A4A60_00005 SM00382 ATPases associated with a variety of cellular activities A4A60_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A4A60_00010 SM00480 DNA polymerase III beta subunit A4A60_00030 SM00387 Histidine kinase-like ATPases A4A60_00030 SM00433 TopoisomeraseII A4A60_00035 SM00434 DNA Topoisomerase IV A4A60_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_00070 SM01240 A4A60_00070 A4A60_00075 SM00936 Penicillin-binding protein 5, C-terminal domain A4A60_00110 SM00257 Lysin motif A4A60_00110 SM00636 A4A60_00110 A4A60_00130 SM00382 ATPases associated with a variety of cellular activities A4A60_00140 SM00493 A4A60_00140 A4A60_00235 SM00465 GIY-YIG type nucleases (URI domain) A4A60_00250 SM00966 SpoVT / AbrB like domain A4A60_00265 SM01208 A4A60_00265 A4A60_00270 SM00493 A4A60_00270 A4A60_00275 SM00650 Ribosomal RNA adenine dimethylases A4A60_00325 SM01400 A4A60_00325 A4A60_00345 SM00487 DEAD-like helicases superfamily A4A60_00345 SM00490 helicase superfamily c-terminal domain A4A60_00345 SM00982 A4A60_00345 A4A60_00345 SM01058 CarD-like/TRCF domain A4A60_00350 SM00966 SpoVT / AbrB like domain A4A60_00365 SM00363 S4 RNA-binding domain A4A60_00385 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_00400 SM00331 Sigma factor PP2C-like phosphatases A4A60_00400 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A4A60_00410 SM00220 Serine/Threonine protein kinases, catalytic domain A4A60_00415 SM00977 TilS substrate C-terminal domain A4A60_00425 SM00382 ATPases associated with a variety of cellular activities A4A60_00470 SM00905 Dihydroneopterin aldolase A4A60_00480 SM00530 Helix-turn-helix XRE-family like proteins A4A60_00585 SM00382 ATPases associated with a variety of cellular activities A4A60_00585 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_00590 SM00382 ATPases associated with a variety of cellular activities A4A60_00600 SM00670 Large family of predicted nucleotide-binding domains A4A60_00630 SM00840 A4A60_00630 A4A60_00635 SM00535 Ribonuclease III family A4A60_00640 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4A60_00665 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A4A60_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4A60_00670 SM00649 Ribosomal protein L11/L12 A4A60_00700 SM00663 RNA polymerase I subunit A N-terminus A4A60_00720 SM00838 Elongation factor G C-terminus A4A60_00720 SM00889 Elongation factor G, domain IV A4A60_00735 SM01403 A4A60_00735 A4A60_00755 SM01382 A4A60_00755 A4A60_00755 SM01383 A4A60_00755 A4A60_00770 SM00322 K homology RNA-binding domain A4A60_00790 SM01374 A4A60_00790 A4A60_00795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4A60_00860 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_00880 SM00662 RNA polymerases D A4A60_00890 SM00382 ATPases associated with a variety of cellular activities A4A60_00895 SM00382 ATPases associated with a variety of cellular activities A4A60_00930 SM00646 A4A60_00930 A4A60_00945 SM01251 A4A60_00945 A4A60_01065 SM00342 helix_turn_helix, arabinose operon control protein A4A60_01170 SM00822 A4A60_01170 A4A60_01170 SM00823 Phosphopantetheine attachment site A4A60_01170 SM00825 Beta-ketoacyl synthase A4A60_01175 SM00822 A4A60_01175 A4A60_01175 SM00823 Phosphopantetheine attachment site A4A60_01175 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4A60_01185 SM00849 Metallo-beta-lactamase superfamily A4A60_01300 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_01330 SM00342 helix_turn_helix, arabinose operon control protein A4A60_01400 SM00342 helix_turn_helix, arabinose operon control protein A4A60_01405 SM00450 Rhodanese Homology Domain A4A60_01430 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_01430 SM00866 A4A60_01430 A4A60_01470 SM00387 Histidine kinase-like ATPases A4A60_01475 SM00448 cheY-homologous receiver domain A4A60_01480 SM01130 A4A60_01480 A4A60_01495 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4A60_01500 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_01500 SM00895 A4A60_01500 A4A60_01505 SM00858 A4A60_01505 A4A60_01525 SM00448 cheY-homologous receiver domain A4A60_01525 SM00862 Transcriptional regulatory protein, C terminal A4A60_01530 SM00387 Histidine kinase-like ATPases A4A60_01530 SM00388 His Kinase A (phosphoacceptor) domain A4A60_01535 SM00382 ATPases associated with a variety of cellular activities A4A60_01605 SM00870 A4A60_01605 A4A60_01625 SM00387 Histidine kinase-like ATPases A4A60_01630 SM00448 cheY-homologous receiver domain A4A60_01630 SM00850 LytTr DNA-binding domain A4A60_01635 SM00382 ATPases associated with a variety of cellular activities A4A60_01670 SM00028 Tetratricopeptide repeats A4A60_01680 SM00642 Alpha-amylase domain A4A60_01690 SM00382 ATPases associated with a variety of cellular activities A4A60_01790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_01795 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_01795 SM00382 ATPases associated with a variety of cellular activities A4A60_01950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_01990 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_02010 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_02050 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4A60_02070 SM00823 Phosphopantetheine attachment site A4A60_02070 SM01294 A4A60_02070 A4A60_02075 SM00823 Phosphopantetheine attachment site A4A60_02075 SM01294 A4A60_02075 A4A60_02080 SM00823 Phosphopantetheine attachment site A4A60_02105 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_02120 SM00382 ATPases associated with a variety of cellular activities A4A60_02130 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_02170 SM00710 Parallel beta-helix repeats A4A60_02170 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A4A60_02200 SM00382 ATPases associated with a variety of cellular activities A4A60_02210 SM00448 cheY-homologous receiver domain A4A60_02210 SM00862 Transcriptional regulatory protein, C terminal A4A60_02215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_02215 SM00387 Histidine kinase-like ATPases A4A60_02215 SM00388 His Kinase A (phosphoacceptor) domain A4A60_02220 SM00028 Tetratricopeptide repeats A4A60_02250 SM00382 ATPases associated with a variety of cellular activities A4A60_02280 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_02285 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_02320 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_02345 SM01329 A4A60_02345 A4A60_02400 SM00796 Allophanate hydrolase subunit 1 A4A60_02405 SM00797 Allophanate hydrolase subunit 2 A4A60_02410 SM00346 helix_turn_helix isocitrate lyase regulation A4A60_02485 SM00344 helix_turn_helix ASNC type A4A60_02490 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4A60_02490 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4A60_02490 SM00493 A4A60_02490 A4A60_02510 SM00752 Horizontally Transferred TransMembrane Domain A4A60_02570 SM00091 PAS domain A4A60_02570 SM00387 Histidine kinase-like ATPases A4A60_02575 SM00448 cheY-homologous receiver domain A4A60_02595 SM00382 ATPases associated with a variety of cellular activities A4A60_02645 SM00487 DEAD-like helicases superfamily A4A60_02645 SM00490 helicase superfamily c-terminal domain A4A60_02675 SM01005 Alanine racemase, C-terminal domain A4A60_02700 SM00387 Histidine kinase-like ATPases A4A60_02705 SM00331 Sigma factor PP2C-like phosphatases A4A60_02725 SM00331 Sigma factor PP2C-like phosphatases A4A60_02725 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A4A60_02730 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_02730 SM00732 Likely ribonuclease with RNase H fold. A4A60_02740 SM00731 SprT homologues. A4A60_02805 SM00530 Helix-turn-helix XRE-family like proteins A4A60_02835 SM00357 Cold shock protein domain A4A60_02840 SM01058 CarD-like/TRCF domain A4A60_02855 SM00342 helix_turn_helix, arabinose operon control protein A4A60_02865 SM00342 helix_turn_helix, arabinose operon control protein A4A60_02865 SM00871 Bacterial transcription activator, effector binding domain A4A60_02870 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_02910 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_02935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_02960 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_02975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_02990 SM00387 Histidine kinase-like ATPases A4A60_02995 SM00421 helix_turn_helix, Lux Regulon A4A60_02995 SM00448 cheY-homologous receiver domain A4A60_03020 SM00422 helix_turn_helix, mercury resistance A4A60_03020 SM00871 Bacterial transcription activator, effector binding domain A4A60_03105 SM00382 ATPases associated with a variety of cellular activities A4A60_03120 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_03135 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_03135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_03150 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_03150 SM00895 A4A60_03150 A4A60_03155 SM00257 Lysin motif A4A60_03155 SM00636 A4A60_03155 A4A60_03170 SM00098 Alkaline phosphatase homologues A4A60_03190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_03225 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_03225 SM00866 A4A60_03225 A4A60_03310 SM00382 ATPases associated with a variety of cellular activities A4A60_03320 SM00881 CoA binding domain A4A60_03345 SM00883 Chaperonin 10 Kd subunit A4A60_03365 SM00530 Helix-turn-helix XRE-family like proteins A4A60_03370 SM00530 Helix-turn-helix XRE-family like proteins A4A60_03385 SM00530 Helix-turn-helix XRE-family like proteins A4A60_03430 SM00382 ATPases associated with a variety of cellular activities A4A60_03490 SM00507 HNH nucleases A4A60_03575 SM00047 Lysozyme subfamily 2 A4A60_03605 SM00257 Lysin motif A4A60_03605 SM00644 A4A60_03605 A4A60_03665 SM00028 Tetratricopeptide repeats A4A60_03665 SM00382 ATPases associated with a variety of cellular activities A4A60_03670 SM00829 Enoylreductase A4A60_03715 SM00829 Enoylreductase A4A60_03790 SM00460 Transglutaminase/protease-like homologues A4A60_03840 SM01001 AIR carboxylase A4A60_03850 SM00998 Adenylosuccinate lyase C-terminus A4A60_03865 SM01211 A4A60_03865 A4A60_03890 SM00798 AICARFT/IMPCHase bienzyme A4A60_03890 SM00851 MGS-like domain A4A60_03895 SM01209 A4A60_03895 A4A60_03895 SM01210 A4A60_03895 A4A60_03900 SM00344 helix_turn_helix ASNC type A4A60_03950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_03950 SM00292 breast cancer carboxy-terminal domain A4A60_03950 SM00532 Ligase N family A4A60_03985 SM00845 GatB domain A4A60_04000 SM00046 Diacylglycerol kinase catalytic domain (presumed) A4A60_04010 SM00487 DEAD-like helicases superfamily A4A60_04010 SM00490 helicase superfamily c-terminal domain A4A60_04030 SM00028 Tetratricopeptide repeats A4A60_04070 SM00028 Tetratricopeptide repeats A4A60_04135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_04135 SM00387 Histidine kinase-like ATPases A4A60_04165 SM00342 helix_turn_helix, arabinose operon control protein A4A60_04335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_04340 SM00382 ATPases associated with a variety of cellular activities A4A60_04350 SM00422 helix_turn_helix, mercury resistance A4A60_04375 SM00382 ATPases associated with a variety of cellular activities A4A60_04380 SM00487 DEAD-like helicases superfamily A4A60_04380 SM00490 helicase superfamily c-terminal domain A4A60_04395 SM00829 Enoylreductase A4A60_04400 SM00382 ATPases associated with a variety of cellular activities A4A60_04430 SM00656 A4A60_04430 A4A60_04440 SM00387 Histidine kinase-like ATPases A4A60_04445 SM00448 cheY-homologous receiver domain A4A60_04465 SM00849 Metallo-beta-lactamase superfamily A4A60_04530 SM00642 Alpha-amylase domain A4A60_04535 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_04535 SM00866 A4A60_04535 A4A60_04565 SM00226 Low molecular weight phosphatase family A4A60_04635 SM00478 endonuclease III A4A60_04670 SM00861 Transketolase, pyrimidine binding domain A4A60_04685 SM00382 ATPases associated with a variety of cellular activities A4A60_04740 SM00382 ATPases associated with a variety of cellular activities A4A60_04745 SM00382 ATPases associated with a variety of cellular activities A4A60_04760 SM00387 Histidine kinase-like ATPases A4A60_04765 SM00421 helix_turn_helix, Lux Regulon A4A60_04765 SM00448 cheY-homologous receiver domain A4A60_04770 SM00382 ATPases associated with a variety of cellular activities A4A60_04820 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_04900 SM00287 Bacterial SH3 domain homologues A4A60_04930 SM00478 endonuclease III A4A60_04930 SM00525 A4A60_04930 A4A60_04960 SM00382 ATPases associated with a variety of cellular activities A4A60_05145 SM01060 A4A60_05145 A4A60_05150 SM00382 ATPases associated with a variety of cellular activities A4A60_05155 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_05185 SM00530 Helix-turn-helix XRE-family like proteins A4A60_05200 SM00567 E-Z type HEAT repeats A4A60_05230 SM00763 PrkA AAA domain A4A60_05245 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_05275 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_05280 SM00382 ATPases associated with a variety of cellular activities A4A60_05285 SM00382 ATPases associated with a variety of cellular activities A4A60_05295 SM00357 Cold shock protein domain A4A60_05305 SM00267 diguanylate cyclase A4A60_05360 SM00530 Helix-turn-helix XRE-family like proteins A4A60_05415 SM00028 Tetratricopeptide repeats A4A60_05440 SM00318 Staphylococcal nuclease homologues A4A60_05450 SM00363 S4 RNA-binding domain A4A60_05460 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_05505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4A60_05505 SM00387 Histidine kinase-like ATPases A4A60_05510 SM00421 helix_turn_helix, Lux Regulon A4A60_05510 SM00448 cheY-homologous receiver domain A4A60_05530 SM00257 Lysin motif A4A60_05555 SM00098 Alkaline phosphatase homologues A4A60_05560 SM00257 Lysin motif A4A60_05590 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_05620 SM00563 Phosphate acyltransferases A4A60_05625 SM01091 Transporter associated domain A4A60_05630 SM00422 helix_turn_helix, mercury resistance A4A60_05640 SM01091 Transporter associated domain A4A60_05700 SM00382 ATPases associated with a variety of cellular activities A4A60_05705 SM00382 ATPases associated with a variety of cellular activities A4A60_05755 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_05785 SM00382 ATPases associated with a variety of cellular activities A4A60_05805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_05835 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_05865 SM00382 ATPases associated with a variety of cellular activities A4A60_05955 SM01022 A4A60_05955 A4A60_05970 SM00849 Metallo-beta-lactamase superfamily A4A60_06015 SM00829 Enoylreductase A4A60_06035 SM00855 Phosphoglycerate mutase family A4A60_06055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_06070 SM00914 A4A60_06070 A4A60_06085 SM00894 Excalibur calcium-binding domain A4A60_06120 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_06155 SM00354 helix_turn _helix lactose operon repressor A4A60_06295 SM00342 helix_turn_helix, arabinose operon control protein A4A60_06300 SM00354 helix_turn _helix lactose operon repressor A4A60_06320 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_06355 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_06365 SM00752 Horizontally Transferred TransMembrane Domain A4A60_06450 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4A60_06470 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A4A60_06475 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4A60_06535 SM00825 Beta-ketoacyl synthase A4A60_06545 SM00382 ATPases associated with a variety of cellular activities A4A60_06550 SM00382 ATPases associated with a variety of cellular activities A4A60_06595 SM00382 ATPases associated with a variety of cellular activities A4A60_06600 SM00382 ATPases associated with a variety of cellular activities A4A60_06665 SM01118 A4A60_06665 A4A60_06675 SM00954 Region found in RelA / SpoT proteins A4A60_06865 SM00530 Helix-turn-helix XRE-family like proteins A4A60_06900 SM00530 Helix-turn-helix XRE-family like proteins A4A60_07095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_07095 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4A60_07160 SM00382 ATPases associated with a variety of cellular activities A4A60_07200 SM00829 Enoylreductase A4A60_07220 SM00354 helix_turn _helix lactose operon repressor A4A60_07230 SM00858 A4A60_07230 A4A60_07250 SM00382 ATPases associated with a variety of cellular activities A4A60_07270 SM00028 Tetratricopeptide repeats A4A60_07285 SM00257 Lysin motif A4A60_07285 SM00644 A4A60_07285 A4A60_07310 SM00530 Helix-turn-helix XRE-family like proteins A4A60_07325 SM00382 ATPases associated with a variety of cellular activities A4A60_07430 SM00257 Lysin motif A4A60_07495 SM00257 Lysin motif A4A60_07495 SM00644 A4A60_07495 A4A60_07550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_07575 SM00382 ATPases associated with a variety of cellular activities A4A60_07590 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4A60_07600 SM00382 ATPases associated with a variety of cellular activities A4A60_07660 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4A60_07675 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_07715 SM00382 ATPases associated with a variety of cellular activities A4A60_07730 SM00448 cheY-homologous receiver domain A4A60_07730 SM00862 Transcriptional regulatory protein, C terminal A4A60_07735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_07735 SM00387 Histidine kinase-like ATPases A4A60_07735 SM00388 His Kinase A (phosphoacceptor) domain A4A60_07765 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_07765 SM00924 MgtE intracellular N domain A4A60_07770 SM00422 helix_turn_helix, mercury resistance A4A60_07785 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_07820 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen A4A60_07825 SM00052 Putative diguanylate phosphodiesterase A4A60_07825 SM00267 diguanylate cyclase A4A60_07885 SM00091 PAS domain A4A60_07885 SM00387 Histidine kinase-like ATPases A4A60_07885 SM00388 His Kinase A (phosphoacceptor) domain A4A60_07930 SM01007 Class II Aldolase and Adducin N-terminal domain A4A60_07955 SM00387 Histidine kinase-like ATPases A4A60_07955 SM00388 His Kinase A (phosphoacceptor) domain A4A60_07960 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_07975 SM00382 ATPases associated with a variety of cellular activities A4A60_07975 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_08060 SM00354 helix_turn _helix lactose operon repressor A4A60_08065 SM01061 CAT RNA binding domain A4A60_08100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_08100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_08135 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_08135 SM00091 PAS domain A4A60_08135 SM00387 Histidine kinase-like ATPases A4A60_08135 SM00388 His Kinase A (phosphoacceptor) domain A4A60_08150 SM00260 Two component signalling adaptor domain A4A60_08150 SM00448 cheY-homologous receiver domain A4A60_08165 SM00257 Lysin motif A4A60_08180 SM00052 Putative diguanylate phosphodiesterase A4A60_08290 SM00852 Probable molybdopterin binding domain A4A60_08310 SM00382 ATPases associated with a variety of cellular activities A4A60_08315 SM00382 ATPases associated with a variety of cellular activities A4A60_08330 SM00382 ATPases associated with a variety of cellular activities A4A60_08335 SM01066 Carbohydrate binding domain A4A60_08340 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_08340 SM01134 A4A60_08340 A4A60_08365 SM00382 ATPases associated with a variety of cellular activities A4A60_08395 SM00966 SpoVT / AbrB like domain A4A60_08400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_08400 SM00091 PAS domain A4A60_08400 SM00387 Histidine kinase-like ATPases A4A60_08400 SM00388 His Kinase A (phosphoacceptor) domain A4A60_08420 SM00849 Metallo-beta-lactamase superfamily A4A60_08455 SM00861 Transketolase, pyrimidine binding domain A4A60_08560 SM00838 Elongation factor G C-terminus A4A60_08580 SM00670 Large family of predicted nucleotide-binding domains A4A60_08605 SM00878 Biotin carboxylase C-terminal domain A4A60_08655 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_08705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_08765 SM00740 A4A60_08765 A4A60_08775 SM00740 A4A60_08775 A4A60_08840 SM00842 Cell division protein FtsA A4A60_08845 SM00864 Tubulin/FtsZ family, GTPase domain A4A60_08845 SM00865 Tubulin/FtsZ family, C-terminal domain A4A60_08870 SM00382 ATPases associated with a variety of cellular activities A4A60_08905 SM00363 S4 RNA-binding domain A4A60_08935 SM00363 S4 RNA-binding domain A4A60_08960 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A4A60_08965 SM00851 MGS-like domain A4A60_08965 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4A60_08965 SM01209 A4A60_08965 A4A60_08980 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4A60_09030 SM00831 Cation transporter/ATPase, N-terminus A4A60_09045 SM00072 Guanylate kinase homologues. A4A60_09050 SM01409 A4A60_09050 A4A60_09060 SM00487 DEAD-like helicases superfamily A4A60_09060 SM00490 helicase superfamily c-terminal domain A4A60_09085 SM00331 Sigma factor PP2C-like phosphatases A4A60_09085 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A4A60_09090 SM00220 Serine/Threonine protein kinases, catalytic domain A4A60_09090 SM00740 A4A60_09090 A4A60_09105 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain A4A60_09125 SM01120 A4A60_09125 A4A60_09125 SM01121 A4A60_09125 A4A60_09140 SM00487 DEAD-like helicases superfamily A4A60_09140 SM00490 helicase superfamily c-terminal domain A4A60_09155 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4A60_09160 SM00822 A4A60_09160 A4A60_09170 SM00358 Double-stranded RNA binding motif A4A60_09170 SM00535 Ribonuclease III family A4A60_09175 SM00968 SMC proteins Flexible Hinge Domain A4A60_09180 SM00382 ATPases associated with a variety of cellular activities A4A60_09180 SM00962 SRP54-type protein, GTPase domain A4A60_09180 SM00963 SRP54-type protein, helical bundle domain A4A60_09195 SM00382 ATPases associated with a variety of cellular activities A4A60_09195 SM00962 SRP54-type protein, GTPase domain A4A60_09195 SM00963 SRP54-type protein, helical bundle domain A4A60_09255 SM00881 CoA binding domain A4A60_09265 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4A60_09265 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4A60_09265 SM00493 A4A60_09265 A4A60_09285 SM00382 ATPases associated with a variety of cellular activities A4A60_09285 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_09325 SM00382 ATPases associated with a variety of cellular activities A4A60_09375 SM00448 cheY-homologous receiver domain A4A60_09410 SM00962 SRP54-type protein, GTPase domain A4A60_09420 SM00448 cheY-homologous receiver domain A4A60_09425 SM00073 Histidine Phosphotransfer domain A4A60_09425 SM00260 Two component signalling adaptor domain A4A60_09425 SM00387 Histidine kinase-like ATPases A4A60_09425 SM01231 A4A60_09425 A4A60_09430 SM00260 Two component signalling adaptor domain A4A60_09490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_09500 SM00479 A4A60_09500 A4A60_09500 SM00481 DNA polymerase alpha chain like domain A4A60_09510 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_09510 SM00322 K homology RNA-binding domain A4A60_09545 SM00904 Riboflavin kinase A4A60_09550 SM01387 A4A60_09550 A4A60_09555 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_09555 SM00322 K homology RNA-binding domain A4A60_09590 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4A60_09600 SM01130 A4A60_09600 A4A60_09605 SM00849 Metallo-beta-lactamase superfamily A4A60_09620 SM00382 ATPases associated with a variety of cellular activities A4A60_09620 SM00843 A4A60_09620 A4A60_09625 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_09625 SM00866 A4A60_09625 A4A60_09660 SM00530 Helix-turn-helix XRE-family like proteins A4A60_09670 SM00852 Probable molybdopterin binding domain A4A60_09675 SM00382 ATPases associated with a variety of cellular activities A4A60_09685 SM00322 K homology RNA-binding domain A4A60_09685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_09700 SM00829 Enoylreductase A4A60_09715 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_09730 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A4A60_09730 SM00534 ATPase domain of DNA mismatch repair MUTS family A4A60_09735 SM00853 MutL C terminal dimerisation domain A4A60_09735 SM01340 A4A60_09735 A4A60_09800 SM00507 HNH nucleases A4A60_09850 SM00849 Metallo-beta-lactamase superfamily A4A60_09935 SM00646 A4A60_09935 A4A60_09940 SM00382 ATPases associated with a variety of cellular activities A4A60_09960 SM00422 helix_turn_helix, mercury resistance A4A60_09965 SM01230 A4A60_09965 A4A60_10010 SM00860 SMI1 / KNR4 family A4A60_10105 SM00318 Staphylococcal nuclease homologues A4A60_10115 SM01005 Alanine racemase, C-terminal domain A4A60_10255 SM00257 Lysin motif A4A60_10260 SM00857 Resolvase, N terminal domain A4A60_10270 SM00861 Transketolase, pyrimidine binding domain A4A60_10295 SM00448 cheY-homologous receiver domain A4A60_10375 SM01207 A4A60_10375 A4A60_10380 SM00881 CoA binding domain A4A60_10385 SM00387 Histidine kinase-like ATPases A4A60_10385 SM00433 TopoisomeraseII A4A60_10390 SM00434 DNA Topoisomerase IV A4A60_10410 SM01067 Cellulose binding domain A4A60_10470 SM00878 Biotin carboxylase C-terminal domain A4A60_10505 SM00823 Phosphopantetheine attachment site A4A60_10555 SM00829 Enoylreductase A4A60_10595 SM00822 A4A60_10595 A4A60_10625 SM00382 ATPases associated with a variety of cellular activities A4A60_10630 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_10650 SM00155 Phospholipase D. Active site motifs. A4A60_10755 SM00835 Cupin A4A60_10785 SM00530 Helix-turn-helix XRE-family like proteins A4A60_10850 SM00530 Helix-turn-helix XRE-family like proteins A4A60_10890 SM00382 ATPases associated with a variety of cellular activities A4A60_10980 SM00028 Tetratricopeptide repeats A4A60_11045 SM00860 SMI1 / KNR4 family A4A60_11050 SM00860 SMI1 / KNR4 family A4A60_11055 SM00860 SMI1 / KNR4 family A4A60_11065 SM00860 SMI1 / KNR4 family A4A60_11080 SM00342 helix_turn_helix, arabinose operon control protein A4A60_11095 SM00849 Metallo-beta-lactamase superfamily A4A60_11100 SM00871 Bacterial transcription activator, effector binding domain A4A60_11115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_11165 SM00421 helix_turn_helix, Lux Regulon A4A60_11165 SM00448 cheY-homologous receiver domain A4A60_11170 SM00257 Lysin motif A4A60_11175 SM00341 Helicase and RNase D C-terminal A4A60_11175 SM00487 DEAD-like helicases superfamily A4A60_11175 SM00490 helicase superfamily c-terminal domain A4A60_11175 SM00956 A4A60_11175 A4A60_11270 SM00861 Transketolase, pyrimidine binding domain A4A60_11275 SM00327 von Willebrand factor (vWF) type A domain A4A60_11280 SM00382 ATPases associated with a variety of cellular activities A4A60_11290 SM00257 Lysin motif A4A60_11385 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_11385 SM00245 tail specific protease A4A60_11420 SM00014 Acid phosphatase homologues A4A60_11475 SM00882 Coenzyme A transferase A4A60_11540 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_11585 SM00382 ATPases associated with a variety of cellular activities A4A60_11630 SM00567 E-Z type HEAT repeats A4A60_11630 SM00932 Scaffold protein Nfu/NifU N terminal A4A60_11635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_11655 SM00357 Cold shock protein domain A4A60_11695 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4A60_11695 SM00475 5'-3' exonuclease A4A60_11760 SM00354 helix_turn _helix lactose operon repressor A4A60_11775 SM00491 A4A60_11775 A4A60_11785 SM00981 A4A60_11785 A4A60_11815 SM00487 DEAD-like helicases superfamily A4A60_11815 SM00490 helicase superfamily c-terminal domain A4A60_11875 SM00478 endonuclease III A4A60_11875 SM00525 A4A60_11875 A4A60_11905 SM00479 A4A60_11905 A4A60_11905 SM00487 DEAD-like helicases superfamily A4A60_11905 SM00491 A4A60_11905 A4A60_11945 SM00851 MGS-like domain A4A60_11995 SM00914 A4A60_11995 A4A60_12000 SM00028 Tetratricopeptide repeats A4A60_12065 SM00138 Methyltransferase, chemotaxis proteins A4A60_12075 SM00562 A4A60_12075 A4A60_12115 SM00411 bacterial (prokaryotic) histone like domain A4A60_12175 SM01240 A4A60_12175 A4A60_12180 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_12220 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4A60_12240 SM00257 Lysin motif A4A60_12250 SM00487 DEAD-like helicases superfamily A4A60_12250 SM00490 helicase superfamily c-terminal domain A4A60_12290 SM00091 PAS domain A4A60_12290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_12290 SM00387 Histidine kinase-like ATPases A4A60_12290 SM00388 His Kinase A (phosphoacceptor) domain A4A60_12295 SM00448 cheY-homologous receiver domain A4A60_12295 SM00862 Transcriptional regulatory protein, C terminal A4A60_12315 SM00363 S4 RNA-binding domain A4A60_12330 SM00936 Penicillin-binding protein 5, C-terminal domain A4A60_12415 SM00477 DNA/RNA non-specific endonuclease A4A60_12415 SM00892 DNA/RNA non-specific endonuclease A4A60_12425 SM00645 Papain family cysteine protease A4A60_12545 SM00387 Histidine kinase-like ATPases A4A60_12555 SM00936 Penicillin-binding protein 5, C-terminal domain A4A60_12595 SM00919 Malic enzyme, NAD binding domain A4A60_12595 SM01274 A4A60_12595 A4A60_12610 SM00870 A4A60_12610 A4A60_12615 SM00530 Helix-turn-helix XRE-family like proteins A4A60_12720 SM00849 Metallo-beta-lactamase superfamily A4A60_12755 SM00849 Metallo-beta-lactamase superfamily A4A60_12765 SM01350 A4A60_12765 A4A60_12820 SM00382 ATPases associated with a variety of cellular activities A4A60_12830 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_12830 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4A60_12840 SM00046 Diacylglycerol kinase catalytic domain (presumed) A4A60_12850 SM00422 helix_turn_helix, mercury resistance A4A60_12860 SM00861 Transketolase, pyrimidine binding domain A4A60_12880 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4A60_12890 SM00091 PAS domain A4A60_12890 SM00382 ATPases associated with a variety of cellular activities A4A60_12935 SM00646 A4A60_12935 A4A60_12960 SM00448 cheY-homologous receiver domain A4A60_12970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_12985 SM00363 S4 RNA-binding domain A4A60_12990 SM00861 Transketolase, pyrimidine binding domain A4A60_13025 SM00878 Biotin carboxylase C-terminal domain A4A60_13070 SM00382 ATPases associated with a variety of cellular activities A4A60_13080 SM00841 Elongation factor P, C-terminal A4A60_13080 SM01185 A4A60_13080 A4A60_13115 SM00529 Helix-turn-helix diphteria tox regulatory element A4A60_13125 SM00450 Rhodanese Homology Domain A4A60_13145 SM00487 DEAD-like helicases superfamily A4A60_13145 SM00490 helicase superfamily c-terminal domain A4A60_13160 SM00530 Helix-turn-helix XRE-family like proteins A4A60_13220 SM00382 ATPases associated with a variety of cellular activities A4A60_13240 SM01091 Transporter associated domain A4A60_13270 SM00849 Metallo-beta-lactamase superfamily A4A60_13290 SM00631 A4A60_13290 A4A60_13310 SM00028 Tetratricopeptide repeats A4A60_13350 SM00382 ATPases associated with a variety of cellular activities A4A60_13355 SM00382 ATPases associated with a variety of cellular activities A4A60_13400 SM00257 Lysin motif A4A60_13435 SM00518 AP endonuclease family 2 A4A60_13440 SM00487 DEAD-like helicases superfamily A4A60_13440 SM00490 helicase superfamily c-terminal domain A4A60_13475 SM00400 zinc finger A4A60_13475 SM00493 A4A60_13475 A4A60_13490 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_13535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_13590 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_13605 SM00271 DnaJ molecular chaperone homology domain A4A60_13625 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_13630 SM00838 Elongation factor G C-terminus A4A60_13665 SM00849 Metallo-beta-lactamase superfamily A4A60_13675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_13695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_13705 SM01103 A4A60_13705 A4A60_13740 SM00644 A4A60_13740 A4A60_13750 SM01350 A4A60_13750 A4A60_13795 SM00028 Tetratricopeptide repeats A4A60_13815 SM00860 SMI1 / KNR4 family A4A60_13820 SM00860 SMI1 / KNR4 family A4A60_13855 SM00382 ATPases associated with a variety of cellular activities A4A60_13900 SM00422 helix_turn_helix, mercury resistance A4A60_13920 SM01091 Transporter associated domain A4A60_13975 SM00344 helix_turn_helix ASNC type A4A60_14060 SM00287 Bacterial SH3 domain homologues A4A60_14100 SM00422 helix_turn_helix, mercury resistance A4A60_14110 SM00829 Enoylreductase A4A60_14120 SM00640 Glycosyl hydrolases family 32 A4A60_14145 SM00382 ATPases associated with a variety of cellular activities A4A60_14215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_14215 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4A60_14245 SM00650 Ribosomal RNA adenine dimethylases A4A60_14300 SM00732 Likely ribonuclease with RNase H fold. A4A60_14310 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4A60_14320 SM00382 ATPases associated with a variety of cellular activities A4A60_14325 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_14325 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4A60_14360 SM00382 ATPases associated with a variety of cellular activities A4A60_14365 SM00028 Tetratricopeptide repeats A4A60_14385 SM00382 ATPases associated with a variety of cellular activities A4A60_14415 SM00287 Bacterial SH3 domain homologues A4A60_14415 SM00646 A4A60_14415 A4A60_14425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_14425 SM00954 Region found in RelA / SpoT proteins A4A60_14475 SM01323 A4A60_14475 A4A60_14495 SM00382 ATPases associated with a variety of cellular activities A4A60_14500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_14555 SM00257 Lysin motif A4A60_14600 SM01317 A4A60_14600 A4A60_14700 SM00257 Lysin motif A4A60_14710 SM01004 Delta-aminolevulinic acid dehydratase A4A60_14745 SM00382 ATPases associated with a variety of cellular activities A4A60_14745 SM00464 Found in ATP-dependent protease La (LON) A4A60_14750 SM00382 ATPases associated with a variety of cellular activities A4A60_14755 SM00382 ATPases associated with a variety of cellular activities A4A60_14755 SM00994 ClpX C4-type zinc finger A4A60_14755 SM01086 C-terminal, D2-small domain, of ClpB protein A4A60_14780 SM01329 A4A60_14780 A4A60_14785 SM00917 LeuA allosteric (dimerisation) domain A4A60_14855 SM00487 DEAD-like helicases superfamily A4A60_14855 SM00490 helicase superfamily c-terminal domain A4A60_14895 SM00909 Sporulation and spore germination A4A60_14905 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_14910 SM00421 helix_turn_helix, Lux Regulon A4A60_14950 SM00465 GIY-YIG type nucleases (URI domain) A4A60_14960 SM00813 Alpha-L-arabinofuranosidase C-terminus A4A60_14965 SM00893 Electron transfer flavoprotein domain A4A60_14970 SM00893 Electron transfer flavoprotein domain A4A60_14995 SM00463 Small MutS-related domain A4A60_14995 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A4A60_14995 SM00534 ATPase domain of DNA mismatch repair MUTS family A4A60_15000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4A60_15000 SM00481 DNA polymerase alpha chain like domain A4A60_15000 SM00483 DNA polymerase X family A4A60_15020 SM00873 B3/4 domain A4A60_15020 SM00874 tRNA synthetase B5 domain A4A60_15020 SM00896 Ferredoxin-fold anticodon binding domain A4A60_15035 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4A60_15070 SM00813 Alpha-L-arabinofuranosidase C-terminus A4A60_15100 SM01007 Class II Aldolase and Adducin N-terminal domain A4A60_15165 SM00448 cheY-homologous receiver domain A4A60_15165 SM00850 LytTr DNA-binding domain A4A60_15170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4A60_15170 SM00387 Histidine kinase-like ATPases A4A60_15180 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4A60_15195 SM00382 ATPases associated with a variety of cellular activities A4A60_15215 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4A60_15250 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A4A60_15250 SM01232 A4A60_15250 A4A60_15255 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4A60_15255 SM00474 3'-5' exonuclease A4A60_15255 SM00475 5'-3' exonuclease A4A60_15255 SM00482 DNA polymerase A domain A4A60_15260 SM00091 PAS domain A4A60_15260 SM00387 Histidine kinase-like ATPases A4A60_15260 SM00388 His Kinase A (phosphoacceptor) domain A4A60_15265 SM00448 cheY-homologous receiver domain A4A60_15265 SM00862 Transcriptional regulatory protein, C terminal A4A60_15275 SM01329 A4A60_15275 A4A60_15325 SM00919 Malic enzyme, NAD binding domain A4A60_15325 SM01274 A4A60_15325 A4A60_15330 SM00481 DNA polymerase alpha chain like domain A4A60_15360 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_15365 SM00849 Metallo-beta-lactamase superfamily A4A60_15390 SM00852 Probable molybdopterin binding domain A4A60_15460 SM00981 A4A60_15460 A4A60_15490 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A4A60_15495 SM00267 diguanylate cyclase A4A60_15500 SM00363 S4 RNA-binding domain A4A60_15500 SM01390 A4A60_15500 A4A60_15510 SM00363 S4 RNA-binding domain A4A60_15525 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_15545 SM00354 helix_turn _helix lactose operon repressor A4A60_15550 SM00830 Chorismate mutase type II A4A60_15575 SM00382 ATPases associated with a variety of cellular activities A4A60_15575 SM00843 A4A60_15575 A4A60_15610 SM00919 Malic enzyme, NAD binding domain A4A60_15610 SM01274 A4A60_15610 A4A60_15615 SM00849 Metallo-beta-lactamase superfamily A4A60_15635 SM00642 Alpha-amylase domain A4A60_15640 SM00046 Diacylglycerol kinase catalytic domain (presumed) A4A60_15675 SM00382 ATPases associated with a variety of cellular activities A4A60_15680 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_15685 SM00363 S4 RNA-binding domain A4A60_15760 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_15760 SM00876 Biotin and Thiamin Synthesis associated domain A4A60_15790 SM00354 helix_turn _helix lactose operon repressor A4A60_15815 SM00450 Rhodanese Homology Domain A4A60_15830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_15830 SM00091 PAS domain A4A60_15855 SM00382 ATPases associated with a variety of cellular activities A4A60_15860 SM00387 Histidine kinase-like ATPases A4A60_15865 SM00448 cheY-homologous receiver domain A4A60_15865 SM00862 Transcriptional regulatory protein, C terminal A4A60_15875 SM00382 ATPases associated with a variety of cellular activities A4A60_15890 SM00382 ATPases associated with a variety of cellular activities A4A60_15895 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_15910 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_15970 SM00382 ATPases associated with a variety of cellular activities A4A60_16010 SM01234 A4A60_16010 A4A60_16015 SM00947 Carbonic anhydrase A4A60_16050 SM00382 ATPases associated with a variety of cellular activities A4A60_16060 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A4A60_16100 SM00984 UDP binding domain A4A60_16160 SM00642 Alpha-amylase domain A4A60_16300 SM00244 prohibitin homologues A4A60_16360 SM00047 Lysozyme subfamily 2 A4A60_16410 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_16410 SM01134 A4A60_16410 A4A60_16415 SM01007 Class II Aldolase and Adducin N-terminal domain A4A60_16430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_16430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_16430 SM00319 Homologues of the ligand binding domain of Tar A4A60_16435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_16435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_16435 SM00319 Homologues of the ligand binding domain of Tar A4A60_16440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_16440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_16440 SM00319 Homologues of the ligand binding domain of Tar A4A60_16460 SM00642 Alpha-amylase domain A4A60_16465 SM01091 Transporter associated domain A4A60_16520 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_16530 SM00344 helix_turn_helix ASNC type A4A60_16550 SM00387 Histidine kinase-like ATPases A4A60_16550 SM00388 His Kinase A (phosphoacceptor) domain A4A60_16555 SM01298 A4A60_16555 A4A60_16560 SM00479 A4A60_16560 A4A60_16590 SM00091 PAS domain A4A60_16590 SM00387 Histidine kinase-like ATPases A4A60_16595 SM00448 cheY-homologous receiver domain A4A60_16605 SM00382 ATPases associated with a variety of cellular activities A4A60_16670 SM00421 helix_turn_helix, Lux Regulon A4A60_16670 SM00448 cheY-homologous receiver domain A4A60_16675 SM00387 Histidine kinase-like ATPases A4A60_16700 SM00052 Putative diguanylate phosphodiesterase A4A60_16745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_16790 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A4A60_16790 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A4A60_16800 SM00923 MbtH-like protein A4A60_16805 SM00823 Phosphopantetheine attachment site A4A60_16805 SM00824 Thioesterase A4A60_16890 SM01240 A4A60_16890 A4A60_16995 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_17080 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A4A60_17120 SM00382 ATPases associated with a variety of cellular activities A4A60_17125 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_17125 SM00866 A4A60_17125 A4A60_17155 SM00465 GIY-YIG type nucleases (URI domain) A4A60_17190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_17205 SM00860 SMI1 / KNR4 family A4A60_17210 SM00257 Lysin motif A4A60_17210 SM00644 A4A60_17210 A4A60_17420 SM00530 Helix-turn-helix XRE-family like proteins A4A60_17465 SM00382 ATPases associated with a variety of cellular activities A4A60_17490 SM00382 ATPases associated with a variety of cellular activities A4A60_17490 SM00930 A4A60_17490 A4A60_17505 SM00493 A4A60_17505 A4A60_17560 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_17590 SM00382 ATPases associated with a variety of cellular activities A4A60_17610 SM00382 ATPases associated with a variety of cellular activities A4A60_17670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_17675 SM00448 cheY-homologous receiver domain A4A60_17675 SM00862 Transcriptional regulatory protein, C terminal A4A60_17680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_17680 SM00387 Histidine kinase-like ATPases A4A60_17680 SM00388 His Kinase A (phosphoacceptor) domain A4A60_17720 SM00421 helix_turn_helix, Lux Regulon A4A60_17720 SM00448 cheY-homologous receiver domain A4A60_17725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_17725 SM00387 Histidine kinase-like ATPases A4A60_17760 SM00382 ATPases associated with a variety of cellular activities A4A60_17785 SM00387 Histidine kinase-like ATPases A4A60_17785 SM00388 His Kinase A (phosphoacceptor) domain A4A60_17790 SM00448 cheY-homologous receiver domain A4A60_17790 SM00862 Transcriptional regulatory protein, C terminal A4A60_17810 SM00835 Cupin A4A60_17825 SM00382 ATPases associated with a variety of cellular activities A4A60_17835 SM00382 ATPases associated with a variety of cellular activities A4A60_18025 SM00257 Lysin motif A4A60_18025 SM00644 A4A60_18025 A4A60_18050 SM00047 Lysozyme subfamily 2 A4A60_18240 SM00530 Helix-turn-helix XRE-family like proteins A4A60_18245 SM00530 Helix-turn-helix XRE-family like proteins A4A60_18250 SM00530 Helix-turn-helix XRE-family like proteins A4A60_18275 SM00316 Ribosomal protein S1-like RNA-binding domain A4A60_18275 SM00357 Cold shock protein domain A4A60_18275 SM00955 A4A60_18275 A4A60_18295 SM00530 Helix-turn-helix XRE-family like proteins A4A60_18300 SM00530 Helix-turn-helix XRE-family like proteins A4A60_18305 SM00530 Helix-turn-helix XRE-family like proteins A4A60_18315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A4A60_18315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_18335 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_18335 SM00382 ATPases associated with a variety of cellular activities A4A60_18360 SM00116 Domain in cystathionine beta-synthase and other proteins. A4A60_18360 SM00382 ATPases associated with a variety of cellular activities A4A60_18395 SM01192 A4A60_18395 A4A60_18395 SM01193 A4A60_18395 A4A60_18420 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4A60_18435 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_18490 SM00421 helix_turn_helix, Lux Regulon A4A60_18490 SM00448 cheY-homologous receiver domain A4A60_18505 SM00382 ATPases associated with a variety of cellular activities A4A60_18515 SM00331 Sigma factor PP2C-like phosphatases A4A60_18545 SM00354 helix_turn _helix lactose operon repressor A4A60_18550 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_18550 SM00895 A4A60_18550 A4A60_18645 SM00530 Helix-turn-helix XRE-family like proteins A4A60_18685 SM00640 Glycosyl hydrolases family 32 A4A60_18730 SM00642 Alpha-amylase domain A4A60_18760 SM00642 Alpha-amylase domain A4A60_18765 SM00354 helix_turn _helix lactose operon repressor A4A60_18785 SM00947 Carbonic anhydrase A4A60_18800 SM00382 ATPases associated with a variety of cellular activities A4A60_18805 SM00387 Histidine kinase-like ATPases A4A60_18810 SM00448 cheY-homologous receiver domain A4A60_18810 SM00862 Transcriptional regulatory protein, C terminal A4A60_18860 SM00028 Tetratricopeptide repeats A4A60_18865 SM00382 ATPases associated with a variety of cellular activities A4A60_18980 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_18980 SM00866 A4A60_18980 A4A60_19030 SM00382 ATPases associated with a variety of cellular activities A4A60_19035 SM00487 DEAD-like helicases superfamily A4A60_19035 SM00490 helicase superfamily c-terminal domain A4A60_19060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_19070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_19070 SM00245 tail specific protease A4A60_19080 SM00382 ATPases associated with a variety of cellular activities A4A60_19095 SM00937 A4A60_19095 A4A60_19100 SM00957 SecA DEAD-like domain A4A60_19100 SM00958 SecA preprotein cross-linking domain A4A60_19200 SM00487 DEAD-like helicases superfamily A4A60_19200 SM00490 helicase superfamily c-terminal domain A4A60_19210 SM00421 helix_turn_helix, Lux Regulon A4A60_19210 SM00448 cheY-homologous receiver domain A4A60_19215 SM00387 Histidine kinase-like ATPases A4A60_19260 SM00382 ATPases associated with a variety of cellular activities A4A60_19295 SM00984 UDP binding domain A4A60_19335 SM00382 ATPases associated with a variety of cellular activities A4A60_19380 SM00047 Lysozyme subfamily 2 A4A60_19380 SM00287 Bacterial SH3 domain homologues A4A60_19440 SM00854 Bacterial capsule synthesis protein PGA_cap A4A60_19460 SM00354 helix_turn _helix lactose operon repressor A4A60_19475 SM00382 ATPases associated with a variety of cellular activities A4A60_19490 SM00287 Bacterial SH3 domain homologues A4A60_19545 SM00903 Flavin reductase like domain A4A60_19560 SM00344 helix_turn_helix ASNC type A4A60_19635 SM00984 UDP binding domain A4A60_19665 SM00487 DEAD-like helicases superfamily A4A60_19665 SM00490 helicase superfamily c-terminal domain A4A60_19675 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_19675 SM01134 A4A60_19675 A4A60_19700 SM00387 Histidine kinase-like ATPases A4A60_19715 SM00028 Tetratricopeptide repeats A4A60_19740 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_19750 SM00710 Parallel beta-helix repeats A4A60_19750 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A4A60_19780 SM00938 Nitrogen regulatory protein P-II A4A60_19785 SM00014 Acid phosphatase homologues A4A60_19820 SM00155 Phospholipase D. Active site motifs. A4A60_19825 SM00422 helix_turn_helix, mercury resistance A4A60_19875 SM00028 Tetratricopeptide repeats A4A60_19880 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_19895 SM00327 von Willebrand factor (vWF) type A domain A4A60_19905 SM00327 von Willebrand factor (vWF) type A domain A4A60_19940 SM00382 ATPases associated with a variety of cellular activities A4A60_20005 SM00226 Low molecular weight phosphatase family A4A60_20045 SM00937 A4A60_20045 A4A60_20065 SM00919 Malic enzyme, NAD binding domain A4A60_20065 SM01274 A4A60_20065 A4A60_20080 SM00357 Cold shock protein domain A4A60_20080 SM00382 ATPases associated with a variety of cellular activities A4A60_20080 SM00959 Rho termination factor, N-terminal domain A4A60_20110 SM00448 cheY-homologous receiver domain A4A60_20150 SM00155 Phospholipase D. Active site motifs. A4A60_20175 SM00836 DALR anticodon binding domain A4A60_20175 SM01016 Arginyl tRNA synthetase N terminal dom A4A60_20190 SM00729 Elongator protein 3, MiaB family, Radical SAM A4A60_20240 SM00028 Tetratricopeptide repeats A4A60_20290 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_20295 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4A60_20320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4A60_20415 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A4A60_20455 SM00858 A4A60_20455 A4A60_20510 SM00986 Uracil DNA glycosylase superfamily A4A60_20510 SM00987 UreE urease accessory protein, C-terminal domain A4A60_20530 SM00640 Glycosyl hydrolases family 32 A4A60_20545 SM01061 CAT RNA binding domain A4A60_20700 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4A60_20730 SM01061 CAT RNA binding domain A4A60_20750 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_20755 SM00363 S4 RNA-binding domain A4A60_20765 SM00954 Region found in RelA / SpoT proteins A4A60_20860 SM01060 A4A60_20860 A4A60_20875 SM00382 ATPases associated with a variety of cellular activities A4A60_20910 SM00382 ATPases associated with a variety of cellular activities A4A60_20915 SM00382 ATPases associated with a variety of cellular activities A4A60_20950 SM00382 ATPases associated with a variety of cellular activities A4A60_20990 SM00421 helix_turn_helix, Lux Regulon A4A60_20990 SM00448 cheY-homologous receiver domain A4A60_21030 SM00882 Coenzyme A transferase A4A60_21035 SM00882 Coenzyme A transferase A4A60_21070 SM01060 A4A60_21070 A4A60_21085 SM01061 CAT RNA binding domain A4A60_21100 SM00487 DEAD-like helicases superfamily A4A60_21100 SM00490 helicase superfamily c-terminal domain A4A60_21250 SM00860 SMI1 / KNR4 family A4A60_21270 SM00487 DEAD-like helicases superfamily A4A60_21270 SM00490 helicase superfamily c-terminal domain A4A60_21300 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A4A60_21310 SM01133 A4A60_21310 A4A60_21340 SM00382 ATPases associated with a variety of cellular activities A4A60_21350 SM00062 Bacterial periplasmic substrate-binding proteins A4A60_21415 SM00382 ATPases associated with a variety of cellular activities A4A60_21420 SM00387 Histidine kinase-like ATPases A4A60_21425 SM00448 cheY-homologous receiver domain A4A60_21425 SM00862 Transcriptional regulatory protein, C terminal A4A60_21480 SM00420 helix_turn_helix, Deoxyribose operon repressor A4A60_21480 SM01134 A4A60_21480 A4A60_21515 SM00387 Histidine kinase-like ATPases A4A60_21575 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_21600 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_21600 SM00895 A4A60_21600 A4A60_21615 SM01350 A4A60_21615 A4A60_21640 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4A60_21640 SM00866 A4A60_21640 A4A60_21650 SM00382 ATPases associated with a variety of cellular activities A4A60_21680 SM00382 ATPases associated with a variety of cellular activities A4A60_21740 SM00487 DEAD-like helicases superfamily A4A60_21740 SM00490 helicase superfamily c-terminal domain A4A60_21820 SM00752 Horizontally Transferred TransMembrane Domain A4A60_21835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4A60_21840 SM00091 PAS domain A4A60_21840 SM00382 ATPases associated with a variety of cellular activities A4A60_21850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4A60_21855 SM00849 Metallo-beta-lactamase superfamily A4A60_21870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A4A60_21870 SM00091 PAS domain A4A60_21870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4A60_21870 SM00387 Histidine kinase-like ATPases A4A60_21870 SM00388 His Kinase A (phosphoacceptor) domain A4A60_21875 SM00448 cheY-homologous receiver domain A4A60_21875 SM00862 Transcriptional regulatory protein, C terminal A4A60_21900 SM00788 Adenylosuccinate synthetase A4A60_21910 SM00382 ATPases associated with a variety of cellular activities A4A60_21950 SM00267 diguanylate cyclase A4A60_21975 SM01131 A4A60_21975 A4A60_21995 SM00422 helix_turn_helix, mercury resistance A4A60_22025 SM00347 helix_turn_helix multiple antibiotic resistance protein A4A60_22055 SM00871 Bacterial transcription activator, effector binding domain A4A60_22075 SM01266 A4A60_22075 A4A60_22115 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4A60_22145 SM00470 ParB-like nuclease domain A4A60_22160 SM00470 ParB-like nuclease domain A4A60_22170 SM01228 A4A60_22170 A4A60_22180 SM00322 K homology RNA-binding domain A4A60_22180 SM00393 Putative single-stranded nucleic acids-binding domain A4A60_22180 SM01245 A4A60_22180 A4A60_22200 SM00028 Tetratricopeptide repeats