CJZ71_00025 SM00318 Staphylococcal nuclease homologues CJZ71_00035 SM01005 Alanine racemase, C-terminal domain CJZ71_00175 SM00257 Lysin motif CJZ71_00180 SM00857 Resolvase, N terminal domain CJZ71_00190 SM00861 Transketolase, pyrimidine binding domain CJZ71_00215 SM00448 cheY-homologous receiver domain CJZ71_00295 SM01207 CJZ71_00295 CJZ71_00300 SM00881 CoA binding domain CJZ71_00305 SM00387 Histidine kinase-like ATPases CJZ71_00305 SM00433 TopoisomeraseII CJZ71_00310 SM00434 DNA Topoisomerase IV CJZ71_00325 SM01067 Cellulose binding domain CJZ71_00385 SM00878 Biotin carboxylase C-terminal domain CJZ71_00420 SM00823 Phosphopantetheine attachment site CJZ71_00470 SM00829 Enoylreductase CJZ71_00515 SM00822 CJZ71_00515 CJZ71_00545 SM00382 ATPases associated with a variety of cellular activities CJZ71_00550 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_00570 SM00155 Phospholipase D. Active site motifs. CJZ71_00690 SM00835 Cupin CJZ71_00795 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_00840 SM00382 ATPases associated with a variety of cellular activities CJZ71_00940 SM00028 Tetratricopeptide repeats CJZ71_01000 SM00860 SMI1 / KNR4 family CJZ71_01005 SM00860 SMI1 / KNR4 family CJZ71_01010 SM00860 SMI1 / KNR4 family CJZ71_01020 SM00860 SMI1 / KNR4 family CJZ71_01035 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_01050 SM00849 Metallo-beta-lactamase superfamily CJZ71_01055 SM00871 Bacterial transcription activator, effector binding domain CJZ71_01070 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_01120 SM00421 helix_turn_helix, Lux Regulon CJZ71_01120 SM00448 cheY-homologous receiver domain CJZ71_01125 SM00257 Lysin motif CJZ71_01130 SM00341 Helicase and RNase D C-terminal CJZ71_01130 SM00487 DEAD-like helicases superfamily CJZ71_01130 SM00490 helicase superfamily c-terminal domain CJZ71_01130 SM00956 CJZ71_01130 CJZ71_01220 SM00861 Transketolase, pyrimidine binding domain CJZ71_01225 SM00327 von Willebrand factor (vWF) type A domain CJZ71_01230 SM00382 ATPases associated with a variety of cellular activities CJZ71_01240 SM00257 Lysin motif CJZ71_01335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_01335 SM00245 tail specific protease CJZ71_01370 SM00014 Acid phosphatase homologues CJZ71_01425 SM00882 Coenzyme A transferase CJZ71_01485 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_01525 SM00382 ATPases associated with a variety of cellular activities CJZ71_01570 SM00567 E-Z type HEAT repeats CJZ71_01570 SM00932 Scaffold protein Nfu/NifU N terminal CJZ71_01575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_01595 SM00357 Cold shock protein domain CJZ71_01635 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CJZ71_01635 SM00475 5'-3' exonuclease CJZ71_01700 SM00354 helix_turn _helix lactose operon repressor CJZ71_01715 SM00491 CJZ71_01715 CJZ71_01730 SM00981 CJZ71_01730 CJZ71_01760 SM00487 DEAD-like helicases superfamily CJZ71_01760 SM00490 helicase superfamily c-terminal domain CJZ71_01820 SM00478 endonuclease III CJZ71_01820 SM00525 CJZ71_01820 CJZ71_01850 SM00479 CJZ71_01850 CJZ71_01850 SM00487 DEAD-like helicases superfamily CJZ71_01850 SM00491 CJZ71_01850 CJZ71_01890 SM00851 MGS-like domain CJZ71_01940 SM00914 CJZ71_01940 CJZ71_01945 SM00028 Tetratricopeptide repeats CJZ71_02010 SM00138 Methyltransferase, chemotaxis proteins CJZ71_02015 SM00562 CJZ71_02015 CJZ71_02055 SM00411 bacterial (prokaryotic) histone like domain CJZ71_02110 SM01240 CJZ71_02110 CJZ71_02115 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_02155 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJZ71_02175 SM00257 Lysin motif CJZ71_02185 SM00487 DEAD-like helicases superfamily CJZ71_02185 SM00490 helicase superfamily c-terminal domain CJZ71_02225 SM00091 PAS domain CJZ71_02225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_02225 SM00387 Histidine kinase-like ATPases CJZ71_02225 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_02230 SM00448 cheY-homologous receiver domain CJZ71_02230 SM00862 Transcriptional regulatory protein, C terminal CJZ71_02250 SM00363 S4 RNA-binding domain CJZ71_02265 SM00936 Penicillin-binding protein 5, C-terminal domain CJZ71_02360 SM00477 DNA/RNA non-specific endonuclease CJZ71_02360 SM00892 DNA/RNA non-specific endonuclease CJZ71_02370 SM00645 Papain family cysteine protease CJZ71_02495 SM00387 Histidine kinase-like ATPases CJZ71_02505 SM00936 Penicillin-binding protein 5, C-terminal domain CJZ71_02545 SM00919 Malic enzyme, NAD binding domain CJZ71_02545 SM01274 CJZ71_02545 CJZ71_02560 SM00870 CJZ71_02560 CJZ71_02565 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_02670 SM00849 Metallo-beta-lactamase superfamily CJZ71_02710 SM00849 Metallo-beta-lactamase superfamily CJZ71_02720 SM01350 CJZ71_02720 CJZ71_02770 SM00382 ATPases associated with a variety of cellular activities CJZ71_02780 SM00062 Bacterial periplasmic substrate-binding proteins CJZ71_02780 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CJZ71_02790 SM00046 Diacylglycerol kinase catalytic domain (presumed) CJZ71_02800 SM00422 helix_turn_helix, mercury resistance CJZ71_02810 SM00861 Transketolase, pyrimidine binding domain CJZ71_02830 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJZ71_02840 SM00091 PAS domain CJZ71_02840 SM00382 ATPases associated with a variety of cellular activities CJZ71_02885 SM00646 CJZ71_02885 CJZ71_02900 SM00448 cheY-homologous receiver domain CJZ71_02910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_02925 SM00363 S4 RNA-binding domain CJZ71_02930 SM00861 Transketolase, pyrimidine binding domain CJZ71_02965 SM00878 Biotin carboxylase C-terminal domain CJZ71_03015 SM00382 ATPases associated with a variety of cellular activities CJZ71_03025 SM00841 Elongation factor P, C-terminal CJZ71_03025 SM01185 CJZ71_03025 CJZ71_03060 SM00529 Helix-turn-helix diphteria tox regulatory element CJZ71_03070 SM00450 Rhodanese Homology Domain CJZ71_03090 SM00487 DEAD-like helicases superfamily CJZ71_03090 SM00490 helicase superfamily c-terminal domain CJZ71_03105 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_03165 SM00382 ATPases associated with a variety of cellular activities CJZ71_03180 SM01091 Transporter associated domain CJZ71_03210 SM00849 Metallo-beta-lactamase superfamily CJZ71_03230 SM00631 CJZ71_03230 CJZ71_03250 SM00028 Tetratricopeptide repeats CJZ71_03290 SM00382 ATPases associated with a variety of cellular activities CJZ71_03295 SM00382 ATPases associated with a variety of cellular activities CJZ71_03340 SM00257 Lysin motif CJZ71_03375 SM00518 AP endonuclease family 2 CJZ71_03380 SM00487 DEAD-like helicases superfamily CJZ71_03380 SM00490 helicase superfamily c-terminal domain CJZ71_03420 SM00400 zinc finger CJZ71_03420 SM00493 CJZ71_03420 CJZ71_03435 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_03480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_03530 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_03545 SM00271 DnaJ molecular chaperone homology domain CJZ71_03565 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_03570 SM00838 Elongation factor G C-terminus CJZ71_03605 SM00849 Metallo-beta-lactamase superfamily CJZ71_03615 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJZ71_03635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_03645 SM01103 CJZ71_03645 CJZ71_03675 SM00644 CJZ71_03675 CJZ71_03685 SM01350 CJZ71_03685 CJZ71_03730 SM00028 Tetratricopeptide repeats CJZ71_03745 SM00860 SMI1 / KNR4 family CJZ71_03750 SM00860 SMI1 / KNR4 family CJZ71_03790 SM00382 ATPases associated with a variety of cellular activities CJZ71_03850 SM00422 helix_turn_helix, mercury resistance CJZ71_03870 SM01091 Transporter associated domain CJZ71_03925 SM00344 helix_turn_helix ASNC type CJZ71_03995 SM00382 ATPases associated with a variety of cellular activities CJZ71_04035 SM00287 Bacterial SH3 domain homologues CJZ71_04075 SM00422 helix_turn_helix, mercury resistance CJZ71_04085 SM00829 Enoylreductase CJZ71_04095 SM00640 Glycosyl hydrolases family 32 CJZ71_04120 SM00382 ATPases associated with a variety of cellular activities CJZ71_04190 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CJZ71_04190 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJZ71_04220 SM00650 Ribosomal RNA adenine dimethylases CJZ71_04275 SM00732 Likely ribonuclease with RNase H fold. CJZ71_04285 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJZ71_04295 SM00382 ATPases associated with a variety of cellular activities CJZ71_04300 SM00062 Bacterial periplasmic substrate-binding proteins CJZ71_04300 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CJZ71_04335 SM00382 ATPases associated with a variety of cellular activities CJZ71_04340 SM00028 Tetratricopeptide repeats CJZ71_04360 SM00382 ATPases associated with a variety of cellular activities CJZ71_04390 SM00287 Bacterial SH3 domain homologues CJZ71_04390 SM00646 CJZ71_04390 CJZ71_04400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_04400 SM00954 Region found in RelA / SpoT proteins CJZ71_04450 SM01323 CJZ71_04450 CJZ71_04470 SM00382 ATPases associated with a variety of cellular activities CJZ71_04475 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJZ71_04525 SM00257 Lysin motif CJZ71_04570 SM01317 CJZ71_04570 CJZ71_04665 SM00257 Lysin motif CJZ71_04675 SM01004 Delta-aminolevulinic acid dehydratase CJZ71_04710 SM00382 ATPases associated with a variety of cellular activities CJZ71_04710 SM00464 Found in ATP-dependent protease La (LON) CJZ71_04715 SM00382 ATPases associated with a variety of cellular activities CJZ71_04720 SM00382 ATPases associated with a variety of cellular activities CJZ71_04720 SM00994 ClpX C4-type zinc finger CJZ71_04720 SM01086 C-terminal, D2-small domain, of ClpB protein CJZ71_04745 SM01329 CJZ71_04745 CJZ71_04750 SM00917 LeuA allosteric (dimerisation) domain CJZ71_04815 SM00487 DEAD-like helicases superfamily CJZ71_04815 SM00490 helicase superfamily c-terminal domain CJZ71_04855 SM00909 Sporulation and spore germination CJZ71_04865 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_04870 SM00421 helix_turn_helix, Lux Regulon CJZ71_04910 SM00465 GIY-YIG type nucleases (URI domain) CJZ71_04920 SM00813 Alpha-L-arabinofuranosidase C-terminus CJZ71_04925 SM00893 Electron transfer flavoprotein domain CJZ71_04930 SM00893 Electron transfer flavoprotein domain CJZ71_04955 SM00463 Small MutS-related domain CJZ71_04955 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CJZ71_04955 SM00534 ATPase domain of DNA mismatch repair MUTS family CJZ71_04960 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJZ71_04960 SM00481 DNA polymerase alpha chain like domain CJZ71_04960 SM00483 DNA polymerase X family CJZ71_04980 SM00873 B3/4 domain CJZ71_04980 SM00874 tRNA synthetase B5 domain CJZ71_04980 SM00896 Ferredoxin-fold anticodon binding domain CJZ71_04995 SM00967 RNA 2'-O ribose methyltransferase substrate binding CJZ71_05030 SM00813 Alpha-L-arabinofuranosidase C-terminus CJZ71_05060 SM01007 Class II Aldolase and Adducin N-terminal domain CJZ71_05125 SM00448 cheY-homologous receiver domain CJZ71_05125 SM00850 LytTr DNA-binding domain CJZ71_05130 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CJZ71_05130 SM00387 Histidine kinase-like ATPases CJZ71_05140 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJZ71_05155 SM00382 ATPases associated with a variety of cellular activities CJZ71_05175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJZ71_05205 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CJZ71_05205 SM01232 CJZ71_05205 CJZ71_05210 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CJZ71_05210 SM00474 3'-5' exonuclease CJZ71_05210 SM00475 5'-3' exonuclease CJZ71_05210 SM00482 DNA polymerase A domain CJZ71_05215 SM00091 PAS domain CJZ71_05215 SM00387 Histidine kinase-like ATPases CJZ71_05215 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_05220 SM00448 cheY-homologous receiver domain CJZ71_05220 SM00862 Transcriptional regulatory protein, C terminal CJZ71_05230 SM01329 CJZ71_05230 CJZ71_05280 SM00919 Malic enzyme, NAD binding domain CJZ71_05280 SM01274 CJZ71_05280 CJZ71_05285 SM00481 DNA polymerase alpha chain like domain CJZ71_05315 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_05320 SM00849 Metallo-beta-lactamase superfamily CJZ71_05345 SM00852 Probable molybdopterin binding domain CJZ71_05420 SM00981 CJZ71_05420 CJZ71_05450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CJZ71_05455 SM00267 diguanylate cyclase CJZ71_05465 SM00363 S4 RNA-binding domain CJZ71_05465 SM01390 CJZ71_05465 CJZ71_05470 SM00363 S4 RNA-binding domain CJZ71_05490 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_05510 SM00354 helix_turn _helix lactose operon repressor CJZ71_05515 SM00830 Chorismate mutase type II CJZ71_05540 SM00382 ATPases associated with a variety of cellular activities CJZ71_05540 SM00843 CJZ71_05540 CJZ71_05575 SM00919 Malic enzyme, NAD binding domain CJZ71_05575 SM01274 CJZ71_05575 CJZ71_05580 SM00849 Metallo-beta-lactamase superfamily CJZ71_05600 SM00642 Alpha-amylase domain CJZ71_05605 SM00046 Diacylglycerol kinase catalytic domain (presumed) CJZ71_05640 SM00382 ATPases associated with a variety of cellular activities CJZ71_05645 SM00420 helix_turn_helix, Deoxyribose operon repressor CJZ71_05650 SM00363 S4 RNA-binding domain CJZ71_05725 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_05725 SM00876 Biotin and Thiamin Synthesis associated domain CJZ71_05755 SM00354 helix_turn _helix lactose operon repressor CJZ71_05780 SM00450 Rhodanese Homology Domain CJZ71_05795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CJZ71_05795 SM00091 PAS domain CJZ71_05815 SM00382 ATPases associated with a variety of cellular activities CJZ71_05820 SM00387 Histidine kinase-like ATPases CJZ71_05825 SM00448 cheY-homologous receiver domain CJZ71_05825 SM00862 Transcriptional regulatory protein, C terminal CJZ71_05835 SM00382 ATPases associated with a variety of cellular activities CJZ71_05850 SM00382 ATPases associated with a variety of cellular activities CJZ71_05855 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_05865 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_05925 SM00382 ATPases associated with a variety of cellular activities CJZ71_05965 SM01234 CJZ71_05965 CJZ71_05970 SM00947 Carbonic anhydrase CJZ71_06005 SM00382 ATPases associated with a variety of cellular activities CJZ71_06020 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CJZ71_06060 SM00984 UDP binding domain CJZ71_06120 SM00642 Alpha-amylase domain CJZ71_06255 SM00244 prohibitin homologues CJZ71_06315 SM00047 Lysozyme subfamily 2 CJZ71_06365 SM00420 helix_turn_helix, Deoxyribose operon repressor CJZ71_06365 SM01134 CJZ71_06365 CJZ71_06370 SM01007 Class II Aldolase and Adducin N-terminal domain CJZ71_06385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJZ71_06385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_06385 SM00319 Homologues of the ligand binding domain of Tar CJZ71_06390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJZ71_06390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_06390 SM00319 Homologues of the ligand binding domain of Tar CJZ71_06395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJZ71_06395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_06395 SM00319 Homologues of the ligand binding domain of Tar CJZ71_06420 SM01091 Transporter associated domain CJZ71_06475 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_06485 SM00344 helix_turn_helix ASNC type CJZ71_06505 SM00387 Histidine kinase-like ATPases CJZ71_06505 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_06510 SM01298 CJZ71_06510 CJZ71_06515 SM00479 CJZ71_06515 CJZ71_06545 SM00091 PAS domain CJZ71_06545 SM00387 Histidine kinase-like ATPases CJZ71_06550 SM00448 cheY-homologous receiver domain CJZ71_06560 SM00382 ATPases associated with a variety of cellular activities CJZ71_06625 SM00421 helix_turn_helix, Lux Regulon CJZ71_06625 SM00448 cheY-homologous receiver domain CJZ71_06630 SM00387 Histidine kinase-like ATPases CJZ71_06655 SM00052 Putative diguanylate phosphodiesterase CJZ71_06700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_06750 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CJZ71_06750 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CJZ71_06760 SM00923 MbtH-like protein CJZ71_06765 SM00823 Phosphopantetheine attachment site CJZ71_06765 SM00824 Thioesterase CJZ71_06850 SM01240 CJZ71_06850 CJZ71_06955 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_07040 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJZ71_07075 SM00382 ATPases associated with a variety of cellular activities CJZ71_07080 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_07080 SM00866 CJZ71_07080 CJZ71_07110 SM00465 GIY-YIG type nucleases (URI domain) CJZ71_07140 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_07155 SM00860 SMI1 / KNR4 family CJZ71_07160 SM00257 Lysin motif CJZ71_07160 SM00644 CJZ71_07160 CJZ71_07370 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_07375 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_07415 SM00382 ATPases associated with a variety of cellular activities CJZ71_07445 SM00382 ATPases associated with a variety of cellular activities CJZ71_07445 SM00930 CJZ71_07445 CJZ71_07460 SM00493 CJZ71_07460 CJZ71_07515 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_07545 SM00382 ATPases associated with a variety of cellular activities CJZ71_07565 SM00382 ATPases associated with a variety of cellular activities CJZ71_07625 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_07630 SM00448 cheY-homologous receiver domain CJZ71_07630 SM00862 Transcriptional regulatory protein, C terminal CJZ71_07635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_07635 SM00387 Histidine kinase-like ATPases CJZ71_07635 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_07675 SM00421 helix_turn_helix, Lux Regulon CJZ71_07675 SM00448 cheY-homologous receiver domain CJZ71_07680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_07680 SM00387 Histidine kinase-like ATPases CJZ71_07715 SM00382 ATPases associated with a variety of cellular activities CJZ71_07740 SM00387 Histidine kinase-like ATPases CJZ71_07740 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_07745 SM00448 cheY-homologous receiver domain CJZ71_07745 SM00862 Transcriptional regulatory protein, C terminal CJZ71_07765 SM00835 Cupin CJZ71_07780 SM00382 ATPases associated with a variety of cellular activities CJZ71_07790 SM00382 ATPases associated with a variety of cellular activities CJZ71_07985 SM00257 Lysin motif CJZ71_07985 SM00644 CJZ71_07985 CJZ71_08015 SM00047 Lysozyme subfamily 2 CJZ71_08110 SM00507 HNH nucleases CJZ71_08210 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_08215 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_08220 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_08245 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_08245 SM00357 Cold shock protein domain CJZ71_08245 SM00955 CJZ71_08245 CJZ71_08265 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_08270 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_08275 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_08285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJZ71_08285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_08305 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_08305 SM00382 ATPases associated with a variety of cellular activities CJZ71_08330 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_08330 SM00382 ATPases associated with a variety of cellular activities CJZ71_08365 SM01192 CJZ71_08365 CJZ71_08365 SM01193 CJZ71_08365 CJZ71_08385 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJZ71_08400 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_08460 SM00421 helix_turn_helix, Lux Regulon CJZ71_08460 SM00448 cheY-homologous receiver domain CJZ71_08475 SM00382 ATPases associated with a variety of cellular activities CJZ71_08485 SM00331 Sigma factor PP2C-like phosphatases CJZ71_08515 SM00354 helix_turn _helix lactose operon repressor CJZ71_08520 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_08520 SM00895 CJZ71_08520 CJZ71_08615 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_08660 SM00640 Glycosyl hydrolases family 32 CJZ71_08705 SM00642 Alpha-amylase domain CJZ71_08735 SM00642 Alpha-amylase domain CJZ71_08740 SM00354 helix_turn _helix lactose operon repressor CJZ71_08760 SM00947 Carbonic anhydrase CJZ71_08775 SM00382 ATPases associated with a variety of cellular activities CJZ71_08780 SM00387 Histidine kinase-like ATPases CJZ71_08785 SM00448 cheY-homologous receiver domain CJZ71_08785 SM00862 Transcriptional regulatory protein, C terminal CJZ71_08835 SM00028 Tetratricopeptide repeats CJZ71_08840 SM00382 ATPases associated with a variety of cellular activities CJZ71_08950 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_08950 SM00866 CJZ71_08950 CJZ71_09000 SM00382 ATPases associated with a variety of cellular activities CJZ71_09005 SM00487 DEAD-like helicases superfamily CJZ71_09005 SM00490 helicase superfamily c-terminal domain CJZ71_09030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_09040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_09040 SM00245 tail specific protease CJZ71_09050 SM00382 ATPases associated with a variety of cellular activities CJZ71_09070 SM00957 SecA DEAD-like domain CJZ71_09070 SM00958 SecA preprotein cross-linking domain CJZ71_09165 SM00487 DEAD-like helicases superfamily CJZ71_09165 SM00490 helicase superfamily c-terminal domain CJZ71_09175 SM00421 helix_turn_helix, Lux Regulon CJZ71_09175 SM00448 cheY-homologous receiver domain CJZ71_09180 SM00387 Histidine kinase-like ATPases CJZ71_09225 SM00382 ATPases associated with a variety of cellular activities CJZ71_09265 SM00984 UDP binding domain CJZ71_09305 SM00382 ATPases associated with a variety of cellular activities CJZ71_09350 SM00047 Lysozyme subfamily 2 CJZ71_09350 SM00287 Bacterial SH3 domain homologues CJZ71_09405 SM00854 Bacterial capsule synthesis protein PGA_cap CJZ71_09430 SM00354 helix_turn _helix lactose operon repressor CJZ71_09445 SM00382 ATPases associated with a variety of cellular activities CJZ71_09460 SM00287 Bacterial SH3 domain homologues CJZ71_09515 SM00903 Flavin reductase like domain CJZ71_09530 SM00344 helix_turn_helix ASNC type CJZ71_09605 SM00984 UDP binding domain CJZ71_09635 SM00487 DEAD-like helicases superfamily CJZ71_09635 SM00490 helicase superfamily c-terminal domain CJZ71_09650 SM00420 helix_turn_helix, Deoxyribose operon repressor CJZ71_09650 SM01134 CJZ71_09650 CJZ71_09675 SM00387 Histidine kinase-like ATPases CJZ71_09690 SM00028 Tetratricopeptide repeats CJZ71_09720 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_09730 SM00710 Parallel beta-helix repeats CJZ71_09730 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CJZ71_09760 SM00938 Nitrogen regulatory protein P-II CJZ71_09765 SM00014 Acid phosphatase homologues CJZ71_09800 SM00155 Phospholipase D. Active site motifs. CJZ71_09805 SM00422 helix_turn_helix, mercury resistance CJZ71_09860 SM00028 Tetratricopeptide repeats CJZ71_09870 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_09885 SM00327 von Willebrand factor (vWF) type A domain CJZ71_09895 SM00327 von Willebrand factor (vWF) type A domain CJZ71_09930 SM00382 ATPases associated with a variety of cellular activities CJZ71_09995 SM00226 Low molecular weight phosphatase family CJZ71_10035 SM00937 CJZ71_10035 CJZ71_10055 SM00919 Malic enzyme, NAD binding domain CJZ71_10055 SM01274 CJZ71_10055 CJZ71_10070 SM00357 Cold shock protein domain CJZ71_10070 SM00382 ATPases associated with a variety of cellular activities CJZ71_10070 SM00959 Rho termination factor, N-terminal domain CJZ71_10095 SM00448 cheY-homologous receiver domain CJZ71_10130 SM00155 Phospholipase D. Active site motifs. CJZ71_10150 SM00836 DALR anticodon binding domain CJZ71_10150 SM01016 Arginyl tRNA synthetase N terminal dom CJZ71_10170 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_10220 SM00028 Tetratricopeptide repeats CJZ71_10270 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_10275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CJZ71_10295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_10390 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJZ71_10430 SM00858 CJZ71_10430 CJZ71_10485 SM00986 Uracil DNA glycosylase superfamily CJZ71_10485 SM00987 UreE urease accessory protein, C-terminal domain CJZ71_10505 SM00640 Glycosyl hydrolases family 32 CJZ71_10520 SM01061 CAT RNA binding domain CJZ71_10675 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CJZ71_10705 SM01061 CAT RNA binding domain CJZ71_10720 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_10725 SM00363 S4 RNA-binding domain CJZ71_10735 SM00954 Region found in RelA / SpoT proteins CJZ71_10825 SM01060 CJZ71_10825 CJZ71_10840 SM00382 ATPases associated with a variety of cellular activities CJZ71_10875 SM00382 ATPases associated with a variety of cellular activities CJZ71_10880 SM00382 ATPases associated with a variety of cellular activities CJZ71_10915 SM00382 ATPases associated with a variety of cellular activities CJZ71_10955 SM00421 helix_turn_helix, Lux Regulon CJZ71_10955 SM00448 cheY-homologous receiver domain CJZ71_10990 SM00882 Coenzyme A transferase CJZ71_10995 SM00882 Coenzyme A transferase CJZ71_11025 SM01060 CJZ71_11025 CJZ71_11040 SM01061 CAT RNA binding domain CJZ71_11055 SM00487 DEAD-like helicases superfamily CJZ71_11055 SM00490 helicase superfamily c-terminal domain CJZ71_11205 SM00860 SMI1 / KNR4 family CJZ71_11225 SM00487 DEAD-like helicases superfamily CJZ71_11225 SM00490 helicase superfamily c-terminal domain CJZ71_11255 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CJZ71_11265 SM01133 CJZ71_11265 CJZ71_11295 SM00382 ATPases associated with a variety of cellular activities CJZ71_11305 SM00062 Bacterial periplasmic substrate-binding proteins CJZ71_11370 SM00382 ATPases associated with a variety of cellular activities CJZ71_11375 SM00387 Histidine kinase-like ATPases CJZ71_11380 SM00448 cheY-homologous receiver domain CJZ71_11380 SM00862 Transcriptional regulatory protein, C terminal CJZ71_11435 SM00420 helix_turn_helix, Deoxyribose operon repressor CJZ71_11435 SM01134 CJZ71_11435 CJZ71_11470 SM00387 Histidine kinase-like ATPases CJZ71_11530 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_11555 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_11555 SM00895 CJZ71_11555 CJZ71_11570 SM01350 CJZ71_11570 CJZ71_11600 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_11600 SM00866 CJZ71_11600 CJZ71_11610 SM00382 ATPases associated with a variety of cellular activities CJZ71_11645 SM00382 ATPases associated with a variety of cellular activities CJZ71_11700 SM00487 DEAD-like helicases superfamily CJZ71_11700 SM00490 helicase superfamily c-terminal domain CJZ71_11785 SM00752 Horizontally Transferred TransMembrane Domain CJZ71_11800 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_11805 SM00091 PAS domain CJZ71_11805 SM00382 ATPases associated with a variety of cellular activities CJZ71_11815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_11820 SM00849 Metallo-beta-lactamase superfamily CJZ71_11835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CJZ71_11835 SM00091 PAS domain CJZ71_11835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_11835 SM00387 Histidine kinase-like ATPases CJZ71_11835 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_11840 SM00448 cheY-homologous receiver domain CJZ71_11840 SM00862 Transcriptional regulatory protein, C terminal CJZ71_11865 SM00788 Adenylosuccinate synthetase CJZ71_11875 SM00382 ATPases associated with a variety of cellular activities CJZ71_11910 SM00267 diguanylate cyclase CJZ71_11935 SM01131 CJZ71_11935 CJZ71_11955 SM00422 helix_turn_helix, mercury resistance CJZ71_11985 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_12020 SM00871 Bacterial transcription activator, effector binding domain CJZ71_12040 SM01266 CJZ71_12040 CJZ71_12080 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CJZ71_12105 SM00470 ParB-like nuclease domain CJZ71_12120 SM00470 ParB-like nuclease domain CJZ71_12130 SM01228 CJZ71_12130 CJZ71_12140 SM00322 K homology RNA-binding domain CJZ71_12140 SM00393 Putative single-stranded nucleic acids-binding domain CJZ71_12140 SM01245 CJZ71_12140 CJZ71_12160 SM00382 ATPases associated with a variety of cellular activities CJZ71_12160 SM00760 Bacterial dnaA protein helix-turn-helix domain CJZ71_12165 SM00480 DNA polymerase III beta subunit CJZ71_12185 SM00387 Histidine kinase-like ATPases CJZ71_12185 SM00433 TopoisomeraseII CJZ71_12190 SM00434 DNA Topoisomerase IV CJZ71_12225 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_12225 SM01240 CJZ71_12225 CJZ71_12230 SM00936 Penicillin-binding protein 5, C-terminal domain CJZ71_12265 SM00257 Lysin motif CJZ71_12265 SM00636 CJZ71_12265 CJZ71_12285 SM00382 ATPases associated with a variety of cellular activities CJZ71_12295 SM00493 CJZ71_12295 CJZ71_12390 SM00465 GIY-YIG type nucleases (URI domain) CJZ71_12400 SM00966 SpoVT / AbrB like domain CJZ71_12415 SM01208 CJZ71_12415 CJZ71_12420 SM00493 CJZ71_12420 CJZ71_12425 SM00650 Ribosomal RNA adenine dimethylases CJZ71_12470 SM01400 CJZ71_12470 CJZ71_12490 SM00487 DEAD-like helicases superfamily CJZ71_12490 SM00490 helicase superfamily c-terminal domain CJZ71_12490 SM00982 CJZ71_12490 CJZ71_12490 SM01058 CarD-like/TRCF domain CJZ71_12495 SM00966 SpoVT / AbrB like domain CJZ71_12510 SM00363 S4 RNA-binding domain CJZ71_12530 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_12545 SM00331 Sigma factor PP2C-like phosphatases CJZ71_12545 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CJZ71_12555 SM00220 Serine/Threonine protein kinases, catalytic domain CJZ71_12560 SM00977 TilS substrate C-terminal domain CJZ71_12570 SM00382 ATPases associated with a variety of cellular activities CJZ71_12625 SM00905 Dihydroneopterin aldolase CJZ71_12635 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_12740 SM00382 ATPases associated with a variety of cellular activities CJZ71_12740 SM01086 C-terminal, D2-small domain, of ClpB protein CJZ71_12745 SM00382 ATPases associated with a variety of cellular activities CJZ71_12755 SM00670 Large family of predicted nucleotide-binding domains CJZ71_12785 SM00840 CJZ71_12785 CJZ71_12790 SM00535 Ribonuclease III family CJZ71_12795 SM00967 RNA 2'-O ribose methyltransferase substrate binding CJZ71_12820 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CJZ71_12820 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CJZ71_12825 SM00649 Ribosomal protein L11/L12 CJZ71_12855 SM00663 RNA polymerase I subunit A N-terminus CJZ71_12875 SM00838 Elongation factor G C-terminus CJZ71_12875 SM00889 Elongation factor G, domain IV CJZ71_12890 SM01403 CJZ71_12890 CJZ71_12910 SM01382 CJZ71_12910 CJZ71_12910 SM01383 CJZ71_12910 CJZ71_12925 SM00322 K homology RNA-binding domain CJZ71_12945 SM01374 CJZ71_12945 CJZ71_12950 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CJZ71_13015 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_13035 SM00662 RNA polymerases D CJZ71_13045 SM00382 ATPases associated with a variety of cellular activities CJZ71_13050 SM00382 ATPases associated with a variety of cellular activities CJZ71_13085 SM00646 CJZ71_13085 CJZ71_13100 SM01251 CJZ71_13100 CJZ71_13220 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_13325 SM00822 CJZ71_13325 CJZ71_13325 SM00823 Phosphopantetheine attachment site CJZ71_13325 SM00825 Beta-ketoacyl synthase CJZ71_13330 SM00822 CJZ71_13330 CJZ71_13330 SM00823 Phosphopantetheine attachment site CJZ71_13330 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CJZ71_13340 SM00849 Metallo-beta-lactamase superfamily CJZ71_13460 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_13490 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_13505 SM00257 Lysin motif CJZ71_13560 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_13565 SM00450 Rhodanese Homology Domain CJZ71_13585 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_13585 SM00866 CJZ71_13585 CJZ71_13625 SM00387 Histidine kinase-like ATPases CJZ71_13630 SM00448 cheY-homologous receiver domain CJZ71_13640 SM01130 CJZ71_13640 CJZ71_13655 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CJZ71_13660 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_13660 SM00895 CJZ71_13660 CJZ71_13665 SM00858 CJZ71_13665 CJZ71_13685 SM00448 cheY-homologous receiver domain CJZ71_13685 SM00862 Transcriptional regulatory protein, C terminal CJZ71_13690 SM00387 Histidine kinase-like ATPases CJZ71_13690 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_13695 SM00382 ATPases associated with a variety of cellular activities CJZ71_13720 SM00327 von Willebrand factor (vWF) type A domain CJZ71_13765 SM00870 CJZ71_13765 CJZ71_13785 SM00387 Histidine kinase-like ATPases CJZ71_13790 SM00448 cheY-homologous receiver domain CJZ71_13790 SM00850 LytTr DNA-binding domain CJZ71_13795 SM00382 ATPases associated with a variety of cellular activities CJZ71_13830 SM00028 Tetratricopeptide repeats CJZ71_13840 SM00642 Alpha-amylase domain CJZ71_13850 SM00382 ATPases associated with a variety of cellular activities CJZ71_13965 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_13970 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_13970 SM00382 ATPases associated with a variety of cellular activities CJZ71_14130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CJZ71_14170 SM00062 Bacterial periplasmic substrate-binding proteins CJZ71_14190 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_14230 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CJZ71_14240 SM00823 Phosphopantetheine attachment site CJZ71_14240 SM01294 CJZ71_14240 CJZ71_14245 SM00823 Phosphopantetheine attachment site CJZ71_14245 SM01294 CJZ71_14245 CJZ71_14250 SM00823 Phosphopantetheine attachment site CJZ71_14280 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_14295 SM00382 ATPases associated with a variety of cellular activities CJZ71_14305 SM00062 Bacterial periplasmic substrate-binding proteins CJZ71_14345 SM00710 Parallel beta-helix repeats CJZ71_14345 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CJZ71_14375 SM00382 ATPases associated with a variety of cellular activities CJZ71_14385 SM00448 cheY-homologous receiver domain CJZ71_14385 SM00862 Transcriptional regulatory protein, C terminal CJZ71_14390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_14390 SM00387 Histidine kinase-like ATPases CJZ71_14390 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_14395 SM00028 Tetratricopeptide repeats CJZ71_14430 SM00382 ATPases associated with a variety of cellular activities CJZ71_14460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_14465 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_14500 SM00420 helix_turn_helix, Deoxyribose operon repressor CJZ71_14525 SM01329 CJZ71_14525 CJZ71_14575 SM00796 Allophanate hydrolase subunit 1 CJZ71_14580 SM00797 Allophanate hydrolase subunit 2 CJZ71_14585 SM00346 helix_turn_helix isocitrate lyase regulation CJZ71_14660 SM00344 helix_turn_helix ASNC type CJZ71_14665 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CJZ71_14665 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CJZ71_14665 SM00493 CJZ71_14665 CJZ71_14685 SM00752 Horizontally Transferred TransMembrane Domain CJZ71_14745 SM00091 PAS domain CJZ71_14745 SM00387 Histidine kinase-like ATPases CJZ71_14750 SM00448 cheY-homologous receiver domain CJZ71_14765 SM00382 ATPases associated with a variety of cellular activities CJZ71_14820 SM00487 DEAD-like helicases superfamily CJZ71_14820 SM00490 helicase superfamily c-terminal domain CJZ71_14850 SM01005 Alanine racemase, C-terminal domain CJZ71_14875 SM00387 Histidine kinase-like ATPases CJZ71_14880 SM00331 Sigma factor PP2C-like phosphatases CJZ71_14900 SM00331 Sigma factor PP2C-like phosphatases CJZ71_14900 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CJZ71_14905 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_14905 SM00732 Likely ribonuclease with RNase H fold. CJZ71_14915 SM00731 SprT homologues. CJZ71_14980 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_15010 SM00357 Cold shock protein domain CJZ71_15015 SM01058 CarD-like/TRCF domain CJZ71_15035 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_15045 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_15045 SM00871 Bacterial transcription activator, effector binding domain CJZ71_15050 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_15090 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_15115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_15140 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_15155 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_15175 SM00387 Histidine kinase-like ATPases CJZ71_15180 SM00421 helix_turn_helix, Lux Regulon CJZ71_15180 SM00448 cheY-homologous receiver domain CJZ71_15205 SM00422 helix_turn_helix, mercury resistance CJZ71_15205 SM00871 Bacterial transcription activator, effector binding domain CJZ71_15300 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_15315 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_15315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CJZ71_15330 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_15330 SM00895 CJZ71_15330 CJZ71_15335 SM00257 Lysin motif CJZ71_15335 SM00636 CJZ71_15335 CJZ71_15350 SM00098 Alkaline phosphatase homologues CJZ71_15370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_15405 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_15405 SM00866 CJZ71_15405 CJZ71_15490 SM00382 ATPases associated with a variety of cellular activities CJZ71_15500 SM00881 CoA binding domain CJZ71_15530 SM00883 Chaperonin 10 Kd subunit CJZ71_15550 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_15555 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_15570 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_15615 SM00382 ATPases associated with a variety of cellular activities CJZ71_15680 SM00507 HNH nucleases CJZ71_15765 SM00047 Lysozyme subfamily 2 CJZ71_15800 SM00257 Lysin motif CJZ71_15800 SM00644 CJZ71_15800 CJZ71_15860 SM00028 Tetratricopeptide repeats CJZ71_15860 SM00382 ATPases associated with a variety of cellular activities CJZ71_15865 SM00829 Enoylreductase CJZ71_15910 SM00829 Enoylreductase CJZ71_15980 SM00460 Transglutaminase/protease-like homologues CJZ71_16030 SM01001 AIR carboxylase CJZ71_16040 SM00998 Adenylosuccinate lyase C-terminus CJZ71_16055 SM01211 CJZ71_16055 CJZ71_16080 SM00798 AICARFT/IMPCHase bienzyme CJZ71_16080 SM00851 MGS-like domain CJZ71_16085 SM01209 CJZ71_16085 CJZ71_16085 SM01210 CJZ71_16085 CJZ71_16090 SM00344 helix_turn_helix ASNC type CJZ71_16135 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CJZ71_16135 SM00292 breast cancer carboxy-terminal domain CJZ71_16135 SM00532 Ligase N family CJZ71_16170 SM00845 GatB domain CJZ71_16185 SM00046 Diacylglycerol kinase catalytic domain (presumed) CJZ71_16200 SM00487 DEAD-like helicases superfamily CJZ71_16200 SM00490 helicase superfamily c-terminal domain CJZ71_16220 SM00028 Tetratricopeptide repeats CJZ71_16260 SM00028 Tetratricopeptide repeats CJZ71_16325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_16325 SM00387 Histidine kinase-like ATPases CJZ71_16355 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_16525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJZ71_16530 SM00382 ATPases associated with a variety of cellular activities CJZ71_16540 SM00422 helix_turn_helix, mercury resistance CJZ71_16560 SM00382 ATPases associated with a variety of cellular activities CJZ71_16565 SM00487 DEAD-like helicases superfamily CJZ71_16565 SM00490 helicase superfamily c-terminal domain CJZ71_16580 SM00829 Enoylreductase CJZ71_16585 SM00382 ATPases associated with a variety of cellular activities CJZ71_16620 SM00656 CJZ71_16620 CJZ71_16630 SM00387 Histidine kinase-like ATPases CJZ71_16635 SM00448 cheY-homologous receiver domain CJZ71_16650 SM00849 Metallo-beta-lactamase superfamily CJZ71_16725 SM00642 Alpha-amylase domain CJZ71_16730 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_16730 SM00866 CJZ71_16730 CJZ71_16760 SM00226 Low molecular weight phosphatase family CJZ71_16820 SM00478 endonuclease III CJZ71_16855 SM00861 Transketolase, pyrimidine binding domain CJZ71_16870 SM00382 ATPases associated with a variety of cellular activities CJZ71_16925 SM00382 ATPases associated with a variety of cellular activities CJZ71_16930 SM00382 ATPases associated with a variety of cellular activities CJZ71_16945 SM00387 Histidine kinase-like ATPases CJZ71_16950 SM00421 helix_turn_helix, Lux Regulon CJZ71_16950 SM00448 cheY-homologous receiver domain CJZ71_16955 SM00382 ATPases associated with a variety of cellular activities CJZ71_17005 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_17080 SM00287 Bacterial SH3 domain homologues CJZ71_17110 SM00478 endonuclease III CJZ71_17110 SM00525 CJZ71_17110 CJZ71_17140 SM00382 ATPases associated with a variety of cellular activities CJZ71_17320 SM01060 CJZ71_17320 CJZ71_17325 SM00382 ATPases associated with a variety of cellular activities CJZ71_17330 SM00062 Bacterial periplasmic substrate-binding proteins CJZ71_17360 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_17375 SM00567 E-Z type HEAT repeats CJZ71_17405 SM00763 PrkA AAA domain CJZ71_17415 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_17450 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_17455 SM00382 ATPases associated with a variety of cellular activities CJZ71_17460 SM00382 ATPases associated with a variety of cellular activities CJZ71_17470 SM00357 Cold shock protein domain CJZ71_17485 SM00267 diguanylate cyclase CJZ71_17545 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_17600 SM00028 Tetratricopeptide repeats CJZ71_17625 SM00318 Staphylococcal nuclease homologues CJZ71_17635 SM00363 S4 RNA-binding domain CJZ71_17645 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_17690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CJZ71_17690 SM00387 Histidine kinase-like ATPases CJZ71_17695 SM00421 helix_turn_helix, Lux Regulon CJZ71_17695 SM00448 cheY-homologous receiver domain CJZ71_17715 SM00257 Lysin motif CJZ71_17745 SM00098 Alkaline phosphatase homologues CJZ71_17750 SM00257 Lysin motif CJZ71_17780 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_17810 SM00563 Phosphate acyltransferases CJZ71_17815 SM01091 Transporter associated domain CJZ71_17820 SM00422 helix_turn_helix, mercury resistance CJZ71_17830 SM01091 Transporter associated domain CJZ71_17890 SM00382 ATPases associated with a variety of cellular activities CJZ71_17895 SM00382 ATPases associated with a variety of cellular activities CJZ71_17950 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_17980 SM00382 ATPases associated with a variety of cellular activities CJZ71_18000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_18040 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_18075 SM00382 ATPases associated with a variety of cellular activities CJZ71_18170 SM01022 CJZ71_18170 CJZ71_18185 SM00849 Metallo-beta-lactamase superfamily CJZ71_18230 SM00829 Enoylreductase CJZ71_18245 SM00855 Phosphoglycerate mutase family CJZ71_18265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJZ71_18280 SM00914 CJZ71_18280 CJZ71_18295 SM00894 Excalibur calcium-binding domain CJZ71_18330 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_18365 SM00354 helix_turn _helix lactose operon repressor CJZ71_18500 SM00342 helix_turn_helix, arabinose operon control protein CJZ71_18505 SM00354 helix_turn _helix lactose operon repressor CJZ71_18525 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_18560 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_18570 SM00752 Horizontally Transferred TransMembrane Domain CJZ71_18650 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJZ71_18670 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CJZ71_18675 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJZ71_18730 SM00825 Beta-ketoacyl synthase CJZ71_18740 SM00382 ATPases associated with a variety of cellular activities CJZ71_18745 SM00382 ATPases associated with a variety of cellular activities CJZ71_18790 SM00382 ATPases associated with a variety of cellular activities CJZ71_18795 SM00382 ATPases associated with a variety of cellular activities CJZ71_18860 SM01118 CJZ71_18860 CJZ71_18870 SM00954 Region found in RelA / SpoT proteins CJZ71_19060 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_19100 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_19295 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CJZ71_19295 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJZ71_19350 SM00382 ATPases associated with a variety of cellular activities CJZ71_19390 SM00829 Enoylreductase CJZ71_19410 SM00354 helix_turn _helix lactose operon repressor CJZ71_19420 SM00858 CJZ71_19420 CJZ71_19455 SM00028 Tetratricopeptide repeats CJZ71_19470 SM00257 Lysin motif CJZ71_19470 SM00644 CJZ71_19470 CJZ71_19495 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_19510 SM00382 ATPases associated with a variety of cellular activities CJZ71_19610 SM00257 Lysin motif CJZ71_19675 SM00257 Lysin motif CJZ71_19675 SM00644 CJZ71_19675 CJZ71_19725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_19750 SM00382 ATPases associated with a variety of cellular activities CJZ71_19765 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CJZ71_19775 SM00382 ATPases associated with a variety of cellular activities CJZ71_19835 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CJZ71_19850 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_19890 SM00382 ATPases associated with a variety of cellular activities CJZ71_19905 SM00448 cheY-homologous receiver domain CJZ71_19905 SM00862 Transcriptional regulatory protein, C terminal CJZ71_19910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_19910 SM00387 Histidine kinase-like ATPases CJZ71_19910 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_19935 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_19935 SM00924 MgtE intracellular N domain CJZ71_19940 SM00422 helix_turn_helix, mercury resistance CJZ71_19955 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_19990 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CJZ71_19995 SM00052 Putative diguanylate phosphodiesterase CJZ71_19995 SM00267 diguanylate cyclase CJZ71_20055 SM00091 PAS domain CJZ71_20055 SM00387 Histidine kinase-like ATPases CJZ71_20055 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_20095 SM01007 Class II Aldolase and Adducin N-terminal domain CJZ71_20120 SM00387 Histidine kinase-like ATPases CJZ71_20120 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_20125 SM00347 helix_turn_helix multiple antibiotic resistance protein CJZ71_20140 SM00382 ATPases associated with a variety of cellular activities CJZ71_20140 SM01086 C-terminal, D2-small domain, of ClpB protein CJZ71_20215 SM00354 helix_turn _helix lactose operon repressor CJZ71_20220 SM01061 CAT RNA binding domain CJZ71_20255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CJZ71_20255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CJZ71_20300 SM00387 Histidine kinase-like ATPases CJZ71_20315 SM00260 Two component signalling adaptor domain CJZ71_20315 SM00448 cheY-homologous receiver domain CJZ71_20330 SM00257 Lysin motif CJZ71_20345 SM00052 Putative diguanylate phosphodiesterase CJZ71_20445 SM00852 Probable molybdopterin binding domain CJZ71_20465 SM00382 ATPases associated with a variety of cellular activities CJZ71_20470 SM00382 ATPases associated with a variety of cellular activities CJZ71_20485 SM00382 ATPases associated with a variety of cellular activities CJZ71_20490 SM01066 Carbohydrate binding domain CJZ71_20495 SM00420 helix_turn_helix, Deoxyribose operon repressor CJZ71_20495 SM01134 CJZ71_20495 CJZ71_20520 SM00382 ATPases associated with a variety of cellular activities CJZ71_20550 SM00966 SpoVT / AbrB like domain CJZ71_20560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CJZ71_20560 SM00091 PAS domain CJZ71_20560 SM00387 Histidine kinase-like ATPases CJZ71_20560 SM00388 His Kinase A (phosphoacceptor) domain CJZ71_20580 SM00849 Metallo-beta-lactamase superfamily CJZ71_20615 SM00861 Transketolase, pyrimidine binding domain CJZ71_20720 SM00838 Elongation factor G C-terminus CJZ71_20740 SM00670 Large family of predicted nucleotide-binding domains CJZ71_20765 SM00878 Biotin carboxylase C-terminal domain CJZ71_20815 SM00116 Domain in cystathionine beta-synthase and other proteins. CJZ71_20865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_20925 SM00740 CJZ71_20925 CJZ71_20930 SM00740 CJZ71_20930 CJZ71_20985 SM00842 Cell division protein FtsA CJZ71_20990 SM00864 Tubulin/FtsZ family, GTPase domain CJZ71_20990 SM00865 Tubulin/FtsZ family, C-terminal domain CJZ71_21015 SM00382 ATPases associated with a variety of cellular activities CJZ71_21050 SM00363 S4 RNA-binding domain CJZ71_21080 SM00363 S4 RNA-binding domain CJZ71_21105 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CJZ71_21110 SM00851 MGS-like domain CJZ71_21110 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJZ71_21110 SM01209 CJZ71_21110 CJZ71_21125 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CJZ71_21175 SM00831 Cation transporter/ATPase, N-terminus CJZ71_21190 SM00072 Guanylate kinase homologues. CJZ71_21195 SM01409 CJZ71_21195 CJZ71_21205 SM00487 DEAD-like helicases superfamily CJZ71_21205 SM00490 helicase superfamily c-terminal domain CJZ71_21230 SM00331 Sigma factor PP2C-like phosphatases CJZ71_21230 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CJZ71_21235 SM00220 Serine/Threonine protein kinases, catalytic domain CJZ71_21235 SM00740 CJZ71_21235 CJZ71_21250 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CJZ71_21270 SM01120 CJZ71_21270 CJZ71_21270 SM01121 CJZ71_21270 CJZ71_21285 SM00487 DEAD-like helicases superfamily CJZ71_21285 SM00490 helicase superfamily c-terminal domain CJZ71_21300 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CJZ71_21305 SM00822 CJZ71_21305 CJZ71_21315 SM00358 Double-stranded RNA binding motif CJZ71_21315 SM00535 Ribonuclease III family CJZ71_21320 SM00968 SMC proteins Flexible Hinge Domain CJZ71_21325 SM00382 ATPases associated with a variety of cellular activities CJZ71_21325 SM00962 SRP54-type protein, GTPase domain CJZ71_21325 SM00963 SRP54-type protein, helical bundle domain CJZ71_21340 SM00382 ATPases associated with a variety of cellular activities CJZ71_21340 SM00962 SRP54-type protein, GTPase domain CJZ71_21340 SM00963 SRP54-type protein, helical bundle domain CJZ71_21400 SM00881 CoA binding domain CJZ71_21410 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CJZ71_21410 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CJZ71_21410 SM00493 CJZ71_21410 CJZ71_21430 SM00382 ATPases associated with a variety of cellular activities CJZ71_21430 SM01086 C-terminal, D2-small domain, of ClpB protein CJZ71_21475 SM00382 ATPases associated with a variety of cellular activities CJZ71_21525 SM00448 cheY-homologous receiver domain CJZ71_21560 SM00962 SRP54-type protein, GTPase domain CJZ71_21570 SM00448 cheY-homologous receiver domain CJZ71_21575 SM00073 Histidine Phosphotransfer domain CJZ71_21575 SM00260 Two component signalling adaptor domain CJZ71_21575 SM00387 Histidine kinase-like ATPases CJZ71_21575 SM01231 CJZ71_21575 CJZ71_21580 SM00260 Two component signalling adaptor domain CJZ71_21640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CJZ71_21650 SM00479 CJZ71_21650 CJZ71_21650 SM00481 DNA polymerase alpha chain like domain CJZ71_21660 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_21660 SM00322 K homology RNA-binding domain CJZ71_21695 SM00904 Riboflavin kinase CJZ71_21700 SM01387 CJZ71_21700 CJZ71_21705 SM00316 Ribosomal protein S1-like RNA-binding domain CJZ71_21705 SM00322 K homology RNA-binding domain CJZ71_21735 SM00859 Semialdehyde dehydrogenase, NAD binding domain CJZ71_21745 SM01130 CJZ71_21745 CJZ71_21750 SM00849 Metallo-beta-lactamase superfamily CJZ71_21765 SM00382 ATPases associated with a variety of cellular activities CJZ71_21765 SM00843 CJZ71_21765 CJZ71_21770 SM00345 helix_turn_helix gluconate operon transcriptional repressor CJZ71_21770 SM00866 CJZ71_21770 CJZ71_21805 SM00530 Helix-turn-helix XRE-family like proteins CJZ71_21815 SM00852 Probable molybdopterin binding domain CJZ71_21820 SM00382 ATPases associated with a variety of cellular activities CJZ71_21830 SM00322 K homology RNA-binding domain CJZ71_21830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CJZ71_21845 SM00829 Enoylreductase CJZ71_21860 SM00729 Elongator protein 3, MiaB family, Radical SAM CJZ71_21875 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CJZ71_21875 SM00534 ATPase domain of DNA mismatch repair MUTS family CJZ71_21880 SM00853 MutL C terminal dimerisation domain CJZ71_21880 SM01340 CJZ71_21880 CJZ71_21945 SM00507 HNH nucleases CJZ71_21990 SM00849 Metallo-beta-lactamase superfamily CJZ71_22075 SM00646 CJZ71_22075 CJZ71_22085 SM00382 ATPases associated with a variety of cellular activities CJZ71_22100 SM00422 helix_turn_helix, mercury resistance CJZ71_22105 SM01230 CJZ71_22105 CJZ71_22160 SM00860 SMI1 / KNR4 family