BSR08_00065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_00065 SM00387 Histidine kinase-like ATPases BSR08_00095 SM00342 helix_turn_helix, arabinose operon control protein BSR08_00200 SM00894 Excalibur calcium-binding domain BSR08_00275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSR08_00280 SM00382 ATPases associated with a variety of cellular activities BSR08_00290 SM00422 helix_turn_helix, mercury resistance BSR08_00315 SM00382 ATPases associated with a variety of cellular activities BSR08_00320 SM00487 DEAD-like helicases superfamily BSR08_00320 SM00490 helicase superfamily c-terminal domain BSR08_00330 SM00656 BSR08_00330 BSR08_00340 SM00387 Histidine kinase-like ATPases BSR08_00345 SM00448 cheY-homologous receiver domain BSR08_00365 SM00849 Metallo-beta-lactamase superfamily BSR08_00440 SM00642 Alpha-amylase domain BSR08_00445 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_00445 SM00866 BSR08_00445 BSR08_00485 SM00226 Low molecular weight phosphatase family BSR08_00555 SM00478 endonuclease III BSR08_00590 SM00861 Transketolase, pyrimidine binding domain BSR08_00605 SM00382 ATPases associated with a variety of cellular activities BSR08_00665 SM00382 ATPases associated with a variety of cellular activities BSR08_00670 SM00382 ATPases associated with a variety of cellular activities BSR08_00685 SM00342 helix_turn_helix, arabinose operon control protein BSR08_00705 SM00387 Histidine kinase-like ATPases BSR08_00710 SM00421 helix_turn_helix, Lux Regulon BSR08_00710 SM00448 cheY-homologous receiver domain BSR08_00715 SM00382 ATPases associated with a variety of cellular activities BSR08_00765 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_00845 SM00287 Bacterial SH3 domain homologues BSR08_00875 SM00478 endonuclease III BSR08_00875 SM00525 BSR08_00875 BSR08_00905 SM00382 ATPases associated with a variety of cellular activities BSR08_01075 SM01060 BSR08_01075 BSR08_01080 SM00382 ATPases associated with a variety of cellular activities BSR08_01085 SM00062 Bacterial periplasmic substrate-binding proteins BSR08_01115 SM00530 Helix-turn-helix XRE-family like proteins BSR08_01130 SM00567 E-Z type HEAT repeats BSR08_01160 SM00763 PrkA AAA domain BSR08_01175 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_01205 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_01210 SM00382 ATPases associated with a variety of cellular activities BSR08_01215 SM00382 ATPases associated with a variety of cellular activities BSR08_01225 SM00357 Cold shock protein domain BSR08_01240 SM00267 diguanylate cyclase BSR08_01295 SM00530 Helix-turn-helix XRE-family like proteins BSR08_01350 SM00028 Tetratricopeptide repeats BSR08_01375 SM00318 Staphylococcal nuclease homologues BSR08_01385 SM00363 S4 RNA-binding domain BSR08_01395 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_01440 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSR08_01440 SM00387 Histidine kinase-like ATPases BSR08_01445 SM00421 helix_turn_helix, Lux Regulon BSR08_01445 SM00448 cheY-homologous receiver domain BSR08_01465 SM00257 Lysin motif BSR08_01485 SM00098 Alkaline phosphatase homologues BSR08_01490 SM00257 Lysin motif BSR08_01520 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_01550 SM00563 Phosphate acyltransferases BSR08_01555 SM01091 Transporter associated domain BSR08_01560 SM00422 helix_turn_helix, mercury resistance BSR08_01570 SM01091 Transporter associated domain BSR08_01630 SM00382 ATPases associated with a variety of cellular activities BSR08_01635 SM00382 ATPases associated with a variety of cellular activities BSR08_01690 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_01720 SM00382 ATPases associated with a variety of cellular activities BSR08_01740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_01780 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_01810 SM00382 ATPases associated with a variety of cellular activities BSR08_01895 SM01022 BSR08_01895 BSR08_01910 SM00849 Metallo-beta-lactamase superfamily BSR08_01950 SM00829 Enoylreductase BSR08_01960 SM00855 Phosphoglycerate mutase family BSR08_01980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSR08_01995 SM00914 BSR08_01995 BSR08_02010 SM00894 Excalibur calcium-binding domain BSR08_02045 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_02080 SM00354 helix_turn _helix lactose operon repressor BSR08_02225 SM00342 helix_turn_helix, arabinose operon control protein BSR08_02230 SM00354 helix_turn _helix lactose operon repressor BSR08_02250 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_02285 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_02350 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSR08_02370 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BSR08_02375 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSR08_02435 SM00825 Beta-ketoacyl synthase BSR08_02445 SM00382 ATPases associated with a variety of cellular activities BSR08_02450 SM00382 ATPases associated with a variety of cellular activities BSR08_02495 SM00382 ATPases associated with a variety of cellular activities BSR08_02500 SM00382 ATPases associated with a variety of cellular activities BSR08_02565 SM01118 BSR08_02565 BSR08_02575 SM00954 Region found in RelA / SpoT proteins BSR08_02770 SM00530 Helix-turn-helix XRE-family like proteins BSR08_02785 SM01040 BRO family, N-terminal domain BSR08_02820 SM00530 Helix-turn-helix XRE-family like proteins BSR08_02850 SM00028 Tetratricopeptide repeats BSR08_02860 SM00860 SMI1 / KNR4 family BSR08_02885 SM00530 Helix-turn-helix XRE-family like proteins BSR08_03085 SM00382 ATPases associated with a variety of cellular activities BSR08_03125 SM00829 Enoylreductase BSR08_03145 SM00354 helix_turn _helix lactose operon repressor BSR08_03155 SM00858 BSR08_03155 BSR08_03190 SM00028 Tetratricopeptide repeats BSR08_03205 SM00257 Lysin motif BSR08_03205 SM00644 BSR08_03205 BSR08_03230 SM00530 Helix-turn-helix XRE-family like proteins BSR08_03245 SM00382 ATPases associated with a variety of cellular activities BSR08_03350 SM00257 Lysin motif BSR08_03415 SM00257 Lysin motif BSR08_03415 SM00644 BSR08_03415 BSR08_03465 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_03490 SM00382 ATPases associated with a variety of cellular activities BSR08_03505 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSR08_03515 SM00382 ATPases associated with a variety of cellular activities BSR08_03575 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSR08_03590 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_03630 SM00382 ATPases associated with a variety of cellular activities BSR08_03645 SM00448 cheY-homologous receiver domain BSR08_03645 SM00862 Transcriptional regulatory protein, C terminal BSR08_03650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_03650 SM00387 Histidine kinase-like ATPases BSR08_03650 SM00388 His Kinase A (phosphoacceptor) domain BSR08_03680 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_03680 SM00924 MgtE intracellular N domain BSR08_03685 SM00422 helix_turn_helix, mercury resistance BSR08_03700 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_03735 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BSR08_03740 SM00052 Putative diguanylate phosphodiesterase BSR08_03740 SM00267 diguanylate cyclase BSR08_03805 SM00091 PAS domain BSR08_03805 SM00387 Histidine kinase-like ATPases BSR08_03805 SM00388 His Kinase A (phosphoacceptor) domain BSR08_03850 SM01007 Class II Aldolase and Adducin N-terminal domain BSR08_03875 SM00387 Histidine kinase-like ATPases BSR08_03875 SM00388 His Kinase A (phosphoacceptor) domain BSR08_03880 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_03895 SM00382 ATPases associated with a variety of cellular activities BSR08_03895 SM01086 C-terminal, D2-small domain, of ClpB protein BSR08_03980 SM00354 helix_turn _helix lactose operon repressor BSR08_03985 SM01061 CAT RNA binding domain BSR08_04020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSR08_04020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_04070 SM00260 Two component signalling adaptor domain BSR08_04070 SM00448 cheY-homologous receiver domain BSR08_04085 SM00257 Lysin motif BSR08_04100 SM00052 Putative diguanylate phosphodiesterase BSR08_04210 SM00852 Probable molybdopterin binding domain BSR08_04235 SM00382 ATPases associated with a variety of cellular activities BSR08_04250 SM00382 ATPases associated with a variety of cellular activities BSR08_04255 SM01066 Carbohydrate binding domain BSR08_04260 SM00420 helix_turn_helix, Deoxyribose operon repressor BSR08_04260 SM01134 BSR08_04260 BSR08_04285 SM00382 ATPases associated with a variety of cellular activities BSR08_04310 SM00966 SpoVT / AbrB like domain BSR08_04315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSR08_04315 SM00091 PAS domain BSR08_04315 SM00387 Histidine kinase-like ATPases BSR08_04315 SM00388 His Kinase A (phosphoacceptor) domain BSR08_04335 SM00849 Metallo-beta-lactamase superfamily BSR08_04370 SM00861 Transketolase, pyrimidine binding domain BSR08_04475 SM00838 Elongation factor G C-terminus BSR08_04495 SM00670 Large family of predicted nucleotide-binding domains BSR08_04520 SM00878 Biotin carboxylase C-terminal domain BSR08_04565 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_04615 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_04675 SM00740 BSR08_04675 BSR08_04685 SM00740 BSR08_04685 BSR08_04750 SM00842 Cell division protein FtsA BSR08_04755 SM00864 Tubulin/FtsZ family, GTPase domain BSR08_04755 SM00865 Tubulin/FtsZ family, C-terminal domain BSR08_04780 SM00382 ATPases associated with a variety of cellular activities BSR08_04815 SM00363 S4 RNA-binding domain BSR08_04840 SM00363 S4 RNA-binding domain BSR08_04865 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BSR08_04870 SM00851 MGS-like domain BSR08_04870 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSR08_04885 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSR08_04935 SM00831 Cation transporter/ATPase, N-terminus BSR08_04950 SM00072 Guanylate kinase homologues. BSR08_04955 SM01409 BSR08_04955 BSR08_04965 SM00487 DEAD-like helicases superfamily BSR08_04965 SM00490 helicase superfamily c-terminal domain BSR08_04990 SM00331 Sigma factor PP2C-like phosphatases BSR08_04990 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BSR08_04995 SM00220 Serine/Threonine protein kinases, catalytic domain BSR08_04995 SM00740 BSR08_04995 BSR08_05010 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BSR08_05030 SM01120 BSR08_05030 BSR08_05030 SM01121 BSR08_05030 BSR08_05045 SM00487 DEAD-like helicases superfamily BSR08_05045 SM00490 helicase superfamily c-terminal domain BSR08_05060 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSR08_05065 SM00822 BSR08_05065 BSR08_05075 SM00358 Double-stranded RNA binding motif BSR08_05075 SM00535 Ribonuclease III family BSR08_05080 SM00968 SMC proteins Flexible Hinge Domain BSR08_05085 SM00382 ATPases associated with a variety of cellular activities BSR08_05085 SM00962 SRP54-type protein, GTPase domain BSR08_05085 SM00963 SRP54-type protein, helical bundle domain BSR08_05100 SM00382 ATPases associated with a variety of cellular activities BSR08_05100 SM00962 SRP54-type protein, GTPase domain BSR08_05100 SM00963 SRP54-type protein, helical bundle domain BSR08_05160 SM00881 CoA binding domain BSR08_05170 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BSR08_05170 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BSR08_05170 SM00493 BSR08_05170 BSR08_05190 SM00382 ATPases associated with a variety of cellular activities BSR08_05190 SM01086 C-terminal, D2-small domain, of ClpB protein BSR08_05230 SM00382 ATPases associated with a variety of cellular activities BSR08_05280 SM00448 cheY-homologous receiver domain BSR08_05315 SM00962 SRP54-type protein, GTPase domain BSR08_05325 SM00448 cheY-homologous receiver domain BSR08_05330 SM00073 Histidine Phosphotransfer domain BSR08_05330 SM00260 Two component signalling adaptor domain BSR08_05330 SM00387 Histidine kinase-like ATPases BSR08_05330 SM01231 BSR08_05330 BSR08_05335 SM00260 Two component signalling adaptor domain BSR08_05395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_05405 SM00479 BSR08_05405 BSR08_05405 SM00481 DNA polymerase alpha chain like domain BSR08_05415 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_05415 SM00322 K homology RNA-binding domain BSR08_05450 SM00904 Riboflavin kinase BSR08_05455 SM01387 BSR08_05455 BSR08_05460 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_05460 SM00322 K homology RNA-binding domain BSR08_05490 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSR08_05500 SM01130 BSR08_05500 BSR08_05505 SM00849 Metallo-beta-lactamase superfamily BSR08_05520 SM00382 ATPases associated with a variety of cellular activities BSR08_05520 SM00843 BSR08_05520 BSR08_05525 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_05525 SM00866 BSR08_05525 BSR08_05560 SM00530 Helix-turn-helix XRE-family like proteins BSR08_05570 SM00852 Probable molybdopterin binding domain BSR08_05575 SM00382 ATPases associated with a variety of cellular activities BSR08_05585 SM00322 K homology RNA-binding domain BSR08_05585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_05600 SM00829 Enoylreductase BSR08_05610 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_05625 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BSR08_05625 SM00534 ATPase domain of DNA mismatch repair MUTS family BSR08_05630 SM00853 MutL C terminal dimerisation domain BSR08_05630 SM01340 BSR08_05630 BSR08_05695 SM00507 HNH nucleases BSR08_05745 SM00849 Metallo-beta-lactamase superfamily BSR08_05830 SM00646 BSR08_05830 BSR08_05840 SM00382 ATPases associated with a variety of cellular activities BSR08_05860 SM00422 helix_turn_helix, mercury resistance BSR08_05865 SM01230 BSR08_05865 BSR08_05880 SM00530 Helix-turn-helix XRE-family like proteins BSR08_05885 SM00530 Helix-turn-helix XRE-family like proteins BSR08_05930 SM00885 D5 N terminal like BSR08_05940 SM00891 ERCC4 domain BSR08_06080 SM00257 Lysin motif BSR08_06080 SM00644 BSR08_06080 BSR08_06085 SM00860 SMI1 / KNR4 family BSR08_06130 SM00860 SMI1 / KNR4 family BSR08_06140 SM00382 ATPases associated with a variety of cellular activities BSR08_06240 SM00318 Staphylococcal nuclease homologues BSR08_06250 SM01005 Alanine racemase, C-terminal domain BSR08_06405 SM00257 Lysin motif BSR08_06410 SM00857 Resolvase, N terminal domain BSR08_06420 SM00861 Transketolase, pyrimidine binding domain BSR08_06445 SM00448 cheY-homologous receiver domain BSR08_06515 SM01207 BSR08_06515 BSR08_06520 SM00881 CoA binding domain BSR08_06525 SM00387 Histidine kinase-like ATPases BSR08_06525 SM00433 TopoisomeraseII BSR08_06530 SM00434 DNA Topoisomerase IV BSR08_06550 SM01067 Cellulose binding domain BSR08_06610 SM00878 Biotin carboxylase C-terminal domain BSR08_06645 SM00823 Phosphopantetheine attachment site BSR08_06705 SM00829 Enoylreductase BSR08_06745 SM00822 BSR08_06745 BSR08_06775 SM00382 ATPases associated with a variety of cellular activities BSR08_06780 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_06940 SM00860 SMI1 / KNR4 family BSR08_06945 SM00860 SMI1 / KNR4 family BSR08_06950 SM00860 SMI1 / KNR4 family BSR08_06960 SM00860 SMI1 / KNR4 family BSR08_06975 SM00342 helix_turn_helix, arabinose operon control protein BSR08_06990 SM00849 Metallo-beta-lactamase superfamily BSR08_06995 SM00871 Bacterial transcription activator, effector binding domain BSR08_07010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_07050 SM00421 helix_turn_helix, Lux Regulon BSR08_07050 SM00448 cheY-homologous receiver domain BSR08_07055 SM00257 Lysin motif BSR08_07060 SM00341 Helicase and RNase D C-terminal BSR08_07060 SM00487 DEAD-like helicases superfamily BSR08_07060 SM00490 helicase superfamily c-terminal domain BSR08_07060 SM00956 BSR08_07060 BSR08_07150 SM00861 Transketolase, pyrimidine binding domain BSR08_07155 SM00327 von Willebrand factor (vWF) type A domain BSR08_07160 SM00382 ATPases associated with a variety of cellular activities BSR08_07170 SM00257 Lysin motif BSR08_07275 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_07275 SM00245 tail specific protease BSR08_07310 SM00014 Acid phosphatase homologues BSR08_07360 SM00882 Coenzyme A transferase BSR08_07365 SM00882 Coenzyme A transferase BSR08_07430 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_07475 SM00382 ATPases associated with a variety of cellular activities BSR08_07520 SM00567 E-Z type HEAT repeats BSR08_07520 SM00932 Scaffold protein Nfu/NifU N terminal BSR08_07525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_07545 SM00357 Cold shock protein domain BSR08_07585 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSR08_07585 SM00475 5'-3' exonuclease BSR08_07655 SM00354 helix_turn _helix lactose operon repressor BSR08_07670 SM00491 BSR08_07670 BSR08_07685 SM00981 BSR08_07685 BSR08_07720 SM00487 DEAD-like helicases superfamily BSR08_07720 SM00490 helicase superfamily c-terminal domain BSR08_07780 SM00478 endonuclease III BSR08_07780 SM00525 BSR08_07780 BSR08_07810 SM00479 BSR08_07810 BSR08_07810 SM00487 DEAD-like helicases superfamily BSR08_07810 SM00491 BSR08_07810 BSR08_07850 SM00851 MGS-like domain BSR08_07900 SM00914 BSR08_07900 BSR08_07905 SM00028 Tetratricopeptide repeats BSR08_07970 SM00138 Methyltransferase, chemotaxis proteins BSR08_07980 SM00562 BSR08_07980 BSR08_08010 SM00411 bacterial (prokaryotic) histone like domain BSR08_08060 SM01240 BSR08_08060 BSR08_08065 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_08105 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSR08_08125 SM00257 Lysin motif BSR08_08135 SM00487 DEAD-like helicases superfamily BSR08_08135 SM00490 helicase superfamily c-terminal domain BSR08_08175 SM00091 PAS domain BSR08_08175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_08175 SM00387 Histidine kinase-like ATPases BSR08_08175 SM00388 His Kinase A (phosphoacceptor) domain BSR08_08180 SM00448 cheY-homologous receiver domain BSR08_08180 SM00862 Transcriptional regulatory protein, C terminal BSR08_08200 SM00363 S4 RNA-binding domain BSR08_08215 SM00936 Penicillin-binding protein 5, C-terminal domain BSR08_08310 SM00477 DNA/RNA non-specific endonuclease BSR08_08310 SM00892 DNA/RNA non-specific endonuclease BSR08_08320 SM00645 Papain family cysteine protease BSR08_08440 SM00387 Histidine kinase-like ATPases BSR08_08450 SM00936 Penicillin-binding protein 5, C-terminal domain BSR08_08490 SM00919 Malic enzyme, NAD binding domain BSR08_08490 SM01274 BSR08_08490 BSR08_08505 SM00870 BSR08_08505 BSR08_08510 SM00530 Helix-turn-helix XRE-family like proteins BSR08_08615 SM00849 Metallo-beta-lactamase superfamily BSR08_08655 SM00849 Metallo-beta-lactamase superfamily BSR08_08665 SM01350 BSR08_08665 BSR08_08720 SM00382 ATPases associated with a variety of cellular activities BSR08_08730 SM00062 Bacterial periplasmic substrate-binding proteins BSR08_08730 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSR08_08740 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSR08_08750 SM00422 helix_turn_helix, mercury resistance BSR08_08760 SM00861 Transketolase, pyrimidine binding domain BSR08_08775 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSR08_08785 SM00091 PAS domain BSR08_08785 SM00382 ATPases associated with a variety of cellular activities BSR08_08830 SM00646 BSR08_08830 BSR08_08855 SM00448 cheY-homologous receiver domain BSR08_08865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_08880 SM00363 S4 RNA-binding domain BSR08_08885 SM00861 Transketolase, pyrimidine binding domain BSR08_08920 SM00878 Biotin carboxylase C-terminal domain BSR08_08970 SM00382 ATPases associated with a variety of cellular activities BSR08_08980 SM00841 Elongation factor P, C-terminal BSR08_08980 SM01185 BSR08_08980 BSR08_09015 SM00529 Helix-turn-helix diphteria tox regulatory element BSR08_09025 SM00450 Rhodanese Homology Domain BSR08_09045 SM00487 DEAD-like helicases superfamily BSR08_09045 SM00490 helicase superfamily c-terminal domain BSR08_09060 SM00530 Helix-turn-helix XRE-family like proteins BSR08_09120 SM00382 ATPases associated with a variety of cellular activities BSR08_09140 SM01091 Transporter associated domain BSR08_09165 SM00849 Metallo-beta-lactamase superfamily BSR08_09185 SM00631 BSR08_09185 BSR08_09205 SM00028 Tetratricopeptide repeats BSR08_09245 SM00382 ATPases associated with a variety of cellular activities BSR08_09250 SM00382 ATPases associated with a variety of cellular activities BSR08_09295 SM00257 Lysin motif BSR08_09330 SM00518 AP endonuclease family 2 BSR08_09335 SM00487 DEAD-like helicases superfamily BSR08_09335 SM00490 helicase superfamily c-terminal domain BSR08_09375 SM00400 zinc finger BSR08_09375 SM00493 BSR08_09375 BSR08_09390 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_09435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_09490 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_09505 SM00271 DnaJ molecular chaperone homology domain BSR08_09525 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_09530 SM00838 Elongation factor G C-terminus BSR08_09565 SM00849 Metallo-beta-lactamase superfamily BSR08_09575 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSR08_09595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_09605 SM01103 BSR08_09605 BSR08_09640 SM00644 BSR08_09640 BSR08_09650 SM01350 BSR08_09650 BSR08_09700 SM00028 Tetratricopeptide repeats BSR08_09715 SM00860 SMI1 / KNR4 family BSR08_09720 SM00860 SMI1 / KNR4 family BSR08_09760 SM00382 ATPases associated with a variety of cellular activities BSR08_09820 SM00422 helix_turn_helix, mercury resistance BSR08_09835 SM01091 Transporter associated domain BSR08_09885 SM00344 helix_turn_helix ASNC type BSR08_09995 SM00287 Bacterial SH3 domain homologues BSR08_10035 SM00422 helix_turn_helix, mercury resistance BSR08_10045 SM00829 Enoylreductase BSR08_10055 SM00640 Glycosyl hydrolases family 32 BSR08_10080 SM00382 ATPases associated with a variety of cellular activities BSR08_10150 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSR08_10150 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSR08_10185 SM00650 Ribosomal RNA adenine dimethylases BSR08_10240 SM00732 Likely ribonuclease with RNase H fold. BSR08_10250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSR08_10260 SM00382 ATPases associated with a variety of cellular activities BSR08_10265 SM00062 Bacterial periplasmic substrate-binding proteins BSR08_10265 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSR08_10295 SM00382 ATPases associated with a variety of cellular activities BSR08_10300 SM00028 Tetratricopeptide repeats BSR08_10320 SM00382 ATPases associated with a variety of cellular activities BSR08_10350 SM00287 Bacterial SH3 domain homologues BSR08_10350 SM00646 BSR08_10350 BSR08_10365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_10365 SM00954 Region found in RelA / SpoT proteins BSR08_10415 SM01323 BSR08_10415 BSR08_10435 SM00382 ATPases associated with a variety of cellular activities BSR08_10440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSR08_10495 SM00257 Lysin motif BSR08_10540 SM01317 BSR08_10540 BSR08_10635 SM00257 Lysin motif BSR08_10645 SM01004 Delta-aminolevulinic acid dehydratase BSR08_10680 SM00382 ATPases associated with a variety of cellular activities BSR08_10680 SM00464 Found in ATP-dependent protease La (LON) BSR08_10685 SM00382 ATPases associated with a variety of cellular activities BSR08_10690 SM00382 ATPases associated with a variety of cellular activities BSR08_10690 SM00994 ClpX C4-type zinc finger BSR08_10690 SM01086 C-terminal, D2-small domain, of ClpB protein BSR08_10715 SM01329 BSR08_10715 BSR08_10720 SM00917 LeuA allosteric (dimerisation) domain BSR08_10790 SM00487 DEAD-like helicases superfamily BSR08_10790 SM00490 helicase superfamily c-terminal domain BSR08_10830 SM00909 Sporulation and spore germination BSR08_10840 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_10845 SM00421 helix_turn_helix, Lux Regulon BSR08_10890 SM00465 GIY-YIG type nucleases (URI domain) BSR08_10900 SM00813 Alpha-L-arabinofuranosidase C-terminus BSR08_10905 SM00893 Electron transfer flavoprotein domain BSR08_10910 SM00893 Electron transfer flavoprotein domain BSR08_10935 SM00463 Small MutS-related domain BSR08_10935 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BSR08_10935 SM00534 ATPase domain of DNA mismatch repair MUTS family BSR08_10940 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSR08_10940 SM00481 DNA polymerase alpha chain like domain BSR08_10940 SM00483 DNA polymerase X family BSR08_10960 SM00873 B3/4 domain BSR08_10960 SM00874 tRNA synthetase B5 domain BSR08_10960 SM00896 Ferredoxin-fold anticodon binding domain BSR08_10975 SM00967 RNA 2'-O ribose methyltransferase substrate binding BSR08_11010 SM00813 Alpha-L-arabinofuranosidase C-terminus BSR08_11040 SM01007 Class II Aldolase and Adducin N-terminal domain BSR08_11105 SM00448 cheY-homologous receiver domain BSR08_11105 SM00850 LytTr DNA-binding domain BSR08_11110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSR08_11110 SM00387 Histidine kinase-like ATPases BSR08_11120 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSR08_11135 SM00382 ATPases associated with a variety of cellular activities BSR08_11155 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSR08_11185 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BSR08_11185 SM01232 BSR08_11185 BSR08_11190 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSR08_11190 SM00474 3'-5' exonuclease BSR08_11190 SM00475 5'-3' exonuclease BSR08_11190 SM00482 DNA polymerase A domain BSR08_11195 SM00091 PAS domain BSR08_11195 SM00387 Histidine kinase-like ATPases BSR08_11195 SM00388 His Kinase A (phosphoacceptor) domain BSR08_11200 SM00448 cheY-homologous receiver domain BSR08_11200 SM00862 Transcriptional regulatory protein, C terminal BSR08_11210 SM01329 BSR08_11210 BSR08_11255 SM00919 Malic enzyme, NAD binding domain BSR08_11255 SM01274 BSR08_11255 BSR08_11260 SM00481 DNA polymerase alpha chain like domain BSR08_11290 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_11300 SM00849 Metallo-beta-lactamase superfamily BSR08_11325 SM00852 Probable molybdopterin binding domain BSR08_11390 SM00981 BSR08_11390 BSR08_11420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSR08_11425 SM00267 diguanylate cyclase BSR08_11435 SM00363 S4 RNA-binding domain BSR08_11435 SM01390 BSR08_11435 BSR08_11445 SM00363 S4 RNA-binding domain BSR08_11460 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_11480 SM00354 helix_turn _helix lactose operon repressor BSR08_11485 SM00830 Chorismate mutase type II BSR08_11510 SM00382 ATPases associated with a variety of cellular activities BSR08_11510 SM00843 BSR08_11510 BSR08_11545 SM00919 Malic enzyme, NAD binding domain BSR08_11545 SM01274 BSR08_11545 BSR08_11550 SM00849 Metallo-beta-lactamase superfamily BSR08_11570 SM00642 Alpha-amylase domain BSR08_11575 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSR08_11610 SM00382 ATPases associated with a variety of cellular activities BSR08_11615 SM00420 helix_turn_helix, Deoxyribose operon repressor BSR08_11620 SM00363 S4 RNA-binding domain BSR08_11695 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_11695 SM00876 Biotin and Thiamin Synthesis associated domain BSR08_11725 SM00354 helix_turn _helix lactose operon repressor BSR08_11750 SM00450 Rhodanese Homology Domain BSR08_11765 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSR08_11765 SM00091 PAS domain BSR08_11785 SM00382 ATPases associated with a variety of cellular activities BSR08_11790 SM00387 Histidine kinase-like ATPases BSR08_11795 SM00448 cheY-homologous receiver domain BSR08_11795 SM00862 Transcriptional regulatory protein, C terminal BSR08_11805 SM00382 ATPases associated with a variety of cellular activities BSR08_11820 SM00382 ATPases associated with a variety of cellular activities BSR08_11825 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_11840 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_11900 SM00382 ATPases associated with a variety of cellular activities BSR08_11940 SM01234 BSR08_11940 BSR08_11945 SM00947 Carbonic anhydrase BSR08_11980 SM00382 ATPases associated with a variety of cellular activities BSR08_11990 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSR08_12030 SM00984 UDP binding domain BSR08_12090 SM00642 Alpha-amylase domain BSR08_12230 SM00244 prohibitin homologues BSR08_12285 SM00047 Lysozyme subfamily 2 BSR08_12335 SM00420 helix_turn_helix, Deoxyribose operon repressor BSR08_12335 SM01134 BSR08_12335 BSR08_12340 SM01007 Class II Aldolase and Adducin N-terminal domain BSR08_12355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSR08_12355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_12355 SM00319 Homologues of the ligand binding domain of Tar BSR08_12365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSR08_12365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_12365 SM00319 Homologues of the ligand binding domain of Tar BSR08_12385 SM00642 Alpha-amylase domain BSR08_12390 SM01091 Transporter associated domain BSR08_12445 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_12455 SM00344 helix_turn_helix ASNC type BSR08_12475 SM00387 Histidine kinase-like ATPases BSR08_12475 SM00388 His Kinase A (phosphoacceptor) domain BSR08_12480 SM01298 BSR08_12480 BSR08_12485 SM00479 BSR08_12485 BSR08_12515 SM00091 PAS domain BSR08_12515 SM00387 Histidine kinase-like ATPases BSR08_12520 SM00448 cheY-homologous receiver domain BSR08_12530 SM00382 ATPases associated with a variety of cellular activities BSR08_12595 SM00421 helix_turn_helix, Lux Regulon BSR08_12595 SM00448 cheY-homologous receiver domain BSR08_12600 SM00387 Histidine kinase-like ATPases BSR08_12625 SM00052 Putative diguanylate phosphodiesterase BSR08_12670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_12720 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BSR08_12720 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BSR08_12730 SM00923 MbtH-like protein BSR08_12735 SM00823 Phosphopantetheine attachment site BSR08_12735 SM00824 Thioesterase BSR08_12820 SM01240 BSR08_12820 BSR08_12885 SM00530 Helix-turn-helix XRE-family like proteins BSR08_12910 SM00530 Helix-turn-helix XRE-family like proteins BSR08_13025 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_13105 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSR08_13145 SM00382 ATPases associated with a variety of cellular activities BSR08_13150 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_13150 SM00866 BSR08_13150 BSR08_13180 SM00465 GIY-YIG type nucleases (URI domain) BSR08_13205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_13230 SM00382 ATPases associated with a variety of cellular activities BSR08_13260 SM00382 ATPases associated with a variety of cellular activities BSR08_13260 SM00930 BSR08_13260 BSR08_13275 SM00493 BSR08_13275 BSR08_13330 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_13360 SM00382 ATPases associated with a variety of cellular activities BSR08_13380 SM00382 ATPases associated with a variety of cellular activities BSR08_13435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_13440 SM00448 cheY-homologous receiver domain BSR08_13440 SM00862 Transcriptional regulatory protein, C terminal BSR08_13445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_13445 SM00387 Histidine kinase-like ATPases BSR08_13445 SM00388 His Kinase A (phosphoacceptor) domain BSR08_13485 SM00421 helix_turn_helix, Lux Regulon BSR08_13485 SM00448 cheY-homologous receiver domain BSR08_13490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_13490 SM00387 Histidine kinase-like ATPases BSR08_13525 SM00382 ATPases associated with a variety of cellular activities BSR08_13550 SM00387 Histidine kinase-like ATPases BSR08_13550 SM00388 His Kinase A (phosphoacceptor) domain BSR08_13555 SM00448 cheY-homologous receiver domain BSR08_13555 SM00862 Transcriptional regulatory protein, C terminal BSR08_13575 SM00835 Cupin BSR08_13590 SM00382 ATPases associated with a variety of cellular activities BSR08_13600 SM00382 ATPases associated with a variety of cellular activities BSR08_13790 SM00257 Lysin motif BSR08_13790 SM00644 BSR08_13790 BSR08_13820 SM00047 Lysozyme subfamily 2 BSR08_13915 SM00507 HNH nucleases BSR08_14015 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14020 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14025 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14050 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_14050 SM00357 Cold shock protein domain BSR08_14050 SM00955 BSR08_14050 BSR08_14070 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14075 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14080 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSR08_14090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_14110 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_14110 SM00382 ATPases associated with a variety of cellular activities BSR08_14135 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_14135 SM00382 ATPases associated with a variety of cellular activities BSR08_14170 SM01192 BSR08_14170 BSR08_14170 SM01193 BSR08_14170 BSR08_14195 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSR08_14210 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_14260 SM00421 helix_turn_helix, Lux Regulon BSR08_14260 SM00448 cheY-homologous receiver domain BSR08_14275 SM00382 ATPases associated with a variety of cellular activities BSR08_14290 SM01022 BSR08_14290 BSR08_14300 SM00331 Sigma factor PP2C-like phosphatases BSR08_14330 SM00354 helix_turn _helix lactose operon repressor BSR08_14335 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_14335 SM00895 BSR08_14335 BSR08_14430 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14475 SM00640 Glycosyl hydrolases family 32 BSR08_14535 SM00257 Lysin motif BSR08_14535 SM00644 BSR08_14535 BSR08_14570 SM00047 Lysozyme subfamily 2 BSR08_14695 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14725 SM00530 Helix-turn-helix XRE-family like proteins BSR08_14770 SM00642 Alpha-amylase domain BSR08_14800 SM00642 Alpha-amylase domain BSR08_14805 SM00354 helix_turn _helix lactose operon repressor BSR08_14825 SM00947 Carbonic anhydrase BSR08_14840 SM00382 ATPases associated with a variety of cellular activities BSR08_14845 SM00387 Histidine kinase-like ATPases BSR08_14850 SM00448 cheY-homologous receiver domain BSR08_14850 SM00862 Transcriptional regulatory protein, C terminal BSR08_14900 SM00028 Tetratricopeptide repeats BSR08_14905 SM00382 ATPases associated with a variety of cellular activities BSR08_15020 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_15020 SM00866 BSR08_15020 BSR08_15070 SM00382 ATPases associated with a variety of cellular activities BSR08_15075 SM00487 DEAD-like helicases superfamily BSR08_15075 SM00490 helicase superfamily c-terminal domain BSR08_15100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_15110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_15110 SM00245 tail specific protease BSR08_15120 SM00382 ATPases associated with a variety of cellular activities BSR08_15135 SM00937 BSR08_15135 BSR08_15145 SM00957 SecA DEAD-like domain BSR08_15145 SM00958 SecA preprotein cross-linking domain BSR08_15235 SM00487 DEAD-like helicases superfamily BSR08_15235 SM00490 helicase superfamily c-terminal domain BSR08_15245 SM00421 helix_turn_helix, Lux Regulon BSR08_15245 SM00448 cheY-homologous receiver domain BSR08_15250 SM00387 Histidine kinase-like ATPases BSR08_15295 SM00382 ATPases associated with a variety of cellular activities BSR08_15335 SM00984 UDP binding domain BSR08_15360 SM00646 BSR08_15360 BSR08_15415 SM00382 ATPases associated with a variety of cellular activities BSR08_15460 SM00047 Lysozyme subfamily 2 BSR08_15460 SM00287 Bacterial SH3 domain homologues BSR08_15515 SM00854 Bacterial capsule synthesis protein PGA_cap BSR08_15535 SM00354 helix_turn _helix lactose operon repressor BSR08_15550 SM00382 ATPases associated with a variety of cellular activities BSR08_15565 SM00287 Bacterial SH3 domain homologues BSR08_15620 SM00903 Flavin reductase like domain BSR08_15635 SM00344 helix_turn_helix ASNC type BSR08_15710 SM00984 UDP binding domain BSR08_15740 SM00487 DEAD-like helicases superfamily BSR08_15740 SM00490 helicase superfamily c-terminal domain BSR08_15755 SM00420 helix_turn_helix, Deoxyribose operon repressor BSR08_15755 SM01134 BSR08_15755 BSR08_15780 SM00387 Histidine kinase-like ATPases BSR08_15795 SM00028 Tetratricopeptide repeats BSR08_15825 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_15835 SM00710 Parallel beta-helix repeats BSR08_15835 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BSR08_15865 SM00938 Nitrogen regulatory protein P-II BSR08_15870 SM00014 Acid phosphatase homologues BSR08_15905 SM00155 Phospholipase D. Active site motifs. BSR08_15910 SM00422 helix_turn_helix, mercury resistance BSR08_15965 SM00028 Tetratricopeptide repeats BSR08_15975 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_15990 SM00327 von Willebrand factor (vWF) type A domain BSR08_16000 SM00327 von Willebrand factor (vWF) type A domain BSR08_16035 SM00382 ATPases associated with a variety of cellular activities BSR08_16100 SM00226 Low molecular weight phosphatase family BSR08_16140 SM00937 BSR08_16140 BSR08_16160 SM00919 Malic enzyme, NAD binding domain BSR08_16160 SM01274 BSR08_16160 BSR08_16175 SM00357 Cold shock protein domain BSR08_16175 SM00382 ATPases associated with a variety of cellular activities BSR08_16175 SM00959 Rho termination factor, N-terminal domain BSR08_16205 SM00448 cheY-homologous receiver domain BSR08_16235 SM00155 Phospholipase D. Active site motifs. BSR08_16260 SM00155 Phospholipase D. Active site motifs. BSR08_16285 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSR08_16300 SM00100 Cyclic nucleotide-monophosphate binding domain BSR08_16300 SM00419 helix_turn_helix, cAMP Regulatory protein BSR08_16310 SM00836 DALR anticodon binding domain BSR08_16310 SM01016 Arginyl tRNA synthetase N terminal dom BSR08_16330 SM00729 Elongator protein 3, MiaB family, Radical SAM BSR08_16380 SM00028 Tetratricopeptide repeats BSR08_16430 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_16435 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSR08_16460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_16555 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSR08_16595 SM00858 BSR08_16595 BSR08_16650 SM00986 Uracil DNA glycosylase superfamily BSR08_16650 SM00987 UreE urease accessory protein, C-terminal domain BSR08_16670 SM00640 Glycosyl hydrolases family 32 BSR08_16840 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSR08_16875 SM01061 CAT RNA binding domain BSR08_16890 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_16895 SM00363 S4 RNA-binding domain BSR08_16905 SM00954 Region found in RelA / SpoT proteins BSR08_17005 SM01060 BSR08_17005 BSR08_17020 SM00382 ATPases associated with a variety of cellular activities BSR08_17055 SM00382 ATPases associated with a variety of cellular activities BSR08_17060 SM00382 ATPases associated with a variety of cellular activities BSR08_17095 SM00382 ATPases associated with a variety of cellular activities BSR08_17135 SM00421 helix_turn_helix, Lux Regulon BSR08_17135 SM00448 cheY-homologous receiver domain BSR08_17175 SM00882 Coenzyme A transferase BSR08_17180 SM00882 Coenzyme A transferase BSR08_17215 SM01060 BSR08_17215 BSR08_17230 SM01061 CAT RNA binding domain BSR08_17250 SM00487 DEAD-like helicases superfamily BSR08_17250 SM00490 helicase superfamily c-terminal domain BSR08_17430 SM00487 DEAD-like helicases superfamily BSR08_17430 SM00490 helicase superfamily c-terminal domain BSR08_17460 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BSR08_17470 SM01133 BSR08_17470 BSR08_17500 SM00382 ATPases associated with a variety of cellular activities BSR08_17510 SM00062 Bacterial periplasmic substrate-binding proteins BSR08_17580 SM00387 Histidine kinase-like ATPases BSR08_17585 SM00448 cheY-homologous receiver domain BSR08_17585 SM00862 Transcriptional regulatory protein, C terminal BSR08_17645 SM00420 helix_turn_helix, Deoxyribose operon repressor BSR08_17645 SM01134 BSR08_17645 BSR08_17680 SM00387 Histidine kinase-like ATPases BSR08_17695 SM00530 Helix-turn-helix XRE-family like proteins BSR08_17725 SM00382 ATPases associated with a variety of cellular activities BSR08_17755 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_17780 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_17780 SM00895 BSR08_17780 BSR08_17795 SM01350 BSR08_17795 BSR08_17825 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_17825 SM00866 BSR08_17825 BSR08_17835 SM00382 ATPases associated with a variety of cellular activities BSR08_17870 SM00382 ATPases associated with a variety of cellular activities BSR08_17945 SM00487 DEAD-like helicases superfamily BSR08_17945 SM00490 helicase superfamily c-terminal domain BSR08_18030 SM00752 Horizontally Transferred TransMembrane Domain BSR08_18045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_18050 SM00091 PAS domain BSR08_18050 SM00382 ATPases associated with a variety of cellular activities BSR08_18065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSR08_18070 SM00849 Metallo-beta-lactamase superfamily BSR08_18085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSR08_18085 SM00091 PAS domain BSR08_18085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_18085 SM00387 Histidine kinase-like ATPases BSR08_18085 SM00388 His Kinase A (phosphoacceptor) domain BSR08_18090 SM00448 cheY-homologous receiver domain BSR08_18090 SM00862 Transcriptional regulatory protein, C terminal BSR08_18115 SM00788 Adenylosuccinate synthetase BSR08_18125 SM00382 ATPases associated with a variety of cellular activities BSR08_18165 SM00267 diguanylate cyclase BSR08_18190 SM01131 BSR08_18190 BSR08_18210 SM00422 helix_turn_helix, mercury resistance BSR08_18240 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_18275 SM00871 Bacterial transcription activator, effector binding domain BSR08_18305 SM00382 ATPases associated with a variety of cellular activities BSR08_18345 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSR08_18365 SM00470 ParB-like nuclease domain BSR08_18380 SM00470 ParB-like nuclease domain BSR08_18390 SM01228 BSR08_18390 BSR08_18400 SM00322 K homology RNA-binding domain BSR08_18400 SM00393 Putative single-stranded nucleic acids-binding domain BSR08_18400 SM01245 BSR08_18400 BSR08_18420 SM00382 ATPases associated with a variety of cellular activities BSR08_18420 SM00760 Bacterial dnaA protein helix-turn-helix domain BSR08_18425 SM00480 DNA polymerase III beta subunit BSR08_18445 SM00387 Histidine kinase-like ATPases BSR08_18445 SM00433 TopoisomeraseII BSR08_18450 SM00434 DNA Topoisomerase IV BSR08_18485 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_18485 SM01240 BSR08_18485 BSR08_18490 SM00936 Penicillin-binding protein 5, C-terminal domain BSR08_18525 SM00257 Lysin motif BSR08_18525 SM00636 BSR08_18525 BSR08_18545 SM00382 ATPases associated with a variety of cellular activities BSR08_18555 SM00493 BSR08_18555 BSR08_18650 SM00465 GIY-YIG type nucleases (URI domain) BSR08_18660 SM00966 SpoVT / AbrB like domain BSR08_18675 SM01208 BSR08_18675 BSR08_18680 SM00493 BSR08_18680 BSR08_18685 SM00650 Ribosomal RNA adenine dimethylases BSR08_18735 SM01400 BSR08_18735 BSR08_18755 SM00487 DEAD-like helicases superfamily BSR08_18755 SM00490 helicase superfamily c-terminal domain BSR08_18755 SM00982 BSR08_18755 BSR08_18755 SM01058 CarD-like/TRCF domain BSR08_18760 SM00966 SpoVT / AbrB like domain BSR08_18775 SM00363 S4 RNA-binding domain BSR08_18795 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_18810 SM00331 Sigma factor PP2C-like phosphatases BSR08_18810 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BSR08_18820 SM00220 Serine/Threonine protein kinases, catalytic domain BSR08_18825 SM00977 TilS substrate C-terminal domain BSR08_18835 SM00382 ATPases associated with a variety of cellular activities BSR08_18880 SM00905 Dihydroneopterin aldolase BSR08_18890 SM00530 Helix-turn-helix XRE-family like proteins BSR08_18995 SM00382 ATPases associated with a variety of cellular activities BSR08_18995 SM01086 C-terminal, D2-small domain, of ClpB protein BSR08_19000 SM00382 ATPases associated with a variety of cellular activities BSR08_19010 SM00670 Large family of predicted nucleotide-binding domains BSR08_19040 SM00840 BSR08_19040 BSR08_19045 SM00535 Ribonuclease III family BSR08_19050 SM00967 RNA 2'-O ribose methyltransferase substrate binding BSR08_19075 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BSR08_19075 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSR08_19080 SM00649 Ribosomal protein L11/L12 BSR08_19110 SM00663 RNA polymerase I subunit A N-terminus BSR08_19130 SM00838 Elongation factor G C-terminus BSR08_19130 SM00889 Elongation factor G, domain IV BSR08_19145 SM01403 BSR08_19145 BSR08_19165 SM01382 BSR08_19165 BSR08_19165 SM01383 BSR08_19165 BSR08_19180 SM00322 K homology RNA-binding domain BSR08_19200 SM01374 BSR08_19200 BSR08_19205 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSR08_19270 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_19290 SM00662 RNA polymerases D BSR08_19300 SM00382 ATPases associated with a variety of cellular activities BSR08_19305 SM00382 ATPases associated with a variety of cellular activities BSR08_19345 SM00646 BSR08_19345 BSR08_19360 SM01251 BSR08_19360 BSR08_19480 SM00342 helix_turn_helix, arabinose operon control protein BSR08_19590 SM00342 helix_turn_helix, arabinose operon control protein BSR08_19630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_19630 SM00388 His Kinase A (phosphoacceptor) domain BSR08_19710 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_19740 SM00342 helix_turn_helix, arabinose operon control protein BSR08_19825 SM00342 helix_turn_helix, arabinose operon control protein BSR08_19830 SM00450 Rhodanese Homology Domain BSR08_19850 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_19850 SM00866 BSR08_19850 BSR08_19890 SM00387 Histidine kinase-like ATPases BSR08_19895 SM00448 cheY-homologous receiver domain BSR08_19905 SM01130 BSR08_19905 BSR08_19920 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSR08_19925 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_19925 SM00895 BSR08_19925 BSR08_19930 SM00858 BSR08_19930 BSR08_19950 SM00448 cheY-homologous receiver domain BSR08_19950 SM00862 Transcriptional regulatory protein, C terminal BSR08_19955 SM00387 Histidine kinase-like ATPases BSR08_19955 SM00388 His Kinase A (phosphoacceptor) domain BSR08_19960 SM00382 ATPases associated with a variety of cellular activities BSR08_19985 SM00327 von Willebrand factor (vWF) type A domain BSR08_20030 SM00870 BSR08_20030 BSR08_20055 SM00448 cheY-homologous receiver domain BSR08_20055 SM00850 LytTr DNA-binding domain BSR08_20105 SM00642 Alpha-amylase domain BSR08_20115 SM00382 ATPases associated with a variety of cellular activities BSR08_20180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_20185 SM00116 Domain in cystathionine beta-synthase and other proteins. BSR08_20185 SM00382 ATPases associated with a variety of cellular activities BSR08_20360 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSR08_20400 SM00062 Bacterial periplasmic substrate-binding proteins BSR08_20420 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_20460 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSR08_20475 SM00823 Phosphopantetheine attachment site BSR08_20475 SM01294 BSR08_20475 BSR08_20480 SM00823 Phosphopantetheine attachment site BSR08_20480 SM01294 BSR08_20480 BSR08_20485 SM00823 Phosphopantetheine attachment site BSR08_20510 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_20530 SM00382 ATPases associated with a variety of cellular activities BSR08_20540 SM00062 Bacterial periplasmic substrate-binding proteins BSR08_20580 SM00710 Parallel beta-helix repeats BSR08_20580 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BSR08_20605 SM00382 ATPases associated with a variety of cellular activities BSR08_20615 SM00448 cheY-homologous receiver domain BSR08_20615 SM00862 Transcriptional regulatory protein, C terminal BSR08_20620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_20620 SM00387 Histidine kinase-like ATPases BSR08_20620 SM00388 His Kinase A (phosphoacceptor) domain BSR08_20625 SM00028 Tetratricopeptide repeats BSR08_20660 SM00382 ATPases associated with a variety of cellular activities BSR08_20695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_20700 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_20735 SM00420 helix_turn_helix, Deoxyribose operon repressor BSR08_20760 SM01329 BSR08_20760 BSR08_20805 SM00796 Allophanate hydrolase subunit 1 BSR08_20810 SM00797 Allophanate hydrolase subunit 2 BSR08_20815 SM00346 helix_turn_helix isocitrate lyase regulation BSR08_20890 SM00344 helix_turn_helix ASNC type BSR08_20895 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BSR08_20895 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BSR08_20895 SM00493 BSR08_20895 BSR08_20920 SM00752 Horizontally Transferred TransMembrane Domain BSR08_20980 SM00091 PAS domain BSR08_20980 SM00387 Histidine kinase-like ATPases BSR08_20985 SM00448 cheY-homologous receiver domain BSR08_21005 SM00382 ATPases associated with a variety of cellular activities BSR08_21060 SM00487 DEAD-like helicases superfamily BSR08_21060 SM00490 helicase superfamily c-terminal domain BSR08_21090 SM01005 Alanine racemase, C-terminal domain BSR08_21115 SM00387 Histidine kinase-like ATPases BSR08_21120 SM00331 Sigma factor PP2C-like phosphatases BSR08_21140 SM00331 Sigma factor PP2C-like phosphatases BSR08_21140 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BSR08_21160 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_21165 SM00316 Ribosomal protein S1-like RNA-binding domain BSR08_21165 SM00732 Likely ribonuclease with RNase H fold. BSR08_21175 SM00731 SprT homologues. BSR08_21225 SM00530 Helix-turn-helix XRE-family like proteins BSR08_21330 SM00028 Tetratricopeptide repeats BSR08_21380 SM00530 Helix-turn-helix XRE-family like proteins BSR08_21410 SM00357 Cold shock protein domain BSR08_21415 SM01058 CarD-like/TRCF domain BSR08_21430 SM00342 helix_turn_helix, arabinose operon control protein BSR08_21440 SM00342 helix_turn_helix, arabinose operon control protein BSR08_21440 SM00871 Bacterial transcription activator, effector binding domain BSR08_21445 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_21490 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_21515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_21540 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_21555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_21570 SM00387 Histidine kinase-like ATPases BSR08_21575 SM00421 helix_turn_helix, Lux Regulon BSR08_21575 SM00448 cheY-homologous receiver domain BSR08_21595 SM00422 helix_turn_helix, mercury resistance BSR08_21595 SM00871 Bacterial transcription activator, effector binding domain BSR08_21685 SM00382 ATPases associated with a variety of cellular activities BSR08_21700 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_21715 SM00347 helix_turn_helix multiple antibiotic resistance protein BSR08_21715 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSR08_21730 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_21730 SM00895 BSR08_21730 BSR08_21735 SM00257 Lysin motif BSR08_21735 SM00636 BSR08_21735 BSR08_21750 SM00098 Alkaline phosphatase homologues BSR08_21770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSR08_21805 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSR08_21805 SM00866 BSR08_21805 BSR08_21890 SM00382 ATPases associated with a variety of cellular activities BSR08_21900 SM00881 CoA binding domain BSR08_21930 SM00883 Chaperonin 10 Kd subunit BSR08_21950 SM00028 Tetratricopeptide repeats BSR08_21950 SM00382 ATPases associated with a variety of cellular activities BSR08_21955 SM00829 Enoylreductase BSR08_22000 SM00829 Enoylreductase BSR08_22075 SM00460 Transglutaminase/protease-like homologues BSR08_22115 SM01001 AIR carboxylase BSR08_22125 SM00998 Adenylosuccinate lyase C-terminus BSR08_22140 SM01211 BSR08_22140 BSR08_22165 SM00798 AICARFT/IMPCHase bienzyme BSR08_22165 SM00851 MGS-like domain BSR08_22170 SM01209 BSR08_22170 BSR08_22170 SM01210 BSR08_22170 BSR08_22175 SM00344 helix_turn_helix ASNC type BSR08_22225 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSR08_22225 SM00292 breast cancer carboxy-terminal domain BSR08_22225 SM00532 Ligase N family BSR08_22270 SM00845 GatB domain BSR08_22285 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSR08_22330 SM00028 Tetratricopeptide repeats BSR08_22385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSR08_22385 SM00387 Histidine kinase-like ATPases BSR08_22525 SM00318 Staphylococcal nuclease homologues BSR08_22770 SM00530 Helix-turn-helix XRE-family like proteins