA  40 106
 JR441_04530  898897 ..  898922 + -11.3  -2.72371   TCCCTGTCTTGTTTA         GTTTTGAAGGA TCAT TCCTTCGAAAC          GTGTTCTTTGAAAAC  78 91
 JR441_04535 NONE
         rrf NONE
 JR441_04545 NONE
 JR441_04550 NONE
 JR441_04555 NONE
 JR441_04560 NONE
 JR441_04565 NONE
 JR441_04570 NONE
 JR441_04575 NONE
 JR441_04580  902881 ..  902891 +  -2.6  -3.83026   CTCTTGCCGGCACTG                 TTTT TTC AAAA                 TTTAATGTGGAGGGG  52 27
 JR441_04585 NONE
 JR441_04590 NONE
 JR441_04595 NONE
 JR441_04600  903264 ..  903276 +  -2.7  -3.09933   ACTTTTTATATCAAC                TGCAT ATA ATGTA                TTAAGTCCATTAAAA  43 42
 JR441_04605 NONE
 JR441_04610 NONE
 JR441_04615  903604 ..  903623 +  -9.4    -5.243   AACTAATCATATTAA            TGATCTAC ATAA GTAGATCA             TTTTTTAATGCTTTG 100 89
 JR441_04620  903897 ..  903918 + -13.1  -5.84011   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGAAACGGG            TTTTTATTTTTTATT 100 36
 JR441_04630  905091 ..  905122 +   -16  -5.00846   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTA 100 30
        thiC  908255 ..  908280 + -14.9  -5.40072   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTAGAAAAAC 100 32
        senS  910082 ..  910099 + -12.7  -4.84529   CTAAATAGAAAAAAA             CCCGCTG ATTA CAGCGGG              TTTTTGCATTTCTAC 100 33
 JR441_04665 NONE
 JR441_04670 NONE
 JR441_04675 NONE
        ssuD NONE
 JR441_04685  916382 ..  916398 +  -7.9  -3.63744   TGCATCATTAGAATG              GGCGGCT TCA GGCCGTC              TGTTTTACAAAGCGG  69 30
        rpsN  916768 ..  916793 +  -9.7  -5.85011   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 33
 JR441_04705  917736 ..  917772 + -10.3  -5.71712   TACATACGTTATTAA    CGCAGTGTTTCGTTTCT CAG ATAAACGAAGTATTGCG    TTTTTTTATGTAAAA 100 40
        queG  919704 ..  919723 +  -5.8   -5.4251   AGCAGAAGGAAAAAA            CACTTGAGA TCA TC-CAAGTG            TTTTTTCTCTATAAA  89 52
 JR441_04720 NONE
        trmL  921208 ..  921230 + -15.6  -5.42862   AAAATAGTGAAAAAA           CCCGCTCATC GAT GATGGGCGGG           TTTTTTTACGGATGT 100 34
 JR441_04730  922014 ..  922029 +  -2.6  -3.14132   TCAAAGGGAGGAACA              TTTCAA TCTG TTGAGA               TTAATGGCAGCGGGA  45 73
 JR441_04740  923412 ..  923433 + -12.3  -5.77677   TCTGTTATACAAAAA           GGGTGCTCT TTCA GGAGCACCC            TTTTTTATTCTTTTC 100 49
        prkA  925640 ..  925664 +   -10  -4.46581   AACCGATAAACAACG          TGACCCGTCC GAATA GGGCGGGTTA          TTTTGTCCCATTTTC  91 32
        yhbH  926998 ..  927011 +  -5.2  -6.25578   TTTTCGTAATGAAAA               GCCC ATTTCA GGGC                TTTTTTTTATTTAAT 100 32
 JR441_04755 NONE
 JR441_04760 NONE
 JR441_04765 NONE
 JR441_04770 NONE
 JR441_04775 NONE
 JR441_04780 NONE
 JR441_04785 NONE
 JR441_04790 NONE
 JR441_04795 NONE
 JR441_04800 NONE
 JR441_04805  934761 ..  934784 +   -14    -5.252   AAACTAATAAAAAAA          GCTGTTTTGC TTAT GCAAAACAGC           TTTTTTGTCAAAATA 100 34
 JR441_04815  936295 ..  936321 + -11.8  -5.93809   TCTTTCAGATTGGAA         GAATGAATTCGA ACA TTGAATTCATTC         TTTTTTTTCTGAAAA 100 7
 JR441_04825  938969 ..  938993 +   -13  -5.40072   CGTAACATATGAAAA          CGTGTAATCC CAACA GGATTACACG          TTTTTTTAACGGCCG 100 36
 JR441_04835  940174 ..  940192 + -14.6  -5.33026   GAATAAATAAAAAAA             GCCGCACA ATT TGTGCGGC             TTTTTCTTTGCGTTA 100 35
 JR441_04840  941510 ..  941539 +  -8.6  -2.87957   TGAACAGGTTTTTTA       GGCTG-TGACGGC TGCAT GCCGTAAACAGCC       TGGTTGTCCTCCTTC  69 282
        yhcR NONE
 JR441_04855  946180 ..  946199 +   -10  -4.71426   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 29
 JR441_04865  947633 ..  947658 +  -8.4  -5.36441   ATAATCATGCGGGAA         GGGCTTTTCT ATTTTC AGAAAAGCTC          TTTTTTGTATCAGAG 100 37
 JR441_04870  948189 ..  948209 + -11.9   -4.1822   TTCATTAATAAGAAA            GAGCTTGCA GTG TGCAGGCTC            TTTCTTCACATAAAG  93 33
 JR441_04875 NONE
 JR441_04880  950540 ..  950557 +  -9.8  -5.00616   ATAATCCCCAAAAAA             CCCGCC TGAATT GGCGGG              TTTTTTAAAACAAAA 100 37
 JR441_04885 NONE
        glpP  953002 ..  953012 +  -4.6  -4.46576   CAAATGTTTATGCAC                 CCGT AAA GCGG                 TTTGTTGTGGTTTTT  66 123
        glpF NONE
        glpK  955472 ..  955520 + -21.4  -5.19879   GTCCTGAGATGAGGA GAGACCACAGCA-CCAAAGTGTA AGCA TGCACTTTGGCTGTTGTGGTCTC TTTTTCTATTTACCG 100 81
 JR441_04905  957229 ..  957252 + -11.8  -4.89063   TTGAGCAATAAATCA          TAACGGGCTG TCTG CAGCCTGTTA           TTTCTTTTTACGTGC 100 30
        pgcA  959113 ..  959137 + -11.5  -5.56263   ATAATTCAAGTATGA          GCTGGGTCATT GTA AATGATCCGGC          TTTTTCTTTTCTCAT 100 37
        yhcY NONE
        yhcZ NONE
        yhdA  961541 ..  961562 + -15.9  -4.62441   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 13
 JR441_04935  962342 ..  962366 +  -5.6  -4.55887   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA  73 33
       spoVR  967645 ..  967664 + -12.2  -5.46706   TATTTATAAAAAAGA            GGATGCAG CGTT CTGCATCC             TTTTTATTTTCCAGT 100 32
        lytE  970599 ..  970616 + -11.3   -5.7946   TAATTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTATTAGACG 100 38
        citA  972717 ..  972727 +  -5.4  -2.99972   AATATACCGGTGCCA                 TTCC CGA GGAA                 ATTCTTTCATAACAT  53 3
 JR441_04980  973695 ..  973710 +    -9  -5.74122   GTGATCAACGAAAAA              CCAGCT CTAG AGCTGG               TTTTTTTGTGTGGTA 100 37
        bcaP  975343 ..  975366 + -10.3  -4.79752   TAACCTTTTGATAAA          GAGAGCGGCC ATACA GGCCGC-CTC          TTTTCTGTTCTTGGC 100 38
 JR441_04990  976808 ..  976829 +  -9.4  -5.68438   TATCATTTTAAAAAA           CAGGCTCC GTTTCA GGGGCCTG            TTTTTTATTTAATAA 100 30
 JR441_05000  978794 ..  978811 + -11.3  -5.00616   GTGTAATGAAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 35
        akrN  981849 ..  981868 +   -10   -4.7416   GGAAATATAACAAAA            GCTGAGGG CGAA TCCTCAGC             TTTTTGGCGTTTTAA 100 31
 JR441_05025  982611 ..  982644 + -18.5  -3.54743   CCTGAACTGTGAAAA     TAAGAAAAGCACCTT ATAC AAGGTGCTTTTCTTA      TTATGCTTCCTGCTG 100 59
 JR441_05040  985824 ..  985848 +  -8.7  -4.96848   AGTAGGCAAAGAAAA          GAAAACAGTTT TCA AGGCTGTTTTC          TTTTTATATCCACAA 100 40
 JR441_05045  987505 ..  987529 +  -7.2  -5.55698   TGCTGAACAGTGCAA          CCTTGAGC GAGAAATAA GCTCAAGG          TTTTTTTACATTGTG 100 9
 JR441_05065  989385 ..  989403 + -17.4  -4.46212   TGAATTGAGAAATGA             CCCCGGCG TTT CGCCGGGG             TTTTGTGCTGCAAAA 100 68
        mscY  990613 ..  990637 +  -8.6  -4.77036   CGGGCTTAAAAGAGA          GACTTCGTCT GACAG AGGCGGAGTC          TTTTTCATGGTAAAA 100 32
        srtN  991416 ..  991438 +  -9.1   -5.5112   TTTGGGCATAAAAAA           GTGAGCCGC CTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 22
         dat  993439 ..  993463 +  -7.9  -5.75538   AATGAACGAAGAAAA         GAGC-CCGCT TTATAC AGCGGAGCTC          TTTTTATTTTTTAAC 100 40
 JR441_05100 NONE
        bmrC NONE
        bmrD  999687 ..  999708 + -11.7  -5.07011   ATAATGCTCAAAAAA           CCCAAAACA ATTG TGTTTTGGG            TTTTTGGTTTATGTA 100 37
 JR441_05145 1005323 .. 1005337 +    -5  -3.51785   GCAATGATGAAAGGA               GCTATT TAC AATGGC               TGTTAATTTTTATGA  57 108
 JR441_05150 1005696 .. 1005717 + -11.7   -5.5604   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCATTCA 100 35
 JR441_05160 1008160 .. 1008188 + -13.9  -5.03145   AACGTGTGTAAAAAA       GCCGCTCGCACC CTGACA GGTGCG-GCGGC        TTTTTTGCCGGATTG 100 30
 JR441_05165 1009763 .. 1009784 + -14.5  -5.65177   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 16
 JR441_05185 1012853 .. 1012895 + -12.3  -2.54896   AAGCGTAACAGATCA GCCGGAAAGCTGATCATCTGT GAA ACAAA--ATCAGCTTTCCGGC TGCATTGACTAAACG  82 33
 JR441_05195 NONE
 JR441_05200 1015335 .. 1015356 + -12.3  -4.67607   AAACTGATTGGAAAA           CAGCCTGGG GATT CTCAGGCTG            TTTCTTTATTGACAG 100 34
 JR441_05205 1016661 .. 1016671 +  -2.4  -3.63305   TGCTTGATACATGAG                 GCGG TGA CAGC                 TTTGCGAATTATATC  47 27
        sbcE 1019531 .. 1019547 +  -5.2  -2.78463   TGCATTTCATAGCAG              CCAAAT CATCC ATTTGG              TGTCATAAAAGAGGT  50 1
        yhaM 1020582 .. 1020611 + -11.6  -4.76644   TAAATAACTTAAAAA       GGACTGATGCTGA CATAT TCAGC-TCAGTCC       TTTTTGATGCGTCTT 100 34
        yhaL 1020916 .. 1020943 + -16.4  -5.72254   CATCGCATAAAAAAA        GCTGTGC-GGCTC AAT GAGCCTGCACAGC        TTTTTTATTATTTAG 100 31
       yhzE1 1022082 .. 1022106 + -10.8  -4.68908   TACTAAGCAGCCCGA          GGATCGCTTG CAACA TAAGCGATCC          TTTATTTTCACTAGC  95 35
       yhzE2 1022297 .. 1022323 + -15.3  -4.59293   AATCAACATAAAAAA         GCATAGCTGCT TAATC AGCAGCTATGC         TTTCTTTCGTATTTA 100 39
 JR441_05250 1023830 .. 1023845 +  -6.8  -2.79302   TTTCCATAAAATCAT              CGCCGT AGAT ATGGCG               TATCATACACATCAT  55 162
 JR441_05265 1025195 .. 1025216 + -10.1  -4.53705   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT  91 64
        ecsA NONE
        ecsB NONE
 JR441_05295 1030702 .. 1030727 + -11.9  -5.64274   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA 100 12
 JR441_05320 NONE
        hemE NONE
        hemH NONE
        hemY 1040197 .. 1040216 + -10.7  -5.63374   TTTATTCAGCTAAAA            CCTCCGC TTTATC GCGGAGG             TTTTTTTGATGTTCA 100 28
 JR441_05340 1040899 .. 1040923 +  -4.4  -4.32857   TTGTATGTTGTCAAA         GGATTGTC-AG CGAA CTAGATAATCC          TTTCTCTTTGCAAGA  63 8
 JR441_05345 1043322 .. 1043347 + -13.5  -5.83226   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATT 100 33
 JR441_05355 1045304 .. 1045318 +  -7.2  -3.24021   ATTAAGCATGGGTCA               TCAGAA TAT TTCTGA               TTCAGTCTTTAGCAA  63 93
 JR441_05360 NONE
 JR441_05365 NONE
 JR441_05370 1047114 .. 1047139 + -17.6   -4.4078   TTAAAGATTAAAAAA         GCCTGCGGGG CAAGAA CCCCGCAGGC          TTTTCATTAACCAGA 100 30
 JR441_05385 1049735 .. 1049745 +  -2.4  -2.77135   TGTGGGAAGGATAAA                 GGAG GAG CACC                 ATGTTATTTATAGAC  41 27
 JR441_05390 NONE
 JR441_05395 1051460 .. 1051485 +  -6.2  -5.90231   CTATGACAGTACTGA         CACTC-AGGGC TTTTT GCTCTTGAGTG         TTTTTTTCTGTTTCT  93 35
        lcfB 1053112 .. 1053144 +   -18  -4.26079   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 28
 JR441_05410 1054976 .. 1055001 +  -9.1  -4.93316   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 29
 JR441_05420 NONE
 JR441_05425 1058113 .. 1058142 + -15.2  -5.24129   GCTTTAACAGGATCA       GCTTGCAGAGAA TGTTAT TTCTCTGCAAGC        TTTTTTGTGGACAGG 100 34
 JR441_05430 1059300 .. 1059317 + -11.3  -5.39905   AGAAATAAAAGAAAA             GACAGGC AAAC GCCTGTC              TTTTTCTTATTTGAT 100 33
 JR441_05465 1067150 .. 1067170 + -14.1  -3.71888   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 32
        comK 1068287 .. 1068311 + -11.4  -3.74251   TTAGAAAAATAGGAA          GGAGCTGACC GAACA GGGCAGCTCC          TTTCATAAAGCTATG  91 37
 JR441_05485 1069709 .. 1069746 + -15.3  -2.71144   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 27
 JR441_05505 NONE
        lepB 1073355 .. 1073372 +  -7.1  -2.51393   GAGCTATAATCAAAA             TTGTTAC CTAC GTAACAA              AATTTATATATTTTT  60 111
 JR441_05515 1074951 .. 1074961 +    -4  -3.88498   CAGCCGAATATAATT                 CAAT TCG ATTG                 TTTCATCTGTAACAA  56 28
 JR441_05520 1075549 .. 1075582 +  -7.5  -5.53079   CCCGAGCATTTTTAA     ATAAAAAACACGCAC TGCG GTGCGTGTTTTTCGC      TTTTTTCTATCTTTT 100 22
        ntdR 1081456 .. 1081482 +    -3  -5.44119   TTTCCCCATCTCGAT         GGTTTGCGAATT AAA AGTTCTTGAACC         TTTTTTTCAACTAGG  77 202
 JR441_05560 1085804 .. 1085825 + -10.2   -5.0538   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 29
        addB NONE
        addA NONE
 JR441_05585 NONE
        sbcC NONE
        hlpB 1099040 .. 1099066 +  -8.8  -4.51196   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA  90 33
 JR441_05640 1103735 .. 1103756 +  -4.3  -5.32882   GCTGAATAAAACTGG           AGGGCGG ACCCGGAC CCGCCCG            TTTTTTCTGATAATC  81 36
 JR441_05645 1104213 .. 1104235 +  -7.7  -4.96657   AGAAAAACCTATGAA           CCCGGCTCT TTGAT AGAGTTGGG           TTTTCTTATATTTAT  89 42
        wprA 1107056 .. 1107074 + -11.7  -5.63517   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 33
        asnB 1109702 .. 1109738 +  -6.1  -5.24129   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  83 77
        farP 1111322 .. 1111342 +  -6.8  -3.03243   GATATCTAAAAAACA            CCCGGC CTTGATTGA GCCGGG            TGTTACGCCATACCT  60 32
 JR441_05680 NONE
        degA 1114732 .. 1114747 + -10.4  -5.32944   CGCTCAACACATGAG              CCCGCT AATG AGCGGG               TTTTTTCATTATGAC 100 27
        iolX 1116002 .. 1116023 +  -5.8  -4.52142   CTTTCCACAAAAAAA           GCAAGGAC ATTTTA GCCCTTGC            TTTCTCTTTTCTCAT  73 87
 JR441_05705 1119143 .. 1119156 +  -5.9  -3.76402   TGTGAATGACAGCCC               CGCTG AAAT CGGCG                TTTGATAAATCACAT  61 413
 JR441_05715 1120421 .. 1120436 +  -6.1  -5.42131   ACTCATAAGAATAAA              CCCGA CATTGA TCGGG               TTTTTTATATAATTC  89 33
 JR441_05735 1123890 .. 1123900 +    -4  -2.55361   CAACGATAGAGAGGG                 TCAT AAT ATGA                 ATGATTTTTCACTAG  45 15
 JR441_05740 1124666 .. 1124696 +  -8.3  -2.96205   TGTAAAATAGCGGCT      GCGG-GGCTCTCGT CGTG AAGAGAGCCTCTGC       CTATTATTTTTTATG  67 36
 JR441_05780 1132970 .. 1133002 + -17.8  -5.76633   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 34
 JR441_05800 NONE
 JR441_05805 NONE
 JR441_05810 1136476 .. 1136499 +  -9.6  -5.40072   AGAGTAGAAAAAGAA          GGGCAGAG CGAAATAT CTCTGCCC           TTTTTTTGGGGAAAA 100 34
        nprB 1138216 .. 1138267 + -24.3  -4.63218   GCTGTCGGCATTCTA TGAGCAAACAAAAACAGTCAGGAC ACAGA GTC-TGACTGTTTTTGTTTGCTCA TTTTCTTAAAAAGAA 100 23
 JR441_05825 1140109 .. 1140127 +  -5.2  -3.45023   TGACGAAAGCAGGTG             GAAGTCGT GAA ACGGCTGC             TTGTGATGCTCCTCC  55 38
 JR441_05830 1140567 .. 1140589 + -17.8  -5.80364   TGAAGTCAAATAAGA           GGCTATGGCG AGT CGCCATAGCC           TTTTTTTATTGCAGT 100 28
 JR441_05850 NONE
 JR441_05855 1143131 .. 1143156 + -11.9  -5.03314   CAATAAAACAAAAGA         GGACAGCCTGA CATG TGAGGCTGTCC          TTTTTTACAGCTGAA 100 35
 JR441_05860 NONE
 JR441_05865 NONE
 JR441_05870 1145380 .. 1145400 + -15.5  -5.61596   TGATGATGATGAAAA            CAGGCTGAC GCG GTCAGCCTG            TTTTTTTATGCGGCT 100 18
 JR441_05875 NONE
        argJ NONE
        argB 1148650 .. 1148666 +  -5.1  -3.91716   GTCAAAGCAAAGGAG              GCTGTTT CAT GAGCAGC              TTGTTTCAAACCTAC  61 14
 JR441_05890 1149800 .. 1149814 +  -3.5  -4.08666   AATCGCTCATCATTC               CGCTG TAAAC CAGTG               ATTTTTTTTCGATAT  57 10
 JR441_05895 NONE
 JR441_05900 NONE
        argF 1154973 .. 1154993 + -11.2  -5.14563   GGAATCATCAAAAAA            CTGCTGAG CCAAA CTCAGCAG            TTTTTTGATGGCAAC 100 19
 JR441_05910 1155255 .. 1155277 + -10.7  -5.30575   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTTGACTTTTTA 100 37
 JR441_05920 1156474 .. 1156497 +  -8.8  -5.07652   AGAATATAATGACAG          CAGCCTTCTC TTTT GCGGAGGCTG           TTTTGTTTTGGGAAA 100 41
 JR441_05925 1157184 .. 1157199 +  -3.2  -3.48981   AAAGGAGTTGAACAT              GACTTG ATCA CAAGGC               TTGTCATGATCTTTT  50 112
         med NONE
        comZ 1158353 .. 1158372 + -10.8  -4.18697   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  90 32
        fabH NONE
        fabF 1160993 .. 1161017 + -17.9  -6.30182   CATAATCAAGCCAAA          CCGGCTGCCCT TAA AGGGTAGCCGG          TTTTTTTTTGTGTGC 100 36
 JR441_05955 NONE
        appD NONE
        appF 1163985 .. 1163996 +  -2.2  -2.96164   GCTCCCAGCCACTTT                GTGG CTTG TCAC                 CTTTATAGCTAATGT  42 2
 JR441_05970 1165741 .. 1165767 +  -7.3  -4.13711   AGTTAAATCCCTAGA         GAGGTGAGGAT TATGC ATCCTTTCCTC         TTTATCCTATTTTAG  73 42
 JR441_05975 NONE
 JR441_05980 1167847 .. 1167859 +  -3.4  -4.84359   TATCCCTTGCCTATA                CTGT GGACA ACAG                TTTTTATAAAAGTGA  67 193
 JR441_05985 1168644 .. 1168663 + -12.2  -5.27477   GTCAACTAAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 32
        oppA 1172074 .. 1172102 + -12.6  -4.24342   AAACAATAACCTCAA        GGTATATGGGGA CCTAT TTCCCATATACC        TTTCTTACTGAGGAA  95 54
        oppB NONE
        oppC NONE
        oppD NONE
        oppF 1176017 .. 1176041 + -15.9  -5.48825   TTCATGATTCATCAA          TCCTTCAAGAG AAT CTCTTGAAGGA          TTTTTTTGCGTCCTC 100 34
 JR441_06020 1177351 .. 1177367 +  -9.4  -4.72272   ACAATTCAAAATGAA              CGGAGC AGCTG GCTCCG              TTTTTGCTGAAAAAA 100 44
 JR441_06025 NONE
         spx 1178664 .. 1178695 + -13.2  -4.60487   AATAGATCGTATCAT      CAAAAGAAGGCTGA GTCA TCAGCCTTCTTTTA       TTTTTCAACCTGCTG 100 39
 JR441_06040 NONE
        mecA 1180287 .. 1180308 + -13.1  -5.93809   TTGCATCATAGCAAA           CCGATTTCC TTCC GGAAATCGG            TTTTTTTTATGCACG 100 30
        coiA 1181657 .. 1181668 +    -3  -3.00145   TGAAAGGCACAAAAG                GAAA GGTT TTTC                 GTGTTTTTACTGCTT  43 88
        pepF 1183662 .. 1183686 + -12.9  -5.01732   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT 100 34
 JR441_06090 NONE
        yjbM NONE
 JR441_06100 NONE
 JR441_06105 1189918 .. 1189940 +   -15  -5.36441   AGAAAACTGATAAAA           GGAGAGAATC ATT GATTCTCTCC           TTTTTTATATGGGGC 100 11
 JR441_06115 1192954 .. 1192977 + -11.8  -6.09196   TATGCCAATTCCAAA          CCACTTTTCC TTGC GGGAAAGTGG           TTTTTTTATTTTCAG 100 221
        tenA NONE
        tenI NONE
        thiO NONE
        thiS NONE
        thiG 1196348 .. 1196362 +  -6.4  -2.87132   AACGGCAAGCAGTCC               GGGAGA AGG TCTTCC               TGTATGACAGGCAGG  58 4
 JR441_06145 NONE
        thiD 1198209 .. 1198233 +   -13  -4.37711   TAAATACAAGCCGAT          GAGATCACCA GCTGA TGGTGATCTC          TTTTGCGTTTGCTAC 100 24
        fabI 1199139 .. 1199159 + -11.2  -5.82036   CAGGATCTATATCAA            GCAATCCC GAATA GGGATTGC            TTTTTTATTTCTTCT 100 42
        cotO 1199921 .. 1199947 + -10.8  -5.08824   ACGAAAAAGAAAAAA         GCTGCCCGGC TGATGTT GCCGGACAGC         TTTTTTACATAGAGA 100 40
        yjcA 1203285 .. 1203313 +  -9.8  -5.00616   GCCTCAATAGCCTGG       CAAAGAAACCGGA GAAC TCCGGTTT-TTTG        TTTTTTAACGGGGCG 100 225
 JR441_06195 NONE
        yjcZ 1203811 .. 1203838 + -16.4  -3.31937   TTTAAGATGTATTGA        GGAAGTACGGGT TATA ACCCGTGCTTCC         TTGCCTTGTGTTTAT 100 36
      spoVIF 1204238 .. 1204257 +   -15  -2.50016   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA  95 76
 JR441_06215 1206916 .. 1206935 +    -5  -5.71712   GATATGTATAAAAAA            CCGTTC ATACGAGA GAACGG             TTTTTTTATATGCAG  88 30
        metI NONE
        metC 1211324 .. 1211361 + -15.2  -3.75024   CCAGTTGCGGTTCGT   TAA-AAAAGAAGCCGGG GATGG CCCGGCTTCTTTTATTA   TTGTTCGTCATCAGG 100 23
 JR441_06255 1213419 .. 1213435 + -12.3  -5.41359   GAATCATAGCTTAAA              CCCTTGC ATA GCAAGGG              TTTTTTACTTTACTT 100 33
 JR441_06280 NONE
 JR441_06285 1217502 .. 1217515 +  -2.4  -3.63367   GAAGGAGGCTCTATA               GAGT GAATCA ACTC                GTTTTTATTGAAGGC  47 25
 JR441_06290 NONE
 JR441_06295 NONE
 JR441_06300 NONE
 JR441_06305 1219494 .. 1219509 +  -3.4  -3.28712   GTAAGGCGTTTTGAC              TTAAAT AGTT ATTTAA               TTATACCAAAACGCC  47 68
 JR441_06310 NONE
 JR441_06315 NONE
 JR441_06320 NONE
 JR441_06325 NONE
 JR441_06330 NONE
 JR441_06335 NONE
 JR441_06340 NONE
 JR441_06345 NONE
 JR441_06350 NONE
 JR441_06355 1224766 .. 1224788 +  -4.6  -3.83998   TTAAACACAAAAAAA           GCACCGAAGC AGA GCCCCGGCGC           TTTGATATGAACTGG  59 37
 JR441_06360 NONE
 JR441_06365 NONE
 JR441_06370 NONE
 JR441_06375 1227371 .. 1227418 +    -7  -5.65927   AAGACGGAAAGCCTG CGGACACTGATCATTGTACACA GATA TCTGTGCTTTGGTTGGTGTCCG TTTTTTATTTCAGTG 100 54
 JR441_06380 1228127 .. 1228170 + -12.5  -5.63517   AAGACGGAAAGCCTG CGGACACTGAACTTACAGC ATAAGC GCTGTTTGTTTGGTGTCCG TTTTTTATTTCGCAA 100 45
 JR441_06385 NONE
 JR441_06390 NONE
 JR441_06395 1229207 .. 1229230 +  -5.3  -5.25906   ATAGTGATCTAAAGA          CTCTATCCC TTAATT GGTATAGAG           TTTTTATTGATTTCT  86 95
 JR441_06400 1230014 .. 1230024 +  -2.6  -2.62616   CCTTTGTCATGCTCC                 TTAT CCG ATAA                 TAATGTGGGAGGTGA  41 120
 JR441_06405 1230227 .. 1230246 +  -8.6  -5.53436   GGAGAAATCGTTAAA            GCATCTGA ATAA TCAGGTGC             TTTTTTATATTCTCT 100 14
 JR441_06410 NONE
 JR441_06415 NONE
 JR441_06420 NONE
 JR441_06425 NONE
 JR441_06430 NONE
 JR441_06435 NONE
 JR441_06440 NONE
 JR441_06445 NONE
 JR441_06450 NONE
 JR441_06455 NONE
 JR441_06460 NONE
 JR441_06465 NONE
 JR441_06470 NONE
 JR441_06475 NONE
 JR441_06480 NONE
 JR441_06485 1239755 .. 1239777 +  -9.9   -4.7254   AAAGAAGAAGCATAA          GAGCCC-GGT TGTT ACCAGGGCTC           TTTTTAATACAAAAT 100 26
 JR441_06490 1240353 .. 1240366 +  -5.3  -3.54951   CTGGATGGGTGTCTA               TGACA ACGA TGTCA                TTATGTCATGGACTC  58 57
 JR441_06495 NONE
 JR441_06500 NONE
 JR441_06505 NONE
 JR441_06510 NONE
 JR441_06515 1249994 .. 1250010 +  -2.3   -3.7574   GAACAAATTTTAGAT              TTACAAA GAA TGTGTAA              TGTTTTAATGGTAAA  49 112
 JR441_06520 NONE
 JR441_06525 NONE
 JR441_06530 1250951 .. 1250975 +  -8.5  -5.27335   CAAAAAAAGATGAAC          AAGCTGCTGGG TAA TCCAGCGGCTC          TTTTTATTTCAAAAA 100 12
 JR441_06535 1251837 .. 1251859 + -12.8  -4.05926   ACTAAAATAAGAGAA           TCCCTTCTCG TTA TGAGAAGGGA           TTTATCCGTTTATTC  95 31
 JR441_06550 NONE
 JR441_06555 1257258 .. 1257282 + -15.1   -3.6445   GGCGTATTAGGAATG          CATGGTAGCGG TGA CCGTTACCATG          TTTGAACGTTCTTAT 100 401
 JR441_06560 1258111 .. 1258127 +    -8  -5.15969   ACATAATAATATAGA              CCGCAA GCAAA TTGCGG              TTTTTTCGGTTAAAC  93 41
 JR441_06570 1259078 .. 1259092 +  -3.6  -4.14633   TTTTCTATTTAATAT               TTTTTG AGA CGAAAA               TGTTTTTTAAAGCTG  58 122
 JR441_06575 1260048 .. 1260090 + -16.7  -3.24709   GAAGCGCAATTGAAA TAAAATAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTATTTTA TTCATGCATGTTTTG 100 100
        manR 1262980 .. 1262997 +  -7.7  -5.88565   TTTGGATTATTAAAA             GCAGGGA TTAT TCCTTGC              TTTTTTTGTTATGGG 100 28
        manP NONE
        manA NONE
 JR441_06600 1266697 .. 1266723 + -17.4  -2.72049   GGTAAATAATCCAAA         CAAACGCAGGCG CAG TGCCTGCGTTTG         TAATTAAGGACTCTA 100 32
        ybaK 1268565 .. 1268612 + -10.9  -3.65714   TAGATGCAGATATAG GGGAAAC-GAAAAAGCTTAGTC ATGTC GATTAAGCTTTTTCCGTATCTC TTTCAAATATGATTT  88 38
        pdaC 1272895 .. 1272914 + -13.6   -5.5762   AAATAAATTACAAAA            GGCTGTCC GTAC GGACAGCC             TTTTTTCTATTTAAT 100 35
 JR441_06655 1274727 .. 1274745 +  -3.7   -4.8622   TCCAAATGAAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  69 32
        fdhF NONE
 JR441_06675 1279468 .. 1279492 + -13.6  -5.14563   GAGATTGACCTCCTG         CCCGAGC-GGC TTCA GCCAGCTCGGG          TTTTTTGATGAAAAG 100 33
 JR441_06680 1280314 .. 1280343 + -14.5  -5.24129   AAGCTAATTTACAGT       TGCACGTTTTTCA TCTG TGGAAAACGTGCA        TTTTTTATAGCAAAA 100 41
 JR441_06685 1281008 .. 1281029 + -13.1  -5.34555   TATTCGACTAAAAAA           GAAAGAGCC TATG GGCTCTTTC            TTTTTTATAATGTAA 100 30
        yjiB NONE
 JR441_06700 1284105 .. 1284125 + -12.7  -4.80455   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 37
 JR441_06710 1285321 .. 1285344 + -13.2  -4.64591   TAACAAGTACAAAAA          GCCGCTTTTC CCTC GGAAAGCGGC           TTTTGTCTGTCATTC 100 38
 JR441_06730 1288766 .. 1288778 +    -2  -4.52502   AGAGAGTAAAGGATT                TTGA CTTAT TCAA                TTGTTTATTTTTAGA  58 210
 JR441_06735 NONE
 JR441_06740 1290627 .. 1290671 + -13.9  -5.76237   CCTTTTAATGAATCT GACATTGCCA-AAAGCGTTC CTTACC GAGTGCTTTCTGGCAATGTC TTTTTTGTTTATATG 100 42
        uxaC NONE
 JR441_06750 1293693 .. 1293703 +  -2.6  -2.95102   ATATAATATAGAGAA                 TATT TAA AATA                 ATTTGTAAATAAAAT  43 43
        allD NONE
 JR441_06760 NONE
        uxuA NONE
 JR441_06770 NONE
 JR441_06775 NONE
 JR441_06780 1300161 .. 1300181 +    -4  -4.06419   CGATTGACGACGTGA           TGTCCCGTT TTTC AGCGGG-CA            TTCTTTATACAGAAA  58 26
 JR441_06785 NONE
 JR441_06790 1303176 .. 1303198 +  -9.2  -3.82604   GCTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA  83 34
        yjoB 1306087 .. 1306111 + -12.9   -5.4756   TTCACTAAAAAGAAA          GCACGGGTGTT TGA AAAACCCGTGC          TTTTTTGTTGCGGTT 100 33
        rapA NONE
        phrA 1307491 .. 1307518 + -14.4  -4.20918   ATCAAACATGATGCA        TAAAAAAGACCC TTAG GGGTCTTTTTTA         TTTCTTCAGCTTCCA 100 30
 JR441_06825 1308848 .. 1308883 + -18.6  -3.08798   AGGAAAAGCTGTAAA    TGAAAAGACGGAAGCT GTGA AGCTTCCGTCTTTTTA     TCTTACATACAAACT 100 27
 JR441_06835 1309948 .. 1309959 +  -2.2  -4.42386   CGATATGTGGAAGCC                GTCA AGCT TGGC                 TTTTATAAATAAAAC  58 2
 JR441_06840 1310895 .. 1310919 + -12.2  -2.67171   GTTAGGTTCTCTTCT          GGGCTGAGGA ATATA TCCTTAGCCC          GTATTTGATCAGATG  83 36
 JR441_06855 NONE
 JR441_06860 NONE
 JR441_06865 NONE
 JR441_06870 NONE
        xkdD NONE
        xtrA 1314749 .. 1314794 + -15.7  -5.63517   AAGACGGAAAGCCTG CGGACACTGATCAATTGCACAG CAT TTGTGC-GTTGATTGGTGTCCG TTTTTTATTTGCCAA 100 61
 JR441_06885 1315389 .. 1315408 + -11.4  -4.42386   GAGCATGACACATAA            GCGGCTGG CTGA TCAGCCGC             TTTTATGAATAAACA  95 76
        xtmA NONE
 JR441_06895 NONE
 JR441_06900 NONE
 JR441_06905 NONE
 JR441_06910 NONE
 JR441_06915 NONE
 JR441_06920 NONE
 JR441_06925 NONE
 JR441_06930 NONE
 JR441_06935 NONE
 JR441_06940 NONE
 JR441_06945 1324630 .. 1324652 +   -15  -4.58395   GAATCAGCCCATACG           CAGACCTTTC TCA GAAAGGTCTG           TTTTTAAAAGATGAA 100 49
 JR441_06950 1325164 .. 1325194 +    -4  -3.18728   GATGGGCATAAAGAA      GC-CGTGTATCTC TACTAT GCGATGCACGAGC       TTCACTATTCCCCAT  48 46
 JR441_06955 NONE
 JR441_06960 NONE
 JR441_06965 NONE
 JR441_06970 NONE
 JR441_06975 1332163 .. 1332181 +  -4.5  -5.28942   AAGGTATAGACAAAA             CCGCTTC AGTAC GAAGGGG             TTTTTATTTAGCATG  81 32
 JR441_06980 NONE
 JR441_06985 NONE
 JR441_06990 NONE
 JR441_06995 NONE
 JR441_07000 NONE
 JR441_07005 NONE
 JR441_07010 NONE
        xepA 1338004 .. 1338017 +  -5.3   -4.2349   CGGTAAAAGGGACCG               CTGTT TCAT AACAG                TTTTGGCTCTCGGAA  67 15
 JR441_07020 NONE
 JR441_07025 NONE
 JR441_07030 NONE
 JR441_07035 1340674 .. 1340696 +  -5.7  -6.15536   TGATGAATATAAAAA          GCGACATATT GTTT AAT-TGTCGC           TTTTTTTTGTTCGTT 100 10
 JR441_07070 1346527 .. 1346548 + -17.3  -5.79595   AATTGTGATTCATTT           GCCCTCCGG CGCG CCGGAGGGC            TTTTTTATTTTGGGA 100 40
 JR441_07075 NONE
 JR441_07080 1349888 .. 1349912 + -21.5  -4.95155   TGTCATAACCTCAAA          CCCCCTGTCCG TAA CGGACAGGGGG          TTTTTATGCTCTGAG 100 33
 JR441_07095 1352741 .. 1352760 +  -7.2  -5.64274   TTGGTAAACAGACAT            GAATCCTT GAAA GAGGATTC             TTTTTTTATCACTGA 100 24
        dppA 1353674 .. 1353685 +  -4.4  -2.64099   CATGACTGAGCTTGC                GATG CGGA CATC                 ATTCTGCTAAAGGGG  47 4
        dppB NONE
        dppC NONE
        dppD NONE
        dppE 1358289 .. 1358316 +  -7.8  -5.61913   CGGTGATTGAGGAAA        TACTGCTTCTTT ATGC GAAGGAGCGGTA         TTTTTTCTCTTTCTT 100 44
 JR441_07125 NONE
        ykfB NONE
        eepC NONE
 JR441_07140 1362311 .. 1362338 +  -8.5  -2.60809   TAAGATAAATAAAAA        GAGTGGCTC CTTTTTACTA GAGCCACTC         CATTTGTTTATACTT  65 33
 JR441_07155 1365032 .. 1365054 + -10.7  -5.77632   TTGGTGAACGTTAAA           CCCAAAACA TAAGT TGTTTTGGG           TTTTTTTGTACTTTT 100 34
        hmpA 1366476 .. 1366502 +  -3.8  -4.58685   AACACATACATGAAA         CTCTTCTC CTTTCAGATCA GAGAAGAG         TTTTTAGAAGAGTTT  66 40
 JR441_07170 1367659 .. 1367680 +    -3  -6.04324   ATAACAATTAAGATT           GCTCTC TAATTTTAAC GAGAGC            TTTTTTCTTTTTTAA  90 30
 JR441_07175 NONE
 JR441_07180 1368911 .. 1368949 +  -6.7  -6.09196   ACGGAGGGAAAAAAG  CCCGGGAGAGTCAATCTC ATGT GAGAC-GACTGTCCGGGG   TTTTTTTGTTTTCGG 100 160
        ykkC NONE
        ykkD 1369657 .. 1369671 +  -2.9  -3.14647   ATTCTGTCATAAATT               GATTT TTATC AAATC               TTCAGTATAATGGAT  45 29
        purU 1370908 .. 1370941 + -13.3  -5.88565   GTGGTACCACGGAAA     CCCATTTCGTCCTTA TGAA TCAGGATGAAATGGG      TTTTTTTATTGTAGA 100 307
 JR441_07200 NONE
        proA 1373356 .. 1373378 + -11.4  -5.28176   ATGTTCAATGAAAAA           GCTTATCTCG TAA TGAGATAAGC           TTTTTTATACGTGAA 100 48
 JR441_07210 1373890 .. 1373918 +  -7.4  -5.52986   TACTGAATAAATAAA        AAGAGGATGCCT GTACA AGGCATCCTCAA        TTTTTTTGATGAAGT 100 31
 JR441_07220 1374918 .. 1374939 + -13.1  -5.21709   TAAAATAATGATCGG           CATCCTGAG TGTT CTCAGGATG            TTTTTTGGTGTCGGA 100 33
       rsbRB 1380526 .. 1380546 + -14.1  -5.31275   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 31
        ykoG NONE
        ykoH NONE
 JR441_07275 NONE
 JR441_07280 1387779 .. 1387796 + -14.1  -4.77036   GATGACTAATCAAAA             CCCCCGC TGCA GCGGGGG              TTTTTCATGATAAGA 100 32
 JR441_07285 1387985 .. 1388012 + -11.4  -3.15231   ACGAGACACAAACAA        CAGAATAAGGGC TTAG GCCCTTGTTTTG         TTCCGTAATTGTGAT  84 18
        mgtE 1389862 .. 1389885 +  -8.1  -5.00196   TTATAAACGTAAAAA          GTCCGTCTC AACTGC GAGCCGGAC           TTTTATTATTTAACG  95 35
 JR441_07300 NONE
        ykoL 1390832 .. 1390857 +  -9.2  -5.79588   AAATCATAAAAATTA         TCCTTATACA AGATAA TGTATAAGGA          TTTTTTTGCTTTTAG 100 10
 JR441_07310 1391453 .. 1391474 +  -8.1  -5.96894   TCGTTAACTATTCTA           CACTCT-CTG TTT CAGGAGAGTG           TTTTTTTGTTTCCAT 100 34
 JR441_07320 1393218 .. 1393242 +  -2.2  -5.28481   ACCTATCAAAAAAAA         GACTGATGC CTCGGTCA GCA-CAGTC          TTTTTTGATTAAATC  73 20
 JR441_07330 NONE
 JR441_07335 1396986 .. 1397008 + -12.1  -5.08601   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA 100 35
 JR441_07355 1403068 .. 1403078 +  -6.8   -2.9175   ACGTTGACAAATCAT                 TGCG CTG CGCA                 TATCATTGACGTATA  58 34
 JR441_07360 1404118 .. 1404139 + -13.1  -5.19879   GGGCGTAATCTGAAA           GACTCTGCT TAAA AGCAGAGTC            TTTTTGTGTTTGAAG 100 33
        sigI NONE
        rsgI 1406732 .. 1406754 +  -9.8  -3.03771   TCAGTTCTTCAAAAC           GGTGACGGAG ACG CTCTGTCTCC           TGTTCGGCGATCTCC  71 486
        htpX 1408391 .. 1408412 + -13.1  -5.86976   TACAAACACATTGTT           CCTCTGAGA GAAT TCTCAGAGG            TTTTTTATTTTATCC 100 41
        ktrD 1409905 .. 1409923 + -10.3  -5.26875   ATCGGATAGGCAAAA             CACCGCA TACTT TGCGGTG             TTTTTTGATTGCCAA 100 32
 JR441_07395 NONE
 JR441_07400 1410382 .. 1410413 + -14.6  -5.28983   AACAACAATAAAAAA      G-ACCTCTTAGGCGG CGT CCGCTTAAGAGGTGC      TTTTTCTATTTTAAA 100 30
        kinE NONE
         ogt NONE
 JR441_07420 1414613 .. 1414648 +  -8.3  -5.14965   AAAGAAACAAAAAAA    CCGCT-GACTCGGCTC CAAAT GAGCAAAGTCCAGCGG    TTTTTTAATGCACCT 100 19
        mtnE 1419474 .. 1419504 +  -7.7  -5.22312   GGACGAGAAACGAAA      CCTCTTTAGAC-GC GATT GCAGTTTGAAGAGG       TTTTTTGATATGGAT  93 182
        mtnW NONE
        mtnX NONE
 JR441_07455 1422028 .. 1422041 +  -8.1  -3.05384   GAAATTGAAAACACT               CCAGC ATCA GCTGG                TTAAATAAAAGGAGG  67 4
        mtnD 1422611 .. 1422631 + -16.9  -5.28414   AATAAGCATGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 36
       spo0E 1423448 .. 1423468 +  -6.1  -5.60993   ATGCATATATAAAGA            GAGAGCTTT TCG GAAGCGCTC            TTTTTTTCTGGAAAA  91 52
 JR441_07475 1423943 .. 1423965 + -15.6  -3.29144   CACGAAGATAAAAAA           CCCTCCTGAC ATG GTCAGGGGGG           TTATGAAGCGGATAC 100 30
        mhqR 1426122 .. 1426148 +  -5.2  -5.38348   TAATAAGTAAAAAAA         GGAAGCCT GATATGTCACA AGGCTTCC         TTTTTTGCTATTTTT  84 31
 JR441_07505 1431801 .. 1431822 +  -5.1  -5.69068   AAAAAACTAAGGACG           AGCTGTATC CTTG GATACGGCC            TTTTTTATGTTTTTC  88 208
        queC NONE
        queD NONE
        queE NONE
        queF 1434516 .. 1434534 +  -9.6  -5.61277   ACAGAAGCAGATTAA             GGCGTACA ATT TGTACGTC             TTTTCTTTTTTTATC 100 270
 JR441_07540 1436160 .. 1436204 +  -8.1  -3.52506   CTTGAAGAAGTCGTA TAAAAAAGTCGTTTTCCTT AAAGGAC AGGGAATTCGACTTTTTTA TATTTGAATTTGATT  72 94
        ykvP NONE
 JR441_07550 NONE
 JR441_07555 1439651 .. 1439670 +  -2.8  -4.65895   ATCGACCATATGGTT            TCTCCTTA GAAA TGAGGGGG             TTTTTACATAAAAAA  62 458
 JR441_07560 1440179 .. 1440197 +  -7.4  -5.36441   GGAAATAGACAAAAA             CGCCGATT CAT GATCGGTG             TTTTTTATGTAAAAA  95 13
 JR441_07570 1440859 .. 1440880 +  -9.5  -4.96762   AGCCAAGAAGCTGAA           GGTTTCTCA TACG TGAGAAGCC            TTTTTATCATATATG 100 27
 JR441_07575 1441783 .. 1441813 +    -9  -5.58454   GTTTTTGCCGTCTAA       GCATAGAAGAGACA ATT TGTCTCAGCTGTGC       TTTTTTTCATATAAA 100 26
        ykvU NONE
        stoA 1443785 .. 1443806 + -10.2  -5.21709   ATGGACGGAAGAATA           GCTGAGAG CATAGA CTCTCAGC            TTTTTTCATATAGAG 100 25
        pfeT 1445936 .. 1445961 + -13.3  -5.03994   GACTCCTAAAATAAA         ACCAGCAGCCT AATC AGGCTGCTGGC          TTTTTATGTATCAAG 100 27
        papB 1447446 .. 1447468 +  -2.6  -5.38951   AATAGAAATAAAAAA           GGACTTTGTT CTC GACATCGTCC           TTTTTTATCTGCATT  74 39
 JR441_07605 1448659 .. 1448672 +  -6.7  -3.46647   CTGGATTACCGTCTC               GTCGA AAGA TCGAC                TGTTTAGTGAATGCA  62 5
        glcT 1449672 .. 1449688 +  -4.4  -4.17048   ATTGAGGGAAAAAAA              CGGGAA GTTCA TTCTCG              TTCTTTTGCGCACCC  61 89
        ptsG 1451950 .. 1451975 + -14.1  -3.58365   AAGGGTGTTAGTACG         CCGTGCTTGTC AGAT GACAAGTACGG          TTGTATGATATAATA 100 39
 JR441_07620 NONE
        ptsP 1454023 .. 1454046 + -13.2  -5.53991   AGTAATGTACAAAAA          CCAGAC-GGCC TCC GGCCTGTCTGG          TTTTTTTCATAAGTA 100 36
        splA NONE
        splB 1455449 .. 1455474 +  -9.7  -5.24129   GAATATTTCACTTAA         ACGGGCTGTTG TGAT CAACAGCTCGC          TTTTTTATAAAAAGG 100 26
 JR441_07645 1458256 .. 1458281 +    -7  -5.79595   TGTAATCCAATTACA         TCCCCAA-ACA TCATT TGTTTTGGGGA         TTTTTTATTTTAAGA 100 36
 JR441_07650 1459266 .. 1459290 +   -13  -6.04419   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTATTATTTT 100 31
 JR441_07660 1462539 .. 1462566 +  -7.8  -4.87892   AAAAAATAAAAAACA        GGGTGCACAA-CT AAA AGATTGTGTGCCC        TTTCTTTTATTCAAA  88 32
        kinA 1464520 .. 1464539 +  -9.3  -4.02736   CCAAAAAAATAAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT  85 29
        cheV 1467194 .. 1467221 +  -9.2  -5.45802   TTGAATAAATAAAAA        CAGCCGTTGCC AGAAAGA GGC-ACGGCTG        TTTTTATTTTAAAAG 100 33
        fadH NONE
 JR441_07710 1472936 .. 1472956 +  -8.3  -5.72622   CAAGATCCGAAAAAA            CTTGGCG CTACCCC CGCCAAG            TTTTTTATTTGTCAA 100 168
 JR441_07715 1473662 .. 1473680 +  -4.5  -3.54741   AAGATTCCTGAAATA             GGGGGAA CAAGC TTCCGCC             TTTGCAAAAGTAATC  55 39
 JR441_07720 1474361 .. 1474374 +  -3.1  -3.57615   GCGGTAGAGCTGAAA               GTAAG TTGT CTTGC                TTTCAGAGGTATTCA  50 110
        abbA 1474625 .. 1474644 +  -6.5   -5.4505   GGACACCCTATAATT            GATACTC CACAAA GAGTATC             TTTTTTATTGAAAGG  93 43
 JR441_07730 1475186 .. 1475201 +  -5.4  -5.24796   CGCTCATTGAATAAG              TAGGCT GTAC GGCCTA               TTTTTATTATATAGG  81 23
        ccpC 1476219 .. 1476235 +  -8.7  -6.04953   AAAATCCATTTTAAA              GACAGCG AGG TGCTGTC              TTTTTTTATTTATCT 100 27
 JR441_07740 NONE
 JR441_07745 NONE
 JR441_07750 1478169 .. 1478191 +  -5.5  -5.94214   TCTGATCACTCACTG           GGAACTGCT AAAAC GGCTGTTCC           TTTTTTTCTTGTCTT  91 36
        dapD 1478993 .. 1479015 + -16.4   -3.7732   AAGTTTGATAAAAAA           GGCGTGGATA ATA TATCCACGCC           TTATTCGTATAGGCA 100 45
 JR441_07760 NONE
 JR441_07765 1480480 .. 1480504 +  -8.6  -5.16038   AATTCAGTAATATAA          AAACCGAAGC AAAAA GCTTCGGTTC          TTTTATTTATTCTGT 100 31
        ahpA 1482113 .. 1482134 +  -4.4  -4.21607   CCAAGAACGAAAAGC           GGTCTAGC ATATTC GTTAGGCC            TTTCTGTTAAATAGG  63 47
        ykuV 1482637 .. 1482651 +  -8.6  -5.72622   AGTATTTCCTAAAAA               CCTGAT CAC ATCAGG               TTTTTTATTTGTGCA 100 55
         rok 1483662 .. 1483683 +  -9.5  -5.80364   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 39
 JR441_07795 NONE
 JR441_07800 NONE
 JR441_07805 NONE
        mobB NONE
 JR441_07815 NONE
        moaD 1488955 .. 1488978 + -15.3  -5.14985   AGCGGGGGATGAAAA          CCGGACGGC ATTTCA GCCGTCCGG           TTTTTCTGTATTTCA 100 29
 JR441_07825 NONE
 JR441_07830 1492768 .. 1492783 +  -7.6   -4.6526   GAATAATATGAAAAG              CCTTCA ATAT TGAAGG               TTTTTGGAAATTTAT  84 35
        yknW NONE
 JR441_07840 NONE
        yknY NONE
        skiZ 1496585 .. 1496605 + -14.1  -5.88197   CTGCGTTATGAGTAG            CCTCATGCA ACA TGCATGAGG            TTTTTTTATGTTTAG 100 26
 JR441_07855 NONE
        pfkB NONE
 JR441_07865 1500452 .. 1500474 +  -9.2  -5.18726   AAAATAAGAAAAAAA           GCGTCCTT GGTTCGA AAGGACGC           TTTTTCTTATCCGGC 100 34
        lepB 1501173 .. 1501200 +   -12  -5.45802   CAAACAAAATAAAAA        CGCCTTGCTGGCC TTT GGACAGCA-GGCG        TTTTTATTTTGAAAA 100 29
 JR441_07880 1503281 .. 1503296 +    -9  -5.53991   ACGCCGAATAAAAAA              GCAGAG ATTT CTCTGC               TTTTTTTGATACCTA 100 30
 JR441_07885 1504248 .. 1504265 +  -8.4  -4.99947   GCGAAAAAATAAAAA             GGAGGC GGAAAA GCCTCC              TTTTATTTACTTAAA  95 29
        abhA 1507437 .. 1507459 +  -7.7   -5.1287   AATTATGCTAAAAAA           GGCGGAG CGATATCAT CTCCGCC           TTTTTTGCGTATCAA  93 41
        kinC NONE
 JR441_07915 1509769 .. 1509780 +    -3  -2.85351   GAATATGATAAAATT                TGAT CAAT ATCA                 TGTCATATAAAGGAG  42 54
        ktrC 1510481 .. 1510497 + -10.1  -4.90906   TAGCAGTCAAATAAG              CCGTCCT TTA AGGGCGG              TTTTTCGTATTATCA 100 38
         ade 1512361 .. 1512385 + -14.3  -5.42259   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAATGCCTC          TTTTTTTAAACCTCC 100 29
 JR441_07940 1515438 .. 1515458 + -13.3  -5.79595   TTTAAAATAAAGAAA            TGGCTGGCA TTG TGCCAGCCG            TTTTTTCTTTTAGCG 100 31
 JR441_07955 1517169 .. 1517187 +  -8.9  -5.47218   CTATCGTGTGAAAAA             GAGCTGA CTCGA TCAGCTC             TTTTTTTGAATGAAA 100 19
        pdhA NONE
        pdhB 1519713 .. 1519736 +  -8.2   -3.3464   AAACTGCATAATCGA          GAGGGAAGAT GAAC GTTTTCCCTC           TATTATATACCTGTT  70 43
        pdhC NONE
        lpdA 1522571 .. 1522594 + -13.2  -6.09196   TTTTCATATCAAAAA          CAGCCCTCGCT CAA AGCG-GGGCTG          TTTTTTTATTTTGAC 100 41
 JR441_07985 1523517 .. 1523539 + -17.8  -5.84011   TGAAGAGTAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 31
 JR441_07995 1525470 .. 1525511 + -15.3  -3.53718   CGCGAAGATTAAGAT GTAAGAAAAAGAGCCGGGG GATA TCCCGGCTCTTTTTTATGC  TTGTGATACTTTTTG 100 22
 JR441_08005 1526590 .. 1526609 +  -5.7  -4.65895   AAGCGATAGTGAAAA            CGAACCG CATGAA TGGTTCG             TTTTTACGTGAGAAG  73 43
 JR441_08010 1527494 .. 1527524 +  -2.5  -2.65538   ATTTGAAGAGTATCT       TCATGCTCGGAAG TAGGC CATTTGAGCAGGA       TGATCTCAGCTTGTT  41 10
 JR441_08015 1528003 .. 1528023 + -14.1  -3.49924   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATAATTTGAA 100 65
 JR441_08030 NONE
 JR441_08035 NONE
        ylaC NONE
        sigQ 1534176 .. 1534200 + -12.2  -5.15969   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 31
        typA NONE
 JR441_08065 1537603 .. 1537637 + -17.4  -3.39727   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 21
 JR441_08080 1540043 .. 1540057 +  -8.6  -3.85114   GAGATCAGGTCTCGC               TCAGCT CGC AGCTGA               TTTGCTGTAACATTT  80 1
        glsA NONE
 JR441_08095 1541977 .. 1541999 +  -4.2  -5.60993   AAATAAATGATAAAA           CTCAAACT TATTAAC AGTTTGGG           TTTTTTTATAACCGC  86 35
        ftsW NONE
         pyc 1546911 .. 1546942 + -11.8  -5.71712   AAAAGCATAATAAAC      AAAGAGTGTATATC ATTT GATATACACTCTTG       TTTTTTTATATAGAA 100 31
 JR441_08115 1549608 .. 1549623 +  -3.3  -2.90496   ACATAGATGGCATTT              TGAGT AAAAAA ACTCA               TAATTTAAGAGAAGA  44 140
        coxB NONE
        ctaD NONE
        ctaE NONE
        ctaF NONE
        ctaG 1554586 .. 1554608 +  -9.9  -4.47271   GACGATATCATAAAA           GGTACAGCG AAATA TGCTGTACC           TTTTCGTTACATTTG  91 28
 JR441_08150 1555628 .. 1555642 +  -3.5  -2.53015   ACAAGAGATTGTGAA               TCGCC ACGGG GGTGA               TAGATTGAAAAATAT  43 90
 JR441_08155 1556693 .. 1556715 +  -6.9  -5.20783   GCGATGGTAATGAAA           GCCGCGGAC GAATG GTTCCCGGC           TTTTTCTATTTCCAT  90 31
 JR441_08160 NONE
 JR441_08165 1557575 .. 1557591 +  -2.9  -5.14563   GACAAAAGATTAAAA              GGCCC CGAAAAA GGGTC              TTTTTTCATGCGGAC  70 28
        ricF 1558136 .. 1558156 + -11.2   -4.2349   GATGTAAAGTGTCCT            GACGAGAC TGGCC GTCTCGTC            TTTTACATATAAGAG  90 24
 JR441_08175 1558477 .. 1558496 +   -15  -2.96822   TAGCTATAAAAAAAT            CCCCGCAG GCAT CTGCGGGG             TCCTTCTATTCCTTA 100 38
        rsmD NONE
        coaD 1559826 .. 1559847 +  -5.9  -5.83226   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  93 20
 JR441_08195 1562017 .. 1562028 +  -2.2  -2.97667   AAAGAAATAGAGAAT                TGGG AGGG CTCA                 TAATTTGCTACGTAA  42 11
        ddcP 1563051 .. 1563069 + -13.2  -5.01546   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 18
 JR441_08215 NONE
        rpmF 1565260 .. 1565281 + -11.5  -5.71295   TAACTAATAAGAAAA           GCGCGGGGT GAAA GCCCTGCGC            TTTTTCTTTTTCTCT 100 34
        gerR 1565997 .. 1566022 +  -5.5  -4.40882   AACGCCTGAAATGAA         CCGGCCCTAT AGTAAGA ATA-GGCCGG         TTGTTTTGATTTCTA  70 44
 JR441_08235 NONE
        bshC 1569281 .. 1569297 +    -8  -6.24157   TAAAGTTTTAAAGAA              CCCTGA CTAGT TCAGGG              TTTTTTTTTATGGGT 100 43
        mraZ NONE
        rsmH NONE
        ftsL NONE
 JR441_08260 1573372 .. 1573396 + -15.1  -5.66684   AATCCTGATTAAAAA          GAAAGCCTGCG TTA TGCAGGCTTTC          TTTTTTTATGCCTTC 100 29
 JR441_08265 1575413 .. 1575436 +  -8.9   -3.8165   AGAAGATGAAAAGGA          GGCAG-CCGA TTGAT TCGGGCTGCC          TATTCTTTTATTGCA  78 13
 JR441_08270 NONE
 JR441_08275 NONE
 JR441_08280 NONE
       spoVE 1580741 .. 1580772 + -13.2   -3.7511   TGGAAACAATTGATG      CGATAACCCTGT CCAACAAA ACAGGGTTATCG       TTATGTTATAGAGAA 100 78
        murG NONE
        murB 1582892 .. 1582917 +   -12  -4.13767   ACTGTAAGCAAACGA         CAAACGGCAT CATAGT ATGCCGTTTG          TTTTGGAATAGACAG  93 74
       divIB NONE
 JR441_08305 NONE
 JR441_08310 NONE
 JR441_08315 NONE
        ftsA NONE
        ftsZ 1588256 .. 1588281 + -14.9  -5.98675   CGCGGCTAATGTAAA         GGACAAAATCG TTTT CGATTTTGTCC          TTTTTTGTTTTTCTC 100 32
 JR441_08330 1592864 .. 1592881 +  -9.1  -5.74122   ATTAAGTGGAAAAAA             GCTGCCG TCAT TGGCAGC              TTTTTTTATATCCTC 100 36
     spoIIGA NONE
        sigE 1594790 .. 1594802 +  -5.5   -2.7641   AACCCCTTGATTTTA                CAGGG ATT TCCTG                ATTTCGACAGTTTTT  52 57
        sigG 1595682 .. 1595719 + -18.1  -3.30039   ATATTCATCAATAAT   GAAAAGCCTTTAAAACG ATGT TGTTTTAAAGGCTTTTC    TATTGATTATGGATG 100 27
 JR441_08350 1596732 .. 1596750 +  -8.8  -5.05606   GGAAGCGGTGAAAAG             CGGAGTAC ATC GGACTCCG             TTTGTTTTTATTAAG 100 135
        ylmB NONE
 JR441_08360 1598548 .. 1598561 +  -2.3  -5.18561   GATGTGGTAAAATAA               GTGGG AAAT TCCGC                TTTTTTAAATGTTTG  69 141
        pgeF NONE
 JR441_08370 NONE
 JR441_08375 1600577 .. 1600602 +    -2  -2.83103   GACGAACATCAGAGG         TGGTAAAGCGA GATGA TC-CTTTATCA         AGTTTTTTCGGTTTT  41 20
 JR441_08380 1600877 .. 1600900 + -14.6  -3.64703   TGTGACAGTTTGATA          GGGGCTTGGC AGCA GCCAAGCCTC           TTTACATAGAAGGGA 100 41
 JR441_08385 1601684 .. 1601698 +  -4.2  -3.55072   AGAGTTACGTTTGAA               CGACAA AAA TAGTCG               GTTTTTCAGTTTTTT  55 14
      divIVA 1602557 .. 1602586 + -12.9  -6.14618   GGTACCGCGAGATAA       GCTTTCTCGTCCC TTAT GGGATGAGAGGGC        TTTTTTTATTTTCTG 100 298
        ileS 1605401 .. 1605420 + -12.1  -5.60993   AAATAATGCAAAAGA            GCCCGGC GTAAAA GCCGGGC             TTTTTTTGTGCCAAG 100 35
        ylyA 1605889 .. 1605923 +  -8.6  -2.56728   AACGGATATCGAATA     TGGTCAGGCACTGT ATGAATA ACAGTGTCTGTCCG     GTTAATATGCCTGAT  68 4
        lspA NONE
 JR441_08410 1607513 .. 1607537 +  -8.6  -5.62045   CACCTTGTCCTAAAA         CCCCTCTATGC TCTG GCA-GGAGGGG          TTTTTTCTTCTATAT 100 148
        pyrR 1608205 .. 1608230 + -12.7    -5.626   GCAGGTCTTTGTATG         CCTCTTTGCGT AAAA ATGCAAAGAGG          TTTTTTTATACAGTC 100 112
        pyrP 1609681 .. 1609704 + -11.8  -5.43866   CTCTATTTAACCGTA          CCCCGAGTCTA TCT TAGAC-CGGGG          TTTTTTTCAGCCTTA 100 107
 JR441_08425 NONE
 JR441_08430 NONE
        carA NONE
        carB NONE
        pyrK NONE
 JR441_08450 NONE
        pyrF NONE
 JR441_08460 1619292 .. 1619307 +  -6.8  -5.84381   TGATGTACTTGAAAA              CAGGCT GTGA GGCCTG               TTTTTTTATTAATCC  93 79
 JR441_08465 NONE
        cysP NONE
         sat NONE
        cysC NONE
        cobA NONE
 JR441_08490 NONE
 JR441_08495 1625360 .. 1625381 + -14.5  -4.99043   AGAAGAAAGAAATAA           GCCAGAGCA CAAA TGCTCTGGC            TTTTCTTTATGCGGC 100 26
 JR441_08505 1629925 .. 1629947 +  -8.5  -4.77165   ATGATATAATCTTAG           GGGTAATAG CGTGT CTATTGCCC           TTTTATTATGAGAAC  95 47
 JR441_08510 1630904 .. 1630915 +    -3  -4.07568   CTTACTAGGCTAAAC                TAGA GACG TCTA                 TTTTACAGGGGGAAC  55 68
        remA NONE
         gmk 1631822 .. 1631833 +    -3  -3.09878   AGAAAATGCTGGAGG                TTGA ATAA TCAA                 TGTTAGATCCGTCAA  43 18
 JR441_08525 1632046 .. 1632074 + -10.5  -5.47218   GAATAGTAGCACAAG        TAGCAACCTATAT CAC ATGTAGGTTGTTA        TTTTTTTCCGTGCGG 100 35
       coaBC NONE
        priA NONE
 JR441_08540 NONE
 JR441_08545 NONE
        rsmB NONE
        rlmN NONE
        prpC NONE
        prkC 1642370 .. 1642385 +  -3.2  -2.77013   AACAAGGAGGGAAAA              TATGCC TGAG GGCAAA               ATTATTAAGGCGCTA  44 39
        rsgA NONE
 JR441_08575 1643940 .. 1643966 +  -3.1  -4.84527   AGCAGCTTTAGAAAA        GAGC-TGGGCATA CAA TA-GCCTAAGCTC        TTTTTCCTGTATGCA  67 40
 JR441_08580 NONE
       spoVM 1644833 .. 1644857 + -12.8  -3.85542   TTCACCACATAAAAA          CGCCTGCCAC ATATC GGGGCAGGCG          TTCATTTTGTTATAC  95 64
 JR441_08595 NONE
 JR441_08600 1647366 .. 1647394 + -19.1  -3.68394   TATATAGTTTCTGCA        GAATAGAAGGGCA ATT TGCCCTTCTATTC        TTATGTCTGCTTTTA 100 20
       sdaAB NONE
       sdaAA NONE
        recG NONE
        fapR NONE
        plsX NONE
        fabD NONE
        fabG NONE
        acpP 1654868 .. 1654879 +  -7.2  -4.25458   TCCCGCCGAAACGCG                GGGC TTTA GCCC                 TTTATTCGTGCAGTT  75 55
        rncS 1655730 .. 1655751 +  -8.7  -3.75535   TACGAAACAATAAAA           TCCCCCTTA TGAC TCAGGGGGA            TTTCAGTATGTATGC  78 28
         smc NONE
        ftsY 1660399 .. 1660428 + -10.1  -5.55695   AAGCCGACGATTAAG       AAAAAGGCCTCAA CATC TTGGGGCCTTTTC        TTTTTTATCTTCTTA 100 27
 JR441_08665 NONE
         ffh 1662784 .. 1662804 +    -4  -3.61398   TACCTTTTATGTAAT            CGGTTATA CATGA TAAAACCG            TTGTTAAGAAAAAAC  52 27
        rpsP NONE
 JR441_08680 1663409 .. 1663429 +  -3.9  -5.40072   ATATTTGACTAAAAG            GGAGAGG GCCGGCA CCTCCCC            TTTTTTTACACGCAA  78 29
 JR441_08685 1663901 .. 1663913 +  -5.5  -2.62184   AAAAGTAATTGAAAT                TCGCC AGA GGTGA                TCATATGACAAAGCG  51 13
        rimM NONE
        trmD 1665257 .. 1665267 +  -2.4  -3.49419   CTTGAAAACGATGTT                 CCGC TGT GCCG                 GTTTTTGTGGCCAAG  47 112
        rplS 1665674 .. 1665697 + -12.6  -5.60993   GATAACGAACGAAAA          GAGCTTGTTA CCTG TAACAAGCTC           TTTTTTTATACAGAA 100 42
        ylqF 1666646 .. 1666673 +  -9.2   -5.4833   GAACAGCCGACGATG        TAAAGGCGCGCA GAAA TGCGGGTCTTTA         TTTTTTCTTGGCTGA 100 23
        rnhB NONE
 JR441_08715 NONE
 JR441_08720 NONE
        sucC NONE
        sucD 1671795 .. 1671817 + -11.3  -3.31915   CGCATTAATAAAAAA           GGGACAGCC GTCAA GGCTGTTCC           TGCTTTTTCTAACAA  82 33
        dprA 1672744 .. 1672762 +  -6.8  -3.57908   GGAACCCTTTTGAAT             TATCGTTT GAC AAACGGTA             TTGTAATATTTAATA  64 28
        topA 1675006 .. 1675027 + -10.9  -4.21954   AACCACAGAAGTAGC           GGTGAGCAG GGTC TTGCTCACC            TTCTTTGTGTGTTAA  90 27
       trmFO 1676434 .. 1676446 +  -5.5  -3.04144   TACCATTTAAAAGCC                CTTCC TGG GGAGG                TATTAGGCATGGAGA  53 72
        xerC 1677367 .. 1677382 +  -6.2  -3.02856   GCATTTAAGAAAAAT              TAAAGG AGGC CCTTTA               TGTCATCTTTTCATG  56 23
        clpQ NONE
        hslU NONE
        codY 1680176 .. 1680194 +  -9.6  -5.95539   CATTAATCACAAAAA             GAACCCTT TTT GAGGGTTC             TTTTTTTATTTCAAA 100 35
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG 1684393 .. 1684419 +  -2.4  -2.83519   GCGGAGGGGATGATA         TTATTGTCTAAT ATC ATTAAACAAGAA         TCATCTATTTCTCCA  41 15
        fliH NONE
        fliI NONE
        fliJ 1686902 .. 1686916 +  -2.8  -2.62184   TTTATGATTCAAGGC               CATTAG GAG CGAATG               TAATGTCCGGCAAAA  41 20
 JR441_08810 NONE
 JR441_08815 NONE
        flgD NONE
        flgG 1690250 .. 1690277 +  -9.8   -3.8823   TAAACGTTAAGGAGG        GAGGGGAGGCGA GTAA TCGCTTCTCCGC         TGTTTTATGATTAAA  85 31
        swrD NONE
        fliL NONE
        fliM NONE
        fliY 1693100 .. 1693112 +  -2.7  -2.56864   AAGGAGAGAGATAGA                TTATG GCA CATAG                AATTTTAATTGTAGA  41 49
        cheY NONE
        fliZ NONE
        fliP 1694777 .. 1694789 +  -4.1  -3.08522   ATTTAATTGTGAAAT                CTTTG CTT CAGAG                CTTTTAGGGTAGGTG  47 6
        fliQ NONE
        fliR NONE
        flhB 1696946 .. 1696958 +  -2.7  -3.53012   AAAACAAAAAGTATA                TTGAA TTT TTCGA                TTTAAAAGGAGAGAA  48 22
        flhA NONE
        flhF NONE
        flhG NONE
        cheB 1702075 .. 1702096 +  -4.5  -2.67058   AAAAAAGAGAGGGTG           TGATTCAAA TGGA TATGAATCA            GTATTTAGATGTCTT  47 23
        cheA NONE
        cheW NONE
        cheC 1705221 .. 1705254 +  -3.9  -3.48378   GAAAAGCTCTTTGTC     GCCTTAGGTGCA-TCA TTA TGAGTACAACTGAGGC     TGTTGTTATAAAGGT  52 5
        cheD NONE
        sigD NONE
        swrB 1707130 .. 1707142 +  -4.8  -3.28924   TTTATGCAGAGGGTG                CTGC AGGCG GCAG                TTCTGCACAAAAATG  53 98
        rpsB 1707953 .. 1707981 + -12.6  -5.00616   GTAACCTATTCAAAA        GGTGATAAGAGG GACTG CCTTTTATCACC        TTTTTTCAAGAAAAA 100 37
 JR441_08935 1708969 .. 1708993 + -13.7  -4.61633   TCTTTTCAGGCAGTA          TAGGGGACACA TTT TGTGTTCCCTA          TTTTTAAAACTATAT 100 70
 JR441_08940 NONE
         frr 1710379 .. 1710415 +  -2.4  -3.29038   TACAATAGATAATAG    TGAAAAGACCCTCT CATGTTTAC AGGGGGTTTTTTTG    TTAATACTGTTGATT  43 53
 JR441_08950 NONE
        cdsA 1712066 .. 1712082 +  -6.7  -2.87026   TACTTTCTGCTTGCC              CTTTTTT CAT AAAAAAG              TCTAATATGAATATG  58 14
         dxr NONE
        rseP NONE
        proS 1716341 .. 1716363 + -12.1  -3.26188   ATAGAAATAATAGAA           GGTACCTCA TTGCC TGAGGTACC           TTCACTTATGATGTT  87 74
 JR441_08975 1720723 .. 1720745 + -13.6    -3.524   GTTCTAATATGGAAA           GCAGAATTTC TCA GAAATTCTGC           TTCTATGCATACATA 100 34
        rimP NONE
        nusA NONE
        rulR NONE
 JR441_08995 NONE
        infB NONE
 JR441_09005 NONE
        rbfA 1726080 .. 1726106 + -10.9  -4.42976   CTGAATAAAAAAAGA         GAGGATAGGCG TATAT CGTCTGTCCTC         TTTCTTCGTTTATAA  95 33
        truB NONE
        ribF 1728031 .. 1728049 +    -6  -2.52464   GGAAGCCATCCGTTA             TTTCAGCA ATT TGCGGAAA             TAACTTGCAACGCAC  54 4
        rpsO 1728488 .. 1728503 + -10.4  -5.36965   CGATAATCGTAAAAA              GCGGGA GGAT TCCCGC               TTTTTTATCGTATTA 100 35
         pnp 1730783 .. 1730804 +  -8.7  -4.66535   AATGAAAACATAAAA           GGAGCCTGGG AGA CCC-GGCTTC           TTTATTTTGAAGCTT  90 40
 JR441_09035 1731853 .. 1731863 +  -3.2  -3.64703   GAAGTAACAGATGAA                 GGCA GCT TGTC                 TTTGAATAGGAGGAA  52 34
 JR441_09040 1733121 .. 1733145 + -14.3  -5.19261   CGTCTTAAAAAGGAA          AGCCTGCTCCA TAA TGGAGCAGGCA          TTTTTTAATCCCTTT 100 33
 JR441_09045 1733495 .. 1733515 + -11.2  -5.71712   AGAAAACATCTGAAA            CATCGGCT GCCGG AGCCGATG            TTTTTTTATATGGAA 100 72
        dpaA NONE
        dpaB NONE
         asd 1736325 .. 1736358 +  -8.3  -3.08996   TTCTAAAGACGAATA     GAAGAGAGTAAGGC GCTATCA GCC-TGCTCTCTTC     TGTTACGTCCGAATA  67 52
        dapG NONE
        dapA 1738534 .. 1738565 +  -4.4  -4.71418   ACAGTGAAACAAACG      CGGTCATTCTCA CATTCAGC TGAGTTTGACCG       TTTCTTTTACATATT  68 52
 JR441_09075 1740361 .. 1740387 + -18.2  -5.37345   AGTATAATGACTGAC         TAAAGACCGGAG CTG CTCCGGTCTTTA         TTTTTTGTCCTTCAA 100 34
        tepA NONE
        tepJ 1741475 .. 1741493 +  -7.4  -4.38203   TCCTACAGAAAAAAT             GCAGCC TGTAAAC GGCTGC             TTTCTTCATTATGTA  79 86
     spoIIIE 1743891 .. 1743923 +  -4.8  -4.10164   TCAAAAGAGAAATAT      GATGAGCTCTCTTC TTAAT GAAGGGAGTTCCGC      TTTATGTAGTCGTCA  63 8
 JR441_09095 1744781 .. 1744800 +  -3.5  -5.95539   AAACGATTCTAAAAA            CGGACGC CTGTAT GTGTCTG             TTTTTTTATTTGCAC  88 29
        bcbE 1746118 .. 1746136 +  -5.3  -5.47399   AGAAAAAAACTTAGG            GACGGTCT AGCC AG-CCGTC             TTTTTTTGCGCTTCC  88 16
 JR441_09105 NONE
 JR441_09110 1748877 .. 1748898 +    -8  -4.82901   AAATCATAAACAAAA           CATCCCTC CAGTGT GAGGGGTG            TTTTTCTGCGGAAAG  88 32
        efpI 1749655 .. 1749668 +  -6.7  -3.13164   GCTGGCACTGCTGAT               CCGAA AATA TTCGG                TGTATAGTTTCTTTT  61 27
 JR441_09120 1749997 .. 1750014 +  -7.7  -5.63645   CACTCACTAGGAAGA             GAGGGGA TTTT TCCTCTC              TTTTTTATGTTTTCC 100 31
 JR441_09125 1750895 .. 1750905 +    -4  -4.66833   GATCAATCCGGGTTT                 TCAA GCT TTGA                 TTTTTAAAATTGGAA  66 8
        rodZ 1751836 .. 1751857 +  -5.9  -4.65916   TAAAAAGGAAGAAAA           GTCATCTTA ATTA TCAGATGAC            TTTTCTTCACGTCCG  76 16
        pgsA NONE
 JR441_09140 1753831 .. 1753844 +  -3.1  -3.86307   CGCTAAGAAAAAATC               CGAAT ATGC GTTCG                CTTTTTTCTTGGCAA  55 112
        recA 1754994 .. 1755012 +  -8.9  -5.63645   CAAATGATACAAAAG             GCTGAGT GAAAA ACTCAGC             TTTTTTGTATTTTGC 100 56
 JR441_09150 1756405 .. 1756421 +  -4.5  -2.80715   GTATTTCCGACACAT              TTACAAT GAA GTTGTAA              CATTTGTTTTTTTAA  48 124
         rny 1758142 .. 1758168 + -12.5  -5.40072   GTAGAGTATGCAAAA         TAAAGTGATGC GCTAA GCATCACTTTA         TTTTTTTGACGGCAA 100 23
        ymdB 1759153 .. 1759174 +  -5.9  -2.66711   AGCAACATCTAATAA           TGATTGTTC TAAT GAACACTCA            CTTATCCATTGTAAA  54 171
       spoVS 1759486 .. 1759514 + -16.9  -5.10877   CAAATAAAGCATTCT        CAACCTGTTTGCG TAA TGCAAACAGGTTG        TTTTTCATTTATTGT 100 44
         tdh NONE
 JR441_09175 1761971 .. 1761992 + -13.1  -4.52101   CAGCTATTGTAACAA           GAGGAAGAG TTTA CTCTTCCTC            TTTTGATTCCTTATT 100 29
        miaB NONE
        ricA 1764079 .. 1764101 +  -9.9    -5.243   GCTGTTCTCTCTAAA          CACGGTGCCT TAAC AGGC-CCGTG           TTTTTTCATCATTTG 100 27
        cotE 1764889 .. 1764919 +  -6.1  -5.49569   CTGAAGAATAAAAAA       GGGACTAGGGG AGACAGTAC CCCCAAGTCTC       TTTTTTATATTGATA  91 30
        mutS NONE
        mutL 1769505 .. 1769535 +   -20  -5.67967   TAGCGGGGGTGGTAG       GCATTGATCCATTC TCT GAATGGATCAATGC       TTTTTTTGTACTCCT 100 38
 JR441_09215 1771813 .. 1771847 + -10.9  -5.79595   GCACTAGTGCGAAAA    GCGATTCTTGTTGGGC ATGC GTCCAA-AAGAGTCGC     TTTTTTATTTTCAAA 100 42
 JR441_09220 NONE
 JR441_09225 NONE
        fabD 1773909 .. 1773922 +  -2.3  -3.02947   CCCAGCTAAAGCATT               TGCCC CTAT GGCCA                TGTATCTCATCAATC  42 32
 JR441_09235 NONE
        fabD NONE
 JR441_09245 NONE
        pksF NONE
 JR441_09255 NONE
 JR441_09260 NONE
 JR441_09265 NONE
        pksJ NONE
        pksL 1810788 .. 1810799 +    -3  -3.59979   GGCTTCTAAAGATAT                GTTT TGGA AAAC                 TTTCAAATAAGAGAG  48 4
        pksM NONE
 JR441_09285 NONE
 JR441_09290 1847817 .. 1847840 + -12.4  -4.32951   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT  93 37
 JR441_09315 1852530 .. 1852542 +  -3.3   -5.5762   TTATTTGCCAAGTGA                GGTTG TTC CTACC                TTTTTTGTCTTTCCT  79 103
 JR441_09320 NONE
 JR441_09325 1853968 .. 1853992 + -11.5  -5.47159   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GACCGTCTG          TTTTTTATCTTCAGC 100 32
 JR441_09345 1855607 .. 1855624 +  -2.7  -3.11768   AAAAAAAGGGCAAAA             TGGATAG GTGG TTGTCCA              TGTTGAATGCTATAA  45 59
        miaA NONE
         hfq 1856910 .. 1856935 + -13.9  -4.62783   TCAAGACATGAGGAA         AGGCTGCCGGG GGTT CCCGGCGGCCA          TTTTTAACATGAATC 100 57
 JR441_09360 NONE
 JR441_09365 1857708 .. 1857739 +  -8.8  -4.13963   AAAAAACGACACCCC      GAGTAGGATGAGAG ATGA TTCTCGTTCTGCTC       TCTTTTTTGGGCCCT  81 75
        nrdI NONE
        nrdE NONE
        nrdF 1861352 .. 1861372 + -12.7  -4.19238   TTTGAAGATGAAAAA            GAGCAGATA TAA TATCTGCTC            TTTTCGGCTTGAAGG  95 14
 JR441_09385 1862039 .. 1862065 +   -13  -5.60993   TCTTGAATAAAAAAA         CCCGGTTTCTCG TGA TGAGGAGCCGGG         TTTTTTTATGAGACG 100 31
       spoVK 1864468 .. 1864494 + -12.4   -5.2112   GCATCTGGATCTGCA         TAGACCTCTCAG TTT TTGAGAGGTCTG         TTTTTTGCTCGTATT 100 23
        hflX NONE
 JR441_09405 1867150 .. 1867160 +  -2.6  -4.11295   AGCAATTAATTTAAA                 TTTT TTA AAAA                 TTTCTCTGGATTTGA  55 27
        glnR 1867673 .. 1867685 +  -3.4  -2.98356   TTCATTAATCCGTTA                GCAA CTGTT TTGC                TATATACATTTACCT  45 33
        glnA 1869067 .. 1869093 + -11.6  -5.49569   GTATTAATCTCTCAA         TCCCTTGGCACT AAA GGTGTCAGGGGA         TTTTTTATGTTAATA 100 34
 JR441_09420 1869677 .. 1869698 +  -2.5  -4.10269   AAAGTAAGCCAATGG           TAAAATAAAG GTT CTTT-TTTTA           TTTAGTATTTCTTTG  55 23
 JR441_09430 NONE
 JR441_09435 1871057 .. 1871080 +  -3.8  -4.39002   GATAATAGTAGCTAA          TCTGTTGGTA CCCT TGCCAGCAGC           TTTTATAAAACGTTT  63 352
 JR441_09440 1874798 .. 1874824 +   -11  -4.01853   AAGCATATGAAACAA         GAAACCTACTTT TAA ACAGTAGGTTTC         TTTGTCGTGGTATTG  89 77
 JR441_09465 NONE
 JR441_09470 NONE
 JR441_09475 1881957 .. 1881970 +  -3.9  -4.14598   AGAGGGATGAAAAGG               GTTAA TCGT TTAAC                TTTGGTTTGCTTAGG  58 125
 JR441_09480 NONE
 JR441_09485 NONE
 JR441_09490 1883687 .. 1883697 +    -4  -3.02144   GAACGGAGACTTGCT                 TTCA ATA TGAA                 TGTTAGAAAAGCTGC  47 58
 JR441_09495 1883976 .. 1883990 +  -2.1  -2.63041   GAGTTTAAAATCCAT               TAGGC ATTAC GCTTA               TACATTGGTATTTTC  40 39
 JR441_09500 1884435 .. 1884445 +  -2.6  -3.56251   ATAAAGAGTTAGACA                 TAAT TCC ATTA                 TTATATGGATCTTTA  48 223
 JR441_09510 1887068 .. 1887079 +    -3  -3.57561   CAAAGTTTATTTGGA                TCAT ATTG ATGA                 TTTCAAGGCTTAAAA  48 1
 JR441_09515 1888804 .. 1888827 +  -8.2  -2.54896   CACTATTGAATAAAA          AAGCTCATCT TTAA AGATGAGCTG           TACATTCCATAAAAA  65 105
        xylA NONE
        xylB 1893533 .. 1893560 +  -5.5  -5.66229   TGTTTACACACAAAT        AACCCCCTCAC ATTGAC GTGAAGGGGTG         TTTTTTATTGTTACT  88 325
 JR441_09545 1896239 .. 1896255 + -10.9  -4.41895   TCAGAAAAAACAAAA              TCCCTCT GGT AGAGGGA              TTTTGATTCAGCATT  95 85
 JR441_09555 NONE
        dutA NONE
 JR441_09570 1900469 .. 1900498 +  -5.9  -3.16944   AATAAGATCCTCACT       TTATCTGCAAGTGC TTA GTATTTGC-GATAA       TATTGCATTCGTAAT  58 210
 JR441_09575 1901386 .. 1901405 +  -3.5  -5.40014   CAAGCTTTTATTTGA            GGTAGCG GTTTAA TGCTGCC             TTTTTATTGTTATTT  76 13
 JR441_09580 1902827 .. 1902847 +  -8.4   -5.4505   ATTTTATATAAAAAA            GATTAGCT ATAAA AGCTAATC            TTTTTTATTAAGAAG 100 40
 JR441_09610 1906262 .. 1906279 +  -9.9  -5.64873   GGGAAAAATAAAAAA             GAGAGAG ATAC CTCTCTC              TTTTTTATTCTTCGA 100 69
 JR441_09625 1907288 .. 1907310 + -13.6   -5.7946   TTGATTTCTTTAAAA           GCATGATGAA ATG TTCATCATGC           TTTTTTTATTGAGAA 100 97
 JR441_09630 NONE
 JR441_09635 NONE
 JR441_09640 1911408 .. 1911429 +  -8.1  -4.08693   GTAATGAATCCCAAG           GAAGAGAAGG AAA CCT-CTCTTC           TCTTTTTATGCATTT  79 37
 JR441_09645 NONE
 JR441_09650 NONE
 JR441_09655 NONE
 JR441_09660 1915010 .. 1915033 +  -6.6  -5.58522   AGAGAAAATAAAAAA          TGCACAGGCC AAAG GGCAGGTGCA           TTTTTGTTTTGTATG  93 30
        pghL 1915993 .. 1916017 +  -7.2  -3.51091   ATAGCTACTGAAAAA          TAGGAGGC GATAAGACA GCCTCCTA          TTCCTTATGCTTCTC  67 30
        fosB 1917585 .. 1917616 +  -9.5  -4.45485   CTTTTTTTGAACAAC      AAACCCCCTC-TCC GTAAA GGAAGAGGGGGTTA      TTTTATGCATCTGAT  91 504
        yneA NONE
 JR441_09690 NONE
 JR441_09695 1919703 .. 1919729 + -11.7   -4.2535   ACTTCACTAATATAA         GAGGAATACGG CAATA TCGTATTCCTC         TTTTGCATATACTAT  91 31
         tkt 1921880 .. 1921901 +  -8.8  -5.42164   AGTAAGCTTTTGAAA           GAGGATGA GTCAAA TCATCCTC            TTTTTCTTGTTTATC 100 36
        sirA NONE
 JR441_09710 1922812 .. 1922837 +  -9.2  -4.17023   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  85 65
        ccdA NONE
 JR441_09725 NONE
 JR441_09730 1924972 .. 1924993 +  -8.8  -5.63517   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        acnA 1929427 .. 1929453 + -11.7  -4.83169   CTGATGAATCAATAG         GAAGAGAAGGC ATTTC GCTTTCTCTTC         TTTTTATGACACAAT 100 37
 JR441_09760 1929985 .. 1930005 +  -6.2   -5.9873   GAAATGGAACGAAAA            CTGGATCT TGATT AGATTCAG            TTTTTTTTATGCTCA 100 11
 JR441_09765 NONE
        sspN NONE
         tlp 1930709 .. 1930722 +  -8.1  -6.02919   ACCGTTCTTAAAAAA               CCAGG GAAA CCTGG                TTTTTTTCTTTCTGA 100 30
 JR441_09780 NONE
 JR441_09785 1931526 .. 1931546 + -14.1  -5.54885   TCATTTGTAAAAAAA            GAACGCACA TGA TGTGCGTTC            TTTTTTATTGGTATT 100 31
 JR441_09800 1933095 .. 1933126 + -14.7   -5.0925   AATAGGTGCAGAACT      GCAAAAATCCTTG TAAATT CAAGGATTTTTGC       TTTTTAATTTTAAGA 100 36
        parE NONE
        parC 1937876 .. 1937914 +  -8.5  -5.28826   CATACAGAACAATAA  TAAA--AAACCCGCTCATA CTA TATGAGCGGGTTTCGTTTG  TTTTTTATCAGCTTT 100 26
 JR441_09820 1940352 .. 1940376 + -15.9  -4.99435   TAAATATAAAACAAA          GCTGCATTCAA TAG TTGAATGCAGC          TTTTTCATTATTGGA 100 43
        eglS 1942152 .. 1942173 + -10.2  -4.95758   TTAAGCTTTTTTTGG           CGGACATC AGTAAC GATGTCCG            TTTTTATCATCTAAT 100 41
 JR441_09830 1942501 .. 1942545 +  -5.2  -4.93079   ATTTCAAAATTTCAA TTTCTGTCTCACTAACTTAAG TATA CTTT-GATATTGAGACAGAAA TTTATTTATTTTGTT  76 60
 JR441_09845 NONE
        galU NONE
 JR441_09855 1948307 .. 1948341 +   -13  -5.63103   ACGATAGCTAGCAGA     TATGCATAGGGGTG ACTGACG CTCCCCTATGCATA     TTTTTTTACTTCCGA 100 34
        iseA 2003196 .. 2003214 + -10.2  -5.74086   GTTATATAAGAATAA             CGCCCGGT ATA AGCGGGCG             TTTTTTATTTGGTTT 100 32
         ggt 2006457 .. 2006481 +  -7.9  -5.19212   AAATAAATTAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCTGAT  93 35
 JR441_09990 2008591 .. 2008618 +   -15  -3.35616   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 31
        gltC 2015761 .. 2015787 + -11.7  -5.61596   CAATAAAAAAATGAA        CCCGA-GCTTCT ATAT AGAAGCTTCGGG         TTTTTTTCTGCAAAT 100 35
 JR441_10030 2019797 .. 2019839 +  -3.4  -4.56775   GCAGATAAGGATGAA TGAGATCCCGTTGTTACGAT CAG AATGGACAAATGGGATCTCA TTTTTCGAGGAGGCT  64 33
 JR441_10035 NONE
 JR441_10040 2021196 .. 2021221 + -11.3  -2.87931   TACTCTATTGTGAAA         CCAAGAGAATG ACGG TATTCTCTTGG          TCTGTGCCACATCCC  79 14
 JR441_10060 NONE
 JR441_10065 2027872 .. 2027904 + -14.2  -3.23047   GAATAAAACAAATCT      GAGGAGAGCGAGAT TCATT GTCACGCTCTCCTC      TCTTAGCTTTATGGA 100 35
 JR441_10080 NONE
 JR441_10085 2029696 .. 2029709 +  -4.5  -4.03586   GATGTAAGCTGTTGA               GTTGC CGCT GCGAC                TTCTTGTATTTGAGA  61 349
        hpaB 2032957 .. 2032976 +  -7.1  -4.20024   AGAACATTGAAAAAA            CAGCGGG AAAAGA TCCGCTG             TTTCGTATTTTTTAT  75 31
 JR441_10110 2035851 .. 2035879 + -13.1  -3.34357   GCTACTGATATAAAA        GAGGCCCTGCGTT AAA AACGCTGTGCCTC        ATTTTATACTTATAG  95 33
 JR441_10115 2037126 .. 2037139 +  -3.1  -4.99645   TCTTTCATCTTACAT               GAAGG TCTT CTTTC                TTTTGTTTATCCAGT  70 368
 JR441_10165 NONE
 JR441_10170 NONE
 JR441_10175 2045014 .. 2045024 +  -8.2  -3.68738   CTTGACAAACTCATG                 CGCC GCC GGCG                 TTATCTCTTCAAATG  69 181
 JR441_10185 2046981 .. 2046992 +    -3   -5.4756   CGTTTAGGCTGGTGA                GAAT CTAG ATTC                 TTTTTTATTACCATT  77 180
         bla 2049525 .. 2049546 +  -9.5  -4.00042   CTTTTTTAACCCCTA           CCGTTCATT TTTT GATGAACGG            TTCTTTCATAGGACC  83 77
 JR441_10215 2051244 .. 2051259 +    -9  -5.25799   GTTTAAATTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT 100 35
 JR441_10245 2057796 .. 2057811 + -11.8  -3.06862   ATTAAGCAGATCCAA              GCCCCC ATAT GGGGGC               GTTCTTATTATTGTA  83 36
 JR441_10265 2061316 .. 2061347 + -17.5  -3.20382   AATTCAGAATATATA      GTGAAGCTGTTGG AAAAGC CCAACAGCTTCAC       TTAATAGGTGTCAAA 100 124
 JR441_10300 2071038 .. 2071048 +  -3.2  -2.57132   TTTGTACTGAAGGAA                 GTAG AAA CTGC                 GTTGTAAAAAGGGGG  43 8
 JR441_10305 2072025 .. 2072050 +  -8.3  -4.11751   ATGAAACTTACGACA         GAAGTCCTGCA TAAA TGCAGAGCTTC          TTTTACGAAATTAGT  79 12
 JR441_10325 2077675 .. 2077697 + -16.4  -5.55698   CCTCAATACGCAAAA           GACGTTTGCC TTA GGCAAACGTC           TTTTTTTGCGTTATC 100 242
       csk22 2083235 .. 2083274 +  -2.2  -4.68994   TACAATAAAGAAAAA  GACATCCTTGC-CCGCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  61 8
 JR441_10375 2084490 .. 2084525 + -13.5  -3.36515   AGTCTATCAATTTAC    TGACAAAAGCCCAAA AATGAA TTTGGGCTTTTGCCA     TGTTTACACGTAAAA  95 42
 JR441_10390 2087097 .. 2087107 +  -5.4  -3.85698   CGATATAACCGCTCT                 TTGC AAC GCAA                 TTTATCGAAAAACGG  63 436
        desE 2088955 .. 2088984 +  -9.4  -5.29445   ATGCCTGATGATAAA       GGAGGTCTTCTA ATATAC TAGAAGGCTTCC        TTTTTATTGTTGGAG 100 33
        desK NONE
        desR 2090802 .. 2090825 + -13.2  -5.08601   GGTTTAAATAAAAAA          GGATCTTGGC ATCT GCCAGGATCC           TTTTTGTTAACCTGA 100 30
 JR441_10445 2097121 .. 2097137 +  -5.1  -3.67296   ACAATATCCATGCTC              GGAAATG AAG CATCTCC              TTTCCCTCGCTGATC  57 316
 JR441_10455 NONE
 JR441_10460 2097862 .. 2097891 + -13.7  -5.03994   AACAGTGTGGTGTAA       TAAGAACAGGGCG CACA TGCCCTGTTCTTG        TTTTTATATATAAAA 100 26
        dhaS 2100584 .. 2100600 +    -8  -6.04953   TGTATGTTTAAAAAA              CTGCTG CCTGC CAGCAG              TTTTTTTCTTTCTGT 100 43
        sqhC NONE
 JR441_10485 2103416 .. 2103430 +  -3.4  -4.09864   AAAAAGCCCCCTTTC               CTCGGG GGC TCCGTG               TTTTAAAAAATCCCT  57 41
 JR441_10495 2105969 .. 2105996 +  -8.5  -5.59534   AATATGCATCAAAAA        AGGTACATCAC TTTATC GTGATGTACCC         TTTTTTATTATCCTT 100 40
 JR441_10540 NONE
       rsbRC 2120108 .. 2120132 + -13.7  -4.90869   CTTAAAATTAAAAAA          GGTATAAGGCT TAA GGCCTTATACC          TTTTTGATTAATCAT 100 19
        gerT 2122986 .. 2123008 + -14.9   -5.5112   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 30
 JR441_10585 2125453 .. 2125476 + -11.1  -5.53991   CCACAAAAAAAAGAA          GAGAGAGCT CCAAGA AGCTCTCTC           TTTTTTTCATAAATG 100 53
 JR441_10595 2126894 .. 2126918 + -14.4    -5.626   TAAGGATATGAAAAA          CCTTAGTCCG AAATC CGGACTAAGG          TTTTTTTATACAATC 100 38
 JR441_10610 NONE
 JR441_10615 2130333 .. 2130355 + -17.8  -5.89947   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 31
 JR441_10625 NONE
 JR441_10630 2132993 .. 2133017 + -12.2  -4.69549   ACCAGACACAATGAA          GCCCGCTTAT CTAGT GTAAGCGGGC          TTTTCATTTTAAATT 100 63
 JR441_10645 2134966 .. 2134991 + -16.3  -4.53636   AGCCTTAAAACTGCA         GAAAACTGCGG GTTT CCGCAGTTTTC          TTTTCATTATGTCGT 100 33
 JR441_10665 2136901 .. 2136930 +  -2.9  -4.18018   TTCTGTTCTATGGCC       GATAATGCGAAAG AGTT CTTTTCCATAATC        TTTTACATAAACAAC  58 427
        cgeA NONE
        cgeB 2148498 .. 2148517 +  -9.4  -5.84381   CGCTTTCTTGAAAAA            TCGTTCAT TGCT ATGAACGA             TTTTTTTATTCATAG 100 30
 JR441_10755 2151107 .. 2151135 +  -9.6   -4.6526   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACACTTTAT  91 29
 JR441_10770 2152679 .. 2152704 + -10.5  -4.12902   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC  89 32
 JR441_10810 NONE
 JR441_10815 2160008 .. 2160028 + -12.6  -5.61596   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTTATGCACGT 100 39
        metA 2170485 .. 2170497 +  -3.3   -4.0342   ATAACTCCTTACGAT                GCATG AAG CTTGC                TTGTTGTTGATTACA  57 213
 JR441_10880 2171689 .. 2171711 + -12.8   -5.4659   TAATGGCGTACTTGA           GAGCATACGA AAA TCGTGTGCTC           TTTTTATTTATATTC 100 38
 JR441_10885 NONE
        cspD 2172152 .. 2172171 + -13.6  -3.71107   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 58
 JR441_10900 2172769 .. 2172809 + -17.9  -2.84098   TCAGCTGGATGAATT  CAAAGAATAAAAACCGCAG CTT CTGCGGTTTTTATTTTTAG  TGATTGGTTAAGACA 100 16
 JR441_10915 NONE
 JR441_10920 NONE
        sspL 2174991 .. 2175032 +  -9.6  -3.05597   CAAAAAAAAGCAATA CAAAACGCTAGAGAAGATC TAAAC GATCT-CTCTAGCGTTCAG CTTTTCAAGCATACG  74 15
        kduI NONE
        kduD 2191475 .. 2191494 + -12.2  -5.16572   TGACAAATAAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 38
 JR441_11020 2194066 .. 2194088 +  -9.2  -4.97402   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC 100 52
 JR441_11070 2202004 .. 2202028 + -14.5  -4.61566   CTTTCCAAAAAATAA          GCATGAATGAA CGA TTCATTCATGC          TTTTATCATTTAAAA 100 16
 JR441_11080 2202814 .. 2202840 + -12.4  -3.13382   CTATAAAAACGAAAA         GAAGACAGCC TTTTACC GGCTGTCTTC         TCTTGCAATTTCATC  87 52
        sspM 2203789 .. 2203818 + -11.7  -5.41143   AACCGCCCTTCTACG       T-AAGAAGCAAGGA ATT TCCTTGCTTCTTTA       TTTTTTTAGCCACTG 100 23
        recU NONE
 JR441_11110 2208220 .. 2208242 +   -12  -5.14563   AAATTAAACAAAAAA           GCCGTCACCT TTG GGGTGATGGC           TTTTTTGGTACACAA 100 34
 JR441_11205 2225910 .. 2225927 +  -4.1  -4.18908   TCATTCCATTTTTCA             TGAAAGC TTGT GCTTCCA              TTCTTTTGGACATCT  62 410
 JR441_11390 2257591 .. 2257615 +  -9.4  -4.64846   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG  91 34
 JR441_11480 2274037 .. 2274052 + -10.4  -5.68438   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 41
 JR441_11490 2276717 .. 2276736 + -10.8  -5.97979   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 35
 JR441_11570 2291422 .. 2291445 + -16.8  -3.60395   AACGCAGAAAAAAAA          GCAGAGGCTG ATGA CAGCCTCTGC           TTAATTATTGTATGA 100 15
 JR441_11610 2297486 .. 2297497 +  -3.6  -4.09508   CTTTGATAATCCCGT                GCCG GTTG TGGC                 TATTTCTTTTTGTCC  58 106
 JR441_11635 2299340 .. 2299359 +  -3.5  -5.45652   ACCTGGTTTTGCCAA            CCGCC ATCAGCACTC GGCGG             TTTTTTATTGAACAT  79 82
 JR441_11645 2300993 .. 2301010 + -12.7  -4.91657   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 31
        ansR 2321394 .. 2321415 +  -3.1  -3.11761   AAAGTACAGGAGGAA           C-TGAGTTAA TCT TTAGCTCACG           GTTTAATTTTACCGT  47 17
 JR441_11780 NONE
 JR441_11785 2324317 .. 2324338 + -12.3  -4.69415   CTCATAGCAGAAAAA           CCAGCACCT GTAC GGGTGCTGG            TTTATTTATATTGAT 100 34
 JR441_11795 2325648 .. 2325673 +  -9.8  -5.47159   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 30
 JR441_11835 2330257 .. 2330270 +  -9.5  -3.27525   CTGTCAGTTCTTTCA               GCCGC TGAT GCGGC                TTCCCTTTGAAAACA  75 49
 JR441_11840 NONE
 JR441_11845 2332304 .. 2332351 +  -5.6  -2.85361   AATGCCCGTCTCCTC CGGCAAAAGGATGCC-TGTCTCG GTA CAACACACGATAGCCTTTTGCCG TCAATTTTTCGGTCA  51 99
        proC 2338070 .. 2338090 + -14.1  -5.93252   GATGTAAGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 40
        namA 2340951 .. 2340974 + -12.6  -6.20267   TGGTAATGCCCATAA          GAGATATCCT GTAG AGGATATCTC           TTTTTTTATTTTTAG 100 35
 JR441_11890 2342027 .. 2342039 +  -6.3  -4.77165   CATCTCCTTATAAAG                CGTAA TGA TTACG                TTTTATTATACAACG  78 240
 JR441_11905 2344720 .. 2344747 + -13.6   -5.0538   AATAAGAAGAAAAAA        GCCGAAAATGTT TACA AGCATTTTCGGC         TTTTTTACGCTGAAC 100 39
        mifM NONE
        yidC 2348816 .. 2348841 + -11.2   -5.5604   GGTGAAATAAAAAAG         CAACCCCGCGC GAAAA GC-CGGGGTTG         TTTTTTGTTACTTGC 100 31
 JR441_11930 2349720 .. 2349754 +  -8.7  -6.34616   AGGAAATGGAGCTAA    AAAAACCCGA-TGCGG GAAA TCGCACTCGGGTTTTC     TTTTTTTTATTTTGC 100 26
      prli42 2353305 .. 2353315 +  -2.4  -3.35342   CCAAGCGGGTTGTCA                 GGAG ATC CCCC                 TTCAATATTTTTCTT  45 316
 JR441_11985 2358677 .. 2358693 +  -4.3  -3.07962   TGCAAATCCGTTGAC              TCTCCCC TAG GAGGAGG              TCTTACAGTATAAGG  50 66
         bmr 2359910 .. 2359946 + -19.7  -4.12254   GCCAGCACGTGATAA    GAAGCGCATTCTTTGTG TAC TGCAAAGAATGCGCTTC    TTCTTTATACTGATG 100 29
        bmrR 2360833 .. 2360863 +   -10  -4.12448   AATCATAGAAAAAAA       GCATTTTTTGAA ACAAAAC TTCAAAAAATGC       TCTTTTTGCTTATTT  86 43
 JR441_12040 2371345 .. 2371362 + -12.7  -5.83226   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 36
 JR441_12090 NONE
 JR441_12095 2381645 .. 2381684 + -16.6  -4.07526   CTTATAAAGATTAAT  GTGCAAAAGACTGCCGAA ACGA TTCGGCAGTCTTTTTCCC   TTTATATAAATAGTT 100 27
 JR441_12235 NONE
 JR441_12240 2406569 .. 2406587 +  -8.9  -6.19302   CTGTCCGTCTTTTAC             CTAGCTC AATCA GAGCTAG             TTTTTTTTGTTGTGT 100 66
 JR441_12260 2409468 .. 2409488 + -14.1  -5.48623   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 32
 JR441_12280 NONE
 JR441_12285 2416374 .. 2416396 +  -4.2  -3.41229   CATTCGACATCATTC           TCGTTTTTTT TGA GAAAATACGA           TTATAATAAAGGTAT  53 50
 JR441_12290 NONE
        sinR 2417066 .. 2417100 + -13.8  -4.42386   AGAAAATCCCAAAAA    GAGGAGT-AGTGCCT GAGCAG AGGCACTAACTCCTC     TTTTGTCAATAACCA 100 17
 JR441_12315 2419926 .. 2419961 +  -8.5  -4.46835   ATATTAGAAGAATAT    C-AATAAGGTCCTCCA TTTTT TGAAGGACCTTATTCG    TTTATTTGCGGTTAT  86 20
 JR441_12370 2426991 .. 2427019 + -11.1  -2.80821   TAGAAGTTAAAAAAA        GCTGAATAGCC CGTGAAA GGCTGTTCAGC        TGCTATCTTTCAAGA  79 21
 JR441_12380 2428065 .. 2428104 +  -7.9  -4.77036   TGAACAGGTGAAAAA  CCGAAGACAAGCTGATT CGAATA AATCAGCGGATCTTCGG   TTTTTCATCATGCAG  88 41
 JR441_12390 2428979 .. 2429003 +   -13  -5.44119   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA 100 35
 JR441_12400 2429977 .. 2429998 + -13.1  -4.97405   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 28
 JR441_12465 NONE
 JR441_12470 2441273 .. 2441289 + -12.3  -5.52384   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 31
 JR441_12520 2451664 .. 2451683 +  -4.2  -5.20781   GCTGCTGTATAAACC            GAGGCTGC ATTC GAAGTCTC             TTTTCTTTTGTCATG  76 29
 JR441_12525 2452093 .. 2452103 +    -4   -3.9009   TCGGCGAAGACACTG                 TTAC AAT GTAA                 TTTGTAAAATAAATT  56 64
        ispG 2453297 .. 2453333 + -16.2  -3.02511   AATTAAAAGAAGAAA   CACAAAAAGCTTGACGG GAAC CCGTCAAGCTTTTT-TG    TGTTAGAAAAATGGA 100 12
 JR441_12540 2454437 .. 2454469 +   -15  -2.91429   ATACGTGTCAATAAC      TGAAAAAGGAGCCC AAACC GGGCCCCTTTTTCA      TATATACGCATTTTA 100 23
 JR441_12555 2456306 .. 2456337 + -14.7  -3.27766   AAACAATTTACAAGC      TAAAAAATGGGGG TGTTAT CCCCCATTTTTTA       TTGCTGTAAAATCTT 100 23
 JR441_12570 2459518 .. 2459533 +  -6.1   -5.1167   GAATGCAAGAATAGA              GCCGT TTGATT ACGGC               TTTTTATATTGCCTT  83 86
 JR441_12575 2460521 .. 2460541 + -11.2  -5.61596   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 22
 JR441_12705 2484768 .. 2484782 +   -10  -2.83271   TCATCCTCAACCACA               CGGACA AAC TGTCCG               TCGTTGTAAGGATAA  71 107
        rpsT 2499135 .. 2499156 + -10.9  -5.77856   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 34
 JR441_12785 2500562 .. 2500583 +  -8.7  -5.31059   AACAGCGACTGCCCG           GGCTGCTGA TTTC TCGGCAGTC            TTTTTTAGTTCGTCT 100 39
 JR441_12805 2505138 .. 2505159 + -11.7  -5.04601   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 83
 JR441_12850 2510902 .. 2510912 +  -5.4   -4.3739   ACATGTGAAGCGCCT                 CCTT AAT AAGG                 TTTTATAACAGCCTA  70 268
 JR441_12865 2513510 .. 2513535 +  -3.9  -5.71712   GAAGGTGCCAAAAAA         ATAAGGAGGCT TGTT GGCCCCCTTAC          TTTTTTTCTGTCGCA  85 22
 JR441_12875 2515405 .. 2515424 +  -9.3  -4.24413   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTATTACTGCA  86 31
 JR441_12935 2526779 .. 2526796 +  -4.1  -4.94222   AAGACAAATAAAAAA             GGAACTC ATTT GAATTCC              TTTTTATAACTTATT  72 525
        rapE NONE
        phrE 2530436 .. 2530451 +    -9  -5.42164   TTCTGTTTCCCTTTA              GCCGTT TCAT AACGGC               TTTTTCTTATTTCTA 100 59
        yqcG NONE
        yqxf 2533257 .. 2533283 + -13.8  -5.04868   AGAAGAGTCACTTTA         TAAGCCCCTCTC AAT GAGAAGGGCTTA         TTTTATTTAATTTGA 100 53
 JR441_12985 2533789 .. 2533810 +  -3.7  -5.97575   GTTGGACTAACCTTA           GTTGAAAAG CCTG CTTCTCGAC            TTTTTTTTCTAGGTT 100 321
        sknR 2568808 .. 2568824 +  -3.7  -5.51353   TGAATCCTTTACAAA              CCCTT ACGTGAC AAGGG              TTTTTGTTGTTTTTC  81 153
 JR441_13250 2571195 .. 2571230 +  -8.4  -3.95042   AAGGGGAAATGATTT    TGGAAAAAGCCGGA TCTCATAT TCCGGCTTTCTCTA     TTTCATTAAAGTTTT  77 427
 JR441_13265 2574331 .. 2574355 +  -2.1  -4.96848   TTGGAAACCATAACG          TCCATTTCTTC TAT GATGAGATGAA          TTTTTCTGTAAGAAA  66 441
         blt 2584864 .. 2584884 +  -5.3  -3.86307   TGAAGATAATAAAAA            CGGACGAGT CTG GCTTGACCG            ATTTTTTATTGACGA  63 415
        czcR 2589038 .. 2589064 +  -6.7  -2.94454   TTCACGCAAAAAATA         GAGCAGTAA ACATGTGAG TTACTGCTC         TGCTTCGTTTATTCA  60 111
        gltR 2593144 .. 2593166 +    -7  -5.16071   GTATAGAGCAAAAAA           GCAAACTTCG GTA TGTAGTTTGC           TTTTTCTTCGTGATT  90 124
 JR441_13440 2604323 .. 2604345 +  -3.5  -6.17184   TTGATAGAGCAAAAA           GCAAACT TTGACAGGC AGTTTGC           TTTTTTTTTCGTAAT 100 51
        murI 2605567 .. 2605591 +   -10  -4.46212   GGAAACATGAACTAA          GAAGCGGGCT GAAAA AGCCCACTTC          TTTTCTAATAAACAA  91 148
 JR441_13450 2606667 .. 2606683 +  -7.9  -5.38497   TCGATAGTCTTAAAG              GGGGCTT AAC ATGCCCC              TTTTTTCATTTCAAT  95 82
 JR441_13455 2607288 .. 2607318 + -11.3  -5.52096   TTACCTCATATCCAT       CAGACGCCATAAG AAATC TTTATGGTGTCTG       TTTTTTATTAGATTT 100 50
 JR441_13475 2610374 .. 2610398 +    -8  -4.12188   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCGTGC  76 90
 JR441_13490 2614339 .. 2614359 + -11.3  -4.29845   TACTGCAAATAAAAA            GATACCAAT ATC ATTGGTATC            TTTTAGATTGAGTTC  90 233
 JR441_13500 2615950 .. 2615973 +  -8.2  -4.65895   ATAAACAAAACGGAA          GCACTGATAA AAAA TCATCAGTGC           TTTTTACATGGCGAG  88 37
 JR441_13505 2617201 .. 2617227 + -12.4  -3.22298   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG  87 330
 JR441_13530 NONE
 JR441_13535 NONE
 JR441_13540 NONE
 JR441_13545 NONE
 JR441_13550 NONE
 JR441_13560 2622612 .. 2622631 +  -9.4  -4.14004   TTAAAAAAACCCTTG            CCTTAAAG CAGA CTTTAAGG             TTTATCGTTATGTTG  85 49
        adhA NONE
        yraA 2624419 .. 2624443 + -12.2  -5.09426   AAAATAAAACGAGAA          GGCACAGACT GTTCA GGTCTGTGCC          TTTTTTAACATTAAG 100 34
 JR441_13610 2634364 .. 2634388 + -10.1  -5.07275   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 42
 JR441_13620 2636091 .. 2636115 +   -13  -5.64274   CTCTTACCCCAAAAA          CAAGGCTTGT ACAAA ACAAGCCTTG          TTTTTTTATGCATAA 100 51
        sigV 2636744 .. 2636758 +    -5  -3.18264   GCGCATTCAGTTGAC               GAAGGA GGA TCTTTC               TTAATGGATAAGAGA  53 7
 JR441_13630 2637948 .. 2637972 +  -9.2  -3.60884   TTTTCGGGATTTTTG          GGTGCGCCGC ATTCG GCGGCTTACC          TTATGATCTTTTCCA  78 354
 JR441_13640 2640257 .. 2640279 + -16.4  -4.90471   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 237
        fdhF NONE
 JR441_13685 2651060 .. 2651082 +  -9.9  -5.84381   AAAATAACAGAAAAA           CAGCCATCG CTTGA TGATGGCTG           TTTTTTTATTCGTCG 100 34
 JR441_13715 2655286 .. 2655318 + -19.3  -4.75954   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT GTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 28
 JR441_13785 NONE
        glnH 2670340 .. 2670366 + -10.9   -2.8372   GAATAACAACCATCC         CGGGATGAGCA GGTGA TGCTCATCCCA         ATTTGATAAGGAGTG  79 35
 JR441_13795 NONE
 JR441_13800 2671719 .. 2671740 + -11.7  -4.74103   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 30
 JR441_13845 2680010 .. 2680030 + -14.1  -4.94222   AAAATAAAACAAAAA            CAGCCTTGA TCA TCAAGGCTG            TTTTTATGCATTATT 100 34
 JR441_13875 2686454 .. 2686469 + -10.4  -6.09196   CTTCCAATAAAAAAA              GCTGCC TTTT GGCAGC               TTTTTTTATTTTGAA 100 31
       spoVB 2697846 .. 2697861 +  -3.2  -3.76778   CATCAAAATTATAAC              GCTGTG ATTT CATGGC               TTCTTCGTCAATTTT  53 352
 JR441_13930 2698759 .. 2698804 + -14.2  -3.01416   GGGGAAACAGGTCTT CCACATAAAAAAGAGCGGGC TCACTT GCCCGCTCTTTTTTGTTTGC TATGTATAGCTCCTG 100 18
 JR441_13980 2707153 .. 2707196 +   -14  -5.42514   AAAAGAAAATATTCT TAAATCAAAAAGGCAGCCGC ACAA GCGGCTGCCTTTATCATGTA TTTTTTACTTTCTGA 100 23
 JR441_13990 NONE
 JR441_13995 2708007 .. 2708029 +  -9.1  -5.93252   GCCTCTGTAGAAAAA           CGCAGCGTA GTCGA TACGCCGCG           TTTTTTCTTTTTCCC 100 31
 JR441_14000 2709631 .. 2709655 +  -8.5  -5.24531   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT 100 37
        nifS NONE
 JR441_14040 2717818 .. 2717831 +  -8.1  -5.38249   TAAAGACTAAAAAAA               GCCCT CTAG AGGGC                TTTTTTATAATTGGT 100 31
 JR441_14065 2721399 .. 2721420 +  -5.8  -5.12617   ATATTGCAAAAAAAA           CTCCAGTC ATCATC GACCGGAG            TTTTTTGAATCATTA  83 112
 JR441_14150 2736533 .. 2736545 +  -4.9  -5.55695   AAGACGTGGACTCGT                TTTCA GCC TGAAA                TTTTTTCTCTTGTTC  88 61
 JR441_14195 2746413 .. 2746446 +    -7  -5.53991   AATCTATACGATAAA    T-A-AAACCGGTAGAG GATT CTCTACCGGTTTATCA     TTTTTTTGATCGCTC 100 27
        cotQ 2764687 .. 2764710 +  -4.6  -5.37593   TAAAGAAAATCTCAA          G-GGCCGAA CAACGAT TTCGGCCTC          TTTTTTGCTTTCAAG  81 38
 JR441_14270 2765308 .. 2765344 +  -6.1  -5.80817   AGACGGCTTTATAAG   GATAGATAAGTGCAGG GGAAGG TCTGT-CTTATCTATC    TTTTTTTATATTCAC  93 40
 JR441_14275 2766323 .. 2766347 +   -13  -5.50723   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 50
 JR441_14340 2776021 .. 2776063 + -18.1  -2.71364   ATGAAAGACCCAGTG TAATCAAAAAGGCGGTGACT GCAT AGTC-CCGCCTTTTTGATTG TCATTACACAGCTGA 100 23
 JR441_14415 2793524 .. 2793545 + -13.1    -5.252   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 32
 JR441_14430 2797547 .. 2797579 +  -8.3  -3.09823   GACTGAGGGATCTCC      TGGTAAGGCGCTCCG TTT TGCAGCGCCGTGCCG      TATACTTTTACGCCC  66 267
        sspI 2798462 .. 2798479 + -10.5   -5.9218   GAATAAGACATGAAA             CCGGGTG ACAG CGCCCGG              TTTTTTTCTTATATA 100 35
 JR441_14445 NONE
        glcD NONE
 JR441_14455 2802478 .. 2802502 + -13.7  -4.50943   AAACATCATGAGAAA          GCCCAAAACAG ATA TTGTTTTGGGC          TTTTGTGCGTTATTC 100 30
        ysdB 2818422 .. 2818448 +   -16  -4.87665   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 11
 JR441_14550 2821022 .. 2821042 + -12.6  -3.41602   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG  93 36
 JR441_14575 2825760 .. 2825809 + -16.2  -5.15969   TGTTTCCTATATTAG AGAAATAAAAAAGCATGATCTC TTCAAT GAGATCATGCTTTTTTATTTTA TTTTTTCGCTTCAGC 100 18
 JR441_14625 2836543 .. 2836561 +    -3  -4.07568   AATGGAAAAACGAGA             TCGGCAGG AAG CCTGACAA             TTTTAAAGGAGGAAA  55 10
 JR441_14630 2837437 .. 2837457 + -14.1   -5.1925   TAATGGCAAAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGAATTATGC 100 38
        ytvI 2850830 .. 2850855 + -12.6  -5.68438   TCAGCAAAAATAAAA         CGGCAGCCGT TTTTTC ATGGCTGCCG          TTTTTTATTTGATGA 100 28
        ytrH NONE
        ytrI NONE
 JR441_14735 2862439 .. 2862461 +  -8.5  -2.73829   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  65 26
 JR441_14745 2863825 .. 2863853 +  -7.5  -3.96483   GCTGAAAGAGATCAC       GCGTAAGGGGCG CCTGAA CGTCCCTTA-GC        TTCTTTCCATCAGCT  74 20
        ytlI 2876427 .. 2876452 + -11.9  -3.63968   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG  90 41
 JR441_14885 2888640 .. 2888652 +  -4.8  -5.60864   TCATATACAATCTGG                CCGT TAATC ACGG                TTTTTTTAATCTCTA  93 82
        brnQ 2896192 .. 2896213 + -13.7  -4.46212   GTTAATGTCACAGAA           CGCCTGCGT TATT GCGCAGGCG            TTTTGTAATGAAAAA 100 36
        hisJ 2899151 .. 2899171 +  -8.3  -4.99861   AAAATGAGGCAGCGG            CAGCGTTAA ATA TTCACGCTG            TTTTTCTCCTTCCTC  91 208
 JR441_14935 2900214 .. 2900238 + -10.1  -6.17669   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT 100 33
        rpsD 2902893 .. 2902915 + -12.6  -5.69473   TAATCGTTTTAAAAA           CCCCTGCCGC TAT GCGGTCGGGG           TTTTTTTATCGTCTG 100 38
        acuA NONE
 JR441_14965 NONE
 JR441_14970 2909116 .. 2909135 +  -8.6  -5.31158   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTTA 100 30
 JR441_15040 2921754 .. 2921789 +  -4.7  -4.37886   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  68 33
 JR441_15050 2923372 .. 2923395 + -12.4  -5.60689   ACAAGCAAAAAATAG          AAGCCGCTGC CCAC GCAGCGGCTC           TTTTTTATTATATCG 100 47
 JR441_15070 2927399 .. 2927418 +  -9.3  -4.12188   TGCCGTACATGCTCA            GCCAGCT CTCCCA AGCTGGC             TTTTCGACGTAGTGG  80 196
        cysK 2933933 .. 2933968 + -15.6  -4.10161   TGGTCATTTATTTAA    AAAAAGGACTGGCTTC AGCA GAAGCCGGTCCTTTTA     TTTTGCAAGCTCGTA 100 26
        pbuO 2936768 .. 2936787 + -12.2  -5.36441   GGATAGACCAAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 41
 JR441_15125 2939262 .. 2939282 + -12.6  -4.94902   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 120
 JR441_15140 2943155 .. 2943169 +  -8.5  -3.78124   TGCAGGGCTAAATGC               CGGGC AATAC GCCCG               TTCTTAATCATTACT  74 4
        opuD 2944910 .. 2944935 + -16.3  -5.28942   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 33
 JR441_15180 2952311 .. 2952335 +  -9.4  -4.67556   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAATGTTAT  91 30
 JR441_15235 NONE
 JR441_15240 NONE
 JR441_15245 NONE
 JR441_15250 NONE
 JR441_15255 2968731 .. 2968752 + -10.2  -5.52347   GAATACAAATAAAAA           CTAGGGGA CTGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 29
 JR441_15275 2973576 .. 2973620 + -19.7  -4.12902   GGGATCTTTCAGATT GTTGACAAAATCCTAAAATGG ATT TCATTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 61
 JR441_15285 2975913 .. 2975931 + -13.2  -5.19879   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 33
 JR441_15350 NONE
 JR441_15355 2988079 .. 2988103 +  -9.4  -5.67283   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
 JR441_15370 2990776 .. 2990792 +  -4.4  -4.86001   GAGCACACACAAAAA             GAGC-CC GCTG GGAGCTC              TTTTTGTCAGCTGAT  71 248
        pckA 2997669 .. 2997698 + -13.7   -4.4078   CTCGTATAAAAAACA       AAAGCCAAGAGCA ATTA TGCTCTTGGCTTG        TTTTAATTGACGGAA 100 32
 JR441_15405 NONE
 JR441_15410 NONE
 JR441_15415 3001510 .. 3001527 + -12.7   -5.4833   GGAGGACATAAAAAA             CCCGGCA TATA TGCCGGG              TTTTTTATTCAATCC 100 30
        ytzI 3003560 .. 3003574 +  -6.4  -5.58454   TTGGACTTTTAAGGT               CGGCAT GCT ATGCTG               TTTTTTTGCTGTGAC 100 94
        yidD 3004955 .. 3004985 +  -3.3  -3.36694   AACGTTTTCCGGGAA      CAGCGGGTGATGTT TAAT AACGTC-TACGCTG       TCTTTCACACTCGCT  48 109
 JR441_15465 NONE
 JR441_15470 NONE
 JR441_15475 3008613 .. 3008639 +   -11  -4.74706   GATTTATAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG 100 32
 JR441_15530 3021273 .. 3021295 + -14.2   -4.4267   ATCTCCACGCTGATT           GAACCCCCGA TTA TTGGGGGTTC           TTTTCCGTTTTCAGC 100 24
 JR441_15540 NONE
 JR441_15545 NONE
 JR441_15550 3025739 .. 3025762 +  -7.4  -5.52384   AAAACATAAAACCTA          CAGCTCGTGT TGCA AAACGGGCTG           TTTTTTTGCTGCAGA 100 32
        cotI 3029717 .. 3029733 + -10.8  -4.04579   TTAAGACCATCATTT              CCCCCG CATAT CGGGGG              TTTGATCTTTATAAG  89 37
 JR441_15575 3030262 .. 3030278 +  -9.4  -4.63527   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG  91 35
        thiT 3046440 .. 3046464 + -11.4   -4.9755   GCGTAAAAGTAACAA          TCCCCCAGCG AATTC CACTGGGGGA          TTTTTCGTTATCTGT 100 35
 JR441_15745 3049721 .. 3049766 + -16.5  -2.95515   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 5
        gbsR 3053861 .. 3053878 + -12.7  -5.58454   AAGTAAAGCAGAAAA             CGCCTGG GAAA CCAGGCG              TTTTTTTGATGTAAC 100 35
        bslA 3054602 .. 3054619 +  -9.1   -5.2696   GCAACTAATGTAAAA             GACCGGT TAAC GCCGGTC              TTTTTTGCGTTTTAC 100 33
        ktrA NONE
        ktrB 3056984 .. 3057003 + -10.7  -5.71983   GTGATATCAAAAAAA            TCCGGCG TGCAGT CGCCGGA             TTTTTTTATGATTCG 100 37
        cdoA 3061184 .. 3061205 +  -8.8  -4.19953   AATTGACAGAAAAAA           TAAGGCTC GTAAAA GAGCCTTA            TTTTCGACTTACATC  83 280
        iolU 3064477 .. 3064504 +  -9.9   -5.4505   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGGCAA 100 31
 JR441_15870 3080279 .. 3080299 +  -5.3  -5.28942   AAAACAAAGGATGAG            GCGCGTG TCTCTTT CCCGCGC            TTTTTATTTCGCATA  86 398
        mstX NONE
        kbfO 3086724 .. 3086751 +  -9.2  -3.25169   ATGATCGTATTCCCA        GCCGC-CGTTTAT CAC ATAACCGAGCGGC        TTCATCACTTGTTCC  70 331
 JR441_15945 3091706 .. 3091755 +   -14  -4.67552   CTGAAATAGGATTTT GCATGAAACCAAAAGCACCGAACA TTCC TGTCCGGTGCTTTT--TTTCATGC TTATTTTTTGATAAG 100 54
 JR441_15965 3094986 .. 3095000 +  -7.1  -5.41143   TATCAATTAAAAAAA               CCGGT GCTGA ACCGG               TTTTTTTAAGGCGTG  95 31
        patB 3096530 .. 3096557 +  -7.8  -3.71848   AAATATAGCTGTAAA        CGCCTTTACG TCTTCATT TGTAAAGGCG         TTCTTAATAAAGGAA  72 39
        kinB NONE
        kapB 3098361 .. 3098382 +  -6.6  -5.08824   TTTAACCGGCCATAA           CCCAGTCT GACAAA AGATTGGG            TTTTTTACGTCGCGC  86 26
 JR441_15995 3100410 .. 3100420 +  -3.2  -2.66593   TTCCGAGAAAAAACT                 GAGG AAT CTTC                 TAAATTTAACCTTCT  43 41
 JR441_16000 3102343 .. 3102354 +  -3.6  -3.62597   CATCTGGAAAGGAAC                GCTG CAAG CGGC                 TTATTAAAGGATCGG  52 7
 JR441_16005 3102831 .. 3102874 + -21.4  -4.12902   TAGCCATCACAGATT GTTGACAAAATCCTAAAACG GCTT CGTTTTAGGATTTTGTCATC TTTTCAGCGTGATTG 100 61
        maeL NONE
        maeM 3106040 .. 3106064 + -12.9  -4.83269   ATATCTATAAGAAAA          CGCACTGCTTG CTT TGAGCAGTGCG          TTTTTCCTGTCATAT 100 31
        nupN 3107596 .. 3107622 +  -8.1  -4.68779   TGAATAAGAATCGCA         GGGATAAGG AGGTCGAGC CCTTATCCC         TTGTTTTCTTTTATT  88 34
        nupO NONE
        nupP NONE
        nupQ 3111202 .. 3111226 + -12.2  -5.67063   AAGATAAAACATTCT          CCCCTGGGAA GACGA TTCTCAGGGG          TTTTTTTCTAATCCA 100 34
        maeN 3112702 .. 3112724 +  -9.9  -6.08342   CTTCATAAACAGAAA           GAGTTCCGT TTTAT GCGGAACTC           TTTTTTTATTTATTC 100 33
 JR441_16055 NONE
 JR441_16060 NONE
 JR441_16065 NONE
 JR441_16070 NONE
 JR441_16075 NONE
 JR441_16080 NONE
 JR441_16085 3118951 .. 3118976 +  -7.6  -6.08342   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG 100 33
 JR441_16120 3124183 .. 3124206 +  -4.5  -4.40173   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  66 44
 JR441_16125 3125073 .. 3125086 +  -3.9  -4.42386   CAGCATAATGGCCTG               TTGAA TGCT TTCAA                TTTTCTGGCTCAAAC  64 451
 JR441_16165 3130808 .. 3130830 +  -2.7  -4.72272   CGCTTAACTGAAAAA          TAGGACGTCC CGGT GTACG-CCTA           TTTTTCATGCGCAAG  65 23
        adeR 3144790 .. 3144819 + -16.7  -6.17669   TATCAAACTTCGGCA       CATGGATTTGTGA AATT TCACAAATCCATG        TTTTTTTATTTTCTT 100 13
         ald 3146052 .. 3146075 + -11.8  -6.04324   CTTAATTCACAATGA          GCTTGCAGAA AGAT TTCTGCAGGC           TTTTTTATTTTTTAA 100 36
 JR441_16225 3146842 .. 3146862 + -11.2  -4.74801   GTAAGATTAGAAAAA            GAGACTGC GGCGA GCAGTCTC            TTTTTGATACGATTA 100 37
 JR441_16270 3161495 .. 3161516 +   -13   -4.8048   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 67
 JR441_16285 3165140 .. 3165161 + -11.5  -5.00196   TTTCATGTAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACA 100 31
 JR441_16310 3169174 .. 3169199 +  -6.9  -5.63517   AAATAATAAAAAAAG         AGAGCTTGTGTC TGC GACACA-GCTCC         TTTTTTATTTGAAGA 100 35
        guaC 3170615 .. 3170647 + -12.8  -4.51699   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGAGTTGGCG      TTTTCTGCTACTTCT 100 37
 JR441_16355 3176532 .. 3176550 +   -11  -4.60797   AATGATAGAGAAGAA             CCGCTGAT CAA GTCAGCGG             TTTTCTGTATACCCA  95 39
 JR441_16365 3177313 .. 3177339 + -16.7   -5.7946   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTTATTAGAGA 100 33
 JR441_16395 3184587 .. 3184607 + -12.5  -5.08169   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 26
 JR441_16415 3186882 .. 3186898 + -12.3  -4.22338   TAGGAATGACAAAAA              CGCCAGA TGA TCTGGCG              TTTTGGCATTATGCT  93 16
        lytH 3189015 .. 3189056 + -10.3  -6.12458   ATACCAAAAAAAGAA GTAACAAA-AAGCCGCCTCT TCG ACAGGCGGCTTATTTGCTGC TTTTTTCTTTTTTTG 100 22
        pucR NONE
        pucJ NONE
        pucK NONE
        pucL NONE
        uraH 3201581 .. 3201605 + -17.2  -4.67234   GGGGGAGTTAAGAAG          GAAGCCCGCC TCACC GGCGGGCTTC          TTTTTGCACTTCAAT 100 30
        yuzJ 3202180 .. 3202206 + -14.6  -3.93383   CCTCCCTGTCCGACA         GACGCCATAAGA AGT TTTTATGGCGTC         TTTGCTATGTGTTCA 100 74
 JR441_16530 NONE
 JR441_16535 3211572 .. 3211593 + -14.5  -4.91109   TGGCCGTAAGAAAAA           GGTGCTCCT TTTT AGGAGCACC            TTTTTCTAATACACA 100 32
        frlR 3214108 .. 3214135 +  -4.8  -2.63913   AAGATCGTTCTCAAG        CCTGCTGTACAC GCTC GTATGCAGCAGA         TCATGTCCGCTGATA  48 521
        sspG NONE
 JR441_16590 3221078 .. 3221099 + -12.9  -5.06414   AAGAAGAGTAAAAAA           CCGCGGGCC CTGT GGCCAGCGG            TTTTTCTTAAGGACG 100 30
 JR441_16700 3239487 .. 3239507 + -10.4  -3.99805   TGGAACAATCATAAT            GCAGCTGC TTCCC GCGGCTGC            TTTCACTTTTTCAAA  88 27
 JR441_16710 NONE
 JR441_16715 3241119 .. 3241147 +  -5.4  -5.71712   CAATATCAGTAAAAA       GGATACGATGTTC TTTC GGGCATC-TATCC        TTTTTTTGTGTAAAA  88 41
 JR441_16720 NONE
 JR441_16725 3243359 .. 3243382 +   -16   -5.4833   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 33
 JR441_16740 3245538 .. 3245563 +  -7.7  -4.77216   CTGAATCACAAAAAA         GCAGTCTGCTAT AAT GTA-CAGACTGC         TTTTTGGCTATTGTT  88 12
 JR441_16765 3250250 .. 3250274 +  -5.9  -3.55551   AGCTATTCAAATAAC          CCAAATTATAA TTA TTATAATTTAG          TATTGATTTTTATTT  61 27
        mrgA 3250807 .. 3250829 +  -9.9  -5.84011   TAGGGTAACAAAAAA           GCTGAACCT TAATC GGGTTCAGC           TTTTTGTTTTTTCTT 100 33
        cssR NONE
        cssS 3254524 .. 3254548 +  -8.7  -5.71712   ATAGCAGTGCCAAAA          TAGACTGTAGA TGT TTTGCAGTCTA          TTTTTTTATGTGAAA 100 23
 JR441_16795 3255764 .. 3255790 + -19.6  -4.33153   GCAACATATTTAGAA         GAACGGCTGCTT AAA AAGCAGCCGTTC         TTTCTTCCTATTACG 100 28
       gerAA NONE
       gerAB NONE
       gerAC 3261482 .. 3261513 +    -5  -4.28049   GGCTCTCCCTTGCTT      GCGGCGCGGATGGC ATCG GCGATTTCTGCCGC       TTTTGAGGTTTTCAA  65 316
 JR441_16880 3272416 .. 3272436 + -12.6  -5.96219   TGTAGTATAAAAAAA            CGCATCCG TATTT CGGATGCG            TTTTTTTTATACGTC 100 36
 JR441_16910 NONE
        oxdC 3278412 .. 3278443 + -19.6  -3.14564   AAATAAAAGACTTGC      GGCTTGCAGAGAGC ACTC GTTCTCTGCAAGCC       TTCATAAGGAGCTGA 100 35
        rsiO 3278879 .. 3278903 + -10.8   -5.1356   TCCCAGCTAAAAAAA          GAACGCATTC CAATT GGATGCGTTC          TTTTTATTCATAGCG 100 31
 JR441_16955 3286198 .. 3286235 + -15.8  -3.85698   GAAAGCTTGACTAAA   TAAACAAAAGAGCCGC CTGCCC GCGGCTCTTTTGCTTA    TTTATAAGGAACGGC 100 23
 JR441_16970 3289017 .. 3289028 +  -4.4  -4.11692   TTTTATATGCTGTTT                CATG GCCG CATG                 TTTTAAACATGAGTG  61 8
 JR441_16975 3290994 .. 3291011 +  -9.9  -5.22039   TCCGAATGAAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 32
        modA NONE
        modB 3293504 .. 3293520 + -13.7  -5.26875   AAACGCACTAAAAAA              CTCCCCG TAA CGGGGAG              TTTTTTGATTAAAAC 100 30
        yvgO 3295087 .. 3295106 + -10.7  -5.68039   CTTAATATAAAAAAA            GCTGGCG CTCTAA CGCCAGC             TTTTTTTCTGCATTT 100 36
 JR441_17025 3304522 .. 3304558 + -20.5   -4.3014   CCCGGCAGGCTACCA    TAAAAGAAACCTCTCCG TCA TGGAGAGGTTTCTTTTA    TTTTACTGACTATCT 100 96
        iolW 3313134 .. 3313156 +   -12  -4.87291   CACTAAAAAACAAAA           GCCTCCCC AAATAAG GGGGAGGC           TTTTTCATTAGAATG 100 35
 JR441_17125 3323963 .. 3323998 +   -12  -4.77719   TGACACATCATTCAA    TATAGAAAACGCTTGG ATCT CCTTGCGTTTTCTATA     TTTTATTGACTTTTG 100 21
        rghR NONE
 JR441_17140 NONE
        catR 3325663 .. 3325694 +  -5.1  -6.04324   GACTAATTGCTAAAA      CGGTTCTGATCTC AAAGAC GAGAAAAGAGCCG       TTTTTTATTTTTTCC  95 35
 JR441_17150 3327483 .. 3327518 + -17.2  -3.49653   AGTTTACGATTTAAA    TAGAAAAAAGAGGCTGG ACT CCAGCCTCTTTTT-CTA    TTCTATGCAGCTGAT 100 27
 JR441_17175 3331788 .. 3331807 +  -7.8  -5.55769   CGAAGCCGTAAAAAA            CGCCCTGT CATT ACAAGGCG             TTTTTTCTTATGCGG 100 30
        opcR 3336061 .. 3336086 + -13.4  -4.68593   CGAAAACAAAAGAAA         GCAGCTCTCT AAAATA AGAGAGCTGC          TTTTTGCATCATGAG 100 9
 JR441_17210 3337469 .. 3337481 +  -3.5   -3.1552   AGGATTTTGGAGATG                TATTT GAG AAATA                TATTAATAACTAGCA  47 0
 JR441_17215 3338324 .. 3338363 +   -21  -3.06831   GTTATATGCTCTTTT  AAAAACAACCCCATCACC TGCT GGTGATGGGGTTGTTTTA   TTGAATAGACGTTAA 100 24
 JR441_17225 3340771 .. 3340797 + -11.7  -4.53705   GGATCTTTAATAAAA        GAGCTGCCGCAT GATC AT-CGGCAGCTC         TTTTATATAGAAATT  95 31
        araR 3361780 .. 3361808 +    -9  -5.96219   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTTATAGCTG 100 31
 JR441_17330 3364893 .. 3364918 + -19.1  -4.60258   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 32
        rsbQ 3375387 .. 3375398 +  -5.8  -3.05384   GGAACGAAAGGGATA                GAGG TGAC CCTC                 TTAGATGGACAAACA  56 45
        rsbP 3376620 .. 3376657 + -11.5  -5.95539   TGTAAAATAAAATGA   TCCATGAGACATAACAA TGAT TTGTTACATCTCATGGA    TTTTTTTGTTTCAGC 100 31
 JR441_17425 3387500 .. 3387518 + -10.3  -5.05113   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 31
        yvfG 3389130 .. 3389156 + -11.7  -4.62203   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG  95 27
        slrR NONE
        pnbA NONE
 JR441_17525 3407303 .. 3407334 + -16.8  -5.28414   TCAGCAAAAAGAAAA      CCCGGAAAAGAGAA GTAA TTCTCTTTTCTGGG       TTTTTATGTTTATTA 100 8
        sacB 3411609 .. 3411647 + -14.2  -4.31433   TAACAAATAAAAACG   CAAAAGAAAATGCCGATA TCC TATTGGCATTTTCTTTTA   TTTCTTATCAACATA 100 31
        levB 3413231 .. 3413254 +   -16   -5.7946   ATTCATGAATAAAAA          CAGGGGCGGC GCAG GCTGCCCCTG           TTTTTTTATTAGGAG 100 29
        aspP 3414895 .. 3414925 +   -15   -3.9122   ATTGATTACGATAAA       TAAAGAAGCAAGAG GTT TTCTTGCTTCTTTA       TTCTTTACAAACATA 100 23
 JR441_17565 NONE
 JR441_17570 NONE
 JR441_17575 3416507 .. 3416532 + -11.9  -4.46212   ATTGCCCCATCATTT         TGCTGCATGTC ACCA GACCTGCAGCA          TTTTCTGCTGCCGCG 100 219
        cotR 3419777 .. 3419789 +  -3.5  -2.57253   GGGAAGCAAATAAAT                TTTTA TTT TAAAA                CTATTCTCGCTTATC  43 28
 JR441_17615 3424427 .. 3424461 +  -8.6  -4.03085   AAAAGAACTAAGCAA     CCAGTTTGTTACGGTA TTC TATCGGAGCACACTGG     TTTAAATTTTTCTGG  81 62
        clpP 3426651 .. 3426676 + -13.4  -5.72207   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 34
 JR441_17685 3439784 .. 3439800 + -11.5  -5.45726   AGCATGCATAAAAAA              GCGGCCG CGA TGGCCGC              TTTTTTTAACCTGTG 100 30
 JR441_17700 3443379 .. 3443400 + -14.5  -3.93782   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 34
 JR441_17835 3470290 .. 3470300 +  -3.2  -4.98255   AATTATCTTTACTTT                 CAGG CTA TCTG                 TTTTTATGATTAAAG  70 142
 JR441_17840 3471087 .. 3471110 + -12.5   -4.7889   ATTTTAACCAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 34
        nagA NONE
        nagB NONE
        nagR 3477805 .. 3477817 +  -3.4  -2.87501   ACCGTTATACATTTG                TCCA CTATA TGGA                TCGTCTTTCATAAAA  44 0
 JR441_17910 3484816 .. 3484831 +  -6.2  -2.65532   TGAGTAGAAACTTGA              TTGATG GCTG CATCAA               TGCCTTTAAGCTGAT  53 462
 JR441_17935 3493999 .. 3494038 +  -6.4  -3.16564   CGTCCCCCTCTTTCT  TATACAAGCGGGGCGGGT GTAT ACTTGTCCTGCCAGTATA   TTCGTGAGGTGAAAC  61 43
 JR441_17940 NONE
 JR441_17945 3495997 .. 3496036 + -15.7  -4.46212   CTCAGCGTAACGCAA  AACAGCCCGGCATCGCA TCTTCC TGCGGTGCCGGGCTGCC   TTTTATGATCCAGAA 100 31
 JR441_18100 NONE
        tagV 3524203 .. 3524229 + -15.2  -4.56597   CATCCTATTAAAAAA         TGCCCGGTCCTT TTA GAGGATCGGGCA         TTTTTGCGCAGAAAA 100 30
        lytR 3542115 .. 3542141 + -13.8  -5.65927   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 34
        galU 3549446 .. 3549471 +   -12  -5.95539   AAATCTAAACAAAAA         GGCTATTGGA CATTCA TCCAATAGCC          TTTTTTTATTTCAAC 100 33
 JR441_18235 3559272 .. 3559297 +  -3.9  -4.15565   ATGAATCTTTCGCTG         TGCCTGCCG ACAATCCG CGGCAGCCG          TTTTGAGCTGATGAC  58 77
 JR441_18240 3560464 .. 3560490 +  -6.7   -3.0497   AAATGAGAAATCAAG         CTGATCTTTAT ATATA ATAGAGATCGG         TATTGCAAATAATAT  60 22
 JR441_18245 NONE
 JR441_18250 NONE
 JR441_18255 NONE
 JR441_18260 3565351 .. 3565374 +   -14  -5.96219   AAGATAAATCAAAAA          CACCTTTTGC AGCC GCAAAAGGTG           TTTTTTTTATCGATA 100 34
       gerBA NONE
       gerBB NONE
       gerBC 3573063 .. 3573084 +   -13  -5.47159   AGTAAGCAATCAAAA           GGGTGCGC ATGATC GCGCACCC            TTTTTTATGTTCCGA 100 36
        tagT 3575768 .. 3575791 + -18.2  -4.32903   TAGGTGTATAATGAA          CGGGATGGCG ATTA CGCCATCCCG           TTTTACATATTTCCT 100 30
 JR441_18300 3576786 .. 3576804 +  -9.6  -5.62288   TATGCATAAAGAAAA             GACTCCAG AGA TTGGAGTC             TTTTTCTTTTATTGC 100 32
 JR441_18330 NONE
        rbsK NONE
        rbsD NONE
        rbsA NONE
        rbsC NONE
        rbsB NONE
 JR441_18360 3588239 .. 3588274 + -17.8  -3.46205   ACATGACAAAATAAC    TGAGAGGGATTCCGCA TAAA TGCGGAATCCCTTTTA     TTATGAATTGATTTG 100 27
 JR441_18365 3588695 .. 3588726 + -14.5  -4.07568   GGATTTTTAAACAAA      TACAGCCCTGCCG TATGTT CGACAGGGCTGTA       TTTTAAACAAAAGGC 100 31
        alsR 3592950 .. 3592974 +  -2.2  -2.86023   AACTAAAGAGAGTGA          TGCAGGTA CATGAACGA TACTTGCA          ATCTCTTTTTTCTTT  41 13
 JR441_18390 3594521 .. 3594545 +  -7.9  -4.54047   GTATGAAACGAAAAA          CTGCCTTCT GCTTTTA AGAGGGCAG          TTTTGTATACACTAG  84 45
        cotG 3598402 .. 3598430 +    -6  -5.95539   TTTTCATTGTTTCAA       TAGGCTGCCG-GC GGAG GTACGGAAGCCTA        TTTTTTTATTTGCCC  93 47
 JR441_18415 3599265 .. 3599292 + -14.2  -4.39002   AAATATCAAAAAAAA        GAACACCCAGAG TAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 119
 JR441_18420 3599990 .. 3600006 +  -5.8  -3.50393   GCCGTCTGAGTCTGC             GGCTGGC CTTC GCC-GCC              TTGTGTGCCGTACAG  57 331
        chrS NONE
        chrB NONE
        chrA 3603103 .. 3603118 +    -9  -5.79595   CATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTGGCC 100 32
 JR441_18455 3605194 .. 3605209 +    -9  -2.79823   CCGTCAATGAGAATA              TCGGTG TATG CACCGA               CTTCATTTTCAGGCA  66 329
 JR441_18520 NONE
 JR441_18525 3620049 .. 3620069 + -15.5  -5.17576   ATCATGACTAAAAAA            GCTGGCTCT GAT AGAGCCAGC            TTTTTTCCGTTCATA 100 40
 JR441_18550 3623495 .. 3623525 + -15.6  -4.39386   ATATGTTCTGCATGA       AAAAAGCTGCCGTT TTG AACGGCAGCTTTTC       TTTTCGTGCTTTCAC 100 109
 JR441_18560 3625049 .. 3625069 +  -9.7   -5.4505   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 47
        rapD 3627626 .. 3627636 +  -2.4  -3.59979   CGTTCTCATCAAGTA                 CGGG ATA CCCA                 TTTCCAGTGACGAGC  49 428
 JR441_18605 NONE
 JR441_18610 3632494 .. 3632517 + -18.2   -5.1287   CAGAATAACTTGTCA          GACTGCCGGG AAAT CCCGGCAGTC           TTTTTTGCATATAAA 100 33
        amtB NONE
 JR441_18645 3640174 .. 3640196 + -12.8  -5.60993   CTTTAATATCGGTAC           GAGATTCGGA CAC TCCGGATCTC           TTTTTTTGTGCACAG 100 35
        bcrC 3640939 .. 3640966 +  -9.2  -4.14652   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTTTCAT  85 37
 JR441_18665 NONE
 JR441_18670 3643537 .. 3643567 +  -9.1  -4.07285   GATGAGACAGGACAG      GGCATGAGTTCCAT ATAA ACGGAAC-CATGCC       TATTTTATTTGACTA  81 42
 JR441_18675 3643940 .. 3643964 +  -2.2  -5.25805   TCGCTCTTTTTGATC         CTGTTCAGCAT ATAG ATG-TGAACCG          TTTTTTGGATTTGTT  74 155
         cls 3645943 .. 3645965 + -17.7  -4.32034   TATAAGATGCGAAAA           CCCCCGGCC TTTAC GGCCGGGGG           TTTTCCTGATGGTCA 100 36
 JR441_18695 3647264 .. 3647281 + -12.7  -5.64873   TATTAATGAGAAAAA             CCCGGAG CTGG CTCCGGG              TTTTTTATTATTCCG 100 35
 JR441_18800 3662870 .. 3662890 +  -9.8  -5.72254   TCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 31
 JR441_18895 3677673 .. 3677691 + -13.2   -5.4505   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 16
 JR441_18915 NONE
        racA 3681181 .. 3681198 +  -8.4   -5.7946   AACCTAAAGCAAAAA             GCTCCC CGTAAA GGGAGC              TTTTTTTGTTACGCA 100 34
 JR441_18980 3692486 .. 3692515 +  -5.8  -5.57396   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAAC-GGCAAGTC       TTTTTTATTACTTCT  91 70
         cls NONE
        uvsE NONE
 JR441_19015 3701027 .. 3701046 + -10.8   -5.2291   CTTACATACAAAAAA            GGATAGAC ATCT GTCTATCC             TTTTTCTTATGCTCT 100 41
 JR441_19060 3713348 .. 3713367 + -10.8  -5.47821   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 31
 JR441_19085 NONE
        sboX NONE
        albA NONE
        albB NONE
 JR441_19105 NONE
        albD NONE
        albE NONE
 JR441_19120 NONE
        albG 3724902 .. 3724915 +  -3.1  -2.83905   CGCGCCAACCGGAAT               CA-CCG TCA CGGCTG               TATAATCACTTGTGC  44 70
        rapF NONE
        phrF 3729113 .. 3729129 + -10.8  -5.94713   CGAGGAATGATTTAA              CCGCCG TCCAT CGGCGG              TTTTTTTTGTCCCCT 100 26
 JR441_19165 3733751 .. 3733777 +   -13  -3.33762   CGACATCATTGAAAA         TAACCCGGCTCC TCG GAGGCCGGGTTA         TTCGTATGGTTCCTT  93 29
 JR441_19180 3735539 .. 3735559 +  -9.6  -4.79955   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT 100 36
        rsfA 3744071 .. 3744096 + -12.7  -4.13014   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTACA  95 36
 JR441_19245 3749213 .. 3749234 +   -13  -4.68994   TATGTATAATATCCC           CTCCCGCC CTATCC GGCGGGAG            TTTTTCAATCCTCCT 100 32
        bacG 3750122 .. 3750143 + -14.5  -4.35483   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 29
        gerQ 3775840 .. 3775867 + -12.2  -5.32944   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGATTATAGA 100 33
 JR441_19390 3779511 .. 3779527 + -12.3  -4.60889   TACTCAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTACAAATCCTT 100 30
 JR441_19405 3782042 .. 3782066 + -13.6  -4.65895   AATCATAAACAAAAG          GGGCTGCCTT ACAGA GAGGCAGCCC          TTTTTAAATCACCGA 100 33
 JR441_19425 3786828 .. 3786846 +  -8.8  -3.00046   CTCTTTTACATGTCC             GATCGCCC ACA GGCCGATC             TCATATTCTTTTTTA  66 493
         vpr 3790528 .. 3790548 +   -14  -4.60041   GTTGAATAAGAAAAA            GCCCTGCC CAATC GGCAGGGC            TTTTTAAAGATCAGT 100 32
        ywcE 3794544 .. 3794563 + -12.2   -5.2015   GAAGACAGCAAAAAA            CCCTCTTC CAAT GAAGAGGG             TTTTTGTATTATTCG 100 39
 JR441_19485 3799288 .. 3799313 + -15.5  -4.67048   GGATAAAAGCAGCAG         CACCCGAAGCG TCAG CGCTTTGGGTG          TTTGTTTTGCCATAA 100 35
        slrA 3803871 .. 3803885 +  -8.6  -3.03243   CTACGACAGACAGCC               GGTGAT GCG ATCACC               TCTTGGCACATGCAT  70 162
 JR441_19515 3804477 .. 3804494 +  -4.1  -4.02946   GATCTGAAGGGTGAA             CAGACAT GAAT ATGACTG              CTTTTTTATTATTTT  58 17
 JR441_19520 3806029 .. 3806046 +  -9.9  -5.00412   ACAGGAATAAAAAAA             GCTCTCT TTAT AGAGAGC              TTTTTCCTTGTCTTT 100 31
 JR441_19560 NONE
 JR441_19565 3814517 .. 3814534 +  -7.7  -5.75478   CATTTATGTAAAAAA             CTGTCCT CTCG AGGGCAG              TTTTTTTATGTGCTT 100 30
 JR441_19570 NONE
 JR441_19575 3816056 .. 3816076 +  -9.7  -5.10004   TCTACATAAAAAAAA            GCTGCCC CTGAACA GGGCAGC            TTTTTCATTATTTTT 100 32
        glxA 3817780 .. 3817805 + -11.3  -5.76633   AGCGATAAAAAAAAA         GAACGTACATT TTGT GATGTACGTTC          TTTTTTTATCTATAC 100 33
         epr 3822069 .. 3822099 + -13.5   -5.1925   AAAAGTAACCAAAAA       CCTTTAAGACTTG CATTC CAGGTCTTAAAGG       TTTTTTACATTCTAA 100 33
        sacX NONE
 JR441_19610 3824783 .. 3824805 + -10.7  -5.77988   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATATCTGT 100 39
        ywaE 3827365 .. 3827392 +  -9.9  -5.59879   GGTACCGCGTGCATT        GAGCCACGTCCC TTATC GGGATG-GGCTC        TTTTTTGTGTTTGTA 100 219
 JR441_19630 3828679 .. 3828704 +  -7.7  -5.42862   TTTGATATTCCGAAA         CGCTTATGA CCCTTCAT TCATAAGCG          TTTTTTTGCAGGTAT 100 41
        ywaD 3830192 .. 3830211 +  -9.3  -5.16237   TATCAAATAAAAAAA            GACGGCA CTTGGT TGCCGTC             TTTTTTAATCCACTT 100 31
 JR441_19655 NONE
        dltA NONE
        dltB NONE
        dltC NONE
        dltD NONE
 JR441_19680 3837502 .. 3837524 + -12.1  -5.22312   CGAGCAAATGAACAC           GCAGGAGAA TTAAT TTCTCCTGC           TTTTTTCATATGAAT 100 13
 JR441_19685 3838753 .. 3838773 + -11.1  -5.47399   AGCAAGTAAGAAAAA            GCCGGCC CAGTACA GGCCGGC            TTTTTTTACGCTTCA 100 32
 JR441_19725 3846914 .. 3846935 + -10.9  -6.23317   ATTAACAACAGCGAA           CAGGGCTTT TTTT GAAGCCCTG            TTTTTTTATTTTTCT 100 36
 JR441_19730 NONE
 JR441_19765 3852681 .. 3852703 + -12.1  -5.37345   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 10
        cimH 3861377 .. 3861406 + -10.9   -5.1287   TATTGATCCCCGCAA       GCAAGTTC-TTCGT CAA ACGAAAGAGCTTGC       TTTTTTGCATGTCCA 100 35
 JR441_19800 NONE
 JR441_19805 3863421 .. 3863440 + -12.1  -6.01187   TGTGGCGGCGGAGGG            GGCGGCG ATTAAA CGCCGCC             TTTTTTTATTTCATT 100 14
 JR441_19825 3868154 .. 3868178 +  -7.2   -5.5454   TTCTAAATGAAAAAA          TCCCTCTG CTTCAAGTA CAGAGGGA          TTTTTCTTTATTTAG 100 35
 JR441_19835 3870143 .. 3870168 + -17.7  -3.91488   TCAAATAACAGCTAA         CAAGGGTGCCT GTTC AGGCACCCTTG          TTCTTTAAAGGCCTT 100 33
 JR441_19845 NONE
        yxjM NONE
        yxjL NONE
        pepT 3875100 .. 3875121 +  -5.8  -5.36441   GCCTAATGCCAAAAA           ACCAGTCC AAAAAA GGACTGGC            TTTTTTGTGTGAAAG  89 35
 JR441_19865 3875898 .. 3875917 +  -8.6  -4.26634   TATTTCAAACGAAAA            GGCTGC-TG AAT CACGCAGCC            TTTTAAAATTGTTTT  83 46
 JR441_19870 3876685 .. 3876708 +   -14  -4.68593   GATTTGATCGTTCAA          GCTCTTCCTT CACA AAGGAAGAGC           TTTTTACATGCTCAA 100 216
 JR441_19875 3878073 .. 3878097 +   -13  -5.56264   GAGATTGTCACGCAA          GCTCTTCCTT ATCCA AAGGAAGAGC          TTTTTTATATTTGAA 100 217
 JR441_19880 3879283 .. 3879312 +    -8  -5.42131   TAAGAAAAGAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG  95 38
 JR441_19910 3885735 .. 3885762 + -14.3   -4.5774   TGTGGTAGAAACATT        GAGCCATATCC CTTTTC GGATATGGCTC         TTTTCATTATTGATA 100 33
        citH 3890585 .. 3890609 + -11.5  -3.71917   TCATTACAATCATAA          GAGCCTGCT ATATTGC AGCAGGCTC          TTTCACATTTGGCAT  91 144
 JR441_19950 3894735 .. 3894764 + -10.1  -3.37654   CAGCCAGCAGCAAAA       TGACCTGC-CCC TTTAACT GGGAGCAGGTCA       TTCATCATTTATTCG  78 10
 JR441_19965 NONE
 JR441_19970 3898461 .. 3898498 + -12.2  -4.78764   TTTGGCGCGTCATAT   GCAGAAACCCCAACCTT GAGTG AAGGCTGGGGTTT-TGC   TTTTTAATAACTTTC 100 138
        hutP 3916832 .. 3916870 + -11.9  -4.96848   GATCTTAGACGATAG  GGGGCTATGC-GTGAAAA CAGA TGTTCACAGCATAGCTCC   TTTTTGTATGGGCGC 100 52
        hutH NONE
        hutU NONE
        hutI NONE
 JR441_20050 NONE
 JR441_20055 3923841 .. 3923867 +    -8   -5.8187   CCTTTAATCAAAAAA         GCACACCCCA CTCAGGA TGGGATGTGC         TTTTTTTATTCAGTA 100 34
       cotNE 3940856 .. 3940895 +  -4.2  -3.26668   AAACAAAGAAAAAAA  GCGGAATACGATTCTC CCATCTCA GGGTTTCGTTTTCCGC   ATTTCTTATATGTTA  51 44
 JR441_20155 3941450 .. 3941474 + -10.1  -5.85737   AGTAACATATAAAAA          GCTCAACAC AATGCGC GTGTTGAGC          TTTTTTTCTTACTGT 100 36
 JR441_20165 3943030 .. 3943053 + -10.3  -5.37345   TAAAAAATAAAAAAA          CGGCACAGT CATGAC GCTGTGCCG           TTTTTTATGATTCAC 100 31
        iolR NONE
 JR441_20250 3961425 .. 3961449 + -18.7    -5.626   CGCATAAGAAGAAAG          CAGCCTTCTCC ATT GGAGAAGGCTG          TTTTTTTGTGCGATA 100 34
 JR441_20255 NONE
 JR441_20260 3962658 .. 3962678 +  -7.6   -5.5943   ATGTCTTAATCAAAA            CCTTACTC CGCGC GGGTAAGG            TTTTTTTAATGGTTT 100 49
 JR441_20265 3964269 .. 3964295 + -13.1  -5.19879   TACATTATAAAAAAA         GGAATCGTCTC CTTAT GGGACGATTCC         TTTTTCTGTTTACAC 100 31
 JR441_20280 3967540 .. 3967564 + -13.7  -3.81488   AAGAAAGAAACGAAA          TAAGAGAGGGG ATG TCCCTCTCTTA          TTGTCTTTCAAAGCA 100 23
 JR441_20290 3970206 .. 3970229 +  -7.5  -5.90231   TAATCGTAATGAAGA          GAATCTGCA TCATCT TGCAGGTTC           TTTTTTTATCTTTAT 100 38
 JR441_20295 3970856 .. 3970884 + -14.6  -4.49756   GATTGATCAAAAAAA        CAGGCTGCCGAG TTAAC CTCGCCAGCCTG        TTTTACTATTTCCCA 100 35
 JR441_20310 3973365 .. 3973400 +   -12  -4.88918   TGTATAAATAATAGA    AAAAAGTCTAGACGCC AATA GGCATCTAGACTTTTG     TTTTCTTTACAATAG 100 30
 JR441_20330 3977609 .. 3977634 +  -3.4  -4.66953   ACCATGATAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  64 47
 JR441_20340 NONE
 JR441_20345 3979379 .. 3979401 + -10.6  -4.98531   TATTTAACAAAGAAA           GACTGCCC CGGGGGA GGGCAGTC           TTTTTCGTTTAAGAA 100 34
        gntR NONE
        gntK 3984163 .. 3984176 +  -6.7  -2.54687   TGACATGAAGGGGAG               GGCAT TACC ATGCC                GTTAATCATCGTTGC  57 45
        gntP NONE
         gnd 3986962 .. 3986986 +  -9.4  -5.60864   ACCTGTCATCAAAAA         CACGG-TCAGT TTCA ACTGAACCGTG          TTTTTTTCATCTATG 100 40
        ahpC NONE
        ahpF 3989536 .. 3989574 + -14.9   -5.4505   CCGTAACTGATATAA  GAAAGCCGCAAT--TGCCA GAT TGGCAGCATTGCGGCTTTC  TTTTTTATTCCAAAA 100 31
 JR441_20405 3994292 .. 3994312 + -12.7  -2.76539   AGGTGCACATAAAAA            GCTACTTCA TTG TGAAGTAGC            TCCCTTTATTAAATG  86 312
         fbp 4000602 .. 4000614 +  -5.5  -4.69027   TTACTCTGACTGATT                GTCGT TTG GCGAC                TTTTTAGGTGGGTTT  73 483
 JR441_20470 4005010 .. 4005033 + -13.2  -5.54338   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 27
        rapG NONE
 JR441_20510 4010726 .. 4010743 + -14.1  -3.27525   TGGATAAATGAAAAA             CCCCCGC GGGT GCGGGGG              TTCAATTTAACGAAA 100 34
        rocR 4016611 .. 4016635 + -14.3  -5.50499   ATATATCCTTTTCAA          CTGAACGGGCG TGA CCCCCGTTCAG          TTTTTTTGCATATCA 100 263
 JR441_20610 4028334 .. 4028351 +  -9.1  -5.06103   TTTAATGAATGAAAG             CCTTCGC TGCA GCGAGGG              TTTTTTAGCGGTTAT 100 36
 JR441_20620 NONE
 JR441_20625 4030119 .. 4030137 +  -8.1  -5.65927   AAATTCAGCATAAAA             GCGGGGA AAATA TCTCCGC             TTTTTTCTTTGAATA 100 28
 JR441_20630 4032280 .. 4032313 + -15.5   -3.1315   TATCTCGTGGAATAA     AAAAAGAGGCTTGGA TGAA TCCAAGCCTCTTTTC      TATTAAGCTTCTTCT 100 26
        cotF 4036715 .. 4036741 + -12.4  -3.58864   AATGAAATAAAACAA         GCAGCAAAGG AGTTTTC CCTTTGCTGC         TATTTCTGCTGATCC  90 31
 JR441_20665 4038241 .. 4038298 + -18.1  -3.50047   TGTCTTAACAGACGC AATGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCAGC TTCTCAATTTGTCCC 100 13
 JR441_20680 4040477 .. 4040498 +  -8.8  -4.90778   TTAAACTGGAATGAA           GAGTGCTT GCTGAA AAGCACTC            TTTTCTTTGAATCCG 100 27
 JR441_20685 4041589 .. 4041619 +  -7.8  -2.60032   CAACCGGATACAAGC      CCGATA-AAGGAT TCACCC ATCCTTCTATCGG       CATTTTTAACACACC  59 242
 JR441_20700 4043645 .. 4043661 +  -5.1  -5.06451   ATTGGAAATAAAAAA              GGACC CGCTTAT GGTCC              TTTTTTGCCGTCATC  76 30
 JR441_20710 NONE
 JR441_20715 4046442 .. 4046452 +    -4  -3.30443   TGTCACTTATGAGCA                 TGAA CGG TTCA                 TTGGTATACTAATCA  50 55
 JR441_20720 4047052 .. 4047067 +  -4.6  -5.93252   CCGCAAAAGCCTCTG              CGGCAG GCAG CTGCCA               TTTTTTCTTTTTGGG  91 103
 JR441_20735 NONE
 JR441_20740 4049565 .. 4049586 +  -9.5  -3.53012   TCTTATCAAAAAAAA           GAAGGGGTT AAAA AACCTCTTC            TTTGAAAAAACGAAA  78 15
 JR441_20750 NONE
 JR441_20755 4051669 .. 4051689 +  -9.7   -3.2819   CTTATTGAACTAAAG            GGGGAATCC AAT GGGTTCTCC            TTAATACTATTGAAT  77 97
 JR441_20775 4054135 .. 4054163 +  -2.4  -6.01187   ATTCATTTTCTAAAA       CCTGTAATC-CGT AACC ACGCGGTAGCAGG        TTTTTTTATTTGCTT  87 79
 JR441_20780 NONE
 JR441_20785 4055578 .. 4055588 +  -2.6  -3.13788   AGAAATAGGGAGTAT                 TTTT GAG AAAA                 TGTGTTAAGTTAAAT  45 41
 JR441_20790 4057686 .. 4057719 +  -8.9  -5.10877   GCGATCCACACATTA     ATAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTAC      TTTTTGATTTCTTAT 100 8
 JR441_20800 4060186 .. 4060208 + -13.5  -2.92246   ACAGATTTAAAAAAG           TCAGTGCGG ATCTG CCGCACTGA           TCTCATTACAATTGC  90 31
        yyaC 4069944 .. 4069964 +  -5.5  -5.42514   CATATAAAATAAAAA            CCATCTT CGTTTGA AAGATGG            TTTTTTCATTTATGA  86 34
 JR441_20875 4072290 .. 4072312 + -13.5  -4.01088   TTAAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 51
        rpmH 4079650 .. 4079673 -  -8.9  -5.11033   CATAACGTGAAAAAA          GACCACTGA CATTAT TCAGTGGCC           TAAGCTGATAATACT 100 25
        rnpA 4079067 .. 4079078 -    -3  -2.75844   TCTTTTATTGCAAAG                CATA CTTG TATG                 TATTTTAGCATCTTT  42 118
     spoIIIJ NONE
 JR441_20900 4077583 .. 4077610 - -11.4  -5.71712   TCGGATACAAAAAAA        CCGAAATCCAAT TTTT ATCGGACTTCGG         TTTTATGCTATCTTT 100 33
        mnmE NONE
        mnmG NONE
        rsmG NONE
         noc 4072290 .. 4072312 - -13.5  -5.36364   TTAAAAATATAAAAA           GCTCTCCTG CTTTT CAGGAGAGC           TTCTATTTTGGTATG 100 28
         soj NONE
       spo0J 4069944 .. 4069964 -  -6.2  -5.58522   CATATAAAATAAAAA            CCATCTTC GTTTG AAAGATGG            TTTTTTCATTTATGA  91 35
 JR441_20855 NONE
 JR441_20850 NONE
 JR441_20845 4065462 .. 4065494 -  -4.9  -4.13945   AGGTTCACTGGAAAA      GACAAGCTGACAA AAAAGCA TTTTCAGCCTGCC      AATCCCTTTGATTAT  63 37
        ychF 4064219 .. 4064229 -  -2.6  -3.27476   ATGGGCAAGGAGCAA                 TAAT TCT ATTA                 CTCACAATTTTATAT  45 75
 JR441_20835 NONE
         ssb 4063329 .. 4063343 -  -4.2  -2.69433   TAATCACATTAGAAT               GGAAGA TCA TCATCC               GAGATGTCAATCGGT  47 4
        rpsR 4063000 .. 4063025 - -16.3  -5.24129   CCCCCCTATAAAAAA         GAGCAAGAACC CGAA GGTTCTTGCTC          TTTACGCATCAGCTT 100 39
         xth 4062184 .. 4062208 -  -5.8  -5.71712   TTTCATATAAAAAAA          GCAGTAAG TGTAAAATC CTTACTGC          TATCTCATCATATAT  91 33
        ccpB 4061206 .. 4061219 -  -3.9  -2.61602   TGAAGTTATAAGGTA               TGAAA TGCA TTTCA                GTTCAAGCTTTTTTC  45 28
 JR441_20810 NONE
 JR441_20805 4060185 .. 4060209 -   -10  -5.15381   AACAGATTTAAAAAA          GTCAGTGCGG ATCTG CCGCACTGAT          CTCATTACAATTGCT 100 30
 JR441_20795 4057687 .. 4057718 - -12.4  -3.32993   CGATCCACACATTAA      TAAGCAGCAGGGAT TAAG ACCCTTGCTGCTTA       CTTTTTGATTTCTTA  89 7
 JR441_20770 NONE
      tet(L) 4052072 .. 4052106 -  -6.6  -5.26316   TCATTTTACAAAAAA     GGATCAACCTTG AATTACTTTCA CAAGATTGATCC     TTTCACTCATTTAGC  91 36
        satA 4049565 .. 4049586 -  -7.3  -5.86061   TCTTATCAAAAAAAA           GAAGGGGTT AAAA AACCTCTTC            TTTGAAAAAACGAAA 100 82
 JR441_20730 4047820 .. 4047832 -  -4.1  -2.94888   AATTCACGCAAACCA                TCTCC TGT GGAAA                TTTTTTGATAGTTTT  47 151
 JR441_20725 4046983 .. 4047005 -  -9.9  -4.81359   AATTTAAATAGAAAA           GGAGTGAGC CTGAC ACTCACTCC           TTTTGCTCATGAATC 100 169
 JR441_20705 4043645 .. 4043661 -  -5.1  -5.64421   ATTGGAAATAAAAAA              GGACC CGCTTAT GGTCC              TTTTTTGCCGTCATC  88 39
 JR441_20695 NONE
 JR441_20690 4041364 .. 4041374 -  -3.2  -3.28712   GTTGTCGTTGCAGAA                 CACC TGT AGTG                 TTTTGTCACCCTTTA  47 61
 JR441_20675 NONE
 JR441_20670 4038243 .. 4038296 - -25.1  -3.19175   TCTTAACAGACGCAA TGGCTGAATAAGCAAAAAGCATCCCG CGT CGGGATGCTTTTT-CTTATTCACCCA GCTTCTCAATTTGTC 100 15
        hypR 4036715 .. 4036741 - -13.1  -4.57791   AATGAAATAAAACAA         GCAGCAAAGGA GTTTT CCCTTTGCTGC         TATTTCTGCTGATCC 100 25
 JR441_20650 4035902 .. 4035923 -  -8.1  -4.80167   CATGAAAAATGAAAA           GACATTCTT TGAA AAGAATGCC            CATCACAATTAATGT  95 34
 JR441_20645 NONE
        gdpP NONE
        rplI 4032285 .. 4032308 - -15.4   -5.7946   CGTGGAATAAAAAAA          GAGGCTTGGA TGAA TCCAAGCCTC           TTTTCTATTAAGCTT 100 33
 JR441_20615 4028135 .. 4028150 -  -3.2  -4.61852   AAGATGATAAAGAAA              TATGCG ATTA CGCCTA               ATGTTGATGCGGACG  66 246
        dnaB 4026567 .. 4026587 - -15.5  -5.26875   TTTCGAATGAAAAAA            CCCCAAGAG CAG CTCTTGGGG            CTTATGCGCCGGGCG 100 27
 JR441_20600 NONE
        purA 4024515 .. 4024537 - -13.5  -5.63517   CTTTCAAACAAAAAA           CAAGCCCCT TAAAT AGGGGCTTG           CAGACATATTCTATT 100 40
 JR441_20590 NONE
 JR441_20585 4024099 .. 4024135 - -10.3  -3.27022   CGGACCTTACAGTAA   TTGCCCG-GAGAGCTG TCGTGT CAGCTCTCACAGACAA    ATAAGGAATTTAGCA  79 58
 JR441_20580 NONE
 JR441_20575 4023874 .. 4023895 -  -8.7  -5.79595   TCCTAAAAGAAAAAA           CGCACCTAC GATT GCAGATGCG            TTTGGTAAGTGGCTC 100 33
        walR NONE
        walK NONE
        walH NONE
        walI NONE
 JR441_20550 4017974 .. 4017988 -  -3.4  -3.23684   CATAGAAAAATTATA               CAGCGC AAA GCGGCG               TGGCCTTCTTCGGAT  47 6
        htrC 4016654 .. 4016678 - -12.2  -4.34402   TTTTGCATATCAAAA          CAGCCTGGCA AACGA TGCCAGACTG          TTTTGATTAACTTCC  93 32
        rocD 4013525 .. 4013540 -  -3.9    -2.508   AAACGAAGTGAATAT              CCCGC CATGGT GCGGA               TTTATGCGTTTTGCA  45 27
 JR441_20520 NONE
        rocF 4010927 .. 4010944 - -14.1  -3.59262   GTCGACACGCTGAAA             CCCCCGC GGGT GCGGGGG              TTTTCTTATTATAGC 100 34
 JR441_20500 4008900 .. 4008914 -  -7.1  -4.96848   TCGTTTACAGAAAAA               GGCCT TTATC AGGCC               CTTTTCGTTAAAGCT  85 33
 JR441_20495 NONE
 JR441_20490 NONE
 JR441_20485 4006572 .. 4006590 -  -4.6   -5.7946   GGTTCAACAAAAAAA             GAGACT TCACACC AGTCTC             TTCATAATTAGAGAT  91 40
 JR441_20480 NONE
        fdhA 4005010 .. 4005033 - -13.2  -4.27441   ATTACCAGCAATAAA          GCCGG-CGTTC TGA GAACGTCCGGC          TTTTTCTTTTACTTC 100 34
 JR441_20465 NONE
        rlmH 4003683 .. 4003693 -    -4   -2.7361   TTAAGTATAAAGTTA                 CTTA TGA TAAG                 GCTCCCCACGATTAA  45 12
 JR441_20455 NONE
 JR441_20450 NONE
 JR441_20445 4000268 .. 4000283 -  -7.6  -3.89938   AGAAGCAAATCTAAA              CACCTT TCAG AAGGTG               ATGATTTAAAACTCA  74 434
 JR441_20435 3997567 .. 3997583 - -10.9  -3.76534   CCAACAAATGGTAAA              GGAGAGT TAG ACTCTCC              TTTGTACCCCTCTAA  88 41
 JR441_20430 NONE
        liaK NONE
 JR441_20420 NONE
 JR441_20415 3994292 .. 3994312 - -12.7   -4.9725   AGGTGCACATAAAAA            GCTACTTCA TTG TGAAGTAGC            TCCCTTTATTAAATG 100 34
        bglA 3991234 .. 3991271 -  -9.9  -4.82667   GGATCATATCAAAAA   CCCGAACCAGGCACT ACGGTAAA AGTGCTCGATTCGGG    CCAGCTTCTTATAGT 100 34
 JR441_20390 3989536 .. 3989574 - -14.9    -3.551   CCGTAACTGATATAA  GAAAGCCGCAAT--TGCCA GAT TGGCAGCATTGCGGCTTTC  TTTTTTATTCCAAAA 100 91
 JR441_20355 NONE
 JR441_20350 3979379 .. 3979401 - -11.3  -4.69214   TATTTAACAAAGAAA           GACTGCCCC GGGGG AGGGCAGTC           TTTTTCGTTTAAGAA  95 34
 JR441_20335 3977609 .. 3977634 -  -3.4  -5.01497   ACCATGATAGAAAAA        CCCATGCTGTTC CAGC GAAC--CATGGG         TTTTTCAGCTGTTAA  70 37
        yxaF 3975798 .. 3975816 -    -6  -3.97834   TAATTGTAGGAGAAA             GGATAACA AAA TGCTACCC             TTTTTTTCTCACCAG  65 20
        qdoI NONE
 JR441_20315 3973370 .. 3973395 - -14.1  -5.57729   AAATAATAGAAAAAA         GTCTAGACGCC AATA GGCATCTAGAC          TTTTGTTTTCTTTAC 100 20
 JR441_20305 NONE
 JR441_20300 3970856 .. 3970884 - -14.6  -5.53991   GATTGATCAAAAAAA        CAGGCTGCCGAG TTAAC CTCGCCAGCCTG        TTTTACTATTTCCCA 100 31
 JR441_20285 3967540 .. 3967564 -   -13  -4.30977   AAGAAAGAAACGAAA          TAAGAGAGGG GATGT CCCTCTCTTA          TTGTCTTTCAAAGCA  95 33
 JR441_20275 3966342 .. 3966362 -  -5.4    -5.252   CATTCTCATAAAAAA            GAGAGGCT TCATC ATCCTCTC            TTTTTTTCTGTGTCA  86 16
        htpG 3964269 .. 3964295 - -11.7  -5.69473   TACATTATAAAAAAA        GGAATCGTCTCC TTAT GG-GACGATTCC         TTTTTCTGTTTACAC 100 35
 JR441_20240 3957754 .. 3957784 -  -7.6  -2.83271   CTATTGGCAGAATGA      GTCCGAACAGCGC ACATGG ACGCCGTTCGG-C       TGTTCGTCGTTTAGT  64 36
        iolB NONE
        iolC NONE
        iolD 3953964 .. 3953974 -  -6.8  -3.01712   GCCTCCCCTCTAATA                 CTGC TTC GCAG                 ATTCCAGCTTTTTCT  60 9
        iolE NONE
        iolF NONE
        iolG NONE
 JR441_20205 3949721 .. 3949762 - -16.8  -2.58999   GTTTTAGATATGAAG GGAGTTCGGCAGGA-A-GGC TGTC GCCATATCCCGCCGAACTCC ATGCTCAGCTTATGC 100 35
        iolI NONE
        iolJ 3947930 .. 3947944 -  -9.2    -5.626   CACCGCACAAAAAAA               CCGCCA TCT CGGCGG               TTTCTGGTCTCTTTA 100 38
        yxdJ NONE
        yxdK 3946118 .. 3946150 -  -5.7   -5.0916   CGTTCAACATAAAAA      TCCCCTTGACA TAAATCCATGT TATCAAGGGGA      AACAAAGCGGGCTAT  81 61
        yxdL NONE
        yxdM NONE
 JR441_20170 3943030 .. 3943053 -  -9.6  -6.28401   TAAAAAATAAAAAAA          CGGCACAGTCA TGA CG-CTGTGCCG          TTTTTTATGATTCAC 100 37
 JR441_20160 3941450 .. 3941474 - -10.8  -5.10968   AGTAACATATAAAAA          GCTCAACACA ATGCG CGTGTTGAGC          TTTTTTTCTTACTGT 100 34
 JR441_20145 NONE
 JR441_20140 NONE
        yidA 3938530 .. 3938551 - -10.2  -5.52347   AATAAAACGAAAAAA           TCCAGCCT TCTAAG AGGCTGGA            TTTTTTATTATTTAG 100 33
        yxeI 3937370 .. 3937404 - -11.5    -5.626   GATTGTATAAAAAAA     CAGCTGACTCCAGAT ATTCA AACCGGAATCAGCTG     ATTGATGTGAATTAA 100 37
 JR441_20120 NONE
        snaB NONE
 JR441_20110 NONE
 JR441_20105 NONE
 JR441_20100 NONE
        sndB NONE
 JR441_20090 NONE
        eutH 3929200 .. 3929222 -  -4.8  -3.89346   TCCCGATTGGACAAA           GTTGAAACAG CTT CTGCCTCAGC           TATGGCCGGCTGAGA  61 21
 JR441_20080 3928291 .. 3928318 -  -8.4  -4.86939   TAAGAAACTGAAAAA        CGCTCTGGGC GCGGACCT GCCCAGAGCT         TACTTCTCCCAGGTC  95 25
        deoR 3927257 .. 3927268 -  -4.4  -3.35467   GTCACAAATCATTAA                CAAG CGCC CTTG                 CGGTATGCTGGTCAA  53 0
        deoC 3926438 .. 3926458 - -11.9  -4.36914   TGTTTCCTCAGAAAA            CGGAAAGCA GTC TGCCTTCCG            TCAGCTCTTAATAGT 100 33
        nupC NONE
 JR441_20060 3923841 .. 3923867 - -10.9  -5.26875   CCTTTAATCAAAAAA         GCACACCCCAC TCAGG ATGGGATGTGC         TTTTTTTATTCAGTA 100 31
        abnB 3914392 .. 3914409 - -11.3  -5.68039   AAACTCATAAAAAAA             CGCCTTC CTAC GAAGGCG              CTTCTCCATCTTATT 100 36
 JR441_20020 NONE
 JR441_20015 NONE
 JR441_20010 NONE
 JR441_20005 3911441 .. 3911468 -  -7.7  -5.50313   TATAAAAGTAAAAAA        CCTTGAAAGGC AATTTA GCCCATCAAGG         TATATGTTTTATTTT 100 34
        bglP NONE
        bglH NONE
 JR441_19990 3907224 .. 3907237 -  -9.5  -6.23545   TCTAAATAAAAAAAA               GCGCC CAAG GGCGC                TTTTTTTACAAATCT 100 39
 JR441_19985 3906136 .. 3906148 -  -6.2  -6.09196   CCTAAAACAAAAAAA                GGCC GCATA GGCC                TTTTTACATTTTCCA 100 41
        wapA 3898980 .. 3898994 -  -2.9  -3.90744   TCCCTCCCCAAATAA               TTTGT GTCTT ACAAA               ACACTATCTTCTTTT  52 29
 JR441_19975 3898468 .. 3898492 - -12.2  -3.95073   CGTCATATGCAGAAA          CCCCAACCTT GAGTG AAGGCTGGGG          TTTTGCTTTTTAATA  93 130
 JR441_19960 3896296 .. 3896312 -  -2.1  -4.28548   AGTGATGTATTAAAA              GCCATCG ATT CCCTGGC              GTTTTAGCTCCTGAA  56 3
        dbpA 3894735 .. 3894764 - -11.5   -4.3129   CAGCCAGCAGCAAAA       TGACCTGCCCC TTTAACTG GGAGCAGGTCA        TTCATCATTTATTCG  91 30
 JR441_19945 NONE
        licT 3891503 .. 3891555 -    -8  -5.86609   TGAAAAAAATAAAAA CCTAAATTACCATCAGCACAGA-CA GAGA TGATCCGCACTCATTGTAATTTAGG TTTTGCCTGCTTTAT 100 118
        bglS 3890585 .. 3890609 - -12.2  -3.57783   TCATTACAATCATAA          GAGCCTGCTA TATTG CAGCAGGCTC          TTTCACATTTGGCAT  90 40
 JR441_19925 3886897 .. 3886915 -  -6.8  -4.25104   TGCTCCTTATGAAAA             GTATCTTC CTT AAAGATAC             AGGAGCCGATCAAAT  73 35
 JR441_19920 3886563 .. 3886579 -  -7.3   -5.7946   TTTCCAATAAAAAAA              GAGACAC AGG ATGTCTC              TTTTTTTACTGTTTG 100 31
 JR441_19915 3885734 .. 3885763 - -10.8  -2.70946   GTGTGGTAGAAACAT       TGAGCCATATCC CTTTTC GGATATGGCTCT        TTTCATTATTGATAA  78 31
 JR441_19905 3883036 .. 3883062 - -12.4  -5.14965   ATTCCGATTAAAAAA         GGAAAGCTCC TTTTTTC GGAGCTTTCC         TCTGCCATTCATTTC 100 34
 JR441_19900 NONE
 JR441_19895 NONE
 JR441_19890 NONE
 JR441_19885 3879283 .. 3879312 -  -5.8  -5.92399   TAAGAAAAGAAAAAA       CACACTTGATTCC CTAGC GGAG-CAAGTGTG       TTTTTTATGTCATTG  93 35
        galE 3870178 .. 3870199 - -14.5  -3.53012   CCCTTGTTCTTTAAA           GGCCTTCTC TATT GAGAAGGCC            TCCATTCTTATTCCG 100 33
 JR441_19830 3868154 .. 3868178 -  -7.9  -5.37593   TTCTAAATGAAAAAA          TCCCTCTGC TTCAAGT ACAGAGGGA          TTTTTCTTTATTTAG  95 33
 JR441_19820 NONE
        msmX 3864359 .. 3864380 - -14.5  -5.27779   TTCAATAGCAAAAAA           CCGGACATG TCTC CATGTCCGG            TTTTTTTGATCTTAT 100 37
 JR441_19810 3863311 .. 3863326 -    -6  -5.09259   CATCGGAAAATAAAA              GCCGCC AGCA GGCGGA               CAGCGGGTATTTCGG  83 145
        cydA NONE
        cydB NONE
        cydD NONE
        cydC 3853605 .. 3853624 -  -9.3  -5.63517   TTTTCAAACAAAAAA            GACAGCC TTTTAG GGCTGTC             TTCTATTTTACAGGA 100 28
 JR441_19770 3852681 .. 3852703 - -12.1  -4.71426   GGGGTATCAAGAAAA           GCTGTCTTC TCTCT GAAGACAGC           TTTTTTATCATTCAA 100 33
        sigY NONE
 JR441_19755 NONE
        yxlD NONE
 JR441_19745 NONE
 JR441_19740 NONE
 JR441_19735 3847952 .. 3847970 -    -3  -2.94099   GGTTTGCATCACACA             CGCCTG TATTGGG CTGGCG             CTCGGCTTCGTTTTT  42 262
 JR441_19720 NONE
 JR441_19715 3844345 .. 3844364 - -10.7  -5.64274   TGACCTATAAAAAAA            CAGCCGG GATCAG CCGGCTG             TTCTAGATGCGGACA 100 15
        licR 3842197 .. 3842216 -  -6.6  -2.82516   GTTGCTATCATCATA            TTATGAAA TCGC TTTCATAA             ACACTCAGGGTTTTT  58 75
 JR441_19705 NONE
        celB NONE
 JR441_19695 NONE
 JR441_19690 3838743 .. 3838782 -   -16  -3.54408   GCTGACTGAAAGCAA  GTAAGAAAAAGCCGGCCCA GTA CAGGCCGGCTTTTT-TTAC  GCTTCAATTTTGTTG 100 22
 JR441_19650 NONE
 JR441_19645 3830962 .. 3830982 - -12.5  -5.80364   ATTGTAACAAAAAAA            GACCGCACG AAA CGAGCGGTC            TTTTTTATTATCGGA 100 33
        ywaC 3830192 .. 3830211 -  -9.3  -5.99154   TATCAAATAAAAAAA            GACGGCA CTTGGT TGCCGTC             TTTTTTAATCCACTT 100 30
 JR441_19620 3825781 .. 3825801 -  -5.5    -3.494   GAATGTGTGATACAA            CAAAAAAGG TGT CATTTTTTG            AAGATGCGATAAAGC  58 16
 JR441_19615 3824783 .. 3824805 - -10.7  -5.76237   GAGACAAACAAAAAA           CGCTTTTGA TCATC TCAAAAGCG           TTTTTTTATATCTGT 100 42
        celB 3818534 .. 3818563 -   -13  -2.90496   CTTTCGTTTAAAGGA       GATGATCAGCCC TATGAC AGGCTGATCATC        TATCACATCACATTT  86 28
 JR441_19590 3817780 .. 3817805 - -10.6  -6.24157   AGCGATAAAAAAAAA         GAACGTACAT TTTGTG ATGTACGTTC          TTTTTTTATCTATAC 100 31
 JR441_19580 3816056 .. 3816076 - -10.4  -6.02914   TCTACATAAAAAAAA            GCTGCCCC TGAAC AGGGCAGC            TTTTTCATTATTTTT 100 33
 JR441_19555 NONE
        thiM NONE
        thiE 3810923 .. 3810943 -  -7.6  -5.38497   ATGGAAAGCAAAAAA            GCTGTCCT TTTAC AGAACAGC            CTTTTGAAGGAAGAA  95 47
        efeU NONE
        efeM NONE
        efeB 3806920 .. 3806937 -  -9.9  -3.59262   GTCGACACGCTGAAA             GAAGCCT GTAA AGGCTTC              TTTTATGATTCCAGC  80 28
 JR441_19525 3806029 .. 3806046 -  -9.9  -5.85737   ACAGGAATAAAAAAA             GCTCTCT TTAT AGAGAGC              TTTTTCCTTGTCTTT 100 15
        slrC NONE
 JR441_19500 3802124 .. 3802139 -  -2.6  -2.58418   TCTCCATAGAAAACG              GCAG-AT CAT ATGCTGC              TGTCCTCTGTCATAC  41 35
 JR441_19495 NONE
        galT 3799340 .. 3799362 - -13.5  -4.93595   ATAAAAATCGAAAAA           GCCTCAACC CTAGC GGTTGAGGC           TTTTGACTGGTTTGG 100 12
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD 3794544 .. 3794563 - -12.2  -5.27399   GAAGACAGCAAAAAA            CCCTCTTC CAAT GAAGAGGG             TTTTTGTATTATTCG 100 34
        rodA 3792561 .. 3792582 - -10.9   -5.7946   CTCTGAACAAAAAAA           GACAGCCTC TGTA AAGGCTGTC            TGCATATTAAGAATT 100 32
        nfsA 3791710 .. 3791727 -  -9.1  -5.19879   CGTGAAACATAAAAA             CCCCTCC AGAC GGAGAGG              TTTGCTTTAGTTTTT 100 32
 JR441_19445 3790528 .. 3790548 -   -14  -5.29445   GTTGAATAAGAAAAA            GCCCTGCC CAATC GGCAGGGC            TTTTTAAAGATCAGT 100 36
 JR441_19435 NONE
        sacT 3786366 .. 3786389 -    -6  -5.84381   TGATCAATAAAAAAA          CTTCCAGAGA TCAC TCCCTGCAAG           TCAAAGCGGTTATTC  93 35
        scrA NONE
 JR441_19415 3782455 .. 3782469 -  -2.9  -4.84311   TTTCACATAAGAAAA               TAGAA GGATT TTCTA               CATAAGTGTCCAAAT  65 23
 JR441_19410 3782101 .. 3782119 - -13.2  -5.36441   TTTTCACAGAAAAAA             CTGCCGAT CCC ATCGGCAG             CCTGTTTATTTGATT 100 31
 JR441_19400 NONE
 JR441_19395 3779511 .. 3779527 - -12.3  -5.65927   TACTCAAATAAAAAA              GCGCAGA GTA TCTGCGC              TTTTTACAAATCCTT 100 29
 JR441_19385 NONE
 JR441_19380 NONE
 JR441_19375 3775840 .. 3775867 - -12.2  -5.64304   CAAGATAAGAAAAAA        GCCAATCACTCAT ATG ATGAG-GATTGGC        TTTTTTGATTATAGA 100 34
        spsA NONE
 JR441_19360 NONE
 JR441_19355 NONE
 JR441_19350 NONE
 JR441_19345 NONE
 JR441_19340 NONE
 JR441_19335 NONE
 JR441_19330 NONE
        rfbB NONE
        rfbD NONE
 JR441_19315 3764783 .. 3764807 -  -3.6  -5.51165   AAAAGGGCAAAAAAA         GTCGAAGATGC CTCT GC-TCTTCGAT          TGATCACGTTCCTAT  81 43
        bslB 3763996 .. 3764018 - -11.4  -5.66684   GAATCCACAAAAAAA           GAGACTGAAA ACA TCTCAGTCTC           TGACTACAAATCTAT 100 44
        rocG 3762555 .. 3762571 -  -3.7  -4.89063   TTACGCAAAAACAAA              TGCAAAA TTA TTTTGCG              GAGGCTTCTCAAATT  69 39
        pruA 3760768 .. 3760795 - -12.1  -3.81062   ATCAAAAAGTTGAAA        TCGTGCGATCC GCTAAA GAATCGCACGA         TTTTATTTCTCTCAA  93 42
 JR441_19295 NONE
 JR441_19290 3757599 .. 3757620 - -15.9  -5.52909   TAACACGTAAAAAAA           GCTCTCCGG CCTC CCGGAGAGC            TTTTTCTATTGCGCC 100 31
 JR441_19285 3756134 .. 3756147 -  -6.7  -6.04953   ATACAAACAAAAAAA               CCCTT TAAA AAGGG                TTTTTAATTATAGGA 100 56
        bacA NONE
        bacB NONE
        bacC NONE
        bacD NONE
        bacE NONE
        bacF 3750122 .. 3750143 - -14.5  -5.07941   AAAAGCATATAAAAA           CATCCCGCT TTTT AGCGGGATG            TTTCTTGTAATGACC 100 15
         pta 3747161 .. 3747184 - -14.6  -5.11033   CAGAAGCGCAAAAAA          GGCAGCCCTC GGTC GAGAGCTGCC           ATCGTCTTCATTTTT 100 42
        cysL NONE
        ywfL 3745225 .. 3745253 - -11.7  -5.36441   GCTTGAGATAAAAAA        TGCATGCCGGC ATATACA GCCGGCATGCG        AAGAACGTTCACCCA 100 34
 JR441_19225 3744071 .. 3744096 - -10.5  -5.06505   AATGACATAGAAAAA         TCCCAAAACGG GCAG CTGTTTTGGGA          TTTTCGCCATGTACA 100 133
 JR441_19215 3742807 .. 3742827 -  -5.4  -5.26875   TTGTGAAGCAAAAAA           GCCT-GACC TGAG GGCCGAGGC            TAAGAAAAAATATGT  86 43
 JR441_19210 NONE
 JR441_19205 3740810 .. 3740836 - -13.2   -5.7946   TTGTCAATAAAAAAA         GCAAAAGAAACG ATT CATTTCTTTTGC         TTGGTATGGTTAACA 100 35
 JR441_19200 NONE
 JR441_19195 3738573 .. 3738602 -  -4.3  -5.71712   GTTCATATAAAAAAA       CACACCCATCCCTC TAA AAGGGACGAATG-G       TTGATCATCCGTGGT  86 293
        thrS 3736089 .. 3736100 -  -4.4  -4.86862   GTCAAAAAAGCAAAA                TGTG AATT CACA                 GCTTTTATCCTACAT  71 35
 JR441_19185 3735539 .. 3735559 - -11.8  -3.90729   AATAATCTCTATAAA            GCCGGCGC TTCGC GCACCGGC            TTTTATTATCCCTAT  91 37
 JR441_19175 NONE
 JR441_19170 3733918 .. 3733956 - -10.4  -4.57837   ATATCCCCCTAAAAA   TGAAAAACCCCGAGTC TTGTTTC GGCTCGGGATTTTCCA   TGTCCTATTTCTGTA  95 109
        speE 3730609 .. 3730629 -    -9  -5.00616   CTTTCCTGTAAAAAA            GCGCAAGA TTCGC TCCTGCGC            CATACCTTCATTATT 100 36
        speB 3729681 .. 3729701 - -14.1  -5.45652   ACTGGGAATAAAAAA            CATCCAGAC ATC GTCTGGATG            TTTACTTAATTCACA 100 31
 JR441_19135 3726265 .. 3726277 -  -3.4  -2.70354   CCTTTTAGAAATGCA                CAAC ATATA GTTG                ATTAAATCGCAATAG  43 27
 JR441_19130 3724373 .. 3724421 -  -6.8  -3.91164   AATCCGTGAAAAACA TGACAGCAGCTTTTCAGAAACT CACAC AGTCTCATCAAAGCTGCTGTGA CTTTCAGCAACACAA  68 467
 JR441_19080 NONE
 JR441_19075 3715476 .. 3715499 - -11.8  -5.60993   TTTCTCATAAAAAAA          GGACAAAGCC CGAA GACTTTGTCC           TTTTGATCGTGATTA 100 38
        narK NONE
         fnr 3713348 .. 3713367 - -10.8  -5.55698   CACAAGGTAAAAAAA            CAAGGACA CCGC TGTCCTTG             TTTTTTTCAGTCAAT 100 32
        arfM 3711993 .. 3712013 -    -9  -5.66989   CAAAGATCAAAAAAA            CCGGCTCT ATTTA AGAACCGG            GCTCGGCGTTTTCAT 100 15
 JR441_19050 NONE
        narH 3706680 .. 3706698 -  -4.4  -4.06781   ATCAAAAGTTAGAAA             CAGGAGCC GGG GCCGCCTG             AAAATGATAAGCCGC  61 0
        narJ NONE
        narI 3705403 .. 3705421 -   -11  -5.82172   ATCAAGATAAAAAAA             TCCCCCTC TTC AAGGGGGA             TTTTCACGAGCGTTT 100 29
         cls 3703410 .. 3703425 -  -6.8  -3.48276   TTTTTTCTTACAGAA              CACCTG AAAA CAGGCG               GGCAAATGACTCTTT  64 2
 JR441_19025 3701433 .. 3701448 -  -7.6  -3.04398   GCTCCGCCCTAAAAT              GACTGT ATCA ACAGTC               TGATAAAAATCACTG  65 163
 JR441_19000 NONE
        acdA 3694952 .. 3694964 -  -3.4   -3.0516   TATCAATAATGAAAG                CGAT TTTGT ATCG                TTCTTATACAAACCA  45 140
 JR441_18990 3694244 .. 3694271 - -17.2  -4.67697   GGTGAAAATAAGAAA        GCTCCCTTTCAA TTTC TTGAAAGGGAGC         ATAACGTACTATGTT 100 126
        pyrG 3692486 .. 3692515 -    -8  -5.85425   GAAACAAATAAAAAA       GACTTGCCCGCTT TTGAC AAACGG-CAAGTC       TTTTTTATTACTTCT 100 33
       spo0F NONE
 JR441_18970 3690298 .. 3690320 - -13.4  -4.27861   AAGATAGACGGAAAA           CCGCCTGTCA AGC TGTCAGGCGG           CTATAAAAAGTTCCA 100 47
         fsa 3689542 .. 3689578 -  -8.8  -4.32857   TCGGTGAAATACAAA   GGCCGCGGCAAACAG GCATAAAG CTGTTTGCCGCC-CC    TTTCATTATTTGTTC  83 31
 JR441_18960 NONE
        glpX 3686892 .. 3686907 -  -8.2  -3.92659   TCTGCAAAAGTTAAA              GCGGGC TCAC ACCCGC               TTTTTCTGTTTGTTA  77 38
 JR441_18950 3686505 .. 3686519 -  -3.6  -2.52681   AGAGGAAATAGATAC               GTCTTT CAT AAAAAC               ACCACGCTTTTCATA  45 50
         rho NONE
        rpmE 3684873 .. 3684895 -  -9.2  -5.53436   AGACAATATAAAAAA           CAGGCAAG ACTGCTG CTTGCCTG           TTGAGAAATCTATTA 100 41
 JR441_18935 3684186 .. 3684206 -  -5.4  -6.12328   AGAATATAAAAAAAA            CACCGG TGTTTTTAG CCGGTG            CATTCTATCTTTATA  95 54
        malS 3682216 .. 3682230 -  -4.2  -3.50133   TAGCTTTACAAAAAG               CTTTCC CTC GGACAG               AAAAATTTACTCGCT  55 43
 JR441_18925 3681181 .. 3681198 -  -9.1  -5.01042   AACCTAAAGCAAAAA             GCTCCCC GTAA AGGGAGC              TTTTTTTGTTACGCA 100 34
        prfA NONE
        prmC NONE
 JR441_18900 3677673 .. 3677691 - -13.2  -5.44119   TTTACTGCAAAAAAA             GGAAGCCT AAG AGGCTTCC             TTTTTTATTAAAACA 100 33
      spoIIR 3676485 .. 3676496 -    -3  -3.69094   AATCTATGAGGCAAA                TCTA TTTT TAGA                 CCAGATGATTAGGAA  50 34
 JR441_18885 3675928 .. 3675960 - -12.1  -4.63218   TGTCCTGTAATAAAA      CAAGCGTTATCCACA AAT TGTGGACAACGCTAA      TGAAGAAGTGGATAA 100 60
 JR441_18880 3674727 .. 3674781 -  -6.6  -4.17296   TCCGACATACATAAA TAACCCCCTT-GGACACGC-CCCGCT TTTTT AGCCTATGCGTGTCCAAAAAGGGTTA GAACATCTGACTGCT  70 42
 JR441_18875 3674130 .. 3674148 -  -4.6   -5.5353   TATATGAAGAAAAAA             GAAACG GCGACTT CGTTTC             TTTTATTGGTATATT  84 39
 JR441_18870 3673610 .. 3673621 -  -2.2  -2.91873   AGGATTTGCAAATGA                CCTG TTTG CAGA                 TTTTCTGACAACTTA  41 38
        rpiB NONE
 JR441_18860 3672449 .. 3672474 -  -8.4  -5.07652   TGTCTTAAAATAAAA         GAAAAGACTG GCTATG CAGTCCTTTC          ATTCGCACTCATAAA 100 24
        glyA 3670984 .. 3671008 - -12.1  -5.04987   AACATCGTCAAAAAA          CCCGCCGGG CATAAGC CCCAGCGGG          TTTTAGGATCTTAAT 100 36
         upp 3670227 .. 3670250 - -11.8  -5.63504   AACTGGATAAAAAAA          TGAAACCCCC TTTT GGGGATTTCA           TTTTTTATTTTGTTC 100 30
        atpI NONE
        atpB NONE
        atpE 3668390 .. 3668421 -    -3  -3.67481   TCAGACATAAAGCAA      TGGCGAAGGTTCTCT TGG AATGATC-TTCGCCA      TTTTTAGTTCATATA  50 53
        atpF NONE
 JR441_18825 NONE
        atpA 3665667 .. 3665693 - -13.2  -4.57569   TCATCTGCGTAAAAA         GAGAGAAAAAGA GAA CCTTTTTCTCTC         ATCAGCATTCGAGTT 100 39
 JR441_18815 3664777 .. 3664789 -  -6.2  -3.59979   TCTTTCTATTCTAAA                GCGG CTGCT CCGC                CGACAATTTCCGTAA  61 3
        atpD NONE
 JR441_18805 3662870 .. 3662890 -  -9.8  -5.60993   TCGTTCATAAAAAAA            TCCTTCTC ATAAA GAGAAGGA            TTTTTTCTTATTTCC 100 33
 JR441_18795 3661987 .. 3662004 -  -2.1  -4.16921   GAATAATGTTCAAAA             CCTAT-TA AAA TAGATAGG             GAAGCTGCTGTGAAT  53 12
 JR441_18790 NONE
        murA 3659734 .. 3659758 - -10.1  -6.07374   ACAAAAAATAAAAAA          CCAGTATGCCA GAG TGACATACTGA          TTTTCAAGTAAGTTT 100 39
      spoIID 3658515 .. 3658547 - -16.5   -3.2247   AAAGATATTCAGGAA      CAGAAAAAGACGCCC AAT GAGCGTCTTTTTCTA      CTTTTTCGCCATATA 100 23
 JR441_18775 3657447 .. 3657468 -  -8.7  -5.03994   TGTTACATACAAAAA           GAGGCTGAC CATC ACCAGCCTC            TTTTTTCTTATTTAG 100 33
 JR441_18770 NONE
 JR441_18765 3656445 .. 3656462 -  -6.2  -4.50353   AAACCAATAAAATAA             GGCGCC TTGGGG AGCGCC              TGATCTTTAGGTTCC  73 41
 JR441_18760 3656070 .. 3656091 -  -5.1  -5.03994   TCTGAGACACAAAAA           GAGCCCTCT ATAT AAAGGGCTT            TCACAGGATGTGATG  76 156
        fdhD NONE
        moaA 3654123 .. 3654146 -  -8.9  -5.46657   GATTCTAATAAAAAA          GCTTACCGG ACAGTG CCGATAAGC           TTTTGACTTCAAATT 100 39
        rapB 3652810 .. 3652827 -  -9.9  -6.22802   TTGCATAAAAAAAAA             CCATCTG CCAG CAGATGG              TTTTGTCTCATACTT 100 33
 JR441_18740 NONE
        csbD 3651904 .. 3651928 -  -7.9  -6.79027   GCGAAAAAAAAAAAA          GACAAGAAACA TTT CGTTTCCTGCC          TCTTCCGTACGATTA 100 38
        ureA NONE
        ureB NONE
        ureC 3648506 .. 3648526 -   -14  -3.68988   TTTTAGTCAATAGAA            CGGCCGGA TGCAC TCCGGCCG            CGTCTTATCAAAATA 100 33
 JR441_18705 3647985 .. 3648010 -  -9.9  -2.57931   TTTAGCGGTGAGAAG         TCATCCCTTTT GATT AAAAGAGATGA          TTCATAACATCTTTT  74 13
 JR441_18700 3647258 .. 3647287 - -13.7  -2.79276   AGCACTTATTAATGA       GAAAAACCCGGAG CTGG CTCCGGGTTTTTT        ATTATTCCGCTTCGC 100 27
         mta 3645936 .. 3645971 - -19.9  -2.53822   CCGATCTTATAAGAT    GCGAAAACCCCCGGCC TTTAC GGCCGGGGGTTTTC-C    TGATGGTCACAGTAA 100 7
 JR441_18680 3643758 .. 3643798 -  -9.7  -5.47218   CTGCATGCAAAAAAA  CACACCCGGATCGTCTGGA AAA TCTCAACAATCCGGGTGCA  GATCTTCTTTAATAC 100 34
      spoIIQ 3641471 .. 3641491 -  -5.4  -5.82172   AGTAACAGAAAAAAA            CGCCCATC ACAAG GATAGACG            TTTTCTTCATTAAGA  91 35
 JR441_18655 3640939 .. 3640966 -  -9.2  -4.89838   CTAAGAAAGACAAAA        GCCGGC-GTCT GAAATCA AGACAGCCGGC        TTTAATATTTTTCAT 100 27
 JR441_18635 NONE
 JR441_18630 NONE
 JR441_18625 3635712 .. 3635735 -  -7.4  -5.38549   CTTAAACAAGAAAAA          GAGACAGACC TCAG AGCCCGTCTC           TTTCTCAAGATGCAG  95 30
        pucI NONE
 JR441_18615 3632536 .. 3632568 - -12.1  -5.36441   TTTGCATATAAAAAA     CGGCGTCCCTCTCG GTTGAA CGAGAG-AACGCCG      CTTATAGCAATTATT 100 36
 JR441_18600 NONE
     spoIIID 3630088 .. 3630098 -  -5.4  -3.04517   ATCCTCCTTGAAAAT                 CTGT TTC ACAG                 TAAATATCCACATTG  53 157
         mbl 3629031 .. 3629053 - -10.7  -5.60993   TTTTTCATAAAAAAA           CCTCATTCT TTTTC AGAATGAGG           TTTGTGAAATCAGCT 100 35
        flhO NONE
        flhP 3626878 .. 3626889 -    -3  -4.07437   AAAAGTATTAAAGAA                TCAA GAAT TTGA                 AATGAATTCACCAGT  56 382
        fabZ 3625507 .. 3625532 -  -6.9  -5.95539   TTGTAAAGAAAAAAA         GACAAATGTGCC GCT GGC-CATCTGCC         TTTTTTCAATTATTC 100 35
        mscL 3625049 .. 3625069 - -11.9  -5.72616   ATTGAGATAAAAAAA            GACGCCGTT TCT AACGGCATC            TTTTTTATTCCGGCG 100 30
 JR441_18555 3623500 .. 3623520 - -15.5  -5.14563   TTCTGCATGAAAAAA            GCTGCCGTT TTG AACGGCAGC            TTTTCTTTTCGTGCT 100 56
        ywpG 3622437 .. 3622449 -  -3.3  -4.67168   AAAAACGCTTAAAAA                TGGCT TTC AGCCT                CTGTTTTTATCTTTC  64 19
         ssb 3621938 .. 3621954 -    -8  -4.52502   GGCAAAAAGAAAGAA              CCAGTC TGGTC GACTGG              TCAATTTTGAGGGGA  82 96
        glcR NONE
 JR441_18530 3620049 .. 3620069 - -15.5  -5.19212   ATCATGACTAAAAAA            GCTGGCTCT GAT AGAGCCAGC            TTTTTTCCGTTCATA 100 118
 JR441_18515 3615298 .. 3615318 -  -8.3  -5.60993   CCTCGCATAAAAAAA            TCCCGCA AAAGGCG TGCGGGA            TTTTTATGTTGCATA 100 29
        tkmA NONE
        ptkA 3613614 .. 3613642 - -11.9  -4.56597   CTTTTTTCGCAAAAA        TAAATAACGGGCA CGA TGCACGTTATTTA        TTTTGCATGAAATTG 100 19
 JR441_18500 3612651 .. 3612665 -  -5.6  -2.85503   CTCCAACAGTTAAAT               TGCTGC TTT GCAGCT               TCCGTAATATCGTAT  52 183
        uglF 3611275 .. 3611293 -  -6.7  -5.62219   AATAGATGAAAAAAA             GACTGGT GCGCA ACCAGCC             TTTCTTTTTCAACTA  93 38
 JR441_18490 3610090 .. 3610114 -  -4.3  -3.62864   TAAAGGCACTTGAAA          GAGGCAGAT GTTGTTG ATCTGTCTC          TTCTTATTTTATGGT  55 228
 JR441_18485 NONE
 JR441_18480 NONE
 JR441_18475 NONE
 JR441_18470 3606592 .. 3606620 -  -9.5   -5.4182   AATGAGAAACAAAAA        CGCCAGCCCTTGG TGT CCATAGACTGACG        TTTCTTGAAAACCTC 100 43
 JR441_18465 3605775 .. 3605792 -  -5.6  -5.11613   ATATCATTGAAAAAA             GCAGAT AGTATA ATCTGC              TTTTTTATTACTATT  81 36
 JR441_18460 3604951 .. 3604976 -  -5.5  -5.77988   ACACATACAAAAAAA         CACTTGATGACT TAG AGCC-CCAAGTG         TTACATGTGATTTTT  88 26
 JR441_18450 NONE
 JR441_18445 3603103 .. 3603118 -    -9  -5.38047   CATTTATAGAAAAAA              GCACCT GGAC AGGTGC               TTTTTTATTTTGGCC 100 30
         ggt 3599265 .. 3599292 - -14.2   -5.9663   AAATATCAAAAAAAA        GAACACCCAGAG TAAG CTCGGGGTGTTC         TTTTATGAAACGTTT 100 422
        cotH NONE
        cotB 3595259 .. 3595281 -  -3.4  -4.74103   CCTTTAACTGAAAAA           GGGCATCA CTTATTC TGATGCTC           CTCCATTATCTATTA  67 38
 JR441_18395 3594521 .. 3594545 -  -5.7  -5.01811   GTATGAAACGAAAAA          CTGCCTTCT GCTTTTA AGAGGGCAG          TTTTGTATACACTAG  78 37
        alsS NONE
        budA 3589321 .. 3589344 -  -8.2  -5.31519   AGAGCCAAATAAAAA          GAAAGCCC TGTAAAAG GGGCTTTC           TTTTTTTCTTTTATT 100 36
 JR441_18370 3588695 .. 3588726 - -16.7  -4.42806   GGATTTTTAAACAAA      TACAGCCCTGCCG TATGTT CGACAGGGCTGTA       TTTTAAACAAAAGGC 100 28
        pgsB NONE
        pgsC NONE
        pgsA NONE
        edmS 3578162 .. 3578185 -   -14  -5.27335   CTGGGCAAATAAAAA          GAGAGTGTCT CATC AGACACTCTC           TTTTTTGAATTATTT 100 35
        pgdS 3576786 .. 3576804 -  -8.9   -5.0065   TATGCATAAAGAAAA             GACTCCA GAGAT TGGAGTC             TTTTTCTTTTATTGC 100 34
 JR441_18290 3573063 .. 3573084 - -13.7  -4.50193   AGTAAGCAATCAAAA           GGGTGCGCA TGAT CGCGCACCC            TTTTTTATGTTCCGA 100 30
        manA 3568129 .. 3568151 -  -9.3  -6.09888   TTCTAATAAAAAAAA           CTTAATCTC GAAGT GAGATTAAG           TTTAAATATGAGACA 100 27
        lytD 3565351 .. 3565374 -   -14  -5.08367   AAGATAAATCAAAAA          CACCTTTTGC AGCC GCAAAAGGTG           TTTTTTTTATCGATA 100 32
        tagD 3557508 .. 3557526 -  -4.6  -6.01369   CAAACAAGAAAAAAA             GAAGCAAC TGA ATTACTTC             AAGCCTCTTTAAGTT  95 48
 JR441_18225 NONE
 JR441_18220 3554846 .. 3554857 -    -3  -4.62313   TAAAAGTAAAAACAA                TTAG AGTG CTAA                 ATTTTTGAAAACACA  62 75
        ggaB 3552017 .. 3552048 - -15.4  -4.09685   TTTCACTTTTGAAAA      GTAAAGAGAAGTCC CGCA GAACTTCTCTTTAC       TTTAAAGTGTCAGTA 100 56
        tagG NONE
        tagH 3549446 .. 3549471 - -12.7  -5.34381   AAATCTAAACAAAAA         GGCTATTGGAC ATTC ATCCAATAGCC          TTTTTTTATTTCAAC 100 31
 JR441_18195 NONE
 JR441_18190 3545262 .. 3545276 -    -5  -4.11394   ATTTCATTCGCAAAA               GCTCAT ATA ATGAAC               AAAAATGATGCAAAA  63 46
 JR441_18185 NONE
        wecB 3542115 .. 3542141 -   -16  -5.56372   AAAGTAAAACAAAAA         GAAGCTTCGCAC AAT GTGCAAAGCTTC         TTTTTTATTTGCCTG 100 30
 JR441_18170 NONE
 JR441_18165 3538430 .. 3538454 - -15.1  -3.66349   AAATCAAATAACGAA          CAAAGGAGGCA TCT CGCCTCCTTTG          ACTCTAACAATCTTT 100 40
 JR441_18160 3536829 .. 3536865 - -14.4  -5.26316   TTATCGTATAAAAAA    GCTTGCCGGCAATTCC TGATG GGTTCTGCCGGCAAGC    CGCTATTGATGTCTA 100 54
        tarQ 3534725 .. 3534752 - -11.5  -5.41143   TATTGTTTAAAAAAA        GAGACAAATCA TTTTAC TGATTTGTCTC         TTTTCGTTGTGAAGC 100 43
 JR441_18150 NONE
 JR441_18145 NONE
 JR441_18140 NONE
        tuaD NONE
        tuaE NONE
 JR441_18125 NONE
 JR441_18120 NONE
 JR441_18115 3525472 .. 3525497 -  -2.6  -3.78682   GTATAATCAAAAAAC         GCGCA-TCCCA ATTTA TAGGACTACGC         ATGTTTTTGAATCCC  50 20
 JR441_18110 3524248 .. 3524267 -  -7.1  -5.60993   TTGCGCAGAAAAAAA            CTCCGGC ACATAA GCCGGAA             TTTTTAATTCCTTTT 100 29
        degS NONE
        degU 3520190 .. 3520213 -  -8.9  -5.44119   GGCAGCCTAAAAAAA          GACCTGCCT AGTAAA AGGCAAGTC           TCCTATTATACTATC 100 36
 JR441_18085 3519253 .. 3519273 -  -8.3  -5.86465   AAGAATATAAAAAAA            TCTCCGCTC TAA AAACGGAGA            TTTGGCCTTATTTAA 100 33
       comFA NONE
       comFB NONE
       comFC 3516733 .. 3516751 -  -3.1  -4.84761   ATATCGGCATAAAAA             CAGAATC ATTTA GCTTCTG             ATCAAGGTAAAAGAT  67 16
 JR441_18065 NONE
        flgM NONE
        flgN NONE
        flgK NONE
        flgL 3512937 .. 3512955 -  -3.1  -5.71983   TGAACTATAAAAAAA            GCGAACTC CTGA GAGC-CGC             TTACTTTAAAAAGTC  84 26
 JR441_18040 NONE
        fliW NONE
        csrA 3511661 .. 3511681 -  -6.9  -6.23317   ACAAAAATAAAAAAA            TCCTCAC TTTTTTT GTGAGGA            TAATGTGGAGATCAC 100 8
         hag 3510649 .. 3510669 - -13.3  -4.68919   AAATATAAATTAAAA            GACCCTGGC AAC GCCAAGGTC            TTTTTTAAAATTAAC 100 36
        flaG NONE
 JR441_18015 3508599 .. 3508611 -    -2  -2.73124   TGTCATCCTCCAAAT                TACA TTTAT TGTA                CAAGAAGCTGTGATA  40 18
        fliS 3508180 .. 3508199 -    -2  -2.64735   AGTTGATCTATATTA            TTCATGCG ATCC CGCCTGAT             CCGTGCCGGTCCTTC  40 7
        fliT NONE
 JR441_18000 3507344 .. 3507354 -  -2.6  -2.51057   GCTGAAACATAAATC                 TTTT GTG AAAA                 TTCAGTGAACTTTGT  41 127
         hpf 3506663 .. 3506685 - -11.3  -5.74684   TAAGAAAAACAAAAA           CCTTCCGCG GACAT CACGGAAGG           CTTCTCTTCATTATT 100 36
        secA 3503956 .. 3503980 -   -15  -2.83772   ACCTCATTAAAAGAT         CCGCAGGCGCC TGCA GGCGCC-GCGG          TCGGTAAACTTGCCG 100 48
        prfB 3502800 .. 3502822 -    -7  -6.15536   AAGGAATAAAAAAAA           CACACCCG TATGCAT CAGGTGTG           TTTTTCAGCTTATGA 100 35
 JR441_17980 NONE
        cccB 3501398 .. 3501424 - -13.1  -4.91712   GTCAAGGCATAAAAA         CATCCTTGCCA GCACT CGGCAAGGATG         TTTTTATCTTACTTT 100 34
        ftsE 3500520 .. 3500530 -    -4  -2.76453   CGAGAATTTTAATCA                 TATG AAC CATA                 CTCCCCTCTTGACTC  46 8
        ftsX 3499593 .. 3499627 - -14.5  -3.95126   GAAAAAGAAGGCAAA    TG-AAAAGCCGTCCCG AAAA CGGAACGGCTTTTTCA     CTTTATACTCGCAAA 100 28
        ctpB 3498027 .. 3498046 - -12.2  -3.91213   AAGCACAAAGAAACA            GGAGATGG AATA CCATCTCC             TTTAATTGACAAATA  93 27
        swrA NONE
        minJ 3495999 .. 3496034 - -20.5   -4.2803   CAGCGTAACGCAAAA    CAGCCCGGCATCGCA TCTTCC TGCGGTGCCGGGCTG     CCTTTTATGATCCAG 100 30
 JR441_17930 3490754 .. 3490778 - -11.6  -5.24129   TTTGTGTATAAAAAA          CCTGCTTTTA AAACG TAAAAGCAGG          TATTCGGTCTTTATA 100 56
        uvrB NONE
        uvrA 3485694 .. 3485732 - -11.1  -5.27335   TGCCGTAAAGAAAAA  GCTTGCCTGCTAAGCCCA AGGA TGGACTT-GCTGACAAGC   TGTCCCCTCTTAACA 100 50
         hag 3484506 .. 3484545 -  -7.9  -5.80364   ATTGTAACAAAAAAA  GCCTGCCGGCACA-TCCA GTTAA TGGACTCTGTCGGCAAGC  TGTAACTATCAGAAA 100 58
 JR441_17905 NONE
 JR441_17900 NONE
 JR441_17895 NONE
 JR441_17890 3481897 .. 3481914 -  -8.4  -5.17054   AGAACATGTAAAAAA             GCTGCC TTTGCG GGCAGC              TTTTTTTATTTTTTT 100 31
 JR441_17885 3477837 .. 3477865 - -14.7  -5.93809   CTTTCATAAAAAAAA        GCCTCCAACCCTT TTT AAGGATTGGAGAC        ATGGCGAAAATCAAA 100 11
 JR441_17865 NONE
 JR441_17860 NONE
 JR441_17855 NONE
        ppaX NONE
        hprF 3471087 .. 3471110 - -12.5  -5.27477   ATTTTAACCAAAAAA          GTCCGCTGA TGTTAT TCAGCGGAC           TTTTTCAATCTTTCT 100 13
 JR441_17830 NONE
 JR441_17825 NONE
        hisD NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
 JR441_17795 3462726 .. 3462744 - -13.2  -5.54907   TTCACAAAACAAAAA             GAGCCGTA TCA TACGGCTC             TTTACTCTTCTTTCT 100 27
 JR441_17790 NONE
 JR441_17785 3459842 .. 3459854 -  -3.4  -3.09908   CTTTCTGAAAATAAG                GAAG TCACT CTTC                ATATTCCTCCTAAGG  45 35
 JR441_17780 3459453 .. 3459493 -   -10  -4.25104   TTGCCGTGATGAAAA  TAAAAGATCTCCCACTCA TTGTT TGAATAGGAGATTTTTTA  TGTTAGAGCACTGGC  86 28
        bmrA 3457508 .. 3457530 -  -8.5   -4.1964   CTCAATAGTTCAAAA           GGAAGGATT AGGAA AATCCCTCC           TCTTTTTTATTGGCT  81 55
 JR441_17770 3455946 .. 3455968 - -10.7  -5.99154   TATCAAACAAAAAAA           GAGTCGATT AAATA AATCGACTC           TTTAAAATTTACTAT 100 37
        cwlO 3454155 .. 3454177 -  -9.9  -4.68209   ATGTTAATAAAGAAA           GAGCCTTCT GTTTT AGAAGGCCC           TTGTCATATTTATTA  91 38
        trxB 3452880 .. 3452907 -  -3.5  -5.64274   TTATGGACAAAAAAA        GGACACGGAT AACTGGAGA ATCCGTG-CC        AAAAAAGTGTATTCA  84 153
 JR441_17755 NONE
        rapZ NONE
        mgfK NONE
        whiA NONE
 JR441_17735 NONE
 JR441_17730 3448325 .. 3448345 - -11.9  -5.18726   TGTTCATAAGAAAAA            GCTTGCAGA TAA CCTGCAAGC            TTTTCACGTTACAAA 100 34
        psdR NONE
        psdS 3446135 .. 3446148 -  -2.3  -4.91109   TCTTTATTATAAAAA               GGAAG TCAG CATCC                TCCCATCGAACTTTC  66 62
        psdA NONE
        psdB 3443379 .. 3443400 - -14.5  -5.09521   TCAATAAATCAAAAA           TCCGGTCTG ATAA CAGACCGGA            TTTCATATTACATAC 100 33
 JR441_17695 NONE
 JR441_17690 3439784 .. 3439800 - -10.8  -5.28778   AGCATGCATAAAAAA              GCGGCC GCGAT GGCCGC              TTTTTTTAACCTGTG 100 31
 JR441_17680 3438658 .. 3438680 -  -9.2   -5.7827   AAGAGAAATAAAAAA           GAGATTTCCC TTA AGGAAACCTC           ACTTTGTTAAAAACA 100 112
 JR441_17675 3437603 .. 3437613 -    -4  -3.76568   TTACCGATAACAGAA                 TAAG GCG CTTA                 CAGCGTTGATTCTCG  54 23
        mdxD 3435666 .. 3435676 -    -4  -3.62849   TTTACGAAACTATAA                 CAAT TGT ATTG                 TCCTATAGAAAGCGG  52 78
        mdxE NONE
        mdxF NONE
        mdxG NONE
 JR441_17650 NONE
        mdxK NONE
        malL NONE
        pgmB 3426651 .. 3426676 - -13.4  -3.88015   AAAGTAATAACACAA         CCTGCAAGAG CTGCGT CTCTTGCAGG          TTTTTTTCATTTCAA 100 54
 JR441_17625 3425661 .. 3425673 -  -3.3  -2.78794   CAAAAAAGACAAGAG                CGGCA AAT CGCCA                AACCCTTGTCTTTCC  44 56
 JR441_17620 3424682 .. 3424695 -  -6.7  -2.94218   AGCCTTGATCAGAGA               GTGGA GCTG TCCAC                ATACAATATAGGTAA  60 93
 JR441_17610 3423467 .. 3423487 - -11.9  -5.52384   CCTCTATTAAAAAAA            GGGGGACTA TAA TAATCCCCC            TTCCTTATAAATTAT 100 37
 JR441_17605 NONE
 JR441_17600 NONE
 JR441_17595 3420015 .. 3420027 -  -3.3  -2.78794   CAAAAAAGACAAGAG                CGGCA AAT CGCCA                AACCCTTGTCTTTCC  44 312
 JR441_17585 3416962 .. 3417006 -  -3.8  -5.04868   TGAAATGAAACAAAA CAAAAAAGACAA-GA-GTGGCA AGT TGCCAAACCATTGTCTTTCCTG TTGTTTGATTGGACG  72 132
 JR441_17580 3416320 .. 3416341 - -11.7  -3.75115   TCTTCATAAAATCAA           GGCATATAC AGCT GTATATGCC            TTTGCCATTAAGCTT  91 33
        racX 3408410 .. 3408435 -   -12  -5.82172   AGGAACATAAAAAAA         CAAGGACTGT TTGAAG ACAGTCCTTG          TCTGAAGCTAGCTTT 100 33
 JR441_17535 NONE
        padC 3407298 .. 3407339 - -14.7  -4.76041   CATACTCAGCAAAAA GAAAACCCGGAAAAGAGAA GTAA TTCTCTTTTCTGGGTTTTT  ATGTTTATTATAATC 100 33
 JR441_17510 NONE
        epsB 3403408 .. 3403426 -  -7.4  -3.10894   ACGACCAGCATCTAA             GGCAGC AACTTCA GCTGCC             CACAGCAGAGCCGAG  62 84
 JR441_17500 NONE
 JR441_17495 NONE
        epsE NONE
 JR441_17485 NONE
        epsG NONE
 JR441_17475 NONE
 JR441_17470 NONE
 JR441_17465 NONE
 JR441_17460 NONE
 JR441_17455 NONE
 JR441_17450 NONE
 JR441_17445 NONE
 JR441_17440 3389130 .. 3389156 - -11.7  -4.80487   GAGAATCAAAATAAA        CCTTCC-GCTCA CATG TGAGCAGGAAGG         TTTTCCTTCTTTGAG 100 7
        rpoN 3387500 .. 3387518 - -10.3  -5.41143   GATTCCTTAAAAAAA             TCCTCCC GTCTA GGGAGGA             TTTTATTTATATCGC 100 28
        lutR 3384777 .. 3384800 -  -9.6  -4.65895   TGCCTCATGTAAAAA          GACTGAACCA TTTG CGGCTCAGTC           TCAGTTGTTCGTATC  91 78
        ganR 3383656 .. 3383675 -  -9.4  -5.65927   TACCTAAATAAAAAA            TGACTTAG TGTC CTAAGTCA             TCCTTAATTCATACT 100 29
        ganS 3382041 .. 3382053 -  -5.5  -4.91109   CCGCCAGCAGAAAAA                CGGAA TTA TCCCG                CGGCACTTCTGTTCC  78 245
        ganQ NONE
        ganA 3378011 .. 3378029 -  -8.8  -4.77122   TTATAGAAAAAAGAA             TCCGCCCA TAT CGAGCGGA             GCATCAGCCTAATGT 100 34
        ganB 3376617 .. 3376660 -  -9.8  -5.10933   TGATGTAAAATAAAA TGATCCATGAGACATAACAA TGAT TTGTTACATCTCATGGATTT TTTTGTTTCAGCGTT 100 33
 JR441_17375 NONE
 JR441_17370 NONE
        yvfT 3371485 .. 3371504 -  -3.6  -3.72374   CCTCAGCAATAAACA            GACGAA TCATTCTT TTCGTC             CTCCAATCATTCTGC  54 32
        yvfU 3370860 .. 3370881 -  -8.7   -4.8048   GTGGCATATCAAAAA           CACTCCCGA TCTC CCAGGAGTG            CAGCATATGGTTAAA 100 36
        lutA NONE
        lutB NONE
 JR441_17345 3367782 .. 3367803 -   -13   -4.8622   TTTTTCAAGCAAAAA           GCCCGGCA TATGCC TGCCGGGC            TTCCTGAGTTCAGCG 100 35
 JR441_17340 3366310 .. 3366353 - -14.8  -5.93252   TTCAAAAACAAAAAA GCCCGCCGTCTC-CTACCTAT CTA ATAGATAAAGAGACGACGAGC CTTCGGCTGACCGCG 100 343
 JR441_17335 3364893 .. 3364918 - -19.1  -5.34365   GCACAATAATAAAAA         CCCTCTTGCCG GATG CGGCAAGAGGG          TTTCTTATTTACTGA 100 34
 JR441_17325 3362979 .. 3363008 -  -7.2  -3.83346   ACAATATAAAACGAA       CGGTTTGGAACA TTATTC TGCTCCAAACAG        ATCCTTAGCCATCTC  71 8
 JR441_17320 3361780 .. 3361808 -  -6.8  -5.87996   GAATGAATAAAAAAA       GCAATGTA-TGGG TCTC CCCGCTACATTGC        TTTTTTTTATAGCTG  93 41
        araE 3359048 .. 3359071 - -13.2  -4.20368   GCATCCCAATATAAA          CAGCCCTTCC CGTA GAAAGGGCTG           TTTCATTAAAGCGTT 100 42
        cggR NONE
         gap 3356624 .. 3356648 - -12.2  -4.65895   GTCTTCATGGAAAAA          GGGAAAGGGA GTCCG TCCCCTTCCC          TTGTCCGCTTTCATT 100 91
 JR441_17295 NONE
 JR441_17290 NONE
        gpmI NONE
         eno 3351541 .. 3351563 - -11.2  -5.24531   AGTTTGCATAAAAAA           GCCGCCGAGA AAA TCCCGGCGGT           CTTTTTATTACTTGT 100 33
 JR441_17275 3350095 .. 3350108 -  -8.1  -4.75063   AGAAAATTTTAAAAA               CAGGC CGAG GCCTG                TTTTTTAATCTATAT  95 30
 JR441_17270 3348489 .. 3348499 -  -2.6  -3.39908   GTCTGTGAAAAGAGA                 TAAA TTG TTTA                 CTAATGACAGTTCCC  46 43
 JR441_17265 NONE
 JR441_17260 NONE
 JR441_17255 NONE
 JR441_17250 NONE
 JR441_17245 NONE
 JR441_17240 NONE
 JR441_17235 NONE
 JR441_17230 3340771 .. 3340797 - -11.7  -4.64676   GGATCTTTAATAAAA        GAGCTGCCGCAT GATC AT-CGGCAGCTC         TTTTATATAGAAATT  95 39
 JR441_17220 3338329 .. 3338358 - -20.9  -4.56775   ATGCTCTTTTAAAAA       CAACCCCATCACC TGCT GGTGATGGGGTTG        TTTTATTGAATAGAC 100 28
 JR441_17205 3336057 .. 3336090 - -12.6  -5.07652   GTGCCGAAAACAAAA     GAAAGCAGCTCTCT AAAATA AGAGAGCTGCTTTT      TGCATCATGAGGTTA 100 30
       opuCA NONE
       opuCB NONE
       opuCC NONE
       opuCD 3331788 .. 3331807 -   -10    -5.055   CGAAGCCGTAAAAAA            CGCCCTGT CATT ACAAGGCG             TTTTTTCTTATGCGG 100 33
       opuBA NONE
       opuBB NONE
       opuBC NONE
       opuBD 3327483 .. 3327518 - -17.2  -3.68529   AGTTTACGATTTAAA    TAGAAAAAAGAGGCTGG ACT CCAGCCTCTTTTT-CTA    TTCTATGCAGCTGAT 100 28
 JR441_17130 3323963 .. 3323998 -   -12  -3.12606   TGACACATCATTCAA    TATAGAAAACGCTTGG ATCT CCTTGCGTTTTCTATA     TTTTATTGACTTTTG  87 28
        secG 3322778 .. 3322798 -  -5.4  -4.72486   CAGAAACGTGAAAAA            GGCCTGAC TTCAC ATCAGACC            TTATACAAACATTGC  75 42
 JR441_17115 NONE
         rnr 3319546 .. 3319573 - -10.7  -4.41348   TGTTTCCGAAAGAAA        GCAAATAGAGC GCTGCG GCCCTATTTGC         TGGTTGAGCTGCTAT  95 37
        smpB 3318935 .. 3318967 -  -8.6  -2.92175   CGTGAACACAGTATA     GCACAG-GCCTGATT TTCG AATCAAGCACTATGC      CTTTAGAAGCCTTTT  69 28
        ssrA 3318389 .. 3318420 -   -19  -4.30719   GGTTTGGAGAATAAA      TAAAGCAGAACCTC TTGA GAGGTTCTGCTTTA       TTGTCAGTATGTATG 100 36
 JR441_17095 3317434 .. 3317452 - -10.3  -5.48787   ACAATATATAAAAAA             CCTCTCC TGTTG GGAGAGG             TTTAAAAGACACTGC 100 27
 JR441_17090 NONE
 JR441_17085 NONE
 JR441_17080 3315960 .. 3315980 -  -6.9  -5.60993   TGCCCGATAAAAAAA            CAGAGAC TTATACC GTCTCTG            CTTGCATGACATCAG 100 63
 JR441_17075 3313904 .. 3313919 -  -4.8  -4.74787   ATAAAGACAAAGAAA              TTTACT TTCA AGTAAA               ATATCTCGAATTAAA  74 65
       azoRB 3313129 .. 3313161 - -12.1   -5.1861   TGGAGCACTAAAAAA      CAAAAGCCTCCCC AAATAAG GGGGAGGCTTTTT      CATTAGAATGTTTTT 100 28
        csoR 3311584 .. 3311594 -  -4.6  -2.79796   TTTTATCCTACCATA                 CCCC CGT AGGG                 TATTACAATAAAAAA  48 46
        copZ 3311298 .. 3311323 - -14.1  -4.71307   TAAAAATGAAAGAAA         TATCGCGCCTC CCTA AAGGCGCGATA          CCTTGAATCACTCAG 100 33
        copA 3308811 .. 3308837 -  -9.5  -4.86621   AGTGTCAATGAAAAA         CAAAAACCGGC ATATA GCCGGTTTTTC         ATTTTACTTTCTGCA 100 24
        cadA 3306480 .. 3306505 -  -9.8  -5.46698   TTTAAAATTAAAAAA         GAAGCGGATC GCAATT GATCCACTTC          TTTATTTTAACAAGA 100 88
        bdbD NONE
 JR441_17035 3305330 .. 3305350 - -11.1  -5.37593   TGCGAAATTAAAAAA            GCGCCCG GCATACG CGGGCGC            TTTTTTTGTTATTCA 100 34
 JR441_17030 3304527 .. 3304553 - -15.3  -4.46926   CAGGCTACCATAAAA         GAAACCTCTCC GTCAT GGAGAGGTTTC         TTTTATTTTACTGAC 100 33
        helD 3301094 .. 3301111 -  -9.9  -5.56264   TGTAAATAGAAAAAA             GAGAAGG ACTC CCTTCTC              TTCATTCAGCCATCT 100 27
 JR441_17015 3299141 .. 3299151 -  -6.8  -2.72012   AATCAGTATACATCA                 CGCT GAT AGCG                 TTTTTGCTGCTGCAT  57 2
        cysI 3297349 .. 3297373 - -15.1  -5.43487   AAATTATAGAAAAAA          GAGACAGGAAG CTA CTCCCTGTCTC          TCGTCTTTCTTTCTC 100 39
 JR441_17005 3295087 .. 3295106 - -11.4  -5.80817   CTTAATATAAAAAAA            GCTGGCGC TCTA ACGCCAGC             TTTTTTTCTGCATTT 100 39
        pgoN 3293492 .. 3293532 -  -6.9  -5.80817   TTCAACAGAAAAAAA  CGCACTAAAAAACTCCCCG TAA CGGGGAGTTTTTTGATTAA  AACAGAAGCTCATCA 100 22
 JR441_16980 3290994 .. 3291011 -  -9.9  -5.63103   TCCGAATGAAAAAAA             TCCCTCT ATCA AGAGGGA              TTTTTTACGTTTCCA 100 30
 JR441_16965 3288212 .. 3288238 - -13.8  -4.28375   GGAACAGATGGAAAA         TACGGATAGAGC CAA GCCCTATCCGCA         TGTGGTTATCGATTA 100 31
 JR441_16960 3286406 .. 3286428 - -12.1  -5.26316   TGATTTTATAAAAAA           GACACCTGA GCAAA TCAGGTGTC           TTTTCATTATGCTTG 100 32
 JR441_16950 NONE
 JR441_16945 3282968 .. 3282979 -    -3  -2.57132   TGTTCCGTTGATAAT                GAAT TCAT ATTC                 GGCCCCCTCCTCTAA  41 37
 JR441_16940 3282142 .. 3282160 -   -11  -6.09888   GCCGAATAAAAAAAA             TCCCGGCT TCA AACCGGGA             TTTTTTCATACAGTA 100 31
 JR441_16935 NONE
 JR441_16930 NONE
 JR441_16925 3278879 .. 3278903 -  -9.4  -5.47218   TCCCAGCTAAAAAAA         GAACGCATTCC AATT GGA-TGCGTTC          TTTTTATTCATAGCG 100 29
        sigO NONE
        rsoA 3275953 .. 3275970 -  -4.8  -5.36314   CAAAACAGCAAAAAA             GGAGCA AACAAG CGCTCC              CTTTTGATGTTTTTT  84 53
        yvrH NONE
        yvrG NONE
 JR441_16885 3272416 .. 3272436 - -12.6  -5.67063   TGTAGTATAAAAAAA            CGCATCCG TATTT CGGATGCG            TTTTTTTTATACGTC 100 32
 JR441_16875 NONE
 JR441_16870 NONE
 JR441_16865 NONE
 JR441_16860 3267274 .. 3267299 -    -9  -6.20267   TGAAAAACAAAAAAA         GCCGGCATAT ATTTGA ACACGCCGGC          TTTCCTTTTCACTTT 100 41
 JR441_16855 3265837 .. 3265857 - -12.6  -5.61596   ATTGGCACAAAAAAA            CGCCATGC ACGAG GCATGGCG            TTTTAAAACCCTTTA 100 38
        liaI NONE
 JR441_16845 3264576 .. 3264628 - -11.4  -2.52795   AAGCTTGCGAATTGA TACGTGCGGAA-GGGGAAGGACTTG ACCG CAAATCCTTCCCCGTTCCGCTTATT CATTTGCCGCTTGTG  80 21
 JR441_16840 NONE
        liaF NONE
        liaS NONE
        liaR 3261164 .. 3261176 -  -4.1  -2.88544   TGTGATTGTCAGAGA                CTTCG GAA CGAAA                GGCGCAAACAAATAG  46 48
 JR441_16805 NONE
        fumC 3255764 .. 3255790 - -19.6  -3.42583   GCAACATATTTAGAA         GAACGGCTGCTT AAA AAGCAGCCGTTC         TTTCTTCCTATTACG 100 36
        spxO 3254051 .. 3254061 -  -2.6  -5.61596   AGCTGGAGAAAAAAA                 TAAA GGA TTTA                 TTATATTTAACGAAG  89 518
        htrB 3250807 .. 3250829 -  -9.2  -5.46657   TAGGGTAACAAAAAA           GCTGAACC TTAATCG GGTTCAGC           TTTTTGTTTTTTCTT 100 39
 JR441_16760 3247445 .. 3247467 -  -7.6  -4.82333   AGAAGAATTGAAAAA           GCCGGAGCAT TTA ACGCCACGGC           TTTTTCTTTAAGATT  88 33
 JR441_16755 3246859 .. 3246873 -  -3.6  -2.90028   TGTAGCAGAAAACAC               TGACTT TGA AAATCA               TTTTCAATTAGTTTT  46 80
 JR441_16750 3245840 .. 3245876 - -14.7  -5.00616   TTCCTTTCGAAAAAA   CAGC-AAGGAGCTTTC TCAATT GAAAGCTCCTTCGCTG    CGTTATTTATCCATG 100 32
 JR441_16745 3245538 .. 3245563 -    -7  -5.37345   CTGAATCACAAAAAA         GCAGTCTGCTA TAATG TA-CAGACTGC         TTTTTGGCTATTGTT  95 33
 JR441_16735 NONE
 JR441_16730 3243359 .. 3243382 - -13.8  -2.77148   CCCATTAATAGAGCA          CCCCGCGGGT ATCA ATCCGCGGGG           TTTTTTATTCAATCA 100 30
 JR441_16705 3239487 .. 3239507 -  -8.2  -2.76171   TGGAACAATCATAAT            GCAGCTGC TTCCC GCGGCTGC            TTTCACTTTTTCAAA  66 28
 JR441_16695 NONE
 JR441_16690 NONE
        fadE 3233780 .. 3233801 - -11.6  -5.00616   GTGCTTCTTAAAAAA           GAGCTCCG CGCATT CGGAGCTC            TAGGCCAATCAGACA 100 34
 JR441_16680 NONE
        gcvH 3232837 .. 3232854 -  -2.7  -2.64155   GTTTGTCGAAAGCCA             TATTGGA CACC TCCCATA              ACGTTAGCGTGTCCA  41 64
 JR441_16670 3232578 .. 3232596 -   -11  -4.20817   CAGATTGTAAAAGAA             GGCAGTGA AAT TCACCGCC             AACATTAACACCAGC  90 30
 JR441_16665 NONE
 JR441_16660 3231810 .. 3231820 -    -4   -2.9652   TTATAAAACGAACGA                 CAAT TTC ATTG                 GATATGCTGAGAAAT  47 44
 JR441_16655 3231122 .. 3231149 - -14.2  -5.07652   TTCTGCAAAAGAAAA        GCCTTTCTGCAC ACTT GAGCAGAAAGGC         TTATATAAAATGCCT 100 264
 JR441_16650 NONE
        metP NONE
        metQ 3228456 .. 3228500 - -20.3  -4.12902   CAATCACGCTGAAAA GATGACAAAGCCCTAAAACGA ATA TCGTTTTAGGGCTTTGTCAAT AATTGAACCCCGGAA 100 62
 JR441_16635 3227821 .. 3227836 -    -4  -2.85668   TAGCGGCAGATGAGA              CGAAAG CATC CTTTCA               GAACAAATGAGAATG  46 63
 JR441_16630 3227506 .. 3227521 -  -6.8  -5.63236   ATTGAAAAAGAAAAA              GAGTGG ATTC CCACCC               TTTTTTAAAAGATTG  93 47
        sufC NONE
        sufD NONE
        sufS NONE
        sufU NONE
        sufB 3222060 .. 3222086 - -16.8  -5.26119   CTCTGAAAAATAAAA         GAAGACGAACTT CAA AAGTTCGTCTTC         TACAATCAAATTCGG 100 101
 JR441_16600 NONE
        glxB 3221078 .. 3221099 - -12.9  -5.31545   AAGAAGAGTAAAAAA           CCGCGGGCC CTGT GGCCAGCGG            TTTTTCTTAAGGACG 100 53
 JR441_16580 3219332 .. 3219342 -  -3.2  -5.24647   ATACAGAAAAGAAAA                 GCTA GAA CAGC                 TTTATTATATTTGTT  73 58
 JR441_16575 3218845 .. 3218869 - -10.8  -4.55128   ATGCCCAAATCAAAA          GCCAGAACTT GACTT AAGCTCTGGC          TTCGCTGTTCAATCC  95 54
        frlB 3217640 .. 3217667 -   -13  -2.62184   CTCCTCTGGACATTA        GACTATAATGTT ATAT AACATTATAGTC         TAATGCATAATGGTT  85 54
 JR441_16565 3216315 .. 3216340 -  -7.7  -4.82901   TCTCCTTTATAAAAA         GAAAAGGTG CGAAGCTT CACCTTTTC          TTTGATTTATTCAGC  88 32
 JR441_16560 NONE
 JR441_16555 NONE
        frlD 3213410 .. 3213425 -    -4  -3.15396   AACAGCAATACAAAG              TTGTAC CCAC GCACAA               TACGAAGCTATTAAA  48 237
        ugpC 3211572 .. 3211593 - -14.5  -5.06414   TGGCCGTAAGAAAAA           GGTGCTCCT TTTT AGGAGCACC            TTTTTCTAATACACA 100 31
        allC NONE
        pucG 3207726 .. 3207745 - -13.6  -4.61231   TCATATCGTTAAAAA            GCTTGCGG AGTT CCGCAAGC             TTTTCTTTACACCGC 100 32
 JR441_16515 NONE
        pucB NONE
        pucC NONE
        pucD NONE
        pucE 3202328 .. 3202349 - -14.5  -5.05782   ACTGAGGCTAAAAAA           GTCCGGCTT TTAA AAGCCGGAC            TCCCGTCTCCCTCCG 100 13
 JR441_16460 3193810 .. 3193831 - -14.4  -5.40004   GAGGAAATCAAAAAA           CCCGGCGG TAAAAT CCGCCGGG            CTTACGAAGGAACGA 100 27
 JR441_16455 NONE
 JR441_16450 3192513 .. 3192526 -  -2.3  -4.64861   CTTTTCTAAAATAAA               TCGAG CTGT CTCGG                AGCAAGTCCGCTGTA  61 2
 JR441_16445 NONE
 JR441_16440 3190200 .. 3190232 -  -2.1  -2.74012   TTACCACGTCAACCA     CTCCCTTCATTCAT CACTTT ATG-ATGAAGGGCA      CAGCTTGTTGTGGGC  40 49
 JR441_16435 3189819 .. 3189858 - -10.2  -4.63486   ATCTTGGCAAGAAAA  TCCCCCCTTACATATCACA ATG TATGCT-TGTAAGAGGGGA  CATAGTAATAGCCGG  91 53
        yunB 3189012 .. 3189059 -  -8.6  -5.63374   TGAATACCAAAAAAA GAAGTAACAAA-AAGCCGCCTCT TCG ACAGGCGGCTTATTTGCTGCTTT TTTCTTTTTTTGAAT 100 12
        lipA 3186876 .. 3186904 - -14.7  -2.82291   AATCGATAGGAATGA        CAAAAACGCCAGA TGA TCTGGCGTTTTGG        CATTATGCTTGTGCT 100 28
 JR441_16410 NONE
 JR441_16405 NONE
        nucF 3184587 .. 3184607 - -14.7  -3.92996   CGGCATACAGAATAA            GGGCACCCT TTT AGGGCGCCC            TTTTTTCAAATGTAT 100 31
       cotNH 3182822 .. 3182834 -  -4.8  -3.21276   CCTGTTTTGACAAGA                CAGC ATTAG GCTG                AATTTTGCGAATGTA  53 105
 JR441_16385 NONE
 JR441_16380 NONE
 JR441_16375 3179391 .. 3179417 -  -6.5  -5.52384   TCTCCAGCAAAAAAA        GCGC-CCTCTGC TGAC GCTGAGGAACGC         TTGGCATGATCTATA  93 36
 JR441_16370 3177313 .. 3177339 - -16.7  -3.10244   TCTTTTAATAAAGCA         GCCAGGCTGAT ATTTG ATCAGCCTGGC         TTTTTTTATTAGAGA 100 34
 JR441_16360 3176532 .. 3176550 - -10.3   -3.9467   AATGATAGAGAAGAA             CCGCTGA TCAAG TCAGCGG             TTTTCTGTATACCCA  88 19
 JR441_16350 3174930 .. 3174945 -  -8.2  -5.79595   CGGCAAAATAAAAAA              GGGCCC GTCC AGGCCC               TTTTCTTTAAAACAT 100 32
 JR441_16345 3173563 .. 3173596 - -17.7  -2.87132   CCCGTTTTTCATACA     TAAAAGCTCCTTGCA CTGA CGCAAGGAGCTTTTA      TCGTTTATATAAACA 100 30
 JR441_16340 NONE
 JR441_16335 3172116 .. 3172152 -   -11  -5.18726   TCCCCATAATAAAAA    CGCCTCCCTTAACGAT GATTT ATCGCTAAGAAAAGCG    TCAGTAATAGTTGCT 100 56
        paiA NONE
        paiB 3170615 .. 3170647 - -12.8  -5.71983   TTAATCATAAAAAAA     CGCCAAGTC-AGCGG TTCT CCGCTTGAGTTGGCG      TTTTCTGCTACTTCT 100 55
 JR441_16315 3169173 .. 3169199 -  -6.7  -6.01369   TAAATAATAAAAAAA        GAGAGCTTGTGTC TGC GACACA-GCTC-C        TTTTTTATTTGAAGA 100 30
 JR441_16305 3166597 .. 3166610 -  -9.5  -5.09762   TTTTAATAAAGAAAA               CCCGC TTCC GCGGG                TTTTTAGAAAAACTT 100 29
 JR441_16300 3166246 .. 3166295 -  -5.9  -2.65521   GGCAGACTAATCAAC CTATTCCACCCCCCTGCGTT GTTTTTAGTGT AACGC-GGGGGCTGAAATAA AGTCAACGGCTGGAA  54 28
 JR441_16295 3165900 .. 3165918 - -10.4  -5.66684   GAACGCATAAAAAAA             GCTTTCTT TAG AAGAAAGC             GGCATTTAAAACATT 100 31
        spsC 3165140 .. 3165161 - -11.5  -5.47218   TTTCATGTAAAAAAA           CGCTCCTGC TTTC GCTGGAGCG            TTTTATTCTTTCACA 100 28
 JR441_16280 3162966 .. 3162990 - -12.9   -5.4505   TTTCGGAAGAAAAAA          TCCCTGCCGCA TCA TACAGCAGGGA          TTTTTCATTACTCGT 100 33
 JR441_16275 3161495 .. 3161516 -   -13  -4.59069   ATCATAACGAGAAAA           GGCTCCCC AGTAAA GGGGAGCC            TTTTTCCTATAAAAC 100 32
 JR441_16265 3160064 .. 3160087 -  -5.4   -5.4505   TTCCCGAATAAAAAA          GGCACCTTGAT CAA AT-AAGGTACC          TGCAGACTATCAATA  88 92
        besA 3159058 .. 3159076 - -10.3  -3.27525   TTTTTTTAAAGGCAA             GGCTGAG TATGT CTCAGCC             CATTGAAAGATGCGG  79 20
 JR441_16255 NONE
        dhbC NONE
 JR441_16245 NONE
 JR441_16240 3154267 .. 3154279 -  -2.6   -3.0353   CCTTTTATAAATAAT                CCGC GTTTG GCAG                CACTTGCTGGCTGCG  43 2
        dhbF NONE
 JR441_16230 3146842 .. 3146862 - -11.2  -4.98436   GTAAGATTAGAAAAA            GAGACTGC GGCGA GCAGTCTC            TTTTTGATACGATTA 100 38
 JR441_16210 3142669 .. 3142706 -  -9.1  -2.88861   GATCACCCTTACATA   GAAAGAGCGCCGTCTTC TTTT GAATCAGGCGCTCCTTC    CCTTTCATACTGTTA  69 38
        yukD NONE
        essB 3140982 .. 3140992 -  -2.4  -2.85985   ATAATAGACTCAAAT                 GGCG AAC CCCC                 TTACGGTCGAATGGC  41 73
        essC NONE
        esaA 3133225 .. 3133261 -   -11  -3.16088   AGAGGGTATGAAAAG    GGAAAAGGAGAGCATA CAAAT CATGATCCCCTTTTCC    ATGCTGCGATCACGC  80 35
        essA 3132715 .. 3132728 -  -3.1  -4.08706   CGGTGATGATATAAA               GTTCC ATTG GAAAC                CTCCTTTTCCGTTAT  57 81
 JR441_16180 3131972 .. 3131990 -  -8.9  -5.60993   TTTTGTATAAAAAAA             GAGCAGA AAATA TCTGCTC             TACAAAAACTCTTTA 100 25
 JR441_16175 3131146 .. 3131157 -  -5.8  -2.97245   TTATGGATAATGACA                CAGG CTTA CCTG                 ATAAAACAAAGGGGT  56 131
 JR441_16170 3130808 .. 3130830 -  -2.7  -4.74103   CGCTTAACTGAAAAA          TAGGACGTCC CGGT GTACG-CCTA           TTTTTCATGCGCAAG  65 46
 JR441_16160 NONE
 JR441_16155 3128891 .. 3128919 - -13.3  -5.60689   TTATACAATAAAAAA        GCAACAGCCTCTT GTG AAAAGGCTGTTAC        CCGTTAAACGAAACT 100 22
 JR441_16150 NONE
 JR441_16145 3128104 .. 3128122 - -11.8   -5.1356   TGCCATGAACAAAAA             GACAAACG GTC CGTTTGTC             TCTTAAGATTTCAGC 100 28
 JR441_16140 NONE
 JR441_16135 3125947 .. 3125991 - -14.7  -3.17888   AAAATAATATATACA TAAAGAAAA-CTGGCCCTTC GCGAAT GAAAGGCCAGTTTTTCTTTA TTCTTCCTCAAGCTC 100 23
        pdeH 3124183 .. 3124206 -  -4.5   -4.7889   ACAAACACCGAAAAA          GACCGCAAC GCTAAA GTTGTGGCC           TTTTCGCTTTGTCAT  71 442
        degQ 3123657 .. 3123672 -  -7.6  -5.98781   TAGAACGAAAAAAAA              GACTTG TTTC CAAGTC               TTTTTCACGAAATTT 100 30
 JR441_16110 NONE
        comX 3122228 .. 3122239 -    -3  -2.58663   ATTCATCTGTATAAT                CTAA AACA TTAG                 TGACCTCTAACTTAC  41 192
        comA NONE
 JR441_16090 3118951 .. 3118976 -  -7.6  -3.31603   ATTTATAAAAATAAG         CAGCCGGA CAGGCAGAGT TCCGGCTG          TTTTTTTATTTCTTG  67 31
 JR441_16050 3112702 .. 3112724 -  -9.2  -4.40003   CTTCATAAACAGAAA           GAGTTCCG TTTTATG CGGAACTC           TTTTTTTATTTATTC  91 31
 JR441_16010 3102990 .. 3103017 - -17.2  -3.64682   CACCAAACGCTGAAA        TGGCTAGCTTAC ACAG GTAAGCTAGCCA         TTATGCTATTATAAA 100 6
        kapD 3097884 .. 3097897 -  -2.3  -4.58663   AGCAGCTTCCAAAAA               GGCAC TACG GTGAC                CATTAAGCTTCCCGC  61 515
 JR441_15970 3094977 .. 3095009 - -15.2  -3.16564   TGCTGATTTTATCAA      TTAAAAAAACCGGT GCTGA ACCGGTTTTTTTAA      GGCGTGCAGGAGCTG 100 22
 JR441_15960 NONE
 JR441_15955 3092271 .. 3092312 -  -3.7  -4.81551   TATGCACAGCAAAAA GGGGGTAAACTGAAAATACC AAA GGCTTTCT-AGTATTCCCCC CTTTTATTGGATGCG  69 63
        yugI 3091720 .. 3091743 - -13.2  -4.58773   TGCATGAAACCAAAA          GCACCGAACA TTCC TGTCCGGTGC           TTTTTTTCATGCTTA 100 38
 JR441_15940 3090016 .. 3090041 -  -9.7  -5.69262   TGACAAAAAGAAAAA         GGGAAGCAGCC AAAC GGCTATTTCCC          CTTTTTTTATAGAGA 100 32
 JR441_15935 3088742 .. 3088765 - -12.5   -4.4846   CAAGTCAAGAAGAAA          GGGCGGAAT GACTGG ATTCCGCCC           TTTGAGTTTATAGAG 100 33
 JR441_15930 3087276 .. 3087299 - -12.4  -4.85599   CTGATTTTATAAAAA          GCCGACCGGC AAAT GCCAGTCAGC           TTTCTCACATTAATC 100 35
 JR441_15925 NONE
 JR441_15920 3086349 .. 3086372 -  -3.1  -5.61596   AGGCGTACAAAAAAA          GGAGGGA CCGATGCTTT CCCCTCC           TCTTACATACAAGGT  95 68
 JR441_15905 NONE
 JR441_15900 3084036 .. 3084059 -  -9.6  -5.73672   AAATAAGCAAAAAAA          GCCCTTACCA TAAA TGGTAAGGGG           CCACCTCCTTAACGT 100 40
 JR441_15895 3082713 .. 3082733 -  -5.4  -5.39721   TGATGACACAAAAAA            CAGCCG TTCGTTCCC CGGCTG            TTTTTTATTAAAAAT  86 33
 JR441_15890 3080930 .. 3080948 -  -8.8  -6.09196   GTTAAAACAAAAAAA             CTCCAGTC TAA GGCTGGAG             TTTAGCACCATAGAT 100 27
 JR441_15880 3080349 .. 3080362 -  -3.1  -3.89346   CCTTCATTCGATAAA               GCCGCA GCG TG-GGC               GGGTGTGACAGGCCC  55 95
 JR441_15875 3079910 .. 3079940 -  -6.1  -4.56775   ATCGTCCGCTAAAAA       GCCCCATCGCC TATTTTCCG GACGATGGGGT       TTCAAATGCCTTTCG  76 5
        mcpB 3076993 .. 3077011 - -10.3  -5.74122   TACCATATAAAAAAA             CAGCGCT TTGAT AGCGCTG             TTTTTCGGTTTTTAC 100 37
        tlpA NONE
        mcpA 3072712 .. 3072736 - -12.9  -6.11019   AAAAACTAAAAAAAA          CACCCAAGCGT AAC AAGCTTGGGTG          TTAAGGCTTATTATT 100 36
        tlpB 3070613 .. 3070636 - -11.8   -5.4505   GCTTTTAACAAAAAA          GAAAGCAGCA GATA TGCCGCTTTC           TTGTTTCATTATGAT 100 34
 JR441_15845 NONE
        rhaR NONE
        rhaB NONE
        rhaM NONE
        rhaA 3064477 .. 3064504 -  -9.9  -5.47399   TCAAGCTTAAAAAAA       TCCGCCCGCGTGC AAAT GC-CGC-GGCGGA        TTTTTTATTAGGCAA 100 33
 JR441_15815 3062086 .. 3062098 -  -5.5  -3.48593   TATTTTTTTACATAA                CGGGA GCT TCCCA                TAAATGGAAAGCCCG  58 64
 JR441_15810 3061184 .. 3061205 -  -8.8  -5.38951   AATTGACAGAAAAAA           TAAGGCTC GTAAAA GAGCCTTA            TTTTCGACTTACATC 100 34
 JR441_15805 3061008 .. 3061024 -  -9.5  -6.09196   CTCAAAACAAAAAAA              CCCTTAT AGA ATAAGGG              TTTACAGGTATGGAG 100 34
 JR441_15795 3058349 .. 3058381 - -10.9  -4.23434   GAAAAGATTGCAAAA      TAAAAACCTTTTC GCTCAAT GAAAAGGTTTTTA      CCATGTTTCTATTTT  90 34
        lytG NONE
 JR441_15785 3056984 .. 3057003 - -10.7  -5.58454   GTGATATCAAAAAAA            TCCGGCG TGCAGT CGCCGGA             TTTTTTTATGATTCG 100 31
        betB NONE
        gbsB 3050384 .. 3050406 - -10.6  -5.06451   CATTATCCCAAAAAA           TCCCGCTC TGTAAAG GAGCGGGA           TTTTGATTATACAGT 100 32
 JR441_15750 3049721 .. 3049766 - -16.5  -4.28115   ATGAAAGAAATTAAA GAAAAGATAGAAAGGGCCTGAT TTA ATCAGACCCTTTCTG-CTTTTC GTTTGACTTTTCGCT 100 6
 JR441_15740 NONE
        floT NONE
 JR441_15730 3046440 .. 3046464 - -14.3    -3.965   GCGTAAAAGTAACAA          TCCCCCAGCGA ATT CCACTGGGGGA          TTTTTCGTTATCTGT 100 33
 JR441_15720 3043544 .. 3043569 - -11.3  -2.72371   GTTTTCAAAGAACAC         GTTTCGAAGGA ATGA TCCTTCAAAAC          TAAACAAGACAGGGA  78 91
 JR441_15715 3040487 .. 3040504 -  -8.5  -4.49556   TCGCCACCAAACAAA             TTGAGAG TGTT CTCTCAA              AACTAGATAACAGGT  86 58
         rrf NONE
 JR441_15705 NONE
 JR441_15700 3040145 .. 3040157 -  -3.5  -3.09648   CAAGAGACTTGAATA                TTATA TCA TATAA                AAGTGGTGCCGGCAA  45 29
 JR441_15695 NONE
 JR441_15690 3039936 .. 3039964 -  -4.5  -3.09516   TGTTCTACCACTGAA        CTACTTCCGCA GAAATGG TGCGGATGAAG        GGACTTGAACCCCCA  50 12
 JR441_15685 NONE
 JR441_15680 3039771 .. 3039781 -  -2.4  -3.36823   GGGCGCAAAACTTAA                 TGCC GAG GGCC                 GGACTTGAACCGGCA  45 15
 JR441_15675 NONE
 JR441_15670 NONE
 JR441_15665 NONE
 JR441_15660 NONE
 JR441_15655 NONE
 JR441_15650 NONE
 JR441_15645 NONE
 JR441_15640 NONE
 JR441_15635 NONE
 JR441_15630 3038861 .. 3038884 -  -2.4  -2.98493   TTTACCACTAAACTA          CACCCGCAATT TTT ATTTG-GGGCG          ATTGATGGGAATCGA  42 19
 JR441_15625 NONE
 JR441_15620 NONE
 JR441_15615 NONE
 JR441_15610 NONE
 JR441_15605 3038399 .. 3038417 -  -8.9  -6.14618   TAGAAAACAAAAAAA             CCTTGCA GGATA TGCAAGG             CTTCTGGATGACCCG 100 31
        glgB NONE
 JR441_15595 NONE
        glgD NONE
        glgA NONE
 JR441_15580 3030262 .. 3030278 -  -9.4   -5.7946   CTGTGAACAAAAAAA              GCCGCT TATAC AGCGGC              TTTTTCACATCATCG 100 30
       cotSA NONE
        cotS NONE
 JR441_15555 3025791 .. 3025812 -  -7.4  -5.36314   GAAAACATGAAAAAA           GGCATAAA TGTGAC TTTATGCC            TTGCGCTTTACGGTT  95 19
 JR441_15535 3021276 .. 3021292 -  -7.9  -3.06183   TCCACGCTGATTGAA              CCCCCGA TTA TTGGGGG              TTCTTTTCCGTTTTC  65 16
 JR441_15525 NONE
        menD NONE
        menH NONE
        menB 3015400 .. 3015426 -  -8.1  -5.10933   GTATTGAAAAGAAAA        CAGCTTG-GACC GCAA AGTCTCAAGCTG         TTGGTTTACTAGGTA 100 48
 JR441_15505 NONE
        menC 3012681 .. 3012700 - -10.7  -5.72616   ATTTACATAAAAAAA            CCGGCTG GGTCAG CAGCCGG             TCCAAACGAGAAGGG 100 111
        mntA NONE
        mntB NONE
        mntC NONE
        mntD 3008613 .. 3008639 -   -11  -4.50058   GATTTATAATTAAAA         GAAAGAGCTG CATCAGC CAGCTCTTTC         TTTTTGCATGTTGAG  95 11
 JR441_15460 3005505 .. 3005524 -  -4.2  -5.88565   GTCATAATAAAAAAA            GACAAACC CTCA GGCCTGCC             TTATTTCCCCATGTT  91 26
 JR441_15455 3004756 .. 3004776 -  -5.5  -2.57192   ATGGAATCGAAGCGA            TTAAAACAC ATG GCGCTTTAA            AAGGCGGATGGCTGA  50 117
 JR441_15445 3004005 .. 3004032 - -12.9  -5.26918   AGACGTCACAAAAAA        GACCTTTTTGC TTATGC GCAAAAAGGTC         CTTTCTATTTTAGCC 100 35
 JR441_15440 3003462 .. 3003480 -  -2.4  -3.42699   ATTGATCCACCACAA             GAAAATCA CTC TGATTCAC             ACAATCAATGATGAT  45 30
 JR441_15430 3002741 .. 3002768 - -16.4  -5.38839   GATACAAAAAGAAAA        GCCGGACGTCTT TTTT AAGACATCCGGC         CGTTCTATTTTTGAA 100 42
 JR441_15425 3002167 .. 3002181 -  -2.7  -3.53224   TACTTTTGCCGGAAA               GTGCG ACCGA CGCTC               TGGGCTTTATTATGA  48 59
        ytkD 3001510 .. 3001527 - -12.7  -5.39721   GGAGGACATAAAAAA             CCCGGCA TATA TGCCGGG              TTTTTTATTCAATCC 100 30
 JR441_15400 NONE
 JR441_15395 2997672 .. 2997695 - -15.4  -5.49579   GTATAAAAAACAAAA          GCCAAGAGCA ATTA TGCTCTTGGC           TTGTTTTAATTGACG 100 31
        metK 2994346 .. 2994366 - -11.2  -4.08285   GATAAAAAAGGGAAA            GCCGCTTA ACCAG TAAGCGGC            TATAAAATTATTCTC  89 33
        asnB 2992282 .. 2992326 -  -8.8   -5.0065   GATGGAGAAATAAAA GGATAACAACAAGGCTTTCGA CTAC TCGAAAGCCTTGTTGTC-TGT TACACAAAGATGACT 100 25
 JR441_15375 2990770 .. 2990798 - -12.6  -2.96216   TTCTATGAGCACACA        CAAAAAGAGCCC GCTGG GAGCTCTTTTTG        TCAGCTGATATTTCG  88 26
        ytpA NONE
        tbcS 2988079 .. 2988103 -  -7.2  -5.81412   GCCATCGAAAAAAAA          GCTCAGATCA GCAAA TGATTTGAGC          TTTTTTCTTTGAGTT 100 8
 JR441_15345 2986086 .. 2986107 - -14.5  -6.48081   TTTACAAAAAAAAAA           CGGACCCTT TTAA AAGGGTCCG            TTTTCCTACACATCA 100 31
 JR441_15340 NONE
 JR441_15335 NONE
 JR441_15330 NONE
        ytrC NONE
        ytrD NONE
 JR441_15315 NONE
        ytrF 2980496 .. 2980514 -   -16  -4.96848   TGTGCTATAGAAAAA             GCCGGCTG TCT CAGCCGGC             TCGTTCACATTATAG 100 35
        bceR NONE
        bceS 2978719 .. 2978742 -  -9.6  -5.55001   GAACAAAAAAGAAAA          GCATGTGACA TTTT CGTCACACGC           TTATGACATGTTCAA 100 18
        bceA NONE
        bceB 2975913 .. 2975931 - -13.2   -5.4182   AACGATAAACAAAAA             GCTCCAGA ATG TCTGGAGC             TTTTTCTGTTTCACA 100 36
 JR441_15280 2973544 .. 2973566 - -10.6  -4.68593   CCGATTATGTAAAAA           GATCCCGC TCATCCG GCGGGATC           TTTCAGATTGTTGAC  95 236
 JR441_15270 2971685 .. 2971713 -  -7.4  -6.02546   CCAAACTAAAAAAAA        CTCCCTCATCCC AAAAA GGGACGAGAGAC        TTTCGTTTTCCCGCG 100 327
        leuS 2969144 .. 2969163 - -10.8  -5.53991   GACTGATGAAAAAAA            TCCCCTTT TGGC AAAGGGGA             TTTTTTCTAGGCTTA 100 38
 JR441_15260 2968731 .. 2968752 - -10.2   -5.4659   GAATACAAATAAAAA           CTAGGGGA CTGCTC TCCCCTAG            TTTTTTGGTTTTGTT 100 22
 JR441_15230 2962169 .. 2962191 - -10.7  -5.43974   AAAAGGAAACAAAAA           GACCGTTTT CACAT AAAACGGTC           TTTTTCGATTTCTTT 100 47
        bioW 2961227 .. 2961239 -  -6.3  -3.72576   CTTTTTTCTATCAAA                TCATG AGT CATGA                TCTTCCTCCCACTCT  63 13
        bioA NONE
        bioF NONE
        bioD NONE
        bioB 2956988 .. 2957020 - -13.7  -4.56597   CTTTCTGTTCAAAAA      TAAAAGCAATCGACA TCA TACCGATTGCTTTTA      TTGATTCTTTCAGCT 100 35
        bioI NONE
 JR441_15195 2954915 .. 2954943 -    -9  -5.64321   ATAACAAAAGAAAAA        GAGCATAATCTT AGAAA ATGATTATGCTC        CGTTCTCCTCCTCGT 100 18
 JR441_15190 NONE
 JR441_15185 2952311 .. 2952335 -  -9.4  -5.12617   GAAGCATGTAAAAAA         CCCAAAACCGC TTGC GCG-TTTTGGG          TTTTTCCAATGTTAT 100 37
 JR441_15175 NONE
        rmgQ NONE
        rmgS NONE
 JR441_15160 NONE
 JR441_15155 2945152 .. 2945163 -  -4.4  -2.56596   TTCTCTATCAATCTA                TTCC GTTT GGAA                 CAGCCTTATGATAGA  47 51
 JR441_15150 2944910 .. 2944935 - -16.3   -5.5353   CATATTAACAAAAAA         GATCTTTCCGC GCCT GCGGAAAGATC          TTTTTATTTGCGATA 100 29
        murJ 2940035 .. 2940051 - -10.1  -4.77173   CCTTTATAAAAGAAA              GCCCGCA GCA TGCGAGC              CCTCAGTTTCATCAT 100 51
 JR441_15130 2939262 .. 2939282 - -12.6  -4.99043   TGCTTATAAATAAAA            CCCCGCAT TCGGT ATGCGGGG            TTTTTGTCATGCTTG 100 32
 JR441_15120 NONE
 JR441_15115 2936768 .. 2936787 - -12.2  -5.24989   GGATAGACCAAAAAA            CCCAAACG TCGC CGTTTGGG             TTTTTTATGTAAACA 100 30
        pepV 2933938 .. 2933963 - -13.3  -5.47821   ATTTATTTAAAAAAA         GGACTGGCTTC AGCA GAAGCCGGTCC          TTTTATTTTGCAAGC 100 28
        thpR NONE
 JR441_15090 NONE
 JR441_15085 NONE
        pulA 2928134 .. 2928173 -  -2.3  -5.98675   TATAAAAATAAAAAA  GACAGCTATTGA-GAG TCTCATATG CTAATCAATAGCCGTC  CTTTAAATTTTAGCG  87 58
 JR441_15075 2926854 .. 2926878 -  -3.5    -5.626   GAGCGCATAAAAAAA          GAGGGTCCC GTCTGCT GGAACACTC          CTTTCACATGTATAA  84 376
        trmB 2926079 .. 2926098 -  -8.6  -5.93809   GGCCCATAAAAAAAA            CAGACTCC TGTC AGAGTCTG             TCTTTACGTTCTCCA 100 29
 JR441_15060 2925174 .. 2925185 -    -3  -3.61922   AACATGCAGGGTAAA                CATA AAAA TATG                 CTATCGCTTCATTCG  48 26
 JR441_15055 2923369 .. 2923397 -  -9.6  -5.32944   CGGACAAGCAAAAAA       TAGAAGCCGCTGC CCAC GCAGCGGCT-CTT        TTTTATTATATCGCG 100 31
 JR441_15045 2921754 .. 2921789 -  -4.7  -5.68489   CAGAATAAGAAAAAA    GCTTGTCGATCCGGGC TTACT GCTCGT-TCAACAAGC    TTTTATGAAACCTAC  88 37
 JR441_15035 NONE
 JR441_15030 NONE
 JR441_15025 2919907 .. 2919921 -  -2.2  -2.59323   AAAAGCGTTCATAAG               TAAAAA TCC TTTCTA               ATCCTTTTTCGGACG  40 23
 JR441_15020 2919234 .. 2919257 - -13.2  -4.59944   ATCAGCAGAAACAAA          GCCGCTAAAC AAGG GCTTAGCGGC           TTTTCACATGATTCG 100 66
        sftA 2916109 .. 2916123 -  -3.4  -4.07568   CGCGGCGGCTGAAAA               GCCTCC CTT AGCGGC               GTATTTTATATGTTT  57 182
 JR441_15010 2914704 .. 2914731 - -14.4  -4.08706   TTTCCATCAGATAAA        TAAAAAGCAGTG AGAT CACTGCTTTTTA         TTATGCCATGACGTT 100 26
 JR441_15005 NONE
 JR441_15000 NONE
        ytxJ 2913285 .. 2913306 -  -9.5  -5.93809   TTTTTACAAAAAAAA           GCG-CCAGAT GAT ATCTGGACGC           TTTTTTCTATGACAA 100 32
 JR441_14990 2911970 .. 2911985 - -11.8  -5.75599   GAAAGCATAAAAAAA              GGCCGC AGGC GCGGCC               TTTTGGATTGTTCAA 100 41
        ccpA 2910679 .. 2910708 -  -5.8  -5.14563   CTCCCCATGAAAAAA       GCAAGAATTCACC ATAAA GGTGAAG-CTTGC       TCTTTGTTTTTCTTA  83 38
        motP NONE
        motB 2909116 .. 2909135 -  -6.4  -5.46129   GAACAAAGTAAAAAA            CGACCTTT ACGA AGAGGTCG             TTTTTGATTTTTTTA  93 12
        acsA 2904463 .. 2904488 - -15.5  -5.83211   GATTAAAATAAAAAA         CGCCCCTTCGT TTAC ACGAAGGGACG          ATTGATTATCGCGGT 100 307
 JR441_14950 2903126 .. 2903153 - -14.3  -5.27335   TGCGGTAAACAAAAA        GATCCTTTGCC TTCAGT GGCAAAGGATC         TTTTTCTTATTTATA 100 32
 JR441_14940 2900214 .. 2900238 - -10.1  -4.70583   CGCAGTAATATAAAA          GCCCAAAAC TGATATC GTTTTGGGC          TTTTTTTATTTTATT  91 31
        refZ 2898578 .. 2898589 -  -5.8  -3.37487   GCATACCTTCAAAGA                GCTG ATTT CAGC                 CTGCGGAAGCATTGA  56 401
        ezrA 2896192 .. 2896213 -   -13  -3.52192   GTTAATGTCACAGAA           CGCCTGCG TTATTG CGCAGGCG            TTTTGTAATGAAAAA  95 89
 JR441_14910 NONE
        thiI 2892229 .. 2892242 -  -5.3  -3.54475   CTTGTGAGTATAGAA               TGTGT CAAA ACACA                TGGCTTCATTCAGAA  58 78
 JR441_14900 2891946 .. 2891967 - -15.9  -4.86862   TGTAAAAAATGAAAA           GGAGTGGGG ATAC CCCCACTCC            TAAGCCATTATGTGA 100 50
 JR441_14895 NONE
 JR441_14890 2888588 .. 2888617 - -13.7  -4.52589   CTTTTTTATAGAAAA       TAAAAGGACCGGC TGCT GCCTGTCCTTTTA        CGATTTCTCATATAC 100 23
        sppA NONE
 JR441_14875 2886051 .. 2886076 - -11.9  -5.43866   CAATTCCTAAAAAAA         TAAACCCGGAC GGAG GTCCGGGTTTT          CGGTTATTTGCGGTA 100 29
 JR441_14870 NONE
        ytfJ 2884825 .. 2884849 -   -13  -5.78622   TTATGCCAAAAAAAA          GTTAACTGCG GCCAG CGCAGTTAAC          CTTTTTTTAATAATT 100 32
         tpx 2884210 .. 2884230 -    -9  -5.14563   CTTGCCATGAAAAAA           GCTCC-GGC GGCA GCCTGGAGC            TTTTTTCCCTGCTTA 100 38
 JR441_14855 NONE
 JR441_14850 2882916 .. 2882928 -  -2.7  -3.25073   CGGTGAATATCAACA                TCTTC TCC GAAAA                ATATCTGACTTTTCC  45 115
 JR441_14845 2881627 .. 2881646 - -10.8   -5.5112   TGCATCAACAAAAAA            GCACATTC AAGA GAATGTGC             TTTCATGCGATTTAT 100 37
 JR441_14840 2881019 .. 2881041 - -11.4  -5.93809   CTTTTATAAAAAAAA           CTTCACCTAA ATT TCAGGTGAAG           TTTCATAGTATTTAT 100 45
 JR441_14835 NONE
        argH 2878084 .. 2878101 -  -9.9  -5.71712   TGGCATACAAAAAAA             GCTGTCT GTAC AGACAGC              TTATTCTGCAGGAGA 100 222
 JR441_14825 NONE
 JR441_14820 2876427 .. 2876452 - -14.1  -5.75538   CTGAAAAAATAAAAA         CCACCTCCTGA TTCA TCAGGAGATGG          TTTCACGGTTTAAAG 100 35
        snaA 2874799 .. 2874812 -  -3.7  -2.62184   GGCTGCCTCACATCA               TGCCC AGCT GGGCG                CACCTAAAAGCGTTG  45 9
        tcyJ NONE
        tcyK NONE
        tcyL NONE
        tcyM NONE
        tcyN NONE
 JR441_14780 NONE
 JR441_14775 NONE
 JR441_14770 NONE
        ribR NONE
        sndA 2866238 .. 2866250 -    -2  -2.64225   GCAAAAACGATTAAT                TTCT TCATC AGAA                CACCCCATCTATATC  40 39
 JR441_14755 2865253 .. 2865269 -    -8  -5.79595   CTGGAAAATAAAAAA              GAAGCC CGACC GGCTTC              TACAGCGTTGATTTC 100 99
 JR441_14750 2863605 .. 2863616 -  -5.8  -3.57263   AGGCGTACGGGCAAA                GCCA TCTT TGGC                 AAAAGAAATATGTTC  59 258
 JR441_14740 2862439 .. 2862461 -  -8.5  -3.41309   ACAGATGAACACTAA          GAG-AGAGGG TCTC CCCTCTACTC           GTGTTCTTTACATAA  70 20
        dnaE NONE
        maeB 2856398 .. 2856425 - -14.9  -3.36671   AGTTTAACTTGAGAA        CAGCGCGTCGG TCTCCG CCAACGCGCTG         CCATTTTTGGAATAA 100 48
        accD NONE
        accA 2854250 .. 2854277 - -12.2  -5.27923   GAATGTCACAAAAAA        TAAACGTG-AGCC AAA GGCTTCACGTTTA        TTTAGTTTACCCCGA 100 27
        pfkA NONE
         pyk 2851304 .. 2851321 - -11.3  -4.85822   ATGATAAAGAGAAAA             GGAAGGG ATTC CCCTTCC              GTTTTCACCTGTAAT 100 40
        fxsA 2850825 .. 2850860 - -10.5   -4.7254   ACCGTTCAGCAAAAA    TAAAACGGCAGCCGT TTTTTC ATGGCTGCCGTTTTT     TATTTGATGATGATC 100 25
 JR441_14680 2849129 .. 2849144 -  -7.5  -6.02914   TGCATACAAAAAAAA              GCGGC TTTAAG GCCGC               TTTTTTTTATGAAGT 100 32
        citZ 2847572 .. 2847603 -  -3.3  -4.45083   TTCATATTTAGAAAA      CATTTTATTTTTCT TATAT AGA-AAACAAAATG      ATTTTTCCCAACATT  62 120
         icd NONE
         mdh 2845242 .. 2845271 -    -8  -4.81551   CATTTATAGTAAAAA       GAGAAAGGCT GTATTAAGCA AGCCTTTCTC        TCTTTTTATTAGGAT  88 34
        phoP NONE
        phoR 2842494 .. 2842520 -  -5.9  -5.48787   AGAAGACACAAAAAA        GGACGGGAAC ACAAATAG GTTCCCG-CC         GTCAAAATTGGCTCC  91 119
        polA NONE
        mutM NONE
        ytaF NONE
 JR441_14635 2837437 .. 2837457 - -14.1  -5.81032   TAATGGCAAAAAAAA            CACCGTTCA ATA TGAACGGTG            TTTTTTGAATTATGC 100 35
 JR441_14620 2834773 .. 2834797 - -14.3  -4.99435   CGTAAGAACCAAAAA          GCAGCCAGCGC TCC GCACTGACTGC          CCTCATGCTTTATGA 100 35
 JR441_14615 NONE
 JR441_14610 2832894 .. 2832939 - -13.5  -5.35224   TTTATAAAAATAAAA GGAGCATAAGCTAAAAAGCTCA TAA TG-GCTTTCTAGCTTCAGCTCC CTTTGTGTTCGCAAT 100 46
        nrdR 2832202 .. 2832225 -  -6.8  -4.50976   TTGCACATGAGAAAA          GAGCTA-GAAG AAT CCTCTTAGCTC          TTTTAACGCTCTTTC  76 28
        dnaB NONE
        dnaI NONE
 JR441_14590 NONE
        ytxC 2827769 .. 2827794 - -11.1  -4.96848   TTTTGCATATAAAAA         CCCCGCCCCCT ATGA AAGGGACGAGG          TTGAATAAACGGAAT 100 364
        thrS 2825772 .. 2825797 -   -12  -5.76237   TAGAGAAATAAAAAA         GCATGATCTC TTCAAT GAGATCATGC          TTTTTTATTTTATTT 100 35
        lytS NONE
        lytT 2822326 .. 2822349 -  -5.3  -4.81249   GCTGAAATGCAAAAA          GCCGC-CCAT CAAAT ATGGAGCAGC          TTTTTCAATTCCTTC  75 10
        lrgA NONE
        lrgB 2821022 .. 2821042 - -12.6  -6.14618   CATAAAATAAAAAAA            GCCAAGGC ATTCA GCCTTGGC            TTATCCTCCGATCAG 100 26
        infC NONE
        rpmI NONE
        rplT 2818748 .. 2818768 - -12.6  -5.03994   CTTTATATAGAAAAA            GCCGCTCT GCTGG AGAGCGGC            TCTATATGATTACTT 100 35
 JR441_14530 2818422 .. 2818448 - -13.8   -5.4477   AAACTCGCAAAAAAA         GCAGAAGAGCGT TAA ACGCTTTTCTGC         TTTTTATAAATCAAA 100 29
 JR441_14520 2816739 .. 2816766 - -12.8  -5.76633   GTACAGACAAAAAAA        TAGAATCCGCCT CAAT AGGCGGATTCTT         CCGTATCTTTATTGG 100 34
        abnA 2815579 .. 2815597 -  -8.8  -5.40072   TTTCTTTTAAAAAAA             GCCGGG GGCAGAG CCCGGC             TTTTTGATTCAATAG 100 34
        araA NONE
        araB NONE
        araD NONE
        araL NONE
        egsA 2809570 .. 2809583 -  -3.1  -2.91264   CGGGCTATTCATATA               GACCA TGGT TGATC                AGCGTTTTGTTTTCA  44 1
 JR441_14485 NONE
 JR441_14480 NONE
        araQ NONE
        abfA 2804846 .. 2804865 - -13.6  -3.82946   GCAGTTGAAAGACAA            GCCGGAGA TTTC TCTCCGGC             TTTGCTTATTCTTAT 100 37
        cstA NONE
 JR441_14460 2802478 .. 2802502 -   -13  -4.02456   AAACATCATGAGAAA          GCCCAAAACA GATAT TGTTTTGGGC          TTTTGTGCGTTATTC  95 35
 JR441_14435 2797075 .. 2797098 - -13.2  -6.34616   GGAAAATAAAAAAAA          CCCGTCCCTT GTAC AAGGGACGAG           TTGTGGCCGCGGTAC 100 299
        pheS NONE
 JR441_14420 2793524 .. 2793545 - -13.1  -5.36441   CGTTCATAGAAAAAA           GCTTGCAGA TTTC TCTGCAAGC            TTTTTTATCAGCCTC 100 33
        zapA NONE
 JR441_14405 2791624 .. 2791642 -  -5.3  -5.45726   CATACTTGAAAAAAA             CTTCTCC GGACA AGAGAAG             TTTTTTTATGCCCCG  88 31
        polX NONE
 JR441_14395 NONE
 JR441_14390 2786941 .. 2786968 - -10.1  -5.78622   GGACGGCAAAAAAAA        GAAAAAGAAAG GTAAAT CTTTCTTTTTC         TCATAATATGAACAG 100 122
        lcfA 2785115 .. 2785132 -  -7.1  -4.03234   TCCTTCCTATAGAAA             TGAATGA CTAT TCATTCA              TAATTTCATGATAAG  73 87
        fadR NONE
 JR441_14375 NONE
        etfB NONE
        etfA 2781884 .. 2781906 - -12.8  -5.34055   ATAAATATGAAAAAA           TCCCGAACTT TTA AAGTCCGGGA           TTTCCTTTATGAGTG 100 32
        abfB 2780173 .. 2780199 - -12.3   -4.7416   TTAAAACCTGAAAAA         GAGCGCCGG CATGAAGCT CCGGCGCTC         TTGCGCGATTAAGAA 100 34
        trxA 2779526 .. 2779547 -    -8   -5.7946   TGGCGAATAAAAAAA           GCGATCCC TCAATC GGAATCGC            TCTGGCATGTAAGCA 100 49
        uvrC 2777363 .. 2777387 -   -13  -5.88565   TCCACAATAAAAAAA          GCAATGAGAG GAATA CTCTCATTGC          TTATCAATTAATCAT 100 301
 JR441_14345 2776031 .. 2776053 -  -9.9  -4.87291   CAGTGTAATCAAAAA          GGCGGTGACT GCAT AGTC-CCGCC           TTTTTGATTGTCATT 100 39
        sdhC 2774686 .. 2774696 -  -3.2  -3.25202   TACTCTTAAACAAAT                 GCAA AAA TCGC                 TTTTAAGCCTACGTA  47 5
        sdhA NONE
        sdhB 2772088 .. 2772107 -   -10  -5.41143   TATTGTTTAAAAAAA            CCTCTCCC ATGC GGAAGAGG             TTTTTTCTTCTTATA 100 36
 JR441_14320 2771604 .. 2771618 -  -2.9  -3.31263   AGGTGACGTTTACAA               GATAA TTAGT TTATC               GTGTATGAAGAAGCG  46 21
        gerE 2771106 .. 2771118 -  -4.1  -4.63218   CTTTTTTGAAGAAAA                TGCAA GAC TCGCA                GGAGAGAAATAGAGG  66 181
 JR441_14310 NONE
        racE 2769738 .. 2769758 - -13.3   -5.9362   CAAAACAGAAAAAAA            CCCGCAACA TAC CGTTGCGGG            GAAAACTATCTTCTA 100 31
        gerM 2768493 .. 2768523 -    -7   -4.2528   CCGGAATTGAATAAA      GAAAGAGG-CAGC CGGAAC GCTAACCTCTTTC       TTTCTAGTATATCAA  75 51
 JR441_14295 NONE
 JR441_14290 NONE
 JR441_14285 2766526 .. 2766565 -  -3.6  -2.57211   ACGGTTTTTTAGAAT  TTTTTTCATGAGGAAGAA AATT TTCTTCCTCATGACATTT   TCATAGTGTGACTCG  45 26
 JR441_14280 2766323 .. 2766347 -   -13  -5.56673   ACCGACAACAAAAAA          CCTCAAATCC TAAAT GGATTTGAGG          TTTTTCTTTTGGTAC 100 39
        ilvB NONE
        ilvN NONE
        ilvC NONE
 JR441_14245 NONE
        leuB 2757552 .. 2757572 -  -8.3   -3.1355   TCTACCTAGAGCTAA            GACCGCTTA ACG TAAGCTGTC            ACACATTAGAAATTG  69 24
        leuC NONE
        leuD 2755464 .. 2755486 -  -7.6  -5.48825   CACCAGGCAAAAAAA           GCCGCCGG ACAAATA CCGGCCGC           TTTTTCAGTCTTGAA 100 30
        ddcA 2754327 .. 2754337 -  -2.6  -2.89079   AATACAACCACTATA                 TTAT AAC ATAA                 CACATAGCGCTTTCA  42 56
 JR441_14220 2752812 .. 2752836 - -12.9  -4.43859   CATAATTGTACAAAA          CAAGGCACGAA TGA TTCGCGCCCTG          TTTTATTAGTACTAT 100 55
        clpX 2751293 .. 2751318 - -17.7  -5.47218   TTGCATGCAAAAAAA         CCTCCTGAGTG TTAC CACTCAGGAGG          TTTGTGCTTATCTTT 100 39
        lonB 2749502 .. 2749520 -  -7.5  -5.52384   CCTTCATGAAAAAAA             CCCTATT ATCAA AATAGGG             TTTAAACGGATTCTT 100 27
         lon NONE
 JR441_14200 2746418 .. 2746439 - -14.5  -5.03227   ATACGATAAATAAAA           CCGGTAGAG GATT CTCTACCGG            TTTATCATTTTTTTG 100 19
 JR441_14190 NONE
 JR441_14185 NONE
        hemC NONE
 JR441_14175 NONE
        hemB NONE
        hemL 2739397 .. 2739422 - -10.5  -5.20216   GAGAGCACGAAAAAA         CCGGCA-CAAGG AGT CCTTGATACCGG         TTTTCACTCTTATCT 100 35
      spoVID NONE
        cotN 2736503 .. 2736531 -  -8.8  -4.63044   ATGGATATAAACAAA        CAAGTCCGCGCC ATTAA GACGTGGACTCG        TTTTCAGCCTGAAAT  90 10
        valS 2733183 .. 2733204 - -14.5   -3.7511   TCTTTTATAAGACAA           GGCGGTTTC TCTA GAAACCGCC            CCGGCTTTTCATTAA 100 37
 JR441_14140 2731823 .. 2731850 - -11.4  -5.76633   TTACACATAAAAAAA        CGGCAGAATC TTTTTTTT GATTCTGCCG         GAGCCGGATACTTTT 100 39
 JR441_14135 2730925 .. 2730949 -  -4.3  -5.96894   AGGCAAAGAAAAAAA          GAACAAGAC TTTTGTC GCCTTGTCC          AAAAAACGTTCGTCA  95 54
      spoIIB NONE
         maf NONE
        radC 2728332 .. 2728345 -  -2.3  -4.98531   TTCTTAAAGCAAAAA               TACCC TAAA GGGAA                AAACTCATAAACTCT  66 72
        mreB NONE
        mreC 2726368 .. 2726399 -  -4.4   -4.0251   AGCATCATAACGAAA      GGGAGAAGGAAACGT TTC ACGAT-CCTTCCTCC      TCTGTATCGACAGTC  61 10
        mreD 2725858 .. 2725871 -  -2.5  -4.34482   TTCGTCAAAAAAAGA               TAAAA TCCT TTTTA                CTCATCTCTCAATTC  57 23
        minC NONE
        minD 2724279 .. 2724304 -  -8.3  -6.20267   GCAAAAACAAAAAAA         CCTGACACAGC ATAT GCTTTGTCAGA          TTCTTCTCTTTGATT 100 49
     spoIVFA NONE
     spoIVFB NONE
        rplU NONE
 JR441_14075 NONE
        rpmA 2721399 .. 2721420 -  -8.7  -5.79526   ATATTGCAAAAAAAA           CTCCAGTCA TCAT CGACCGGAG            TTTTTTGAATCATTA 100 38
       spo0B NONE
        obgE 2719175 .. 2719196 - -14.5  -3.63744   CCCCCCTTTAAAATA           GAGAGCCTG GCAC CAGGCTCTC            TTTTCAGCCAACATT 100 43
        thrR NONE
        pheA 2717818 .. 2717831 -  -8.1  -5.66989   TAAAGACTAAAAAAA               GCCCT CTAG AGGGC                TTTTTTATAATTGGT 100 30
        nadB NONE
        nadC NONE
        nadA 2712501 .. 2712522 -  -2.4  -3.75653   AAGGAAGGGAAAATA           TTTCTGATC TACGT GATC-GAAA           GCATTCGATTCAGGG  49 12
        safA 2711203 .. 2711222 - -10.8  -6.09196   TTGAAAACAAAAAAA            GGAACGAT TTAC ATCGTTCC             GAACGATCACTCATT 100 32
        sgpA 2710450 .. 2710476 - -11.6  -5.30616   TGATGCAAAGAAAAA         GGCTGCCGAA TATCACT TCCGGCAGCC         CTTCCTTCCTAGCGG 100 34
 JR441_14005 2709631 .. 2709655 -  -8.5  -4.43213   CTGAACATACTAAAA          CCGGCCCGA TATGACC TCGTGCCGG          TTTTTTATGAACGAT  86 30
 JR441_13985 2707164 .. 2707185 - -17.3  -4.98531   TTCTTAAATCAAAAA           GGCAGCCGC ACAA GCGGCTGCC            TTTATCATGTATTTT 100 41
        iolG NONE
 JR441_13970 2703865 .. 2703879 -  -2.1  -3.45324   TAGTTTGACCAAAGA               GGCTA CTGCT TAACC               GTTTTATCAAAATTT  45 13
        bofC 2703276 .. 2703291 -  -7.6  -5.52384   CTTTCACGAAAAAAA              GACATG AATA CATGTC               TTCAATCAGCGGACG 100 41
        ruvA 2702541 .. 2702560 -  -2.8  -2.63596   CTTCACTTGAGACGA            GCCGTTCA TCCA TGAACATC             ACCTTACTTTAATAG  41 29
        ruvB NONE
 JR441_13950 NONE
        queA NONE
         tgt NONE
        yajC 2698771 .. 2698792 -   -13  -5.36441   CTTCCACATAAAAAA           GAGCGGGC TCACTT GCCCGCTC            TTTTTTGTTTGCTAT 100 56
 JR441_13925 2697277 .. 2697293 -  -2.2  -3.93369   GCAACCGTAAGCAAA              GTGCTG CCGAT CAGCAT              CAAAATCAAGGAGTA  53 255
        comN 2695548 .. 2695562 -  -6.4  -2.60075   CCTGTGCGAATCAAC               CTGCTA TCT CAGCAG               TTCTTCCAATGCTTC  57 14
       secDF 2693266 .. 2693291 - -15.5  -5.12707   TGAAACTTCAAAAAA         CAGGCTGCCCT GCAG AGGACAGCCTG          ATATTTTTTATTGCG 100 33
 JR441_13905 2692630 .. 2692650 -  -9.8  -2.60615   ACTGGTTTTAAACAT            GGCTTAAC ACTAG GTTAAGCC            CCCTTCGCTGTTAAT  74 19
 JR441_13900 2692186 .. 2692224 - -10.4  -2.76227   GCTAACATAAATTCA  CCCCTCAACC-ACCCTA TTATAC TAGAGCAGGCTGAGGGG   TTTCAAATAATATTC  77 46
        recJ NONE
 JR441_13890 2689260 .. 2689278 -  -3.8  -5.31545   AACAATAGGAAAAAA             GCACCC TGACATG GAGTGC             TTTTTCGTTATGCGG  78 47
        relA NONE
         dtd 2686440 .. 2686484 -   -14  -2.77876   GGATTAGAGAAATAC TTC-CAATAAAAAAAGCTGCC TTTT GGCAGCTTTTTTTATTTTGAA TCCATAATGAGCGTG 100 16
 JR441_13870 2684274 .. 2684310 - -18.2  -5.79588   TGAAAATGAAAAAAA    CTCCCGCCCCTACTAT ACATG ATAGTAGGGACGAGAG    TTATACCCGTGGTGC 100 304
 JR441_13865 NONE
        aspS 2681109 .. 2681130 -  -5.3  -2.99834   AAATCATATCACAGA           CGATT-TTGA TTT TCAAGAATCG           AACTGCACATTCAGT  53 36
        ssrS 2680848 .. 2680866 -  -8.8   -3.2511   TTTCATCTATAAAAT             GGCTGATC CAT GAGCAGCC             GTTTTTTCTGCGCAC  71 47
 JR441_13850 2680010 .. 2680030 - -14.1  -5.70761   AAAATAAAACAAAAA            CAGCCTTGA TCA TCAAGGCTG            TTTTTATGCATTATT 100 36
        cymR NONE
 JR441_13835 NONE
        mnmA 2675783 .. 2675801 -  -6.7  -5.14563   CCTTTCATTAAAAAA             CCCCAAC TCAGT GTTGAGG             TTTTTCATCTTTTAT  86 37
 JR441_13825 NONE
 JR441_13820 2672664 .. 2672681 -  -9.1  -5.72207   TGCAAATGAAAAAAA             CTCCCGC TTTC ACGGGAG              CATTTTATTGCTGTT 100 30
 JR441_13815 NONE
 JR441_13810 NONE
 JR441_13805 2671719 .. 2671740 - -11.7  -4.74013   GGCAAACATAGAAAA           GGATACTCT TTGG AGAGTATCC            TTTTTGCATTAAAAC 100 34
 JR441_13780 2667262 .. 2667304 - -12.9  -5.22312   AGTGACAGCAAAAAA GCCCTC-CCCCTATGCAAAC CAAC GTTTACACAGGGACGAGAGC TGTCTCGCGGTACCA 100 262
        alaS 2664583 .. 2664593 -  -3.2   -3.3217   GGCGAATTATAAAAC                 GGAT TTC ACCC                 AATCTTCTACAGAAG  48 6
 JR441_13770 NONE
        ruvX NONE
 JR441_13760 2663459 .. 2663480 -   -13  -5.43621   ATAAAGCAGAAAAAA           GCCGGAGC AGTATA GCTCCGGC            TTTGATTTTGCGCGA 100 45
        mltG 2662266 .. 2662284 - -10.3  -4.75309   GGAAAGCGAACAAAA             GGAGAGC TTTTT GCTCTCC             TTTTATTTCTCATTT 100 28
 JR441_13750 NONE
 JR441_13745 NONE
 JR441_13740 NONE
         udk 2658546 .. 2658569 -  -9.7  -3.83324   TTATAAACAGGGAAA          GAAGGGAAT TCGCAC ATTCCCTTC           CTGCCTATACATAAT  85 74
        greA 2657848 .. 2657874 - -15.2  -5.61596   ATCTTCATAAAAAAA         CACCTCACCCAC ATT GTGGACGAGGTG         TTTCGCTGCTAAACA 100 45
 JR441_13725 NONE
 JR441_13720 2655286 .. 2655318 - -19.3  -4.19506   AGCTGAAGCCTAAAA      CAAAAGCAGCCGGTT GTA ACCCGGCTGCTTTTG      TTTATTTTAGCTTTT 100 27
 JR441_13710 NONE
        mtnN 2653507 .. 2653527 -  -7.6  -4.96848   GTTTTTAGAGAAAAA           CGGAGGAGA ACGT TCTCC-CCG            TTTTAATGAATTCGT  89 28
 JR441_13700 NONE
 JR441_13695 2651361 .. 2651375 -  -2.8  -3.29541   ACGACTATTATAATA               TAATCC GGC GGCTTA               CAGAGAAAGTAATTC  46 51
 JR441_13690 2651060 .. 2651082 -  -9.2  -5.25799   AAAATAACAGAAAAA           CAGCCATC GCTTGAT GATGGCTG           TTTTTTTATTCGTCG 100 31
 JR441_13675 2646723 .. 2646769 - -11.1  -5.52096   AAAGGCAATAAAAAA GGCAGCACTCAAATAACCTGTGT CAA AC-CAGGCG-TTTGAATGCTGCC TAACTTGTATGCATA 100 180
 JR441_13670 2645550 .. 2645590 -  -9.8  -5.27335   GCGGGCAAATAAAAA CCGCAGACAAAAGAAGACA CCAA TGCCT-CTACTGCCTGCGG  GGAGTTGCGTATGTC 100 297
 JR441_13665 NONE
 JR441_13660 2644978 .. 2645000 - -13.6  -5.40072   TTTTCCGCAAAAAAA           GCAGAAAACA TAA TGTTTTCTGC           CCTCTTTCTAATGCC 100 33
 JR441_13655 2644217 .. 2644269 -  -2.3  -6.04324   GCAAAAAATAAAAAA TTAAGAAAATATACCCAA-ATCCT AATGCG AGGATCTTGGATATATTTCCCGAG AAATTTTTTATTTAA  87 33
        fatR NONE
        cypB 2640257 .. 2640279 - -16.4  -3.55866   TCATATGCAAAGCAA           TCCCGCCAAT CAG ATTGGCGGGA           TTTTATATTTTACAT 100 35
 JR441_13615 2634364 .. 2634388 - -10.1  -6.23545   GTGAAATAAAAAAAA          GACAAGGGA TACTCAC TCCCTTGTC          TTTTTATATGTGTCA 100 90
        levR 2629380 .. 2629420 -   -13  -5.79588   TTAAAACGAAAAAAA TAAACCTGTATTAAAATGG TGTT CCATTT-AATACAGGTTCA  TATGAAAAAACTGTT 100 42
 JR441_13595 NONE
        levE NONE
        levF NONE
        levG 2626534 .. 2626544 -  -3.2  -3.09749   CACTTTCAAGAGAGA                 CTGC TGC GCAA                 GCTGGTCCGTTTCTG  45 125
        sacC 2624419 .. 2624443 - -11.5  -3.79451   AAAATAAAACGAGAA          GGCACAGAC TGTTCAG GTCTGTGCC          TTTTTTAACATTAAG  91 36
        adhR 2621733 .. 2621766 -  -9.7  -4.42386   TCTTGATGGAGAAAA     CAGGCCAGAAACAAA ATCC TTCGTTTTTGACCTG      CCCTCTTCACACGCA  91 48
 JR441_13525 2618424 .. 2618468 -  -4.3  -4.90266   TTCACCAATCAAAAA CGGACACCAAACAAATCAGC GCAAAT GCTG-CAAGTTCAGTGTCCG CAACCTATTATGACT  74 115
 JR441_13520 2618290 .. 2618302 -  -2.7  -2.71731   TCCAGTCGGTAATCA                CGATT GAC AATCA                GGAAAAAAGACATGG  41 42
 JR441_13515 NONE
 JR441_13510 2617201 .. 2617227 - -12.4   -4.7373   TCATCGCAGCAAAAA         CCATACCAACTA TTG TTGTTGGTATGG         TTCGTCCTAGATAGG 100 77
         csn 2614339 .. 2614359 - -11.3  -5.28942   TACTGCAAATAAAAA            GATACCAAT ATC ATTGGTATC            TTTTAGATTGAGTTC 100 69
 JR441_13485 2611942 .. 2611954 -  -2.7   -3.1505   ATGACTTTTGATTAA                CATAT CTT ATACG                GTGTAATAAGTTAAA  45 85
 JR441_13480 2610374 .. 2610398 -    -8  -4.30177   TATCATATTAAGAAA         GACAAGAG-CA TGTT TGTCTCTTGTC          TTTTCCACATCGTGC  78 210
        sigZ 2608639 .. 2608669 -  -9.2  -3.62275   ATGGACTATTTTAAA       GGAATAACTGAC TTTGTTC ATCAGTTATTCC       TTTAAAATACGAAAG  78 19
 JR441_13465 2607771 .. 2607781 -    -4  -2.83345   TTCATAGAGTAATCA                 TCAT TTA ATGA                 GCCATCATCTCATGG  46 19
 JR441_13460 2607500 .. 2607529 - -14.5   -5.4492   TAGACATATAAAAAA       CCGCAAAGCTTTCT TGA AGA-AGCTTTGCGG       TCTTTGGGTCTCTTC 100 47
        aadK 2601859 .. 2601869 -    -4  -4.40561   TTTCGTTAAAAAGAA                 CAAA AAT TTTG                 GACAAGAATAATCAT  63 163
 JR441_13430 2601200 .. 2601236 -  -2.5   -5.9003   AAACGAACAAAAAAA    GAACATGTTTTGA AAAAAGATAGA TCAAAACATCTTC    TTATATGTTGTCATA  85 67
 JR441_13420 2600065 .. 2600083 -    -6  -5.02439   AGAGAATGATAAAAA             GCACTC TAATAAC GAGTGC             CGAAATGAAAAACTA  80 38
 JR441_13415 2599245 .. 2599268 - -14.6  -3.98173   GGAAATCGAATTAAA          GCGCCCTTCC TATC GGAAAGGCGC           CTGCCGCTTACTGTG 100 56
 JR441_13410 2598665 .. 2598685 -  -3.3  -3.29421   TTAAATATAAAATCA            GGACGATTT GTA AAATGATCC            ATTGAGATCAGTATT  48 2
 JR441_13405 2597197 .. 2597221 -  -4.3  -5.88476   AAAACAAATAAAAAA          CACCGATAG GATGAAA CTATTGGTG          TTTGCAAGACATCTT  91 182
        azlB NONE
        azlC NONE
        azlD NONE
        brnQ NONE
 JR441_13375 2593144 .. 2593166 -  -6.3  -5.24989   GTATAGAGCAAAAAA           GCAAACTTC GGTAT GTAGTTTGC           TTTTTCTTCGTGATT  89 62
 JR441_13365 2591352 .. 2591378 - -16.7  -5.59879   TATAAACATAAAAAA         GCGGAGCAAAC ACATG GTTTGCTCCGC         TACCCTAGTTTCTCT 100 80
        czcD 2590100 .. 2590110 -  -5.4  -2.82516   GCCCCGATTACTATA                 GTGT CGT ACAC                 ATTATCACCCCGCCA  52 113
 JR441_13355 2589036 .. 2589066 -  -4.1  -5.09895   TATTCACGCAAAAAA       TAGAGCAGTAA ACATGTGAG TTACTGCTCTG       CTTCGTTTATTCACC  74 32
 JR441_13345 2586969 .. 2586983 -  -2.2  -2.65046   GAAAAACAATAAACC               TTCAAA CAT TTTAAA               TCCCCCACCGTCTAA  40 37
 JR441_13340 2586786 .. 2586807 -  -8.7  -5.56372   AAAGCAAAATAAAAA           CACACCTGA ATTT TCTGGTGTG            TTTCAATAATATCCA 100 52
 JR441_13335 2585177 .. 2585202 - -11.3  -5.15969   CTGCAAGTTAAAAAA         GCCTG-GATGAA AAT TTCATCTCAGGC         TTTAAGCATCTTATT 100 71
        bltR 2582309 .. 2582323 -  -2.9  -3.13947   CACAACAGAAACAAT               TTTTC CATAT GAAAA               TCTCGTAATCTTACA  45 36
 JR441_13315 NONE
 JR441_13310 2581070 .. 2581091 - -11.7  -3.96681   CGAATAAAGCAATAA           GCCGATTTA ATTT TAAATCGGC            TTTATTTATCAATTA  91 165
 JR441_13305 2580221 .. 2580243 -  -9.2  -5.00642   TAACGCATATAAAAA           TTCGTCAACC TTA GGTTGATGAA           TTTTTATCGGCTCTT 100 29
 JR441_13300 2579508 .. 2579519 -  -4.4  -2.50779   ACTAGAAGTTAATAC                CATG TATT CATG                 CCCCTTTTATATTTG  47 126
 JR441_13295 2578734 .. 2578751 -  -4.1  -3.43104   AATCAGTTAAGAATA             GAAGGCA CATT TGCGTTC              CTACAACCTTCTGCG  50 151
 JR441_13285 NONE
 JR441_13280 2577114 .. 2577136 -  -4.9  -4.54727   CCTTTCAAAGGAAAA           GGGTATC TTTTTATTC GATACCC           TTTCACATTATTAGC  71 36
 JR441_13275 2575991 .. 2576017 - -11.7  -4.40003   CTTTATAAACAGAAA         GAGGAGCAAAC GTATG GTTTACTCCTC         TAACTTAGTTTCTTT  95 319
 JR441_13270 2573976 .. 2574008 - -10.8  -5.54264   AAATATGTAAAAAAA      GATAGTTTAGCC CTCATAATC GGCTAAACTATC      CCCTTCTCAAATCCT 100 452
 JR441_13260 2571731 .. 2571752 -  -8.7  -4.30034   AAAATCTCATTAAAA           CTGCCCATCC GAT GG-CGGGCAG           TTTAATTATTACCTC  83 34
 JR441_13245 2569310 .. 2569322 -  -3.4  -4.68424   CAACTGATCCAAAAA                CTTC CTTAT GAAG                AACAATCTCTTCTCT  64 173
 JR441_13240 2568808 .. 2568824 -  -5.1  -3.87869   TGAATCCTTTACAAA              CCCTTAC GTG ACAAGGG              TTTTTGTTGTTTTTC  61 148
 JR441_13230 2567887 .. 2567902 -  -2.6  -2.73875   CTTTTTTCAAGATGA              CTTTCA TAAT TAAAAG               GCCTCCTTTGTGAAT  41 46
 JR441_13225 NONE
 JR441_13220 NONE
 JR441_13215 NONE
 JR441_13210 NONE
 JR441_13205 2566508 .. 2566527 -  -3.5  -3.91984   ATAGCCTTTAAAGAA            GTCCACT TTGCCG AGTGGGC             TTTTTTATTGCGCAT  55 30
 JR441_13200 NONE
 JR441_13195 NONE
 JR441_13190 NONE
 JR441_13185 NONE
 JR441_13180 2562890 .. 2562908 -  -3.8  -3.02471   TTGTCAGCAGAGACA             CGACTGCT TTA AGCACTCA             GCATCCGCTCCATTT  47 15
 JR441_13175 2562341 .. 2562363 -  -7.7  -3.77588   AGTTCATATCAAGAA           CACTGAGGC TAAGC GCTTCAGTG           TTTTTTATTTTTACG  72 36
 JR441_13170 2562061 .. 2562079 -  -4.7  -3.63228   TTTACTACAAACCAA             TTTTAAG TGCTT CTTAAAA             CAAAGTTTATACCAC  57 32
 JR441_13165 2561304 .. 2561347 -  -8.9  -5.63517   TTTTCAAATAAAAAA CGGACACCAAACAAACAAC GTAAAT GCTGTAAGTTCAGTGTCCG CAGGCTTTCCGTCTT 100 44
 JR441_13160 2560794 .. 2560806 -  -3.3  -2.62244   TGGCTCAATAAAATT                TCTGC CGC GCCGA                CCTGCCTCCCATTTT  43 39
 JR441_13155 2560046 .. 2560065 -  -7.8  -5.57888   AGCAAAAAAATAAAA            GCTCCCCC ATGT AGGAGAGC             GCATATGGTACTTTT 100 447
 JR441_13150 NONE
 JR441_13145 NONE
 JR441_13140 NONE
 JR441_13135 NONE
 JR441_13130 NONE
 JR441_13125 NONE
 JR441_13120 NONE
 JR441_13115 NONE
 JR441_13110 NONE
 JR441_13105 NONE
 JR441_13100 NONE
 JR441_13095 NONE
 JR441_13090 NONE
 JR441_13085 NONE
 JR441_13080 2548085 .. 2548106 -  -9.5   -5.5074   TAAGCCAACAAAAAA           GACAACCAC AAAA ATGGTTGTC            TAGTGTATAATTATT 100 519
 JR441_13075 NONE
 JR441_13070 NONE
 JR441_13065 NONE
 JR441_13060 NONE
 JR441_13055 NONE
 JR441_13050 NONE
 JR441_13045 NONE
 JR441_13040 NONE
 JR441_13035 2538706 .. 2538719 -  -4.5  -2.90194   AGCTGTGTAATCATA               CAAGG ACCA CCTCG                TTATTATTGAGCGTG  48 7
 JR441_13030 NONE
 JR441_13025 NONE
 JR441_13020 NONE
 JR441_13015 2536796 .. 2536810 -  -2.8  -2.80511   TTTACAACGGAACCA               CCTCCT TTA AGGAAA               AATAAAAAAGCCCTA  42 38
 JR441_13010 2535829 .. 2535858 -  -9.9  -5.65927   GAGGCAAATAAAAAA       GGACAGCCGGATC TTAT GAGACGGCCGTCC        CTCTAACTGAAAAGT 100 9
 JR441_13005 2535366 .. 2535386 - -11.1  -5.82172   AGTAAGATAAAAAAA            GCCACTGGC TTA GCCAGCAGC            TTTGTCTGCGTTATT 100 14
        cwlA 2534477 .. 2534503 - -12.4  -3.03755   AAATAAACATAAGTA         TCTCCTTGAGAA AGA TACTCAAGGAGA         CTATTTATTTACTTC  85 34
 JR441_12995 NONE
 JR441_12990 2533260 .. 2533280 - -13.3  -3.33671   AGAGTCACTTTATAA            GCCCCTCTC AAT GAGAAGGGC            TTATTTTATTTAATT  95 235
 JR441_12955 2528151 .. 2528162 -    -3  -4.74132   ATATGTTATTAAAAA                CAAT TTCG ATTG                 GATAATCAACCAAAC  65 41
 JR441_12950 NONE
 JR441_12945 2526779 .. 2526796 -  -6.3   -5.7827   AAGACAAATAAAAAA             GGAACTC ATTT GAATTCC              TTTTTATAACTTATT  91 39
 JR441_12930 2524339 .. 2524360 -  -7.4  -5.79595   CTCCAAAACAAAAAA           GATACCAA TATAGT TTGGTATC            TTAAATAAAGTGAAT 100 198
 JR441_12920 NONE
 JR441_12915 2520759 .. 2520778 -  -2.2  -3.33298   TGCAAGCAAATAAAT            CAATTTAT TTTG ATTAATTG             TAAAACCCGCTAAAA  45 298
        arsR 2520349 .. 2520365 -  -6.7  -2.59565   AATTTGATATAATAC              CTAAAAA ATT TTTTTAG              CAGCAATCTCCTTCA  57 22
 JR441_12905 NONE
        acr3 NONE
 JR441_12895 2518327 .. 2518348 -  -5.9  -5.85737   ACATTAATAAAAAAA           GGACACATA TAAA TATGCATCC            TTTAACAAAAGAGTT  93 44
 JR441_12890 2516395 .. 2516414 -  -9.2  -4.54821   ATTGTAATTACAAAA            GGGGGGTG CATA CACCCCTC             TTTAATACGTTTCAA  91 27
        nucB 2515405 .. 2515424 -  -9.3  -3.40878   AGGATTGTAACAACA            GAGGCTC AAGAAA GAGCCTC             TTCTTTATTACTGCA  76 33
         gnd 2513511 .. 2513534 -  -8.9  -5.41746   AAGGTGCCAAAAAAA          TAAGGAGGC TTGTTG GCCCCCTTA           CTTTTTTTCTGTCGC 100 23
        cwlH 2511902 .. 2511930 -    -6  -5.34857   CCAAAGAAAAGAAAA        TAACCTGAATCC GCACT GGAAACAGGTTA        TCCGTTAAATCCTGC  89 43
 JR441_12855 2510763 .. 2510780 -  -7.7  -5.14965   ATTTTCAGCAAAAAA             CACCCCT AAAA AGAGGTG              TTTTAAAGGGCCGGT  93 210
 JR441_12845 NONE
        yqeH NONE
 JR441_12835 NONE
        yhbY NONE
 JR441_12825 NONE
        yqeK NONE
        rsfS NONE
 JR441_12810 2505138 .. 2505159 - -11.7  -5.07053   AAGCATTTTAAAAAA           CCATCGTTT TAGG AAACGATGG            TTTTTGATTTCTGCG 100 12
       comEA NONE
 JR441_12795 2502907 .. 2502935 -  -2.4   -2.5571   AGGCAATAACAAACG        CGAATTACGCAT TCATC ACACGTAGCTCG        TGAAAAGTGTATTCG  40 12
 JR441_12790 2500434 .. 2500448 -  -2.8  -5.42259   TGATTTTGAAAAAAA               CGTTCA AAG CAAACG               AAATGATGCTGTAGA  79 165
 JR441_12780 NONE
        holA 2499135 .. 2499156 -  -8.7   -5.1523   TGCATAATATAAAAA           CGATCCTCA ATAA TGGGGATCG            TTTTTTTCATTTCTT 100 10
         gpr NONE
 JR441_12760 NONE
 JR441_12755 2495880 .. 2495892 -  -4.1  -4.68601   ATGTAAAACAAGAAA                GAGAA AAG TTCCC                TATCATATCTGGGCT  66 60
        lepA 2493929 .. 2493949 - -12.6  -4.14627   TCTTTACAGAAAGAA            GCCGCAGT ACAAG ACTGCGGC            GGCTTCTATTGTTTT  95 31
        hemW NONE
        hrcA 2491608 .. 2491628 - -11.9   -2.7728   CTCAAAGTGTAAGGA            GAAGGACAG ATG CTGCCCTTC            GATAAAATTTGCCAA  84 48
        grpE NONE
        dnaK 2489051 .. 2489079 - -10.4   -5.7946   CGGGCAAGAAAAAAA        GTCAAAGCCAAG AGATG CCTGACTTTGAC        TTTCTAATCATTGAA 100 103
        dnaJ 2487835 .. 2487848 -  -2.3  -2.72459   CATCCAATAATTAAT               CGCCT TTAA ACGCG                CGTTTTACCTTGTCA  40 7
        prmA NONE
 JR441_12715 NONE
        mtaB 2484691 .. 2484712 -  -7.3  -5.63517   CGGCTAAATAAAAAA           CCGGTACAT TTTA ATGCACCGA            TTTTTTAGGTTAAGA 100 35
        rpsU NONE
 JR441_12695 2482919 .. 2482941 - -11.4  -5.64274   TTATGTATAAAAAAA           GACATCTCTC TTA GAAAGATGTC           CTTTTCTTTGCCATT 100 40
 JR441_12690 NONE
        floA NONE
 JR441_12680 2480002 .. 2480043 - -13.9  -4.96848   TGCCCCATACAAAAA GAACCCCCTTTCATCTCAT ATGT ATGATTTGAAAGGAGGTTC  TAACACTTTAATTTT 100 33
        yqfC NONE
        yqfD NONE
 JR441_12665 2477509 .. 2477534 -  -9.1  -5.00765   AAGCAATCATAAAAA         TGACCCGAT AACGCGCG ATCGGGTCA          TTCAGCATTAATTTT 100 33
        pgpH NONE
        ybeY NONE
 JR441_12650 NONE
 JR441_12645 NONE
         era NONE
 JR441_12635 NONE
        recO 2471748 .. 2471790 - -17.9  -5.30155   GCAGCAACCAAAAAA CTCCCGTCTCTATGCTTGC CAGCC GCAAACATAGGGACGAGAG TTCTCCCGCGGTTCC 100 227
        glyQ NONE
        glyS 2468737 .. 2468764 -  -4.1  -4.18161   TATAAATGGGGAAAA        GACGATTACCG ATCACA CAGCAACCGCC         TTTTCTCTCTTTATT  61 36
        ccpN NONE
 JR441_12610 2467145 .. 2467165 -  -4.7  -4.70659   TGGCACAGCCAAAAA            CCCAGGA TAGAGCG TCCTGAG            TTATATGTTTTTTGT  71 26
 JR441_12605 NONE
 JR441_12600 NONE
        rpoD 2463229 .. 2463258 -  -8.7  -5.75945   ATCTTTTAAAAAAAA       GA-AGAACGGATCT TCA AGACCCGTTCCATC       TTATTCGAGGAAATC 100 26
        cccA 2462513 .. 2462537 -  -9.9   -5.2853   CAGTCAAAAATAAAA          GGCTGTCGAGA ACA TCTCGGCGGCC          TGTGAATGTATAAAG 100 56
 JR441_12585 NONE
 JR441_12580 2460521 .. 2460541 - -11.2  -5.48054   AGTAAAAGCAAAAAA            CTGAGGCT GTAAA AGCCTCAG            TTTTTTTATAGAAAT 100 31
        cshB 2457229 .. 2457240 -  -2.2  -3.15544   GCCTATTCTCAGCAA                CAGG TTCC CCTA                 CTTTCTTTTCTTAGA  43 23
 JR441_12560 2456313 .. 2456330 -  -8.4   -5.1925   TTACAAGCTAAAAAA             TGGGGG TGTTAT CCCCCA              TTTTTTATTGCTGTA 100 30
 JR441_12550 2454971 .. 2455005 -    -8  -4.76041   TACATGTATGAAAAA    GAAAATGGC-AGCTG TCTGTC CAGCAAGCCATTTTC     TTTACTGCAGATAAA  88 77
         zur 2454436 .. 2454470 - -14.4  -3.63341   AATACGTGTCAATAA     CTGAAAAAGGAGCCCA AAC CGGGCCCCTTTTTCAT     ATATACGCATTTTAC 100 37
 JR441_12535 2453305 .. 2453326 - -14.5  -5.28414   GAAGAAACACAAAAA           GCTTGACGG GAAC CCGTCAAGC            TTTTTTGTGTTAGAA 100 35
 JR441_12515 2450163 .. 2450179 -  -4.4  -2.80354   TATATGTACTGAAAT             GC-CGCT TCAC AGCGAGC              CTTTCTTCATTCAAT  48 153
 JR441_12510 2449488 .. 2449511 - -10.4  -5.80248   GAAGACATAAAAAAA          CAAGGTCC-CA TAA TGAGGACCTTG          TTTGTGCCATTATTT 100 35
 JR441_12505 2448040 .. 2448059 -  -5.7  -5.05113   TTTACAGAAAGAAAA            GACACTC AAGTAA GAGTGCC             AGTTTTCATTTTAAA  78 88
 JR441_12500 2445832 .. 2445850 -   -11  -5.93809   TTTGTATAAAAAAAA             CGCCCACA TCA TGTGAGCG             TTTCTTTTTAATTAT 100 33
 JR441_12495 NONE
        pstC NONE
        pstA NONE
 JR441_12480 NONE
 JR441_12475 2441273 .. 2441289 - -12.3  -5.70829   AACACGATAAAAAAA              CAGGCTG ACT CAGCCTG              TTTTTTTCATCCAAA 100 32
 JR441_12460 NONE
 JR441_12455 2438695 .. 2438706 -  -2.2  -3.37912   GACTTATATATAATA                CCAC TATA ATGG                 ACGGAATGCTAGGCT  45 46
        rpmG 2438438 .. 2438463 - -10.5  -5.80817   CGGAATAGAAAAAAA         GCCAGAACCTT TTTC AAAGCTCTGGC          TTTTTTCTTACACCT 100 56
 JR441_12445 NONE
 JR441_12440 2437586 .. 2437602 -    -8  -5.38497   ACTGAAAGCAAAAAA              TCCCGT TTTTC ACGGGA              TTTTAGAAAGCTTGT  95 28
        yqgP 2435954 .. 2435971 -  -4.8  -3.53566   AGTCAAGAAGAAAAC             GCTGAC AAAAAA GCCAGC              CTCCTTTCCATATTC  57 46
 JR441_12430 NONE
 JR441_12425 2434642 .. 2434652 -  -2.6  -3.94333   CATTAACACATCAAA                 TTAA ATC TTAA                 CCTGAGCACAACAAA  52 64
 JR441_12420 2432619 .. 2432654 -  -7.6  -5.47218   GCGTATTTAAAAAAA    GAAAGCCTCCCGC-TCA CTT TGACGCGGGAGACATTG    TGATTACGATGCCTG 100 29
 JR441_12415 NONE
 JR441_12410 NONE
 JR441_12405 2429977 .. 2429998 - -13.1  -4.35518   AACCGCACATTAAAA           CCTGTATCC GATC GGATACAGG            TTTATTTTTATGGCT 100 33
 JR441_12395 2428979 .. 2429003 -   -13  -4.03204   CATTAAATGCAGAAA          GAGACAAACC TTATC GGTTTGTCTC          TTTTTTTACAATGAA  95 31
        mgsR 2428065 .. 2428104 - -10.8  -4.66953   TGAACAGGTGAAAAA  CCGAAGACAAGCTGATTC GAAT AAATCAGCGGATCTTCGG   TTTTTCATCATGCAG  95 33
       rsbRD 2426991 .. 2427019 -  -9.6  -5.55698   TAGAAGTTAAAAAAA        GCTGAATAGCCC GTGAA AGGCTGTTCAGC        TGCTATCTTTCAAGA 100 58
        corA NONE
 JR441_12360 2424337 .. 2424359 - -14.2  -5.64873   CCCAATAATAAAAAA           GCAGACATGG TCA CCATGCCTGC           TTGATTCCATTTTCA 100 41
       comGA NONE
       comGB NONE
       comGC NONE
       comGD NONE
       comGE NONE
       comGF NONE
       comGG NONE
 JR441_12320 2419744 .. 2419765 -  -2.9  -6.00814   AAGAAGCAAAAAAAA           GGTACCCGC TCGC ACAGGTACT            GTTCAAACAAAAAGT 100 233
        tapA NONE
 JR441_12305 2417991 .. 2418002 -  -5.8  -3.71378   GATTTTATATCGAAA                CCTG TTGC CAGG                 TTTACAACTGAAGTT  63 39
        tasA 2417116 .. 2417153 - -17.1  -2.93073   TTTTGTCAATAACCA   TCGAGACGGCCCAGTAT ATGA ATACTGGGCCGTCTCTT    TTTATGGCTGTTATT 100 39
        gcvT NONE
       gcvPA NONE
       gcvPB 2409468 .. 2409488 - -14.1  -4.30977   AAGAAATAAAGCAAA            CAGCTGTCT GGT AGACAGCTG            TTTTTATTTATCTTT 100 33
        lipM 2408014 .. 2408027 -  -2.4  -3.43071   GTTTACACTAATGAA               CTTG AAAAAA CAAG                GATGCTCCGCGGGTC  45 52
        mntR 2407501 .. 2407522 - -10.1  -5.15634   CAGCGTATCAAAAAA           GACGGCCTC CTTC GAGACCGCC            TTTTTACTGATTATG 100 29
 JR441_12245 2406464 .. 2406479 -  -2.5   -5.7946   TTCTCAAGAAAAAAA              GCCAG ACTCAG CTGAC               TGTTATAGAAGGGAA  93 71
 JR441_12230 2404327 .. 2404345 -  -7.5  -5.08824   TTCTCATGTAAAAAA             TGTTCAC TTCTC GTGAACA             TTTTATCATACTGGA  93 54
        aroQ NONE
        papA 2402786 .. 2402805 -  -2.2  -2.74563   CCTATATTCCAATCA            CAAAATAA TAAG TTCTTTTG             GGGAATGGGTGATTG  40 3
         efp 2402163 .. 2402186 -   -11  -5.60993   TTGGGCACAAAAAAA          GCCTGCTCCC ATTT GGGAACAGAC           TTCTTTTTTTCTTTC 100 40
 JR441_12210 NONE
    spoIIIAA NONE
 JR441_12200 NONE
    spoIIIAC NONE
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
    spoIIIAH 2396404 .. 2396422 - -11.7  -4.76892   ACAGCAACGCAAAAA             GCCCGCT TGTTT AGCGGGC             TTCTTTTTCCTCTTT 100 42
        accB NONE
        accC NONE
        yqhY 2393973 .. 2393995 -    -7  -5.43866   TAACGTGTAAAAAAA           CCAAAGGG CCGCCCT CCCCTTGG           TTTCGTGTTAAGCCA 100 42
        nusB NONE
        folD NONE
 JR441_12140 NONE
 JR441_12135 NONE
 JR441_12130 2389694 .. 2389708 -  -6.4  -4.42386   CCTGTATTGATAAAA               GATCCA AAG CGGATC               AACTCACTTTCAGCA  76 192
 JR441_12125 NONE
 JR441_12120 2386940 .. 2386963 - -11.2  -5.31456   TGAATGCAGAAAAAA          GGAATAATAG CGCC CTATTATTCC           GGTACATCTGCTTTT 100 19
        argR NONE
        recN 2384621 .. 2384645 - -14.4  -5.52384   TGTGCACGAAAAAAA          TAAGCTGCGC TTCTC GCGCAGCTTA          CCCAGTTGTTTTGAC 100 23
      spoIVB 2383169 .. 2383187 - -14.6  -6.11229   ATCAAAATAAAAAAA             CTGCCGGA AAC TCCGGCAG             TCAGCTTGCTTTTTC 100 26
       spo0A 2382037 .. 2382076 -  -8.8  -5.07652   GTCCCCAAAACAAAA  CGCCTCCTATTTATCAGC GCAA ACTAATAAATAAAAGACG   TTTGATTTAATGACC 100 58
 JR441_12085 NONE
 JR441_12080 NONE
 JR441_12075 2378214 .. 2378236 -  -7.7  -5.32565   GAATGAATGAAAAAA           GAAGGCTGC GTCAA ACAGCCTCC           TTCTAACAACTATTC  95 35
 JR441_12070 NONE
 JR441_12065 2376046 .. 2376059 -  -5.3  -3.08679   CCCCCGGATGGAATA               GACTT CAGG AAGTC                TTCTCCTCATAGTCA  53 16
 JR441_12060 NONE
        mmgD NONE
 JR441_12050 NONE
        prpB 2371345 .. 2371362 - -12.7  -5.45726   GATAGCTGAAAAAAA             GCCGGAG AATG CTCCGGC              TTTTTTTGTTGCATT 100 39
 JR441_12035 NONE
        yqiS NONE
         bcd NONE
 JR441_12020 NONE
        lpdA 2364196 .. 2364206 -  -6.8  -3.80855   GCTTTTAAAAATGAA                 TGGC TTT GCCA                 TCTGCGGCAAGCGCT  66 4
      bfmBAA NONE
      bfmBAB NONE
       bfmBB 2360833 .. 2360863 - -11.4  -5.75478   AATCATAGAAAAAAA       GCATTTTTTGAAAC AAA ACTTCAAAAAATGC       TCTTTTTGCTTATTT 100 39
        brxB 2357112 .. 2357135 -  -7.4  -5.64274   TTATGCACAAAAAAA          CCCGGGCTGCT TTA AGCATCC-GGG          TTGTTCGTCTTATAC 100 35
        artP 2356080 .. 2356101 - -10.2  -5.10461   CCTATTCAATAAAAA           GGCTCAAC GAAAAA GTTGAGCC            GCTTTTTTTTACTTC 100 34
        artQ NONE
        artR 2354622 .. 2354643 -  -5.2   -5.4505   TTCTTCAATAAAAAA           GAAG-AGGC GGCCA GCCTTCTTC           TTTTTTATATTCTAT  88 37
 JR441_11960 2353560 .. 2353613 -  -7.1  -5.64304   GAACATAAGAAAAAA CGCATAAGCTCCTCCTTTTTCATTAG GTTGA CCAATGAA---GGAAGAGCTCATGCG AATCATCCGAGTGAT 100 28
 JR441_11955 2352998 .. 2353017 -  -2.9  -3.15544   CTGTACTCTCAGGAA            TCGTCAT GTTTCT ATAACGA             TAAAAAAGCAGGCGC  45 42
         mce NONE
 JR441_11940 2350900 .. 2350912 -  -7.7  -2.89602   CCCTCCATATTAAAG                CGGTA TGT TACCG                TGCTTTTTTTTCGGT  64 7
 JR441_11935 2349725 .. 2349735 -  -8.2  -5.47821   ATGGAGCTAAAAAAA                 CCCG ATG CGGG                 AAATCGCACTCGGGT 100 51
 JR441_11915 2346279 .. 2346289 -  -2.6  -4.17023   TTAATCATTTTAAAA                 TTTA AAT TAAA                 ATAAAATGATATTTA  55 84
        gndA 2344793 .. 2344818 - -15.5  -4.89477   TCCTTAATAACAAAA         CCCCCAAAGCT TAAG AGCTTCGGGGG          TTTCTATTGATTACT 100 36
 JR441_11900 2342027 .. 2342039 -  -6.3  -2.91593   CATCTCCTTATAAAG                CGTAA TGA TTACG                TTTTATTATACAACG  55 73
        rpmG 2341823 .. 2341848 -  -4.7  -5.54192   ATTAACGTAAAAAAA         GACCGGG CCGTAAGGGATT CCCGGTC          TTTTATATTATTTTG  88 33
 JR441_11880 2338070 .. 2338090 - -14.1  -5.10767   GATGTAAGACAAAAA            CAGAAGGCA CAG TGCCTTCTG            TTTTTTATTTTTCCC 100 30
 JR441_11870 NONE
 JR441_11865 2334975 .. 2335004 -  -2.2  -2.55378   AAGCAGAGCATGAAG       GACTTCTGAATG AACTGA CATTCAACAATC        TCTCCCTTCCACTAT  40 92
        dsdA 2333608 .. 2333628 -  -6.9  -4.13767   CTCTGTAGGTTAAAA            CCCTTACAA AGA TTGTAACGG            AAAACCTTTTCACTG  73 46
        coaA NONE
 JR441_11850 2332030 .. 2332052 - -13.5  -5.95539   CTTTAAATAAAAAAA           CGGGAGAGA ATCAA TCTCTCCCG           CAACAATGAGGTGAT 100 200
 JR441_11830 NONE
 JR441_11825 2328159 .. 2328171 -  -3.5  -3.28712   CTCTTTTTCTCACAA                TATAA AAA TTATA                TTTTGCCTGGCTGGA  47 143
 JR441_11820 NONE
 JR441_11815 NONE
 JR441_11810 NONE
 JR441_11805 NONE
 JR441_11800 2325648 .. 2325673 -  -9.8  -5.64304   CAACAGAATAAAAAA         GCGAAAG-GCC TCTTC GGCTCTTTCGC         TTTTTTATGTTACAG 100 35
 JR441_11790 2324317 .. 2324338 - -11.6  -4.95155   CTCATAGCAGAAAAA           CCAGCACC TGTACG GGTGCTGG            TTTATTTATATTGAT 100 27
        nudF NONE
 JR441_11770 2321255 .. 2321295 - -11.9  -3.35964   CGAGAAACAAAAGCA GACTGCTCCTCA-GGCCA TAGAAT TGGCCACGTGGAGCAGCC  TTGACTTTACCATTT  85 141
        ansA NONE
        aspA 2318356 .. 2318393 - -10.2  -3.55444   TCCCTATGTTGTAAA  CAGCTTATTCA--TCCGA CTAT TCGGAGATGAATAAGCTG   CATTTTGTTCAAATT  80 41
        mleN NONE
 JR441_11745 2315490 .. 2315513 - -13.2  -6.17268   TGATAAGAAAAAAAA          CAGCACCTGC TACG ACAGGTGCTG           TTTAGCTACATTTAT 100 37
 JR441_11740 NONE
      spoIIM NONE
         fur 2313873 .. 2313893 -  -8.3  -5.34055   AGAAACAGCAAAAAA            CCCTTTCCC CAT GAGAAAAGG            TTCGCGCTCGGCACC 100 43
 JR441_11725 NONE
        xerD 2312645 .. 2312662 - -12.7  -5.63517   GCTCTAAACAAAAAA             GCCGCAG CCAC CTGCGGC              TATGCTCGCGGATGA 100 25
        deoB NONE
 JR441_11710 2310436 .. 2310464 - -13.3  -5.40072   TTGGGCGTAAAAAAA        GACAGCTGTGT GAATCAG ACACAGCTGTC        TTTTGGTCCTGCATT 100 50
        dacF 2309123 .. 2309134 -    -3  -3.06183   TCGATTTCGACGGAA                TGAA TTCC TTCA                 CCGTGACAAAACTAG  43 57
     spoIIAA NONE
     spoIIAB 2308287 .. 2308298 -    -3   -2.7186   AAATCTCCTTAATTA                CAAA GCGC TTTG                 CTTTTTGATAAGTGC  41 7
        sigF 2307483 .. 2307505 - -14.2  -5.36441   TTTGCACACAAAAAA           GCTAGCCTGC ACT GCAGACTAGC           CATCCGTATGATCCA 100 21
      spoVAA 2306759 .. 2306771 -  -3.4  -2.64704   GAACAATACACTAAC                GATC ATGCA GATC                CTTTATGGTTTCTTG  43 8
      spoVAB NONE
      spoVAC NONE
      spoVAD 2304851 .. 2304863 -  -3.4  -3.20078   TAGTCCATATTAAGA                TGCA CCTCC TGCA                CGCTCAAATACAACC  47 7
      spoVAE NONE
     spoVAEA NONE
      spoVAF 2302370 .. 2302390 -  -6.9  -3.76224   CGCTTATGGATGAAA            GGACAGT TTTATGG ACTGTCC            CTTCATAATTAAGAC  69 77
        lysA 2300993 .. 2301010 - -12.7    -5.011   ATTCAAATAAGAAAA             GCGCCGA AAAA TCGGCGC              TTTCTTTTATTGCTT 100 32
 JR441_11640 2299392 .. 2299412 -    -9   -5.4833   TTACCCAATAAAAAA            GCTCCCTC TATAT GAGGAAGC            CTTTTGCCTGCCAAT 100 40
 JR441_11625 NONE
 JR441_11620 NONE
 JR441_11615 2296971 .. 2296981 -  -3.2  -5.86332   CGAATCGAAAAAAAA                 TCCC ATT AGGA                 CCATTGAAGTGATTT  88 392
        lepB 2296332 .. 2296351 -   -10  -5.53079   AAAAGATATAAAAAA            GCAGCCTC TCGG GAAGCTGC             TTGATCCTAATTTGT 100 32
 JR441_11600 2295744 .. 2295780 - -21.9  -4.88388   ACAATTTGAGAAAAA    CAAAACATCACCCTTCG ATC CGAAAGGTGATGTTTTG    TTAATCATTCACTTT 100 26
        ribD NONE
        ribE NONE
 JR441_11585 NONE
        ribH NONE
        ribT 2291422 .. 2291445 - -16.8  -5.97575   AACGCAGAAAAAAAA          GCAGAGGCTG ATGA CAGCCTCTGC           TTAATTATTGTATGA 100 26
        scpA NONE
        scpB NONE
 JR441_11555 2288668 .. 2288688 - -11.2  -5.88197   GCAAACATAAAAAAA            CTCTCCCT GAAAA AGGGAGAG            TAAACGTTATCTGAT 100 32
        dacB NONE
        spmA NONE
        spmB 2286297 .. 2286311 -  -4.2  -5.89947   CAAATCTAAAAAAAA               CGCC GTTTTCA GGCG               CTCCCAAATAATAAC  91 19
        rluB NONE
        resA NONE
        resB NONE
        resC NONE
        resD NONE
        resE 2279393 .. 2279413 - -12.6  -5.52384   TGGCTATTAAAAAAA            CACCCGCT CAGTC AGCGGGTG            TTTCTTATGGAACAA 100 68
        sigX NONE
        rsiX 2277610 .. 2277625 -  -3.9  -5.31059   ATAGCAACTAAAAAA              GAGCC TCAAAG GGCCC               ATTTTAGTTTAAGAA  78 29
 JR441_11495 2276717 .. 2276736 - -10.8  -5.68023   CCATAATTAAAAAAA            CTCAAGCT ATAT AGCTTGAG             TTTTTTTATTGTTCT 100 39
        fmnP 2274037 .. 2274052 - -10.4  -5.66868   AAGTAACTAAAAAAA              GCTCCC GAAC GGGAGC               TTTTTTATTTAATGG 100 34
 JR441_11475 NONE
 JR441_11470 NONE
 JR441_11465 NONE
 JR441_11460 NONE
 JR441_11455 2269083 .. 2269094 -    -3  -3.29144   CCATTCTTTTTAGAA                CTTA TCAA TAAG                 ACGGACAATAAAAAA  46 74
 JR441_11450 2268152 .. 2268171 -  -6.6  -4.04206   CTACTTGCACACAAA            TCATATAA CACA TTATATGA             GATGATGAGTCATAG  70 132
 JR441_11445 2267504 .. 2267519 -    -9  -5.95166   TTTAACGAAAAAAAA              CTGCTG AAAT CAGCAG               TTTTCCGTTGCATTC 100 41
        gudB 2266056 .. 2266077 -  -7.4   -5.7946   TTCCGAATAAAAAAA           TCTCCTAT TTTATC ATAGGAGA            TTTTTTATTTTTATG 100 53
 JR441_11435 2264990 .. 2265014 -  -9.4  -5.86609   TTAAAAAAACAAAAA          GAGCATACGA ATGCA TCATATGCTC          CTCATCTTTAATGGT 100 33
        prsW 2264223 .. 2264243 - -12.5  -5.37043   ACTGCACACAAAAAA            GCCGCACGG TTG CTGTGCGGC            TTCTATACTTGCATC 100 28
        sleB NONE
        ypeB 2261757 .. 2261779 -  -8.5  -5.64006   ACGTAATGAAAAAAA           GGAAAAGAC ATTTA GTCCTTTCC           TCCTGTTTTTTATAG 100 35
        dgrA NONE
 JR441_11410 2260826 .. 2260842 -  -3.7  -2.73203   TGATGAATAATTAAT              GTTTGAA GGT TTCAATC              CTATTGTTTTCCTCC  45 4
 JR441_11405 2259936 .. 2259960 -  -9.5  -4.01902   ATATGTATTAAAGAA          TCATCCAAAAA AGT TTTTTGAATGA          TCAATAAAAAGTTTT  85 133
        rpsA NONE
 JR441_11395 2257591 .. 2257615 -  -9.4  -5.16133   ATCATAATACAAAAA         GCCC-AAACCA CATA TGGTTTTGGGC          TTTTATCATTTATCG 100 35
 JR441_11385 NONE
 JR441_11380 NONE
 JR441_11375 2255631 .. 2255646 -    -9  -4.72007   TTTTATGAAAAGAAA              CCCTTC AGAG GAAGGG               CTTAACTCATTTATT 100 72
        engA NONE
        gpsA 2252944 .. 2252973 -  -9.4   -5.9218   GATAGAACAAAAAAA       CTGAAGCAAAGA GGGGGA CCTTCGCTTCAG        TCAACTTGACTATAT 100 226
 JR441_11360 NONE
 JR441_11355 2251843 .. 2251875 -  -9.3  -5.49569   TATTAATATAAAAAA      CCTTTCTCCCT ATTTGTATGCA AGGGAGAAAGG      TTCATTCCTTTTTCA 100 27
      spoIVA 2250187 .. 2250210 -  -3.2  -5.69793   AGAGCAAAGAAAAAA          GACCTC-CCAT TCT ATAAAGAGGTC          TACCGGTATTACAGG  84 34
         hbs 2249485 .. 2249513 - -14.7  -3.34715   CATGCTCTTGAAATA        TGAAAAGCCCCTT AGA AAGGGGCTTTTCT        GTGAAGAAATAAAGT 100 79
        folE NONE
        mtrB 2248543 .. 2248557 -  -2.7  -3.01924   CATTTGCTTTTAACA               GCGGG GACAG CCAGC               TTATTTTTTTTCGCT  43 26
 JR441_11330 NONE
        menG NONE
        hepT 2245908 .. 2245918 -  -6.8  -3.48064   CTGATAATTAATCAA                 TCCG GGG CGGA                 GAAATTTCTTAATAT  64 50
         ndk 2245222 .. 2245237 -  -7.6   -5.7946   GTTTCAATAAAAAAA              TCAGCT TTTC AGCTGA               TTTTAGATCGTTGGG 100 166
        cheR 2244351 .. 2244364 -  -2.5  -3.21036   GACTACTATAACATA               TTTTT CAGC AAAAA                GTCAGTCTATCTTTT  45 32
        aroC NONE
 JR441_11300 NONE
        aroH 2241512 .. 2241535 - -12.6  -4.76087   TATATAACAAATAAA          CCCAAAAGAA AGAC TTCTTTTGGG           TAGAATAAACATAAT 100 146
 JR441_11290 NONE
        trpD NONE
        trpC NONE
 JR441_11275 NONE
        trpB NONE
 JR441_11265 NONE
 JR441_11260 2234415 .. 2234435 -  -9.8  -3.88498   GGTTTATAGACTAAA            GAGGTGAT ATTTG ATCACCTC            TTATAAAATTTCAGC  85 26
 JR441_11255 NONE
        aroA 2231961 .. 2231981 - -12.7    -5.252   GATCTGCATAAAAAA            TCCTGAAGT AAA ACTTCAGGA            TTTTTTCGAAAGCTT 100 20
 JR441_11245 NONE
 JR441_11240 2229729 .. 2229750 - -10.9  -3.65046   CCTTTACGGCAACAA           GCCTTGCAA TTCA CTGCAAGGC            TGGTCATATTATGTG  88 34
 JR441_11235 NONE
 JR441_11230 NONE
        qcrB NONE
 JR441_11220 2227071 .. 2227087 -    -8  -5.37043   AGTCCATATAAAAAA              GCTGAC GCCGG GTCAGC              TTTTGATATTAAAAG  95 72
 JR441_11215 NONE
        ypjB 2225542 .. 2225558 - -10.8  -5.48063   ATGTAATAGAAAAAA              GGCGGC TGACC GCCGCC              CCTCATCCTTATTTA 100 34
 JR441_11200 NONE
 JR441_11195 2223338 .. 2223349 -    -3   -2.8372   CATGCGCGATCAAAG                CAAT TTTC ATTG                 TTTATCCCCCCGTCT  42 39
        mgsA NONE
       bshB1 NONE
        bshA NONE
 JR441_11175 NONE
 JR441_11170 2218756 .. 2218776 -  -6.2  -5.15969   CTGCAAGCCAAAAAA           CCTTC-CGT TACA ACGAGAAGG            ATTCTTCACTTTCTA  83 190
        panB NONE
        panC NONE
        panD 2216591 .. 2216606 -  -7.5  -5.10163   AATCTTAAAAGAAAA              CCCCC GATAAA GGGGG               CTTTTCTTCTACAAA  93 34
        dinG 2213677 .. 2213691 -  -8.5  -4.16943   TCCCACACCGCAAAA               GCCGC TTTAT GCGGC               TTTTATTCTTTTTCC  79 28
 JR441_11145 NONE
 JR441_11140 NONE
        aspB 2211652 .. 2211671 -  -6.4  -5.00642   CAATGCAGATAAAAA            GCGGCT TTTCTGTC AGCCGC             TTTTTGATCTGTTAG  82 37
        asnS 2210205 .. 2210222 -  -7.7  -4.62069   CCTTTACTGTAAAAA             GTCTCCC TTGC AGGAGAC              TCTTTTTTGTTTCAT  84 50
        dnaD NONE
         nth NONE
 JR441_11115 2208265 .. 2208284 -   -10  -5.60689   GTACACAATAAAAAA            CCTCCCGT TTTA ACAGGAGG             TTTTATCGATTCATC 100 28
 JR441_11100 2203792 .. 2203814 -   -15  -3.05384   CGCCCTTCTACGTAA           GAAGCAAGGA ATT TCCTTGCTTC           TTTATTTTTTTAGCC 100 27
 JR441_11090 2203246 .. 2203256 -  -2.4  -2.71325   TCACTCACAAATTCA                 GCCG ATG CGGT                 ATACCTTCTCAAACG  40 12
 JR441_11085 2202808 .. 2202845 - -10.1  -4.82901   GGCCCCCTATAAAAA   CGAAAAGAAGACAGCC TTTTACC GGCTGTCTTCTCTT-G   CAATTTCATCCTTTA 100 6
 JR441_11075 2202001 .. 2202031 - -12.8  -5.00616   TTTCTTTCCAAAAAA       TAAGCATGAATGAA CGA TTCATTCATGCTTT       TATCATTTAAAAAAG 100 28
 JR441_11065 2200932 .. 2200949 -  -9.1  -5.80364   AGTTGAATAAAAAAA             GCAAGGC ATAC GCCCTGC              TTATTTCGCTTTTAT 100 26
        mrfA NONE
        mrfB 2197345 .. 2197359 -  -8.6   -3.1855   CCGGGGAATATTTAA               GAGGAA TAT TTCCTC               TTCAGCCGGGCAATT  71 7
 JR441_11050 NONE
        cotD 2196734 .. 2196753 -   -10  -5.00884   ACCTGCTTTAAAAAA            TGGGGCTCC CGT GG-GCCCCA            TTTGTTGTGCTGCAT 100 73
 JR441_11040 NONE
        gpsB 2195743 .. 2195753 -  -2.6  -3.46509   CGTTAAGAACATGAA                 TTAT TAT ATAA                 CAACTGATTACAATT  46 68
        rnpB 2195294 .. 2195314 -  -8.3  -4.66537   CTTTTCAAGATAAAA            GCTCTCC TTATACG GGAGAGC            TTGTTTTCATCATTT  88 61
 JR441_11025 2194066 .. 2194088 -  -9.2  -4.00532   GGCTGAAAGATGAAA           GAAGACGC ATGCAGA GCGTCTTC           TTTTTATGCGTTTTC  85 29
 JR441_11015 2193506 .. 2193520 -   -10  -5.94214   AATACAATAAAAAAA               CTTGGC AAT GCCAAG               TTTTTTGCAGTTTAC 100 37
 JR441_11010 2191475 .. 2191494 - -12.2  -6.02919   TGACAAATAAAAAAA            GCTGACGA ACGA TCGTCAGC             TTTTTTCCATTACAT 100 35
        kdgR NONE
        kdgK NONE
         eda NONE
        kdgT 2185954 .. 2185979 -  -4.7  -4.37092   ATTGTTTGTATAAAA         GGCTGCC GGTATGTTTTGT GGCAGCC          TTTTTATTCAGTTGA  68 33
        ypwA 2184341 .. 2184363 - -13.4  -3.88029   ATTCGATATAAAAGA           GCCTGACGAC CGC GCCGCCAGGC           TTTTGATTATGACAG 100 32
         xpt NONE
        pbuX 2182125 .. 2182140 - -10.4  -5.50499   TTATATGCAAAAAAA              CTCCGC CGCG GCGGAG               TTAGACTGCTGTTTT 100 26
        bpsA NONE
        bpsB 2180449 .. 2180459 -    -4  -2.58427   AACATGGTTGAGAAT                 GATT TTC AATC                 GCTATTTTACGCTGT  45 27
        fbpC 2180241 .. 2180257 -  -7.9   -5.5208   GGAGAATAGAAAAAA              GCCGCCA TTA CGGCAGC              TTCTATAAAAGAAAA 100 69
        dynA NONE
 JR441_10940 NONE
 JR441_10935 2175962 .. 2175987 - -10.6  -5.93252   CCCAAAAATAAAAAA         CAGTATCTCT TTAATT AGAGATACTG          TTTGGATATTTATCA 100 38
        exnP 2174996 .. 2175027 - -12.5  -4.77629   AAAAGCAATACAAAA      CGCTAGAGAAGATC TAAAC GATCT-CTCTAGCG      TTCAGCTTTTCAAGC 100 7
 JR441_10910 NONE
 JR441_10905 2172776 .. 2172802 - -16.8  -4.02051   GATGAATTCAAAGAA         TAAAAACCGCAG CTT CTGCGGTTTTTA         TTTTTAGTGATTGGT 100 29
        degR 2172152 .. 2172171 - -13.6  -3.37299   GAGATGACAAATAGA            GGAGAGGC ATTC GCCTCTCC             TATTTGATTTTCATC 100 25
 JR441_10870 NONE
        hdhQ NONE
 JR441_10860 2166734 .. 2166786 -  -9.4   -4.8543   TAATTTTTATAAAAA GTGAATTCACATAAAAAAGGTGCA TGATC TGCACCTTTTTTATCTTTATTCGC CTTTTTTTCTGCTTT 100 18
        ilvD 2164715 .. 2164763 -  -9.2  -5.72616   ATTGACATAAAAAAA GCCCCCTC--TAGTATCCTTCA TCTGAAG TAAAGGATACTATAGAGAGGGC CGGATTTCAAATGTT 100 75
        brxA 2164255 .. 2164271 -  -9.4  -5.26119   CTCCCAAAAAGAAAA              TGCCCG GAAAA CGGGCA              TTTAGCAGTGCGCAT 100 27
 JR441_10845 2163444 .. 2163465 - -14.5  -4.24075   ACCGATTAACAGAAA           GCCCGTGAT ATGA ATCACGGGC            TTGTTTGAATGACTC 100 18
 JR441_10840 NONE
 JR441_10835 2162003 .. 2162024 - -10.3  -5.64304   TAACACAATAAAAAA           TCATTTCTG AACC CAGAAATGA            TTTTTTTATAGTCAG 100 37
 JR441_10830 NONE
        dfrA NONE
 JR441_10820 2160008 .. 2160028 - -12.6  -4.73094   AACAGTAACAGAAAA            GCGCAGTC TTCAC GACTGCGC            TTTTTTTATGCACGT 100 31
        ilvA 2156777 .. 2156793 -  -2.1  -2.71268   TTCTATTATATATGA              TGCCAGC CGG GCTGTCT              GTCATTTTGCGCGGT  40 53
 JR441_10800 2156426 .. 2156470 -  -7.1  -5.86965   ACTGAGCAAAAAAAA TCCTGCATGCCTCCCATTA ACGATTA CAAAGGAGGGCATGCAGGT AAAAAACGGCATGTT 100 39
        scuA NONE
 JR441_10790 NONE
 JR441_10785 NONE
        ypmT 2154106 .. 2154125 -  -2.1  -5.15634   GACCGCACGAAAAAA            GAGACGT TGTTTC ATGTCTC             TTTTTTCATGACTTA  69 31
 JR441_10775 2152679 .. 2152704 - -10.5   -5.4477   AAACGGTGAAAAAAA         GCACATACCGA TATA TAGGTATGTGC          TTTTCGCAGTGCTTC 100 43
        msrA NONE
        msrB 2151107 .. 2151135 -  -9.6  -4.98758   AAAAAGGCATAAAAA        CAAGCCTGTCTA TCCAT TAGGCAGGCCTG        TTTTTAACACTTTAT 100 37
 JR441_10750 2148539 .. 2148555 -    -8  -5.38047   TATTCATAGAAAAAA              GCAGCT GCACA AGCTGC              TTTCTATTCTAGCCG  95 34
        cgeC 2146589 .. 2146611 -  -6.9  -5.19879   CGTCAAACATAAAAA           CGGCTCCGC AGCAA GCAGAGCCT           CTGTCATCATTTAAA  90 36
        cgeD NONE
        cgeE NONE
 JR441_10720 NONE
 JR441_10715 NONE
 JR441_10710 NONE
 JR441_10705 NONE
 JR441_10700 NONE
 JR441_10695 NONE
        ablB 2139314 .. 2139330 -  -2.3  -2.62184   TTTCGGTTTATACCA              TTTGTTT TTC AAACGAA              TTCCTCCTCGCGCAT  40 49
        ablA NONE
 JR441_10680 2137631 .. 2137647 -    -3  -3.48144   AAGAATACTGAAACA              TGACTC AGGAG AAGTCA              AAATAGTTGCGTTTC  48 13
 JR441_10675 2137295 .. 2137312 - -11.3  -5.71712   GGGGACATAAAAAAA             TCCGCAG TGAT CTGCGGA              TGAAACAGCTATTAT 100 37
 JR441_10670 NONE
 JR441_10660 2136028 .. 2136056 - -16.2  -3.84873   ATAGAACACGAATAA        TAAAACCGGAGC TGACC GCTCCGGTTTTA        AGCCTCACTCACCTT 100 30
        pgpB NONE
        yodL 2134971 .. 2134986 - -10.4  -4.46581   TAAAACTGCAGAAAA              CTGCGG GTTT CCGCAG               TTTTCTTTTCATTAT  95 37
        deoD 2133894 .. 2133919 - -11.9  -4.09117   CGCATTCATAAAGAA         GAGGC-TGCCGG CAC CCAGCACGCCTC         TTGATATATTTTATT  93 36
        ldcB 2132993 .. 2133017 - -11.5  -3.52717   ACCAGACACAATGAA          GCCCGCTTA TCTAGTG TAAGCGGGC          TTTTCATTTTAAATT  87 34
        ctpA 2130333 .. 2130355 - -17.8  -5.60993   GGGCGCATAAAAAAA           CCATACGCGG CAG CCGCGTATGG           TTTTTTTTACATTTC 100 32
 JR441_10605 NONE
 JR441_10600 2126894 .. 2126918 - -15.1  -4.84274   TAAGGATATGAAAAA          CCTTAGTCCGA AAT CCGGACTAAGG          TTTTTTTATACAATC 100 31
        yodB 2125450 .. 2125479 - -10.1  -5.93809   TCCCCACAAAAAAAA       GAAGAGAGAGCTC CAAG AAGCTCTCTCTTT        TTTTCATAAATGCGG 100 351
 JR441_10580 NONE
 JR441_10575 2122986 .. 2123008 - -14.9  -5.26316   TCATCCGATAAAAAA           CGGCCTGCA ATCGA TGCAGGCCG           TTTTTTATTAATAGA 100 33
        rarD 2121521 .. 2121543 -  -3.4  -3.93061   AGCTGAAAAGCCAAA           GGCCTCAA TGGCTTT TTGACGCC           CGTTTCCACTTCACT  55 7
 JR441_10560 NONE
 JR441_10555 NONE
       bshB2 2120108 .. 2120132 -   -13  -5.46698   CTTAAAATTAAAAAA          GGTATAAGGC TTAAG GCCTTATACC          TTTTTGATTAATCAT 100 33
        cdaS 2116911 .. 2116932 -  -8.1   -5.0916   TCTTCAAGACAAAAA           GCATTCAGCT TGA AGC-GAATGC           TTTAATAAAGATACG 100 96
 JR441_10530 2115518 .. 2115542 -   -13  -4.71482   ATGAAATGGCAAAAA          GCCTGTTCTT TCGAT AAGAACAGGC          TTTTACACTATGCAT 100 33
        cwlS 2113893 .. 2113905 -  -4.8  -5.72622   GGTATAAACAAAAAA                GCCT ATAAA AGGC                TTTTTGTCATACTCA  88 44
 JR441_10520 NONE
 JR441_10515 NONE
 JR441_10510 2110321 .. 2110346 -  -5.5   -4.7339   AACAAACGCCAAAAA         GCATAGGAT TAAGGGCT ACCCTATGC          TTTTATGAAGCAGTT  75 15
        sucA NONE
        odhB 2105970 .. 2105995 -   -12  -5.17353   ATATGCATCAAAAAA         GGTACATCAC TTTATC GTGATGTACC          CTTTTTTATTATCCT 100 34
 JR441_10490 2103406 .. 2103424 -  -8.8  -5.52384   GCTCTATTAAAAAAA             GCCCCC TTTCCTC GGGGGC             TCCGTGTTTTAAAAA 100 34
 JR441_10470 2098580 .. 2098596 - -13.7  -5.71983   TTAACCACAAAAAAA              CCGCAGC TGA GCTGCGG              ATTATGTATCGATGT 100 75
 JR441_10465 2097865 .. 2097888 - -12.5  -3.61517   AGTGTGGTGTAATAA          GAACAGGGC GCACAT GCCCTGTTC           TTGTTTTTATATATA  95 85
        yocM 2096782 .. 2096797 -  -4.7   -2.6072   GATTGAATCAATTGA              TGACC GTGATG GGTCA               GATGCACTCAGTATG  46 45
 JR441_10440 NONE
 JR441_10435 2095589 .. 2095617 -  -8.9  -5.75342   TTTTTTCAAAAAAAA        GCAAGTACATCTA ATA TCGGTGTACTTGC        TTGCCATTTTTACTT 100 35
        azoJ 2094815 .. 2094840 -  -7.7  -5.03994   GTGTATATACAAAAA         GACTCCTAT TTGTAACG ATAGGAGTC          TTGGCTTTATTAGAA  89 35
        ssrS 2094406 .. 2094428 - -12.1  -5.58522   TAGATAAAATAAAAA           GCCATTTCC GAAAA GGAAATGGC           TTTCGCTACGTCTTG 100 24
        recQ NONE
 JR441_10415 2091356 .. 2091378 -  -9.2  -5.89921   AGCAGAACAAAAAAA           GACACAAGCC AAA AGCTTATGTC           TTTTATCACAATCTA 100 46
 JR441_10385 2085204 .. 2085227 - -14.6  -3.66139   TAGACACACTTCAAA          GGCCGGAGGCT ATT AGCC-CCGGCC          TGTTAGGTTTACGCC 100 34
 JR441_10380 2084544 .. 2084560 - -10.9  -5.50499   TTACACGTAAAAAAA              GCCATAC TGA GTATGGC              TTTTAATAATACGGT 100 28
        czrA 2083235 .. 2083274 -  -4.4  -5.50774   TACAATAAAGAAAAA  GACATCCTTGCCC-GCT AACAGCG AGTTAAGCAAGGATGTC  TTTTTCAATCATGCT  84 30
 JR441_10360 2081541 .. 2081568 - -12.9  -4.16904   AAGATTATAGACAAA        GAAACCTGACA GCAGTG TGTCAGGTTTC         ATATATTTTTTGCAT  95 17
 JR441_10355 2080971 .. 2081008 - -12.3  -4.63218   TTCCTCCTAACAAAA   CTAATGGCGTTAGTT TTATTATT AACTAACACCATTAG    TTTTTCAAGAGTTTA 100 41
 JR441_10350 NONE
 JR441_10345 NONE
 JR441_10340 NONE
 JR441_10335 2078086 .. 2078100 -  -2.9  -2.63455   GGAGATATACAATAT               TCTTT TAACT AAAGA               GCCATCATTTTTTAT  41 30
        csaA 2077675 .. 2077697 - -16.4  -4.28254   CCTCAATACGCAAAA           GACGTTTGCC TTA GGCAAACGTC           TTTTTTTGCGTTATC 100 36
 JR441_10320 2075304 .. 2075322 -  -9.6   -5.2015   TGAATAACAGAAAAA             GACAGCCA AAA TGACTGTC             TTATACATCACACAC 100 40
        yobL NONE
        yobK 2072681 .. 2072721 -    -2  -5.76237   TATATAAATAAAAAA TAGACCT--CCCTTGAGCCT AAG AACCTGAAGGGATAGGTCTA CCAAGAAATCACATC  80 270
 JR441_10295 NONE
 JR441_10290 2066488 .. 2066512 -  -2.9  -2.71693   CACTAATCAAACCTA          GCTATTACT TTCCACC AGTAGTAGC          GATACCTTCTATGAA  41 5
 JR441_10285 2065099 .. 2065120 -  -8.8  -3.90922   ACCTTCTTGAAATAA           GGTACTTG ATTTAA CAAGTACC            TTTTCGTTATTATTT  80 35
 JR441_10280 NONE
 JR441_10275 2062694 .. 2062734 - -12.1   -4.0802   AGCGGAACAATTAAA  GCCTATATTCACTGTTTTT AAA ATAAACAATGGATATAGGC  GGAGTATGGCAAATC  93 85
 JR441_10270 2061310 .. 2061353 - -14.8  -3.45054   CTTTATAATTCAGAA TATATAGTGAAGCTGTTGGA AAAG CCCAACAGCTTCACTTAATA GGTGTCAAATGCTCT 100 184
 JR441_10255 2057796 .. 2057811 - -11.8  -3.16534   ATTAAGCAGATCCAA              GCCCCC ATAT GGGGGC               GTTCTTATTATTGTA  84 424
        xynA 2054280 .. 2054304 -  -7.2   -5.0916   TGTGCAATATAAAAA          GAACCTGG GCAATTTCA CCAGGTTC          TTTTCTTAATTTCCA  90 525
        ppsA 2051244 .. 2051259 -    -9  -4.02132   GTTTAAATTTATAAA              GGAGCT TTTT AGCTCC               TTTTTCTCTTGTTTT  81 300
 JR441_10210 2049597 .. 2049613 -  -3.7  -4.28487   CACCACAAAATTAAA              CGTTATT ATA ATTAACG              GCAAGTTTTCATTTT  61 345
 JR441_10195 2047648 .. 2047669 -  -4.4   -5.4492   GACACATATAAAAAA           TGCTCCCA TAAGTT CAGGAGCA            CTACAAAAAACTGCT  84 51
 JR441_10190 2046931 .. 2046957 -  -9.6   -5.4148   TAAACAATGAAAAAA         GCTAATGTCT GCATGTG AGACATTAGC         TTGGCTGGCGTTTAG 100 68
 JR441_10180 NONE
 JR441_10160 NONE
 JR441_10155 NONE
 JR441_10150 2040759 .. 2040772 -  -5.3  -3.17526   GGATTAATTCAAAAT               CCTTT GTAT AAAGG                CGAGTACTAAAAAAC  55 270
 JR441_10140 2039531 .. 2039546 -  -2.6  -3.65199   AACTTTTGACTTAAA              TTAAAG TGCT CTCTAA               AGACAAGATTAAAAC  50 112
 JR441_10130 2038900 .. 2038919 -  -8.6  -5.63517   TCCGCAAATAAAAAA            GTGACCAC CAAT GTGATCAC             AAATACATCAAATAA 100 42
        oxdD 2037545 .. 2037566 -  -8.1  -4.98857   ATTCAAGCAGAAAAA           CCCTACATA ACGT TATATAGGG            ATTTGATAAAACACA  95 94
 JR441_10120 2036627 .. 2036642 -  -2.5  -4.32034   CCATGATCATGAAAA              GGAGT GGCTTA ACCCC               AAAAATACAAGCCCT  60 498
 JR441_10105 2033920 .. 2033934 -  -7.1  -4.17109   AATAACGAAATGAAA               CAGGC TGTTG GCCTG               ATAACAGCTATACAG  73 47
        exlX 2032957 .. 2032976 -  -6.4  -5.17054   AGAACATTGAAAAAA            CAGCGG GAAAAGAT CCGCTG             TTTCGTATTTTTTAT  86 37
 JR441_10090 2029439 .. 2029474 -    -7  -4.39889   ACAACCACAGTAAAA   GTAGCCAACCCCCACC GAATAA GATGGGGGTTG-C-AC    GTAAGTAGCCTGTTT  79 39
 JR441_10070 2027871 .. 2027905 -   -10  -2.69906   TGAATAAAACAAATC     TGAGGAGAGCGAGA TTCATTG TCACGCTCTCCTCT     CTTAGCTTTATGGAT  74 355
 JR441_10055 NONE
 JR441_10050 2022605 .. 2022618 -  -4.5  -4.10429   AATGATTCCTCAAAA               CAGCA GAAA TGCCG                TCTTAAATTAATACT  61 28
 JR441_10045 2021259 .. 2021278 -  -5.7  -5.36364   TTAAAAAGATAAAAA            GCGACCCT CAAAC AGGG-CGC            TTTCTAATTAAGATG  86 33
 JR441_10025 2018590 .. 2018605 -    -9  -5.96894   ATTCAAATAAAAAAA              CCTGTC GAAA GACAGG               TTTTCATTTTTACGG 100 35
         rtp 2017917 .. 2017944 -  -6.9  -4.68539   ATGAAAAGCAGAAAA        CACCCGGTTCA TACTGC TGCGCCGGGTG         TTTGTTTCTATTAAA  81 36
        proC NONE
        proB 2015757 .. 2015791 -  -6.5  -5.84381   GTATCAATAAAAAAA    TGAACCCGA-GCTTCT ATAT AGAAGCTTCGGGTTTT     TTTCTGCAAATTAAT  93 36
        gltB NONE
        gltD 2008591 .. 2008618 -   -15  -5.83226   AATGGAATAAAAAAA        GAAACCGG-CTGG CAG CCAGACCGGTTTC        TCTTATATGATAATC 100 49
        yofA 2006457 .. 2006481 -  -7.9  -5.48163   AAATAAATTAAAAAA          CTGTACTCGCT TCA AATGAGTACAG          TTTTTTCATGCTGAT 100 155
 JR441_09975 2004248 .. 2004268 - -11.3  -5.82281   AAATATACAAAAAAA            GACACAATT TCA AATTGTGTC            CTAATCCTCATCCTT 100 26
 JR441_09970 NONE
 JR441_09965 2003241 .. 2003267 - -12.4  -4.55295   GTTTGCATAAAGAAA         GACAACAGGC GAAAAGT GCCTGTTGTC         TTTTTGTGAATATAA 100 39
 JR441_09955 2000934 .. 2000957 - -11.1  -5.99154   TATCAAATAAAAAAA          CACCGTTCA AACTTA TGAACGGTG           TGATTCGGAGGCTAT 100 37
 JR441_09950 NONE
        dacB 1998316 .. 1998338 - -10.7  -5.77988   ACAGACATAAAAAAA           CCTGTTTTC TCTTG GAAAACAGG           TCTGCCGCTATTATT 100 36
        ppsA 1990287 .. 1990302 -  -3.3  -3.92659   TTTTCAAAAGTTAAA              GATCT TTCACG AGATC               TTCGATGCTAGATAA  55 5
        ppsB NONE
        ppsC NONE
        ppsD 1964065 .. 1964077 -  -3.4  -4.21194   TTTCATTAGTGAAAA                CTGA GCATA TCAG                CAATCTCTTGCAGGG  59 3
        ppsE 1960174 .. 1960198 - -16.5  -4.58943   TTGATACAAAAAGAA          GCGGACAGAGA ATG CCTCTGTCCGC          GAATCCGCTCTATTG 100 35
 JR441_09915 1959675 .. 1959722 -  -3.1  -3.29252   TCTCACTAAATAAAC GA-AAAAAGTCCT-AAAGCATGTT GTG AGC-CGCTTTTAGGACTTTTTATC ATTCATCATGGTTTG  48 11
 JR441_09910 1958010 .. 1958028 -  -9.6  -5.25656   AAAATCACTAAAAAA             GACGACTT AGA AAGCCGTC             CTTCTCATTTCTTAT 100 37
 JR441_09895 NONE
 JR441_09890 NONE
 JR441_09885 NONE
 JR441_09880 NONE
 JR441_09875 NONE
 JR441_09870 NONE
 JR441_09865 1949682 .. 1949702 -  -9.7  -4.27886   TTGTAAATATATAAA            GGAGCGC TTTTTTT GCGCTCC            TAAGTTCTTGCTTTT  86 39
        nrnB 1948307 .. 1948341 -   -13  -2.82193   ACGATAGCTAGCAGA     TATGCATAGGGGTG ACTGACG CTCCCCTATGCATA     TTTTTTTACTTCCGA  86 31
        xynD NONE
        xynC 1942668 .. 1942691 - -11.8  -5.92399   CAACAAAATAAAAAA          GCGATTTCCC AATC GGAAAATCGC           CAATTCAGACACTCT 100 81
 JR441_09815 1937883 .. 1937905 - -16.4  -5.70522   AACAATAATAAAAAA           CCCGCTCATA CTA TATGAGCGGG           TTTCGTTTGTTTTTT 100 193
        plsY 1931843 .. 1931858 -  -3.3  -3.26722   GTCATATTCATAACA              GAACA CCCCTT TGTTC               TTCATTTGAATTTTC  47 93
 JR441_09790 1931526 .. 1931546 - -14.1  -5.42259   TCATTTGTAAAAAAA            GAACGCACA TGA TGTGCGTTC            TTTTTTATTGGTATT 100 30
        sspO 1926292 .. 1926304 -  -4.1   -2.8272   TCATAAAATGAGAAC                CTCCT TAA AAGAG                TTCGGTGTTATTGAT  46 33
 JR441_09745 1926112 .. 1926127 -  -4.7  -5.66684   GAACGCATAAAAAAA              CAGAC ACTAAG GTCTG               CTTTTCTTACATATC  88 32
        cotM 1925622 .. 1925651 -  -9.5  -5.81412   TGGACGGAAAAAAAA       GTCACTTTCAT AATAGGGG ATGAAAGTGAC        TTTTTATGTTTAGCT 100 35
 JR441_09735 1924972 .. 1924993 -  -8.8  -5.33921   AAATGAATTAAAAAA           CCTTTCCT CTTGTC AGGAAAGG            TTTTTTATTTGAGAA 100 30
        ynzD 1922812 .. 1922837 -  -9.2  -4.39828   AACATGGTTATAAAA         TAAAAAACCC TTATAC GGGTTTTTTA          TTTTGCAATCATTCA  91 34
        lexA 1917588 .. 1917613 - -12.6  -4.44667   TTTTTGAACAACAAA         CCCCCTCTCC GTAAAG GAAGAGGGGG          TTATTTTATGCATCT 100 55
 JR441_09670 1915993 .. 1916017 -  -9.3  -4.67755   ATAGCTACTGAAAAA          TAGGAGGCGAT AAG ACAGCCTCCTA          TTCCTTATGCTTCTC  91 23
 JR441_09615 1906262 .. 1906279 -  -9.9  -5.93252   GGGAAAAATAAAAAA             GAGAGAG ATAC CTCTCTC              TTTTTTATTCTTCGA 100 30
       tatAC 1905345 .. 1905365 -    -9  -5.06411   ACAAAACAAAATAAA            GAGCCGAT TTTTC ATCGGCCC            AAACGATTTATCCTA 100 38
 JR441_09600 1904931 .. 1904946 - -11.8  -4.49311   CATAAACAAAAAAGA              CCCGGC AATA GCCGGG               GGAAAGTAAAAACGA  95 58
 JR441_09595 1904322 .. 1904333 -  -4.4   -2.6072   GAGTGAAGTAAGGGA                CGAA ACGC TTCG                 CCAATCTGAAAGCTA  47 69
 JR441_09590 1903461 .. 1903480 - -10.7  -4.59117   AAATTAATTATAAAA            CCGCCAG ACAATG CTGGCGG             CTTTTTGCTGCTTCG  95 42
 JR441_09585 1902827 .. 1902847 -  -8.4  -5.37043   ATTTTATATAAAAAA            GATTAGCT ATAAA AGCTAATC            TTTTTTATTAAGAAG 100 20
        cotU 1899413 .. 1899435 -    -4  -5.38321   AAATATCATAAAAAA           GCCCCCGG TATGTCG CCGGGGAA           TAAATAGACGTTTAA  78 46
         alr 1896234 .. 1896260 - -16.8    -5.252   TAGTTTCAGAAAAAA         CAAAATCCCTCT GGT AGAGGGATTTTG         ATTCAGCATTTTAAG 100 46
        yncB 1893535 .. 1893558 -   -11  -4.18674   TTTACACACAAATAA          CCCCCTCACA TTGA CGTGAAGGGG           TGTTTTTTATTGTTA  90 185
 JR441_09520 1888806 .. 1888825 - -10.8   -5.4833   CTATTGAATAAAAAA            GCTCATCT TTAA AGATGAGC             TGTACATTCCATAAA 100 43
 JR441_09460 NONE
 JR441_09455 NONE
 JR441_09450 NONE
 JR441_09445 1874798 .. 1874824 -   -11   -4.0648   AAGCATATGAAACAA         GAAACCTACTTT TAA ACAGTAGGTTTC         TTTGTCGTGGTATTG  89 49
        cwlC 1862039 .. 1862065 -  -7.9   -5.7946   TCTTGAATAAAAAAA         CCCGGTTTCTC GTGAT GAGGAGCCGGG         TTTTTTTATGAGACG 100 57
 JR441_09340 1854769 .. 1854787 -   -11  -4.72846   TCACACACTTAAAAA             GACCCCTT TTT AAGGGGCC             TTTTGCGTTTAATAA 100 34
        ebrA NONE
        ebrB 1853968 .. 1853992 - -11.5  -5.14682   GGAGAATAAAGAAAA          CAGACGGTC ACTCACA GACCGTCTG          TTTTTTATCTTCAGC 100 8
        aprX 1850623 .. 1850652 - -10.1  -4.57516   ATATTCAAACCAAAA       CCGGCAGTTCTGCT GAG AG-AGAATTGCCGG       CTTTTGATGATGTTT  91 39
 JR441_09305 NONE
 JR441_09300 1849237 .. 1849270 - -18.3  -4.03413   ACGGCTCGATATAAA     GCAGCGCCTTTGAAC GAAA GCTCAAAGGCGCTAC      GCTGTATTATTTTGA 100 53
 JR441_09295 1847817 .. 1847840 - -14.6  -4.51238   CTGAGAAAACACAAA          CGCCCCCTCT TTTA AAAGGGGGCG           TTTTGAATGTTATTT 100 35
 JR441_09210 1770466 .. 1770489 - -12.4  -5.52347   AACAAAACCAAAAAA          GGCCCTTTCC ACTG GGGAAGGGCC           TTTTTCATCATGTTA 100 38
 JR441_09205 1769376 .. 1769401 -  -6.2  -4.12225   AACGACGAAATCAAA         GCGCTTCTGGA CGACC TCC-GAAGCAC         ATCAGACCCATTTAC  68 516
 JR441_08660 1660404 .. 1660423 -  -7.8  -5.15167   GACGATTAAGAAAAA            GGCCTCAA CATC TTGGGGCC             TTTTCTTTTTTATCT  93 35
 JR441_08590 1644833 .. 1644857 - -13.5  -5.00895   TTCACCACATAAAAA          CGCCTGCCACA TAT CGGGGCAGGCG          TTCATTTTGTTATAC 100 35
        rqcH 1625357 .. 1625384 - -12.8  -4.73677   GTGAGAAGAAAGAAA        TAAGCCAGAGCA CAAA TGCTCTGGCTTT         TCTTTATGCGGCTCA 100 38
 JR441_08230 1565574 .. 1565592 -  -3.1   -4.4009   TCGTATGTGAGAAAA             CAATACC AGTCA GGTATAG             AGCTTGCAAAAAAGC  62 468
 JR441_08210 NONE
 JR441_08205 1563051 .. 1563069 - -13.2  -4.35926   AGCTGAAAGCGAAAA             GCACCTGA TTC TCAGGTGC             TTTTTCTATACATTT 100 31
       spoVV 1559826 .. 1559847 -  -5.9  -3.61591   CAAAAATTCAGACAA           GGATGAG GGTTTTGA CTCATCC            TTTTTTTGTTCCGTT  61 20
 JR441_08145 1554586 .. 1554608 -  -9.2  -4.52047   GACGATATCATAAAA           GGTACAGC GAAATAT GCTGTACC           TTTTCGTTACATTTG  91 32
        ctaA 1547268 .. 1547293 - -13.4  -5.48787   ACAAGACATAAAAAA         GACCAAAGCC GCCTAA GGCTTTGGTC          TTGAGTCTTTATGAT 100 34
 JR441_08085 NONE
 JR441_08075 1537934 .. 1537954 -  -5.4   -5.4593   CCAAAATAAGAAAAA            GCTAAAGC GCAAG GCTATAGC            TTAGTCATTGTTGTT  88 26
 JR441_08070 1537603 .. 1537637 - -17.4  -3.06073   GACAGTCTGCAAAAT     CATAAAAGACTCAGCT GAA AGCTGAGTCTTTTTTG     TGTTCTGTATGGTTA 100 51
 JR441_08055 1535039 .. 1535057 -  -7.4  -5.13137   TAAAGAAATGAAAAA             CACCGC TTTCTTT GCGGTG             TTTTTTGATTACAAT  90 62
 JR441_08050 1534176 .. 1534200 - -12.2  -5.71712   GCTGATATAAAAAAA         GCGCTTGTCCG ATTC CGG-CAAGCGC          TTTTTTACATTAAGC 100 35
        nprE 1529281 .. 1529298 - -11.3  -6.23209   GTAACGAAAAAAAAA             GCCTGAG ATTT CTCAGGC              TTTTTCTAATATTAC 100 37
 JR441_08020 1528003 .. 1528023 - -14.1  -5.06414   CGGGTTCAATAAAAA            GCCTCTCAA ACA TTGAGAGGC            TTCTGATAATTTGAA 100 43
 JR441_08000 1525480 .. 1525501 -   -13  -5.12971   AAGATGTAAGAAAAA           GAGCCGGG GGATAT CCCGGCTC            TTTTTTATGCTTGTG 100 30
        speA 1523517 .. 1523539 - -17.8  -5.63374   TGAAGAGTAAAAAAA           GCATGCGGCT TAA AGCCGCATGC           TTTTTATTTTTTATT 100 36
         slp 1522571 .. 1522594 - -13.2   -4.8048   TTTTCATATCAAAAA          CAGCCCTCGCT CAA AGCG-GGGCTG          TTTTTTTATTTTGAC 100 31
 JR441_07950 1516092 .. 1516115 - -12.5  -3.61468   GTGCAACGAAACGAA          TGACCAGCC GTATAT GGCTGGTCA           ATTTCATGCTGTGTG  95 42
 JR441_07945 1515438 .. 1515458 - -11.1   -4.8743   TTTAAAATAAAGAAA            TGGCTGGCA TTG TGCCAGCCG            TTTTTTCTTTTAGCG 100 35
       rnpZA NONE
 JR441_07930 1512361 .. 1512385 - -16.5  -5.08601   TCACTGCAATAAAAA          GAGGCACTCCC TTA GGGAATGCCTC          TTTTTTTAAACCTCC 100 31
       mreBH 1505812 .. 1505824 -  -3.4  -4.67552   GTGAGGAAAAAAGAA                GCAA GAAAT TTGC                CGCGTGTGAGAATTT  64 53
 JR441_07895 1505586 .. 1505606 - -11.9  -4.81249   GCCCAAAGTGAAAAA            CCCAAAACG ACA CGTCTTGGG            TTTTTCAATATTATG 100 36
 JR441_07890 1504248 .. 1504265 -  -8.4  -5.75538   GCGAAAAAATAAAAA             GGAGGC GGAAAA GCCTCC              TTTTATTTACTTAAA 100 36
 JR441_07875 1501173 .. 1501200 -   -12  -5.67711   CAAACAAAATAAAAA        CGCCTTGCTGGCC TTT GGACAGCA-GGCG        TTTTTATTTTGAAAA 100 29
       cse15 1483662 .. 1483683 -  -9.5  -5.48623   AAATATAAAGAAAAA           CTGCTTG-GC ATC GCTCAAGCAG           TTTTTTTATTGAGGT 100 31
        mscT 1480483 .. 1480501 - -10.3   -5.1244   TCAGTAATATAAAAA             CCGAAGC AAAAA GCTTCGG             TTCTTTTATTTATTC 100 35
 JR441_07700 NONE
 JR441_07695 NONE
 JR441_07690 1467779 .. 1467806 - -12.2  -4.75174   TATTGAATGTAAAAA        TGCGCTTTTTTC TAAG AAAAAAAGCGCA         TTTTTAACCTGCATT 100 39
 JR441_07685 1467184 .. 1467231 - -13.8  -3.06915   ACGTATGTTATTGAA TAAATAAAAACAGCCGTTGCC AGAAAGA GGC-ACGGCTGTTTTTATTTT AAAAGTAACTCTCGC 100 24
 JR441_07675 1465841 .. 1465868 -  -3.5  -5.60993   CTTTTCAGAAAAAAA        GAAGACAACCA GCGATT TGATTGTCTTT         ATTGTATCATGTTCT  84 67
 JR441_07670 1464520 .. 1464539 -  -9.3  -5.86609   CCAAAAAAATAAAAA            CAACGGC TTAAAC GCCGTTG             TTTATCGTCTGCATT 100 13
 JR441_07655 1459266 .. 1459290 -   -13  -5.95539   GGTGAAATAAAAAAA          GATTGCCTGT ACGAA ACAGGCAATC          TTTTTTTATTATTTT 100 34
 JR441_07640 1455450 .. 1455473 -   -11  -3.66646   AATATTTCACTTAAA          CGGGCTGTTG TGAT CAACAGCTCG           CTTTTTTATAAAAAG  88 15
 JR441_07595 1445937 .. 1445960 - -16.8  -5.08255   ACTCCTAAAATAAAA          CCAGCAGCCT AATC AGGCTGCTGG           CTTTTTATGTATCAA 100 37
 JR441_07565 1440214 .. 1440229 - -10.4  -5.08824   TTTTTATGTAAAAAA              GCTGCC GGCC GGCAGC               TTTTGAGAAAGCGAA 100 108
 JR441_07535 NONE
 JR441_07530 1434562 .. 1434584 -  -3.5  -5.64421   ATCCGAAAGAAAAAA           TGCCTAT CTAGAGATC ATAGGCA           TTAAATATTATTATC  84 26
        clpE 1428081 .. 1428103 - -14.2  -6.04378   AAAGTATAAAAAAAA           GCGGCTTCCT AAA AGGAAACCGC           TGATTGTTATTTCGC 100 32
        motA NONE
        motB 1426122 .. 1426148 -    -8  -5.71638   TAATAAGTAAAAAAA         GGAAGCCTGATA TGT CACAAGGCTTCC         TTTTTTGCTATTTTT 100 33
        kinD 1423943 .. 1423965 - -13.4  -5.49569   CACGAAGATAAAAAA           CCCTCCTGAC ATG GTCAGGGGGG           TTATGAAGCGGATAC 100 26
 JR441_07465 1422611 .. 1422631 - -16.9   -2.9913   AATAAGCATGAGATA            GCCCCGTTC ATC GAACGGGGC            TTTTTATATTTATTG 100 35
 JR441_07435 1416964 .. 1416988 - -18.7  -5.03314   TGTAGCCGTAAAAAA          GCCTCCTTCTC AGA GAGAAGGAGGC          TTAACATCTATGTCC 100 284
 JR441_07430 NONE
        mtnA 1414613 .. 1414648 - -10.5  -6.11392   AAAGAAACAAAAAAA    CCGCT-GACTCGGCTC CAAAT GAGCAAAGTCCAGCGG    TTTTTTAATGCACCT 100 30
 JR441_07405 1410382 .. 1410412 - -12.6  -5.70522   AACAACAATAAAAAA       GACCTCTTAGGCGG CGT CCGCTTAAGAGGTG       CTTTTTCTATTTTAA 100 32
        htpK 1406578 .. 1406597 - -12.8  -5.35224   TGGAGAAAAATAAAA            CCCCGGCC TCTG AGCCGGGG             TGGCGCAGACTATAG 100 35
 JR441_07375 1406247 .. 1406268 - -12.3  -3.49107   AGCTAAAAATGAAGA           TTCGCCGAG TGCC CCCGGCGAA            TAAAGACCTGAATTT  90 39
 JR441_07345 NONE
 JR441_07340 1396986 .. 1397008 - -12.1  -3.81539   AGTTAAACACGGAAA           GAGCTGACT TCATT AGTCAGCTC           TTTTTCTTCAACTGA  93 19
 JR441_07325 1393218 .. 1393233 -  -3.2  -5.86965   ACCTATCAAAAAAAA              GACTGA TGCC TCGGTC               AGCACAGTCTTTTTT  88 43
 JR441_07315 1390961 .. 1390983 -    -2  -4.83169   ATTTTTTTATAAAAA           TCCTATATAC GAG GTAGATATGA           TGAGATTATCGTTTA  66 492
        tnrA 1389862 .. 1389885 -  -8.8  -4.84529   TTATAAACGTAAAAA          GTCCGTCTCA ACTG CGAGCCGGAC           TTTTATTATTTAACG 100 35
        thiU NONE
 JR441_07255 NONE
 JR441_07250 NONE
        thiX 1380526 .. 1380546 - -14.1  -5.84381   TCATCAATAAAAAAA            TCCGCTATC TGT GATAGCGGA            TTTTTTATGATGCGA 100 30
         isp 1378169 .. 1378194 - -14.1  -5.18726   TTCTCACAACAAAAA         GCCTCTTTCCC ATGA GAGAAAGAGGC          TTTTCTACGTAAAAC 100 336
        metE 1375770 .. 1375790 - -11.2  -5.74122   TATTATAGAAAAAAA            CCATCTGC CAAAT GCAGATGG            TTTTTTCAAATTATA 100 36
        guaD 1375131 .. 1375155 -  -9.3  -4.15703   TTGGAGAAATAACAA          GGACCAGGC CGCGCAT GCCTGATCC          TTTTAATATTCTTTC  85 28
        ohrR 1373892 .. 1373916 - -14.4  -5.47159   CTGAATAAATAAAAA          GAGGATGCCT GTACA AGGCATCCTC          AATTTTTTTGATGAA 100 24
 JR441_07150 NONE
         pgl 1362311 .. 1362338 -  -9.2   -5.4659   TAAGATAAATAAAAA        GAGTGGCTCC TTTTTACT AGAGCCACTC         CATTTGTTTATACTT 100 33
        htrA 1350361 .. 1350388 - -15.6  -5.10461   TTTATCTAATAAAAA        GCCTCAGACCGC TTTT ACGGCCTGAGGC         ATTATGTCTTACGAA 100 34
 JR441_07085 1349888 .. 1349912 - -21.5  -3.69354   TGTCATAACCTCAAA          CCCCCTGTCCG TAA CGGACAGGGGG          TTTTTATGCTCTGAG 100 158
        steT 1343829 .. 1343851 - -13.5  -5.14563   TGTTTCACCAAAAAA           CGGTTCCCT AAACA AGGGAACCG           TTTTATCAGCTTGCT 100 31
 JR441_07060 NONE
 JR441_07055 1341922 .. 1341942 -    -9  -5.52384   GTTCGATCAAAAAAA            CCGCTCCT TTGAC AGAAGCGG            TGTGACATTAAAATA 100 33
     spoIISA NONE
     spoIISB 1340888 .. 1340912 -  -7.9   -4.0219   TAAGAAAAGGAATAA          GGACAAGAG CTGTTTT CCCTTGTCC          TTTTAGTGTGATCAT  76 37
     spoIISC 1340674 .. 1340696 -  -5.7   -5.1244   TGATGAATATAAAAA          GCGACATATT GTTT AAT-TGTCGC           TTTTTTTTGTTCGTT  81 15
 JR441_06850 1311574 .. 1311586 -  -2.6   -5.0065   TAGCGAGAAAGAAAA                GCCC GTATA GGAC                TGGAAGGTAGTGTAG  68 126
 JR441_06845 1310642 .. 1310659 -  -4.1  -3.61902   CTGGAGGAGAGAGAA             CGGGA TATTGTCG TCCCG              ACGACGTTTCCGCGT  53 294
 JR441_06830 1308848 .. 1308883 - -16.4  -3.67068   AGGAAAAGCTGTAAA    TGAAAAGACGGAAGCT GTGA AGCTTCCGTCTTTTTA     TCTTACATACAAACT 100 28
 JR441_06820 1307498 .. 1307511 -  -8.1  -5.28778   ATGATGCATAAAAAA               GACCC TTAG GGGTC                TTTTTTATTTCTTCA 100 30
 JR441_06800 1304159 .. 1304178 -  -6.5  -5.97575   AAGGCACAAAAAAAA            GATACCT CTTAAC AGGTATC             TTTTTTCTTGTTTAC 100 42
 JR441_06795 1303176 .. 1303198 -  -9.2  -4.95547   GCTATAATAAGAAAA           GGCTATCC TTCAAGC GGATAGCC           TTCTTCATTAAATCA 100 33
 JR441_06725 1286944 .. 1286969 -  -8.3  -4.59342   GGTAGCACAAATAAA         GGAGAACAGGC TTTC ACCCATTCTCC          TGCAGATGCTACGCA  88 34
 JR441_06720 1286097 .. 1286110 -  -5.3  -4.24623   TTAAAGAGAGAGAAA               GGTAA TCCA TTACC                GAGTGCCTCCCTTCA  67 21
        fetB 1285321 .. 1285344 - -11.8  -5.03945   TAACAAGTACAAAAA          GCCGCTTTTCC CTC GGAAA-GCGGC          TTTTGTCTGTCATTC 100 35
 JR441_06705 1284105 .. 1284125 - -12.7  -5.36364   GTAAAAACATAAAAA            CCGAAATCA ATT TGATTTCGG            TTTTCTGTTTAAATA 100 34
 JR441_06690 1281008 .. 1281029 - -13.1  -5.15634   TATTCGACTAAAAAA           GAAAGAGCC TATG GGCTCTTTC            TTTTTTATAATGTAA 100 30
 JR441_06665 1275204 .. 1275219 - -10.4  -5.14563   TTGTCCACTAAAAAA              GCGGCT GAAT AGCCGC               ATAGGGTGTTTATTT 100 35
 JR441_06660 1274727 .. 1274745 -  -3.7  -5.72207   TCCAAATGAAAAAAA             GCGTCAC ATACA GCGGCGC             TTTTTGATTCCCAAA  85 10
 JR441_06650 NONE
 JR441_06645 1272890 .. 1272919 - -13.7  -3.20126   AAGCGAAATAAATTA       CAAAAGGCTGTCC GTAC GGACAGCCTTTTT        TCTATTTAATAAGAG 100 31
        cotT 1270943 .. 1270963 -  -4.7  -6.09196   TTTAAAACAAAAAAA           TGGGGAGC TGGACT GC-CCCCA            TTTTGATATGCGGCG  95 42
        cyoE 1269838 .. 1269859 -  -4.4  -5.63517   TTTCCAAACAAAAAA           GAGTCACA TTAATG TGTGGCTC            TTTTTGCATCATCTG  86 34
 JR441_06625 NONE
 JR441_06620 1268578 .. 1268598 -  -4.7  -4.99134   AGGGGAAACGAAAAA            GCTTAGTCA TGT CGATTAAGC            TTTTTCCGTATCTCT  76 20
 JR441_06610 1267294 .. 1267321 -    -2  -2.98105   ATAACATATAACAAT        TTTCTCTGATAC CTTG GCAGTAGAGAAA         GATGAAGAAATTGAG  42 165
 JR441_06605 1266697 .. 1266723 - -16.7  -3.89435   GGTAAATAATCCAAA         CAAACGCAGGC GCAGT GCCTGCGTTTG         TAATTAAGGACTCTA 100 38
 JR441_06580 1260048 .. 1260090 - -14.5  -3.76839   GAAGCGCAATTGAAA TAAAATAAGGTCCCTTCTCT TTTT AGAGG-GGGACCTTATTTTA TTCATGCATGTTTTG 100 68
 JR441_06545 NONE
 JR441_06540 1251837 .. 1251859 - -12.1  -3.97437   ACTAAAATAAGAGAA           TCCCTTCTC GTTAT GAGAAGGGA           TTTATCCGTTTATTC  93 35
 JR441_06275 1216316 .. 1216333 -  -5.5   -3.5882   GATACGATTGGGAAA             CCAGTGG TACA CCATTGG              GAGACGGGCATTTCT  58 217
 JR441_06270 1215285 .. 1215301 -  -2.2  -4.87803   TAGTGTGAAAGAAAA              GCCC AGGGAAAAA GGGC              CATTATAAATTAAGT  64 28
 JR441_06265 NONE
 JR441_06260 1213419 .. 1213435 - -12.3  -3.65313   GAATCATAGCTTAAA              CCCTTGC ATA GCAAGGG              TTTTTTACTTTACTT  93 114
 JR441_06250 1211968 .. 1211985 -  -2.7  -3.51234   AGGGAAATGCAAATA             TCCTTTT TATA AGAAGGA              AGAAAACCAATTTCC  48 14
 JR441_06245 1211331 .. 1211353 - -14.9  -5.00616   CGGTTCGTTAAAAAA           GAAGCCGGG GATGG CCCGGCTTC           TTTTATTATTGTTCG 100 31
 JR441_06230 NONE
 JR441_06225 NONE
 JR441_06220 1206957 .. 1206978 - -13.1  -4.76041   TATATGCAGTAAAAA           TCCGGATCT CAAA AGATCCGGA            TGCGTTCAGTCCTTC 100 31
 JR441_06210 1204238 .. 1204257 -   -15   -4.8048   TTTTTACAGTAAAAA            CCCGGCAG TAAT CTGCCGGG             CTGTTAATGATGCAA 100 29
 JR441_06185 NONE
 JR441_06180 NONE
 JR441_06175 1201183 .. 1201203 -  -8.3   -5.4593   GGAAAATAAGAAAAA            GCAGAGC GTTTTTA GCTCTGC            TTTTAGGTTCTAGAG 100 35
        cotY NONE
        cotZ 1199961 .. 1199988 - -13.6  -2.98823   GCTTTTTTACATAGA        GAAAAGCCTGCA GGCC TGCAAGCTTTTC         CAGCTTATGATTAAT 100 36
        prpE 1189913 .. 1189945 - -15.1  -2.81936   ATATGAGAAAACTGA      TAAAAGGAGAGAATC ATT GATTCTCTCCTTTTT      TATATGGGGCGAAAT 100 25
 JR441_06085 NONE
        cwlQ 1185698 .. 1185720 -  -6.3  -5.41143   CACTCCGCAAAAAAA           CCAGAGG GAAAGAGCA CCTCTGG           TTACGCGTAATAAGC  89 26
 JR441_06075 NONE
        spxH 1184145 .. 1184174 -  -7.1    -5.626   TACGGCATAAAAAAA       CAGCCTCAAGCAT ATGC ACGCCTGCGGCTA        TTTTTCACATGATTG 100 23
 JR441_06065 1183662 .. 1183686 - -12.9  -3.93166   GTCTTAAAAAAGTAA          GCCTGTGCG GAAATGA CGCACAGGC          TTTTTTAAAACCCTT  95 30
 JR441_06050 1179857 .. 1179878 -  -2.9   -4.3898   ATCATCGTCACAAAA           GCCCAGCTT TCCA AAGACGGAC            AAAAGCTCGAACTGC  60 424
 JR441_06035 1178669 .. 1178690 - -13.1  -4.30844   ATCGTATCATCAAAA           GAAGGCTGA GTCA TCAGCCTTC            TTTTATTTTTCAACC 100 28
        trpS 1168644 .. 1168663 - -12.2  -5.95166   GTCAACTAAAAAAAA            CCGCTCTT TGCA AAGAGCGG             TTTTTTGATTAGCGT 100 34
        yjzB 1158353 .. 1158372 - -10.8  -4.14147   ACAGAATAAGAAGAA            GCCACTTT TTTG AAAGTGGC             TTTTCACATGATTTT  89 29
 JR441_05915 1155255 .. 1155277 - -10.7   -5.1861   GTGACCACTAAAAAA           CCCAAAACA ATAAA TGTTTTGGG           TTTTTTGACTTTTTA 100 38
 JR441_05845 NONE
 JR441_05840 NONE
 JR441_05835 1140565 .. 1140591 - -15.2   -4.0098   TTTGAAGTCAAATAA         GAGGCTATGGCG AGT CGCCATAGCCTT         TTTTTATTGCAGTTT 100 29
 JR441_05820 1138230 .. 1138253 -  -6.1  -5.34309   ATGAGCAAACAAAAA          CAGTCAGGAC ACAGA GTC-TGACTG          TTTTTGTTTGCTCAT  89 37
 JR441_05795 NONE
 JR441_05790 NONE
 JR441_05785 1132970 .. 1133002 - -15.6  -4.37971   AAAATAGCATGAAAA     CGGCTCGC-CTGCAG CAGA CTGCGGAGCGAGCCG      TTTTTTTATGTCTAG 100 37
 JR441_05775 1131212 .. 1131230 -  -8.2  -6.04953   AGAGAAATAAAAAAA             GTCCTCTT AAG AAGAAGAC             TTTGTCAGTGATTTT 100 270
 JR441_05770 1129288 .. 1129312 -  -9.3  -4.57341   AATCCTGTTGAAAAA          GACCGCCCGAT TGG ATCAGACAGTC          TTTAAAGGGATTAAT  91 36
 JR441_05765 NONE
 JR441_05760 1127894 .. 1127916 -  -9.9  -5.24989   TCAGACAGCAAAAAA           CCGAACAGA AGATA CCTGTTCGG           GAAAAAAGAGGGTTA 100 38
 JR441_05755 NONE
 JR441_05750 1125416 .. 1125440 - -10.7   -4.8743   CTCAAAATAAAGAAA          TGGCCCAGCTT AAT AGGCTGAGCCA          TCCCACTTGTAGCGA 100 10
 JR441_05745 1124248 .. 1124276 -  -3.1  -4.59342   CCGATGACAAATAAA        GAGAAAGCGGC TTACATT GCCGATTTTTC        TGATGAATTTCTTGT  66 449
 JR441_05730 NONE
         sat NONE
        cysC 1120421 .. 1120436 -  -6.8  -4.52415   ACTCATAAGAATAAA              CCCGAC ATTG ATCGGG               TTTTTTATATAATTC  76 30
 JR441_05710 1118469 .. 1118479 -  -2.4  -4.46233   GGAAGCTTAAAGAAA                 GGAG AGA CGCC                 GCCGTTCATTTTCTC  61 309
 JR441_05700 1116584 .. 1116594 -  -3.2  -4.19238   CCTTCAATTGCAAAA                 GAGT GAC ACCC                 CAAAATATCCTGCCG  59 3
 JR441_05695 1116002 .. 1116023 -    -8  -5.60993   CTTTCCACAAAAAAA           GCAAGGAC ATTTTA GCCCTTGC            TTTCTCTTTTCTCAT 100 15
 JR441_05675 1111320 .. 1111344 - -10.7   -5.1287   CTGATATCTAAAAAA          CACCCGGCC TTGATTG AGCCGGGTG          TTACGCCATACCTTT 100 26
 JR441_05665 1109702 .. 1109738 -  -6.1  -4.11346   AGATTTAAATAAGAA   GGATAGAT-GAGCA GGGAAATATA TGCTCTATCTATCC    TTTTTTGTACAACAG  67 67
 JR441_05655 1107056 .. 1107074 - -11.7  -4.97312   AAAAGTAACCAAAAA             GCGGTGC TCGAT GCACCGC             TTTTTTATTTGCGCC 100 30
 JR441_05635 1101701 .. 1101717 -  -2.9  -5.16237   AATTTGACTAAAAAA              GCGACAA TTT TTGCTGC              GGCCTTTTTTAATGG  70 49
        yisI 1101215 .. 1101246 -    -8  -2.70354   TTGGGTATAAATTGA      GCGGAAATGCGGC GAAGGAT GCCGC-TATCCGC      CTATGGTGATTTTTG  63 204
 JR441_05625 NONE
       gerPB 1100537 .. 1100550 -  -3.7  -3.24747   CTTTCATATGATTAA               CGGCC AGGA GGCTG                GAGCGGGACCAATGA  48 8
 JR441_05615 NONE
       gerPD NONE
 JR441_05605 1099291 .. 1099305 -  -2.1  -3.86194   AATTGCTGGCATAAA               CGACA CCCTT TATCG               AAGTCTCTGTTTATT  51 39
 JR441_05600 1099040 .. 1099066 -  -8.8  -4.88129   AAAAATGACTAAAAA        GCAGCC-CTCT CTTTGC AGAGCGGCTGC         TTTTATCCGTTTCCA 100 28
 JR441_05570 1086256 .. 1086270 -  -5.7  -2.93382   GGGGATATGTACATA               TACCC TGAAC GGGTA               TATCTAACGTTCCAT  52 29
 JR441_05565 1085804 .. 1085825 - -10.2  -5.27335   CTGTCCAAATAAAAA           GAGGGTTC TTTTTT GAACCCTC            TTTTTTACGCTGCCA 100 30
 JR441_05555 NONE
 JR441_05550 1081318 .. 1081350 - -12.3  -3.49951   TATATCTTTATATAA      GAAAAAGAGGTTA TTCATTT TAACCTCTTTTTC      AATCGTAAGTCGTCA  90 168
        ntdA NONE
        ntdB NONE
        ntdC 1076927 .. 1076946 -  -7.9   -4.8048   CCCCTATATGAAAAA            GCAGGAA AGTAAA TTCCTGC             TTTTTTAGTAACTTC  88 54
        glcP 1075557 .. 1075574 - -11.3  -5.63517   TTTTTAAATAAAAAA             CACGCAC TGCG GTGCGTG              TTTTTCGCTTTTTTC 100 149
 JR441_05500 NONE
 JR441_05495 NONE
 JR441_05490 1069709 .. 1069746 - -15.3  -3.66178   CCTGTGAACGGTAAA   TAAGAAAAAGCAATCTGG TGT CCAGATTGCTTTTT-TTA   TGCTTAGGCCGCCTG 100 29
 JR441_05480 1068283 .. 1068315 -   -12  -4.08042   GGTATTAGAAAAATA      GGAAGGAGCTGACC GAACA GGGCAGCTCCTTTC      ATAAAGCTATGCCGT  93 32
 JR441_05470 1067150 .. 1067170 - -14.1  -5.21236   AACGGATAATAAAAA            GCCAATCCT TGA AGGATTGGC            TTATTCGCTCTGCTT 100 26
 JR441_05460 1064624 .. 1064643 - -10.8  -4.69464   AAAATATTTGAAAAA            CCGTTCAT TAAA ATGAACGG             TTTAATCGAGATCTA  95 27
       hemAT 1063178 .. 1063197 -  -4.2  -5.54192   ATGAACGCAAAAAAA            CCGGCC GTATGGCA GACCGG             TTTTTGATGGTTATT  84 36
 JR441_05450 NONE
 JR441_05445 NONE
 JR441_05440 NONE
        phoE 1059295 .. 1059322 - -11.4  -5.09762   TGCTAAGAAATAAAA        GAAAAGACAGGC AAAC GCCTGTCTTTTT         CTTATTTGATAAAGC 100 27
        aprE 1054976 .. 1055001 -  -9.1  -5.38054   GCTGACAAATAAAAA         GAAGCAGGT ATGGAGGA ACCTGCTTC          TTTTTACTATTATTG 100 35
 JR441_05405 1053112 .. 1053144 -   -18  -4.63218   TTTGCCCCAATAAAA      TGAAAAAGCGAAGC GGTTA GCTTCGCTTTTTCA      TTTTCAATCCTTTGC 100 29
 JR441_05380 1048670 .. 1048700 - -16.3  -4.63089   TATGTGAAAAAATAA       GAAAATCCCACGC GTAAG GCGCGGGATTTTC       GCTCATTACAAATCG 100 31
        gltT 1047114 .. 1047139 - -18.3  -5.32699   TTAAAGATTAAAAAA         GCCTGCGGGGC AAGA ACCCCGCAGGC          TTTTCATTAACCAGA 100 32
       fabHB 1043322 .. 1043347 - -13.5  -5.38054   CTTCATAAAGAAAAA         GAACTTGTTTC CTTG GAAACAAGTTC          TTTTTTTGTTACATT 100 34
        hmoB 1033794 .. 1033814 -   -14  -4.43307   CTCCCAATAAAATAA            GCTGCCGG ACATG CCGGCAGC            TATTCGACAGCGAAA 100 25
 JR441_05310 NONE
 JR441_05305 1031971 .. 1031983 -  -2.7  -2.74094   TTGTATAGAAAAAGT                CTGAA TAT TTCAA                CTCGTGCTGTTTTAA  41 37
        sndC 1030702 .. 1030727 - -11.9  -4.12738   GGATATTAAAGGAAA         CAGCCGGAG AATAAACA CTCCGGCTG          TTTTTTTATAGCTGA  93 31
 JR441_05280 1027088 .. 1027111 -  -8.2  -5.18371   GTTCACAAAATAAAA          TAACCTCATC TTAT GATGAGGCCA           GGCGTTTTGCGATAG 100 12
        serC NONE
        trpP 1025195 .. 1025216 - -12.3  -5.40072   CTCTGTTCAAAAAAA           CCTCTCCCG GAAG CGGAAGAGG            TTTTGTGTGACAATT 100 39
 JR441_05260 1024434 .. 1024456 -  -6.3  -5.75342   TTCGGCCAAAAAAAA          TACGGGTCCA ATTT TGG-CCCGCA           TTTTTTTCTTTTGAA  91 48
 JR441_05255 1023535 .. 1023571 -    -3   -5.0916   CTGGCAACACAAAAA   GCGCAAGGATTTGTAAC CTTT GATA-AGCTCCTTGCGC    TTTTTGCCGGACAGC  73 144
 JR441_05245 1022522 .. 1022534 -  -6.9   -2.5763   ATAGAATAAAATGAT                GGGAG ATT CCCCC                TCTCTCTGAACTGTC  60 117
 JR441_05240 1022288 .. 1022332 -   -16  -3.39895   GGCTGTACTAATCAA CATAAAAAAGCATAGCTGCT TAATC AGCAGCTATGCTTTCTTTCG TATTTACACTGTAAA 100 29
 JR441_05225 1020916 .. 1020943 - -16.4    -5.626   CATCGCATAAAAAAA        GCTGTGC-GGCTC AAT GAGCCTGCACAGC        TTTTTTATTATTTAG 100 33
 JR441_05190 1012570 .. 1012585 -  -2.6  -5.44119   TGGAGCGGAAAAAAA              CTATCTG CCT CAGA-AG              CTGCCGATATGGGGC  79 306
        khtS NONE
        khtT 1010998 .. 1011008 -  -5.4  -3.82946   CGACTTCAAATACAA                 GATG GTC CATC                 GGGGCTCACACGCCC  63 31
        khtU 1009763 .. 1009784 - -14.5   -4.3179   TGAAAAAACGACAAA           GCAGCACTG ATTA CAGTGCTGC            TTTTTTTATCCCTGT 100 31
 JR441_05155 1005696 .. 1005717 - -11.7  -4.56133   GGCTAATAAGCAAAA           TCCCTTCTT GGAT AAGAAGGGA            TTTTTTATTCATTCA  95 38
 JR441_05140 NONE
        yheD 1001371 .. 1001394 -  -8.9  -3.89695   TTTGGATAAAGATAA          GCCCGCTTT ATTAAA AAAGCGGAC           AGGTTACGAAGGCCA  80 29
 JR441_05130 1001007 .. 1001030 - -12.5  -6.02919   TGAGAAAGAAAAAAA          GCTTAGCCG TTTAGG CGGCTAAGC           TAGTCATAAATATGA 100 25
 JR441_05125 1000571 .. 1000593 -   -17  -4.77173   GGGTGACAAAATAAA           GAGAGCGCGG AAA CCGCGCCCTC           TATAGCCATATATTG 100 46
 JR441_05120 1000379 .. 1000395 -  -2.3  -3.20028   TTCATTATAAAAGGA              TGTTC TCAGTTT GAACA              GCGCGGGAAAGAATA  43 14
 JR441_05115  999687 ..  999708 - -11.7  -5.06103   ATAATGCTCAAAAAA           CCCAAAACA ATTG TGTTTTGGG            TTTTTGGTTTATGTA 100 42
 JR441_05095  994938 ..  994958 - -11.9  -4.45115   ATGAATATAAAAGAA            GTGAGCACA GGG CGTGCTCAC            TTTACAATCAGGACG 100 22
        nhaC  993439 ..  993463 -  -7.9  -4.81082   AATGAACGAAGAAAA         GAGC-CCGCT TTATAC AGCGGAGCTC          TTTTTATTTTTTAAC  88 29
 JR441_05080  991416 ..  991438 -  -9.1  -5.24129   TTTGGGCATAAAAAA           GTGAGCCGC CTTAT GCGCCTCAC           TTTTTTATTCATGAA 100 30
 JR441_05060 NONE
 JR441_05055 NONE
        crcB  987293 ..  987309 -  -6.5  -3.42256   ATCGATTCAAGAAGA              CGTCGAT ACG ATCGGCG              GGCTGATATTAAAAG  59 251
        cueR  983986 ..  984012 -  -7.4  -3.51329   TATGTCCAATTAGAA         CCTTCACTCT AGCAATG AGAATGAAGG         TAACACCTCCTGTTA  67 53
 JR441_05030  982611 ..  982644 - -18.5  -4.14392   CCTGAACTGTGAAAA     TAAGAAAAGCACCTT ATAC AAGGTGCTTTTCTTA      TTATGCTTCCTGCTG 100 26
        sigM NONE
 JR441_05010 NONE
 JR441_05005  978794 ..  978811 - -11.3  -5.63103   GTGTAATGAAAAAAA             GACGCCT GAAA AGGCGTC              TTTTTTAAAAGCCAA 100 30
        citR  970599 ..  970616 - -11.3  -4.55118   TAATTTTAGAGAAAA             CCCGTTC ATTG GAACGGG              TTTTTTTATTAGACG  95 64
        phoA  967643 ..  967666 -  -9.6  -5.29782   GATATTTATAAAAAA          GAGGATGCAG CGTT CTGCATCCTT           TTTATTTTCCAGTTT 100 27
 JR441_04950  964500 ..  964546 -  -7.5  -6.11019   AAAAATGAAAAAAAA GGAATTAAAAAAACATGCACCC AGCT GGGTGCATGTTTTTTGC-TTAC ATGTCATTCGGCGGA 100 22
        nsrR  963981 ..  964004 -  -5.4  -5.63504   AAGGGCATAAAAAAA          GAAGGAAT CTTAATCT ATTCCTTC           ATTTTTAAAAGCTTC  88 16
        lytF  962342 ..  962366 -   -10   -5.4505   GGCTCTAATAAAAAA          CTGTACAGCC GTTAA GGCCGCACAG          TTTCTGTTTTTAGAA 100 35
 JR441_04930  961541 ..  961562 - -15.9  -3.93057   CGCAAAAGCAGGAAA           TCCCGGCGT CTAA ACGCCGGGA            TTTGTTTATGTGAGA 100 31
 JR441_04860  946180 ..  946199 -   -10  -4.67353   CGAGTGACTTAAAAA            GCCG-AGGC AGT GCCTGCGGC            TTTTCTTCATGAAAA  91 32
 JR441_04845  941145 ..  941181 -  -2.4  -5.51165   AAAATTTGAAAAAAA   CAGTGCGGCATTGGATAG TAT CTATCCAATGC--CTTTG   TTATTAGTGAAGTCC  81 29
 JR441_04830  938969 ..  938993 - -13.7  -4.43213   CGTAACATATGAAAA          CGTGTAATCCC AAC AGGATTACACG          TTTTTTTAACGGCCG 100 31
        dgcK  936074 ..  936089 -  -2.4  -5.68023   TCAGAAGCAAAAAAA              GCGGGC TTGA ACCCGA               AAAAGCATACGCTAA  86 252
        cspB  934804 ..  934823 - -12.2  -5.45802   TTGTCAAAATAAAAA            CTGCAGGT TTGC ACCTGCAG             TTTTTCATATCAATT 100 46
 JR441_04710  917790 ..  917808 - -11.8  -5.08824   TTTTTATGTAAAAAA             GAACACGA CAT TCGTGTTC             TTTTACGTAAGCCAA 100 28
 JR441_04700 NONE
 JR441_04695  916768 ..  916793 -  -9.7   -5.4505   GCTGGTAAGAAAAAA         CTCCGGC-CGAT TAC AGCGCGCCGGAG         TTTTTTTCGTTTTTC 100 10
 JR441_04660  910082 ..  910099 - -12.7  -5.88197   CTAAATAGAAAAAAA             CCCGCTG ATTA CAGCGGG              TTTTTGCATTTCTAC 100 42
 JR441_04650  908255 ..  908280 - -14.9  -6.13503   TATCAATAAAAAAAA         TGAAGATGGAG AATG CTCCATCTTCA          TTTTTTTAGAAAAAC 100 31
 JR441_04635  905091 ..  905122 -   -16   -5.5112   TGGAGCAATAAAAAA      GAGACGGCATCTCA TCTT TGAGATCCCGTCTC       TTTTTGTGGTCTTTA 100 64
       spo0M  903897 ..  903918 - -13.1  -4.70659   CGGTATACTGAAAAA           CCCGTTTCT TAAC AGAAACGGG            TTTTTATTTTTTATT 100 72
 JR441_04520  895513 ..  895541 -   -14  -4.86773   GAAAATCATTAAAAA        TAAGCTGACCGC ACGAA ACGGTCAGCTTA        TTTTATTTCGATATT 100 28
 JR441_04505  893000 ..  893018 - -13.2  -5.94713   ATTCCATAAAAAAAA             CAGGAGCT CAA AGCTCCTG             TTCAAGGTATTTGAT 100 42
 JR441_04500  891735 ..  891752 -  -9.1  -5.60993   TTGTGTATAAAAAAA             CCCGGCT GTTT AACCGGG              TTACTCTTCTGTTTC 100 26
 JR441_04470  887325 ..  887344 - -10.7  -3.42346   AAGATGGCAGTAGAA            GCAGCCG TCATCT CGGCTGC             TCCGTAAACCATTCT  80 40
 JR441_04460  885035 ..  885058 - -14.6  -4.76312   TATAAGACGTAAAAA          GCCCGGCTCT ATAT AGAGCCGAGC           TTTAATTTTTTCTGA 100 10
 JR441_04425  878671 ..  878691 - -11.2   -4.7339   AATAAAGGGTAAAAA            CAGCTGCA GTGTA TGCAGCTG            TTCTTCTTTACCGTT 100 33
 JR441_04405 NONE
 JR441_04400  875019 ..  875033 -  -5.8  -3.87956   AAAAGTGATATCAAA               CAAATA TAG TATTTG               GTTTTAAGGGGTTAT  65 47
 JR441_04395  874762 ..  874790 - -13.2  -4.81851   ACTGAAATGTAAAAA        GCCCCTTGTCTC AAACG GAGACAAGGGGT        TTTTCATTAACGAGA 100 32
 JR441_04370  869922 ..  869945 - -15.4  -5.46698   GGCAAAAGCAAAAAA          GACTCCGTCT AATA AGACGGAGTC           TTTTTTTTATTTCGT 100 32
 JR441_04360  866671 ..  866700 -  -7.1  -5.95539   TGTCAAATAAAAAAA       GCCTG-CTCCCGCA GTT TGCGGATGACAGAC       TTACAGATTTATTCT 100 34
 JR441_04355  864665 ..  864678 -  -3.8  -2.88663   AGCCAGCTTGACACA               CCGT ACCGGG ACGG                TGGATGGACCGTTCG  46 389
 JR441_04345 NONE
 JR441_04340  862522 ..  862543 -   -13  -4.41633   CAGGGTGAAAAACAA           GCGGCAGG GGGGCT CCTGCCGC            GTTTCTTTACTTCTC 100 32
        padR  859718 ..  859738 - -11.2   -5.0538   TCCGAGCCTAAAAAA            CATCTGCC GTTTA GGCAGATG            TTTTTTTGCATGTGG 100 73
 JR441_04255 NONE
 JR441_04250 NONE
 JR441_04245 NONE
 JR441_04240 NONE
 JR441_04235  838870 ..  838880 -  -5.4  -2.85606   TTATAGAGGAGGAGA                 GCTT TTA AAGC                 TTCGGATGATTCTCA  52 19
 JR441_04230  838467 ..  838489 - -14.2  -5.34309   AGGATTAAACAAAAA           TGGCCCGCTT CAT AAGCAGGCCA           TTTTGTTATCCGCGC 100 31
        corA  824562 ..  824580 -  -6.7  -5.55769   GCTTACAACAAAAAA             GAACAGC TGCTC GCTGTCC             TCATTTAAAAATATT  93 26
 JR441_04165  823595 ..  823614 -  -9.3  -3.82656   TGTAAAAGAGAAAGA            CCTCTCC TTAAAC GGAGAGG             CTTTTCTTTATTTTA  83 33
       yfkAB NONE
        mscC  820367 ..  820387 - -10.5   -5.7827   AAGATAAATAAAAAA            CTGATTCCA ACT CGGAATCAG            TTTTTTTTGTTTATT 100 36
 JR441_04130  817063 ..  817087 - -14.3  -4.49311   ACCATTAGCATAAAA          GCCTCCTGACA TGA TGTCGGGAGGC          TTTTTGATTAAGAAG 100 33
 JR441_04110  814791 ..  814814 -  -8.8  -5.42265   GGAAATGATAAAAAA          GACTCGCCGA GTTT CCGGCCAGTC           TCCATTATTTACGAA 100 30
 JR441_04105  813487 ..  813506 -   -15  -5.74288   AGAAATAAGAAAAAA            CGGACGCC CACG GGCGTCCG             TTTTTTTGTTGCTTA 100 38
 JR441_04095  808302 ..  808322 - -16.9  -4.78326   GTTTAAATAAAGAAA            GCTGCTCGC TTA GCGAGCAGC            TCTTTTTTTATGCCT 100 33
 JR441_04070 NONE
 JR441_04065 NONE
 JR441_04060 NONE
 JR441_04055  799384 ..  799398 -  -2.8  -4.93877   GTTTATCAAACAAAA               GAAGCT AAA AACTCC               TAGTGCTTTGCTTTG  68 25
        ltaS  795235 ..  795256 - -15.9  -5.63517   CTGTCAAATAAAAAA           GCGGAGAGG TTGC CCTCTCCGC            TTTTTCTTATTTATC 100 32
         map  792526 ..  792546 - -15.4  -4.34759   GACAATATCAAGAAA            GCCGGGCG CATAT CGCCCGGC            TCATGTTTTATTGTT 100 429
 JR441_04015 NONE
 JR441_04010  791964 ..  791987 -   -11  -5.47159   GTTGAATAGAAAAAA          GCCGCGCA TATCAACG TGCGCGGC           TTTGCCATATTTAAG 100 36
 JR441_04000  790911 ..  790923 -  -2.7  -3.40403   CCGCTCCTATGATAA                CTCAA TCG TTAAG                CCGAACTATTTTTAT  46 52
 JR441_03950  780043 ..  780067 -  -2.1  -3.72893   TATTTTTTTAGTAAA          GAAAGCTGC GTTTTTT ACTGCTTTC          TCATGAAAGCATCAT  49 15
        yfmC  778968 ..  778990 - -10.6  -3.80855   GGTTGCAAAAACGAA           GAAGCAAGGA TTC CCCTCGCTTC           TCATTTGTCCTATTT  86 35
        fecD NONE
        yfmE NONE
        yfmF  776095 ..  776112 - -11.3  -5.36441   CTGGCATACAAAAAA             GGAGAGG GGCT CCTCTCC              TTTTCATTTCGCCCG 100 29
 JR441_03925  774959 ..  774977 - -11.7  -4.80455   CATCGAAACACAAAA             GGAGGGC AAAAA GCCCTCC             CGTTTTCATCTTCAT 100 41
 JR441_03910  771535 ..  771554 -  -8.5  -4.75404   AAATGGCAGTAAAAA            CCCGCCC TTTAGC AGGCGGG             TTTTTTTATAAATTA  95 38
 JR441_03870  762603 ..  762626 - -14.6  -5.31158   TAAAAAAAGGAAAAA          GCCGGCGGGTG AGG CACC-GCCGGC          TGAAAAGAGATTATT 100 36
 JR441_03865  761825 ..  761850 -  -6.2  -2.57069   CTTATGAAAGAAACG         CCGTCAGCCTG ATTAG CAG-CTGACAG         TATTTTCGATATTCA  54 12
 JR441_03860  760470 ..  760491 - -11.5  -5.14965   AGCTGGATTAAAAAA           CCCCCTGCC GCCT GGCAGGGGT            TTTTTCAGCTATGCC 100 30
 JR441_03820  748340 ..  748363 -    -9  -4.46112   GGTTATCTAAAGAAA          GAGAGAATAC TGAA ATATTCTCTC           TTTTATTATTTTCAA  90 47
 JR441_03790  743597 ..  743616 - -13.6  -5.82172   AGTAACATAAAAAAA            TCAGCCGG GAAA CCGGCTGA             TTATTAAAATGAGCA 100 29
 JR441_03785  743131 ..  743159 - -13.1  -4.46233   TCAATGTCAAAGAAA        GCGCAGGGCGG AATCGAA CCGCCGTGCGC        AACAGTTTATTCTTT 100 32
        hmoA  742713 ..  742732 -  -8.6    -5.252   GACTCTTAGAAAAAA            GCTTGCAGC AAG GC-GCAAGC            TTTTTATTGATTGTA 100 29
 JR441_03610  706149 ..  706185 - -11.9  -2.88236   TAAAGTGAGATGAGA   TAAATCTAAAGCCCTC AATTAA GAGGGC-TTAGATTTA    TTAAGCAGAGCTGGA  84 79
 JR441_03605  705717 ..  705738 -    -3  -5.45726   GAGACCGTAAAAAAA           GTTTTCGG TGCAGT CCGAAAAA            GGGAGTTTGGGTGTT  77 99
 JR441_03595  704556 ..  704575 -   -10  -4.03995   TTCTTCAGAAAAAGA            GACACAGC CTAA GCTGCGTC             TTGTCCTTAACCGAG  86 32
 JR441_03575  697425 ..  697442 -  -9.1   -5.4756   AACGCTAATAAAAAA             GCAGCCC TTAG AGGCTGC              TTTTTATGGTTAAAT 100 35
        opuE  692288 ..  692310 - -14.2  -4.57533   AACAAGAGCACAAAA           GCCACCAAGC TGC GCTTGATGGC           TTATTGCTTACTTTT 100 33
 JR441_03550  691486 ..  691511 - -13.4  -5.03994   GTGTAGATAGAAAAA         GCCAATGGGA ATCCAG TCCCATTGGC          TTTTATAATGTATCA 100 28
 JR441_03520  682231 ..  682255 - -13.6  -3.82525   CAAAATAACATAGAA         CCGCCC-TGCC GTTC GGCAAGGGCGG          TTTCTTTATGAAACA 100 31
 JR441_03500  678753 ..  678777 -  -9.4  -5.93809   TGGGCATAAAAAAAA          GCTTGATCAC GTTTT ATGATCAAGC          TTTTCCATTTATCCG 100 34
 JR441_03490  676903 ..  676922 - -10.7  -4.32651   AATAAGTGAGGAAAA            CCCGCAG ATGAAG CTGCGGG             TTTTTTTATTATGTA  90 34
 JR441_03365 NONE
        gabP  648500 ..  648523 -   -14  -5.14949   AAGAAAATAACAAAA          TCCTAAACGG CAGT CCGTTTAGGA           TTTGATCAGCATTAA 100 37
        cotA  646814 ..  646832 -  -8.9  -5.72622   TTCACAAAGAAAAAA             CTTGCCT GCTAG AGGCAAG             TTTGTCGGGTTATTT 100 35
 JR441_03350 NONE
 JR441_03345 NONE
 JR441_03340  644487 ..  644511 -  -5.7  -4.91573   AAAACAGACGAAAAA          GCCCTAAAC GTTTACA GTTTTGGGC          TTCTTTCTTCGTATT  78 148
 JR441_03335  644252 ..  644273 - -10.1  -5.20534   ATTAACTAATAAAAA           CCACTCGGC ATGA GCTGAGTGG            CTTTTTTAATGGATG 100 31
        bdhA  641247 ..  641270 - -15.4  -5.68023   GGATAATTAAAAAAA          GAATCCGCAC CCGA GTGCGGATTC           TTTTTGGTTTCAAAT 100 40
 JR441_03310  638190 ..  638215 -    -9  -4.26589   ATCATACAGTGAAAA         GTCCGGAGTG ATCAGA CACTCGGGAC          TTTTTTATTTAGGAG  83 30
        gutR  628136 ..  628147 -    -3  -3.84887   ACAAAAGGCATTAAA                GAAA TTAT TTTC                 TATCGATCTCACACC  52 40
 JR441_03265  626366 ..  626396 - -11.3   -4.7497   TTGATTGATTAAAAA       GCACTTTTGACTT TTTTG ATGTCAAAAGTGC       GTTTTCTTTTATAAC 100 172
 JR441_03240 NONE
 JR441_03235  620175 ..  620199 - -12.3  -4.67635   CTGAAAATGACAAAA          TCCTAAAACGA AAG CCGTTTTAGGA          TTTAATTTGAATCCA 100 66
 JR441_03210  615803 ..  615822 - -12.2  -4.82901   TTCTGTGGATAAAAA            GCACCTCT AAAA AGAGGTGC             TTGACTTTTTTAATC 100 35
 JR441_03145  605190 ..  605233 - -20.6  -2.58767   TGAATCAGTAATGTA CAATAAGAAGGTGCTCAAGA AGTT TCTTGAGCACCTTCCCACTG GATTAAGCATTCATA 100 28
        pbuE  596425 ..  596444 - -10.8  -5.42265   CTAAATCATAAAAAA            TCCTCCTT TTAC AAGGAGGA             TTTTTTTGCTGTCTG 100 14
 JR441_03085 NONE
 JR441_03080  593528 ..  593573 -  -4.3  -3.47392   GAAATGAAAAAAGTA GAAAAGGCATAACATAT GAGCTGTATAAA ATATGCTATTCCTTTTC ATTTGTCTATTTTTC  55 52
        phoB  591383 ..  591417 -  -7.9  -4.72272   TTCCTCCATTAAAAA     GAGATCCCGTTACTT CATAC AAGCAACGGGACACC     TTGTAATCTTTTACT  88 36
 JR441_03065  590620 ..  590646 - -19.6  -5.44198   AACAAATAAGAAAAA         GAACTCCCGTAC CTT GTACGGGAGTTC         TTCATTTAAAACTTG 100 31
 JR441_03045  586186 ..  586202 -  -8.7  -5.66684   GAATTCATAAAAAAA              CCTGACA TGA CGTCAGG              TTTTTTGTTTTATTT 100 39
 JR441_03035 NONE
 JR441_03030  583485 ..  583517 - -21.5  -4.65895   GGCTGTACTTAAAAA      CAAAGAGCCCGGAAA ACA TTCCCGGGCTCTTTG      TTTTATTTCCATTCT 100 28
        dinB  579548 ..  579569 -   -13   -5.0133   TATTTCCCGAAAAAA           GCGGCTCC ATTTAG GGAGCCGC            TTTCTTATGCTTTTT 100 30
 JR441_03010  577990 ..  578016 - -11.7  -5.52384   TTTTCATCAAAAAAA        CTCCTGCTCTCA TTTT TGAG-GCAGGAG         TTTCGGGTGTTATTG 100 35
        vmlR  576015 ..  576032 -  -9.9  -5.76237   CATATAAAGAAAAAA             GGACAAC AGCT GTTGTCC              TTTTCAATGCCGCTT 100 53
 JR441_02985 NONE
 JR441_02980 NONE
        cotP  572597 ..  572607 -  -3.2  -4.37067   CAAATATGAGGAAAA                 TGCG TTA CACA                 CTTGATTATTTAAAT  62 409
 JR441_02965 NONE
 JR441_02960  570762 ..  570782 -  -9.7  -4.59944   ATCAGCAGAAATAAA            GCCGCCT GATAAAG AGGCGGC            AGATCGTTATATGTC  91 370
 JR441_02955  570338 ..  570353 -  -7.6  -5.57054   AATAAGGCAAAAAAA              GAACTC AAAT GAGTTC               TTTTTTTATTCTTCA 100 31
        mneP  566338 ..  566354 -  -7.3  -5.95286   AGCAAAAAGAAAAAA              CTCCTTC TAA AAAGGAG              CTTTTCATTCTTCGA 100 30
 JR441_02925  565385 ..  565403 -  -5.3  -5.13354   TGCATAAAAAATAAA             CCCTCTA GTTAG TAGAGAG             TCAAGGGAGATCAAA  81 55
 JR441_02920  564633 ..  564645 -  -4.8  -2.67255   TAACAGAATATTAAC                CTCC TTTGT GGAG                CCGCTTCATTAAAGC  49 34
 JR441_02915  563144 ..  563163 -  -7.9   -5.0916   TGTGTAATAGAAAAA            GCAGATC TTTTAT GATCTGC             TTTTTTGCTTATGGT  93 411
 JR441_02895 NONE
 JR441_02890  558398 ..  558408 -  -6.8  -2.90075   GCGGTTTGAATGACA                 GCTG TTT CAGC                 GTCTTTTGGAAAGAA  58 21
 JR441_02885  557397 ..  557407 -    -4  -4.39092   AAAGCAAAAATCAAA                 TCTT TAA AAGA                 GTCAAAAGAGAAAAA  64 493
 JR441_02875  556321 ..  556349 -  -3.2  -5.14563   TGTTTCACTAAAAAA        GAGATCAAGC CTAATGATC GCTTGATCTG        ATAATAACAAGGGTT  73 79
 JR441_02865  553753 ..  553774 - -11.7   -3.1169   AGAACCTTAAAAGGA           GATACCAAC CGAT GTTGGTATC            TTTTTTGTTTTAGAG  84 35
 JR441_02835  548142 ..  548167 -  -9.8   -4.1347   TCTGAATCACAGAAA         TACCAAGGGC GTCAAA ACCCTTGGTA          TTTTTTCTGCCAAAA  86 62
 JR441_02825  546586 ..  546600 -  -7.1  -2.69468   TAGCTTTACATATGA               GGCAC TCCTT GTGCC               ATTCCCCACTTACAC  60 1
 JR441_02820  545878 ..  545894 - -10.8  -4.00468   ACGATAACTCAGAAA              GCCCGC TTTTC GCGGGC              TCGATTGAAGCAGAT  89 53
 JR441_02805  542769 ..  542793 - -10.1  -4.54047   CGATCGCATACAAAA          TACCAAGGG TTGCTGG CCCTTGGTA          TTTTTATACCTTCAT  91 73
 JR441_02795  541309 ..  541340 - -13.2  -3.05384   TCTTTCGGTATCCAA      TAATACCAAGGGTA TAAC TGCCCTTGGTATTA       TGTTCTGCTGCACAT  93 202
 JR441_02785  539783 ..  539802 -  -6.5  -5.24796   TCTATAGAAGAAAAA            CAAGCAT AGTAAG ATGCTTG             TTTTTTCTTAGGACA  86 292
 JR441_02760  534315 ..  534340 -  -9.1  -4.87626   CGGCAATATCAAAAA         TACCAAGGG TTTTGACG CCCTTGGTA          TTTTTTCTTCAAGAA 100 73
 JR441_02750  532086 ..  532126 -  -8.4  -3.10878   ATTAGGTCAATAAAT GCCC-TAACGGAGAGAAGT AGTC ACTTTACTCCATTAAGGGC  GGAGAAGTGCTACTG  67 183
 JR441_02745  531128 ..  531150 -  -9.3  -4.28432   AAGGTTAATTGAAAA           GCAAACTAT ATAAA ATAGTTTGC           TTTTCTTTTTGTTAT  86 37
 JR441_02740 NONE
 JR441_02730  527434 ..  527472 -  -9.7  -5.15634   GAGTCCACTAAAAAA  GTGCTGACCTCTGCACAAC ATC GTTGCGC-GA-GTCTGCAC  TTTTATTCTGCGATT 100 55
 JR441_02715 NONE
 JR441_02710  523620 ..  523635 -  -2.6  -4.52101   AATAAGTAATGAAAA              CTCTTA TCTC TAAGAA               ATAATTTTTGAGGAC  60 154
 JR441_02705  522855 ..  522883 - -10.3  -4.25283   ATTTTGTGACTAAAA        CTGACCACTTACT TTA AGTAGGTGGTCTG        ATTTGTCCGCAAAAG  90 144
        cmpA  521265 ..  521284 -  -6.4  -5.09259   TATGGTAAAATAAAA            GCACTGCT TACG AGCAGTGT             TTTTTCCTATAGAAA  86 13
 JR441_02585  509700 ..  509745 - -18.1  -4.12902   CAATCACGCTGAAAA GATGACAAAATCCTAAA-ATGA AAA CCATTTTTAGGATTTTGTCATC AATCTGAAGCGGCGG 100 41
 JR441_02555  502481 ..  502508 -  -9.3  -5.26907   GAAGACAAAATAAAA        CATGAACACGA TGTCAC TCATGTTCATG         TTCATGTAGAGCCTG 100 69
 JR441_02545 NONE
        fbpB  501103 ..  501117 -  -7.1  -5.64274   TGAGTCATAAAAAAA               GAGCC TAGCC GGCTC               TTTTTATGTATTGTT 100 29
        dctB NONE
 JR441_02490  490506 ..  490528 -   -15  -4.01939   GAAGGCATAATCAAA           GCCCAAAACA TCA TGTTTTGGGC           TTGTCTCTTTACTCG 100 34
 JR441_02465  487734 ..  487747 -  -3.9  -3.87075   ATCACCTCTCATAAA               TGATT TACC AATCA                ATAACCGCTCCTGAT  56 70
 JR441_02460  487413 ..  487439 - -12.4  -4.96848   GGTCCCATATAAAAA         GACATCGTTTCA TTT CGAAACGATGCC         TCCTGTATCTAATGA 100 43
 JR441_02455  485922 ..  485950 - -13.3  -4.56597   GCTTTTGCGGAAAAA        TAAAAACCGGCTT TAG AAGCCGGTTTTTT        TATTGAAACGTATCT 100 25
 JR441_02450 NONE
 JR441_02445  485285 ..  485302 -  -4.1  -4.07568   CGCTGCCTGGCAAAA             TCACCTA CGGG CAGGCGA              AAGGCTTTAGCAAGT  59 134
 JR441_02390  470393 ..  470415 -  -9.9   -5.4505   GGTTTTAATAAAAAA           GGCTGGATC ATAAA AATCCAGCC           TTTTTTGCGTTCCCT 100 40
 JR441_02360  465784 ..  465819 - -12.7  -4.45083   TGTACATTCATAAAA    GAAGAAGCCCGTCCAC TTTAT GTGG-CGGGCTTCTTT    GCAGTTGCACAGACG 100 7
 JR441_02335  457922 ..  457941 - -10.7  -4.53303   CAGTTTCATAGAAAA            CGCGCCT CATGAC AGGCGCG             TTTTTTATGTGTGAT  95 425
 JR441_02285  450590 ..  450613 -  -9.6  -5.85011   GAAAAATGAAAAAAA          CCCTTCACAA CATT TTGTGAGGGG           TTCTATTTTGTGTCG 100 28
 JR441_02275  449107 ..  449118 -  -5.8   -4.9218   CATTCATGACAAAAA                GAGC GGCC GCTC                 ATTTGTCAAACGTTT  78 404
        ycnK NONE
        ycnJ NONE
 JR441_02230  440994 ..  441020 - -11.6  -5.95539   GGTTAAACAAAAAAA         GCGACCCAGACA TGA CATCTGGATCGC         TTTTTTGATTAGGCA 100 34
 JR441_02215 NONE
 JR441_02210  437605 ..  437647 - -18.3  -2.99849   TAATAAGTGAAATTA TAAATAAAAAAGAAAGACT ATAAA AGTCTTTCTTTTTTATTTA TGCTTTGACGCAAGG 100 193
 JR441_02205  435572 ..  435624 - -17.3  -5.47159   TCCCAATAGAAAAAA CACCTCCAAGTCTAATTTCGGATAA CAA TTATCCGTATTCAAACTTGAAGGTG TTTTTATTTGTCTCA 100 183
        gabR  429818 ..  429844 -  -2.3  -5.85244   AAGCAAAAGAAAAAA        CGTGCAGCACCT GTGC AGATG-TGCAGG         TTGCCAAATCGACTT  91 197
 JR441_02175 NONE
        nfsA  428472 ..  428496 - -17.9  -4.06055   ACCGGGTAAATGAAA          GGCCTGCCGGA AAA TCCGACAGGCC          GAATAAGAGCTTATT 100 36
 JR441_02165  427480 ..  427490 -    -4  -2.57354   CTAAGTAATTAACAG                 TGTT TTT AACA                 TGGAAACGGGCTGTG  45 0
 JR441_02160  425990 ..  426014 - -12.2  -5.13016   AAGTAAAACCAAAAA         GAGCCTCCGCT AAAT AGCGG-GGCTC          TTTTTTTGTTAATCA 100 38
 JR441_02135  420581 ..  420602 - -15.9  -5.37043   AGGTGATATAAAAAA           TAGCGGGCG CTGC CGCCCGCTA            TTTATGTACGATTAA 100 37
 JR441_02130  420311 ..  420323 -  -3.4  -4.12942   GCAAATGCTGCAAAA                CTGT GGCGG ACAG                GGTCCCGCAGAGACG  57 50
 JR441_02125  420127 ..  420151 - -18.7  -5.40072   TTCTTTTCAAAAAAA          CACCGCAAGAC ATA GTCTTGCGGTG          CCGCCTTCATGGAGA 100 51
 JR441_02100 NONE
 JR441_02095  414093 ..  414135 -  -7.8  -5.65513   GAGGAAGCAAAAAAA TGATAAAAAGAGCGGGGG GATGCGG CCGCCGCTCTTTTTATGT TCACTTCTATATAAA 100 90
 JR441_02075  409746 ..  409764 -  -2.2  -5.41143   TATTGTCTAAAAAAA             GCGCCCCC TCT AGGGGTTC             TTTTTTTTCGATTTA  73 16
 JR441_02065  406193 ..  406220 - -17.8  -6.13503   GATCAATAAAAAAAA        CAGCCCGCAGAT CAAA ATCCGCGGGCTG         TTTCTGATTATAAGA 100 33
        bsdA NONE
        tcyA NONE
        tcyB NONE
        tcyC  399120 ..  399160 - -18.7  -4.12902   CAATCACGCTGAAAA  TCACAAAATCCTAAAACGA ATA TCGTTTTAGGATTTTGTCA  ATAATCTGAAACAGG 100 64
 JR441_02015  398210 ..  398228 -  -9.6  -6.14618   GAGAAAATAAAAAAA             CAAAGCCA AGG CGGCTTTG             TTTTAGTGTACAGGC 100 28
 JR441_02010  397320 ..  397335 -  -4.7  -5.14477   CATAGACTGAAAAAA              CAAGG GGTTCT CCTTG               AGGCGATAGACCGTC  77 142
 JR441_02000 NONE
 JR441_01995  394433 ..  394467 - -13.8  -3.27297   ACCCACCAATCAATA     TAAAAGGATCAGCACT GTC AATGCTGATCCTTTTT     AAATTTGAGTTTTTT 100 8
        hxlA NONE
        hxlB  364561 ..  364581 - -16.9  -5.49579   TTAGAAAAAATAAAA            CCGGCCTGA TCT TCAGGCCGG            TTGTGTGATGCTATT 100 36
 JR441_01950  362760 ..  362778 -  -5.3  -2.59458   AATGATAGTAAGTCA            TC-AGCCG TTTT CGGCTTGA             TTAATCATTTTAAAT  51 7
        nucA NONE
         nin  361686 ..  361710 -   -10  -2.73034   AAAGTTTATAAAGAG          TCCCTGAGAG TTATT CTCTCAGGGG          TTTTTCATTACACAG  74 33
 JR441_01915  358116 ..  358132 -  -5.1  -2.97475   CGTCCGATTACAAAT              CAACGTC CTG AACGTCG              GCATCAATTTTTTTT  52 1
 JR441_01910  357377 ..  357396 - -11.4  -5.82172   ATCAATAGAAAAAAA            GCCGTCCC ATGG GGAACGGC             TTTTTTTAATGAAAC 100 47
        nasB NONE
        nasC  348284 ..  348294 -  -2.6  -4.66264   GAAAAGTTCTAAAAA                 TTTT ATG AAAA                 ATTTAAATAGGTCTG  62 28
        nasD NONE
        nirD  345376 ..  345396 -  -7.6  -3.93769   ACTGTAAAAAATGAA            GGACCACT AGAAA AGTGATCC            GGTCTTTTGATCAAT  74 36
        cobA  343866 ..  343887 - -10.2  -5.05113   GGTACATAAATAAAA           CAGCCCTT GGGGGA AAGGGCTG            TTTGCCATCAGCTGT 100 33
 JR441_01850  341724 ..  341743 -  -3.6  -3.94438   CAGCTGAAGAAAAGA            TGATTGTG CTGT CACAATAA             AACCTCCGCTCATGT  56 120
 JR441_01845 NONE
 JR441_01840  339948 ..  339971 - -12.6  -5.88476   AAAAGAAATAAAAAA          GAAACCAGTA CTTG TACTGGTTTC           GTCTTCACTTAAAAT 100 34
 JR441_01800  330574 ..  330592 -   -16  -4.66609   CAGCCGATGTAAAAA             GCCGTGCG CAG CGCACGGC             TTTTTTTATCGTTTT 100 31
        tmrB  329101 ..  329119 -   -16  -4.22591   AATAAGTTGAAGAAA             GCCCGCTC TTG GAGCGGGC             TTTTGTCGTGTACAG 100 46
 JR441_01775  325698 ..  325717 - -13.6  -3.30412   AAGACGAAAAAGAAT            GGCCGGAA GACA TTCCGGCC             GATCCTGAGCATTAT 100 384
 JR441_01755  322391 ..  322415 - -17.3  -5.47159   GTGTAATAGAAAAAA          GCAGTACATGC CCA GCATGTACTGC          TTTTTTATGTTAATT 100 35
 JR441_01725  313974 ..  313993 - -13.6  -4.42287   TAAATAATGAAGAAA            GCAGCCTG TAGC CAGGCTGC             TTTTTTGCGTTAAGA 100 35
 JR441_01705  310379 ..  310393 -  -4.2  -4.61868   TATGTATAGAGAAAA               CCCTTT GTT AGAGGG               TTTCCAAAAAGCCAG  68 18
 JR441_01700  308898 ..  308917 -  -9.3  -4.46656   GCTAGAATAGGAAAA            GCACCTC TTGAAT GAGGTGC             TTTCGCGTGTCGACA  91 253
 JR441_01660  300816 ..  300839 - -10.4  -4.46656   CCGATAACATGAAAA          GCAGTTTTCC CTAG AGAAAACTGC           TTTTTTTATAGAAAC  95 31
        cwlK NONE
 JR441_01610 NONE
 JR441_01605  289366 ..  289390 -   -13  -5.27938   ATTTTTAAATAAAAA          GGAAATAGCC GTCAT GGCTATTTCC          TTTTGGTGTTTTATT 100 36
        natR NONE
        natK  284549 ..  284573 - -15.9   -5.1925   TCATAATGGAAAAAA          CCTTGAAAAGC CAG GCTTTTCAAGG          TTTTTTTATTTCTGA 100 31
 JR441_01570  282817 ..  282847 - -12.8  -4.15143   AACTAATGAGATAAA       TAACCTTGAAGAGT CCT ATTCTTCAAGGTTA       TTCTGCTTTCAGCAC  95 23
        lmrA NONE
      lmr(B)  278585 ..  278607 - -10.6  -5.88197   GTAAACATAAAAAAA           GCCCCTGA ACACTAG TCAGGGGC           TTTTCATATTAATGA 100 34
         pcp  276724 ..  276734 -  -8.2  -3.70307   CTGAGGGAAGAAACA                 GCGG CGG CCGC                 TTAGTGCAGCGTACC  74 26
 JR441_01505 NONE
 JR441_01500 NONE
 JR441_01420 NONE
 JR441_01415  252653 ..  252691 - -11.1  -4.86939   CAATAAACGCAAAAA   GAGAAAGGTGTTCAGCC CATAT GTCTGAACACCCTTTTC   TTATGATATTTGTTT 100 26
        mmuM  251543 ..  251567 -  -9.4   -5.4505   CCTCCTAATAAAAAA          TCTCATGTCA GAAAG TGACACGAGA          CTCCGGCGAACCGGC 100 74
        mmuP  250059 ..  250080 - -14.5  -4.87318   GTGAAAATCGAAAAA           GAACCTGCC TGAA GGCAGGTTC            TTTTTATTTTGAATA 100 29
        nagB NONE
 JR441_01380  244842 ..  244862 -  -9.7  -4.57073   TATGTTGGCGAAAAA            GTCCCCC GCAGCAG GGGGGAC            TTTTTTACTTCATTT  91 30
 JR441_01375  243448 ..  243470 - -12.1   -5.7946   TGCTGAATAAAAAAA           GAACACCTC GTATT GAGGTGTTC           TTTTTTTCTATATGC 100 33
 JR441_01315 NONE
 JR441_01310  231662 ..  231692 -  -8.4  -3.90286   GAGGACAAAGGGAAA       GCATCTCTGATT TGGGATT ATTCAGAGATGC       TTTTTTTGTATTTTT  77 232
        glpT NONE
 JR441_01285  226498 ..  226519 - -10.2  -5.10765   AAATAAATAAGAAAA           CCTTGCGA TAGTTG TCGCAAGG            TTTTTTGCTTTTAAT 100 36
 JR441_01275  224304 ..  224328 - -10.1  -5.01042   AAGTTAAATTAAAAA          GCTCTCTTC CTTTATC GAAGAGAGC          TTTTTGATTACTTCT 100 33
      blaOXA  221910 ..  221921 -  -2.2  -4.07568   CGTTGTCCGTCAAAA                CGGA GCCA TCCA                 TGTGTACCACCAAGG  55 170
 JR441_01240  217566 ..  217583 - -12.7  -5.56673   ACGGAGAATAAAAAA             GAGCCGG ATAA CCGGCTC              GGTATAAGTTAAAAC 100 34
 JR441_01235  216353 ..  216367 -  -4.2  -2.81642   AGATTATTGAGGATA               CATGCA GGC TGCTTG               CGATTACTTATGAGC  45 394
        alkA  202191 ..  202203 -  -5.5  -3.91434   AAAGCATGCTAGAAA                TCCGA AAA CCGGA                GAGCCTATTGGAATG  63 176
 JR441_01090  193055 ..  193070 -  -6.8  -2.81922   CACCATGGAAAATAT              CCGCTC ACAA AAGCGG               GAAGCAAAAGCATGG  58 343
        murQ NONE
 JR441_01075 NONE
 JR441_01070 NONE
        amiE  188203 ..  188215 -  -4.1  -2.56011   TAAGCGGAAAGACAG                GTCTC ATA GAAAC                TTCCTCCTATCGTCT  45 47
        nagZ NONE
 JR441_01055  184946 ..  184971 -  -9.1  -5.55664   TTAGCATGAAAAAAA         CCCTTACTTAT GTGT AAAAGTAAGGG          TCTTTCGTTCAATAA 100 77
         btr  183221 ..  183248 -  -2.9  -3.42083   TGAACAGATATAACA        CCATGGACAAAT TCCTG ATTTAT-CATGG        ACAATCTCCGGATAA  46 20
        feuA NONE
 JR441_01040 NONE
        feuC NONE
 JR441_01030  179420 ..  179439 -  -9.3  -5.75599   GAAAGCATAAAAAAA            CCGCTCA TAGGGT TGAGCGG             TTTTTTCCGTATAGC 100 10
        pdaB  159440 ..  159454 -  -2.8  -3.23921   TATAAAGCAAAAGCA               GTCCTC TAA GAAAAC               ATTTGTGTCATCGTT  45 186
        gerD  158318 ..  158348 -  -7.5  -4.42653   AGTGCAGGTATAAAA       GGTGAACCGGGAT TCCAG ATCCCGGCTTTCC       CTTTATTCACTTTCT  82 28
        abrB   44644 ..   44667 -  -9.7  -5.87996   TAAGCAATAAAAAAA          CGTTCTTGT GTCATA ACAAGAACG           TTTTTTGTACAAGAA 100 45
 JR441_00115 NONE
 JR441_00110   23773 ..   23797 -  -7.2  -5.52384   CCCCCATGAAAAAAA          GACGTTTCCA AATTA TCGAAACGTC          TTTTTGACAACATTA 100 13
         dgk NONE
         dck   22395 ..   22416 - -11.7  -5.28942   TATTTTAAAGAAAAA           GTGAATCTC GACT GAGATTCAC            TTTTTTTGATTATCA 100 22
 JR441_00065   14734 ..   14752 - -14.6  -3.69434   CCAAGCAAGCTTAAA             CCCAGCTC ATT GAGCTGGG             TTTTTTGTTTGTTAA 100 37
