locus-tag	class	description
GII79_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GII79_00010	COG0592	DNA-directed DNA polymerase activity
GII79_00015	COG2501	S4 domain
GII79_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GII79_00030	COG0187	DNA topoisomerase II activity
GII79_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GII79_00070	COG0516	GMP reductase activity
GII79_00070	COG0517	IMP dehydrogenase activity
GII79_00075	COG1686	Belongs to the peptidase S11 family
GII79_00080	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GII79_00085	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GII79_00090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GII79_00100	COG1428	Deoxynucleoside kinase
GII79_00105	COG1428	Deoxynucleoside kinase
GII79_00110	COG3858	chitin binding
GII79_00110	COG1388	LysM domain
GII79_00115	COG1335	isochorismatase
GII79_00120	COG0590	tRNA wobble adenosine to inosine editing
GII79_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GII79_00135	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GII79_00140	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GII79_00185	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
GII79_00190	COG3853	Toxic anion resistance protein (TelA)
GII79_00195	COG1982	Orn Lys Arg decarboxylase major
GII79_00200	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GII79_00205	COG3870	Protein conserved in bacteria
GII79_00210	COG1728	Protein conserved in bacteria
GII79_00215	COG0470	DNA polymerase III
GII79_00220	COG1774	PSP1 C-terminal conserved region
GII79_00225	COG4467	Involved in initiation control of chromosome replication
GII79_00230	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
GII79_00235	COG2827	Endonuclease containing a URI domain
GII79_00240	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GII79_00245	COG2002	toxin-antitoxin pair type II binding
GII79_00250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GII79_00250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GII79_00255	COG0084	hydrolase, TatD family'
GII79_00260	COG3584	3D domain protein
GII79_00260	COG3583	domain protein
GII79_00265	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GII79_00270	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
GII79_00280	COG4466	Protein conserved in bacteria
GII79_00290	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GII79_00295	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GII79_00305	COG2088	sporulation resulting in formation of a cellular spore
GII79_00310	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GII79_00315	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GII79_00320	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GII79_00325	COG0193	aminoacyl-tRNA hydrolase activity
GII79_00335	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GII79_00340	COG2002	toxin-antitoxin pair type II binding
GII79_00345	COG2244	polysaccharide biosynthetic process
GII79_00350	COG3956	TIGRFAM MazG family protein
GII79_00355	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
GII79_00370	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GII79_00375	COG1098	S1 RNA binding domain
GII79_00390	COG2208	phosphoserine phosphatase activity
GII79_00395	COG2304	oxidoreductase activity
GII79_00400	COG0515	serine threonine protein kinase
GII79_00405	COG0037	tRNA processing
GII79_00415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GII79_00420	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GII79_00425	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GII79_00430	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GII79_00435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GII79_00440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GII79_00445	COG0512	Glutamine amidotransferase of anthranilate synthase
GII79_00450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GII79_00455	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GII79_00460	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GII79_00465	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GII79_00470	COG1396	sequence-specific DNA binding
GII79_00475	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GII79_00480	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
GII79_00560	COG4463	regulation of RNA biosynthetic process
GII79_00565	COG3880	PFAM UvrB UvrC protein
GII79_00570	COG3869	Catalyzes the specific phosphorylation of arginine residues in
GII79_00575	COG0542	response to heat
GII79_00580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GII79_00585	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
GII79_00590	COG4956	integral membrane protein (PIN domain superfamily)
GII79_00595	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
GII79_00600	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GII79_00605	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GII79_00610	COG1045	serine acetyltransferase
GII79_00615	COG0215	cysteine-tRNA ligase activity
GII79_00620	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GII79_00625	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GII79_00630	COG3688	RNA-binding protein containing a PIN domain
GII79_00635	COG1595	DNA-templated transcription, initiation
GII79_00640	COG0267	Belongs to the bacterial ribosomal protein bL33 family
GII79_00645	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GII79_00650	COG0250	Participates in transcription elongation, termination and antitermination
GII79_00655	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GII79_00660	COG0081	regulation of translation
GII79_00665	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GII79_00670	COG0222	ribosome binding
GII79_00675	COG2813	Specifically methylates the guanine in position
GII79_00680	COG0085	RNA polymerase activity
GII79_00685	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GII79_00690	COG1358	cellular component organization or biogenesis
GII79_00695	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GII79_00700	COG0049	tRNA binding
GII79_00705	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GII79_00710	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GII79_00715	COG0596	Alpha beta hydrolase
GII79_00720	COG0051	transcription antitermination factor activity, RNA binding
GII79_00725	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GII79_00730	COG0088	Forms part of the polypeptide exit tunnel
GII79_00735	COG0089	rRNA binding
GII79_00740	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GII79_00745	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GII79_00750	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GII79_00755	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GII79_00760	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GII79_00765	COG0255	Belongs to the universal ribosomal protein uL29 family
GII79_00770	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GII79_00775	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GII79_00785	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GII79_00795	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GII79_00800	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GII79_00805	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GII79_00810	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GII79_00815	COG1841	ribosomal large subunit assembly
GII79_00820	COG0200	Binds to the 23S rRNA
GII79_00825	COG0201	protein transport
GII79_00830	COG0563	adenylate kinase activity
GII79_00835	COG0024	Methionine aminopeptidase
GII79_00840	COG2163	COG2163 Ribosomal protein L14E L6E L27E
GII79_00845	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GII79_00850	COG0257	Belongs to the bacterial ribosomal protein bL36 family
GII79_00855	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GII79_00860	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GII79_00865	COG0202	RNA polymerase activity
GII79_00870	COG0203	ribosomal protein L17
GII79_00875	COG1122	ATPase activity
GII79_00880	COG1122	ATPase activity
GII79_00885	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GII79_00890	COG0101	tRNA pseudouridine synthase activity
GII79_00895	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GII79_00900	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GII79_00905	COG2226	methyltransferase
GII79_00915	COG0860	N-Acetylmuramoyl-L-alanine amidase
GII79_00920	COG0489	protein tyrosine kinase activity
GII79_00930	COG2194	sulfuric ester hydrolase activity
GII79_00935	COG0726	polysaccharide deacetylase
GII79_01015	COG0659	secondary active sulfate transmembrane transporter activity
GII79_01020	COG0385	Bile acid
GII79_01025	COG2819	hydrolase of the alpha beta superfamily
GII79_01030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_01035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_01040	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GII79_01045	COG2207	Transcriptional regulator
GII79_01045	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GII79_01050	COG3876	Protein conserved in bacteria
GII79_01055	COG1472	Belongs to the glycosyl hydrolase 3 family
GII79_01060	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GII79_01065	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_01065	COG1263	PTS System
GII79_01070	COG1737	Transcriptional regulator
GII79_01075	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GII79_01080	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_01085	COG1683	Conserved Protein
GII79_01115	COG1595	DNA-templated transcription, initiation
GII79_01120	COG5662	AntiSigma factor
GII79_01125	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GII79_01130	COG4856	YbbR-like protein
GII79_01135	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GII79_01145	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
GII79_01155	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GII79_01160	COG2169	Transcriptional regulator
GII79_01165	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GII79_01170	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GII79_01175	COG3002	Belongs to the UPF0753 family
GII79_01180	COG0288	reversible hydration of carbon dioxide
GII79_01190	COG5609	conserved protein (DUF2294)
GII79_01195	COG0640	Transcriptional regulator
GII79_01200	COG2814	Major facilitator Superfamily
GII79_01215	COG1404	Belongs to the peptidase S8 family
GII79_01235	COG1132	(ABC) transporter
GII79_01240	COG0596	Alpha beta hydrolase
GII79_01245	COG0745	RESPONSE REGULATOR receiver
GII79_01250	COG0642	Histidine kinase
GII79_01260	COG0515	serine threonine protein kinase
GII79_01275	COG1113	amino acid transport
GII79_01290	COG2602	Beta-lactamase
GII79_01295	COG2124	cytochrome p450
GII79_01305	COG0531	amino acid
GII79_01310	COG0584	glycerophosphoryl diester phosphodiesterase
GII79_01315	COG2271	Major facilitator Superfamily
GII79_01325	COG1846	Transcriptional regulator
GII79_01325	COG0456	acetyltransferase
GII79_01330	COG2271	Major facilitator Superfamily
GII79_01340	COG3409	Peptidoglycan-binding domain 1 protein
GII79_01345	COG0697	spore germination
GII79_01350	COG2207	Transcriptional regulator
GII79_01350	COG1917	Cupin 2, conserved barrel domain protein
GII79_01355	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GII79_01360	COG3591	Belongs to the peptidase S1B family
GII79_01370	COG0596	Alpha beta hydrolase
GII79_01375	COG1183	phosphatidylcholine synthase activity
GII79_01380	COG0586	Pfam SNARE associated Golgi protein
GII79_01385	COG0688	phosphatidylethanolamine metabolic process
GII79_01395	COG2312	Erythromycin esterase
GII79_01405	COG1301	dicarboxylic acid transport
GII79_01410	COG2190	(PTS) system
GII79_01410	COG1263	PTS System
GII79_01410	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_01415	COG0363	glucosamine-6-phosphate deaminase activity
GII79_01430	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GII79_01435	COG0833	amino acid
GII79_01440	COG2040	homocysteine
GII79_01450	COG1115	amino acid carrier protein
GII79_01455	COG2066	Belongs to the glutaminase family
GII79_01460	COG4191	Histidine kinase
GII79_01465	COG0784	Response regulator, receiver
GII79_01470	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GII79_01475	COG1012	belongs to the aldehyde dehydrogenase family
GII79_01480	COG2271	Major facilitator Superfamily
GII79_01485	COG4948	Mandelate Racemase Muconate Lactonizing
GII79_01490	COG2186	Transcriptional regulator
GII79_01495	COG2721	sulfolactate sulfo-lyase activity
GII79_01500	COG3173	Aminoglycoside phosphotransferase
GII79_01515	COG0745	RESPONSE REGULATOR receiver
GII79_01520	COG2205	protein histidine kinase activity
GII79_01525	COG1131	(ABC) transporter
GII79_01545	COG3773	Cell wall hydrolase
GII79_01550	COG2304	oxidoreductase activity
GII79_01560	COG3540	Alkaline phosphatase
GII79_01565	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GII79_01570	COG0805	protein transport
GII79_01575	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GII79_01580	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GII79_01585	COG0477	Major facilitator Superfamily
GII79_01590	COG1309	transcriptional regulator
GII79_01595	COG0252	asparaginase activity
GII79_01600	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
GII79_01605	COG1714	RDD family
GII79_01610	COG3012	SEC-C Motif Domain Protein
GII79_01610	COG1405	negative regulation of cell septum assembly
GII79_01615	COG3290	protein histidine kinase activity
GII79_01620	COG3279	Response regulator of the LytR AlgR family
GII79_01625	COG4555	ABC transporter
GII79_01630	COG1668	transmembrane transport
GII79_01635	COG0667	Aldo Keto reductase
GII79_01650	COG1595	DNA-templated transcription, initiation
GII79_01655	COG1595	DNA-templated transcription, initiation
GII79_01660	COG1876	peptidase activity
GII79_01665	COG0457	Tetratricopeptide repeat
GII79_01670	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_01675	COG0366	Alpha amylase catalytic
GII79_01680	COG0803	Belongs to the bacterial solute-binding protein 9 family
GII79_01685	COG1121	(ABC) transporter
GII79_01690	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GII79_01695	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GII79_01700	COG2310	stress, protein
GII79_01705	COG2310	stress, protein
GII79_01710	COG2310	stress, protein
GII79_01715	COG0861	Integral membrane protein TerC family
GII79_01725	COG3853	Toxic anion resistance protein (TelA)
GII79_01730	COG0477	Major facilitator Superfamily
GII79_01735	COG2814	Major facilitator Superfamily
GII79_01740	COG0640	Transcriptional regulator
GII79_01745	COG4175	Glycine betaine
GII79_01745	COG0517	IMP dehydrogenase activity
GII79_01750	COG4176	ABC-type proline glycine betaine transport system permease component
GII79_01755	COG2113	Glycine betaine
GII79_01760	COG1473	amidohydrolase
GII79_01765	COG1288	antiporter activity
GII79_01775	COG0366	Alpha amylase catalytic
GII79_01780	COG0039	L-malate dehydrogenase activity
GII79_01785	COG1620	l-lactate permease
GII79_01790	COG2814	Major facilitator Superfamily
GII79_01795	COG1846	Transcriptional regulator
GII79_01800	COG1280	lysine exporter protein (LysE YggA)
GII79_01805	COG3403	YqcI/YcgG family
GII79_01810	COG1113	amino acid transport
GII79_01815	COG3665	Urea carboxylase-associated protein
GII79_01820	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
GII79_01825	COG1660	Displays ATPase and GTPase activities
GII79_01830	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GII79_01835	COG2226	methyltransferase
GII79_01840	COG0583	DNA-binding transcription factor activity
GII79_01845	COG3458	cephalosporin-C deacetylase activity
GII79_01850	COG3541	Predicted nucleotidyltransferase
GII79_01855	COG0506	proline dehydrogenase activity
GII79_01860	COG1012	belongs to the aldehyde dehydrogenase family
GII79_01865	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GII79_01870	COG2508	Transcriptional regulator
GII79_01875	COG3689	TIGRFAM TIGR03943 family protein
GII79_01880	COG0701	Predicted permease
GII79_01885	COG2267	carboxylic ester hydrolase activity
GII79_01890	COG0492	ferredoxin-NADP+ reductase activity
GII79_01895	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
GII79_01895	COG1587	Uroporphyrinogen-III synthase
GII79_01900	COG2146	nitrite reductase [NAD(P)H] activity
GII79_01905	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GII79_01910	COG0243	molybdopterin cofactor binding
GII79_01915	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GII79_01920	COG2223	nitrite transmembrane transporter activity
GII79_01925	COG1469	GTP cyclohydrolase I activity
GII79_01930	COG1376	ErfK ybiS ycfS ynhG family protein
GII79_01940	COG0523	cobalamin synthesis protein
GII79_01945	COG0765	amino acid transport
GII79_01950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GII79_01960	COG1714	RDD family
GII79_01970	COG2723	6-phospho-beta-galactosidase activity
GII79_01980	COG3209	COG3209 Rhs family protein
GII79_01985	COG0840	transmembrane signaling receptor activity
GII79_01985	COG3290	protein histidine kinase activity
GII79_01990	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
GII79_01995	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
GII79_02000	COG1733	regulation of RNA biosynthetic process
GII79_02005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_02010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_02015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_02020	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
GII79_02025	COG2814	Major facilitator Superfamily
GII79_02035	COG0697	spore germination
GII79_02050	COG2364	Membrane
GII79_02055	COG1126	abc transporter atp-binding protein
GII79_02060	COG0765	amino acid transport
GII79_02065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GII79_02070	COG0583	DNA-binding transcription factor activity
GII79_02075	COG0163	prenyltransferase activity
GII79_02080	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
GII79_02095	COG0596	Alpha beta hydrolase
GII79_02100	COG3104	oligopeptide transport
GII79_02105	COG5434	Belongs to the glycosyl hydrolase 28 family
GII79_02115	COG0697	spore germination
GII79_02125	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GII79_02130	COG1136	(ABC) transporter
GII79_02135	COG0577	efflux transmembrane transporter activity
GII79_02140	COG0745	RESPONSE REGULATOR receiver
GII79_02145	COG3850	Histidine kinase
GII79_02145	COG5002	protein histidine kinase activity
GII79_02150	COG0457	Tetratricopeptide repeat
GII79_02170	COG0527	aspartate kinase activity
GII79_02175	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_02180	COG4605	iron ion homeostasis
GII79_02185	COG4604	ABC transporter, ATP-binding protein
GII79_02190	COG4607	ABC-type enterochelin transport system periplasmic component
GII79_02195	COG2814	Major facilitator Superfamily
GII79_02200	COG1309	transcriptional regulator
GII79_02205	COG0778	Nitroreductase
GII79_02210	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GII79_02215	COG0640	Transcriptional regulator
GII79_02220	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GII79_02225	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GII79_02230	COG1012	belongs to the aldehyde dehydrogenase family
GII79_02235	COG4975	Glucose uptake
GII79_02240	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_02245	COG4549	nuclear export factor GLE1
GII79_02250	COG2372	response to copper ion
GII79_02250	COG1276	copper resistance
GII79_02255	COG1349	DNA-binding transcription factor activity
GII79_02265	COG2213	PTS system mannitol-specific
GII79_02270	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_02275	COG0246	Mannitol dehydrogenase
GII79_02280	COG0473	3-isopropylmalate dehydrogenase activity
GII79_02285	COG0681	Belongs to the peptidase S26 family
GII79_02290	COG0412	Dienelactone hydrolase
GII79_02295	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GII79_02305	COG0561	phosphatase activity
GII79_02310	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
GII79_02315	COG1914	H( )-stimulated, divalent metal cation uptake system
GII79_02320	COG4336	lyase activity
GII79_02325	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
GII79_02330	COG1984	allophanate hydrolase subunit 2
GII79_02335	COG1414	Transcriptional regulator
GII79_02340	COG2755	lipolytic protein G-D-S-L family
GII79_02350	COG2329	Antibiotic biosynthesis monooxygenase
GII79_02355	COG0768	penicillin binding
GII79_02360	COG4989	oxidoreductase activity
GII79_02365	COG3711	transcriptional antiterminator
GII79_02370	COG0318	PFAM AMP-dependent synthetase and ligase
GII79_02375	COG2226	methyltransferase
GII79_02380	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_02385	COG1917	Cupin 2, conserved barrel domain protein
GII79_02390	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_02395	COG3871	stress protein (general stress protein 26)
GII79_02405	COG2814	Major facilitator Superfamily
GII79_02410	COG1522	sequence-specific DNA binding
GII79_02415	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GII79_02415	COG0551	DNA topoisomerase type I activity
GII79_02420	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
GII79_02425	COG3706	GGDEF domain
GII79_02430	COG5298	Protein conserved in bacteria
GII79_02435	COG1215	transferase activity, transferring glycosyl groups
GII79_02445	COG0531	amino acid
GII79_02450	COG0494	nUDIX hydrolase
GII79_02455	COG0028	Belongs to the TPP enzyme family
GII79_02470	COG1914	H( )-stimulated, divalent metal cation uptake system
GII79_02475	COG2261	transglycosylase associated protein
GII79_02480	COG4876	unkown
GII79_02485	COG2217	Heavy metal translocating P-type atpase
GII79_02490	COG3729	General stress protein
GII79_02495	COG0662	Cupin 2, conserved barrel domain protein
GII79_02500	COG2329	Antibiotic biosynthesis monooxygenase
GII79_02505	COG3546	catalase activity
GII79_02510	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GII79_02515	COG3290	protein histidine kinase activity
GII79_02520	COG4565	transcriptional regulatory protein
GII79_02525	COG1301	dicarboxylic acid transport
GII79_02530	COG0628	permease
GII79_02535	COG1131	(ABC) transporter
GII79_02540	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
GII79_02550	COG1960	acyl-CoA dehydrogenase activity
GII79_02565	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GII79_02570	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_02575	COG1181	Belongs to the D-alanine--D-alanine ligase family
GII79_02580	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GII79_02585	COG0513	Belongs to the DEAD box helicase family
GII79_02590	COG3402	PFAM membrane-flanked domain
GII79_02595	COG3428	Bacterial PH domain
GII79_02600	COG0705	Rhomboid family
GII79_02605	COG0736	holo-[acyl-carrier-protein] synthase activity
GII79_02610	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
GII79_02615	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GII79_02620	COG0864	Transcriptional regulator
GII79_02625	COG2337	Toxic component of a toxin-antitoxin (TA) module
GII79_02630	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_02635	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_02640	COG2172	sigma factor antagonist activity
GII79_02645	COG2208	phosphoserine phosphatase activity
GII79_02650	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_02655	COG2172	sigma factor antagonist activity
GII79_02660	COG1191	sigma factor activity
GII79_02665	COG2208	phosphoserine phosphatase activity
GII79_02670	COG2183	response to ionizing radiation
GII79_02680	COG3091	SprT-like family
GII79_02720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_02765	COG1476	TRANSCRIPTIONal
GII79_02785	COG0693	protein deglycase activity
GII79_02790	COG1278	Cold shock
GII79_02795	COG1329	Transcriptional regulator
GII79_02800	COG0697	spore germination
GII79_02805	COG1917	Cupin 2, conserved barrel domain protein
GII79_02805	COG2207	Transcriptional regulator
GII79_02810	COG0697	spore germination
GII79_02815	COG2207	Transcriptional regulator
GII79_02815	COG3708	Transcriptional regulator
GII79_02820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GII79_02825	COG0477	Major facilitator Superfamily
GII79_02835	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
GII79_02870	COG1309	transcriptional regulator
GII79_02875	COG0697	spore germination
GII79_02880	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GII79_02885	COG2030	dehydratase
GII79_02890	COG3545	Serine hydrolase
GII79_02895	COG1733	regulation of RNA biosynthetic process
GII79_02900	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GII79_02905	COG2814	Major facilitator Superfamily
GII79_02910	COG1309	transcriptional regulator
GII79_02920	COG0640	Transcriptional regulator
GII79_02925	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GII79_02935	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_02940	COG0697	spore germination
GII79_02945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GII79_02950	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GII79_02955	COG0640	Transcriptional regulator
GII79_02960	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GII79_02975	COG4585	Histidine kinase
GII79_02980	COG2197	response regulator
GII79_02985	COG2409	Drug exporters of the RND superfamily
GII79_02990	COG0596	Alpha beta hydrolase
GII79_02995	COG1811	Na channel or pump
GII79_03000	COG4978	Transcriptional regulator
GII79_03000	COG0789	Transcriptional regulator
GII79_03005	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GII79_03010	COG0778	Nitroreductase
GII79_03015	COG0346	lactoylglutathione lyase activity
GII79_03020	COG2259	Doxx family
GII79_03025	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_03040	COG2323	membrane
GII79_03045	COG2323	membrane
GII79_03050	COG0071	Belongs to the small heat shock protein (HSP20) family
GII79_03065	COG1309	transcriptional regulator
GII79_03075	COG0456	acetyltransferase
GII79_03085	COG0673	inositol 2-dehydrogenase activity
GII79_03090	COG1609	Transcriptional regulator
GII79_03095	COG2814	Major facilitator Superfamily
GII79_03110	COG1113	amino acid transport
GII79_03115	COG2318	DinB family
GII79_03120	COG1846	Transcriptional regulator
GII79_03125	COG1033	growth of symbiont in host cell
GII79_03125	COG2409	Drug exporters of the RND superfamily
GII79_03130	COG0778	Nitroreductase
GII79_03135	COG1846	Transcriptional regulator
GII79_03140	COG2814	Major facilitator Superfamily
GII79_03145	COG0730	response to heat
GII79_03150	COG1802	Transcriptional regulator
GII79_03155	COG1388	LysM domain
GII79_03155	COG3858	chitin binding
GII79_03160	COG1819	glycosyl
GII79_03170	COG1785	Belongs to the alkaline phosphatase family
GII79_03175	COG5646	InterPro IPR014922
GII79_03185	COG0454	-acetyltransferase
GII79_03190	COG1078	dGTPase activity
GII79_03195	COG1388	LysM domain
GII79_03200	COG2814	Major facilitator Superfamily
GII79_03205	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GII79_03210	COG1447	Phosphotransferase system cellobiose-specific component IIA
GII79_03215	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GII79_03220	COG2723	6-phospho-beta-galactosidase activity
GII79_03225	COG2188	Transcriptional regulator
GII79_03230	COG1940	carbohydrate kinase activity
GII79_03235	COG1482	cell wall glycoprotein biosynthetic process
GII79_03240	COG4124	Belongs to the glycosyl hydrolase 26 family
GII79_03285	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
GII79_03290	COG0802	atpase or kinase
GII79_03295	COG1214	PFAM Peptidase M22, glycoprotease
GII79_03300	COG0456	acetyltransferase
GII79_03305	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GII79_03310	COG0488	(ABC) transporter
GII79_03315	COG0315	cyclic pyranopterin monophosphate synthase activity
GII79_03320	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GII79_03325	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GII79_03330	COG0805	protein transport
GII79_03340	COG1266	CAAX protease self-immunity
GII79_03345	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GII79_03350	COG0459	protein refolding
GII79_03360	COG1073	alpha beta
GII79_03365	COG0457	Tetratricopeptide repeat
GII79_03370	COG1063	alcohol dehydrogenase
GII79_03375	COG2211	Major facilitator Superfamily
GII79_03380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GII79_03385	COG1842	Phage shock protein A
GII79_03390	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GII79_03395	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
GII79_03400	COG4260	virion core protein, lumpy skin disease virus
GII79_03410	COG2814	Major facilitator Superfamily
GII79_03415	COG1063	alcohol dehydrogenase
GII79_03420	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GII79_03425	COG0823	Involved in the tonB-independent uptake of proteins
GII79_03440	COG2267	carboxylic ester hydrolase activity
GII79_03450	COG2132	Multicopper oxidase
GII79_03455	COG1113	amino acid transport
GII79_03465	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GII79_03470	COG0714	Associated with various cellular activities
GII79_03475	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
GII79_03480	COG1305	Transglutaminase-like
GII79_03485	COG0519	Catalyzes the synthesis of GMP from XMP
GII79_03485	COG0518	GMP synthase (glutamine-hydrolyzing) activity
GII79_03490	COG2252	PERMEase
GII79_03495	COG3064	Membrane
GII79_03505	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
GII79_03515	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GII79_03520	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GII79_03525	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GII79_03530	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GII79_03535	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GII79_03540	COG0047	phosphoribosylformylglycinamidine synthase activity
GII79_03545	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GII79_03550	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GII79_03555	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
GII79_03560	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GII79_03565	COG0138	bifunctional purine biosynthesis protein purh
GII79_03570	COG0151	Belongs to the GarS family
GII79_03575	COG1522	sequence-specific DNA binding
GII79_03580	COG0531	amino acid
GII79_03590	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
GII79_03595	COG1470	cell adhesion involved in biofilm formation
GII79_03600	COG4496	protein, YerC YecD
GII79_03605	COG0069	glutamate synthase activity
GII79_03610	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
GII79_03615	COG0210	DNA helicase
GII79_03620	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GII79_03625	COG4851	CamS sex pheromone cAM373 precursor
GII79_03630	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GII79_03635	COG1285	pathogenesis
GII79_03640	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GII79_03645	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GII79_03650	COG0154	amidase activity
GII79_03655	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GII79_03660	COG1309	transcriptional regulator
GII79_03665	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GII79_03670	COG1597	lipid kinase activity
GII79_03675	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GII79_03705	COG5444	nuclease activity
GII79_03715	COG3586	endonuclease activity
GII79_03725	COG0457	Tetratricopeptide repeat
GII79_03735	COG0217	transcriptional regulatory protein
GII79_03745	COG1309	transcriptional regulator
GII79_03750	COG3631	Ketosteroid isomerase-related protein
GII79_03755	COG0702	epimerase
GII79_03770	COG3546	catalase activity
GII79_03775	COG0454	-acetyltransferase
GII79_03785	COG5578	integral membrane protein
GII79_03790	COG2972	Histidine kinase
GII79_03795	COG4753	response regulator
GII79_03795	COG2207	Transcriptional regulator
GII79_03800	COG1653	transport
GII79_03805	COG1175	transmembrane transport
GII79_03810	COG0395	ABC-type sugar transport system, permease component
GII79_03815	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
GII79_03820	COG2207	Transcriptional regulator
GII79_03825	COG2755	lipolytic protein G-D-S-L family
GII79_03835	COG5578	integral membrane protein
GII79_03840	COG3401	FG-GAP repeat protein
GII79_03845	COG3401	FG-GAP repeat protein
GII79_03850	COG2755	lipolytic protein G-D-S-L family
GII79_03855	COG1874	Beta-galactosidase
GII79_03865	COG1653	transport
GII79_03870	COG4209	transmembrane transport
GII79_03875	COG0395	ABC-type sugar transport system, permease component
GII79_03880	COG1486	melibiose metabolic process
GII79_03885	COG2323	membrane
GII79_03890	COG2329	Antibiotic biosynthesis monooxygenase
GII79_03895	COG0346	lactoylglutathione lyase activity
GII79_03910	COG5583	Uncharacterized small protein (DUF2292)
GII79_03915	COG0670	Belongs to the BI1 family
GII79_03920	COG0697	spore germination
GII79_03925	COG1846	Transcriptional regulator
GII79_03930	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GII79_03945	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GII79_03945	COG2124	cytochrome p450
GII79_03950	COG1368	sulfuric ester hydrolase activity
GII79_03955	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
GII79_03960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GII79_03965	COG1442	glycosyl transferase family 8
GII79_03970	COG1216	Glycosyl transferase, family 2
GII79_03975	COG1442	glycosyl transferase family 8
GII79_03980	COG2223	nitrite transmembrane transporter activity
GII79_03985	COG1011	Hydrolase
GII79_03990	COG0531	amino acid
GII79_03995	COG1012	belongs to the aldehyde dehydrogenase family
GII79_04000	COG0840	transmembrane signaling receptor activity
GII79_04005	COG0488	(ABC) transporter
GII79_04015	COG0789	Transcriptional regulator
GII79_04020	COG2814	Major facilitator Superfamily
GII79_04030	COG0488	(ABC) transporter
GII79_04035	COG0513	Belongs to the DEAD box helicase family
GII79_04040	COG0456	acetyltransferase
GII79_04045	COG2130	NADP-dependent
GII79_04050	COG2211	Major facilitator Superfamily
GII79_04055	COG1262	PFAM Formylglycine-generating sulfatase enzyme
GII79_04060	COG1120	ATPase activity
GII79_04065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_04070	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_04075	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
GII79_04090	COG3866	Pectate lyase
GII79_04095	COG0471	metal ion transport
GII79_04100	COG3290	protein histidine kinase activity
GII79_04105	COG4565	transcriptional regulatory protein
GII79_04110	COG3181	Tripartite tricarboxylate transporter family receptor
GII79_04115	COG2851	Citrate transporter
GII79_04120	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_04125	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
GII79_04130	COG1254	Belongs to the acylphosphatase family
GII79_04135	COG2258	MOSC domain
GII79_04155	COG0024	Methionine aminopeptidase
GII79_04160	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_04160	COG1263	PTS System
GII79_04165	COG1368	sulfuric ester hydrolase activity
GII79_04180	COG1115	amino acid carrier protein
GII79_04185	COG0531	amino acid
GII79_04200	COG0697	spore germination
GII79_04205	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_04205	COG1263	PTS System
GII79_04210	COG0366	Alpha amylase catalytic
GII79_04215	COG2188	Transcriptional regulator
GII79_04220	COG0778	Nitroreductase
GII79_04225	COG0737	Belongs to the 5'-nucleotidase family
GII79_04230	COG0693	protein deglycase activity
GII79_04235	COG2814	Major facilitator Superfamily
GII79_04240	COG4840	Belongs to the UPF0435 family
GII79_04245	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GII79_04250	COG4980	gas vesicle protein
GII79_04255	COG1295	ribonuclease BN
GII79_04260	COG0477	Major facilitator Superfamily
GII79_04265	COG0387	Pfam Sodium calcium exchanger
GII79_04275	COG0668	transmembrane transport
GII79_04280	COG0535	radical SAM domain protein
GII79_04290	COG0726	polysaccharide deacetylase
GII79_04295	COG2084	Dehydrogenase
GII79_04300	COG0598	Magnesium transport protein CorA
GII79_04305	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GII79_04310	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GII79_04320	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GII79_04325	COG4637	Psort location Cytoplasmic, score
GII79_04330	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GII79_04335	COG0022	dehydrogenase e1 component
GII79_04340	COG0508	dehydrogenase complex catalyzes the overall conversion of
GII79_04345	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GII79_04350	COG3284	Transcriptional regulator
GII79_04360	COG1742	UPF0060 membrane protein
GII79_04385	COG4842	Belongs to the WXG100 family
GII79_04390	COG1486	melibiose metabolic process
GII79_04395	COG1737	Transcriptional regulator
GII79_04400	COG1263	PTS System
GII79_04400	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_04405	COG1132	(ABC) transporter
GII79_04410	COG1132	(ABC) transporter
GII79_04415	COG2259	Doxx family
GII79_04420	COG2514	catechol 2,3-dioxygenase activity
GII79_04425	COG4585	Histidine kinase
GII79_04430	COG2197	response regulator
GII79_04435	COG1131	(ABC) transporter
GII79_04440	COG1511	domain protein
GII79_04440	COG0842	Transport permease protein
GII79_04445	COG0842	Transport permease protein
GII79_04450	COG1695	Transcriptional regulator
GII79_04455	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
GII79_04460	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
GII79_04465	COG2318	DinB family
GII79_04470	COG2814	Major facilitator Superfamily
GII79_04475	COG1846	Transcriptional regulator
GII79_04480	COG0392	lysyltransferase activity
GII79_04480	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GII79_04485	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GII79_04490	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_04495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_04500	COG0384	phenazine biosynthesis protein PhzF
GII79_04505	COG0778	Nitroreductase
GII79_04520	COG1090	epimerase
GII79_04525	COG2137	regulation of response to DNA damage stimulus
GII79_04535	COG2814	Major facilitator Superfamily
GII79_04550	COG3103	Sh3 type 3 domain protein
GII79_04555	COG5658	integral membrane protein
GII79_04560	COG0596	Alpha beta hydrolase
GII79_04565	COG0463	Glycosyl transferase, family 2
GII79_04570	COG4485	Bacterial membrane protein, YfhO
GII79_04575	COG1988	membrane-bound metal-dependent
GII79_04580	COG1194	a g-specific adenine glycosylase
GII79_04590	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_04605	COG3557	Belongs to the UPF0374 family
GII79_04610	COG1132	(ABC) transporter
GII79_04615	COG4129	membrane
GII79_04620	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
GII79_04625	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GII79_04630	COG0735	belongs to the Fur family
GII79_04740	COG4326	sporulation control protein
GII79_04750	COG5577	PFAM Coat F domain
GII79_04755	COG3340	Belongs to the peptidase S51 family
GII79_04760	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GII79_04765	COG0277	FAD linked oxidase domain protein
GII79_04775	COG0753	catalase activity
GII79_04780	COG1116	anion transmembrane transporter activity
GII79_04785	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GII79_04790	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GII79_04795	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GII79_04805	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GII79_04815	COG1476	TRANSCRIPTIONal
GII79_04825	COG3382	B3 4 domain protein
GII79_04830	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GII79_04840	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
GII79_04845	COG0789	Transcriptional regulator
GII79_04850	COG1664	Polymer-forming cytoskeletal
GII79_04855	COG1664	Polymer-forming cytoskeletal
GII79_04860	COG2766	serine protein kinase
GII79_04865	COG2718	Belongs to the UPF0229 family
GII79_04870	COG1846	Transcriptional regulator
GII79_04875	COG1566	PFAM secretion protein HlyD family protein
GII79_04880	COG2814	Major facilitator Superfamily
GII79_04885	COG0655	NAD(P)H dehydrogenase (quinone) activity
GII79_04905	COG1725	Transcriptional regulator
GII79_04910	COG1131	(ABC) transporter
GII79_04915	COG1131	(ABC) transporter
GII79_04920	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
GII79_04925	COG1278	Cold shock
GII79_04930	COG1464	Belongs to the NlpA lipoprotein family
GII79_04935	COG3706	GGDEF domain
GII79_04940	COG1823	symporter activity
GII79_04960	COG5577	PFAM Coat F domain
GII79_04965	COG1525	nuclease
GII79_04965	COG0737	Belongs to the 5'-nucleotidase family
GII79_04965	COG4085	toxin activity
GII79_04970	COG3764	Sortase (surface protein transpeptidase)
GII79_04975	COG0564	pseudouridine synthase activity
GII79_04985	COG0517	IMP dehydrogenase activity
GII79_04990	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GII79_04995	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GII79_04995	COG3153	acetyltransferase
GII79_05000	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GII79_05005	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
GII79_05010	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
GII79_05015	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GII79_05020	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GII79_05025	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GII79_05030	COG4585	Histidine kinase
GII79_05030	COG2203	Gaf domain
GII79_05035	COG2197	response regulator
GII79_05040	COG0431	NADPH-dependent FMN reductase
GII79_05055	COG0791	NLP P60 protein
GII79_05055	COG1388	LysM domain
GII79_05060	COG1959	2 iron, 2 sulfur cluster binding
GII79_05065	COG0668	transmembrane transport
GII79_05070	COG2719	SpoVR family
GII79_05075	COG1785	Belongs to the alkaline phosphatase family
GII79_05080	COG1388	LysM domain
GII79_05080	COG0791	NLP P60 protein
GII79_05085	COG0583	DNA-binding transcription factor activity
GII79_05090	COG0372	Belongs to the citrate synthase family
GII79_05095	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_05100	COG0531	amino acid
GII79_05105	COG0733	neurotransmitter:sodium symporter activity
GII79_05110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GII79_05115	COG0456	acetyltransferase
GII79_05130	COG1595	DNA-templated transcription, initiation
GII79_05135	COG0667	Aldo Keto reductase
GII79_05140	COG0204	Acyl-transferase
GII79_05145	COG1253	flavin adenine dinucleotide binding
GII79_05150	COG0789	Transcriptional regulator
GII79_05155	COG0436	Aminotransferase
GII79_05160	COG1253	flavin adenine dinucleotide binding
GII79_05165	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GII79_05170	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GII79_05175	COG0584	glycerophosphoryl diester phosphodiesterase
GII79_05185	COG0668	transmembrane transport
GII79_05190	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GII79_05195	COG0726	polysaccharide deacetylase
GII79_05200	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GII79_05205	COG1757	Na H antiporter
GII79_05210	COG0589	response to stress
GII79_05220	COG1132	(ABC) transporter
GII79_05225	COG1132	(ABC) transporter
GII79_05230	COG0702	epimerase
GII79_05250	COG0189	ligase activity
GII79_05255	COG0189	ligase activity
GII79_05260	COG4399	Belongs to the UPF0754 family
GII79_05265	COG3679	Belongs to the UPF0342 family
GII79_05270	COG4335	DNA alkylation repair
GII79_05275	COG0561	phosphatase activity
GII79_05280	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GII79_05285	COG0475	glutathione-regulated potassium exporter activity
GII79_05290	COG0490	domain, Protein
GII79_05300	COG1024	Enoyl-CoA hydratase
GII79_05310	COG4152	abc transporter atp-binding protein
GII79_05315	COG1668	transmembrane transport
GII79_05320	COG0420	3'-5' exonuclease activity
GII79_05325	COG4717	serine-type aminopeptidase activity
GII79_05330	COG3481	metal-dependent phosphohydrolase, HD sub domain
GII79_05340	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GII79_05370	COG1846	Transcriptional regulator
GII79_05375	COG4980	gas vesicle protein
GII79_05390	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GII79_05395	COG0537	adenosine 5'-monophosphoramidase activity
GII79_05400	COG1131	(ABC) transporter
GII79_05405	COG4473	ABC transporter
GII79_05415	COG1473	amidohydrolase
GII79_05420	COG3069	C4-dicarboxylate transmembrane transporter activity
GII79_05430	COG2329	Antibiotic biosynthesis monooxygenase
GII79_05435	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GII79_05440	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
GII79_05455	COG1309	transcriptional regulator
GII79_05460	COG1511	domain protein
GII79_05465	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GII79_05470	COG4377	Putative membrane peptidase family (DUF2324)
GII79_05480	COG1363	Peptidase, m42
GII79_05485	COG4405	Protein conserved in bacteria
GII79_05490	COG1301	dicarboxylic acid transport
GII79_05500	COG1234	tRNA 3'-trailer cleavage
GII79_05505	COG0095	Lipoate-protein ligase
GII79_05510	COG0702	epimerase
GII79_05515	COG0318	PFAM AMP-dependent synthetase and ligase
GII79_05525	COG0501	Belongs to the peptidase M48B family
GII79_05530	COG1404	Belongs to the peptidase S8 family
GII79_05535	COG0456	acetyltransferase
GII79_05540	COG0604	alcohol dehydrogenase
GII79_05545	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
GII79_05550	COG0406	alpha-ribazole phosphatase activity
GII79_05555	COG0183	Belongs to the thiolase family
GII79_05560	COG0318	PFAM AMP-dependent synthetase and ligase
GII79_05565	COG1268	BioY protein
GII79_05570	COG0840	transmembrane signaling receptor activity
GII79_05575	COG0723	plastoquinol--plastocyanin reductase activity
GII79_05575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GII79_05580	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_05590	COG4903	ComK protein
GII79_05595	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_05605	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GII79_05620	COG0398	Pfam SNARE associated Golgi protein
GII79_05625	COG0681	Belongs to the peptidase S26 family
GII79_05630	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GII79_05635	COG1846	Transcriptional regulator
GII79_05640	COG0738	Major facilitator superfamily
GII79_05645	COG0673	inositol 2-dehydrogenase activity
GII79_05650	COG0561	phosphatase activity
GII79_05655	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GII79_05660	COG1609	Transcriptional regulator
GII79_05665	COG3180	Ammonia monooxygenase
GII79_05670	COG0477	Major facilitator Superfamily
GII79_05670	COG2814	Major facilitator Superfamily
GII79_05675	COG4533	DNA binding
GII79_05685	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
GII79_05690	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
GII79_05695	COG1074	ATP-dependent DNA helicase activity
GII79_05700	COG0420	3'-5' exonuclease activity
GII79_05705	COG0419	ATPase involved in DNA repair
GII79_05710	COG1403	HNH endonuclease
GII79_05750	COG5337	Spore coat protein CotH
GII79_05755	COG0179	Fumarylacetoacetate (FAA) hydrolase
GII79_05765	COG1404	Belongs to the peptidase S8 family
GII79_05775	COG0367	asparagine synthase
GII79_05780	COG2318	DinB family
GII79_05785	COG1562	ergosterol biosynthetic process
GII79_05790	COG0534	Mate efflux family protein
GII79_05795	COG2207	Transcriptional regulator
GII79_05795	COG1917	Cupin 2, conserved barrel domain protein
GII79_05800	COG1609	Transcriptional regulator
GII79_05805	COG0673	inositol 2-dehydrogenase activity
GII79_05810	COG2318	DinB family
GII79_05815	COG1279	arginine transmembrane transporter activity
GII79_05820	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GII79_05825	COG1357	PFAM Pentapeptide repeats (8 copies)
GII79_05830	COG2267	carboxylic ester hydrolase activity
GII79_05835	COG0529	Catalyzes the synthesis of activated sulfate
GII79_05840	COG2046	Belongs to the sulfate adenylyltransferase family
GII79_05845	COG0175	sulfate reduction
GII79_05850	COG2045	Belongs to the ComB family
GII79_05855	COG1809	phosphosulfolactate synthase activity
GII79_05860	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GII79_05865	COG4948	Mandelate Racemase Muconate Lactonizing
GII79_05870	COG2814	Major facilitator Superfamily
GII79_05875	COG0454	-acetyltransferase
GII79_05880	COG2153	protein acetylation
GII79_05885	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
GII79_05885	COG0646	methionine synthase
GII79_05890	COG1666	GTP binding
GII79_05895	COG2996	Protein conserved in bacteria
GII79_05915	COG1695	Transcriptional regulator
GII79_05930	COG3227	Zinc metalloprotease (Elastase)
GII79_05935	COG1307	EDD domain protein, DegV family
GII79_05940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GII79_05955	COG0561	phosphatase activity
GII79_05960	COG1073	alpha beta
GII79_05965	COG2151	metal-sulfur cluster biosynthetic enzyme
GII79_05975	COG0277	FAD linked oxidase domain protein
GII79_05980	COG2271	Major facilitator Superfamily
GII79_05985	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GII79_06000	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GII79_06005	COG0505	Belongs to the CarA family
GII79_06010	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GII79_06015	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GII79_06030	COG2267	carboxylic ester hydrolase activity
GII79_06040	COG1744	ABC transporter substrate-binding protein PnrA-like
GII79_06055	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GII79_06060	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GII79_06065	COG5504	Zn-dependent protease
GII79_06070	COG0444	Belongs to the ABC transporter superfamily
GII79_06075	COG4608	Belongs to the ABC transporter superfamily
GII79_06085	COG0601	transmembrane transport
GII79_06090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GII79_06100	COG0180	Tryptophanyl-tRNA synthetase
GII79_06105	COG4166	transmembrane transport
GII79_06110	COG0601	transmembrane transport
GII79_06115	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GII79_06120	COG0444	Belongs to the ABC transporter superfamily
GII79_06125	COG4608	Belongs to the ABC transporter superfamily
GII79_06130	COG2814	Major facilitator Superfamily
GII79_06135	COG0456	acetyltransferase
GII79_06140	COG1393	Belongs to the ArsC family
GII79_06145	COG0861	Integral membrane protein TerC family
GII79_06155	COG4862	establishment of competence for transformation
GII79_06165	COG4469	Competence protein
GII79_06170	COG1164	Oligoendopeptidase f
GII79_06185	COG2346	COG2346, Truncated hemoglobins
GII79_06190	COG0741	lytic transglycosylase activity
GII79_06195	COG4116	CYTH
GII79_06205	COG2357	RelA SpoT domain protein
GII79_06210	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GII79_06215	COG0564	pseudouridine synthase activity
GII79_06220	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
GII79_06225	COG0569	domain protein
GII79_06225	COG0475	glutathione-regulated potassium exporter activity
GII79_06230	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GII79_06235	COG0352	thiamine-phosphate diphosphorylase activity
GII79_06240	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GII79_06245	COG2104	thiamine diphosphate biosynthetic process
GII79_06250	COG2022	thiamine diphosphate biosynthetic process
GII79_06255	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GII79_06260	COG0351	phosphomethylpyrimidine kinase
GII79_06265	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
GII79_06320	COG0210	DNA helicase
GII79_06330	COG2153	protein acetylation
GII79_06335	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
GII79_06340	COG2382	esterase
GII79_06345	COG0626	cystathionine gamma-synthase activity
GII79_06350	COG0626	cystathionine gamma-synthase activity
GII79_06355	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_06360	COG5505	Protein of unknown function (DUF819)
GII79_06385	COG5444	nuclease activity
GII79_06430	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GII79_06435	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_06445	COG3711	transcriptional antiterminator
GII79_06445	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_06450	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_06450	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GII79_06450	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GII79_06455	COG1482	cell wall glycoprotein biosynthetic process
GII79_06465	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_06475	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GII79_06490	COG0109	protoheme IX farnesyltransferase activity
GII79_06500	COG0726	polysaccharide deacetylase
GII79_06515	COG5504	Zn-dependent protease
GII79_06520	COG2205	protein histidine kinase activity
GII79_06530	COG3383	formate dehydrogenase (NAD+) activity
GII79_06535	COG2427	Protein of unknown function (DUF1641)
GII79_06545	COG1051	belongs to the nudix hydrolase family
GII79_06555	COG2124	cytochrome p450
GII79_06560	COG1819	glycosyl
GII79_06570	COG1587	Uroporphyrinogen-III synthase
GII79_06575	COG0390	transport system, permease component
GII79_06580	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GII79_06585	COG0697	spore germination
GII79_06590	COG4297	protein containing double-stranded beta helix domain
GII79_06600	COG1252	NADH dehydrogenase
GII79_06605	COG1904	glucuronate isomerase
GII79_06610	COG2211	Major facilitator Superfamily
GII79_06615	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
GII79_06620	COG1063	alcohol dehydrogenase
GII79_06625	COG1312	Catalyzes the dehydration of D-mannonate
GII79_06630	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_06635	COG2271	Major facilitator Superfamily
GII79_06640	COG1609	Transcriptional regulator
GII79_06645	COG0246	Mannitol dehydrogenase
GII79_06650	COG2721	sulfolactate sulfo-lyase activity
GII79_06655	COG0730	response to heat
GII79_06660	COG2318	DinB family
GII79_06665	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GII79_06670	COG0457	Tetratricopeptide repeat
GII79_06680	COG2350	Protein conserved in bacteria
GII79_06685	COG3409	Peptidoglycan-binding domain 1 protein
GII79_06685	COG5632	N-Acetylmuramoyl-L-alanine amidase
GII79_06685	COG1388	LysM domain
GII79_06695	COG4195	phage-related replication protein
GII79_06700	COG3546	catalase activity
GII79_06705	COG2856	Zn peptidase
GII79_06710	COG1396	sequence-specific DNA binding
GII79_06720	COG1522	sequence-specific DNA binding
GII79_06725	COG1484	DNA-dependent DNA replication
GII79_06745	COG1595	DNA-templated transcription, initiation
GII79_06750	COG5484	DNA packaging
GII79_06750	COG3728	DNA packaging
GII79_06755	COG1783	phage Terminase large subunit
GII79_06760	COG5518	Phage portal protein
GII79_06765	COG0338	D12 class N6 adenine-specific DNA methyltransferase
GII79_06770	COG4653	Phage capsid family
GII79_06820	COG3953	SLT domain
GII79_06820	COG3953	SLT domain
GII79_06820	COG5412	phage tail tape measure protein
GII79_06820	COG5412	phage tail tape measure protein
GII79_06825	COG1652	LysM domain
GII79_06830	COG4193	domain, Protein
GII79_06840	COG3628	GPW Gp25 family protein
GII79_06845	COG3299	homolog of phage Mu protein gp47
GII79_06850	COG3778	Protein conserved in bacteria
GII79_06890	COG3409	Peptidoglycan-binding domain 1 protein
GII79_06890	COG5632	N-Acetylmuramoyl-L-alanine amidase
GII79_06910	COG0306	phosphate transporter
GII79_06915	COG1392	Phosphate transport regulator
GII79_06920	COG0531	amino acid
GII79_06925	COG0346	lactoylglutathione lyase activity
GII79_06930	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GII79_06935	COG0463	Glycosyl transferase, family 2
GII79_06940	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GII79_06945	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GII79_06950	COG2362	D-Aminopeptidase
GII79_06955	COG0601	transmembrane transport
GII79_06960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GII79_06965	COG0444	Belongs to the ABC transporter superfamily
GII79_06970	COG4166	transmembrane transport
GII79_06975	COG1619	proteins homologs of microcin C7 resistance protein MccF
GII79_06980	COG4948	Mandelate Racemase Muconate Lactonizing
GII79_06985	COG0791	NLP P60 protein
GII79_06990	COG4608	Belongs to the ABC transporter superfamily
GII79_06995	COG2706	6-phosphogluconolactonase activity
GII79_07000	COG1834	amidinotransferase
GII79_07005	COG1607	acyl-coa hydrolase
GII79_07010	COG1017	nitric oxide dioxygenase activity
GII79_07010	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GII79_07020	COG2323	membrane
GII79_07025	COG2318	DinB family
GII79_07030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_07035	COG2076	Multidrug Resistance protein
GII79_07040	COG2076	Multidrug Resistance protein
GII79_07045	COG0788	formyltetrahydrofolate deformylase activity
GII79_07050	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GII79_07055	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GII79_07060	COG1764	response to oxidative stress
GII79_07065	COG1846	Transcriptional regulator
GII79_07070	COG1764	response to oxidative stress
GII79_07075	COG0590	tRNA wobble adenosine to inosine editing
GII79_07080	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GII79_07085	COG1404	Belongs to the peptidase S8 family
GII79_07090	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_07095	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GII79_07100	COG1122	ATPase activity
GII79_07105	COG4721	ABC-type cobalt transport system, permease component
GII79_07115	COG0745	RESPONSE REGULATOR receiver
GII79_07120	COG3850	Histidine kinase
GII79_07120	COG5002	protein histidine kinase activity
GII79_07125	COG3212	peptidase
GII79_07130	COG3212	peptidase
GII79_07140	COG2239	Acts as a magnesium transporter
GII79_07145	COG0789	Transcriptional regulator
GII79_07160	COG1846	Transcriptional regulator
GII79_07165	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GII79_07170	COG0726	polysaccharide deacetylase
GII79_07175	COG1408	metallophosphoesterase
GII79_07185	COG0463	Glycosyl transferase, family 2
GII79_07190	COG1793	dna ligase
GII79_07190	COG3285	dna ligase
GII79_07195	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
GII79_07200	COG5001	Diguanylate cyclase
GII79_07200	COG3300	MHYT domain
GII79_07205	COG0586	Pfam SNARE associated Golgi protein
GII79_07210	COG0861	Integral membrane protein TerC family
GII79_07215	COG1191	sigma factor activity
GII79_07235	COG0501	Belongs to the peptidase M48B family
GII79_07240	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GII79_07255	COG3594	Acyltransferase
GII79_07260	COG5002	protein histidine kinase activity
GII79_07265	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GII79_07275	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
GII79_07280	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
GII79_07285	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GII79_07290	COG0436	Aminotransferase
GII79_07295	COG1850	ribulose-bisphosphate carboxylase activity
GII79_07300	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
GII79_07305	COG0235	Class ii aldolase
GII79_07310	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
GII79_07315	COG3339	Conserved Protein
GII79_07330	COG3852	Histidine kinase
GII79_07335	COG1846	Transcriptional regulator
GII79_07340	COG1360	Flagellar Motor Protein
GII79_07345	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
GII79_07350	COG0542	response to heat
GII79_07355	COG3949	Membrane
GII79_07360	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
GII79_07365	COG0720	synthase
GII79_07370	COG0602	queuosine metabolic process
GII79_07375	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GII79_07380	COG1733	regulation of RNA biosynthetic process
GII79_07385	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_07390	COG4641	Protein conserved in bacteria
GII79_07390	COG1388	LysM domain
GII79_07395	COG1388	LysM domain
GII79_07400	COG3858	chitin binding
GII79_07410	COG4873	Protein conserved in bacteria
GII79_07420	COG3773	Cell wall hydrolase
GII79_07425	COG2244	polysaccharide biosynthetic process
GII79_07430	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_07435	COG2217	Heavy metal translocating P-type atpase
GII79_07445	COG0006	proline dipeptidase activity
GII79_07450	COG1609	Transcriptional regulator
GII79_07455	COG3711	transcriptional antiterminator
GII79_07460	COG2190	(PTS) system
GII79_07460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_07460	COG1263	PTS System
GII79_07465	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_07470	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GII79_07480	COG1533	DNA photolyase activity
GII79_07485	COG0456	acetyltransferase
GII79_07490	COG0840	transmembrane signaling receptor activity
GII79_07495	COG2084	Dehydrogenase
GII79_07500	COG2340	Cysteine-rich secretory protein family
GII79_07505	COG0768	penicillin binding
GII79_07510	COG4191	Histidine kinase
GII79_07515	COG0436	Aminotransferase
GII79_07525	COG0835	chemotaxis
GII79_07525	COG0784	Response regulator, receiver
GII79_07535	COG2814	Major facilitator Superfamily
GII79_07540	COG1376	ErfK ybiS ycfS ynhG family protein
GII79_07545	COG1408	metallophosphoesterase
GII79_07550	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_07555	COG2200	EAL domain
GII79_07560	COG4703	Protein of unknown function (DUF1797)
GII79_07565	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
GII79_07575	COG0517	IMP dehydrogenase activity
GII79_07580	COG0583	DNA-binding transcription factor activity
GII79_07585	COG0716	FMN binding
GII79_07595	COG0716	FMN binding
GII79_07600	COG2171	N-acyltransferase activity
GII79_07605	COG1473	amidohydrolase
GII79_07615	COG0668	transmembrane transport
GII79_07620	COG0450	alkyl hydroperoxide reductase
GII79_07625	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_07640	COG0746	molybdenum cofactor guanylyltransferase activity
GII79_07645	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GII79_07650	COG0303	'Molybdopterin
GII79_07655	COG1763	Mo-molybdopterin cofactor biosynthetic process
GII79_07660	COG0314	molybdopterin synthase activity
GII79_07665	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
GII79_07670	COG1132	(ABC) transporter
GII79_07675	COG1132	(ABC) transporter
GII79_07685	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GII79_07690	COG1136	(ABC) transporter
GII79_07695	COG0577	efflux transmembrane transporter activity
GII79_07700	COG1349	DNA-binding transcription factor activity
GII79_07705	COG1105	Belongs to the carbohydrate kinase PfkB family
GII79_07710	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_07710	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GII79_07710	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GII79_07715	COG0681	Belongs to the peptidase S26 family
GII79_07725	COG0488	(ABC) transporter
GII79_07730	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GII79_07735	COG2309	aminopeptidase activity
GII79_07745	COG1077	Cell shape determining protein MreB Mrl
GII79_07750	COG2002	toxin-antitoxin pair type II binding
GII79_07755	COG3852	Histidine kinase
GII79_07760	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
GII79_07760	COG2105	PFAM AIG2 family protein
GII79_07765	COG0569	domain protein
GII79_07770	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
GII79_07775	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GII79_07785	COG0561	phosphatase activity
GII79_07790	COG0242	peptide deformylase activity
GII79_07800	COG0497	DNA recombination
GII79_07805	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GII79_07810	COG0022	dehydrogenase e1 component
GII79_07815	COG0508	dehydrogenase complex catalyzes the overall conversion of
GII79_07820	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GII79_07825	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_07835	COG1982	Orn Lys Arg decarboxylase major
GII79_07840	COG4476	Belongs to the UPF0223 family
GII79_07845	COG4493	Belongs to the UPF0637 family
GII79_07855	COG0483	inositol monophosphate 1-phosphatase activity
GII79_07865	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
GII79_07885	COG1595	DNA-templated transcription, initiation
GII79_07915	COG4896	Protein conserved in bacteria
GII79_07925	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
GII79_07930	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
GII79_07935	COG2066	Belongs to the glutaminase family
GII79_07940	COG4838	Belongs to the UPF0358 family
GII79_07945	COG0772	Belongs to the SEDS family
GII79_07950	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GII79_07955	COG1612	heme a metabolic process
GII79_07960	COG0109	protoheme IX farnesyltransferase activity
GII79_07965	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GII79_07965	COG2010	Cytochrome c
GII79_07970	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GII79_07975	COG1845	cytochrome c oxidase, subunit III
GII79_07980	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GII79_07985	COG3336	cytochrome c oxidase
GII79_07995	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
GII79_08000	COG2340	Cysteine-rich secretory protein family
GII79_08015	COG3679	Belongs to the UPF0342 family
GII79_08020	COG4471	UPF0298 protein
GII79_08025	COG0742	ribosomal rna small subunit methyltransferase
GII79_08030	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GII79_08035	COG3314	Sporulation integral membrane protein YlbJ
GII79_08040	COG1752	Esterase of the alpha-beta hydrolase superfamily
GII79_08045	COG3480	Lon protease (S16) C-terminal proteolytic domain
GII79_08050	COG1323	Belongs to the UPF0348 family
GII79_08060	COG1399	metal-binding, possibly nucleic acid-binding protein
GII79_08065	COG0333	Belongs to the bacterial ribosomal protein bL32 family
GII79_08075	COG0454	-acetyltransferase
GII79_08080	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GII79_08085	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
GII79_08090	COG2001	Belongs to the MraZ family
GII79_08095	COG0275	rRNA processing
GII79_08100	COG4839	cell division protein FtsL
GII79_08110	COG0768	penicillin binding
GII79_08115	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GII79_08120	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GII79_08125	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GII79_08130	COG0772	Belongs to the SEDS family
GII79_08135	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GII79_08140	COG0812	UDP-N-acetylmuramate dehydrogenase activity
GII79_08145	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
GII79_08150	COG3879	Bacterial protein of unknown function (DUF881)
GII79_08155	COG3879	Bacterial protein of unknown function (DUF881)
GII79_08160	COG3856	small basic protein
GII79_08165	COG0849	cell division
GII79_08170	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GII79_08175	COG4412	M6 family metalloprotease domain protein
GII79_08175	COG1404	Belongs to the peptidase S8 family
GII79_08185	COG1191	sigma factor activity
GII79_08190	COG1191	sigma factor activity
GII79_08195	COG1119	ATPase activity
GII79_08200	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GII79_08205	COG1873	PFAM PRC-barrel domain
GII79_08215	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GII79_08220	COG1799	cell septum assembly
GII79_08225	COG0762	integral membrane protein
GII79_08230	COG2302	S4 RNA-binding domain
GII79_08235	COG3599	regulation of cell shape
GII79_08240	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GII79_08245	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GII79_08250	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GII79_08255	COG0564	pseudouridine synthase activity
GII79_08260	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GII79_08265	COG2233	PERMEase
GII79_08270	COG0540	Belongs to the ATCase OTCase family
GII79_08275	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GII79_08280	COG0505	Belongs to the CarA family
GII79_08285	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GII79_08290	COG0543	2 iron, 2 sulfur cluster binding
GII79_08295	COG0167	dihydroorotate dehydrogenase activity
GII79_08300	COG0284	orotidine-5'-phosphate decarboxylase activity
GII79_08305	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GII79_08310	COG0175	sulfate reduction
GII79_08315	COG0306	phosphate transporter
GII79_08320	COG2046	Belongs to the sulfate adenylyltransferase family
GII79_08325	COG0529	Catalyzes the synthesis of activated sulfate
GII79_08330	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
GII79_08335	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
GII79_08340	COG1648	precorrin-2 dehydrogenase activity
GII79_08350	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
GII79_08355	COG1561	YicC-like family, N-terminal region
GII79_08360	COG2052	Domain of unknown function (DUF370)
GII79_08365	COG0194	GDP metabolic process
GII79_08370	COG1758	RNA polymerase activity
GII79_08375	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GII79_08380	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GII79_08385	COG0242	peptide deformylase activity
GII79_08390	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GII79_08395	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GII79_08395	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GII79_08400	COG0820	rRNA (adenine-C2-)-methyltransferase activity
GII79_08405	COG0631	protein serine/threonine phosphatase activity
GII79_08410	COG0515	serine threonine protein kinase
GII79_08410	COG2815	serine threonine protein kinase
GII79_08415	COG1162	GTPase activity
GII79_08420	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GII79_08425	COG1564	THIamine pyrophosphokinase
GII79_08435	COG0227	Belongs to the bacterial ribosomal protein bL28 family
GII79_08440	COG1302	Protein conserved in bacteria
GII79_08445	COG1461	Dihydroxyacetone kinase
GII79_08450	COG1760	l-serine dehydratase
GII79_08455	COG1760	l-serine dehydratase
GII79_08460	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GII79_08465	COG1349	DNA-binding transcription factor activity
GII79_08465	COG2050	protein possibly involved in aromatic compounds catabolism
GII79_08470	COG0416	fatty acid biosynthetic process
GII79_08475	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GII79_08480	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_08485	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GII79_08490	COG0571	ribonuclease III activity
GII79_08495	COG1196	nuclear chromosome segregation
GII79_08500	COG0552	protein localization to endoplasmic reticulum
GII79_08510	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GII79_08515	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GII79_08520	COG0228	four-way junction DNA binding
GII79_08525	COG1837	Belongs to the UPF0109 family
GII79_08535	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GII79_08540	COG0336	Belongs to the RNA methyltransferase TrmD family
GII79_08545	COG0335	large ribosomal subunit rRNA binding
GII79_08550	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GII79_08555	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GII79_08565	COG2257	FlhB HrpN YscU SpaS Family
GII79_08570	COG0045	succinate-CoA ligase (ADP-forming) activity
GII79_08575	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GII79_08580	COG0758	DNA mediated transformation
GII79_08585	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GII79_08590	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GII79_08595	COG4974	Belongs to the 'phage' integrase family
GII79_08600	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GII79_08605	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GII79_08610	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
GII79_08615	COG1815	bacterial-type flagellum-dependent cell motility
GII79_08620	COG1558	bacterial-type flagellum-dependent cell motility
GII79_08625	COG1677	Flagellar hook-basal body complex protein FliE
GII79_08630	COG1766	The M ring may be actively involved in energy transduction
GII79_08635	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GII79_08640	COG1317	bacterial-type flagellum organization
GII79_08645	COG1157	protein secretion by the type III secretion system
GII79_08650	COG2882	bacterial-type flagellum organization
GII79_08655	COG3334	PFAM MgtE intracellular
GII79_08660	COG3144	bacterial-type flagellum assembly
GII79_08665	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GII79_08670	COG4786	Flagellar basal body rod
GII79_08675	COG1582	Flagellar protein (FlbD)
GII79_08680	COG1580	Controls the rotational direction of flagella during chemotaxis
GII79_08685	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GII79_08690	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GII79_08690	COG1776	CheC inhibitor of MCP methylation
GII79_08695	COG2201	protein-glutamate methylesterase activity
GII79_08700	COG3190	flagellar
GII79_08705	COG1338	Plays a role in the flagellum-specific transport system
GII79_08710	COG1987	bacterial-type flagellum assembly
GII79_08715	COG1684	flagellar biosynthetic protein fliR
GII79_08720	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GII79_08725	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GII79_08730	COG1419	protein localization to endoplasmic reticulum
GII79_08735	COG0455	bacterial-type flagellum organization
GII79_08740	COG2201	protein-glutamate methylesterase activity
GII79_08745	COG2198	Histidine kinase
GII79_08745	COG0643	Histidine kinase
GII79_08750	COG0835	chemotaxis
GII79_08755	COG1776	CheC inhibitor of MCP methylation
GII79_08760	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
GII79_08765	COG1191	sigma factor activity
GII79_08775	COG0052	Belongs to the universal ribosomal protein uS2 family
GII79_08780	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GII79_08785	COG0528	UMP kinase activity
GII79_08790	COG0233	cytoplasmic translational termination
GII79_08795	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GII79_08800	COG4589	Belongs to the CDS family
GII79_08805	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GII79_08810	COG0750	zinc metalloprotease
GII79_08815	COG0442	prolyl-tRNA aminoacylation
GII79_08820	COG2176	DNA-directed DNA polymerase activity
GII79_08825	COG0779	Required for maturation of 30S ribosomal subunits
GII79_08830	COG0195	Participates in both transcription termination and antitermination
GII79_08835	COG2740	Nucleic-acid-binding protein implicated in transcription termination
GII79_08840	COG1358	cellular component organization or biogenesis
GII79_08845	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GII79_08850	COG1550	Protein conserved in bacteria
GII79_08855	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GII79_08860	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GII79_08865	COG0196	riboflavin kinase activity
GII79_08870	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GII79_08875	COG1185	polyribonucleotide nucleotidyltransferase activity
GII79_08880	COG0726	polysaccharide deacetylase
GII79_08885	COG0612	Peptidase, M16
GII79_08890	COG1873	PFAM PRC-barrel domain
GII79_08895	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GII79_08900	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GII79_08905	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GII79_08910	COG0527	aspartate kinase activity
GII79_08915	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GII79_08920	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GII79_08925	COG0740	serine-type endopeptidase activity
GII79_08935	COG1674	ftsk spoiiie
GII79_08935	COG4980	gas vesicle protein
GII79_08940	COG2188	Transcriptional regulator
GII79_08945	COG2814	Major facilitator Superfamily
GII79_08950	COG0612	Peptidase, M16
GII79_08955	COG0612	Peptidase, M16
GII79_08960	COG0300	oxidoreductase activity
GII79_08975	COG1426	Protein conserved in bacteria
GII79_08980	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GII79_08985	COG1546	Belongs to the CinA family
GII79_08985	COG1058	Belongs to the CinA family
GII79_08990	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GII79_08995	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GII79_09000	COG1418	mRNA catabolic process
GII79_09005	COG1692	metallophosphoesterase
GII79_09010	COG2359	stage V sporulation protein S
GII79_09015	COG1063	alcohol dehydrogenase
GII79_09020	COG0156	8-amino-7-oxononanoate synthase activity
GII79_09025	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GII79_09030	COG4550	Control of competence regulator ComK, YlbF/YmcA
GII79_09040	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GII79_09045	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GII79_09060	COG3226	Transcriptional regulator
GII79_09065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_09075	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GII79_09080	COG3321	synthase
GII79_09085	COG2070	2-Nitropropane dioxygenase
GII79_09085	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GII79_09090	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GII79_09095	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GII79_09100	COG3425	synthase
GII79_09105	COG1024	Enoyl-CoA hydratase
GII79_09110	COG1024	Enoyl-CoA hydratase
GII79_09115	COG3321	synthase
GII79_09115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09115	COG0318	PFAM AMP-dependent synthetase and ligase
GII79_09115	COG0300	oxidoreductase activity
GII79_09115	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_09120	COG3321	synthase
GII79_09120	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GII79_09120	COG0300	oxidoreductase activity
GII79_09120	COG4221	oxidoreductase activity
GII79_09125	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09125	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_09125	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GII79_09125	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GII79_09125	COG3321	synthase
GII79_09130	COG4221	oxidoreductase activity
GII79_09130	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_09130	COG3321	synthase
GII79_09130	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09135	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GII79_09135	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GII79_09135	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
GII79_09135	COG3321	synthase
GII79_09140	COG2124	cytochrome p450
GII79_09150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_09155	COG1404	Belongs to the peptidase S8 family
GII79_09165	COG4195	phage-related replication protein
GII79_09170	COG1764	response to oxidative stress
GII79_09175	COG2076	Multidrug Resistance protein
GII79_09180	COG2076	Multidrug Resistance protein
GII79_09195	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GII79_09200	COG1923	regulation of RNA biosynthetic process
GII79_09215	COG1780	Probably involved in ribonucleotide reductase function
GII79_09220	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GII79_09225	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GII79_09230	COG4112	unkown
GII79_09235	COG0860	N-Acetylmuramoyl-L-alanine amidase
GII79_09240	COG0464	growth
GII79_09245	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GII79_09250	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
GII79_09255	COG0789	Transcriptional regulator
GII79_09260	COG0174	glutamine synthetase
GII79_09300	COG1598	PFAM Uncharacterised protein family UPF0150
GII79_09380	COG0463	Glycosyl transferase, family 2
GII79_09395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_09410	COG3655	Transcriptional regulator
GII79_09425	COG0135	phosphoribosylanthranilate isomerase activity
GII79_09435	COG2211	Major facilitator Superfamily
GII79_09440	COG3507	Belongs to the glycosyl hydrolase 43 family
GII79_09445	COG1940	carbohydrate kinase activity
GII79_09450	COG2115	Belongs to the xylose isomerase family
GII79_09455	COG1070	Carbohydrate kinase
GII79_09465	COG1525	nuclease
GII79_09470	COG2814	Major facilitator Superfamily
GII79_09475	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GII79_09485	COG0756	dUTP diphosphatase activity
GII79_09520	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GII79_09530	COG3832	glyoxalase III activity
GII79_09575	COG4195	phage-related replication protein
GII79_09585	COG0346	lactoylglutathione lyase activity
GII79_09590	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GII79_09595	COG1388	LysM domain
GII79_09600	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
GII79_09605	COG4224	UPF0291 protein
GII79_09610	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GII79_09620	COG3763	UPF0154 protein
GII79_09630	COG0785	Cytochrome C biogenesis protein
GII79_09635	COG2201	protein-glutamate methylesterase activity
GII79_09640	COG4846	Membrane protein involved in cytochrome C biogenesis
GII79_09650	COG0071	Belongs to the small heat shock protein (HSP20) family
GII79_09665	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GII79_09670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_09690	COG0824	Thioesterase
GII79_09700	COG4841	protein insertion into membrane
GII79_09705	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
GII79_09710	COG1832	CoA-binding protein
GII79_09715	COG0187	DNA topoisomerase II activity
GII79_09720	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GII79_09730	COG1115	amino acid carrier protein
GII79_09745	COG5520	Belongs to the glycosyl hydrolase 30 family
GII79_09750	COG3507	Belongs to the glycosyl hydrolase 43 family
GII79_09755	COG2246	polysaccharide biosynthetic process
GII79_09760	COG1210	Utp--glucose-1-phosphate uridylyltransferase
GII79_09765	COG0586	Pfam SNARE associated Golgi protein
GII79_09770	COG2404	hydrolase activity, acting on ester bonds
GII79_09775	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GII79_09780	COG1024	Enoyl-CoA hydratase
GII79_09785	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GII79_09790	COG0511	ligase activity, forming carbon-carbon bonds
GII79_09795	COG0439	Biotin carboxylase
GII79_09800	COG0318	PFAM AMP-dependent synthetase and ligase
GII79_09805	COG1960	acyl-CoA dehydrogenase activity
GII79_09820	COG1649	PFAM Uncharacterised BCR, COG1649
GII79_09830	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09830	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
GII79_09835	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09840	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09845	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09850	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_09855	COG2027	D-alanyl-D-alanine carboxypeptidase
GII79_09860	COG2017	converts alpha-aldose to the beta-anomer
GII79_09865	COG0534	Mate efflux family protein
GII79_09880	COG0582	viral genome integration into host DNA
GII79_09885	COG0166	Belongs to the GPI family
GII79_09890	COG0405	Gamma-glutamyltransferase
GII79_09895	COG0583	DNA-binding transcription factor activity
GII79_09900	COG0604	alcohol dehydrogenase
GII79_09905	COG0493	'glutamate synthase
GII79_09910	COG0070	glutamate synthase
GII79_09910	COG0069	glutamate synthase activity
GII79_09910	COG0067	glutamate synthase
GII79_09915	COG0583	DNA-binding transcription factor activity
GII79_09920	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GII79_09925	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GII79_09935	COG0300	oxidoreductase activity
GII79_09940	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GII79_09950	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_09965	COG2814	Major facilitator Superfamily
GII79_09970	COG1070	Carbohydrate kinase
GII79_09975	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GII79_09980	COG0243	molybdopterin cofactor binding
GII79_10010	COG5278	phosphoserine phosphatase activity
GII79_10010	COG0840	transmembrane signaling receptor activity
GII79_10015	COG2368	4-hydroxyphenylacetate
GII79_10020	COG4305	rare lipoprotein A
GII79_10025	COG3619	membrane
GII79_10030	COG3866	Pectate lyase
GII79_10035	COG2135	peptidase activity
GII79_10045	COG2140	Oxalate decarboxylase
GII79_10055	COG0456	acetyltransferase
GII79_10075	COG2720	vancomycin resistance protein
GII79_10085	COG3655	Transcriptional regulator
GII79_10090	COG3739	integral membrane protein
GII79_10095	COG0583	DNA-binding transcription factor activity
GII79_10100	COG0697	spore germination
GII79_10110	COG0693	protein deglycase activity
GII79_10115	COG2367	Beta-lactamase
GII79_10140	COG0574	Belongs to the PEP-utilizing enzyme family
GII79_10140	COG3848	Pyruvate phosphate dikinase
GII79_10145	COG0726	polysaccharide deacetylase
GII79_10150	COG2314	TM2 domain
GII79_10155	COG1396	sequence-specific DNA binding
GII79_10275	COG0457	Tetratricopeptide repeat
GII79_10310	COG4282	regulation of fungal-type cell wall biogenesis
GII79_10315	COG1231	oxidoreductase activity
GII79_10320	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GII79_10325	COG0662	Cupin 2, conserved barrel domain protein
GII79_10325	COG2207	Transcriptional regulator
GII79_10330	COG0456	acetyltransferase
GII79_10335	COG1309	transcriptional regulator
GII79_10340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_10345	COG3708	Transcriptional regulator
GII79_10350	COG2378	regulation of single-species biofilm formation
GII79_10360	COG0640	Transcriptional regulator
GII79_10365	COG0741	lytic transglycosylase activity
GII79_10370	COG2322	membrane
GII79_10385	COG1619	proteins homologs of microcin C7 resistance protein MccF
GII79_10390	COG3239	Fatty acid desaturase
GII79_10395	COG4585	Histidine kinase
GII79_10400	COG2197	response regulator
GII79_10405	COG1388	LysM domain
GII79_10405	COG3584	3D domain protein
GII79_10410	COG0514	ATP-dependent DNA helicase (RecQ)
GII79_10420	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GII79_10425	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GII79_10440	COG0071	Belongs to the small heat shock protein (HSP20) family
GII79_10465	COG1012	belongs to the aldehyde dehydrogenase family
GII79_10470	COG1657	PFAM Prenyltransferase squalene oxidase
GII79_10475	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GII79_10480	COG0733	neurotransmitter:sodium symporter activity
GII79_10485	COG0385	Bile acid
GII79_10490	COG0508	dehydrogenase complex catalyzes the overall conversion of
GII79_10495	COG0567	Dehydrogenase, E1 component
GII79_10500	COG4548	von Willebrand factor, type A
GII79_10505	COG0714	Associated with various cellular activities
GII79_10510	COG2032	superoxide dismutase activity
GII79_10515	COG0791	NLP P60 protein
GII79_10515	COG1388	LysM domain
GII79_10520	COG1819	glycosyl
GII79_10525	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GII79_10530	COG0534	Mate efflux family protein
GII79_10535	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_10540	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
GII79_10545	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
GII79_10555	COG2962	Rard protein
GII79_10570	COG2610	gluconate transmembrane transporter activity
GII79_10575	COG1942	4-Oxalocrotonate Tautomerase
GII79_10580	COG1733	regulation of RNA biosynthetic process
GII79_10585	COG0778	Nitroreductase
GII79_10590	COG0400	carboxylic ester hydrolase activity
GII79_10595	COG0346	lactoylglutathione lyase activity
GII79_10605	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GII79_10610	COG3409	Peptidoglycan-binding domain 1 protein
GII79_10610	COG0793	Belongs to the peptidase S41A family
GII79_10615	COG2226	methyltransferase
GII79_10625	COG1876	peptidase activity
GII79_10630	COG0813	purine-nucleoside phosphorylase activity
GII79_10645	COG0671	phosphoesterase, PA-phosphatase related
GII79_10665	COG4479	Belongs to the UPF0346 family
GII79_10675	COG1509	lysine 2,3-aminomutase activity
GII79_10680	COG0456	acetyltransferase
GII79_10685	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GII79_10690	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GII79_10695	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GII79_10700	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GII79_10715	COG0456	acetyltransferase
GII79_10720	COG0463	Glycosyl transferase, family 2
GII79_10735	COG4641	Protein conserved in bacteria
GII79_10740	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
GII79_10745	COG1086	Polysaccharide biosynthesis protein
GII79_10750	COG3331	DNA recombination
GII79_10845	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_10850	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GII79_10870	COG1372	Participates in initiation and elongation during chromosome replication
GII79_10870	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GII79_10875	COG1780	Probably involved in ribonucleotide reductase function
GII79_10965	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GII79_10980	COG3584	3D domain protein
GII79_10985	COG0587	DNA-directed DNA polymerase activity
GII79_10990	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GII79_10995	COG0358	DNA primase activity
GII79_11000	COG0305	Participates in initiation and elongation during chromosome replication
GII79_11010	COG2887	Belongs to the helicase family. UvrD subfamily
GII79_11040	COG3420	alginic acid biosynthetic process
GII79_11040	COG5434	Belongs to the glycosyl hydrolase 28 family
GII79_11045	COG4195	phage-related replication protein
GII79_11065	COG2135	peptidase activity
GII79_11070	COG1793	dna ligase
GII79_11160	COG3646	Phage regulatory protein
GII79_11160	COG3645	SOS response
GII79_11195	COG3655	Transcriptional regulator
GII79_11280	COG3655	Transcriptional regulator
GII79_11355	COG0776	regulation of translation
GII79_11385	COG4373	Mu-like prophage FluMu protein gp28
GII79_11485	COG0582	viral genome integration into host DNA
GII79_11490	COG1396	sequence-specific DNA binding
GII79_11500	COG0741	lytic transglycosylase activity
GII79_11500	COG1196	nuclear chromosome segregation
GII79_11500	COG0739	heme binding
GII79_11510	COG2433	Pfam Transposase IS66
GII79_11525	COG5632	N-Acetylmuramoyl-L-alanine amidase
GII79_11540	COG0457	Tetratricopeptide repeat
GII79_11545	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GII79_11555	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GII79_11560	COG2226	methyltransferase
GII79_11565	COG2211	Major facilitator Superfamily
GII79_11570	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GII79_11610	COG5444	nuclease activity
GII79_11615	COG4282	regulation of fungal-type cell wall biogenesis
GII79_11625	COG1525	nuclease
GII79_11645	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
GII79_11650	COG1086	Polysaccharide biosynthesis protein
GII79_11655	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GII79_11660	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GII79_11665	COG1846	Transcriptional regulator
GII79_11670	COG0534	Mate efflux family protein
GII79_11680	COG4698	Protein conserved in bacteria
GII79_11685	COG2755	lipolytic protein G-D-S-L family
GII79_11690	COG1999	signal sequence binding
GII79_11700	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GII79_11705	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
GII79_11710	COG1272	protein, Hemolysin III
GII79_11715	COG0204	Acyl-transferase
GII79_11720	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GII79_11725	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GII79_11730	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GII79_11740	COG2521	methyltransferase
GII79_11740	COG2136	Putative SAM-dependent methyltransferase
GII79_11750	COG0129	dihydroxy-acid dehydratase activity
GII79_11755	COG1413	lyase activity
GII79_11760	COG1418	mRNA catabolic process
GII79_11765	COG0386	Belongs to the glutathione peroxidase family
GII79_11770	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
GII79_11775	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GII79_11785	COG1278	Cold shock
GII79_11805	COG0328	RNA-DNA hybrid ribonuclease activity
GII79_11810	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
GII79_11815	COG0328	RNA-DNA hybrid ribonuclease activity
GII79_11825	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GII79_11840	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
GII79_11850	COG1755	Isoprenylcysteine carboxyl methyltransferase
GII79_11855	COG3424	synthase
GII79_11860	COG2233	PERMEase
GII79_11865	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GII79_11870	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
GII79_11880	COG0800	Aldolase
GII79_11885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GII79_11890	COG1609	Transcriptional regulator
GII79_11895	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
GII79_11900	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_11905	COG1199	ATP-dependent helicase activity
GII79_11920	COG0116	Belongs to the methyltransferase superfamily
GII79_11935	COG4474	Belongs to the UPF0398 family
GII79_11950	COG3359	exonuclease
GII79_11955	COG1111	helicase
GII79_11955	COG1205	dead DEAH box helicase
GII79_11960	COG2190	(PTS) system
GII79_11965	COG0071	Belongs to the small heat shock protein (HSP20) family
GII79_12000	COG3331	DNA recombination
GII79_12005	COG4499	WXG100 protein secretion system (Wss), protein YukC
GII79_12005	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GII79_12015	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GII79_12020	COG3935	DnaD domain protein
GII79_12025	COG0017	Asparaginyl-tRNA synthetase
GII79_12030	COG0436	Aminotransferase
GII79_12035	COG5353	protein conserved in bacteria
GII79_12045	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GII79_12045	COG1199	ATP-dependent helicase activity
GII79_12050	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
GII79_12055	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
GII79_12060	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
GII79_12065	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
GII79_12065	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
GII79_12070	COG0617	tRNA 3'-terminal CCA addition
GII79_12075	COG0438	transferase activity, transferring glycosyl groups
GII79_12080	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
GII79_12085	COG1803	Methylglyoxal synthase
GII79_12090	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
GII79_12095	COG1694	Mazg nucleotide pyrophosphohydrolase
GII79_12100	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GII79_12110	COG4347	Protein of unknown function (DUF1405)
GII79_12115	COG2010	Cytochrome c
GII79_12115	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GII79_12120	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GII79_12125	COG0723	plastoquinol--plastocyanin reductase activity
GII79_12135	COG5582	Belongs to the UPF0302 family
GII79_12140	COG0457	Tetratricopeptide repeat
GII79_12145	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
GII79_12150	COG0287	Prephenate dehydrogenase
GII79_12160	COG0159	tryptophan synthase activity
GII79_12165	COG0133	tryptophan synthase activity
GII79_12170	COG0135	phosphoribosylanthranilate isomerase activity
GII79_12180	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GII79_12185	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GII79_12190	COG4401	Chorismate mutase type I
GII79_12195	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GII79_12200	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GII79_12205	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GII79_12210	COG0105	UTP biosynthetic process
GII79_12215	COG0142	geranyltranstransferase activity
GII79_12220	COG2226	methyltransferase
GII79_12225	COG0142	geranyltranstransferase activity
GII79_12235	COG0302	gtp cyclohydrolase
GII79_12240	COG0776	regulation of translation
GII79_12245	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
GII79_12260	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GII79_12265	COG1160	GTP binding
GII79_12290	COG1304	FMN binding
GII79_12295	COG0539	negative regulation of cytoplasmic translation
GII79_12300	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
GII79_12310	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
GII79_12315	COG2959	enzyme of heme biosynthesis
GII79_12320	COG3773	Cell wall hydrolase
GII79_12320	COG3409	Peptidoglycan-binding domain 1 protein
GII79_12325	COG2339	peptidase activity
GII79_12330	COG0492	ferredoxin-NADP+ reductase activity
GII79_12335	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GII79_12340	COG4862	establishment of competence for transformation
GII79_12345	COG1408	metallophosphoesterase
GII79_12355	COG1388	LysM domain
GII79_12360	COG1266	CAAX protease self-immunity
GII79_12365	COG0514	ATP-dependent DNA helicase (RecQ)
GII79_12370	COG4955	Helix-turn-helix domain
GII79_12375	COG1141	Ferredoxin
GII79_12380	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GII79_12385	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GII79_12390	COG0710	3-dehydroquinate dehydratase activity
GII79_12400	COG1595	DNA-templated transcription, initiation
GII79_12405	COG5002	protein histidine kinase activity
GII79_12410	COG0745	RESPONSE REGULATOR receiver
GII79_12415	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GII79_12420	COG1333	cytochrome c biogenesis protein
GII79_12425	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_12430	COG1187	pseudouridine synthase activity
GII79_12435	COG0700	Nucleoside recognition
GII79_12440	COG2715	membrane protein required for spore maturation
GII79_12445	COG1686	Belongs to the peptidase S11 family
GII79_12455	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GII79_12460	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GII79_12465	COG1547	Domain of unknown function (DUF309)
GII79_12470	COG0456	acetyltransferase
GII79_12475	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
GII79_12480	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GII79_12480	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
GII79_12485	COG0307	riboflavin synthase, alpha
GII79_12490	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GII79_12490	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GII79_12500	COG0681	Belongs to the peptidase S26 family
GII79_12510	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
GII79_12535	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GII79_12540	COG4086	secreted protein
GII79_12545	COG0019	diaminopimelate decarboxylase activity
GII79_12550	COG0697	spore germination
GII79_12565	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GII79_12585	COG1191	sigma factor activity
GII79_12590	COG2172	sigma factor antagonist activity
GII79_12595	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_12600	COG1686	Belongs to the peptidase S11 family
GII79_12605	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
GII79_12610	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
GII79_12615	COG4974	Belongs to the 'phage' integrase family
GII79_12625	COG0735	belongs to the Fur family
GII79_12630	COG1300	Membrane
GII79_12640	COG0281	malic enzyme
GII79_12645	COG1757	Na H antiporter
GII79_12650	COG1027	Aspartate ammonia-lyase
GII79_12655	COG0252	asparaginase activity
GII79_12660	COG1396	sequence-specific DNA binding
GII79_12665	COG1379	DNA repair
GII79_12670	COG0494	nUDIX hydrolase
GII79_12680	COG0667	Aldo Keto reductase
GII79_12690	COG1073	alpha beta
GII79_12700	COG4918	Iron-sulphur cluster biosynthesis
GII79_12705	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GII79_12705	COG0456	acetyltransferase
GII79_12710	COG2329	Antibiotic biosynthesis monooxygenase
GII79_12715	COG0456	acetyltransferase
GII79_12725	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GII79_12735	COG2211	Major facilitator Superfamily
GII79_12740	COG0346	lactoylglutathione lyase activity
GII79_12745	COG1072	(Pantothenic acid kinase))
GII79_12750	COG3048	D-serine ammonia-lyase activity
GII79_12755	COG0300	oxidoreductase activity
GII79_12760	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_12765	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GII79_12770	COG4187	Peptidase family M20/M25/M40
GII79_12775	COG1902	pentaerythritol trinitrate reductase activity
GII79_12780	COG0596	Alpha beta hydrolase
GII79_12790	COG1234	tRNA 3'-trailer cleavage
GII79_12795	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GII79_12800	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GII79_12805	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GII79_12815	COG0706	membrane insertase activity
GII79_12820	COG3361	conserved protein (COG2071)
GII79_12825	COG2195	Cleaves the N-terminal amino acid of tripeptides
GII79_12830	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GII79_12835	COG0346	lactoylglutathione lyase activity
GII79_12845	COG1376	ErfK ybiS ycfS ynhG family protein
GII79_12850	COG4129	membrane
GII79_12855	COG1126	abc transporter atp-binding protein
GII79_12860	COG0765	amino acid transport
GII79_12865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GII79_12875	COG1597	lipid kinase activity
GII79_12880	COG2814	Major facilitator Superfamily
GII79_12885	COG4978	Transcriptional regulator
GII79_12885	COG0789	Transcriptional regulator
GII79_12890	COG0508	dehydrogenase complex catalyzes the overall conversion of
GII79_12895	COG0022	dehydrogenase e1 component
GII79_12900	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GII79_12905	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GII79_12910	COG3426	butyrate kinase activity
GII79_12915	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GII79_12920	COG0280	phosphate acetyltransferase
GII79_12925	COG3290	protein histidine kinase activity
GII79_12925	COG3829	transcription factor binding
GII79_12935	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
GII79_12940	COG2079	MmgE PrpD family protein
GII79_12945	COG0372	Belongs to the citrate synthase family
GII79_12950	COG1960	acyl-CoA dehydrogenase activity
GII79_12955	COG1250	3-hydroxyacyl-CoA dehydrogenase
GII79_12960	COG0183	Belongs to the thiolase family
GII79_12965	COG0584	glycerophosphoryl diester phosphodiesterase
GII79_12970	COG0860	N-Acetylmuramoyl-L-alanine amidase
GII79_12985	COG1902	pentaerythritol trinitrate reductase activity
GII79_12990	COG0745	RESPONSE REGULATOR receiver
GII79_12995	COG0750	zinc metalloprotease
GII79_13000	COG0497	DNA recombination
GII79_13005	COG1438	arginine binding
GII79_13010	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
GII79_13015	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GII79_13020	COG0142	geranyltranstransferase activity
GII79_13025	COG1722	exodeoxyribonuclease VII activity
GII79_13030	COG1570	exodeoxyribonuclease VII activity
GII79_13035	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GII79_13040	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GII79_13045	COG1302	Protein conserved in bacteria
GII79_13050	COG0439	Biotin carboxylase
GII79_13055	COG0511	ligase activity, forming carbon-carbon bonds
GII79_13095	COG3854	ATPases associated with a variety of cellular activities
GII79_13105	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GII79_13110	COG0006	proline dipeptidase activity
GII79_13115	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
GII79_13125	COG3872	metal-dependent enzyme
GII79_13135	COG1752	Esterase of the alpha-beta hydrolase superfamily
GII79_13140	COG1321	iron dependent repressor
GII79_13145	COG0095	Lipoate-protein ligase
GII79_13150	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GII79_13155	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GII79_13160	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GII79_13165	COG0404	The glycine cleavage system catalyzes the degradation of glycine
GII79_13170	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GII79_13185	COG1396	sequence-specific DNA binding
GII79_13195	COG0681	Belongs to the peptidase S26 family
GII79_13220	COG4940	Competence protein ComGF
GII79_13230	COG4970	Tfp pilus assembly protein FimT
GII79_13235	COG4537	Required for transformation and DNA binding
GII79_13240	COG1459	type II secretion system
GII79_13245	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GII79_13250	COG0517	IMP dehydrogenase activity
GII79_13255	COG0598	Magnesium transport protein CorA
GII79_13260	COG1253	flavin adenine dinucleotide binding
GII79_13265	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_13275	COG1393	Belongs to the ArsC family
GII79_13285	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_13295	COG0011	TIGRFAM Protein of
GII79_13305	COG2866	Carboxypeptidase
GII79_13310	COG1368	sulfuric ester hydrolase activity
GII79_13315	COG1940	carbohydrate kinase activity
GII79_13320	COG4483	Protein conserved in bacteria
GII79_13325	COG0705	Rhomboid family
GII79_13325	COG0457	Tetratricopeptide repeat
GII79_13335	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GII79_13340	COG0267	Belongs to the bacterial ribosomal protein bL33 family
GII79_13345	COG0438	transferase activity, transferring glycosyl groups
GII79_13360	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GII79_13365	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GII79_13370	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GII79_13375	COG0581	inorganic phosphate transmembrane transporter activity
GII79_13380	COG0573	inorganic phosphate transmembrane transporter activity
GII79_13385	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GII79_13395	COG0477	Major facilitator Superfamily
GII79_13400	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GII79_13405	COG2839	Protein conserved in bacteria
GII79_13410	COG5521	maltodextrose utilization protein MalA
GII79_13415	COG1388	LysM domain
GII79_13420	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GII79_13425	COG4709	membrane
GII79_13430	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
GII79_13435	COG0735	belongs to the Fur family
GII79_13440	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GII79_13450	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GII79_13455	COG0513	Belongs to the DEAD box helicase family
GII79_13465	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GII79_13470	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GII79_13475	COG2384	SAM-dependent methyltransferase
GII79_13480	COG2010	Cytochrome c
GII79_13485	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GII79_13490	COG0358	DNA primase activity
GII79_13495	COG1671	Belongs to the UPF0178 family
GII79_13500	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
GII79_13505	COG0517	IMP dehydrogenase activity
GII79_13510	COG0751	glycine-tRNA ligase activity
GII79_13515	COG0752	glycyl-tRNA synthetase alpha subunit
GII79_13520	COG1381	Involved in DNA repair and RecF pathway recombination
GII79_13530	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GII79_13535	COG0295	cytidine deaminase activity
GII79_13540	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
GII79_13545	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GII79_13550	COG1480	7TM receptor with intracellular HD hydrolase
GII79_13555	COG1702	phosphate starvation-inducible protein PhoH
GII79_13560	COG0561	phosphatase activity
GII79_13575	COG4864	UPF0365 protein
GII79_13580	COG1030	water channel activity
GII79_13585	COG1610	YqeY-like protein
GII79_13590	COG0828	Belongs to the bacterial ribosomal protein bS21 family
GII79_13595	COG1283	sodium-dependent phosphate transmembrane transporter activity
GII79_13600	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GII79_13605	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GII79_13610	COG2264	protein methyltransferase activity
GII79_13615	COG0484	heat shock protein binding
GII79_13620	COG0443	Heat shock 70 kDa protein
GII79_13625	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GII79_13630	COG1420	regulation of RNA biosynthetic process
GII79_13635	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GII79_13640	COG0481	GTPase activity
GII79_13650	COG0860	N-Acetylmuramoyl-L-alanine amidase
GII79_13655	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
GII79_13660	COG0268	Binds directly to 16S ribosomal RNA
GII79_13665	COG1466	dna polymerase III delta subunit
GII79_13680	COG0658	competence protein
GII79_13680	COG2333	competence protein COMEC
GII79_13685	COG2131	deaminase
GII79_13690	COG1596	polysaccharide export
GII79_13690	COG1555	photosystem II stabilization
GII79_13695	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GII79_13700	COG2226	methyltransferase
GII79_13705	COG0799	negative regulation of ribosome biogenesis
GII79_13710	COG1713	HD superfamily hydrolase involved in NAD metabolism
GII79_13715	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GII79_13720	COG1534	Rna-binding protein
GII79_13725	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GII79_13730	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GII79_13735	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
GII79_13745	COG2755	lipolytic protein G-D-S-L family
GII79_13750	COG5632	N-Acetylmuramoyl-L-alanine amidase
GII79_13750	COG3409	Peptidoglycan-binding domain 1 protein
GII79_13755	COG0398	Pfam SNARE associated Golgi protein
GII79_13770	COG3209	COG3209 Rhs family protein
GII79_13780	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
GII79_13785	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GII79_13790	COG0798	PFAM Bile acid sodium symporter
GII79_13795	COG0346	lactoylglutathione lyase activity
GII79_13800	COG0640	Transcriptional regulator
GII79_13805	COG3403	YqcI/YcgG family
GII79_13825	COG0604	alcohol dehydrogenase
GII79_13850	COG0457	Tetratricopeptide repeat
GII79_13865	COG5444	nuclease activity
GII79_13890	COG3409	Peptidoglycan-binding domain 1 protein
GII79_13890	COG5632	N-Acetylmuramoyl-L-alanine amidase
GII79_13895	COG4824	toxin secretion phage lysis holin
GII79_13925	COG3778	Protein conserved in bacteria
GII79_13930	COG3299	homolog of phage Mu protein gp47
GII79_13935	COG3628	GPW Gp25 family protein
GII79_13945	COG4193	domain, Protein
GII79_13950	COG1652	LysM domain
GII79_13955	COG5280	Phage tail tape measure protein TP901
GII79_13955	COG3953	SLT domain
GII79_14015	COG4653	Phage capsid family
GII79_14020	COG0338	D12 class N6 adenine-specific DNA methyltransferase
GII79_14030	COG2369	cell adhesion
GII79_14035	COG5518	Phage portal protein
GII79_14040	COG1783	phage Terminase large subunit
GII79_14045	COG5484	DNA packaging
GII79_14055	COG1335	isochorismatase
GII79_14090	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
GII79_14100	COG1484	DNA-dependent DNA replication
GII79_14105	COG3935	DnaD domain protein
GII79_14110	COG3723	Recombinational DNA repair protein, rece pathway
GII79_14115	COG5377	YqaJ viral recombinase family
GII79_14150	COG3620	sequence-specific DNA binding
GII79_14160	COG0563	adenylate kinase activity
GII79_14165	COG2856	Zn peptidase
GII79_14180	COG5002	protein histidine kinase activity
GII79_14180	COG0642	Histidine kinase
GII79_14185	COG0745	RESPONSE REGULATOR receiver
GII79_14190	COG2311	Membrane
GII79_14200	COG0454	-acetyltransferase
GII79_14205	COG2249	NAD(P)H dehydrogenase (quinone) activity
GII79_14215	COG0730	response to heat
GII79_14220	COG0425	Belongs to the sulfur carrier protein TusA family
GII79_14225	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_14225	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GII79_14235	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GII79_14235	COG0425	Belongs to the sulfur carrier protein TusA family
GII79_14245	COG1937	Protein conserved in bacteria
GII79_14250	COG0662	Cupin 2, conserved barrel domain protein
GII79_14260	COG0789	Transcriptional regulator
GII79_14260	COG4978	Transcriptional regulator
GII79_14265	COG2814	Major facilitator Superfamily
GII79_14270	COG0456	acetyltransferase
GII79_14275	COG1253	flavin adenine dinucleotide binding
GII79_14285	COG0697	spore germination
GII79_14290	COG0583	DNA-binding transcription factor activity
GII79_14295	COG2072	flavoprotein involved in K transport
GII79_14300	COG1230	cation diffusion facilitator family transporter
GII79_14305	COG1942	4-Oxalocrotonate Tautomerase
GII79_14310	COG0583	DNA-binding transcription factor activity
GII79_14320	COG1114	Component of the transport system for branched-chain amino acids
GII79_14325	COG1687	branched-chain amino acid
GII79_14330	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
GII79_14335	COG1522	sequence-specific DNA binding
GII79_14345	COG2124	cytochrome p450
GII79_14350	COG1335	isochorismatase
GII79_14360	COG2318	DinB family
GII79_14370	COG2070	2-Nitropropane dioxygenase
GII79_14375	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
GII79_14385	COG2186	Transcriptional regulator
GII79_14400	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_14405	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GII79_14410	COG3959	Transketolase, thiamine diphosphate binding domain
GII79_14420	COG4978	Transcriptional regulator
GII79_14420	COG0789	Transcriptional regulator
GII79_14425	COG2315	Protein conserved in bacteria
GII79_14435	COG3443	Belongs to the bacterial solute-binding protein 9 family
GII79_14440	COG1595	DNA-templated transcription, initiation
GII79_14445	COG0667	Aldo Keto reductase
GII79_14450	COG2851	Citrate transporter
GII79_14455	COG0583	DNA-binding transcription factor activity
GII79_14460	COG2828	Protein conserved in bacteria
GII79_14465	COG3409	Peptidoglycan-binding domain 1 protein
GII79_14470	COG5566	PFAM Mor transcription activator
GII79_14475	COG0596	Alpha beta hydrolase
GII79_14480	COG4991	sh3 domain protein
GII79_14485	COG4991	sh3 domain protein
GII79_14495	COG0346	lactoylglutathione lyase activity
GII79_14505	COG5577	PFAM Coat F domain
GII79_14510	COG1063	alcohol dehydrogenase
GII79_14520	COG5577	PFAM Coat F domain
GII79_14525	COG0789	Transcriptional regulator
GII79_14535	COG1064	alcohol dehydrogenase
GII79_14540	COG0693	protein deglycase activity
GII79_14545	COG1621	beta-fructofuranosidase activity
GII79_14550	COG3716	PTS system mannose fructose sorbose family IID component
GII79_14555	COG3715	PTS system
GII79_14560	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_14565	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_14570	COG3933	PFAM sigma-54 factor interaction domain-containing protein
GII79_14570	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
GII79_14580	COG1113	amino acid transport
GII79_14585	COG1280	lysine exporter protein (LysE YggA)
GII79_14590	COG1378	Sugar-specific transcriptional regulator TrmB
GII79_14595	COG1595	DNA-templated transcription, initiation
GII79_14615	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GII79_14615	COG2124	cytochrome p450
GII79_14620	COG1309	transcriptional regulator
GII79_14625	COG2226	methyltransferase
GII79_14640	COG2116	formate transmembrane transporter activity
GII79_14645	COG5609	conserved protein (DUF2294)
GII79_14650	COG3383	formate dehydrogenase (NAD+) activity
GII79_14655	COG2427	Protein of unknown function (DUF1641)
GII79_14665	COG0626	cystathionine gamma-synthase activity
GII79_14670	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GII79_14675	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GII79_14680	COG2226	methyltransferase
GII79_14695	COG0768	penicillin binding
GII79_14700	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GII79_14705	COG0572	uridine kinase
GII79_14725	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GII79_14730	COG3906	Belongs to the UPF0473 family
GII79_14735	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GII79_14740	COG4472	Bacterial protein of unknown function (DUF965)
GII79_14745	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GII79_14750	COG0628	permease
GII79_14755	COG1126	abc transporter atp-binding protein
GII79_14760	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GII79_14765	COG0765	amino acid transport
GII79_14770	COG0765	amino acid transport
GII79_14785	COG3881	PFAM PRC-barrel domain
GII79_14790	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
GII79_14795	COG0457	Tetratricopeptide repeat
GII79_14800	COG0482	sulfurtransferase activity
GII79_14805	COG1104	cysteine desulfurase activity
GII79_14810	COG1959	2 iron, 2 sulfur cluster binding
GII79_14815	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
GII79_14820	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
GII79_14830	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GII79_14835	COG0124	histidyl-tRNA synthetase
GII79_14845	COG4991	sh3 domain protein
GII79_14845	COG0860	N-Acetylmuramoyl-L-alanine amidase
GII79_14845	COG3103	Sh3 type 3 domain protein
GII79_14850	COG1490	D-aminoacyl-tRNA deacylase activity
GII79_14855	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GII79_14860	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GII79_14865	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GII79_14865	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
GII79_14870	COG5416	Lipopolysaccharide assembly protein A domain
GII79_14875	COG0490	domain, Protein
GII79_14880	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GII79_14880	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GII79_14890	COG2244	polysaccharide biosynthetic process
GII79_14895	COG2323	membrane
GII79_14905	COG1862	Preprotein translocase
GII79_14910	COG0343	queuine tRNA-ribosyltransferase activity
GII79_14915	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GII79_14925	COG2255	four-way junction helicase activity
GII79_14930	COG0632	four-way junction helicase activity
GII79_14940	COG2814	Major facilitator Superfamily
GII79_14945	COG0673	inositol 2-dehydrogenase activity
GII79_14950	COG2112	serine threonine protein kinase
GII79_14970	COG1115	amino acid carrier protein
GII79_14975	COG0217	transcriptional regulatory protein
GII79_14985	COG1388	LysM domain
GII79_14990	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GII79_14995	COG0157	Belongs to the NadC ModD family
GII79_15000	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
GII79_15005	COG1104	cysteine desulfurase activity
GII79_15010	COG1827	regulation of RNA biosynthetic process
GII79_15015	COG0077	Prephenate dehydratase
GII79_15020	COG4492	Belongs to the UPF0735 family
GII79_15025	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GII79_15030	COG3290	protein histidine kinase activity
GII79_15040	COG0211	Belongs to the bacterial ribosomal protein bL27 family
GII79_15045	COG2868	ribosomal protein
GII79_15050	COG0261	This protein binds to 23S rRNA in the presence of protein L20
GII79_15055	COG1994	Peptidase M50
GII79_15060	COG0739	heme binding
GII79_15065	COG2894	cell division
GII79_15070	COG0850	regulation of cytokinetic process
GII79_15075	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
GII79_15080	COG1792	Involved in formation and maintenance of cell shape
GII79_15085	COG1077	Cell shape determining protein MreB Mrl
GII79_15090	COG2003	Belongs to the UPF0758 family
GII79_15095	COG0424	maF-like protein
GII79_15105	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
GII79_15110	COG0285	dihydrofolate synthase activity
GII79_15115	COG0525	valine-tRNA ligase activity
GII79_15125	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GII79_15130	COG1388	LysM domain
GII79_15135	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
GII79_15140	COG0113	porphobilinogen synthase activity
GII79_15145	COG1587	Uroporphyrinogen-III synthase
GII79_15150	COG0181	hydroxymethylbilane synthase activity
GII79_15155	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GII79_15160	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
GII79_15170	COG0218	Necessary for normal cell division and for the maintenance of normal septation
GII79_15175	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GII79_15180	COG1067	ATP-dependent peptidase activity
GII79_15180	COG0470	DNA polymerase III
GII79_15185	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GII79_15190	COG0544	peptidyl-prolyl cis-trans isomerase activity
GII79_15195	COG1477	protein flavinylation
GII79_15195	COG0457	Tetratricopeptide repeat
GII79_15200	COG0066	3-isopropylmalate dehydratase activity
GII79_15205	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GII79_15210	COG0473	3-isopropylmalate dehydrogenase activity
GII79_15215	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GII79_15220	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GII79_15225	COG0440	acetolactate synthase activity
GII79_15230	COG0028	Belongs to the TPP enzyme family
GII79_15240	COG0454	-acetyltransferase
GII79_15245	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GII79_15255	COG0622	Phosphoesterase
GII79_15260	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GII79_15265	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GII79_15270	COG5401	PFAM Sporulation and spore germination
GII79_15275	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
GII79_15280	COG1846	Transcriptional regulator
GII79_15285	COG2197	response regulator
GII79_15290	COG0824	Thioesterase
GII79_15295	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GII79_15300	COG1053	succinate dehydrogenase
GII79_15305	COG2009	succinate dehydrogenase
GII79_15310	COG1719	4-vinyl reductase, 4VR
GII79_15315	COG0527	aspartate kinase activity
GII79_15320	COG0322	excinuclease ABC activity
GII79_15325	COG3118	belongs to the thioredoxin family
GII79_15330	COG3534	alpha-L-arabinofuranosidase
GII79_15335	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
GII79_15340	COG2086	electron transfer activity
GII79_15345	COG1024	Enoyl-CoA hydratase
GII79_15350	COG1309	transcriptional regulator
GII79_15355	COG0318	PFAM AMP-dependent synthetase and ligase
GII79_15360	COG3766	membrane
GII79_15365	COG1193	negative regulation of DNA recombination
GII79_15370	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
GII79_15370	COG1796	DNA polymerase
GII79_15375	COG1286	toxin biosynthetic process
GII79_15380	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GII79_15385	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GII79_15390	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GII79_15390	COG0072	phenylalanine-tRNA ligase activity
GII79_15395	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GII79_15405	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GII79_15415	COG3835	regulator
GII79_15420	COG0277	FAD linked oxidase domain protein
GII79_15425	COG0247	lactate metabolic process
GII79_15440	COG1966	Carbon starvation protein
GII79_15445	COG3534	alpha-L-arabinofuranosidase
GII79_15450	COG0395	ABC-type sugar transport system, permease component
GII79_15455	COG1175	transmembrane transport
GII79_15460	COG1653	transport
GII79_15465	COG0371	Dehydrogenase
GII79_15470	COG0647	UMP catabolic process
GII79_15475	COG0235	Class ii aldolase
GII79_15480	COG1069	ribulokinase activity
GII79_15485	COG2160	L-arabinose isomerase activity
GII79_15490	COG3507	Belongs to the glycosyl hydrolase 43 family
GII79_15495	COG1363	Peptidase, m42
GII79_15505	COG3326	Membrane
GII79_15510	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GII79_15515	COG0291	Belongs to the bacterial ribosomal protein bL35 family
GII79_15520	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GII79_15530	COG1346	cytolysis
GII79_15535	COG1380	Effector of murein hydrolase LrgA
GII79_15540	COG3279	Response regulator of the LytR AlgR family
GII79_15545	COG3275	phosphorelay sensor kinase activity
GII79_15555	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GII79_15565	COG0398	Pfam SNARE associated Golgi protein
GII79_15570	COG1484	DNA-dependent DNA replication
GII79_15575	COG3611	Membrane attachment protein
GII79_15580	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GII79_15585	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
GII79_15590	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GII79_15595	COG1733	regulation of RNA biosynthetic process
GII79_15600	COG2814	Major facilitator Superfamily
GII79_15605	COG0656	L-ascorbic acid biosynthetic process
GII79_15610	COG0237	dephospho-CoA kinase activity
GII79_15615	COG1971	Probably functions as a manganese efflux pump
GII79_15620	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
GII79_15625	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GII79_15625	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GII79_15630	COG5002	protein histidine kinase activity
GII79_15635	COG0745	RESPONSE REGULATOR receiver
GII79_15640	COG0039	L-malate dehydrogenase activity
GII79_15645	COG0538	isocitrate dehydrogenase activity
GII79_15650	COG0372	Belongs to the citrate synthase family
GII79_15655	COG2707	UPF0756 membrane protein
GII79_15660	COG0628	permease
GII79_15665	COG3030	protein affecting phage T7 exclusion by the F plasmid
GII79_15670	COG0469	pyruvate kinase activity
GII79_15675	COG0205	6-phosphofructokinase activity
GII79_15680	COG0825	malonyl-CoA metabolic process
GII79_15685	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GII79_15690	COG0281	malic enzyme
GII79_15695	COG0587	DNA-directed DNA polymerase activity
GII79_15715	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
GII79_15725	COG4109	DRTGG domain
GII79_15730	COG0730	response to heat
GII79_15735	COG1473	amidohydrolase
GII79_15740	COG0196	riboflavin kinase activity
GII79_15745	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GII79_15750	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
GII79_15755	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GII79_15760	COG1126	abc transporter atp-binding protein
GII79_15765	COG0765	amino acid transport
GII79_15770	COG0765	amino acid transport
GII79_15775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GII79_15780	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GII79_15785	COG0454	-acetyltransferase
GII79_15790	COG0583	DNA-binding transcription factor activity
GII79_15795	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
GII79_15800	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_15810	COG0165	Argininosuccinate lyase
GII79_15815	COG0137	argininosuccinate synthase activity
GII79_15820	COG0521	Mo-molybdopterin cofactor biosynthetic process
GII79_15825	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GII79_15835	COG0827	DNA restriction-modification system
GII79_15840	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GII79_15845	COG3874	Sporulation protein YtfJ
GII79_15855	COG1714	RDD family
GII79_15860	COG0616	signal peptide processing
GII79_15865	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GII79_15870	COG1574	metal-dependent hydrolase with the TIM-barrel fold
GII79_15875	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GII79_15885	COG0301	tRNA thio-modification
GII79_15890	COG1104	cysteine desulfurase activity
GII79_15895	COG1114	Component of the transport system for branched-chain amino acids
GII79_15900	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GII79_15905	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
GII79_15910	COG1309	transcriptional regulator
GII79_15915	COG1956	GAF domain-containing protein
GII79_15920	COG2199	diguanylate cyclase activity
GII79_15920	COG2203	Gaf domain
GII79_15930	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GII79_15935	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GII79_15940	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GII79_15945	COG0454	-acetyltransferase
GII79_15950	COG0517	IMP dehydrogenase activity
GII79_15955	COG0123	including yeast histone deacetylase and acetoin utilization protein
GII79_15960	COG1360	Flagellar Motor Protein
GII79_15965	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
GII79_15970	COG1609	Transcriptional regulator
GII79_15975	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
GII79_15975	COG1605	Chorismate mutase
GII79_15980	COG3118	belongs to the thioredoxin family
GII79_15985	COG4980	gas vesicle protein
GII79_15990	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GII79_15995	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GII79_16000	COG1674	ftsk spoiiie
GII79_16005	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GII79_16010	COG4848	Belongs to the UPF0354 family
GII79_16015	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_16030	COG1363	Peptidase, m42
GII79_16035	COG5584	Small secreted protein
GII79_16040	COG0281	malic enzyme
GII79_16045	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_16050	COG0220	tRNA (guanine-N7-)-methyltransferase activity
GII79_16060	COG0510	thiamine kinase activity
GII79_16065	COG1523	belongs to the glycosyl hydrolase 13 family
GII79_16070	COG1597	lipid kinase activity
GII79_16080	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
GII79_16085	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GII79_16090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GII79_16095	COG2252	PERMEase
GII79_16100	COG4473	ABC transporter
GII79_16105	COG1131	(ABC) transporter
GII79_16110	COG1349	DNA-binding transcription factor activity
GII79_16115	COG1187	pseudouridine synthase activity
GII79_16120	COG2244	polysaccharide biosynthetic process
GII79_16125	COG2081	HI0933 family
GII79_16130	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GII79_16140	COG5578	integral membrane protein
GII79_16145	COG0673	inositol 2-dehydrogenase activity
GII79_16150	COG1653	transport
GII79_16155	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
GII79_16160	COG4209	transmembrane transport
GII79_16165	COG2207	Transcriptional regulator
GII79_16170	COG1653	transport
GII79_16175	COG0395	ABC-type sugar transport system, permease component
GII79_16180	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GII79_16185	COG2124	cytochrome p450
GII79_16190	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
GII79_16200	COG0156	8-amino-7-oxononanoate synthase activity
GII79_16205	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GII79_16215	COG1073	alpha beta
GII79_16240	COG1486	melibiose metabolic process
GII79_16245	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GII79_16250	COG0495	leucyl-tRNA aminoacylation
GII79_16260	COG2202	Pas domain
GII79_16260	COG1366	Belongs to the anti-sigma-factor antagonist family
GII79_16265	COG2814	Major facilitator Superfamily
GII79_16270	COG2433	Pfam Transposase IS66
GII79_16275	COG0577	efflux transmembrane transporter activity
GII79_16280	COG1136	(ABC) transporter
GII79_16285	COG2205	protein histidine kinase activity
GII79_16290	COG0745	RESPONSE REGULATOR receiver
GII79_16295	COG0577	efflux transmembrane transporter activity
GII79_16300	COG1136	(ABC) transporter
GII79_16315	COG1131	(ABC) transporter
GII79_16320	COG1725	Transcriptional regulator
GII79_16335	COG1242	4 iron, 4 sulfur cluster binding
GII79_16340	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GII79_16350	COG2267	carboxylic ester hydrolase activity
GII79_16355	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GII79_16360	COG1113	amino acid transport
GII79_16365	COG0367	asparagine synthase
GII79_16370	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GII79_16375	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
GII79_16385	COG1506	peptidase
GII79_16390	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GII79_16395	COG1116	anion transmembrane transporter activity
GII79_16400	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GII79_16405	COG0494	nUDIX hydrolase
GII79_16410	COG4824	toxin secretion phage lysis holin
GII79_16415	COG0783	Belongs to the Dps family
GII79_16430	COG1854	S-ribosylhomocysteine lyase activity
GII79_16435	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
GII79_16440	COG0288	reversible hydration of carbon dioxide
GII79_16445	COG0254	rRNA binding
GII79_16450	COG1271	oxidase subunit
GII79_16455	COG1294	oxidase, subunit
GII79_16465	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GII79_16470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GII79_16470	COG1321	iron dependent repressor
GII79_16475	COG1121	(ABC) transporter
GII79_16480	COG0803	Belongs to the bacterial solute-binding protein 9 family
GII79_16485	COG4948	Mandelate Racemase Muconate Lactonizing
GII79_16490	COG0318	PFAM AMP-dependent synthetase and ligase
GII79_16495	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
GII79_16500	COG0596	Alpha beta hydrolase
GII79_16505	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
GII79_16510	COG1169	isochorismate synthase
GII79_16515	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GII79_16520	COG1210	Utp--glucose-1-phosphate uridylyltransferase
GII79_16525	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
GII79_16530	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GII79_16535	COG0438	transferase activity, transferring glycosyl groups
GII79_16545	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GII79_16550	COG0438	transferase activity, transferring glycosyl groups
GII79_16555	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GII79_16560	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
GII79_16565	COG0058	SHG alpha-glucan phosphorylase activity
GII79_16570	COG0297	glycogen (starch) synthase activity
GII79_16575	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GII79_16580	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GII79_16585	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GII79_16710	COG3859	Proton-coupled thiamine transporter YuaJ
GII79_16715	COG1247	-acetyltransferase
GII79_16720	COG2268	Band 7 protein
GII79_16725	COG1585	Membrane protein implicated in regulation of membrane protease activity
GII79_16730	COG2318	DinB family
GII79_16740	COG1454	alcohol dehydrogenase
GII79_16750	COG1510	regulation of RNA biosynthetic process
GII79_16760	COG0569	domain protein
GII79_16765	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GII79_16770	COG4682	membrane
GII79_16775	COG1705	Flagellar rod assembly protein muramidase FlgJ
GII79_16780	COG0477	Major facilitator Superfamily
GII79_16785	COG5553	Cysteine dioxygenase type I
GII79_16795	COG1968	undecaprenyl-diphosphatase activity
GII79_16800	COG0628	permease
GII79_16805	COG0673	inositol 2-dehydrogenase activity
GII79_16810	COG4806	L-rhamnose isomerase
GII79_16815	COG3254	rhamnose metabolic process
GII79_16820	COG1070	Carbohydrate kinase
GII79_16825	COG1349	DNA-binding transcription factor activity
GII79_16830	COG3347	Dehydrogenase
GII79_16830	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_16835	COG0840	transmembrane signaling receptor activity
GII79_16840	COG0840	transmembrane signaling receptor activity
GII79_16845	COG0840	transmembrane signaling receptor activity
GII79_16850	COG0840	transmembrane signaling receptor activity
GII79_16870	COG0432	Pfam Uncharacterised protein family UPF0047
GII79_16880	COG0366	Alpha amylase catalytic
GII79_16885	COG1253	flavin adenine dinucleotide binding
GII79_16890	COG2738	Putative neutral zinc metallopeptidase
GII79_16905	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GII79_16920	COG0166	Belongs to the GPI family
GII79_16925	COG1979	alcohol dehydrogenase
GII79_16930	COG1979	alcohol dehydrogenase
GII79_16935	COG2155	Conserved Protein
GII79_16940	COG1098	S1 RNA binding domain
GII79_16945	COG0436	Aminotransferase
GII79_16950	COG1522	sequence-specific DNA binding
GII79_16955	COG2267	carboxylic ester hydrolase activity
GII79_16965	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
GII79_16970	COG2205	protein histidine kinase activity
GII79_16980	COG5018	Exonuclease
GII79_16990	COG2814	Major facilitator Superfamily
GII79_16995	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GII79_17000	COG3011	Protein conserved in bacteria
GII79_17010	COG3290	protein histidine kinase activity
GII79_17015	COG4565	transcriptional regulatory protein
GII79_17040	COG3493	citrate carrier protein
GII79_17050	COG2111	Na H antiporter
GII79_17050	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GII79_17055	COG2111	Na H antiporter
GII79_17060	COG1006	Multisubunit Na H antiporter MnhC subunit
GII79_17065	COG0651	ATP synthesis coupled electron transport
GII79_17070	COG1863	multisubunit Na H antiporter MnhE subunit
GII79_17075	COG2212	antiporter activity
GII79_17080	COG1320	monovalent cation:proton antiporter activity
GII79_17085	COG2050	protein possibly involved in aromatic compounds catabolism
GII79_17090	COG2197	response regulator
GII79_17095	COG4585	Histidine kinase
GII79_17105	COG0142	geranyltranstransferase activity
GII79_17125	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
GII79_17130	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GII79_17135	COG1335	isochorismatase
GII79_17140	COG5506	Protein of unknown function (DUF1694)
GII79_17155	COG0628	permease
GII79_17170	COG1418	mRNA catabolic process
GII79_17175	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_17185	COG1511	domain protein
GII79_17190	COG1674	ftsk spoiiie
GII79_17190	COG0433	COG0433 Predicted ATPase
GII79_17195	COG4499	WXG100 protein secretion system (Wss), protein YukC
GII79_17200	COG5417	Belongs to the EsaB family
GII79_17205	COG4842	Belongs to the WXG100 family
GII79_17210	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
GII79_17210	COG2508	Transcriptional regulator
GII79_17215	COG0686	Belongs to the AlaDH PNT family
GII79_17220	COG5634	Uncharacterized conserved protein (DUF2278)
GII79_17225	COG3251	PFAM MbtH domain protein
GII79_17230	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_17235	COG3433	isochorismatase activity
GII79_17235	COG1535	isochorismatase
GII79_17240	COG1021	2,3-dihydroxybenzoate-AMP ligase
GII79_17245	COG1169	isochorismate synthase
GII79_17250	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_17255	COG2819	hydrolase of the alpha beta superfamily
GII79_17260	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
GII79_17265	COG1268	BioY protein
GII79_17270	COG2056	Na+-H+ antiporter family
GII79_17275	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
GII79_17280	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
GII79_17285	COG3584	3D domain protein
GII79_17300	COG1252	NADH dehydrogenase
GII79_17305	COG0492	ferredoxin-NADP+ reductase activity
GII79_17315	COG0516	GMP reductase activity
GII79_17320	COG2808	Putative FMN-binding domain
GII79_17325	COG0456	acetyltransferase
GII79_17330	COG0316	Belongs to the HesB IscA family
GII79_17335	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GII79_17340	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GII79_17345	COG4844	belongs to the
GII79_17350	COG1252	NADH dehydrogenase
GII79_17355	COG4837	Protein of unknown function (DUF1462)
GII79_17360	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
GII79_17365	COG0823	Involved in the tonB-independent uptake of proteins
GII79_17365	COG4946	Tricorn protease homolog
GII79_17365	COG1506	peptidase
GII79_17370	COG0083	homoserine kinase activity
GII79_17375	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
GII79_17380	COG0460	homoserine dehydrogenase
GII79_17385	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GII79_17390	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GII79_17395	COG0647	UMP catabolic process
GII79_17400	COG2445	Protein of unknown function DUF86
GII79_17405	COG4470	Protein conserved in bacteria
GII79_17415	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GII79_17420	COG0739	heme binding
GII79_17430	COG3377	Domain of unknown function (DUF1805)
GII79_17435	COG0737	Belongs to the 5'-nucleotidase family
GII79_17440	COG0730	response to heat
GII79_17445	COG1801	Protein of unknown function DUF72
GII79_17455	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GII79_17460	COG2508	Transcriptional regulator
GII79_17465	COG2233	PERMEase
GII79_17470	COG2233	PERMEase
GII79_17475	COG3648	Uricase
GII79_17475	COG3195	allantoin biosynthetic process
GII79_17480	COG2351	hydroxyisourate hydrolase activity
GII79_17490	COG2080	2 iron, 2 sulfur cluster binding
GII79_17495	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GII79_17500	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
GII79_17505	COG2068	MobA-Related Protein
GII79_17510	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
GII79_17515	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
GII79_17520	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GII79_17530	COG2356	endonuclease I
GII79_17535	COG3842	ATPase activity
GII79_17540	COG2188	Transcriptional regulator
GII79_17545	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GII79_17550	COG0395	ABC-type sugar transport system, permease component
GII79_17555	COG1175	transmembrane transport
GII79_17560	COG1653	transport
GII79_17565	COG2222	sugar isomerase
GII79_17570	COG0322	excinuclease ABC activity
GII79_17575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GII79_17590	COG0719	Fe-S assembly protein
GII79_17595	COG0822	iron-sulfur transferase activity
GII79_17600	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GII79_17605	COG0719	Fe-S assembly protein
GII79_17610	COG0396	ATPase activity
GII79_17620	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GII79_17625	COG1464	Belongs to the NlpA lipoprotein family
GII79_17630	COG2011	ABC-type metal ion transport system permease component
GII79_17635	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GII79_17645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GII79_17650	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GII79_17660	COG0509	glycine decarboxylation via glycine cleavage system
GII79_17665	COG1393	Belongs to the ArsC family
GII79_17670	COG1960	acyl-CoA dehydrogenase activity
GII79_17675	COG0183	Belongs to the thiolase family
GII79_17680	COG1250	3-hydroxyacyl-CoA dehydrogenase
GII79_17680	COG1024	Enoyl-CoA hydratase
GII79_17690	COG0506	proline dehydrogenase activity
GII79_17700	COG5577	PFAM Coat F domain
GII79_17705	COG1846	Transcriptional regulator
GII79_17710	COG0477	Major facilitator Superfamily
GII79_17715	COG1942	4-Oxalocrotonate Tautomerase
GII79_17720	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_17725	COG0583	DNA-binding transcription factor activity
GII79_17735	COG1120	ATPase activity
GII79_17750	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_17755	COG0783	Belongs to the Dps family
GII79_17760	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GII79_17765	COG0745	RESPONSE REGULATOR receiver
GII79_17770	COG2205	protein histidine kinase activity
GII79_17770	COG2770	Histidine kinase
GII79_17780	COG1309	transcriptional regulator
GII79_17785	COG0114	fumarate hydratase activity
GII79_17795	COG0697	spore germination
GII79_17800	COG0814	amino acid
GII79_17810	COG2197	response regulator
GII79_17815	COG4585	Histidine kinase
GII79_17820	COG4758	membrane
GII79_17825	COG3595	metallopeptidase activity
GII79_17830	COG1842	Phage shock protein A
GII79_17835	COG4758	membrane
GII79_17840	COG2814	Major facilitator Superfamily
GII79_17845	COG2096	Adenosyltransferase
GII79_17850	COG1120	ATPase activity
GII79_17855	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_17860	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GII79_17865	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_17870	COG3386	PFAM SMP-30 Gluconolaconase
GII79_17875	COG2205	protein histidine kinase activity
GII79_17880	COG0745	RESPONSE REGULATOR receiver
GII79_17890	COG1191	sigma factor activity
GII79_17900	COG2140	Oxalate decarboxylase
GII79_17910	COG0577	efflux transmembrane transporter activity
GII79_17915	COG1136	(ABC) transporter
GII79_17920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GII79_17925	COG1120	ATPase activity
GII79_17930	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_17935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GII79_17940	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GII79_17945	COG0531	amino acid
GII79_17955	COG1988	membrane-bound metal-dependent
GII79_17960	COG1368	sulfuric ester hydrolase activity
GII79_17965	COG1910	domain protein
GII79_17970	COG0725	ABC transporter, periplasmic molybdate-binding protein
GII79_17975	COG4149	molybdate abc transporter
GII79_17980	COG0656	L-ascorbic acid biosynthetic process
GII79_17990	COG0025	NhaP-type Na H and K H
GII79_17995	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GII79_18000	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GII79_18005	COG3973	AAA domain
GII79_18015	COG2860	membrane
GII79_18020	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
GII79_18025	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GII79_18030	COG2217	Heavy metal translocating P-type atpase
GII79_18035	COG2217	Heavy metal translocating P-type atpase
GII79_18040	COG2608	mercury ion transmembrane transporter activity
GII79_18045	COG1937	Protein conserved in bacteria
GII79_18050	COG0673	inositol 2-dehydrogenase activity
GII79_18055	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GII79_18060	COG1289	transmembrane transporter activity
GII79_18070	COG2076	Multidrug Resistance protein
GII79_18075	COG1309	transcriptional regulator
GII79_18080	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_18090	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
GII79_18095	COG0557	exoribonuclease II activity
GII79_18100	COG1647	Serine aminopeptidase, S33
GII79_18105	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GII79_18110	COG0596	Alpha beta hydrolase
GII79_18115	COG1476	TRANSCRIPTIONal
GII79_18120	COG1396	sequence-specific DNA binding
GII79_18125	COG1396	sequence-specific DNA binding
GII79_18130	COG1733	regulation of RNA biosynthetic process
GII79_18135	COG0840	transmembrane signaling receptor activity
GII79_18140	COG1174	glycine betaine transport
GII79_18145	COG1732	Glycine betaine
GII79_18150	COG1174	glycine betaine transport
GII79_18155	COG0517	IMP dehydrogenase activity
GII79_18155	COG1125	glycine betaine transport
GII79_18160	COG1510	regulation of RNA biosynthetic process
GII79_18165	COG1174	glycine betaine transport
GII79_18170	COG1732	Glycine betaine
GII79_18175	COG1174	glycine betaine transport
GII79_18180	COG0517	IMP dehydrogenase activity
GII79_18180	COG1125	glycine betaine transport
GII79_18185	COG1510	regulation of RNA biosynthetic process
GII79_18190	COG2095	MarC family integral membrane protein
GII79_18200	COG3064	Membrane
GII79_18205	COG4640	response to antibiotic
GII79_18210	COG0456	acetyltransferase
GII79_18215	COG0148	phosphopyruvate hydratase activity
GII79_18220	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GII79_18225	COG0149	triose-phosphate isomerase activity
GII79_18230	COG0126	phosphoglycerate kinase activity
GII79_18235	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GII79_18240	COG2390	Transcriptional regulator
GII79_18245	COG2814	Major facilitator Superfamily
GII79_18250	COG1609	Transcriptional regulator
GII79_18255	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GII79_18265	COG0583	DNA-binding transcription factor activity
GII79_18270	COG0697	spore germination
GII79_18275	COG1113	amino acid transport
GII79_18280	COG3858	chitin binding
GII79_18285	COG1556	Lactate utilization protein
GII79_18290	COG1139	Iron-sulfur cluster binding protein
GII79_18295	COG0247	lactate metabolic process
GII79_18300	COG2197	response regulator
GII79_18305	COG4585	Histidine kinase
GII79_18310	COG0842	Transport permease protein
GII79_18315	COG1131	(ABC) transporter
GII79_18320	COG0596	Alpha beta hydrolase
GII79_18325	COG2208	phosphoserine phosphatase activity
GII79_18330	COG3867	Arabinogalactan endo-beta-1,4-galactanase
GII79_18335	COG1874	Beta-galactosidase
GII79_18340	COG3833	ABC-type maltose transport systems, permease component
GII79_18345	COG1175	transmembrane transport
GII79_18350	COG2182	Extracellular solute-binding protein
GII79_18355	COG1609	Transcriptional regulator
GII79_18360	COG2186	Transcriptional regulator
GII79_18365	COG1620	l-lactate permease
GII79_18370	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
GII79_18380	COG5039	Polysaccharide pyruvyl transferase
GII79_18385	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GII79_18390	COG0110	maltose O-acetyltransferase activity
GII79_18395	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GII79_18400	COG2244	polysaccharide biosynthetic process
GII79_18405	COG1216	Glycosyl transferase, family 2
GII79_18410	COG5039	Polysaccharide pyruvyl transferase
GII79_18415	COG1216	Glycosyl transferase, family 2
GII79_18425	COG0438	transferase activity, transferring glycosyl groups
GII79_18430	COG1215	transferase activity, transferring glycosyl groups
GII79_18435	COG0438	transferase activity, transferring glycosyl groups
GII79_18440	COG1086	Polysaccharide biosynthesis protein
GII79_18445	COG0489	protein tyrosine kinase activity
GII79_18450	COG3944	biosynthesis protein
GII79_18455	COG1396	sequence-specific DNA binding
GII79_18460	COG2272	Belongs to the type-B carboxylesterase lipase family
GII79_18470	COG3479	Phenolic acid decarboxylase
GII79_18480	COG1794	racemase activity, acting on amino acids and derivatives
GII79_18485	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GII79_18490	COG1621	beta-fructofuranosidase activity
GII79_18495	COG1621	beta-fructofuranosidase activity
GII79_18500	COG0531	amino acid
GII79_18505	COG1309	transcriptional regulator
GII79_18510	COG2076	Multidrug Resistance protein
GII79_18515	COG2076	Multidrug Resistance protein
GII79_18525	COG0277	FAD linked oxidase domain protein
GII79_18530	COG3621	Patatin-like phospholipase
GII79_18540	COG0740	serine-type endopeptidase activity
GII79_18545	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GII79_18550	COG0366	Alpha amylase catalytic
GII79_18555	COG1554	hydrolase, family 65, central catalytic
GII79_18560	COG5521	maltodextrose utilization protein MalA
GII79_18565	COG3833	ABC-type maltose transport systems, permease component
GII79_18570	COG1175	transmembrane transport
GII79_18575	COG2182	Extracellular solute-binding protein
GII79_18580	COG0366	Alpha amylase catalytic
GII79_18585	COG1609	Transcriptional regulator
GII79_18590	COG1611	Belongs to the LOG family
GII79_18595	COG1694	Mazg nucleotide pyrophosphohydrolase
GII79_18600	COG0659	secondary active sulfate transmembrane transporter activity
GII79_18605	COG0288	reversible hydration of carbon dioxide
GII79_18610	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GII79_18615	COG0577	efflux transmembrane transporter activity
GII79_18620	COG1136	(ABC) transporter
GII79_18625	COG5002	protein histidine kinase activity
GII79_18630	COG0745	RESPONSE REGULATOR receiver
GII79_18640	COG2162	N-hydroxyarylamine O-acetyltransferase activity
GII79_18645	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_18650	COG1481	regulation of sporulation
GII79_18655	COG0391	Required for morphogenesis under gluconeogenic growth conditions
GII79_18660	COG1660	Displays ATPase and GTPase activities
GII79_18665	COG1051	belongs to the nudix hydrolase family
GII79_18670	COG0492	ferredoxin-NADP+ reductase activity
GII79_18675	COG0791	NLP P60 protein
GII79_18675	COG3883	PFAM NLP P60 protein
GII79_18680	COG0457	Tetratricopeptide repeat
GII79_18685	COG1132	(ABC) transporter
GII79_18705	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GII79_18705	COG0140	phosphoribosyl-ATP diphosphatase activity
GII79_18710	COG0107	imidazoleglycerol-phosphate synthase activity
GII79_18715	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GII79_18720	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GII79_18725	COG0131	Imidazoleglycerol-phosphate dehydratase
GII79_18730	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GII79_18735	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
GII79_18740	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GII79_18745	COG4990	cell redox homeostasis
GII79_18750	COG5297	Belongs to the glycosyl hydrolase family 6
GII79_18755	COG0110	maltose O-acetyltransferase activity
GII79_18760	COG0546	phosphoglycolate phosphatase activity
GII79_18765	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
GII79_18770	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GII79_18775	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GII79_18780	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
GII79_18785	COG0363	glucosamine-6-phosphate deaminase activity
GII79_18795	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GII79_18800	COG1846	Transcriptional regulator
GII79_18805	COG2124	cytochrome p450
GII79_18815	COG1846	Transcriptional regulator
GII79_18820	COG2814	Major facilitator Superfamily
GII79_18825	COG1950	PFAM Membrane protein of
GII79_18830	COG1983	PspC domain protein
GII79_18835	COG3595	metallopeptidase activity
GII79_18850	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GII79_18855	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GII79_18860	COG0556	nucleotide-excision repair
GII79_18865	COG4897	Protein conserved in bacteria
GII79_18870	COG0574	Belongs to the PEP-utilizing enzyme family
GII79_18870	COG3848	Pyruvate phosphate dikinase
GII79_18875	COG1309	transcriptional regulator
GII79_18880	COG2814	Major facilitator Superfamily
GII79_18885	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GII79_18895	COG0793	Belongs to the peptidase S41A family
GII79_18895	COG3409	Peptidoglycan-binding domain 1 protein
GII79_18900	COG2177	Part of the ABC transporter FtsEX involved in
GII79_18905	COG2884	Cell division ATP-binding protein ftsE
GII79_18910	COG2010	Cytochrome c
GII79_18915	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GII79_18925	COG0653	protein targeting
GII79_18930	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GII79_18945	COG1516	flagellar protein fliS
GII79_18950	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
GII79_18955	COG1334	flagellar protein FlaG
GII79_18960	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GII79_18965	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
GII79_18970	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
GII79_18980	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GII79_18985	COG1256	bacterial-type flagellum assembly
GII79_18985	COG4786	Flagellar basal body rod
GII79_18990	COG3418	PFAM FlgN family protein
GII79_18995	COG2747	anti-sigma28 factor FlgM
GII79_19005	COG1040	competence protein
GII79_19015	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
GII79_19020	COG1307	EDD domain protein, DegV family
GII79_19025	COG2197	response regulator
GII79_19030	COG4585	Histidine kinase
GII79_19035	COG1739	Uncharacterized protein family UPF0029
GII79_19040	COG1316	TRANSCRIPTIONal
GII79_19045	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GII79_19050	COG0438	transferase activity, transferring glycosyl groups
GII79_19055	COG1215	transferase activity, transferring glycosyl groups
GII79_19060	COG3206	protein involved in exopolysaccharide biosynthesis
GII79_19065	COG3307	-O-antigen
GII79_19070	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
GII79_19075	COG0438	transferase activity, transferring glycosyl groups
GII79_19075	COG0297	glycogen (starch) synthase activity
GII79_19080	COG2244	polysaccharide biosynthetic process
GII79_19095	COG2247	cell wall binding repeat
GII79_19095	COG0860	N-Acetylmuramoyl-L-alanine amidase
GII79_19100	COG2247	cell wall binding repeat
GII79_19100	COG2385	sporulation resulting in formation of a cellular spore
GII79_19110	COG1316	TRANSCRIPTIONal
GII79_19115	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
GII79_19135	COG1210	Utp--glucose-1-phosphate uridylyltransferase
GII79_19140	COG1134	teichoic acid transport
GII79_19145	COG1682	transport, permease protein
GII79_19160	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
GII79_19160	COG1215	transferase activity, transferring glycosyl groups
GII79_19165	COG0463	Glycosyl transferase, family 2
GII79_19210	COG4193	domain, Protein
GII79_19215	COG1482	cell wall glycoprotein biosynthetic process
GII79_19220	COG0697	spore germination
GII79_19225	COG0814	amino acid
GII79_19235	COG2814	Major facilitator Superfamily
GII79_19240	COG1316	TRANSCRIPTIONal
GII79_19245	COG0561	phosphatase activity
GII79_19250	COG0791	NLP P60 protein
GII79_19260	COG2843	Capsule synthesis protein
GII79_19270	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GII79_19275	COG1609	Transcriptional regulator
GII79_19280	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GII79_19285	COG1869	D-ribose catabolic process
GII79_19290	COG1129	ABC transporter
GII79_19295	COG1172	Belongs to the binding-protein-dependent transport system permease family
GII79_19300	COG1879	ABC-type sugar transport system periplasmic component
GII79_19305	COG3103	Sh3 type 3 domain protein
GII79_19315	COG2249	NAD(P)H dehydrogenase (quinone) activity
GII79_19320	COG3527	Alpha-acetolactate decarboxylase
GII79_19325	COG0028	Belongs to the TPP enzyme family
GII79_19330	COG0583	DNA-binding transcription factor activity
GII79_19335	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GII79_19350	COG5337	Spore coat protein CotH
GII79_19360	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GII79_19370	COG0405	Gamma-glutamyltransferase
GII79_19375	COG1522	sequence-specific DNA binding
GII79_19380	COG2059	Chromate
GII79_19385	COG2059	Chromate
GII79_19395	COG0655	NAD(P)H dehydrogenase (quinone) activity
GII79_19400	COG0583	DNA-binding transcription factor activity
GII79_19430	COG5444	nuclease activity
GII79_19450	COG3878	Protein conserved in bacteria
GII79_19455	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
GII79_19460	COG4464	protein tyrosine phosphatase activity
GII79_19465	COG0489	protein tyrosine kinase activity
GII79_19470	COG3944	biosynthesis protein
GII79_19480	COG4715	Zinc finger, swim domain protein
GII79_19485	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GII79_19490	COG0561	phosphatase activity
GII79_19495	COG1349	DNA-binding transcription factor activity
GII79_19500	COG0629	single-stranded DNA binding
GII79_19515	COG3764	Sortase (surface protein transpeptidase)
GII79_19520	COG2972	Histidine kinase
GII79_19520	COG0745	RESPONSE REGULATOR receiver
GII79_19525	COG1970	mechanosensitive ion channel activity
GII79_19530	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GII79_19535	COG0457	Tetratricopeptide repeat
GII79_19540	COG4786	Flagellar basal body rod
GII79_19545	COG4786	Flagellar basal body rod
GII79_19550	COG1077	Cell shape determining protein MreB Mrl
GII79_19555	COG1609	Transcriptional regulator
GII79_19565	COG1846	Transcriptional regulator
GII79_19570	COG2814	Major facilitator Superfamily
GII79_19575	COG3420	alginic acid biosynthetic process
GII79_19580	COG1953	Uracil, thiamine, allantoin
GII79_19585	COG0477	Major facilitator Superfamily
GII79_19590	COG1335	isochorismatase
GII79_19600	COG0004	ammonium transporteR
GII79_19605	COG0347	Belongs to the P(II) protein family
GII79_19610	COG0671	phosphoesterase, PA-phosphatase related
GII79_19620	COG0739	heme binding
GII79_19625	COG1247	-acetyltransferase
GII79_19645	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GII79_19650	COG0789	Transcriptional regulator
GII79_19660	COG2910	NAD(P)H-binding
GII79_19665	COG1959	2 iron, 2 sulfur cluster binding
GII79_19670	COG0804	urea catabolic process
GII79_19675	COG0832	Belongs to the urease beta subunit family
GII79_19680	COG0831	urea catabolic process
GII79_19695	COG3237	CsbD-like
GII79_19700	COG1994	Peptidase M50
GII79_19705	COG0457	Tetratricopeptide repeat
GII79_19710	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GII79_19715	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GII79_19725	COG2304	oxidoreductase activity
GII79_19735	COG2304	oxidoreductase activity
GII79_19740	COG2385	sporulation resulting in formation of a cellular spore
GII79_19745	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GII79_19755	COG4836	Membrane
GII79_19765	COG0355	proton-transporting ATP synthase activity, rotational mechanism
GII79_19770	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GII79_19775	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GII79_19780	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GII79_19785	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GII79_19790	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GII79_19795	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GII79_19800	COG0356	it plays a direct role in the translocation of protons across the membrane
GII79_19810	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GII79_19815	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GII79_19820	COG4475	Protein of unknown function (DUF436)
GII79_19825	COG0698	ribose 5-phosphate isomerase
GII79_19830	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GII79_19835	COG1971	Probably functions as a manganese efflux pump
GII79_19840	COG0009	L-threonylcarbamoyladenylate synthase
GII79_19845	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
GII79_19865	COG2890	protein-(glutamine-N5) methyltransferase activity
GII79_19870	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GII79_19875	COG0346	lactoylglutathione lyase activity
GII79_19880	COG0789	Transcriptional regulator
GII79_19885	COG0679	Auxin Efflux Carrier
GII79_19890	COG0281	malic enzyme
GII79_19895	COG1435	thymidine kinase activity
GII79_19900	COG0254	rRNA binding
GII79_19905	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GII79_19915	COG1494	fructose-1,6-bisphosphatase
GII79_19920	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GII79_19925	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GII79_19930	COG0191	fructose-bisphosphate aldolase activity
GII79_19935	COG2204	response regulator
GII79_19940	COG4821	SIS domain
GII79_19945	COG0504	CTP synthase activity
GII79_19950	COG3343	RNA polymerase activity
GII79_19955	COG1960	acyl-CoA dehydrogenase activity
GII79_19960	COG0247	lactate metabolic process
GII79_19960	COG2181	nitrate reductase activity
GII79_19965	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GII79_19970	COG4294	response to UV
GII79_19980	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GII79_19985	COG1132	(ABC) transporter
GII79_19990	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GII79_20000	COG2181	nitrate reductase activity
GII79_20005	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
GII79_20010	COG1140	nitrate reductase beta subunit
GII79_20015	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GII79_20020	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GII79_20030	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GII79_20035	COG2223	nitrite transmembrane transporter activity
GII79_20040	COG0018	arginyl-trna synthetase
GII79_20045	COG4506	Protein conserved in bacteria
GII79_20060	COG0535	radical SAM domain protein
GII79_20070	COG1131	(ABC) transporter
GII79_20075	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
GII79_20080	COG0612	Peptidase, M16
GII79_20085	COG0612	Peptidase, M16
GII79_20095	COG3391	amine dehydrogenase activity
GII79_20100	COG3391	amine dehydrogenase activity
GII79_20110	COG0457	Tetratricopeptide repeat
GII79_20140	COG1131	(ABC) transporter
GII79_20150	COG0010	Belongs to the arginase family
GII79_20155	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GII79_20160	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GII79_20170	COG1994	Peptidase M50
GII79_20175	COG1942	4-Oxalocrotonate Tautomerase
GII79_20180	COG1846	Transcriptional regulator
GII79_20185	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GII79_20190	COG0477	Major facilitator Superfamily
GII79_20195	COG1959	2 iron, 2 sulfur cluster binding
GII79_20200	COG3465	dGTPase activity
GII79_20205	COG1078	dGTPase activity
GII79_20210	COG4844	belongs to the
GII79_20220	COG0697	spore germination
GII79_20225	COG0095	Lipoate-protein ligase
GII79_20230	COG0583	DNA-binding transcription factor activity
GII79_20235	COG0280	phosphate acetyltransferase
GII79_20245	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_20250	COG0436	Aminotransferase
GII79_20255	COG2814	Major facilitator Superfamily
GII79_20260	COG0151	Belongs to the GarS family
GII79_20265	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_20270	COG1917	Cupin 2, conserved barrel domain protein
GII79_20275	COG0077	Prephenate dehydratase
GII79_20280	COG2814	Major facilitator Superfamily
GII79_20285	COG0833	amino acid
GII79_20290	COG4187	Peptidase family M20/M25/M40
GII79_20295	COG1012	belongs to the aldehyde dehydrogenase family
GII79_20300	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GII79_20310	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
GII79_20315	COG1091	dTDP-4-dehydrorhamnose reductase activity
GII79_20320	COG1088	dTDP-glucose 4,6-dehydratase activity
GII79_20325	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GII79_20330	COG3980	spore coat polysaccharide biosynthesis protein
GII79_20335	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
GII79_20340	COG2089	acid synthase
GII79_20345	COG0456	acetyltransferase
GII79_20350	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GII79_20355	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
GII79_20360	COG0463	Glycosyl transferase, family 2
GII79_20370	COG2363	Small membrane protein
GII79_20375	COG2233	PERMEase
GII79_20390	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GII79_20395	COG1216	Glycosyl transferase, family 2
GII79_20400	COG0351	phosphomethylpyrimidine kinase
GII79_20410	COG1621	beta-fructofuranosidase activity
GII79_20415	COG1263	PTS System
GII79_20415	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_20420	COG2116	formate transmembrane transporter activity
GII79_20425	COG3711	transcriptional antiterminator
GII79_20435	COG1404	Belongs to the peptidase S8 family
GII79_20440	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GII79_20445	COG0778	Nitroreductase
GII79_20450	COG0772	Belongs to the SEDS family
GII79_20460	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GII79_20465	COG1845	cytochrome c oxidase, subunit III
GII79_20470	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GII79_20475	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GII79_20480	COG2261	transglycosylase associated protein
GII79_20485	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
GII79_20490	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GII79_20495	COG2246	polysaccharide biosynthetic process
GII79_20500	COG1309	transcriptional regulator
GII79_20510	COG3162	membrane
GII79_20515	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GII79_20520	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
GII79_20525	COG2837	iron assimilation
GII79_20530	COG2822	iron ion transport
GII79_20535	COG0672	)-iron permease
GII79_20540	COG0352	thiamine-phosphate diphosphorylase activity
GII79_20545	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GII79_20550	COG0583	DNA-binding transcription factor activity
GII79_20555	COG1380	Effector of murein hydrolase LrgA
GII79_20560	COG1346	cytolysis
GII79_20565	COG2814	Major facilitator Superfamily
GII79_20570	COG4895	conserved protein (DUF2196)
GII79_20575	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
GII79_20580	COG0346	lactoylglutathione lyase activity
GII79_20585	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GII79_20590	COG1404	Belongs to the peptidase S8 family
GII79_20595	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_20595	COG1263	PTS System
GII79_20600	COG3711	transcriptional antiterminator
GII79_20605	COG1442	glycosyl transferase family 8
GII79_20610	COG5522	Integral membrane protein (intg_mem_TP0381)
GII79_20615	COG1846	Transcriptional regulator
GII79_20620	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GII79_20625	COG2234	aminopeptidase activity
GII79_20645	COG2357	RelA SpoT domain protein
GII79_20650	COG1575	Belongs to the MenA family. Type 1 subfamily
GII79_20665	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GII79_20670	COG1696	Membrane protein involved in D-alanine export
GII79_20675	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GII79_20680	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GII79_20685	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
GII79_20690	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GII79_20695	COG1486	melibiose metabolic process
GII79_20700	COG1447	Phosphotransferase system cellobiose-specific component IIA
GII79_20705	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GII79_20710	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GII79_20715	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GII79_20715	COG3711	transcriptional antiterminator
GII79_20725	COG2094	Belongs to the DNA glycosylase MPG family
GII79_20730	COG0753	catalase activity
GII79_20740	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
GII79_20745	COG1131	(ABC) transporter
GII79_20765	COG1595	DNA-templated transcription, initiation
GII79_20770	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
GII79_20775	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
GII79_20780	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GII79_20785	COG4988	ABC transporter
GII79_20790	COG1294	oxidase, subunit
GII79_20795	COG1271	oxidase subunit
GII79_20800	COG3493	citrate carrier protein
GII79_20805	COG0501	Belongs to the peptidase M48B family
GII79_20815	COG0726	polysaccharide deacetylase
GII79_20820	COG3842	ATPase activity
GII79_20825	COG2508	Transcriptional regulator
GII79_20830	COG1012	belongs to the aldehyde dehydrogenase family
GII79_20835	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GII79_20845	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
GII79_20850	COG1881	PFAM PEBP family protein
GII79_20855	COG0583	DNA-binding transcription factor activity
GII79_20865	COG4585	Histidine kinase
GII79_20870	COG2197	response regulator
GII79_20875	COG2195	Cleaves the N-terminal amino acid of tripeptides
GII79_20885	COG4894	glucomannan catabolic process
GII79_20890	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GII79_20895	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GII79_20900	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_20905	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GII79_20910	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GII79_20915	COG2610	gluconate transmembrane transporter activity
GII79_20920	COG0500	methyltransferase
GII79_20925	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GII79_20940	COG0753	catalase activity
GII79_20940	COG0693	protein deglycase activity
GII79_20945	COG2851	Citrate transporter
GII79_20950	COG2273	Hydrolase Family 16
GII79_20955	COG3711	transcriptional antiterminator
GII79_20965	COG2270	Major facilitator Superfamily
GII79_20970	COG0513	Belongs to the DEAD box helicase family
GII79_20975	COG3401	FG-GAP repeat protein
GII79_20975	COG2755	lipolytic protein G-D-S-L family
GII79_21005	COG0697	spore germination
GII79_21010	COG0589	response to stress
GII79_21015	COG2723	6-phospho-beta-galactosidase activity
GII79_21020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_21020	COG1263	PTS System
GII79_21020	COG2190	(PTS) system
GII79_21035	COG5444	nuclease activity
GII79_21050	COG3507	Belongs to the glycosyl hydrolase 43 family
GII79_21065	COG2986	histidine ammonia-lyase
GII79_21070	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
GII79_21075	COG1228	amidohydrolase
GII79_21080	COG0010	Belongs to the arginase family
GII79_21085	COG0833	amino acid
GII79_21090	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
GII79_21095	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GII79_21100	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GII79_21105	COG2390	Transcriptional regulator
GII79_21115	COG3192	ethanolamine utilization protein
GII79_21120	COG2079	MmgE PrpD family protein
GII79_21130	COG1126	abc transporter atp-binding protein
GII79_21135	COG0765	amino acid transport
GII79_21140	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GII79_21160	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
GII79_21165	COG0561	phosphatase activity
GII79_21195	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GII79_21200	COG5294	Protein conserved in bacteria
GII79_21205	COG0577	efflux transmembrane transporter activity
GII79_21210	COG1136	(ABC) transporter
GII79_21215	COG2205	protein histidine kinase activity
GII79_21220	COG0745	RESPONSE REGULATOR receiver
GII79_21225	COG0191	fructose-bisphosphate aldolase activity
GII79_21230	COG1082	Xylose isomerase domain protein TIM barrel
GII79_21235	COG1082	Xylose isomerase domain protein TIM barrel
GII79_21240	COG0673	inositol 2-dehydrogenase activity
GII79_21245	COG2814	Major facilitator Superfamily
GII79_21250	COG1082	Xylose isomerase domain protein TIM barrel
GII79_21255	COG3962	Belongs to the TPP enzyme family
GII79_21260	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GII79_21270	COG1012	belongs to the aldehyde dehydrogenase family
GII79_21275	COG1349	DNA-binding transcription factor activity
GII79_21280	COG0667	Aldo Keto reductase
GII79_21295	COG2814	Major facilitator Superfamily
GII79_21300	COG0326	Molecular chaperone. Has ATPase activity
GII79_21310	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_21315	COG1309	transcriptional regulator
GII79_21320	COG1012	belongs to the aldehyde dehydrogenase family
GII79_21325	COG1714	RDD family
GII79_21330	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GII79_21340	COG1714	RDD family
GII79_21345	COG2311	Membrane
GII79_21350	COG1917	Cupin 2, conserved barrel domain protein
GII79_21355	COG1309	transcriptional regulator
GII79_21360	COG1028	Short-chain dehydrogenase reductase Sdr
GII79_21365	COG1846	Transcriptional regulator
GII79_21370	COG1380	Effector of murein hydrolase LrgA
GII79_21375	COG1346	cytolysis
GII79_21380	COG5039	Polysaccharide pyruvyl transferase
GII79_21385	COG1929	Belongs to the glycerate kinase type-1 family
GII79_21390	COG1802	Transcriptional regulator
GII79_21395	COG1070	Carbohydrate kinase
GII79_21400	COG2610	gluconate transmembrane transporter activity
GII79_21405	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GII79_21410	COG0450	alkyl hydroperoxide reductase
GII79_21415	COG3634	alkyl hydroperoxide reductase activity
GII79_21425	COG2723	6-phospho-beta-galactosidase activity
GII79_21430	COG2190	(PTS) system
GII79_21435	COG1263	PTS System
GII79_21435	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GII79_21435	COG2190	(PTS) system
GII79_21440	COG2188	Transcriptional regulator
GII79_21450	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
GII79_21485	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GII79_21500	COG1063	alcohol dehydrogenase
GII79_21520	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
GII79_21525	COG0456	acetyltransferase
GII79_21530	COG0457	Tetratricopeptide repeat
GII79_21540	COG0010	Belongs to the arginase family
GII79_21545	COG0833	amino acid
GII79_21550	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GII79_21555	COG3829	transcription factor binding
GII79_21560	COG5002	protein histidine kinase activity
GII79_21585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GII79_21590	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
GII79_21595	COG4853	Protein conserved in bacteria
GII79_21600	COG4863	YycH protein
GII79_21605	COG5002	protein histidine kinase activity
GII79_21610	COG0745	RESPONSE REGULATOR receiver
GII79_21640	COG0346	lactoylglutathione lyase activity
GII79_21645	COG0305	Participates in initiation and elongation during chromosome replication
GII79_21660	COG3093	addiction module antidote protein HigA
GII79_21665	COG2807	transmembrane transport
GII79_21670	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GII79_21675	COG0359	binds to the 23S rRNA
GII79_21680	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
GII79_21685	COG4241	membrane
GII79_21695	COG5577	PFAM Coat F domain
GII79_21700	COG1733	regulation of RNA biosynthetic process
GII79_21705	COG1227	inorganic diphosphatase activity
GII79_21720	COG2271	Major facilitator Superfamily
GII79_21725	COG0789	Transcriptional regulator
GII79_21725	COG4978	Transcriptional regulator
GII79_21735	COG4319	ketosteroid isomerase
GII79_21740	COG1357	PFAM Pentapeptide repeats (8 copies)
GII79_21745	COG2814	Major facilitator Superfamily
GII79_21750	COG0583	DNA-binding transcription factor activity
GII79_21755	COG2153	protein acetylation
GII79_21765	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GII79_21770	COG1846	Transcriptional regulator
GII79_21775	COG2153	protein acetylation
GII79_21780	COG2364	Membrane
GII79_21785	COG0456	acetyltransferase
GII79_21790	COG2315	Protein conserved in bacteria
GII79_21795	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GII79_21805	COG2814	Major facilitator Superfamily
GII79_21815	COG1331	Highly conserved protein containing a thioredoxin domain
GII79_21830	COG0789	Transcriptional regulator
GII79_21835	COG0697	spore germination
GII79_21845	COG1280	lysine exporter protein (LysE YggA)
GII79_21850	COG1331	Highly conserved protein containing a thioredoxin domain
GII79_21855	COG1331	Highly conserved protein containing a thioredoxin domain
GII79_21860	COG1266	CAAX protease self-immunity
GII79_21865	COG2814	Major facilitator Superfamily
GII79_21865	COG0477	Major facilitator Superfamily
GII79_21870	COG0110	maltose O-acetyltransferase activity
GII79_21875	COG0346	lactoylglutathione lyase activity
GII79_21880	COG1609	Transcriptional regulator
GII79_21885	COG0708	Exodeoxyribonuclease III
GII79_21890	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GII79_21895	COG0629	single-stranded DNA binding
GII79_21900	COG0360	Binds together with S18 to 16S ribosomal RNA
GII79_21905	COG0012	GTP binding
GII79_21910	COG0243	molybdopterin cofactor binding
GII79_21915	COG4481	Protein conserved in bacteria
GII79_21920	COG3949	Membrane
GII79_21930	COG1475	DNA binding
GII79_21935	COG1192	Involved in chromosome partitioning
GII79_21945	COG1475	DNA binding
GII79_21950	COG0357	Ribosomal RNA small subunit methyltransferase G
GII79_21955	COG0445	tRNA wobble uridine modification
GII79_21960	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GII79_21965	COG1847	R3H domain protein
GII79_21970	COG0706	membrane insertase activity
GII79_21975	COG0594	ribonuclease P activity
GII79_21980	COG0230	Belongs to the bacterial ribosomal protein bL34 family